Sample records for survival simulator simulates

  1. Simulations

    CERN Document Server

    Ngada, Narcisse


    The complexity and cost of building and running high-power electrical systems make the use of simulations unavoidable. The simulations available today provide great understanding about how systems really operate. This paper helps the reader to gain an insight into simulation in the field of power converters for particle accelerators. Starting with the definition and basic principles of simulation, two simulation types, as well as their leading tools, are presented: analog and numerical simulations. Some practical applications of each simulation type are also considered. The final conclusion then summarizes the main important items to keep in mind before opting for a simulation tool or before performing a simulation.

  2. Cell survival in a simulated Mars environment (United States)

    Todd, Paul; Kurk, Michael Andy; Boland, Eugene; Thomas, David


    The most ancient life forms on earth date back comfortably to the time when liquid water was believed to be abundant on Mars. These ancient life forms include cyanobacteria, contemporary autotrophic earth organisms believed to have descended from ancestors present as long as 3.5 billion years ago. Contemporary cyanobacteria have adapted to the earth environment's harshest conditions (long-term drying, high and low temperature), and, being autotrophic, they are among the most likely life forms to withstand space travel and the Mars environment. However, it is unlikely that humans would unwittingly contaminate a planetary spacecraft with these microbes. One the other hand, heterotrophic microbes that co-habit with humans are more likely spacecraft contaminants, as history attests. Indeed, soil samples from the Atacama desert have yielded colony-forming organisms resembling enteric bacteria. There is a need to understand the survivability of cyanobacteria (likely survivors, unlikely contaminants) and heterotrophic eubacteria (unlikely survivors, likely contaminants) under simulated planetary conditions. A 35-day test was performed in a commercial planetary simulation system (Techshot, Inc., Greenville, IN) in which the minimum night-time temperature was -80 C, the maximum daytime temperature was +26 C, the simulated day-night light cycle in earth hours was 12-on and 12-off, and the total pressure of the pure CO _{2} atmosphere was maintained below 11 mbar. Any water present was allowed to equilibrate with the changing temperature and pressure. The gas phase was sampled into a CR1-A low-pressure hygrometer (Buck Technologies, Boulder, CO), and dew/frost point was measured once every hour and recorded on a data logger, along with the varying temperature in the chamber, from which the partial pressure of water was calculated. According to measurements there was no liquid water present throughout the test except during the initial pump-down period when aqueous specimens

  3. Simulation

    DEFF Research Database (Denmark)

    Gould, Derek A; Chalmers, Nicholas; Johnson, Sheena J


    Recognition of the many limitations of traditional apprenticeship training is driving new approaches to learning medical procedural skills. Among simulation technologies and methods available today, computer-based systems are topical and bring the benefits of automated, repeatable, and reliable...... performance assessments. Human factors research is central to simulator model development that is relevant to real-world imaging-guided interventional tasks and to the credentialing programs in which it would be used....

  4. Simulation

    CERN Document Server

    Ross, Sheldon


    Ross's Simulation, Fourth Edition introduces aspiring and practicing actuaries, engineers, computer scientists and others to the practical aspects of constructing computerized simulation studies to analyze and interpret real phenomena. Readers learn to apply results of these analyses to problems in a wide variety of fields to obtain effective, accurate solutions and make predictions about future outcomes. This text explains how a computer can be used to generate random numbers, and how to use these random numbers to generate the behavior of a stochastic model over time. It presents the statist

  5. Survival of B. longum Bb-46 in simulated gastrointestinal fluids

    CSIR Research Space (South Africa)

    Thantsha, MS


    Full Text Available Gastric acidity is the main factor affecting viability of probiotics in the gastrointestinal tract (GIT). This study investigated the survival in simulated gastrointestinal fluids of Bifidobacterium longum Bb-46 encapsulated in interpolymer...

  6. A Simulation Platform for Quantifying Survival Bias

    DEFF Research Database (Denmark)

    Mayeda, Elizabeth Rose; Tchetgen Tchetgen, Eric J; Power, Melinda C


    Bias due to selective mortality is a potential concern in many studies and is especially relevant in cognitive aging research because cognitive impairment strongly predicts subsequent mortality. Biased estimation of the effect of an exposure on rate of cognitive decline can occur when mortality i......-mortality situations. This simulation platform provides a flexible tool for evaluating biases in studies with high mortality, as is common in cognitive aging research.......Bias due to selective mortality is a potential concern in many studies and is especially relevant in cognitive aging research because cognitive impairment strongly predicts subsequent mortality. Biased estimation of the effect of an exposure on rate of cognitive decline can occur when mortality...... is a common effect of exposure and an unmeasured determinant of cognitive decline and in similar settings. This potential is often represented as collider-stratification bias in directed acyclic graphs, but it is difficult to anticipate the magnitude of bias. In this paper, we present a flexible simulation...

  7. Improving the survival of probiotic in simulated conditions and ...

    African Journals Online (AJOL)

    Materials and Methods: Modified citrus pectin-alginate microbeads containing Lactobacillus acidophilus ATCC 4356 was developed. Efficiency of the microbeads was evaluated in simulated conditions of the gastrointestinal tract and in Balb/c mice induced with colon tumor. Genomic identification of faecal lactobacilli ...

  8. Modeling of pathogen survival during simulated gastric digestion. (United States)

    Koseki, Shige; Mizuno, Yasuko; Sotome, Itaru


    The objective of the present study was to develop a mathematical model of pathogenic bacterial inactivation kinetics in a gastric environment in order to further understand a part of the infectious dose-response mechanism. The major bacterial pathogens Listeria monocytogenes, Escherichia coli O157:H7, and Salmonella spp. were examined by using simulated gastric fluid adjusted to various pH values. To correspond to the various pHs in a stomach during digestion, a modified logistic differential equation model and the Weibull differential equation model were examined. The specific inactivation rate for each pathogen was successfully described by a square-root model as a function of pH. The square-root models were combined with the modified logistic differential equation to obtain a complete inactivation curve. Both the modified logistic and Weibull models provided a highly accurate fitting of the static pH conditions for every pathogen. However, while the residuals plots of the modified logistic model indicated no systematic bias and/or regional prediction problems, the residuals plots of the Weibull model showed a systematic bias. The modified logistic model appropriately predicted the pathogen behavior in the simulated gastric digestion process with actual food, including cut lettuce, minced tuna, hamburger, and scrambled egg. Although the developed model enabled us to predict pathogen inactivation during gastric digestion, its results also suggested that the ingested bacteria in the stomach would barely be inactivated in the real digestion process. The results of this study will provide important information on a part of the dose-response mechanism of bacterial pathogens.

  9. Modeling of Pathogen Survival during Simulated Gastric Digestion ▿ (United States)

    Koseki, Shige; Mizuno, Yasuko; Sotome, Itaru


    The objective of the present study was to develop a mathematical model of pathogenic bacterial inactivation kinetics in a gastric environment in order to further understand a part of the infectious dose-response mechanism. The major bacterial pathogens Listeria monocytogenes, Escherichia coli O157:H7, and Salmonella spp. were examined by using simulated gastric fluid adjusted to various pH values. To correspond to the various pHs in a stomach during digestion, a modified logistic differential equation model and the Weibull differential equation model were examined. The specific inactivation rate for each pathogen was successfully described by a square-root model as a function of pH. The square-root models were combined with the modified logistic differential equation to obtain a complete inactivation curve. Both the modified logistic and Weibull models provided a highly accurate fitting of the static pH conditions for every pathogen. However, while the residuals plots of the modified logistic model indicated no systematic bias and/or regional prediction problems, the residuals plots of the Weibull model showed a systematic bias. The modified logistic model appropriately predicted the pathogen behavior in the simulated gastric digestion process with actual food, including cut lettuce, minced tuna, hamburger, and scrambled egg. Although the developed model enabled us to predict pathogen inactivation during gastric digestion, its results also suggested that the ingested bacteria in the stomach would barely be inactivated in the real digestion process. The results of this study will provide important information on a part of the dose-response mechanism of bacterial pathogens. PMID:21131530

  10. Studies on the survival of Ascaris suum eggs under laboratory and simulated field conditions

    NARCIS (Netherlands)

    Gaasenbeek, C.P.H.; Borgsteede, F.H.M.


    A series of four experiments was carried out to study the survival of Ascaris suum eggs: in a pig slurry unit on a farm, in the laboratory under anaerobic conditions and different relative humidities (rH), and under simulated field conditions. Survival of eggs in the pig slurry unit was 20% after

  11. Simulation Fidelity Issues for Nuclear Survivability Validation Protocols. (United States)




    Directory of Open Access Journals (Sweden)

    O. M. Gibalenko


    Full Text Available Purpose. The research is aimed at improving the quality and reliability of measures of primary and secondary protection of metal structures at manufacturing companies, to prolong the service life of cyclically loaded structures of production facilities taking into account the corrosion level of danger. Methodology. Authors proposed to use the principles of process approach for statement and realization of management problems of operational service life in corrosion environments. The principles of ensuring reliability on the level of corrosion danger include justification of stages sequence for survivability assessment of a structural metalwork based on the strategy of DMAIC (define, measure, analyze, improve, control: definitions, measurements, analysis, improvement and monitoring of measures of primary and secondary corrosion protection. Findings. Providing control measures from corrosion according to the criterion of corrosion danger allows providing requirements of reliability of structural metalwork based on calculated provisions of the limiting conditions method and solving the problems of management in technological safety during the expected service life of structural objects. Originality. The developed strategy of maintenance of the industrial facilities on an actual state includes the process approach to resource management by creation of system for the account and the functional controlling, risk analysis and regulation of technological safety in production facilities of the enterprises. Realization of the principles of process approach to management of technological safety at the object level is directed to perfecting of tools and methods of anticorrosive protection, extension of a resource taking into account indexes of survivability (, and justification of program measures to ensure the reliability of enterprises(PER. Practical value. On the basis of process approach to quality and reliability management, generalizations of the

  13. Cognitive Performance during a 24-Hour Cold Exposure Survival Simulation

    Directory of Open Access Journals (Sweden)

    Michael J. Taber


    Full Text Available Survivor of a ship ground in polar regions may have to wait more than five days before being rescued. Therefore, the purpose of this study was to explore cognitive performance during prolonged cold exposure. Core temperature (Tc and cognitive test battery (CTB performance data were collected from eight participants during 24 hours of cold exposure (7.5°C ambient air temperature. Participants (recruited from those who have regular occupational exposure to cold were instructed that they could freely engage in minimal exercise that was perceived to maintaining a tolerable level of thermal comfort. Despite the active engagement, test conditions were sufficient to significantly decrease Tc after exposure and to eliminate the typical 0.5–1.0°C circadian rise and drop in core temperature throughout a 24 h cycle. Results showed minimal changes in CTB performance regardless of exposure time. Based on the results, it is recommended that survivors who are waiting for rescue should be encouraged to engage in mild physical activity, which could have the benefit of maintaining metabolic heat production, improve motivation, and act as a distractor from cold discomfort. This recommendation should be taken into consideration during future research and when considering guidelines for mandatory survival equipment regarding cognitive performance.

  14. Effects of sediment transport on survival of salmonid embryos in a natural stream: A simulation approach (United States)

    Thomas E. Lisle; Jack Lewis


    A model is presented that simulates the effects of streamflow and sediment transport on survival of salmonid embryos incubating in spawning gravels in a natural channel. Components of the model include a 6-yr streamflow record, an empirical bed load-transport function, a relation between transport and infiltration of sandy bedload into a gravel bed, effects of fine-...

  15. Simulating the effects of fluctuating dissolved oxygen on growth, reproduction, and survival of fish and shrimp. (United States)

    Miller Neilan, Rachael; Rose, Kenneth


    Individuals are commonly exposed to fluctuating levels of stressors, while most laboratory experiments focus on constant exposures. We develop and test a mathematical model for predicting the effects of low dissolved oxygen (hypoxia) on growth, reproduction, and survival using laboratory experiments on fish and shrimp. The exposure-effects model simulates the hourly reductions in growth and survival, and the reduction in reproduction (fecundity) at times of spawning, of an individual as it is exposed to constant or hourly fluctuating dissolved oxygen (DO) concentrations. The model was applied to seven experiments involving fish and shrimp that included constant and fluctuating DO exposures, with constant exposures used for parameter estimation and the model then used to simulate the growth, reproduction, and survival in the fluctuating treatments. Cumulative effects on growth, reproduction, and survival were predicted well by the model, but the model did not replay the observed episodic low survival days. Further investigation should involve the role of acclimation, possible inclusion of repair effects in reproduction and survival, and the sensitivity of model predictions to the shape of the immediate effects function. Additional testing of the model with other taxa, different patterns of fluctuating exposures, and different stressors is needed to determine the model's generality and robustness. © 2013 Elsevier Ltd. All rights reserved.

  16. Simulating the Emergence and Survival of Mutations Using a Self Regulating Multitype Branching Processes

    Directory of Open Access Journals (Sweden)

    Charles J. Mode


    Full Text Available It is difficult for an experimenter to study the emergence and survival of mutations, because mutations are rare events so that large experimental population must be maintained to ensure a reasonable chance that a mutation will be observed. In his famous book, The Genetical Theory of Natural Selection, Sir R. A. Fisher introduced branching processes into evolutionary genetics as a framework for studying the emergence and survival of mutations in an evolving population. During the lifespan of Fisher, computer technology had not advanced to a point at which it became an effective tool for simulating the phenomenon of the emergence and survival of mutations, but given the wide availability of personal desktop and laptop computers, it is now possible and financially feasible for investigators to perform Monte Carlo Simulation experiments. In this paper all computer simulation experiments were carried out within a framework of self regulating multitype branching processes, which are part of a stochastic working paradigm. Emergence and survival of mutations could also be studied within a deterministic paradigm, which raises the issue as to what sense are predictions based on the stochastic and deterministic models are consistent. To come to grips with this issue, a technique was used such that a deterministic model could be embedded in a branching process so that the predictions of both the stochastic and deterministic compared based on the same assigned values of parameters.

  17. Growth and Survival of Some Probiotic Strains in Simulated Ice Cream Conditions (United States)

    Homayouni, A.; Ehsani, M. R.; Azizi, A.; Razavi, S. H.; Yarmand, M. S.

    A Completely Randomized Design (CRD) experiment was applied in triplicates to evaluate the survival of four probiotic strains in simulated ice cream conditions. The growth and survival rate of these probiotic strains (Lactobacillus acidophilus, Lactobacillus casei, Bifidobacterium bifidum and Bifidobacterium longum) in varying amount of sucrose (10, 15, 20 and 25%), oxygen scavenging components (0.05% L-cysteine and 0.05% L-ascorbate) and temperatures (4 and -20°C) during different periods of time (1, 2 and 3 months) were evaluated in MRS-broth medium. Optical density at 580 nm was used to measure growth. Lactobacilli strains proved to be highly resistant in comparison with Biffidobacteria strains. The viable cell number of Lactobacillus casei in different sucrose concentrations, different oxidoreduction potentials and refrigeration temperature was 1x1010, 2x108 and 5x107 cfu mL-1, respectively. Growth and survival rate of Lactobacillus casei showed to be the highest.

  18. Effects of simulated Mars conditions on the survival and growth of Escherichia coli and Serratia liquefaciens. (United States)

    Berry, Bonnie J; Jenkins, David G; Schuerger, Andrew C


    Escherichia coli and Serratia liquefaciens, two bacterial spacecraft contaminants known to replicate under low atmospheric pressures of 2.5 kPa, were tested for growth and survival under simulated Mars conditions. Environmental stresses of high salinity, low temperature, and low pressure were screened alone and in combination for effects on bacterial survival and replication, and then cells were tested in Mars analog soils under simulated Mars conditions. Survival and replication of E. coli and S. liquefaciens cells in liquid medium were evaluated for 7 days under low temperatures (5, 10, 20, or 30 degrees C) with increasing concentrations (0, 5, 10, or 20%) of three salts (MgCl(2), MgSO(4), NaCl) reported to be present on the surface of Mars. Moderate to high growth rates were observed for E. coli and S. liquefaciens at 30 or 20 degrees C and in solutions with 0 or 5% salts. In contrast, cell densities of both species generally did not increase above initial inoculum levels under the highest salt concentrations (10 and 20%) and the four temperatures tested, with the exception that moderately higher cell densities were observed for both species at 10% MgSO(4) maintained at 20 or 30 degrees C. Growth rates of E. coli and S. liquefaciens in low salt concentrations were robust under all pressures (2.5, 10, or 101.3 kPa), exhibiting a general increase of up to 2.5 orders of magnitude above the initial inoculum levels of the assays. Vegetative E. coli cells were maintained in a Mars analog soil for 7 days under simulated Mars conditions that included temperatures between 20 and -50 degrees C for a day/night diurnal period, UVC irradiation (200 to 280 nm) at 3.6 W m(-2) for daytime operations (8 h), pressures held at a constant 0.71 kPa, and a gas composition that included the top five gases found in the martian atmosphere. Cell densities of E. coli failed to increase under simulated Mars conditions, and survival was reduced 1 to 2 orders of magnitude by the interactive

  19. Cognitive function, stress hormones, heart rate and nutritional status during simulated captivity in military survival training. (United States)

    Lieberman, Harris R; Farina, Emily K; Caldwell, John; Williams, Kelly W; Thompson, Lauren A; Niro, Philip J; Grohmann, Kyle A; McClung, James P


    Stress influences numerous psychological and physiological processes, and its effects have practical implications in a variety of professions and real-world activities. However, few studies have concurrently assessed multiple behavioral, hormonal, nutritional and heart-rate responses of humans to acute, severe stress. This investigation simultaneously assessed cognitive, affective, hormonal, and heart-rate responses induced by an intensely stressful real-world environment designed to simulate wartime captivity. Sixty males were evaluated during and immediately following participation in U.S. Army Survival, Evasion, Resistance, and Escape (SERE) school, three weeks of intense but standardized training for Soldiers at risk of capture. Simulated captivity and intense mock interrogations degraded grammatical reasoning (pworking memory (pnutritional status and heart rate are simultaneously altered, and each of these subsequently recovers at different rates. Published by Elsevier Inc.

  20. Survival of Deinococcus geothermalis in Biofilms under Desiccation and Simulated Space and Martian Conditions (United States)

    Frösler, Jan; Panitz, Corinna; Wingender, Jost; Flemming, Hans-Curt; Rettberg, Petra


    Biofilm formation represents a successful survival strategy for bacteria. In biofilms, cells are embedded in a matrix of extracellular polymeric substances (EPS). As they are often more stress-tolerant than single cells, biofilm cells might survive the conditions present in space and on Mars. To investigate this topic, the bacterium Deinococcus geothermalis was chosen as a model organism due to its tolerance toward desiccation and radiation. Biofilms cultivated on membranes and, for comparison, planktonically grown cells deposited on membranes were air-dried and exposed to individual stressors that included prolonged desiccation, extreme temperatures, vacuum, simulated martian atmosphere, and UV irradiation, and they were exposed to combinations of stressors that simulate space (desiccation + vacuum + UV) or martian (desiccation + Mars atmosphere + UV) conditions. The effect of sulfatic Mars regolith simulant on cell viability during stress was investigated separately. The EPS produced by the biofilm cells contained mainly polysaccharides and proteins. To detect viable but nonculturable (VBNC) cells, cultivation-independent viability indicators (membrane integrity, ATP, 16S rRNA) were determined in addition to colony counts. Desiccation for 2 months resulted in a decrease of culturability with minor changes of membrane integrity in biofilm cells and major loss of membrane integrity in planktonic bacteria. Temperatures between -25°C and +60°C, vacuum, and Mars atmosphere affected neither culturability nor membrane integrity in both phenotypes. Monochromatic (254 nm; ≥1 kJ m-2) and polychromatic (200-400 nm; >5.5 MJ m-2 for planktonic cells and >270 MJ m-2 for biofilms) UV irradiation significantly reduced the culturability of D. geothermalis but did not affect cultivation-independent viability markers, indicating the induction of a VBNC state in UV-irradiated cells. In conclusion, a substantial proportion of the D. geothermalis population remained viable under

  1. Supercritical carbon dioxide interpolymer complexes improve survival of B. longum Bb-46 in simulated gastrointestinal fluids. (United States)

    Thantsha, Mapitsi S; Cloete, Thomas E; Moolman, Francis S; Labuschagne, Philip W


    Gastric acidity is the main factor affecting viability of probiotics in the gastrointestinal tract (GIT). This study investigated the survival in simulated gastrointestinal fluids of Bifidobacterium longum Bb-46 encapsulated in interpolymer complexes formed in supercritical carbon dioxide (scCO(2)). Bacteria were exposed sequentially to simulated gastric fluid (SGF, pH 2) for 2 h and simulated intestinal fluid (SIF, pH 6.8) for 6 or 24 h. Total encapsulated bacteria were determined by suspending 1 g of product in SIF for 6 h at 37 degrees C prior to plating out. Plates were incubated anaerobically at 37 degrees C for 72 h. The interpolymer complex displayed pH-responsive release properties, with little to no release in SGF and substantial release in SIF. There was a limited reduction in viable counts at the end of exposure period due to encapsulation. Protection efficiency of the interpolymer complex was improved by addition of glyceryl monostearate (GMS). Gelatine capsules delayed release of bacteria from the interpolymer complex thus minimizing time of exposure to the detrimental conditions. Use of poly(caprolactone) (PCL), ethylene oxide-propylene oxide triblock copolymer (PEO-PPO-PEO) decreased the protection efficiency of the matrix. Interpolymer complex encapsulation showed potential for protection of probiotics and therefore for application in food and pharmaceuticals.

  2. Survival of Lactobacillus rhamnosus strains inoculated in cheese matrix during simulated human digestion. (United States)

    Pitino, Iole; Randazzo, Cinzia L; Cross, Kathryn L; Parker, Mary L; Bisignano, Carlo; Wickham, Martin S J; Mandalari, Giuseppina; Caggia, Cinzia


    Survival of probiotic bacteria during transit through the gastrointestinal (GI) tract is influenced by a number of environmental variables including stomach acidity, bile salts, digestive enzymes and food matrix. This study assessed survival of seven selected Lactobacillus rhamnosus strains delivered within a model cheese system to the human upper GI tract using a dynamic gastric model (DGM). Good survival rates for all tested strains were recorded during both simulated gastric and duodenal digestion. Strains H12, H25 and N24 demonstrated higher survival capacities during gastric digestion than L. rhamnosus GG strain used as control, with H12 and N24 continuing to grow during duodenal digestion. Strains L. rhamnosus F17, N24 and R61 showed adhesion properties to both HT-29 and Caco-2 cells. The ability to attach to the cheese matrix during digestion was confirmed by scanning electron microscopy, also indicating production of extracellular polysaccharides as a response to acid stress. Copyright © 2012 Elsevier Ltd. All rights reserved.

  3. Toward computer simulation of high-LET in vitro survival curves (United States)

    Heuskin, A.-C.; Michiels, C.; Lucas, S.


    We developed a Monte Carlo based computer program called MCSC (Monte Carlo Survival Curve) able to predict the survival fraction of cells irradiated in vitro with a broad beam of high linear energy transfer particles. Three types of cell responses are studied: the usual high dose response, the bystander effect and the low-dose hypersensitivity (HRS). The program models the broad beam irradiation and double strand break distribution following Poisson statistics. The progression of cells through the cell cycle is taken into account while the repair takes place. Input parameters are experimentally determined for A549 lung carcinoma cells irradiated with 10 and 20 keV µm-1 protons, 115 keV µm-1 alpha particles and for EAhy926 endothelial cells exposed to 115 keV µm-1 alpha particles. Results of simulations are presented and compared with experimental survival curves obtained for A549 and EAhy296 cells. Results are in good agreement with experimental data for both cell lines and all irradiation protocols. The benefits of MCSC are several: the gain of time that would have been spent performing time-consuming clonogenic assays, the capacity to estimate survival fraction of cell lines not forming colonies and possibly the evaluation of radiosensitivity parameters of given individuals.

  4. Effect of encapsulation of selected probiotic cell on survival in simulated gastrointestinal tract condition

    Directory of Open Access Journals (Sweden)

    Hasiah Ayama


    Full Text Available The health benefits of probiotic bacteria have been led to their increasing use in foods. Encapsulation has been investigated to improve their survival. In this study, the selection, encapsulation and viability of lactic acid bacteria (LAB with probiotic properties in simulated gastrointestinal tract (GIT condition were investigated. One hundred and fifty isolates of LAB were obtained from 30 samples of raw cow and goat milk and some fermented foods. Nine isolates could survive under GIT condition and only 3 isolates exhibited an antimicrobial activity against all food-borne pathogenic bacteria. Among them, 2 isolates (CM21 and CM53 exhibited bile salt hydrolase activity on glycocholate and glycodeoxycholate agar plates and were identified as Lactobacillus plantarum. CM53 was selected for encapsulation using 1-3% alginate and 2% Hi-maize resistant starch by emulsion system. Viability and releasing ability of encapsulated CM53 in simulated GIT condition was increased in accordance to the alginate concentration and incubation time, respectively.

  5. Survival and Adaptation of the Thermophilic Species Geobacillus thermantarcticus in Simulated Spatial Conditions (United States)

    Di Donato, Paola; Romano, Ida; Mastascusa, Vincenza; Poli, Annarita; Orlando, Pierangelo; Pugliese, Mariagabriella; Nicolaus, Barbara


    Astrobiology studies the origin and evolution of life on Earth and in the universe. According to the panspermia theory, life on Earth could have emerged from bacterial species transported by meteorites, that were able to adapt and proliferate on our planet. Therefore, the study of extremophiles, i.e. bacterial species able to live in extreme terrestrial environments, can be relevant to Astrobiology studies. In this work we described the ability of the thermophilic species Geobacillus thermantarcticus to survive after exposition to simulated spatial conditions including temperature's variation, desiccation, X-rays and UVC irradiation. The response to the exposition to the space conditions was assessed at a molecular level by studying the changes in the morphology, the lipid and protein patterns, the nucleic acids. G. thermantarcticus survived to the exposition to all the stressing conditions examined, since it was able to restart cellular growth in comparable levels to control experiments carried out in the optimal growth conditions. Survival was elicited by changing proteins and lipids distribution, and by protecting the DNA's integrity.

  6. The Survival and Resistance of Halobacterium salinarum NRC-1, Halococcus hamelinensis, and Halococcus morrhuae to Simulated Outer Space Solar Radiation. (United States)

    Leuko, S; Domingos, C; Parpart, A; Reitz, G; Rettberg, P


    Solar radiation is among the most prominent stress factors organisms face during space travel and possibly on other planets. Our analysis of three different halophilic archaea, namely Halobacterium salinarum NRC-1, Halococcus morrhuae, and Halococcus hamelinensis, which were exposed to simulated solar radiation in either dried or liquid state, showed tremendous differences in tolerance and survivability. We found that Hcc. hamelinensis is not able to withstand high fluences of simulated solar radiation compared to the other tested organisms. These results can be correlated to significant differences in genomic integrity following exposure, as visualized by random amplified polymorphic DNA (RAPD)-PCR. In contrast to the other two tested strains, Hcc. hamelinensis accumulates compatible solutes such as trehalose for osmoprotection. The addition of 100 mM trehalose to the growth medium of Hcc. hamelinensis improved its survivability following exposure. Exposure of cells in liquid at different temperatures suggests that Hbt. salinarum NRC-1 is actively repairing cellular and DNA damage during exposure, whereas Hcc. morrhuae exhibits no difference in survival. For Hcc. morrhuae, the high resistance against simulated solar radiation may be explained with the formation of cell clusters. Our experiments showed that these clusters shield cells on the inside against simulated solar radiation, which results in better survival rates at higher fluences when compared to Hbt. salinarum NRC-1 and Hcc. hamelinensis. Overall, this study shows that some halophilic archaea are highly resistant to simulated solar radiation and that they are of high astrobiological significance. Halophiles-Solar radiation-Stress resistance-Survival.

  7. Survival of Antarctic Cryptoendolithic Fungi in Simulated Martian Conditions On Board the International Space Station. (United States)

    Onofri, Silvano; de Vera, Jean-Pierre; Zucconi, Laura; Selbmann, Laura; Scalzi, Giuliano; Venkateswaran, Kasthuri J; Rabbow, Elke; de la Torre, Rosa; Horneck, Gerda


    Dehydrated Antarctic cryptoendolithic communities and colonies of the rock inhabitant black fungi Cryomyces antarcticus (CCFEE 515) and Cryomyces minteri (CCFEE 5187) were exposed as part of the Lichens and Fungi Experiment (LIFE) for 18 months in the European Space Agency's EXPOSE-E facility to simulated martian conditions aboard the International Space Station (ISS). Upon sample retrieval, survival was proved by testing colony-forming ability, and viability of cells (as integrity of cell membrane) was determined by the propidium monoazide (PMA) assay coupled with quantitative PCR tests. Although less than 10% of the samples exposed to simulated martian conditions were able to proliferate and form colonies, the PMA assay indicated that more than 60% of the cells and rock communities had remained intact after the "Mars exposure." Furthermore, a high stability of the DNA in the cells was demonstrated. The results contribute to assessing the stability of resistant microorganisms and biosignatures on the surface of Mars, data that are valuable information for further search-for-life experiments on Mars. Endoliths-Eukaryotes-Extremophilic microorganisms-Mars-Radiation resistance.

  8. Mechanisms of spinal motoneurons survival in rats under simulated hypogravity on earth (United States)

    Islamov, R. R.; Mishagina, E. A.; Tyapkina, O. V.; Shajmardanova, G. F.; Eremeev, A. A.; Kozlovskaya, I. B.; Nikolskij, E. E.; Grigorjev, A. I.


    It was previously shown that different cell types in vivo and in vitro may die via apoptosis under weightlessness conditions in space as well as in simulated hypogravity on the Earth. We assessed survivability of spinal motoneurons of rats after 35-day antiorthostatic hind limb suspension. Following weight bearing, unloading the total protein content in lumbar spinal cord is dropped by 21%. The electrophysiological studies of m. gastrocnemius revealed an elevated motoneurons' reflex excitability and conduction disturbances in the sciatic nerve axons. The number of myelinated fibers in the ventral root of experimental animals was insignificantly increased by 35-day of antiorthostatic hind limb suspension, although the retrograde axonal transport was significantly decreased during the first week of simulated hypogravity. The results of the immunohistochemical assay with antibodies against proapoptotic protein caspase 9 and cytotoxicity marker neuron specific nitric oxide synthase (nNOS) and the TUNEL staining did not reveal any signs of apoptosis in motoneurons of suspended and control animals. To examine the possible adaptation mechanisms activated in motoneurons in response to simulated hypogravity we investigated immunoexpression of Hsp25 and Hsp70 in lumbar spinal cord of the rats after 35-day antiorthostatic hind limb suspension. Comparative analysis of the immunohistochemical reaction with anti-Hsp25 antibodies revealed differential staining of motoneurons in intact and experimental animals. The density of immunoprecipitate with anti-Hsp25 antibodies was substantially higher in motoneurons of the 35-day suspended than control rats and the more intensive precipitate in this reaction was observed in motoneuron neuritis. Quantitative analysis of Hsp25 expression demonstrated an increase in the Hsp25 level by 95% in experimental rats compared to the control. The immunoexpression of Hsp70 found no qualitative and quantitative differences in control and experimental

  9. Designing a monitoring program to estimate estuarine survival of anadromous salmon smolts: simulating the effect of sample design on inference (United States)

    Romer, Jeremy D.; Gitelman, Alix I.; Clements, Shaun; Schreck, Carl B.


    A number of researchers have attempted to estimate salmonid smolt survival during outmigration through an estuary. However, it is currently unclear how the design of such studies influences the accuracy and precision of survival estimates. In this simulation study we consider four patterns of smolt survival probability in the estuary, and test the performance of several different sampling strategies for estimating estuarine survival assuming perfect detection. The four survival probability patterns each incorporate a systematic component (constant, linearly increasing, increasing and then decreasing, and two pulses) and a random component to reflect daily fluctuations in survival probability. Generally, spreading sampling effort (tagging) across the season resulted in more accurate estimates of survival. All sampling designs in this simulation tended to under-estimate the variation in the survival estimates because seasonal and daily variation in survival probability are not incorporated in the estimation procedure. This under-estimation results in poorer performance of estimates from larger samples. Thus, tagging more fish may not result in better estimates of survival if important components of variation are not accounted for. The results of our simulation incorporate survival probabilities and run distribution data from previous studies to help illustrate the tradeoffs among sampling strategies in terms of the number of tags needed and distribution of tagging effort. This information will assist researchers in developing improved monitoring programs and encourage discussion regarding issues that should be addressed prior to implementation of any telemetry-based monitoring plan. We believe implementation of an effective estuary survival monitoring program will strengthen the robustness of life cycle models used in recovery plans by providing missing data on where and how much mortality occurs in the riverine and estuarine portions of smolt migration. These data

  10. Lichens as a model-system for survival of eukaryotic symbiotic associations to simulated space conditions (United States)

    de Vera, J.-P.; Horneck, G.; Rettberg, P.; Ott, S.

    Lichens are symbiotic organisms associated by a fungus (mycobiont) and a a photosynthetic biont. As a consequence of the symbiotic state both the bionts are able to colonise habitats where the separate bionts would not be able to survive. The symbiosis of lichens reflects a high degree of complexity and plasticity. The combination of the different bionts enables these organisms to colonise most extreme habitats worldwide as polar regions, deserts and alpine zones. Besides the well investigated microorganisms lichens are good modelsystems to examine adaptation strategies to most extreme environmental conditions. They clearly demonstrate a high resistence to simulated space conditions concerning UV spectra (λ ≥ 160 nm) and vacuum (p = 10-5 Pa). Lichens are poikilohydric organisms. They are physiologically active if they are wet but if dry they are in the state of anabiosis. Lichens are highly resistant to simulated space conditions if they are in the dry state as has been examined in the lichen and the respective bionts of Xanthoria elegans. We performed experiments to test the resistence of wet lichens while they are physiologically active for comparison. Buellia frigida from sites on the Antarctic continent and Peltigera aphthosa colonising shady habitats in Norway have been used. The influence of different doses of UV-C on the viability of both lichen species has been studied. The analysis of the results has been done by Confocal Laser Scanning Microscopy (CLSM) using fluorescent LIVE/DEAD-substances. While B. frigida shows a very high resistence combined with a high viability to UV-C during the whole experiment the viability of the shady lichen P. aphthosadecreases immediately. The results clearly show a graded resistence in the lichen symbiosis depending on the adaptation mechanisms to the respective environmental conditions. These results will be discussed and compared with results achieved in former investigations with lichen species. The adaptation

  11. Helping mothers survive bleeding after birth: an educational of simulation-based training in a low resource setting

    NARCIS (Netherlands)

    Nelissen, E.J.T.; Ersdal, H.; Ostergaard, D.; Mduma, E.; Broerse, J.E.W.; Evjen-Olsen, B.; van Roosmalen, J.; Stekelenburg, J.


    Objective To evaluate "Helping Mothers Survive Bleeding After Birth" (HMS BAB) simulation-based training in a low-resource setting. Design Educational intervention study. Setting Rural referral hospital in Northern Tanzania. Population Clinicians, nurse-midwives, medical attendants, and ambulance

  12. Green tea increases the survival yield of Bifidobacteria in simulated gastrointestinal environment and during refrigerated conditions

    Directory of Open Access Journals (Sweden)

    Vodnar Dan C


    Full Text Available Abstract Background The well–known prebiotics are carbohydrates but their effects may not always be beneficial, as they can also encourage the growth of non-probiotic bacteria such as Eubacterium biforme and Clostridium perfringens. Therefore, new alternatives such as non-carbohydrate sources to stimulate the growth of probiotics are needed. The aim of this work was to evaluate (I the green tea polyphenols by HPLC-LC/MS and (II the protective effect of green tea extract on viability and stability of B. infantis ATCC 15697 and B. breve ATCC 15700 microencapsulated in chitosan coated alginate microcapsules during exposure to simulated gastrointestinal conditions and refrigerated storage. Results The major compound identified by HPLC-LC/MS in green tea was epigallocatechin gallate followed by caffeine and epigallocatechin. The survival yield of probiotic bacteria in microcapsules with 10% GT during storage at 4°C, demonstrated significantly (P B.infantis and B. breve with 5% and 10% GT showed a significantly (P  Conclusions The results of this study suggest that green tea coencapsulated with B. infantis or B. breve exert a protective effect of bacteria during exposure to gastrointestinal conditions and refrigerated storage. For a health perspective, the results confirm the growing interest probiotic bacteria and the perceived benefit of increasing their numbers in the gastrointestinal tract by microencapsulation.

  13. Survival of B. Horneckiae Spores Under Ground-simulated Space Conditions (United States)

    Schanche, Bradley


    To prevent forward contamination and maintain the scientific integrity of future life detection missions, it is important to characterize and attempt to eliminate terrestrial microorganisms associated with exploratory spacecraft and landing vehicles. Among the organisms isolated from spacecraft-associated habitats, spore-forming microbes are highly resistant to various physical and chemical conditions, which include ionizing and UV radiation, desiccation and oxidative stress, and the harsh environment of outer space or planetary surfaces. Recently a radiation resistant, spore forming bacterial isolate, Bacillus horneckiae, was isolated from a clean room of the Kennedy Space Center where the Phoenix spacecraft was assembled. The exceptionally high tolerance of extreme conditions demonstrated by sporeforming bacteria highlighted the need to assess the viability of these microbes in situ (in real) space. The proposed BOSS (Biofilm Organisms Surfing Space) project aims to understand the mechanisms by which biofilm forming organisms, such as B. horneckiae, will potentially be able to withstand harsh space conditions. As previously stated, the spore producing ability of these species gives them increased survivability to harsh conditions. Some of the spores will have the protective exosporium layer artificially removed before the test to determine if the existence of this layer significantly changes the survivability during the mission. In preparation for that experiment, we analyzed spores which were exposed during a ground simulation, the EXPOSE R2 Biofilm Organisms Surfing Space (BOSS). Previous to exposure, spores were deposited onto spacecraft grade aluminum coupons in a spore suspension calculated to contain between 10(exp 7) and 10(exp 8) spores. This precursor series will be used to establish a baseline survivability function for comparison with the future flight tests during EXPOSE-R. For each coupon, a 10% polyvinyl alcohol (PVA) film was applied and peeled

  14. Survival of Salmonella enterica serotype Tennessee during simulated gastric passage is improved by low water activity and high fat content. (United States)

    Aviles, Bryan; Klotz, Courtney; Smith, Twyla; Williams, Robert; Ponder, Monica


    The low water activity (a(w) 0.3) of peanut butter prohibits the growth of Salmonella in a product; however, illnesses are reported from peanut butter contaminated with very small doses, suggesting the food matrix itself influences the infectious dose of Salmonella, potentially by improving Salmonella's survival in the gastrointestinal tract. The purpose of our study was to quantify the survival of a peanut butter outbreak-associated strain of Salmonella enterica serotype Tennessee when inoculated into peanut butters with different fat contents and a(w) (high fat, high a(w); high fat, low a(w); low fat, high a(w); low fat, low a(w)) and then challenged with a simulated gastrointestinal system. Exposures to increased fat content and decreased a(w) both were associated with a protective effect on the survival of Salmonella Tennessee in the simulated gastric fluid compared with control cells. After a simulated intestinal phase, the populations of Salmonella Tennessee in the control and low-fat formulations were not significantly different; however, a 2-log CFU/g increase occurred in high-fat formulations. This study demonstrates that cross-protection from low-a(w) stress and the presence of high fat results in improved survival in the low pH of the stomach. The potential for interaction of food matrix and stress adaptations could influence the virulence of Salmonella and should be considered for risk analysis.

  15. Simulation reframed. (United States)

    Kneebone, Roger L


    Simulation is firmly established as a mainstay of clinical education, and extensive research has demonstrated its value. Current practice uses inanimate simulators (with a range of complexity, sophistication and cost) to address the patient 'as body' and trained actors or lay people (Simulated Patients) to address the patient 'as person'. These approaches are often separate.Healthcare simulation to date has been largely for the training and assessment of clinical 'insiders', simulating current practices. A close coupling with the clinical world restricts access to the facilities and practices of simulation, often excluding patients, families and publics. Yet such perspectives are an essential component of clinical practice. This paper argues that simulation offers opportunities to move outside a clinical 'insider' frame and create connections with other individuals and groups. Simulation becomes a bridge between experts whose worlds do not usually intersect, inviting an exchange of insights around embodied practices-the 'doing' of medicine-without jeopardising the safety of actual patients.Healthcare practice and education take place within a clinical frame that often conceals parallels with other domains of expert practice. Valuable insights emerge by viewing clinical practice not only as the application of medical science but also as performance and craftsmanship.Such connections require a redefinition of simulation. Its essence is not expensive elaborate facilities. Developments such as hybrid, distributed and sequential simulation offer examples of how simulation can combine 'patient as body' with 'patient as person' at relatively low cost, democratising simulation and exerting traction beyond the clinical sphere.The essence of simulation is a purposeful design, based on an active process of selection from an originary world, abstraction of what is criterial and re - presentation in another setting for a particular purpose or audience. This may be done within

  16. Survival of Bifidobacterium longum LMG 13197 microencapsulated in Vegetal or Vegetal-inulin matrix in simulated gastrointestinal fluids and yoghurt


    Amakiri, Andreal Chioma; Thantsha, Mapitsi Silvester


    Background Vegetal BM 297 ATO is a food grade lipid based material extracted from vegetables, and certified for human consumption. In this study, Bifidobacterium longum LMG 13197 was encapsulated in Vegetal BM 297 ATO-inulin by freeze drying, followed by evaluation of its survival in simulated gastrointestinal fluids and yoghurt. Furthermore, the effect of incorporation of such microparticles on physico-chemical properties of yoghurt was examined. Unencapsulated and encapsulated B. longum cel...

  17. Additive survival least square support vector machines: A simulation study and its application to cervical cancer prediction (United States)

    Khotimah, Chusnul; Purnami, Santi Wulan; Prastyo, Dedy Dwi; Chosuvivatwong, Virasakdi; Sriplung, Hutcha


    Support Vector Machines (SVMs) has been widely applied for prediction in many fields. Recently, SVM is also developed for survival analysis. In this study, Additive Survival Least Square SVM (A-SURLSSVM) approach is used to analyze cervical cancer dataset and its performance is compared with the Cox model as a benchmark. The comparison is evaluated based on the prognostic index produced: concordance index (c-index), log rank, and hazard ratio. The higher prognostic index represents the better performance of the corresponding methods. This work also applied feature selection to choose important features using backward elimination technique based on the c-index criterion. The cervical cancer dataset consists of 172 patients. The empirical results show that nine out of the twelve features: age at marriage, age of first getting menstruation, age, parity, type of treatment, history of family planning, stadium, long-time of menstruation, and anemia status are selected as relevant features that affect the survival time of cervical cancer patients. In addition, the performance of the proposed method is evaluated through a simulation study with the different number of features and censoring percentages. Two out of three performance measures (c-index and hazard ratio) obtained from A-SURLSSVM consistently yield better results than the ones obtained from Cox model when it is applied on both simulated and cervical cancer data. Moreover, the simulation study showed that A-SURLSSVM performs better when the percentage of censoring data is small.

  18. SJFHQ Simulation


    Schacher, Gordon; Dailey, James; Looney, John; Saylor, Steven; Jenson, Jack; Hutchins, Susan; Gallup, Shelley


    A four level architecture has been developed for SJFHQ processes. This architecture has been used to develop a simulation of SJFHQ operations. Correct simulation performance has been verified and initial results produced. The results focus on personal work tasking and multi-tasking effects.

  19. Excel simulations

    CERN Document Server

    Verschuuren, Gerard M


    Covering a variety of Excel simulations, from gambling to genetics, this introduction is for people interested in modeling future events, without the cost of an expensive textbook. The simulations covered offer a fun alternative to the usual Excel topics and include situations such as roulette, password cracking, sex determination, population growth, and traffic patterns, among many others.

  20. Survival of akinetes (resting-state cells of cyanobacteria) in low earth orbit and simulated extraterrestrial conditions. (United States)

    Olsson-Francis, Karen; de la Torre, Rosa; Towner, Martin C; Cockell, Charles S


    Cyanobacteria are photosynthetic organisms that have been considered for space applications, such as oxygen production in bioregenerative life support systems, and can be used as a model organism for understanding microbial survival in space. Akinetes are resting-state cells of cyanobacteria that are produced by certain genera of heterocystous cyanobacteria to survive extreme environmental conditions. Although they are similar in nature to endospores, there have been no investigations into the survival of akinetes in extraterrestrial environments. The aim of this work was to examine the survival of akinetes from Anabaena cylindrica in simulated extraterrestrial conditions and in Low Earth Orbit (LEO). Akinetes were dried onto limestone rocks and sent into LEO for 10 days on the ESA Biopan VI. In ground-based experiments, the rocks were exposed to periods of desiccation, vacuum (0.7×10(-3) kPa), temperature extremes (-80 to 80°C), Mars conditions (-27°C, 0.8 kPa, CO(2)) and UV radiation (325-400 nm). A proportion of the akinete population was able to survive a period of 10 days in LEO and 28 days in Mars simulated conditions, when the rocks were not subjected to UV radiation. Furthermore, the akinetes were able to survive 28 days of exposure to desiccation and low temperature with high viability remaining. Yet long periods of vacuum and high temperature were lethal to the akinetes. This work shows that akinetes are extreme-tolerating states of cyanobacteria that have a practical use in space applications and yield new insight into the survival of microbial resting-state cells in space conditions.

  1. Simulation tools

    CERN Document Server

    Jenni, F


    In the last two decades, simulation tools made a significant contribution to the great progress in development of power electronics. Time to market was shortened and development costs were reduced drastically. Falling costs, as well as improved speed and precision, opened new fields of application. Today, continuous and switched circuits can be mixed. A comfortable number of powerful simulation tools is available. The users have to choose the best suitable for their application. Here a simple rule applies: The best available simulation tool is the tool the user is already used to (provided, it can solve the task). Abilities, speed, user friendliness and other features are continuously being improved—even though they are already powerful and comfortable. This paper aims at giving the reader an insight into the simulation of power electronics. Starting with a short description of the fundamentals of a simulation tool as well as properties of tools, several tools are presented. Starting with simplified models ...

  2. Microencapsulation of a probiotic and prebiotic in alginate-chitosan capsules improves survival in simulated gastro-intestinal conditions. (United States)

    Chávarri, María; Marañón, Izaskun; Ares, Raquel; Ibáñez, Francisco C; Marzo, Florencio; Villarán, María del Carmen


    Chitosan was used as a coating material to improve encapsulation of a probiotic and prebiotic in calcium alginate beads. Chitosan-coated alginate microspheres were produced to encapsulate Lactobacillus gasseri (L) and Bifidobacterium bifidum (B) as probiotics and the prebiotic quercetin (Q) with the objective of enhancing survival of the probiotic bacteria and keeping intact the prebiotic during exposure to the adverse conditions of the gastro-intestinal tract. The encapsulation yield for viable cells for chitosan-coated alginate microspheres with quercetin (L+Q and B+Q) was very low. These results, together with the study about the survival of microspheres with quercetin during storage at 4 degrees C, demonstrated that probiotic bacteria microencapsulated with quercetin did not survive. Owing to this, quercetin and L. gasseri or B. bifidum were microencapsulated separately. Microencapsulated L. gasseri and microencapsulated B. bifidum were resistant to simulated gastric conditions (pH 2.0, 2h) and bile solution (3%, 2h), resulting in significantly (pmicroencapsulation of L. gasseri and B. bifidum with alginate and a chitosan coating offers an effective means of delivery of viable bacterial cells to the colon and maintaining their survival during simulated gastric and intestinal juice. Copyright 2010 Elsevier B.V. All rights reserved.

  3. Growth and survival of blowfly Lucilia sericata larvae under simulated wound conditions: implications for maggot debridement therapy. (United States)

    Čičková, H; Kozánek, M; Takáč, P


    Maggot debridement therapy has become a well-established method of wound debridement. Despite its success, little information is available about the optimum duration of the treatment cycle and larval growth in wounds. This study examines the development of Lucilia sericata (Diptera: Calliphoridae) larvae under two containment conditions (bagged and free range) under simulated wound conditions and assesses the impact of transport and further storage of larvae on their survival and growth. There was no significant difference in size between bagged and free-range larvae over the 72-h experimental period. Larvae grew fastest 8-24 h after inoculation and completed their growth at 40-48 h. Mortality rates were similar (0.12-0.23% per hour) in both containment conditions and did not differ significantly (P = 0.3212). Survival of free-range larvae was on average 16% lower than survival of bagged larvae. Refrigeration of larvae upon simulated delivery for > 1 day reduced their survival to < 50% and caused a reduction in growth of up to 30% at 12 h, but not at 48 h, of incubation. Therefore, it is recommended that free-range larvae are left in the wound for a maximum of 40-48 h, and bagged larvae for 48-72 h. Larvae should be used within 24 h of delivery to avoid high mortality caused by prolonged refrigeration. © 2015 The Royal Entomological Society.

  4. Using simulation to interpret a discrete time survival model in a complex biological system: fertility and lameness in dairy cows.

    Directory of Open Access Journals (Sweden)

    Christopher D Hudson

    Full Text Available The ever-growing volume of data routinely collected and stored in everyday life presents researchers with a number of opportunities to gain insight and make predictions. This study aimed to demonstrate the usefulness in a specific clinical context of a simulation-based technique called probabilistic sensitivity analysis (PSA in interpreting the results of a discrete time survival model based on a large dataset of routinely collected dairy herd management data. Data from 12,515 dairy cows (from 39 herds were used to construct a multilevel discrete time survival model in which the outcome was the probability of a cow becoming pregnant during a given two day period of risk, and presence or absence of a recorded lameness event during various time frames relative to the risk period amongst the potential explanatory variables. A separate simulation model was then constructed to evaluate the wider clinical implications of the model results (i.e. the potential for a herd's incidence rate of lameness to influence its overall reproductive performance using PSA. Although the discrete time survival analysis revealed some relatively large associations between lameness events and risk of pregnancy (for example, occurrence of a lameness case within 14 days of a risk period was associated with a 25% reduction in the risk of the cow becoming pregnant during that risk period, PSA revealed that, when viewed in the context of a realistic clinical situation, a herd's lameness incidence rate is highly unlikely to influence its overall reproductive performance to a meaningful extent in the vast majority of situations. Construction of a simulation model within a PSA framework proved to be a very useful additional step to aid contextualisation of the results from a discrete time survival model, especially where the research is designed to guide on-farm management decisions at population (i.e. herd rather than individual level.

  5. Effect of Shadowing on Survival of Bacteria under Conditions Simulating the Martian Atmosphere and UV Radiation▿ † (United States)

    Osman, Shariff; Peeters, Zan; La Duc, Myron T.; Mancinelli, Rocco; Ehrenfreund, Pascale; Venkateswaran, Kasthuri


    Spacecraft-associated spores and four non-spore-forming bacterial isolates were prepared in Atacama Desert soil suspensions and tested both in solution and in a desiccated state to elucidate the shadowing effect of soil particulates on bacterial survival under simulated Martian atmospheric and UV irradiation conditions. All non-spore-forming cells that were prepared in nutrient-depleted, 0.2-μm-filtered desert soil (DSE) microcosms and desiccated for 75 days on aluminum died, whereas cells prepared similarly in 60-μm-filtered desert soil (DS) microcosms survived such conditions. Among the bacterial cells tested, Microbacterium schleiferi and Arthrobacter sp. exhibited elevated resistance to 254-nm UV irradiation (low-pressure Hg lamp), and their survival indices were comparable to those of DS- and DSE-associated Bacillus pumilus spores. Desiccated DSE-associated spores survived exposure to full Martian UV irradiation (200 to 400 nm) for 5 min and were only slightly affected by Martian atmospheric conditions in the absence of UV irradiation. Although prolonged UV irradiation (5 min to 12 h) killed substantial portions of the spores in DSE microcosms (∼5- to 6-log reduction with Martian UV irradiation), dramatic survival of spores was apparent in DS-spore microcosms. The survival of soil-associated wild-type spores under Martian conditions could have repercussions for forward contamination of extraterrestrial environments, especially Mars. PMID:18083857

  6. Simulation and Validation of Cisco Lethal Conditions in Minnesota Lakes under Past and Future Climate Scenarios Using Constant Survival Limits

    Directory of Open Access Journals (Sweden)

    Liping Jiang


    Full Text Available Fish habitat in lakes is strongly constrained by water temperature (T and available dissolved oxygen (DO that are changed under climate warming. A one dimensional, dynamic water quality model MINLAKE2012 was used for T and DO simulation over 48 years. A fish habitat model FishHabitat2013 using simulated T and DO profiles as input was developed to determine lethal conditions of cisco Corgenous artedi in Minnesota lakes. Twenty-three lakes that had observations of cisco mortality or survival in the unusually warm summer of 2006 were used for model validation. The cisco habitat model used a lethal temperature of 22.1 °C and DO survival limit of 3 mg/L determined through model validation and sensitivity analysis. Cisco lethal conditions in 12 shallow, 16 medium-depth, and 30 deep virtual lakes were then simulated. Isopleths of total number of years with cisco kill and average cisco kill days for the years with kills under past (1961–2008 and future climate were generated to understand/extrapolate climate impacts on cisco in 620 Minnesota lakes. Shallow and medium-depth lakes are projected to not be good candidates for cisco refuge lakes, but deep lakes are possible cisco refuge lakes based on lethal condition projection under future warmer climate.

  7. Simulation Exercises (United States)

    Tansey, Pat


    Describes five simulation exercises: a problem for a student teacher, an industrial relations game, a series of student problems; an international relations crisis, and a sociological exercise on public and private opinions. (LS)

  8. Nutrition and Hydration Status of Aircrew Members Consuming The Food Packet, Survival, General Purpose, Improved During A Simulated Survival Scenario (United States)


    over hilly terrain without packs to identify edible plants, shelter sites, water sources, and other materials to be used for survival purposes. The...snake, squirrel, trout, frog , venison, snail and numerous plant foods. In order to give the survival school students the same amount of kilocalories...dishes, Chinese or other ethnic foods, other fruits or vegetables, as well as nutritional supplements (bran, etc.). Please take a look at the list of

  9. Survival of Listeria monocytogenes in simulated gastrointestinal system and transcriptional profiling of stress- and adhesion-related genes. (United States)

    Jiang, Lingli; Olesen, Inger; Andersen, Thomas; Fang, Weihuan; Jespersen, Lene


    Food ingestion is the major route of exposure to the important human pathogen Listeria monocytogenes. An in vitro gastrointestinal model was used to (1) compare the survival rates of L. monocytogenes strains of serotypes 1/2a, 1/2c, and 4b; and (2) examine the transcription of stress- and adhesion-related genes after exposure to the conditions similar to those encountered in the mouth, stomach, and small intestine. None of the L. monocytogenes strains investigated could survive in the gastric juice at pH 2.5 or 3.0. Their survival increased at higher pH (3.5 and 4.0) in the gastric stress. Relative survival of L. monocytogenes serotypes 4b and 1/2a strains were higher than that of serotype 1/2c, suggesting that pathogenicity might be related to the viability in the gastrointestinal tract. The transcription levels of prfA and the general stress-related genes clpC, clpE, and clpP were upregulated after passing through the simulated gastrointestinal tract, whereas that of the adhesion-related gene ami was downregulated. Taken together, this study revealed that L. monocytogenes strains enhanced the expression of stress-related genes and decreased the transcription of adhesion-related gene in order to survive in the diverse microenvironments.

  10. Effect of Microencapsulation on Survival and Stability of Bifidobacterium bifidum BB01 Exposed to Simulated Gastrointestinal Conditions and in Different Food Matrices


    Chen He; Ma Donglin; Li Yichao; Liu Yu; Wang Ye


    Bifidobacterium bifidum BB01 was microencapsulated by extrusion method with sodium alginate. This paper aimed to study the survival rate of microencapsulating Bifidobacterium bifidum BB01 in simulated gastrointestinal conditions, resistance to artificial bile salt and stability during storage. Results showed non-microencapsulated Bifidobacterium bifidum BB01 were more susceptible than microencapsulated under simulated gastrointestinal conditions, and microencapsulated Bifidobacterium bifidum ...

  11. Signaling pathway models as biomarkers: Patient-specific simulations of JNK activity predict the survival of neuroblastoma patients. (United States)

    Fey, Dirk; Halasz, Melinda; Dreidax, Daniel; Kennedy, Sean P; Hastings, Jordan F; Rauch, Nora; Munoz, Amaya Garcia; Pilkington, Ruth; Fischer, Matthias; Westermann, Frank; Kolch, Walter; Kholodenko, Boris N; Croucher, David R


    Signaling pathways control cell fate decisions that ultimately determine the behavior of cancer cells. Therefore, the dynamics of pathway activity may contain prognostically relevant information different from that contained in the static nature of other types of biomarkers. To investigate this hypothesis, we characterized the network that regulated stress signaling by the c-Jun N-terminal kinase (JNK) pathway in neuroblastoma cells. We generated an experimentally calibrated and validated computational model of this network and used the model to extract prognostic information from neuroblastoma patient-specific simulations of JNK activation. Switch-like JNK activation mediates cell death by apoptosis. An inability to initiate switch-like JNK activation in the simulations was significantly associated with poor overall survival for patients with neuroblastoma with or without MYCN amplification, indicating that patient-specific simulations of JNK activation could stratify patients. Furthermore, our analysis demonstrated that extracting information about a signaling pathway to develop a prognostically useful model requires understanding of not only components and disease-associated changes in the abundance or activity of the components but also how those changes affect pathway dynamics. Copyright © 2015, American Association for the Advancement of Science.

  12. Survival of Bifidobacterium longum LMG 13197 microencapsulated in Vegetal or Vegetal-inulin matrix in simulated gastrointestinal fluids and yoghurt. (United States)

    Amakiri, Andreal Chioma; Thantsha, Mapitsi Silvester


    Vegetal BM 297 ATO is a food grade lipid based material extracted from vegetables, and certified for human consumption. In this study, Bifidobacterium longum LMG 13197 was encapsulated in Vegetal BM 297 ATO-inulin by freeze drying, followed by evaluation of its survival in simulated gastrointestinal fluids and yoghurt. Furthermore, the effect of incorporation of such microparticles on physico-chemical properties of yoghurt was examined. Unencapsulated and encapsulated B. longum cells were exposed to simulated gastrointestinal fluids for 6 h and yoghurt at 4 °C for 6 weeks, and then evaluated for viability using plate counts. By the end of exposure to simulated gastrointestinal fluids, encapsulated cells were >5 log units higher than their unencapsulated counterparts. Furthermore, their levels in yoghurt remained above 10(6) cfu mL(-1) until the end of 6 weeks of storage while unencapsulated levels were at this level up to 5 weeks. There were no significant differences in pH values of yoghurts containing encapsulated cells throughout the storage (p > 0.05). However, significant differences in the lightness and yellowness of these yoghurts were recorded, although the total colour change was negligible. Vegetal-inulin encapsulation protected probiotics in gastrointestinal fluids and yoghurt with negligible effects to its appearance, thus can be used for fortification of yoghurt with probiotics.

  13. Solar simulator

    NARCIS (Netherlands)

    Roest, S.J.M.


    Solar simulator comprising at least at least one high-intensity discharge (HID) lamp type,and at least one halogen lamp type, which lamps are applied simultaneously and are provided with infrared filter means to provide a mixture of light approximating radiated sunlight,wherein the infrared filter

  14. Simulating Gravity (United States)

    Pipinos, Savas


    This article describes one classroom activity in which the author simulates the Newtonian gravity, and employs the Euclidean Geometry with the use of new technologies (NT). The prerequisites for this activity were some knowledge of the formulae for a particle free fall in Physics and most certainly, a good understanding of the notion of similarity…

  15. The performance of different propensity score methods for estimating absolute effects of treatments on survival outcomes: A simulation study. (United States)

    Austin, Peter C; Schuster, Tibor


    Observational studies are increasingly being used to estimate the effect of treatments, interventions and exposures on outcomes that can occur over time. Historically, the hazard ratio, which is a relative measure of effect, has been reported. However, medical decision making is best informed when both relative and absolute measures of effect are reported. When outcomes are time-to-event in nature, the effect of treatment can also be quantified as the change in mean or median survival time due to treatment and the absolute reduction in the probability of the occurrence of an event within a specified duration of follow-up. We describe how three different propensity score methods, propensity score matching, stratification on the propensity score and inverse probability of treatment weighting using the propensity score, can be used to estimate absolute measures of treatment effect on survival outcomes. These methods are all based on estimating marginal survival functions under treatment and lack of treatment. We then conducted an extensive series of Monte Carlo simulations to compare the relative performance of these methods for estimating the absolute effects of treatment on survival outcomes. We found that stratification on the propensity score resulted in the greatest bias. Caliper matching on the propensity score and a method based on earlier work by Cole and Hernán tended to have the best performance for estimating absolute effects of treatment on survival outcomes. When the prevalence of treatment was less extreme, then inverse probability of treatment weighting-based methods tended to perform better than matching-based methods. © The Author(s) 2014.

  16. Helping mothers survive bleeding after birth: an evaluation of simulation-based training in a low-resource setting. (United States)

    Nelissen, Ellen; Ersdal, Hege; Ostergaard, Doris; Mduma, Estomih; Broerse, Jacqueline; Evjen-Olsen, Bjørg; van Roosmalen, Jos; Stekelenburg, Jelle


    To evaluate "Helping Mothers Survive Bleeding After Birth" (HMS BAB) simulation-based training in a low-resource setting. Educational intervention study. Rural referral hospital in Northern Tanzania. Clinicians, nurse-midwives, medical attendants, and ambulance drivers involved in maternity care. In March 2012, health care workers were trained in HMS BAB, a half-day simulation-based training, using a train-the-trainer model. The training focused on basic delivery care, active management of third stage of labor, and treatment of postpartum hemorrhage, including bimanual uterine compression. Evaluation questionnaires provided information on course perception. Knowledge, skills, and confidence of facilitators and learners were tested before and after training. Four master trainers trained eight local facilitators, who subsequently trained 89 learners. After training, all facilitators passed the knowledge test, but pass rates for the skills test were low (29% pass rate for basic delivery and 0% pass rate for management of postpartum hemorrhage). Evaluation revealed that HMS BAB training was considered acceptable and feasible, although more time should be allocated for training, and teaching materials should be translated into the local language. Knowledge, skills, and confidence of learners increased significantly immediately after training. However, overall pass rates for skills tests of learners after training were low (3% pass rate for basic delivery and management of postpartum hemorrhage). The HMS BAB simulation-based training has potential to contribute to education of health care providers. We recommend a full day of training and validation of the facilitators to improve the training. © 2013 Nordic Federation of Societies of Obstetrics and Gynecology.

  17. Family Growth and Survival Response to Two Simulated Water Temperature Environments in the Sea Urchin Strongylocentrotus intermedius

    Directory of Open Access Journals (Sweden)

    Yaqing Chang


    Full Text Available Heat tolerance is a target trait in the selective breeding of the sea urchin Strongylocentrotus intermedius, as it plays an important role in the survival and growth of cultured S. intermedius during summer. We investigated family growth and survival response to two temperature treatments to evaluate the genotype by temperature interaction (GEI in the family selection of S. intermedius. Sea urchins from 11 families were exposed to two simulated water temperature environments—high temperature (HE and control temperature (CE—for 12 months, with each experiment divided into four periods (P1, stress-free period I; P2, stress-full high period; P3, stress-response period; and P4, stress-free period II based on the temperature changes and the survival. Test diameter (TD, body weight (BW, and survival rate (SR in HE and CE were measured monthly. Effects of family, temperature, and family-temperature interaction on TD, BW, SR, and specific growth rate (SGR for BW were examined. In CE, BW differed significantly between families in P2, P3, and P4, while TD differed significantly between families in P3 and P4 (p < 0.05. In HE, family had significant effects on BW in P4, and on TD in P3 and P4, while temperature had significant effects on SR, TD, and BW in P3 and P4 (p < 0.05. GEI effects were not significant for TD or BW; however, family ranking changes revealed the existence of GEI in SR. The GEI results indicate the necessity of applying family selection in CE and HE for SR, but not for TD or BW. These results may provide a guide for aquaculture and selective breeding of S. intermedius under temperature pressure.

  18. Bacillus subtilis spore survival and expression of germination-induced bioluminescence after prolonged incubation under simulated Mars atmospheric pressure and composition: implications for planetary protection and lithopanspermia (United States)

    Nicholson, Wayne L.; Schuerger, Andrew C.


    Bacterial endospores in the genus Bacillus are considered good models for studying interplanetary transfer of microbes by natural or human processes. Although spore survival during transfer itself has been the subject of considerable study, the fate of spores in extraterrestrial environments has received less attention. In this report we subjected spores of a strain of Bacillus subtilis, containing luciferase resulting from expression of an sspB-luxAB gene fusion, to simulated martian atmospheric pressure (7-18 mbar) and composition (100% CO(2)) for up to 19 days in a Mars simulation chamber. We report here that survival was similar between spores exposed to Earth conditions and spores exposed up to 19 days to simulated martian conditions. However, germination-induced bioluminescence was lower in spores exposed to simulated martian atmosphere, which suggests sublethal impairment of some endogenous spore germination processes.

  19. [Simulation experiment of survival and reproduction of artificially imported Oncomelania snails in Qingpu District, Shanghai]. (United States)

    Tian, Jian-Guo; Li, Gui-Fu; Li, Jun; Zhang, Xiao-Ping; Jin, Yan-Jun; Cai, Li; Peng, Li-Xia; Xu, Hai-Yan; Xu, Rui-Fang


    To understand the survival of imported Oncomelania snails in new environments with different densities in waterway net region, Qingpu District, Shanghai. The snails collected from Guichi, Anhui Province were put into the ponds of 4 square meters and each had 25, 50, 100, 200, 400 and 800 pairs of snails, respectively. During the next 2 years, the temperature, humidity, the activities of snails and their second birth snails were investigated each day. All the data were analyzed statistically. The highest number of snails appeared from May to June on the surface of soils in different densities. The average numbers of snails were 2.0%-12.7% of whole put in snails, and the numbers of offspring were less than 2% of the whole put in snails. The survival and reproduction of artificially imported Oncomelania snails from Guichi, Anhui Province is not good in Qingpu District, Shanghai.

  20. Survival and electrotransformation of Pseudomonas syringae strains under simulated cloud-like conditions. (United States)

    Blanchard, Laurine S; Monin, Anaïs; Ouertani, Hounaïda; Touaibia, Lamia; Michel, Elisa; Buret, François; Simonet, Pascal; Morris, Cindy E; Demanèche, Sandrine


    To diversify their genetic material, and thereby allow adaptation to environmental disturbances and colonization of new ecological niches, bacteria use various evolutionary processes, including the acquisition of new genetic material by horizontal transfer mechanisms such as conjugation, transduction and transformation. Electrotransformation mediated by lightning-related electrical phenomena may constitute an additional gene-transfer mechanism occurring in nature. The presence in clouds of bacteria such as Pseudomonas syringae capable of forming ice nuclei that lead to precipitation, and that are likely to be involved in triggering lightning, led us to postulate that natural electrotransformation in clouds may contribute to the adaptive potential of these bacteria. Here, we quantify the survival rate of 10 P. syringae strains in liquid and icy media under such electrical pulses and their capacity to acquire exogenous DNA. In comparison to two other bacteria (Pseudomonas sp. N3 and Escherichia coli TOP10), P. syringae CC0094 appears to be best adapted for survival and for genetic electrotransformation under these conditions, which suggests that this bacterium would be able to survive and to get a boost in its adaptive potential while being transported in clouds and falling back to Earth with precipitation from storms. © FEMS 2017. All rights reserved. For permissions, please e-mail:

  1. Survival of pathogenic and lactobacilli species of fermented olives during simulated human digestion. (United States)

    Arroyo-López, Francisco N; Blanquet-Diot, Stéphanie; Denis, Sylvain; Thévenot, Jonathan; Chalancon, Sandrine; Alric, Monique; Rodríguez-Gómez, Francisco; Romero-Gil, Verónica; Jiménez-Díaz, Rufino; Garrido-Fernández, Antonio


    The present survey uses a dynamic gastric and small intestinal model to assess the survival of one pathogenic (Escherichia coli O157:H7 EDL 933) and three lactobacilli bacteria with probiotic potential (Lactobacillus rhamnosus GG, L. pentosus TOMC-LAB2, and L. pentosus TOMC-LAB4) during their passage through the human gastrointestinal tract using fermented olives as the food matrix. The data showed that the survival of the E. coli strain in the stomach and duodenum was very low, while its transit through the distal parts (jejunum and ileum) resulted in an increase in the pathogen population. The production of Shiga toxins by this enterohemorrhagic microorganism in the ileal effluents of the in vitro system was too low to be detected by ELISA assays. On the contrary, the three lactobacilli species assayed showed a considerable resistance to the gastric digestion, but not to the intestinal one, which affected their survival, and was especially evident in the case of both L. pentosus strains. In spite of this, high population levels for all assayed microorganisms were recovered at the end of the gastrointestinal passage. The results obtained in the present study show the potential use of table olives as a vehicle of beneficial microorganisms to the human body, as well as the need for good hygienic practices on the part of olive manufacturers in order to avoid the possibility of contamination by food-borne pathogens.

  2. Survival of pathogenic and lactobacilli species of fermented olives during simulated human digestion

    Directory of Open Access Journals (Sweden)

    Francisco Noé eArroyo López


    Full Text Available The present survey uses a dynamic gastric and small intestinal model to assess the survival of one pathogenic (Escherichia coli O157:H7 EDL 933 and three lactobacilli bacteria with probiotic potential (Lactobacillus rhamnosus GG, Lactobacillus pentosus TOMC-LAB2 and Lactobacillus pentosus TOMC-LAB4 during their passage through the human gastrointestinal tract using fermented olives as the food matrix. The data showed that the survival of the E. coli strain in the stomach and duodenum was very low, while its transit through the distal parts (jejunum and ileum resulted in an increase in the pathogen population. The production of Shiga toxins by this enterohemorrhagic microorganism in the ileal effluents of the in vitro system was too low to be detected by ELISA assays. On the contrary, the three lactobacilli species assayed showed a considerable resistance to the gastric digestion, but not to the intestinal one, which affected their survival, and was especially evident in the case of both L. pentosus strains. In spite of this, high population levels for all assayed microorganisms were recovered at the end of the gastrointestinal passage. The results obtained in the present study show the potential use of table olives as a vehicle of beneficial microorganisms to the human body, as well as the need for good hygienic practices on the part of olive manufacturers in order to avoid the possibility of contamination by food-borne pathogens.

  3. Synbiotic Amazonian palm berry (açai, Euterpe oleracea Mart.) ice cream improved Lactobacillus rhamnosus GG survival to simulated gastrointestinal stress. (United States)

    Costa, Mayra Garcia Maia; Ooki, Gabriela Namur; Vieira, Antônio Diogo Silva; Bedani, Raquel; Saad, Susana Marta Isay


    The effect of açai pulp ice cream and of its supplementation with inulin (I), whey protein concentrate (WC), and/or whey protein isolate (WI) on the viability and resistance to simulated gastrointestinal stress of the probiotic Lactobacillus (Lb.) rhamnosus GG strain throughout storage at -18 °C for up to 112 days was evaluated and morphological changes during stress were monitored. Lb. rhamnosus GG viability was stable in all formulations for up to 112 days of storage, preserving populations around 9 log CFU g-1. Compared to the fresh culture, Lb. rhamnosus GG showed higher survival under simulated gastrointestinal conditions when incorporated into açai ice cream, indicating that the presence of the food matrix contributed to the microorganism survival. A reduction of at least 5 log cycles of Lb. rhamnosus GG was observed in all formulations after the gastrointestinal simulation in all storage periods assessed. The addition of I, WC, and/or WI did not show any significant effect on the probiotic survival under simulated gastrointestinal stress (p ice cream. Thus, the açai pulp ice cream was shown to be a suitable matrix for Lb. rhamnosus GG, improving its survival under in vitro simulated gastrointestinal conditions.

  4. Neuromechanical simulation

    Directory of Open Access Journals (Sweden)

    Donald H Edwards


    Full Text Available The importance of the interaction between the body and the brain for the control of behavior has been recognized in recent years with the advent of neuromechanics, a field in which the coupling between neural and biomechanical processes is an explicit focus. A major tool used in neuromechanics is simulation, which connects computational models of neural circuits to models of an animal’s body situated in a virtual physical world. This connection closes the feedback loop that links the brain, the body, and the world through sensory stimuli, muscle contractions and body movement. Neuromechanical simulations enable investigators to explore the dynamical relationships between the brain, the body, and the world in ways that are difficult or impossible through experiment alone. Studies in a variety of animals have permitted the analysis of extremely complex and dynamic neuromechanical systems, they have demonstrated that the nervous system functions synergistically with the mechanical properties of the body, they have examined hypotheses that are difficult to test experimentally, and they have explored the role of sensory feedback in controlling complex mechanical systems with many degrees of freedom. Each of these studies confronts a common set of questions: (i how to abstract key features of the body, the world and the CNS in a useful model, (ii how to ground model parameters in experimental reality, (iii how to optimize the model and identify points of sensitivity and insensitivity, and (iv how to share neuromechanical models for examination, testing, and extension by others.

  5. Survival of Clostridium perfringens During Simulated Transport and Stability of Some Plasmid-borne Toxin Genes under Aerobic Conditions

    Directory of Open Access Journals (Sweden)

    Johansson A


    Full Text Available Clostridium perfringens is a pathogen of great concern in veterinary medicine, because it causes enteric diseases and different types of toxaemias in domesticated animals. It is important that bacteria in tissue samples, which have been collected in the field, survive and for the classification of C. perfringens into the correct toxin group, it is crucial that plasmid-borne genes are not lost during transportation or in the diagnostic laboratory. The objectives of this study were to investigate the survival of C. perfringens in a simulated transport of field samples and to determine the stability of the plasmid-borne toxin genes cpb1 and etx after storage at room temperature and at 4°C. Stability of the plasmid-borne genes cpb1 and etx of C. perfringens CCUG 2035, and cpb2 from C. perfringens CIP 106526, JF 2255 and 6 field isolates in aerobic atmosphere was also studied. Survival of C. perfringens was similar in all experiments. The cpb1 and etx genes were detected in all isolates from samples stored either at room temperature or at 4°C for 24–44 h. Repeated aerobic treatment of C. perfringens CCUG 2035 and CIP 106526 did not result in the loss of the plasmid-borne genes cpb1, cpb2 or etx. Plasmid-borne genes in C. perfringens were found to be more stable than generally reported. Therefore, C. perfringens toxinotyping by PCR can be performed reliably, as the risk of plasmid loss seems to be a minor problem.

  6. Survival of Clostridium perfringens During Simulated Transport and Stability of Some Plasmid-borne Toxin Genes under Aerobic Conditions

    Directory of Open Access Journals (Sweden)

    Johansson K-E


    Full Text Available Clostridium perfringens is a pathogen of great concern in veterinary medicine, because it causes enteric diseases and different types of toxaemias in domesticated animals. It is important that bacteria in tissue samples, which have been collected in the field, survive and for the classification of C. perfringens into the correct toxin group, it is crucial that plasmid-borne genes are not lost during transportation or in the diagnostic laboratory. The objectives of this study were to investigate the survival of C. perfringens in a simulated transport of field samples and to determine the stability of the plasmid-borne toxin genes cpb1 and etx after storage at room temperature and at 4°C. Stability of the plasmid-borne genes cpb1 and etx of C. perfringens CCUG 2035, and cpb2 from C. perfringens CIP 106526, JF 2255 and 6 field isolates in aerobic atmosphere was also studied. Survival of C. perfringens was similar in all experiments. The cpb1 and etx genes were detected in all isolates from samples stored either at room temperature or at 4°C for 24–44 h. Repeated aerobic treatment of C. perfringens CCUG 2035 and CIP 106526 did not result in the loss of the plasmid-borne genes cpb1, cpb2 or etx. Plasmid-borne genes in C. perfringens were found to be more stable than generally reported. Therefore, C. perfringens toxinotyping by PCR can be performed reliably, as the risk of plasmid loss seems to be a minor problem.

  7. Comparing simulation results of SBML capable simulators (United States)

    Bergmann, Frank T.; Sauro, Herbert M.


    Motivation: Simulations are an essential tool when analyzing biochemical networks. Researchers and developers seeking to refine simulation tools or develop new ones would benefit greatly from being able to compare their simulation results. Summary: We present an approach to compare simulation results between several SBML capable simulators and provide a website for the community to share simulation results. Availability: The website with simulation results and additional material can be found under: The software used to generate the simulation results is available on the website for download. Contact: PMID:18579569

  8. COLIWAVE a simulation model for survival of E. coli O157 : H7 in dairy manure and manure-amended soil

    NARCIS (Netherlands)

    Semenov, Alexander V.; Franz, Eelco; van Bruggen, Ariena H. C.


    A simulation model was developed to investigate the relative effects of temperature, oxygen concentration, substrate content and competition by autochthonous microbial community on the oscillatory behaviour and survival of Escherichia coli O157:H7 in manure and manure-amended soil. The overall

  9. Coliwave a simulation model for survival of E.coli 0157:H7 in dairy manure and manure-amended soil

    NARCIS (Netherlands)

    Semenov, A.V.; Franz, E.; Bruggen, van A.H.C.


    A simulation model was developed to investigate the relative effects of temperature, oxygen concentration, substrate content and competition by autochthonous microbial community on the oscillatory behaviour and survival of Escherichia coli O157:H7 in manure and manure-amended soil. The overall

  10. Acid and low temperature treatments on Salmonella Enteritidis inoculated in pork and its subsequent survival in simulated gastric fluid

    Directory of Open Access Journals (Sweden)

    Simone Quintão Silva


    Full Text Available ABSTRACT: The objective of this study was to evaluate the acid resistance of Salmonella enterica serovar Enteritidis (S. Enteritidis in stored pork and in simulated gastric fluid (SGF. A culture of S. Enteritidis was subjected to acid treatment prior to inoculation into pork, stored under refrigeration at frozen temperatures and exposed to SGF. The S. Enteritidis CCS3 and ATCC 13076 strains previously subjected to acid treatment (at pH 4.0-5.0 were inoculated in pork and stored at 4°C and -18°C. Storage at 4ºC did not affect the populations of both S. Enteritidis strains. After 84 days at -18°C, the mean population of both CCS3 and ATCC strains were reduced by 0.8 and 1.5 log cycles, respectively. Prior acid treatment did not enhance the survival of both strains at low temperatures. After acid treatment and low temperature storage, S. Enteritidis ATCC 13076 lost culturability after being exposed to SGF for 10 minutes. In contrast, S. Enteritidis CCS3 was tolerant until three hours of SGF exposure. S. Enteritidis CCS3 submitted to pH 4.0 was more tolerant to SGF exposure than when submitted to pH 4.5, 5.0 and without acid treatment. Therefore, this study indicates that exposure to an acidic and cold environment during processing enhanced the ability of S. Enteritidis to survive in the gastric environment of the human stomach, possibly increasing the risk of a Salmonella infection after consumption of pork.

  11. Simulated Breeding (United States)

    Unemi, Tatsuo

    This chapter describes a basic framework of simulated breeding, a type of interactive evolutionary computing to breed artifacts, whose origin is Blind Watchmaker by Dawkins. These methods make it easy for humans to design a complex object adapted to his/her subjective criteria, just similarly to agricultural products we have been developing over thousands of years. Starting from randomly initialized genome, the solution candidates are improved through several generations with artificial selection. The graphical user interface helps the process of breeding with techniques of multifield user interface and partial breeding. The former improves the diversity of individuals that prevents being trapped at local optimum. The latter makes it possible for the user to fix features he/she already satisfied. These methods were examined through artistic applications by the author: SBART for graphics art and SBEAT for music. Combining with a direct genome editor and exportation to another graphical or musical tool on the computer, they can be powerful tools for artistic creation. These systems may contribute to the creation of a type of new culture.

  12. Survival of endospores of Bacillus subtilis on spacecraft surfaces under simulated martian environments: implications for the forward contamination of Mars (United States)

    Schuerger, Andrew C.; Mancinelli, Rocco L.; Kern, Roger G.; Rothschild, Lynn J.; McKay, Christopher P.


    Experiments were conducted in a Mars simulation chamber (MSC) to characterize the survival of endospores of Bacillus subtilis under high UV irradiation and simulated martian conditions. The MSC was used to create Mars surface environments in which pressure (8.5 mb), temperature (-80, -40, -10, or +23 degrees C), gas composition (Earth-normal N2/O2 mix, pure N2, pure CO2, or a Mars gas mix), and UV-VIS-NIR fluence rates (200-1200 nm) were maintained within tight limits. The Mars gas mix was composed of CO2 (95.3%), N2 (2.7%), Ar (1.7%), O2 (0.2%), and water vapor (0.03%). Experiments were conducted to measure the effects of pressure, gas composition, and temperature alone or in combination with Mars-normal UV-VIS-NIR light environments. Endospores of B. subtilis, were deposited on aluminum coupons as monolayers in which the average density applied to coupons was 2.47 x 10(6) bacteria per sample. Populations of B. subtilis placed on aluminum coupons and subjected to an Earth-normal temperature (23 degrees C), pressure (1013 mb), and gas mix (normal N2/O2 ratio) but illuminated with a Mars-normal UV-VIS-NIR spectrum were reduced by over 99.9% after 30 sec exposure to Mars-normal UV fluence rates. However, it required at least 15 min of Mars-normal UV exposure to reduce bacterial populations on aluminum coupons to non-recoverable levels. These results were duplicated when bacteria were exposed to Mars-normal environments of temperature (-10 degrees C), pressure (8.5 mb), gas composition (pure CO2), and UV fluence rates. In other experiments, results indicated that the gas composition of the atmosphere and the temperature of the bacterial monolayers at the time of Mars UV exposure had no effects on the survival of bacterial endospores. But Mars-normal pressures (8.5 mb) were found to reduce survival by approximately 20-35% compared to Earth-normal pressures (1013 mb). The primary implications of these results are (a) that greater than 99.9% of bacterial populations on

  13. Effects of willow hybridisation and simulated browsing on the development and survival of the leaf beetle Phratora vitellinae

    Directory of Open Access Journals (Sweden)

    Hallgren Per


    Full Text Available Abstract Background Interspecific hybridisation is common between many plant species and causes rapid changes in a variety of plant characters. This may pose problems for herbivores because changes in recognition characters may be poorly correlated with changes in quality characters. Many studies have examined different systems of hybrids and herbivores in attempts to understand the role of hybridisation in the evolution of plant resistance. The results from different systems are variable. Studies of hybrids between Salix caprea (L., Salicaceae and S. repens show that they are intermediate between the two parental species in most resistence characters. However, a plants herbivore resistence depends also on its biotic and abiotic environment. Important biotic factors that may influence plant growth and plant chemistry include the interactions between different herbivores that occur through their exploitation of common host plants. Although the effects on plants of previous herbivory are likely to be strongly affected by environmental conditions, they are also species-specific. Damage may therefore have different effects on hybrids than on their parental species, and this could influence the performance of herbivores on pure and hybrid species of plants. To evaluate the effects of hybridisation on insect performance, the development and survival rates of Phratora vitellinae (L. 1758, Coleoptera: Chrysomelidae larvae on pure S. repens, pure S. caprea and Fl hybrids of the two species was monitored. Further, to examine the effect of herbivorous mammals on the performance of the larvae, plants were damaged to simulate winter foraging by voles or spring leaf stripping by moose. Results The results show that development rates were highest on S. repens and equally low on S. caprea and the Fl hybrid. In addition, development of the plants treated to simulate mammalian herbivore damage was slower than that of corresponding controls. Conclusions The

  14. Microencapsulation of Lactobacillus rhamnosus GG by Transglutaminase Cross-Linked Soy Protein Isolate to Improve Survival in Simulated Gastrointestinal Conditions and Yoghurt. (United States)

    Li, Chun; Wang, Chun-Ling; Sun, Yu; Li, Ai-Li; Liu, Fei; Meng, Xiang-Chen


    Microencapsulation is an effective way to improve the survival of probiotics in simulated gastrointestinal (GI) conditions and yoghurt. In this study, microencapsulation of Lactobacillus rhamnosus GG (LGG) was prepared by first cross-linking of soy protein isolate (SPI) using transglutaminase (TGase), followed by embedding the bacteria in cross-linked SPI, and then freeze-drying. The survival of microencapsulated LGG was evaluated in simulated GI conditions and yoghurt. The results showed that a high microencapsulation yield of 67.4% was obtained. The diameter of the microencapsulated LGG was in the range of 52.83 to 275.16 μm. Water activity did not differ between free and microencapsulated LGG after freeze-drying. The survival of microencapsulated LGG under simulated gastric juice (pH 2.5 and 3.6), intestinal juice (0.3% and 2% bile salt) and storage at 4 °C were significantly higher than that of free cells. The survival of LGG in TGase cross-linked SPI microcapsules was also improved to 14.5 ± 0.5% during storage in yoghurt. The microencapsulation of probiotics by TGase-treated SPI can be a suitable alternative to polysaccharide gelation technologies. © 2016 Institute of Food Technologists®

  15. Manned Flight Simulator (MFS) (United States)

    Federal Laboratory Consortium — The Aircraft Simulation Division, home to the Manned Flight Simulator (MFS), provides real-time, high fidelity, hardware-in-the-loop flight simulation capabilities...


    LSPC is the Loading Simulation Program in C++, a watershed modeling system that includes streamlined Hydrologic Simulation Program Fortran (HSPF) algorithms for simulating hydrology, sediment, and general water quality

  17. Helping Mothers Survive Bleeding After Birth: retention of knowledge, skills, and confidence nine months after obstetric simulation-based training

    NARCIS (Netherlands)

    Nelissen, E.J.T.; Ersdal, H.; Mduma, E.; Evjen-Olsen, B.; Broerse, J.E.W.; van Roosmalen, J.; Stekelenburg, J.


    Background: It is important to know the decay of knowledge, skills, and confidence over time to provide evidence-based guidance on timing of follow-up training. Studies addressing retention of simulation-based education reveal mixed results. The aim of this study was to measure the level of

  18. Helping Mothers Survive Bleeding After Birth : retention of knowledge, skills, and confidence nine months after obstetric simulation-based training

    NARCIS (Netherlands)

    Nelissen, Ellen; Ersdal, Hege; Mduma, Estomih; Evjen-Olsen, Bjorg; Broerse, Jacqueline; van Roosmalen, Jos; Stekelenburg, Jelle


    Background: It is important to know the decay of knowledge, skills, and confidence over time to provide evidence-based guidance on timing of follow-up training. Studies addressing retention of simulation-based education reveal mixed results. The aim of this study was to measure the level of

  19. Survival of Moss Reproductive Structures under Simulated Martian Environmental Conditions and Extreme Thermal Stress: Vibrational Spectroscopic Study and Astrobiological Implications


    Gómez Gómez, José María; Estébanez, Belén; Sanz-Arranz, Aurelio; Mateo-Martí, Eva; Medina, Jesús; Rull, Fernando


    The principal goal of astrobiology is the search for extraterrestrial life forms. A key aspect is the study of the ability of different kinds of terrestrial organisms to support simulated extraterrestrial environmental conditions. Mosses are multicellular green plants, poorly studied from an astrobiological perspective. In this paper, we report experimental results obtained using two species of moss, which demonstrate that both the spores of the moss Funaria hygrometrica as well a...

  20. Parallel discrete event simulation

    NARCIS (Netherlands)

    Overeinder, B.J.; Hertzberger, L.O.; Sloot, P.M.A.; Withagen, W.J.


    In simulating applications for execution on specific computing systems, the simulation performance figures must be known in a short period of time. One basic approach to the problem of reducing the required simulation time is the exploitation of parallelism. However, in parallelizing the simulation

  1. Combine Harvester Simulator

    DEFF Research Database (Denmark)

    Vilmann, Ole; Sørlie, James Arnold


    A simulator for training pilots in the operation of a modern high-tech combine harvester is presented. The new simulator application is based on DMI´s well-known DMS maritime simulator architecture. Two major challenges have been encountered in the development of the simulator: 1) interfacing the...

  2. COCOA: Simulating Observations of Star Cluster Simulations (United States)

    Askar, Abbas; Giersz, Mirek; Pych, Wojciech; Dalessandro, Emanuele


    COCOA (Cluster simulatiOn Comparison with ObservAtions) creates idealized mock photometric observations using results from numerical simulations of star cluster evolution. COCOA is able to present the output of realistic numerical simulations of star clusters carried out using Monte Carlo or N-body codes in a way that is useful for direct comparison with photometric observations. The code can simulate optical observations from simulation snapshots in which positions and magnitudes of objects are known. The parameters for simulating the observations can be adjusted to mimic telescopes of various sizes. COCOA also has a photometry pipeline that can use standalone versions of DAOPHOT (ascl:1104.011) and ALLSTAR to produce photometric catalogs for all observed stars.

  3. The ATLAS Simulation Infrastructure

    CERN Document Server

    Aad, G.; Abdallah, J.; Abdelalim, A.A.; Abdesselam, A.; Abdinov, O.; Abi, B.; Abolins, M.; Abramowicz, H.; Abreu, H.; Acharya, B.S.; Adams, D.L.; Addy, T.N.; Adelman, J.; Adorisio, C.; Adragna, P.; Adye, T.; Aefsky, S.; Aguilar-Saavedra, J.A.; Aharrouche, M.; Ahlen, S.P.; Ahles, F.; Ahmad, A.; Ahmed, H.; Ahsan, M.; Aielli, G.; Akdogan, T.; Akesson, T.P.A.; Akimoto, G.; Akimov, A.V.; Aktas, A.; Alam, M.S.; Alam, M.A.; Albrand, S.; Aleksa, M.; Aleksandrov, I.N.; Alexa, C.; Alexander, G.; Alexandre, G.; Alexopoulos, T.; Alhroob, M.; Aliev, M.; Alimonti, G.; Alison, J.; Aliyev, M.; Allport, P.P.; Allwood-Spiers, S.E.; Almond, J.; Aloisio, A.; Alon, R.; Alonso, A.; Alviggi, M.G.; Amako, K.; Amelung, C.; Amorim, A.; Amoros, G.; Amram, N.; Anastopoulos, C.; Andeen, T.; Anders, C.F.; Anderson, K.J.; Andreazza, A.; Andrei, V.; Anduaga, X.S.; Angerami, A.; Anghinolfi, F.; Anjos, N.; Annovi, A.; Antonaki, A.; Antonelli, M.; Antonelli, S.; Antos, J.; Antunovic, B.; Anulli, F.; Aoun, S.; Arabidze, G.; Aracena, I.; Arai, Y.; Arce, A.T.H.; Archambault, J.P.; Arfaoui, S.; Arguin, J-F.; Argyropoulos, T.; Arik, M.; Armbruster, A.J.; Arnaez, O.; Arnault, C.; Artamonov, A.; Arutinov, D.; Asai, M.; Asai, S.; Asfandiyarov, R.; Ask, S.; Asman, B.; Asner, D.; Asquith, L.; Assamagan, K.; Astbury, A.; Astvatsatourov, A.; Atoian, G.; Auerbach, B.; Augsten, K.; Aurousseau, M.; Austin, N.; Avolio, G.; Avramidou, R.; Axen, D.; Ay, C.; Azuelos, G.; Azuma, Y.; Baak, M.A.; Bach, A.M.; Bachacou, H.; Bachas, K.; Backes, M.; Badescu, E.; Bagnaia, P.; Bai, Y.; Bain, T.; Baines, J.T.; Baker, O.K.; Baker, M.D.; Baker, S; Baltasar Dos Santos Pedrosa, F.; Banas, E.; Banerjee, P.; Banerjee, S.; Banfi, D.; Bangert, A.; Bansal, V.; Baranov, S.P.; Baranov, S.; Barashkou, A.; Barber, T.; Barberio, E.L.; Barberis, D.; Barbero, M.; Bardin, D.Y.; Barillari, T.; Barisonzi, M.; Barklow, T.; Barlow, N.; Barnett, B.M.; Barnett, R.M.; Baroncelli, A.; Barr, A.J.; Barreiro, F.; Barreiro Guimaraes da Costa, J.; Barrillon, P.; 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Urkovsky, E.; Urquijo, P.; Urrejola, P.; Usai, G.; Uslenghi, M.; Vacavant, L.; Vacek, V.; Vachon, B.; Vahsen, S.; Valente, P.; Valentinetti, S.; Valkar, S.; Valladolid Gallego, E.; Vallecorsa, S.; Valls Ferrer, J.A.; Van Berg, R.; van der Graaf, H.; van der Kraaij, E.; van der Poel, E.; van der Ster, D.; van Eldik, N.; van Gemmeren, P.; van Kesteren, Z.; van Vulpen, I.; Vandelli, W.; Vaniachine, A.; Vankov, P.; Vannucci, F.; Vari, R.; Varnes, E.W.; Varouchas, D.; Vartapetian, A.; Varvell, K.E.; Vasilyeva, L.; Vassilakopoulos, V.I.; Vazeille, F.; Vellidis, C.; Veloso, F.; Veneziano, S.; Ventura, A.; Ventura, D.; Venturi, M.; Venturi, N.; Vercesi, V.; Verducci, M.; Verkerke, W.; Vermeulen, J.C.; Vetterli, M.C.; Vichou, I.; Vickey, T.; Viehhauser, G.H.A.; Villa, M.; Villani, E.G.; Villaplana Perez, M.; Vilucchi, E.; Vincter, M.G.; Vinek, E.; Vinogradov, V.B.; Viret, S.; Virzi, J.; Vitale, A.; Vitells, O.; Vivarelli, I.; Vives Vaque, F.; Vlachos, S.; Vlasak, M.; Vlasov, N.; Vogel, A.; Vokac, P.; Volpi, M.; von der Schmitt, H.; von Loeben, J.; von Radziewski, H.; von Toerne, E.; Vorobel, V.; Vorwerk, V.; Vos, M.; Voss, R.; Voss, T.T.; Vossebeld, J.H.; Vranjes, N.; Vranjes Milosavljevic, M.; Vrba, V.; Vreeswijk, M.; Vu Anh, T.; Vudragovic, D.; Vuillermet, R.; Vukotic, I.; Wagner, P.; Walbersloh, J.; Walder, J.; Walker, R.; Walkowiak, W.; Wall, R.; Wang, C.; Wang, H.; Wang, J.; Wang, S.M.; Warburton, A.; Ward, C.P.; Warsinsky, M.; Wastie, R.; Watkins, P.M.; Watson, A.T.; Watson, M.F.; Watts, G.; Watts, S.; Waugh, A.T.; Waugh, B.M.; Weber, M.D.; Weber, M.; Weber, M.S.; Weber, P.; Weidberg, A.R.; Weingarten, J.; Weiser, C.; Wellenstein, H.; Wells, P.S.; Wen, M.; Wenaus, T.; Wendler, S.; Wengler, T.; Wenig, S.; Wermes, N.; Werner, M.; Werner, P.; Werth, M.; Werthenbach, U.; Wessels, M.; Whalen, K.; White, A.; White, M.J.; White, S.; Whitehead, S.R.; Whiteson, D.; Whittington, D.; Wicek, F.; Wicke, D.; Wickens, F.J.; Wiedenmann, W.; Wielers, M.; Wienemann, P.; Wiglesworth, C.; Wiik, L.A.M.; Wildauer, A.; Wildt, M.A.; Wilkens, H.G.; Williams, E.; Williams, H.H.; Willocq, S.; Wilson, J.A.; Wilson, M.G.; Wilson, A.; Wingerter-Seez, I.; Winklmeier, F.; Wittgen, M.; Wolter, M.W.; Wolters, H.; Wosiek, B.K.; Wotschack, J.; Woudstra, M.J.; Wraight, K.; Wright, C.; Wright, D.; Wrona, B.; Wu, S.L.; Wu, X.; Wulf, E.; Wynne, B.M.; Xaplanteris, L.; Xella, S.; Xie, S.; Xu, D.; Xu, N.; Yamada, M.; Yamamoto, A.; Yamamoto, K.; Yamamoto, S.; Yamamura, T.; Yamaoka, J.; Yamazaki, T.; Yamazaki, Y.; Yan, Z.; Yang, H.; Yang, U.K.; Yang, Z.; Yao, W-M.; Yao, Y.; Yasu, Y.; Ye, J.; Ye, S.; Yilmaz, M.; Yoosoofmiya, R.; Yorita, K.; Yoshida, R.; Young, C.; Youssef, S.P.; Yu, D.; Yu, J.; Yuan, L.; Yurkewicz, A.; Zaidan, R.; Zaitsev, A.M.; Zajacova, Z.; Zambrano, V.; Zanello, L.; Zaytsev, A.; Zeitnitz, C.; Zeller, M.; Zemla, A.; Zendler, C.; Zenin, O.; Zenis, T.; Zenonos, Z.; Zenz, S.; Zerwas, D.; Zevi della Porta, G.; Zhan, Z.; Zhang, H.; Zhang, J.; Zhang, Q.; Zhang, X.; Zhao, L.; Zhao, T.; Zhao, Z.; Zhemchugov, A.; Zhong, J.; Zhou, B.; Zhou, N.; Zhou, Y.; Zhu, C.G.; Zhu, H.; Zhu, Y.; Zhuang, X.; Zhuravlov, V.; Zimmermann, R.; Zimmermann, S.; Zimmermann, S.; Ziolkowski, M.; Zivkovic, L.; Zobernig, G.; Zoccoli, A.; zur Nedden, M.; Zutshi, V.


    The simulation software for the ATLAS Experiment at the Large Hadron Collider is being used for large-scale production of events on the LHC Computing Grid. This simulation requires many components, from the generators that simulate particle collisions, through packages simulating the response of the various detectors and triggers. All of these components come together under the ATLAS simulation infrastructure. In this paper, that infrastructure is discussed, including that supporting the detector description, interfacing the event generation, and combining the GEANT4 simulation of the response of the individual detectors. Also described are the tools allowing the software validation, performance testing, and the validation of the simulated output against known physics processes.

  4. Error and efficiency of simulated tempering simulations. (United States)

    Rosta, Edina; Hummer, Gerhard


    We derive simple analytical expressions for the error and computational efficiency of simulated tempering (ST) simulations. The theory applies to the important case of systems whose dynamics at long times is dominated by the slow interconversion between two metastable states. An extension to the multistate case is described. We show that the relative gain in efficiency of ST simulations over regular molecular dynamics (MD) or Monte Carlo (MC) simulations is given by the ratio of their reactive fluxes, i.e., the number of transitions between the two states summed over all ST temperatures divided by the number of transitions at the single temperature of the MD or MC simulation. This relation for the efficiency is derived for the limit in which changes in the ST temperature are fast compared to the two-state transitions. In this limit, ST is most efficient. Our expression for the maximum efficiency gain of ST simulations is essentially identical to the corresponding expression derived by us for replica exchange MD and MC simulations [E. Rosta and G. Hummer, J. Chem. Phys. 131, 165102 (2009)] on a different route. We find quantitative agreement between predicted and observed efficiency gains in a test against ST and replica exchange MC simulations of a two-dimensional Ising model. Based on the efficiency formula, we provide recommendations for the optimal choice of ST simulation parameters, in particular, the range and number of temperatures, and the frequency of attempted temperature changes.

  5. Systems Engineering Simulator (SES) Simulator Planning Guide (United States)

    McFarlane, Michael


    The simulation process, milestones and inputs are unknowns to first-time users of the SES. The Simulator Planning Guide aids in establishing expectations for both NASA and non-NASA facility customers. The potential audience for this guide includes both internal and commercial spaceflight hardware/software developers. It is intended to assist their engineering personnel in simulation planning and execution. Material covered includes a roadmap of the simulation process, roles and responsibilities of facility and user, major milestones, facility capabilities, and inputs required by the facility. Samples of deliverables, facility interfaces, and inputs necessary to define scope, cost, and schedule are included as an appendix to the guide.

  6. The influence of design characteristics on statistical inference in nonlinear estimation: A simulation study based on survival data and hazard modeling

    DEFF Research Database (Denmark)

    Andersen, J.S.; Bedaux, J.J.M.; Kooijman, S.A.L.M.


    This paper describes the influence of design characteristics on the statistical inference for an ecotoxicological hazard-based model using simulated survival data. The design characteristics of interest are the number and spacing of observations (counts) in time, the number and spacing of exposure...... concentrations (within c(min) and c(max)), and the initial number of individuals at time 0 in each concentration. A comparison of the coverage probabilities for confidence limits arising from the profile-likelihood approach and the Wald-based approach is carried out. The Wald-based approach is very sensitive...

  7. Survival of Lactobacillus acidophilus NCFM® and Bifidobacterium lactis HN019 encapsulated in chocolate during in vitro simulated passage of the upper gastrointestinal tract

    DEFF Research Database (Denmark)

    Klindt-Toldam, Stine; Larsen, Susanne K.; Saaby, Lasse


    of the upper gastro-intestinal tract using both a static and a dynamic gastric in vitro model. Lactobacillus acidophilus NCFM® and Bifidobacterium lactis HN019 equalling a total concentration of 2 × 108, 2 × 109 and 2 × 1010 CFU/g chocolate were added to samples of milk chocolate, 57% and 72% dark chocolate...... dairy and juice based probiotic products, chocolate was an excellent carrier for probiotic delivery, because of very good survival of probiotics during simulated passage of the upper GI tract. The viability of B. lactis was slightly higher than Lb. acidophilus and survival rates were >6.5 log CFU...


    U.S. Environmental Protection Agency — LSPC is the Loading Simulation Program in C++, a watershed modeling system that includes streamlined Hydrologic Simulation Program Fortran (HSPF) algorithms for...

  9. USU Patient Simulation Center (United States)

    Federal Laboratory Consortium — he National Capital Area (NCA) Medical Simulation Center is a state-of-the-art training facility located near the main USU campus. It uses simulated patients (i.e.,...

  10. Design by simulation

    NARCIS (Netherlands)

    Heerkens, Johannes M.G.


    Examines the contributions of the Dutch National Aerospace laboratory to the development of simulation research methodology. Issues to consider in the development of measuring instruments; Simulator networking; Use of subjective data to validate research.

  11. GPS Satellite Simulation Facility (United States)

    Federal Laboratory Consortium — The GPS satellite simulation facility consists of a GPS satellite simulator controlled by either a Silicon Graphics Origin 2000 or PC depending upon unit under test...

  12. Eye Disease Simulations (United States)

    ... USAJobs Home > Eye Health Information > Eye Disease Simulations Eye Disease Simulations Age-Related Macular Degeneration Cataract Diabetic ... information page Back to top Diabetic Retinopathy Diabetic Eye Disease information page Back to top Glaucoma Glaucoma ...

  13. Ride Motion Simulator (RMS) (United States)

    Federal Laboratory Consortium — The RMS is a simulator designed for crew station and man-in-the-loop experimentation. The simulator immerses users in a synthetic battlefield to experience realistic...

  14. Airflow Simulation Techniques

    DEFF Research Database (Denmark)

    Nielsen, Peter V.

    The paper describes the development in airflow simulations in rooms . The research is, as other areas of flow research, influenced by the decreasing cost of computation which seems to indicate an increased use of airflow simulation in the coming years....

  15. Traffic management simulation development. (United States)


    Microscopic simulation can provide significant support to traffic management center (TMC) operations. However, traffic simulation applications require data that are expensive and time-consuming to collect. Data collected by TMCs can be used as a prim...

  16. Discrete Event Simulation

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 18; Issue 1. Discrete Event Simulation. Matthew Jacob ... Keywords. Simulation; modelling; computer programming. Author Affiliations. Matthew Jacob1. Department of Computer Science and Automation, Indian Institute of Science, Bangalore 560 012.

  17. Simulation Interoperability (Interoperabilite de la simulation) (United States)


    relatives aux environnements de simulation distribuée se concentrent principalement sur les niveaux technique, syntaxique et (dans une certaine mesure...l’automatisation relative du développement, de l’intégration et de la mise en œuvre des environnements de simulation distribuée. Cela exige une...normalisation des applicatifs créés pendant le développement d’un environnement de simulation, à la suite, par exemple, du DSEEP. Ces produits normalisés

  18. Extended Survival of Several Microorganisms and Relevant Amino Acid Biomarkers under Simulated Martian Surface Conditions as a Function of Burial Depth

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Adam [Indiana University; Pratt, L.M. [Indiana University; Vishnivetskaya, Tatiana A [ORNL; Pfiffner, S. M. [University of Tennessee, Knoxville (UTK); Bryan, R. A. [Yeshiva University, New York; Dadachova, E. [Yeshiva University, New York; Whyte, L G [McGill University, Montreal, Quebec; Radtke, K. [McGill University, Montreal, Quebec; Chan, E. [Princeton University; Tronick, S. [Princeton University; Borgonie, G. [Ghent University, Belgium; Mancinelli, R. [SETI Institute; Rothschild, L. [NASA Ames Research Center; Rogoff, D. [NASA Ames Research Center; Horikawa, D. D. [NASA Ames Research Center; Onstott, T. C. [Princeton University


    Recent orbital and landed missions have provided substantial evidence for ancient liquid water on the martian surface as well as evidence of more recent sedimentary deposits formed by water and/or ice. These observations raise serious questions regarding an independent origin and evolution of life on Mars. Future missions seek to identify signs of extinct martian biota in the form of biomarkers or morphological characteristics, but the inherent danger of spacecraft-borne terrestrial life makes the possibility of forward contamination a serious threat not only to the life detection experiments, but also to any extant martian ecosystem. A variety of cold and desiccation-tolerant organisms were exposed to 40 days of simulated martian surface conditions while embedded within several centimeters of regolith simulant in order to ascertain the plausibility of such organisms survival as a function of environmental parameters and burial depth. Relevant amino acid biomarkers associated with terrestrial life were also analyzed in order to understand the feasibility of detecting chemical evidence for previous biological activity. Results indicate that stresses due to desiccation and oxidation were the primary deterrent to organism survival, and that the effects of UV-associated damage, diurnal temperature variations, and reactive atmospheric species were minimal. Organisms with resistance to desiccation and radiation environments showed increased levels of survival after the experiment compared to organisms characterized as psychrotolerant. Amino acid analysis indicated the presence of an oxidation mechanism that migrated downward through the samples during the course of the experiment and likely represents the formation of various oxidizing species at mineral surfaces as water vapor diffused through the regolith. Current sterilization protocols may specifically select for organisms best adapted to survival at the martian surface, namely species that show tolerance to radical

  19. Can Next-Generation Vehicles Sustainably Survive in the Automobile Market? Evidence from Ex-Ante Market Simulation and Segmentation

    Directory of Open Access Journals (Sweden)

    Jungwoo Shin


    Full Text Available Introduced autonomous and connected vehicles equipped with emerging technologies are expected to change the automotive market. In this study, using stated preference (SP data collected from choice experiments conducted in Korea with a mixed multiple discrete-continuous extreme value model (MDCEV, we analyzed how the advent of next-generation of vehicles with advanced vehicle technologies would affect consumer vehicle choices and usage patterns. Additionally, ex-ante market simulations and market segmentation analyses were conducted to provide specific management strategies for next-generation vehicles. The results showed that consumer preference structures of conventional and alternative fuel types primarily differed depending on whether they were drivers or non-drivers. Additionally, although the introduction of electric vehicles to the automobile market is expected to negatively affect the choice probability and mileage of other vehicles, it could have a positive influence on the probability of purchasing an existing conventional vehicle if advanced vehicle technologies are available.

  20. EMC Simulation and Modeling (United States)

    Takahashi, Takehiro; Schibuya, Noboru

    The EMC simulation is now widely used in design stage of electronic equipment to reduce electromagnetic noise. As the calculated electromagnetic behaviors of the EMC simulator depends on the inputted EMC model of the equipment, the modeling technique is important to obtain effective results. In this paper, simple outline of the EMC simulator and EMC model are described. Some modeling techniques of EMC simulation are also described with an example of the EMC model which is shield box with aperture.

  1. Distribution system simulator (United States)

    Bahrami, K. A.; Kirkham, H.; Rahman, S.


    In a series of tests performed under the Department of Energy auspices, power line carrier propagation was observed to be anomalous under certain circumstances. To investigate the cause, a distribution system simulator was constructed. The simulator was a physical simulator that accurately represented the distribution system from below power frequency to above 50 kHz. Effects such as phase-to-phase coupling and skin effect were modeled. Construction details of the simulator, and experimental results from its use are presented.

  2. Simulating Supernova Light Curves

    Energy Technology Data Exchange (ETDEWEB)

    Even, Wesley Paul [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Dolence, Joshua C. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)


    This report discusses supernova light simulations. A brief review of supernovae, basics of supernova light curves, simulation tools used at LANL, and supernova results are included. Further, it happens that many of the same methods used to generate simulated supernova light curves can also be used to model the emission from fireballs generated by explosions in the earth’s atmosphere.

  3. Simulation and psychology

    DEFF Research Database (Denmark)

    Dieckmann, Peter; Krage, Ralf


    Psychology is relevant for improving the use of simulation in anesthesiology, as it allows us to describe, explain and optimize the interactions of learners and instructors as well as the design of simulation scenarios and debriefings. Much psychological expertise is not used for simulation...

  4. Teaching with simulations

    NARCIS (Netherlands)

    Rutten, N.P.G.


    This dissertation focuses on whole-class science teaching with computer simulations. Computer simulations display dynamic, visual representations of natural phenomena and can make a great contribution to the science classroom. Simulations can be used in multiple ways. Teachers who have an

  5. Encapsulation of probiotic Bifidobacterium longum BIOMA 5920 with alginate-human-like collagen and evaluation of survival in simulated gastrointestinal conditions. (United States)

    Su, Ran; Zhu, Xiao-Li; Fan, Dai-Di; Mi, Yu; Yang, Chan-Yuan; Jia, Xin


    Alginate (ALg)-human-like collagen (HLC) microspheres were prepared by the technology of electrostatic droplet generation in order to develop a biocompatible vehicle for probiotic bacteria. Microparticles were spherical with mean particle size of 400μm. The encapsulation efficiency (EE) of ALg-HLC microspheres could reach 92-99.2%. Water-soluble and fibrous human-like collagen is combined with sodium alginate through intermolecular hydrogen bonding and electrostatic force which were investigated by Fourier transform infrared spectroscopy (FTIR) and differential scanning calorimetry (DSC), thus the matrix of ALg-HLC was very stable. Bifidobacterium longum BIOMA 5920, as a kind of probiotic bacteria, was encapsulated with alginate-human-like collagen to survive and function in simulated gastrointestinal juice. Microparticles were very easy to degradation in simulated intestinal juices. After incubation in simulated gastric (pH 2.0, 2h), the encapsulated B. longum BIOMA 5920 numbers were 4.81 ± 0.38 log cfu/g. Copyright © 2011 Elsevier B.V. All rights reserved.

  6. Effect of Microencapsulation on Survival and Stability of Bifidobacterium bifidum BB01 Exposed to Simulated Gastrointestinal Conditions and in Different Food Matrices

    Directory of Open Access Journals (Sweden)

    Chen He


    Full Text Available Bifidobacterium bifidum BB01 was microencapsulated by extrusion method with sodium alginate. This paper aimed to study the survival rate of microencapsulating Bifidobacterium bifidum BB01 in simulated gastrointestinal conditions, resistance to artificial bile salt and stability during storage. Results showed non-microencapsulated Bifidobacterium bifidum BB01 were more susceptible than microencapsulated under simulated gastrointestinal conditions, and microencapsulated Bifidobacterium bifidum BB01 exhibited a lower population reduction than free cells during exposure to simulated gastrointestinal, The enteric test showed that the microorganism cells were released from the monolayer microcapsules, double microcapsules and trilayer completely in 40min. The viable counts of monolayer microcapsules, double layer microcapsules and triple layer microcapsules decreased by nine magnitudes, four magnitude and one magnitude after 2h, respectively. Moreover, in fruit orange, pure milk and nutrition Express, the optimum storage times of free Bifidobacterium bifidum BB01, monolayer microcapsules, double layer microcapsules and triple layer microcapsules were 21 days, 21 days, 28 days and more than 35 days at 4°C, but at room temperature the optimum storage time were 7 days, 14 days, 21 days and more than 28 days, and the viable counts were maintained at 1×106 CFU g−1 or more.

  7. Soymilk residue (okara as a natural immobilization carrier for Lactobacillus plantarum cells enhances soymilk fermentation, glucosidic isoflavone bioconversion, and cell survival under simulated gastric and intestinal conditions

    Directory of Open Access Journals (Sweden)

    Xia Xiudong


    Full Text Available Cell immobilization is an alternative to microencapsulation for the maintenance of cells in a liquid medium. However, artificial immobilization carriers are expensive and pose a high safety risk. Okara, a food-grade byproduct from soymilk production, is rich in prebiotics. Lactobacilli could provide health enhancing effects to the host. This study aimed to evaluate the potential of okara as a natural immobilizer for L. plantarum 70810 cells. The study also aimed to evaluate the effects of okara-immobilized L. plantarum 70810 cells (IL on soymilk fermentation, glucosidic isoflavone bioconversion, and cell resistance to simulated gastric and intestinal stresses. Scanning electron microscopy (SEM was used to show cells adherence to the surface of okara. Lactic acid, acetic acid and isoflavone analyses in unfermented and fermented soymilk were performed by HPLC with UV detection. Viability and growth kinetics of immobilized and free L. plantarum 70810 cells (FL were followed during soymilk fermentation. Moreover, changes in pH, titrable acidity and viscosity were measured by conventional methods. For in vitro testing of simulated gastrointestinal resistance, fermented soymilk was inoculated with FL or IL and an aliquot incubated into acidic MRS broth which was conveniently prepared to simulate gastric, pancreatic juices and bile salts. Survival to simulated gastric and intestinal stresses was evaluated by plate count of colony forming units on MRS agar. SEM revealed that the lactobacilli cells attached and bound to the surface of okara. Compared with FL, IL exhibited a significantly higher specific growth rate, shorter lag phase of growth, higher productions of lactic and acetic acids, a faster decrease in pH and increase in titrable acidity, and a higher soymilk viscosity. Similarly, IL in soymilk showed higher productions of daizein and genistein compared with the control. Compared with FL, IL showed reinforced resistance to simulatedgastric and

  8. Flow cytometric assessment of the protectants for enhanced in vitro survival of probiotic lactic acid bacteria through simulated human gastro-intestinal stresses. (United States)

    Chen, Song; Cao, Yu; Ferguson, Lynnette R; Shu, Quan; Garg, Sanjay


    The aim of this study was to apply flow cytometric (FCM) analysis to assess the use of sucrose and lecithin vesicles for the protection of probiotic lactic acid bacteria in response to the challenge of gastric acidity and bile salts. FCM analysis in combination with fluorescent probes carboxyfluorescein (cF) and propidium iodide was used to reveal the physiological heterogeneity in the stressed bacteria population. Three subpopulations (intact, stressed, and damaged) were differentiated by FCM in all six examined strains. Significant changes were observed in the presence of the selected protectants. The addition of 20 mM sucrose in the simulated gastric fluid substantially increased the number of intact cells over 20 folds and reduced the damaged subpopulation by half. The presence of 2 % (w/v) lecithin vesicles was shown to protect 50 % more intact cells from the challenge of bile salts. The improved survival as evaluated by FCM analysis was further assessed for the proliferation capacity by sorting a number of cells from each subpopulation on nutrient agar plate. The result confirmed conformity between the proliferation-based cultivability and the probe-indicated viability in the samples of the intact and the damaged subpopulations. However, it also revealed the complexities of the stressed (injured) subpopulation. In conclusion, FCM analysis confirmed that the selected protectants could improve the survival of the probiotic strains in the simulated GI environments. The FCM analysis also proved to be a useful analytical tool for the probiotics research.

  9. Short communication: Latin-style fresh cheese enhances lactic acid bacteria survival but not Listeria monocytogenes resistance under in vitro simulated gastrointestinal conditions. (United States)

    Silva, C C G; Domingos-Lopes, M F P; Magalhães, V A F; Freitas, D A S R; Coelho, M C; Rosa, H J D; Dapkevicius, M L N E


    Different studies in humans have provided evidence about the health benefits of probiotics. However, most probiotic strains do not maintain good viability in the harsh conditions of the gastrointestinal tract (GIT). In the present study, Latin-style fresh cheese produced with potential probiotic bacteria was tested to evaluate this cheese type as a food carrier for the delivery of viable microorganisms after exposure to simulated GIT conditions. The resistance of 28 lactic acid bacteria (LAB) strains and Listeria monocytogenes upon exposure to acidic conditions (pH 2.5) and bile and pancreatic enzymes (0.3% of bile salts and 0.1% of pancreatin) was evaluated in vitro. When compared with fresh cultures, fresh cheese greatly improved LAB survival to simulated GIT conditions, as no loss of viability was observed in either acidic conditions (pH 2.5) or bile salts and pancreatin environment over a 3-h period. In opposition, L. monocytogenes did not survive after 1h under acidic conditions. These data demonstrated that Latin-style fresh cheese could play an important role in probiotic protection against gastrointestinal juices, enhancing delivery within the gut and thereby maximizing potential health benefits of LAB. Copyright © 2015 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  10. Resolution exchange simulation. (United States)

    Lyman, Edward; Ytreberg, F Marty; Zuckerman, Daniel M


    We extend replica-exchange simulation in two ways and apply our approaches to biomolecules. The first generalization permits exchange simulation between models of differing resolution--i.e., between detailed and coarse-grained models. Such "resolution exchange" can be applied to molecular systems or spin systems. The second extension is to "pseudoexchange" simulations, which require little CPU usage for most levels of the exchange ladder and also substantially reduce the need for overlap between levels. Pseudoexchanges can be used in either replica or resolution exchange simulations. We perform efficient, converged simulations of a 50-atom peptide to illustrate the new approaches.

  11. Simulation modeling and arena

    CERN Document Server

    Rossetti, Manuel D


    Emphasizes a hands-on approach to learning statistical analysis and model building through the use of comprehensive examples, problems sets, and software applications With a unique blend of theory and applications, Simulation Modeling and Arena®, Second Edition integrates coverage of statistical analysis and model building to emphasize the importance of both topics in simulation. Featuring introductory coverage on how simulation works and why it matters, the Second Edition expands coverage on static simulation and the applications of spreadsheets to perform simulation. The new edition als

  12. NS simulator for beginners

    CERN Document Server

    Altman, Eitan


    NS-2 is an open-source discrete event network simulator which is widely used by both the research community as well as by the people involved in the standardization protocols of IETF. The goal of this book is twofold: on one hand to learn how to use the NS-2 simulator, and on the other hand, to become acquainted with and to understand the operation of some of the simulated objects using NS-2 simulations. The book is intended to help students, engineers or researchers who need not have much background in programming or who want to learn through simple examples how to analyse some simulated obje

  13. A comparison of the conditional inference survival forest model to random survival forests based on a simulation study as well as on two applications with time-to-event data. (United States)

    Nasejje, Justine B; Mwambi, Henry; Dheda, Keertan; Lesosky, Maia


    Random survival forest (RSF) models have been identified as alternative methods to the Cox proportional hazards model in analysing time-to-event data. These methods, however, have been criticised for the bias that results from favouring covariates with many split-points and hence conditional inference forests for time-to-event data have been suggested. Conditional inference forests (CIF) are known to correct the bias in RSF models by separating the procedure for the best covariate to split on from that of the best split point search for the selected covariate. In this study, we compare the random survival forest model to the conditional inference model (CIF) using twenty-two simulated time-to-event datasets. We also analysed two real time-to-event datasets. The first dataset is based on the survival of children under-five years of age in Uganda and it consists of categorical covariates with most of them having more than two levels (many split-points). The second dataset is based on the survival of patients with extremely drug resistant tuberculosis (XDR TB) which consists of mainly categorical covariates with two levels (few split-points). The study findings indicate that the conditional inference forest model is superior to random survival forest models in analysing time-to-event data that consists of covariates with many split-points based on the values of the bootstrap cross-validated estimates for integrated Brier scores. However, conditional inference forests perform comparably similar to random survival forests models in analysing time-to-event data consisting of covariates with fewer split-points. Although survival forests are promising methods in analysing time-to-event data, it is important to identify the best forest model for analysis based on the nature of covariates of the dataset in question.

  14. Microencapsulation of Lactobacillus plantarum (mtcc 5422) by spray-freeze-drying method and evaluation of survival in simulated gastrointestinal conditions. (United States)

    Dolly, Priyanka; Anishaparvin, A; Joseph, G S; Anandharamakrishnan, C


    Spray-drying (SD) and freeze-drying (FD) are widely used methods for microencapsulation of heat-sensitive materials like probiotics for long-term preservation and transport. Spray-freeze-drying (SFD) is relatively a new technique that involves spraying a solution into a cold medium and removal of solvent (water) by conventional vacuum FD method. In this study, the SFD microencapsulated Lactobacillus plantarum powder (1:1 and 1:1.5 core-to-wall ratios of whey protein) is compared with the microencapsulated powders produced by FD and SD methods. The SFD and FD processed microencapsulated powder show 20% higher cell viability than the SD samples. In simulated gastrointestinal conditions, the SFD and FD cells show up to 4 h better tolerance than SD samples and unencapsulated cells in acidic and pepsin condition. The morphology of SFD samples shows particles almost in spherical shape with numerous fine pores, which in turn results in good rehydration behaviour of the powdered product.

  15. Effect of addition of inulin and fenugreek on the survival of microencapsulated Enterococcus durans 39C in alginate-psyllium polymeric blends in simulated digestive system and yogurt

    Directory of Open Access Journals (Sweden)

    Babak Haghshenas


    Full Text Available The use of biopolymers for probiotic microencapsulation has been investigated in this paper. The objectives are to enhance its survival rate, colonic release, and stability of these probiotic cultures in digestive condition during storage time. Nine types of biopolymers (alginate-psyllium blend with different concentration of prebiotic; (inulin or fenugreek were used as candidate for microencapsulation matrix. One strain of probiotic candidates, namely; Enterococcus durans 39C was used in this study. The microencapsulation of this strain with the respective polymer blend was performed by using a simple extrusion method. All blend of formulations have recorded high encapsulation efficiency at value >98%. The survival rate of viable probiotic cells under simulated digestive conditions was also high with value above 47% as compared to non-microencapsulated cells. These nine gel formulations also displayed the high survival rate of viable probiotic cells during storage time (28 d. Their release occurred after 2 h in colonic condition and sustained until 12th h of incubation period. An increase of prebiotic effect value added was observed in incorporated inulin and fenugreek formulations. In short, this study revealed that a new herbal-based psyllium and fenugreek polymers have suitable potential as a matrix for probiotic microencapsulation.

  16. Parallel Atomistic Simulations

    Energy Technology Data Exchange (ETDEWEB)



    Algorithms developed to enable the use of atomistic molecular simulation methods with parallel computers are reviewed. Methods appropriate for bonded as well as non-bonded (and charged) interactions are included. While strategies for obtaining parallel molecular simulations have been developed for the full variety of atomistic simulation methods, molecular dynamics and Monte Carlo have received the most attention. Three main types of parallel molecular dynamics simulations have been developed, the replicated data decomposition, the spatial decomposition, and the force decomposition. For Monte Carlo simulations, parallel algorithms have been developed which can be divided into two categories, those which require a modified Markov chain and those which do not. Parallel algorithms developed for other simulation methods such as Gibbs ensemble Monte Carlo, grand canonical molecular dynamics, and Monte Carlo methods for protein structure determination are also reviewed and issues such as how to measure parallel efficiency, especially in the case of parallel Monte Carlo algorithms with modified Markov chains are discussed.

  17. Discrete-Event Simulation

    Directory of Open Access Journals (Sweden)

    Prateek Sharma


    Full Text Available Abstract Simulation can be regarded as the emulation of the behavior of a real-world system over an interval of time. The process of simulation relies upon the generation of the history of a system and then analyzing that history to predict the outcome and improve the working of real systems. Simulations can be of various kinds but the topic of interest here is one of the most important kind of simulation which is Discrete-Event Simulation which models the system as a discrete sequence of events in time. So this paper aims at introducing about Discrete-Event Simulation and analyzing how it is beneficial to the real world systems.

  18. Developing Software Simulations

    Directory of Open Access Journals (Sweden)

    Tom Hall


    Full Text Available Programs in education and business often require learners to develop and demonstrate competence in specified areas and then be able to effectively apply this knowledge. One method to aid in developing a skill set in these areas is through the use of software simulations. These simulations can be used for learner demonstrations of competencies in a specified course as well as a review of the basic skills at the beginning of subsequent courses. The first section of this paper discusses ToolBook, the software used to develop our software simulations. The second section discusses the process of developing software simulations. The third part discusses how we have used software simulations to assess student knowledge of research design by providing simulations that allow the student to practice using SPSS and Excel.

  19. Multiscale Simulations Using Particles

    DEFF Research Database (Denmark)

    Walther, Jens Honore

    We are developing particle methods as a general framework for large scale simulations of discrete and continuous systems in science and engineering. The specific application and research areas include: discrete element simulations of granular flow, smoothed particle hydrodynamics and particle...... vortex methods for problems in continuum fluid dynamics, dissipative particle dynamics for flow at the meso scale, and atomistic molecular dynamics simulations of nanofluidic systems. We employ multiscale techniques to breach the atomistic and continuum scales to study fundamental problems in fluid...

  20. Packet Tracer network simulator

    CERN Document Server

    Jesin, A


    A practical, fast-paced guide that gives you all the information you need to successfully create networks and simulate them using Packet Tracer.Packet Tracer Network Simulator is aimed at students, instructors, and network administrators who wish to use this simulator to learn how to perform networking instead of investing in expensive, specialized hardware. This book assumes that you have a good amount of Cisco networking knowledge, and it will focus more on Packet Tracer rather than networking.

  1. Compact simulator technology

    Energy Technology Data Exchange (ETDEWEB)

    Fray, R.; Divakaruni, M. (Electric Power Research Inst., Palo Alto, CA (United States))


    In its work to expand and enhance simulator-based training in the fossil generation industry, EPRI is developing compact simulator technology for training power plant operators. These personal computer-based systems are more flexible and much less expensive than conventional, mainframe-based simulators, and their use can dramatically increase operator effectiveness. The potential benefits for utilities include improved plant performance, availability, life, and environmental compliance and thus significantly lower O and M costs.

  2. Simulation by bondgraphs (United States)

    Thoma, Jean Ulrich

    The fundamental principles and applications of the bond graph method, in which a system is represented on paper by letter elements and their interconnections (bonds), are presented in an introduction for engineering students. Chapters are devoted to simulation and graphical system models; bond graphs as networks for power and signal exchange; the simulation and design of mechanical engineering systems; the simulation of fluid power systems and hydrostatic devices; electrical circuits, drives, and components; practical procedures and problems of bond-graph-based numerical simulation; and applications to thermodynamics, chemistry, and biology. Also included are worked examples of applications to robotics, shocks and collisions, ac circuits, hydraulics, and a hydropneumatic fatigue-testing machine.

  3. Urban Simulation Environment (Preprint)

    National Research Council Canada - National Science Library

    Stoor, Bradley J; Pruett, Stanley H; Duquette, Matthew M; Subr, Robert C; MtCastle, Tim


    .... The simulation environment will include multiple urban databases for visualization, UAV aerodynamics and control models, camera models, articulated human models, and ground vehicle models to serve...

  4. Effect of salt, smoke compound and temperature on the survival of Listeria monocytogenes in salmon during simulated smoking processes (United States)

    In smoked fish processes, smoking is the only step that is capable of inactivating pathogens, such as Listeria monocytogenes, that contaminate the raw fish. The objectives of this study were to examine and develop a model to describe the survival of L. monocytogenes in salmon as affected by salt, s...

  5. Survival and behavior of Chinese mystery snails (Bellamya chinensis in response to simulated water body drawdowns and extended air exposure

    Directory of Open Access Journals (Sweden)

    Kody M. Unstad


    Full Text Available Nonnative invasive mollusks degrade aquatic ecosystems and induce economic losses worldwide. Extended air exposure through water bodydrawdown is one management action used for control. In North America, the Chinese mystery snail (Bellamya chinensis is an invasiveaquatic snail with an expanding range, but eradication methods for this species are not well documented. We assessed the ability ofB. chinensis to survive different durations of air exposure, and observed behavioral responses prior to, during, and following desiccationevents. Individual B. chinensis specimens survived air exposure in a laboratory setting for > 9 weeks, and survivorship was greater amongadults than juveniles. Several B. chinensis specimens responded to desiccation by sealing their opercula and/or burrowing in mud substrate.Our results indicate that drawdowns alone may not be an effective means of eliminating B. chinensis. This study lays the groundwork forfuture management research that may determine the effectiveness of drawdowns when combined with factors such as extreme temperatures,predation, or molluscicides.

  6. Survival and behavior of Chinese mystery snails (Bellamya chinensis) in response to simulated water body drawdowns and extended air exposure (United States)

    Unstad, Kody M.; Uden, Daniel R.; Allen, Craig R.; Chaine, Noelle M.; Haak, Danielle M.; Kill, Robert A.; Pope, Kevin L.; Stephen, Bruce J.; Wong, Alec


    Nonnative invasive mollusks degrade aquatic ecosystems and induce economic losses worldwide. Extended air exposure through water body drawdown is one management action used for control. In North America, the Chinese mystery snail (Bellamya chinensis) is an invasive aquatic snail with an expanding range, but eradication methods for this species are not well documented. We assessed the ability of B. chinensis to survive different durations of air exposure, and observed behavioral responses prior to, during, and following desiccation events. Individual B. chinensis specimens survived air exposure in a laboratory setting for > 9 weeks, and survivorship was greater among adults than juveniles. Several B. chinensis specimens responded to desiccation by sealing their opercula and/or burrowing in mud substrate. Our results indicate that drawdowns alone may not be an effective means of eliminating B. chinensis. This study lays the groundwork for future management research that may determine the effectiveness of drawdowns when combined with factors such as extreme temperatures, predation, or molluscicides.

  7. Calcium alginate-resistant starch mixed gel improved the survival of Bifidobacterium animalis subsp lactis Bb12 and Lactobacillus rhamnosus LBRE-LSAS in yogurt and simulated gastrointestinal conditions


    ZIAR, Hasnia; Gerard, Philippe; Riazi, Ali


    The aim of this study was to investigate the protective effect of microencapsulation in calcium alginate-resistant starch mixed gel of a new human isolated strain of Lactobacillus rhamnosus LBRE-LSAS compared with the probiotic strain of Bifidobacterium animalis subsp. lactis Bb12. Influence of microencapsulation was tested under deleterious digestive environment, when challenged to salivary a-amylase, to simulated gastric fluid and to simulated intestinal fluid. Bacterial survival, post-acid...

  8. Pre-cultivation with Selected Prebiotics Enhances the Survival and the Stress Response of Lactobacillus rhamnosus Strains in Simulated Gastrointestinal Transit (United States)

    Succi, Mariantonietta; Tremonte, Patrizio; Pannella, Gianfranco; Tipaldi, Luca; Cozzolino, Autilia; Romaniello, Rossana; Sorrentino, Elena; Coppola, Raffaele


    In our study, we dwelled upon combinations of lactobacilli/prebiotics, considering four different strains belonging to the Lactobacillus rhamnosus species, including Lactobacillus rhamnosus GG (LGG), and different prebiotics often found in commercial synbiotic products, such as inulin, lactulose and polyols mannitol and sorbitol. In the first step of the research, the survival, the growth kinetic parameters and the protein expression of Lb. rhamnosus strains cultivated in presence of the different prebiotics as a unique carbon source were evaluated. In the second step, the influence of pre-cultivation in medium added of metabolizable prebiotics on the strains survival to simulated gastrointestinal (GI) transit, assayed without prebiotics addition, was estimated. Our results showed that the presence in the medium of certain low fermented prebiotics, specific for each strain, represents a stress factor that significantly affects the growth of Lb. rhamnosus strains, inducing the up-regulation of several proteins. In detail, all added prebiotics used as unique carbon source caused a growth retard compared with glucose, as testified by increased values of the lag phase and decreased values of the μmax. Mannitol evidenced intermediate μmax values between those registered with glucose and those detected with the other assayed prebiotics. Moreover, the cultivation with prebiotics induced the over expression of 7 protein bands. Interestingly, we found a correlation between the up-regulation of two specific stress proteins, called P4 (ATP-binding subunit Clpx) and P7 (GrpE), and the death kinetic parameters (resistance and cells viability) registered during the simulated GI transit of strains pre-cultivated with specific, low fermented prebiotics. Specifically, the highest resistance and gastric-vitality scores were highlighted for the strain AT195 when pre-cultivated in presence of sorbitol. Conversely, the lowest values were found in the case of DSM20021 pre

  9. Simulating Price-Taking (United States)

    Engelhardt, Lucas M.


    In this article, the author presents a price-takers' market simulation geared toward principles-level students. This simulation demonstrates that price-taking behavior is a natural result of the conditions that create perfect competition. In trials, there is a significant degree of price convergence in just three or four rounds. Students find this…

  10. Instructional environments for simulations

    NARCIS (Netherlands)

    van Berkum, Jos J.A.; de Jong, Anthonius J.M.


    The use of computer simulations in education and training can have substantial advantages over other approaches. In comparison with alternatives such as textbooks, lectures, and tutorial courseware, a simulation-based approach offers the opportunity to learn in a relatively realistic problem-solving

  11. Instructional environments for simulations.

    NARCIS (Netherlands)

    van Berkum, J.J.A.|info:eu-repo/dai/nl/146736842; de Jong, T.


    The use of computer simulations in education and training can have substantial advantages over other approaches. In comparison with alternatives such as textbooks, lectures, and tutorial courseware, a simulation-based approach offers the opportunity to learn in a relatively realistic problem-solving

  12. Scientific Modeling and simulations

    CERN Document Server

    Diaz de la Rubia, Tomás


    Showcases the conceptual advantages of modeling which, coupled with the unprecedented computing power through simulations, allow scientists to tackle the formibable problems of our society, such as the search for hydrocarbons, understanding the structure of a virus, or the intersection between simulations and real data in extreme environments

  13. Simulation of quantum computers

    NARCIS (Netherlands)

    De Raedt, H; Michielsen, K; Hams, AH; Miyashita, S; Saito, K; Landau, DP; Lewis, SP; Schuttler, HB


    We describe a simulation approach to study the functioning of Quantum Computer hardware. The latter is modeled by a collection of interacting spin-1/2 objects. The time evolution of this spin system maps one-to-one to a quantum program carried out by the Quantum Computer. Our simulation software

  14. Beamstrahlung simulation and diagnostics

    Energy Technology Data Exchange (ETDEWEB)

    Ziemann, V.


    A simulation code that models the mutual deflection and the emission of beamstrahlung of two ultra-relativistic electron and positron bunches is described. The simulations are used to determine transverse beam sizes from observed beamstrahlung fluxes. 8 refs., 3 figs.

  15. Simulation Activity Diagrams


    Ryan, John; Heavey, Cathal


    This paper presents a technique, Simulation Activity Diagrams (SAD), developed to lessen the modelling burden during the initial requirements gathering phases of a simulation project. The technique also allows the capture and visual communication of detailed information, to manufacturing personnel, which may otherwise be lost in detailed programming code.

  16. Approach to simulation effectiveness

    CSIR Research Space (South Africa)

    Goncalves, DPD


    Full Text Available ? The context and purpose of simulation are important in answering the question. If the simulation is viewed as a system, it follows that it has stakeholders and requirements originating from the creating system. An important result is that measures...

  17. Multicore Education through Simulation (United States)

    Ozturk, O.


    A project-oriented course for advanced undergraduate and graduate students is described for simulating multiple processor cores. Simics, a free simulator for academia, was utilized to enable students to explore computer architecture, operating systems, and hardware/software cosimulation. Motivation for including this course in the curriculum is…

  18. TANGO Array. 2. Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Bauleo, P. E-mail:; Bonifazi, C.; Filevich, A


    The angular and energy resolutions of the TANGO Array were obtained using extensive Monte Carlo simulations performed with a double purpose: (1) to determine the appropriate parameters for the array fitting to the desired range of sensitivity (the knee energy region), and (2) to construct a reliable shower database required for reference in the analysis of experimental data. The AIRES code, with the SIBYLL hadronic collision package, was used to simulate Extended Air Showers produced by primary cosmic rays (assuming protons and iron nuclei), with energies ranging from 10{sup 14} to 10{sup 18} eV. These data were fed into a realistic code which simulates the response of the detectors (water Cherenkov detectors), including the electronics, pickup noise, and the signal attenuation in the connecting cables. The trigger stage was considered in the simulations in order to estimate the trigger efficiency of the array and to verify the accuracy of the reconstruction codes. This paper delineates the simulations performed to obtain the expected behavior of the array, and describes the simulated data. The results of these simulations suggest that we can expect an error in the energy of the primary cosmic-ray of {approx}60% of the estimated value and that the error in the measurement of the direction of arrival can be estimated as {approx}4 deg. . The present simulations also indicate that unambiguous assignments of the primary energy cannot be obtained because of the uncertainty in the nature of the primary cosmic ray.

  19. TANGO Array.. 2. Simulations (United States)

    Bauleo, P.; Bonifazi, C.; Filevich, A.


    The angular and energy resolutions of the TANGO Array were obtained using extensive Monte Carlo simulations performed with a double purpose: (1) to determine the appropriate parameters for the array fitting to the desired range of sensitivity (the knee energy region), and (2) to construct a reliable shower database required for reference in the analysis of experimental data. The AIRES code, with the SIBYLL hadronic collision package, was used to simulate Extended Air Showers produced by primary cosmic rays (assuming protons and iron nuclei), with energies ranging from 10 14 to 10 18 eV. These data were fed into a realistic code which simulates the response of the detectors (water Cherenkov detectors), including the electronics, pickup noise, and the signal attenuation in the connecting cables. The trigger stage was considered in the simulations in order to estimate the trigger efficiency of the array and to verify the accuracy of the reconstruction codes. This paper delineates the simulations performed to obtain the expected behavior of the array, and describes the simulated data. The results of these simulations suggest that we can expect an error in the energy of the primary cosmic-ray of ˜60% of the estimated value and that the error in the measurement of the direction of arrival can be estimated as ˜4°. The present simulations also indicate that unambiguous assignments of the primary energy cannot be obtained because of the uncertainty in the nature of the primary cosmic ray.

  20. Beyond Iconic Simulation (United States)

    Dormans, Joris


    Realism remains a prominent topic in game design and industry research; yet, a strong academic case can be made that games are anything, but realistic. This article frames realism in games in semiotic terms as iconic simulation and argues that games can gain expressiveness when they move beyond the current focus on iconic simulation. In parallel…

  1. Parallel simulation today (United States)

    Nicol, David; Fujimoto, Richard


    This paper surveys topics that presently define the state of the art in parallel simulation. Included in the tutorial are discussions on new protocols, mathematical performance analysis, time parallelism, hardware support for parallel simulation, load balancing algorithms, and dynamic memory management for optimistic synchronization.

  2. A Bakery Simulation (United States)

    McCormick, Kathryn Eaton


    In keeping with current trends in career education in home economics, the food classes at Tuscola High School, Illinois, were involved in a bakery simulation. Objectives, suggestions for developing a simulated bakery, job roles, benefits, and sample forms are presented. (Author/MW)

  3. Electric-car simulation (United States)

    Chapman, C. P.; Slusser, R. A.


    PARAMET, interactive simulation program for parametric studies of electric vehicles, guides user through simulation by menu and series of prompts for input parameters. Program considers aerodynamic drag, rolling resistance, linear and rotational acceleration, and road gradient as forces acting on vehicle.

  4. VCSEL Applications and Simulation (United States)

    Cheung, Samson; Goorjian, Peter; Ning, Cun-Zheng; Li, Jian-Zhong


    This viewgraph presentation gives an overview of Vertical Cavity Surface Emitting Laser (VCSEL) simulation and its applications. Details are given on the optical interconnection in information technology of VCSEL, the formulation of the simulation, its numeric algorithm, and the computational results.

  5. Risk Management and Simulation

    DEFF Research Database (Denmark)

    Skovmand, David


    Review of: Risk Management and Simulation / Aparna Gupta. Boca Raton, FL: CRC Press, 2013, xxix + 491 pp., $99.95(H), ISBN: 978-1-4398-3594-4.......Review of: Risk Management and Simulation / Aparna Gupta. Boca Raton, FL: CRC Press, 2013, xxix + 491 pp., $99.95(H), ISBN: 978-1-4398-3594-4....

  6. Interactive Foresight Simulation

    DEFF Research Database (Denmark)

    Hansen, Mette Sanne; Rasmussen, Lauge Baungaard; Jacobsen, Peter


    The Combined Simulation Approach (CSA) is a way to evaluate risks and address potential unforeseen problems in a more interactive way than what is often observed in practice in companies or sectors. The approach is based on a combination of scenario analysis and discrete-event computer simulation...

  7. Political Simulations Using Excel (United States)

    Jackson, Steven F.


    Simulations have received considerable attention as a tool to promote problem-solving skills, intense involvement, and high-order thinking among students. Whether semester-long exercises or a single-class session, simulations are often used in areas of conflict studies, diplomatic studies, trade disputes, electoral processes, and policy and legal…

  8. Airport Network Flow Simulator (United States)


    The Airport Network Flow Simulator is a FORTRAN IV simulation of the flow of air traffic in the nation's 600 commercial airports. It calculates for any group of selected airports: (a) the landing and take-off (Type A) delays; and (b) the gate departu...

  9. Rainfall simulation in education (United States)

    Peters, Piet; Baartman, Jantiene; Gooren, Harm; Keesstra, Saskia


    Rainfall simulation has become an important method for the assessment of soil erosion and soil hydrological processes. For students, rainfall simulation offers an year-round, attractive and active way of experiencing water erosion, while not being dependent on (outdoors) weather conditions. Moreover, using rainfall simulation devices, they can play around with different conditions, including rainfall duration, intensity, soil type, soil cover, soil and water conservation measures, etc. and evaluate their effect on erosion and sediment transport. Rainfall simulators differ in design and scale. At Wageningen University, both BSc and MSc student of the curriculum 'International Land and Water Management' work with different types of rainfall simulation devices in three courses: - A mini rainfall simulator (0.0625m2) is used in the BSc level course 'Introduction to Land Degradation and Remediation'. Groups of students take the mini rainfall simulator with them to a nearby field location and test it for different soil types, varying from clay to more sandy, slope angles and vegetation or litter cover. The groups decide among themselves which factors they want to test and they compare their results and discuss advantage and disadvantage of the mini-rainfall simulator. - A medium sized rainfall simulator (0.238 m2) is used in the MSc level course 'Sustainable Land and Water Management', which is a field practical in Eastern Spain. In this course, a group of students has to develop their own research project and design their field measurement campaign using the transportable rainfall simulator. - Wageningen University has its own large rainfall simulation laboratory, in which a 15 m2 rainfall simulation facility is available for research. In the BSc level course 'Land and Water Engineering' Student groups will build slopes in the rainfall simulator in specially prepared containers. Aim is to experience the behaviour of different soil types or slope angles when (heavy) rain

  10. A bobsleigh simulator software

    Energy Technology Data Exchange (ETDEWEB)

    Rempfler, Georg S., E-mail: [ETH Zurich, CLA G23.3, IMES—Center of Mechanics (Switzerland); Glocker, Christoph, E-mail: [ETH Zurich, CLA J23.1, IMES—Center of Mechanics (Switzerland)


    This paper presents a model of the artificial ice track in Whistler, Canada that is based on its construction data, and a model of a two-men bobsleigh consisting of nine rigid bodies, having 13 degrees of freedom and incorporating 17 hard frictional contacts. These models are implemented within a simulator that is capable of performing accurate real time simulations of piloted runs on commonly available PC hardware. The simulation is verified against the results of the official two-men race that took place during the Olympic Winter Games in 2010. The simulator has been used by several professional Swiss pilots during their preparation for the 2014 Olympic Winter Games in Sochi, Russia. The simulator is exploited to analyse and judge the range of possible driving lines regarding speed and runtime improvements. It could also serve to consult track designers about safety issues and sleigh constructors about the expected dynamics on a track.

  11. Handbook of simulation optimization

    CERN Document Server

    Fu, Michael C


    The Handbook of Simulation Optimization presents an overview of the state of the art of simulation optimization, providing a survey of the most well-established approaches for optimizing stochastic simulation models and a sampling of recent research advances in theory and methodology. Leading contributors cover such topics as discrete optimization via simulation, ranking and selection, efficient simulation budget allocation, random search methods, response surface methodology, stochastic gradient estimation, stochastic approximation, sample average approximation, stochastic constraints, variance reduction techniques, model-based stochastic search methods and Markov decision processes. This single volume should serve as a reference for those already in the field and as a means for those new to the field for understanding and applying the main approaches. The intended audience includes researchers, practitioners and graduate students in the business/engineering fields of operations research, management science,...

  12. Massively parallel multicanonical simulations (United States)

    Gross, Jonathan; Zierenberg, Johannes; Weigel, Martin; Janke, Wolfhard


    Generalized-ensemble Monte Carlo simulations such as the multicanonical method and similar techniques are among the most efficient approaches for simulations of systems undergoing discontinuous phase transitions or with rugged free-energy landscapes. As Markov chain methods, they are inherently serial computationally. It was demonstrated recently, however, that a combination of independent simulations that communicate weight updates at variable intervals allows for the efficient utilization of parallel computational resources for multicanonical simulations. Implementing this approach for the many-thread architecture provided by current generations of graphics processing units (GPUs), we show how it can be efficiently employed with of the order of 104 parallel walkers and beyond, thus constituting a versatile tool for Monte Carlo simulations in the era of massively parallel computing. We provide the fully documented source code for the approach applied to the paradigmatic example of the two-dimensional Ising model as starting point and reference for practitioners in the field.

  13. Hardware Accelerated Simulated Radiography

    Energy Technology Data Exchange (ETDEWEB)

    Laney, D; Callahan, S; Max, N; Silva, C; Langer, S; Frank, R


    We present the application of hardware accelerated volume rendering algorithms to the simulation of radiographs as an aid to scientists designing experiments, validating simulation codes, and understanding experimental data. The techniques presented take advantage of 32 bit floating point texture capabilities to obtain validated solutions to the radiative transport equation for X-rays. An unsorted hexahedron projection algorithm is presented for curvilinear hexahedra that produces simulated radiographs in the absorption-only regime. A sorted tetrahedral projection algorithm is presented that simulates radiographs of emissive materials. We apply the tetrahedral projection algorithm to the simulation of experimental diagnostics for inertial confinement fusion experiments on a laser at the University of Rochester. We show that the hardware accelerated solution is faster than the current technique used by scientists.

  14. Simulation in Complex Modelling

    DEFF Research Database (Denmark)

    Nicholas, Paul; Ramsgaard Thomsen, Mette; Tamke, Martin


    This paper will discuss the role of simulation in extended architectural design modelling. As a framing paper, the aim is to present and discuss the role of integrated design simulation and feedback between design and simulation in a series of projects under the Complex Modelling framework. Complex...... performance, engage with high degrees of interdependency and allow the emergence of design agency and feedback between the multiple scales of architectural construction. This paper presents examples for integrated design simulation from a series of projects including Lace Wall, A Bridge Too Far and Inflated...... Restraint developed for the research exhibition Complex Modelling, Meldahls Smedie Gallery, Copenhagen in 2016. Where the direct project aims and outcomes have been reported elsewhere, the aim for this paper is to discuss overarching strategies for working with design integrated simulation....

  15. Embedding Quantum Simulator (United States)

    di Candia, Roberto; Mejia, Bernabé; Castillo, Hernan; Simon Pedernales, Julen; Casanova, Jorge; Solano, Enrique


    We introduce the concept of embedding quantum simulator, a paradigm allowing efficient computation of dynamical quantities requiring full quantum tomography in a standard quantum simulator (one-to-one quantum simulator). The concept consists in the suitable encoding of a simulated quantum dynamics in the enlarged Hilbert space of an embedding quantum simulator. In this manner, non-trivial quantities are mapped onto physical observables, overcoming the necessity of full tomography, and reducing drastically the experimental requirements. As examples, we discuss how to evaluate entanglement monotones and time correlation functions, each in a suitable embedding quantum simulator. Finally, we expect that the proposed embedding framework paves the way for a general theory of enhanced one-to-one quantum simulators. This work is supported by Spanish MINECO FIS2012-36673-C03-02; UPV/EHU UFI 11/55; UPV/EHU PhD fellowship; Basque Government IT472-10; SOLID, CCQED, PROMISCE, SCALEQIT EU projects; and Marco Polo PUCP grant.

  16. Simulation and surgical training. (United States)

    Sarker, S K; Patel, B


    The aim of this review was to outline current forms of surgical simulation and methods of assessing technical skills using these forms of simulation. To review this subject, a literature search was done using key words 'assessment', 'simulation', 'surgery', 'technical skills' and 'virtual reality'. Simulation in surgery has several forms, inorganic (synthetic & computer) and organic (animal or cadaver). Surgical simulation is a mode of training which is promising and may be effective. Technical errors in the simulated environment do not have clinical consequences and does not have a morbidity or mortality. We must ensure that the competent skills learnt in the simulation environment are translated to the real environment. This can be achieved if the same assessment tools are used in both environments. Surgical training is entering a new era, with increased scrutiny and an evolving work and training environment. We as surgical teachers must ensure that the surgeons of the future are as competent as or better than their predecessors using these new modes of training which we have access to.

  17. Simulating 'the right stuff' (United States)

    Fischetti, M. A.; Truxal, C.


    The present investigation is mainly concerned with simulators employed in the training of pilots in the Armed Services and other military personnel, taking into account certain problems and approaches for overcoming them. The use of simulators for training programs has a number of advantages compared to training involving a use of the actual equipment. Questions arise, however, regarding the value of such a training. Thus, it has been said that, while simulators gave students practice in manual skill, they could not teach them to handle the stress of being in a real aircraft. It has also been argued that some tasks are not represented accurately enough for proper training. In response to this criticism, the capacity of the simulators has been greatly improved. However, this development leads to problems related to the cost of simulator training. Attention is given to better visuals for flight simulators, the current generation of graphics imagery and expected improvements, possibilities for reducing flight simulator costs, and advances due to progress in microcomputers.

  18. Adiabatic quantum simulators

    Directory of Open Access Journals (Sweden)

    J. D. Biamonte


    Full Text Available In his famous 1981 talk, Feynman proposed that unlike classical computers, which would presumably experience an exponential slowdown when simulating quantum phenomena, a universal quantum simulator would not. An ideal quantum simulator would be controllable, and built using existing technology. In some cases, moving away from gate-model-based implementations of quantum computing may offer a more feasible solution for particular experimental implementations. Here we consider an adiabatic quantum simulator which simulates the ground state properties of sparse Hamiltonians consisting of one- and two-local interaction terms, using sparse Hamiltonians with at most three-local interactions. Properties of such Hamiltonians can be well approximated with Hamiltonians containing only two-local terms. The register holding the simulated ground state is brought adiabatically into interaction with a probe qubit, followed by a single diabatic gate operation on the probe which then undergoes free evolution until measured. This allows one to recover e.g. the ground state energy of the Hamiltonian being simulated. Given a ground state, this scheme can be used to verify the QMA-complete problem LOCAL HAMILTONIAN, and is therefore likely more powerful than classical computing.

  19. Loose Graph Simulations

    DEFF Research Database (Denmark)

    Mansutti, Alessio; Miculan, Marino; Peressotti, Marco


    We introduce loose graph simulations (LGS), a new notion about labelled graphs which subsumes in an intuitive and natural way subgraph isomorphism (SGI), regular language pattern matching (RLPM) and graph simulation (GS). Being a unification of all these notions, LGS allows us to express directly...... also problems which are “mixed” instances of previous ones, and hence which would not fit easily in any of them. After the definition and some examples, we show that the problem of finding loose graph simulations is NP-complete, we provide formal translation of SGI, RLPM, and GS into LGSs, and we give...

  20. Simulation of a microgrid (United States)

    Dulǎu, Lucian Ioan


    This paper describes the simulation of a microgrid system with storage technologies. The microgrid comprises 6 distributed generators (DGs), 3 loads and a 150 kW storage unit. The installed capacity of the generators is 1100 kW, while the total load demand is 900 kW. The simulation is performed by using a SCADA software, considering the power generation costs, the loads demand and the system's power losses. The generators access the system in order of their power generation cost. The simulation is performed for the entire day.

  1. Supply Chain Simulation : A Survey

    NARCIS (Netherlands)

    Kleijnen, J.P.C.


    This paper provides a survey of simulation in supply chain management.It reviews four types of simulation, namely spreadsheet simulation, system dynamics, discreteevent simulation, and business games.Which simulation type should be applied, depends on the type of managerial question to be answered

  2. Enterococcus faecium and Enterococcus durans isolated from cheese: Survival in the presence of medications under simulated gastrointestinal conditions and adhesion properties. (United States)

    Amaral, Daniel M F; Silva, Luana F; Casarotti, Sabrina N; Nascimento, Liane Caroline Sousa; Penna, Ana Lúcia B


    In this study, we evaluated the survival of Enterococcus faecium and Enterococcus durans, isolated from cheese, in the presence of medications and under simulated in vitro gastrointestinal conditions. The presence of genes encoding virulence factors, the susceptibility to antimicrobial agents, and adhesion properties were also assessed. Enterococcus faecium and E. durans both exhibited resistance to most of the tested medications but showed a large sensitivity to analgesics and antihypertensives; they also showed wide susceptibility to antimicrobial agents. Enterococcus durans SJRP29 had greater resistance to the presence of medications in comparison with the probiotic Lactobacillus acidophilus La-5. The strains, except for E. durans SJRP05, did not harbor virulence genes. Enterococcus durans SJRP14, SJRP17, and SJRP26 were sensitive to all tested antimicrobial agents. Enterococcus faecium was more stable during the simulation of gastrointestinal tract and showed greater viability. At the end of the assay, except for E. durans SJRP17, all strains showed high viability (>7 log cfu/mL). Enterococcus durans SJRP29 stood out from the other strains and was selected for further evaluation; it tolerated up to 3.0% NaCl at 30 and 37°C, besides having good adhesion properties (high values of auto-aggregation, co-aggregation, and hydrophobicity). Additionally, the microorganism did not show bile salt hydrolase activity or mucin degradation. These results encourage carrying out additional tests to evaluate the probiotic features by using in vitro dynamic models and in vivo tests before applying these strains to a food system. Copyright © 2017 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  3. Immersive Simulation Laboratory (United States)

    Federal Laboratory Consortium — FUNCTION: Develops and tests novel user interfaces for 3D virtual simulators and first-person shooter games that make user interaction more like natural interaction...

  4. CATCC/AATCC Simulator (United States)

    Federal Laboratory Consortium — The 15G30 CATCC/AATCC simulator provides high fidelity training for Navy Air Traffic Control (ATC) trainees in a realistic shipboard air traffic control environment....

  5. Water Quality Analysis Simulation (United States)

    U.S. Environmental Protection Agency — The Water Quality analysis simulation Program, an enhancement of the original WASP. This model helps users interpret and predict water quality responses to natural...

  6. Cataract Vision Simulator (United States)

    ... and Videos: What Do Cataracts Look Like? Cataract Vision Simulator Leer en Español: Simulador: Catarata Jun. 11, 2014 How do cataracts affect your vision? A cataract is a clouding of the eye's ...

  7. A Simulation of Amblyopia. (United States)

    Rouse, Michael W.; And Others


    A simulation of the decreased visual acuity of individuals with amblyopia is used in one optometry program to help students understand how amblyopia patients see. Students act as patient, then as doctor, proceeding through clinical diagnosis. (MSE)

  8. Water Quality Analysis Simulation (United States)

    The Water Quality analysis simulation Program, an enhancement of the original WASP. This model helps users interpret and predict water quality responses to natural phenomena and man-made pollution for variious pollution management decisions.

  9. On hadronic shower simulation

    CERN Document Server

    Wellisch, J P


    The exploitation of hadronic final states played a key role in the successes of all recent HEP collider experiments, and the ability to use the hadronic final state will continue to be one of the decisive issues during the LHC era. Monte Carlo techniques to make efficient use of hadronic final states have been developed for many years, and have a technological culmination in object oriented tool-kits for hadronic shower simulation that now are becoming available. In the present paper we give a brief overview on the physics modeling underlying hadronic shower simulation, and report on advanced techniques used and developed for simulation of hadronic showers in HEP experiments. We will discuss the three basic types of modelling - data driven, parametrisation driven, and theory driven modelling - and demonstrate ways to combine them in a flexible manner for concrete applications. We will confront the different types of modelling with the stringent requirements on hadronic shower simulation posed by LHC, and inve...

  10. Fidelity in clinical simulation

    DEFF Research Database (Denmark)

    Jensen, Sanne; Nøhr, Christian; Rasmussen, Stine Loft


    Clinical simulation may be used to identify user needs for context sensitive functionalities in e-Health. The objective with this paper is to describe how user requirements and use cases in a large EHR-platform procurement may be validated by clinical simulation using a very low-fidelity prototype...... without any existing test data. Instead of using test scenarios and use cases, the healthcare professionals who are participating in the clinical simulation are generating both scenario and patient data themselves. We found that this approach allows for an imaginative discussion, not restricted by known...... functionalities and limitations, of the ideal EHR-platform. Subsequently, we discuss benefits and challenges of using an extremely low fidelity environment and discuss the degree of fidelity necessary for conducting clinical simulation....

  11. Electromechanical Drivetrain Simulation

    DEFF Research Database (Denmark)

    Gallego-Calderon, Juan; Branner, Kim; Natarajan, Anand


    The work presented in this paper is another step from the DTU Wind Energy efforts to advance understanding of the electromechanical drive-train loads and its interaction with the rest of the components in the wind turbine. The main objective of the PhD is to investigate the modelling and simulation...... of a wind turbine’s drivetrain using an integrated simulation approach where different simulation tools are interconnected. Matlab and HAWC2 are used for this purpose. A contribution is expected to be in the study of the interaction between the mechanical loads in the gearbox due to gear mesh and bearing...... flexibilities, the generator dynamics and the grid, along with the structural loads in the wind turbine. In this paper, two simulation approaches are presented and conclusions are made according to their advantages and disadvantages. The drive-train is described by means of a torsional model composed...

  12. Adaptive core simulation (United States)

    Abdel-Khalik, Hany Samy

    The work presented in this thesis is a continuation of a master's thesis research project conducted by the author to gain insight into the applicability of inverse methods to developing adaptive simulation capabilities for core physics problems. Use of adaptive simulation is intended to improve the fidelity and robustness of important core attributes predictions such as core power distribution, thermal margins and core reactivity. Adaptive simulation utilizes a selected set of past and current reactor measurements of reactor observables, i.e. in-core instrumentations readings, to adapt the simulation in a meaningful way. A meaningful adaption will result in high fidelity and robust adapted core simulators models. To perform adaption, we propose an inverse theory approach in which the multitudes of input data to core simulators, i.e. reactor physics and thermal-hydraulic data, are to be adjusted to improve agreement with measured observables while keeping core simulators models unadapted. At a first glance, devising such adaption for typical core simulators models would render the approach impractical. This follows, since core simulators are based on very demanding computational models, i.e. based on complex physics models with millions of input data and output observables. This would spawn not only several prohibitive challenges but also numerous disparaging concerns. The challenges include the computational burdens of the sensitivity-type calculations required to construct Jacobian operators for the core simulators models. Also, the computational burdens of the uncertainty-type calculations required to estimate the uncertainty information of core simulators input data presents a demanding challenge. The concerns however are mainly related to the reliability of the adjusted input data. We demonstrate that the power of our proposed approach is mainly driven by taking advantage of this unfavorable situation. Our contribution begins with the realization that to obtain

  13. Xyce parallel electronic simulator.

    Energy Technology Data Exchange (ETDEWEB)

    Keiter, Eric R; Mei, Ting; Russo, Thomas V.; Rankin, Eric Lamont; Schiek, Richard Louis; Thornquist, Heidi K.; Fixel, Deborah A.; Coffey, Todd S; Pawlowski, Roger P; Santarelli, Keith R.


    This document is a reference guide to the Xyce Parallel Electronic Simulator, and is a companion document to the Xyce Users Guide. The focus of this document is (to the extent possible) exhaustively list device parameters, solver options, parser options, and other usage details of Xyce. This document is not intended to be a tutorial. Users who are new to circuit simulation are better served by the Xyce Users Guide.

  14. BISEN: Biochemical Simulation Environment


    Vanlier, J.; Wu, F.; Qi, F; Vinnakota, K. C.; Han, Y; Dash, R. K.; Yang, F; Beard, D. A.


    Summary: The Biochemical Simulation Environment (BISEN) is a suite of tools for generating equations and associated computer programs for simulating biochemical systems in the MATLAB® computing environment. This is the first package that can generate appropriate systems of differential equations for user-specified multi-compartment systems of enzymes and transporters accounting for detailed biochemical thermodynamics, rapid equilibria of multiple biochemical species and dynamic proton and met...

  15. Transient FDTD simulation validation


    Jauregui Tellería, Ricardo; Riu Costa, Pere Joan; Silva Martínez, Fernando


    In computational electromagnetic simulations, most validation methods have been developed until now to be used in the frequency domain. However, the EMC analysis of the systems in the frequency domain many times is not enough to evaluate the immunity of current communication devices. Based on several studies, in this paper we propose an alternative method of validation of the transients in time domain allowing a rapid and objective quantification of the simulations results.

  16. Simulation versus Optimisation

    DEFF Research Database (Denmark)

    Lund, Henrik; Arler, Finn; Østergaard, Poul Alberg


    investment optimisation or optimal solutions approach. On the other hand the analytical simulation or alternatives assessment approach. Awareness of the dissimilar theoretical assumption behind the models clarifies differences between the models, explains dissimilarities in results, and provides...... a theoretical and methodological foundation for understanding and interpreting results from the two archetypes. Keywords: energy system analysis; investment optimisation models; simulations models; modelling theory;renewable energy...

  17. Validation of simulation models

    DEFF Research Database (Denmark)

    Rehman, Muniza; Pedersen, Stig Andur


    In philosophy of science, the interest for computational models and simulations has increased heavily during the past decades. Different positions regarding the validity of models have emerged but the views have not succeeded in capturing the diversity of validation methods. The wide variety...... of models has been somewhat narrow-minded reducing the notion of validation to establishment of truth. This article puts forward the diversity in applications of simulation models that demands a corresponding diversity in the notion of validation....

  18. Simulated Solute Tempering. (United States)

    Denschlag, Robert; Lingenheil, Martin; Tavan, Paul; Mathias, Gerald


    For the enhanced conformational sampling in molecular dynamics (MD) simulations, we present "simulated solute tempering" (SST) which is an easy to implement variant of simulated tempering. SST extends conventional simulated tempering (CST) by key concepts of "replica exchange with solute tempering" (REST, Liu et al. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 13749). We have applied SST, CST, and REST to molecular dynamics (MD) simulations of an alanine octapeptide in explicit water. The weight parameters required for CST and SST are determined by two different formulas whose performance is compared. For SST only one of them yields a uniform sampling of the temperature space. Compared to CST and REST, SST provides the highest exchange probabilities between neighboring rungs in the temperature ladder. Concomitantly, SST leads to the fastest diffusion of the simulation system through the temperature space, in particular, if the "even-odd" exchange scheme is employed in SST. As a result, SST exhibits the highest sampling speed of the investigated tempering methods.

  19. CMS Fast Simulation

    CERN Document Server

    Rahmat, Rahmat


    A framework for Fast Simulation of particle interactions in the CMS detector has been developed and implemented in the overall simulation, reconstruction and analysis framework of CMS. It produces data samples in the same format as the one used by the Geant4-based (henceforth Full) Simulation and Reconstruction chain; the output of the Fast Simulation of CMS can therefore be used in the analysis in the same way as other ones. The Fast Simulation has been used already for several physics analyses in CMS, in particular those requiring a generation of many samples to scan an extended parameter space of the physics model (e.g. SUSY). Other use cases dealt with by the Fast Simulation of CMS are those involving the generation of large cross-section backgrounds, and samples of manageable size can only be produced by events skimming based on the final reconstructed objects, or those for which in general a large computation time is foreseen. An important issue, related with the high luminosity achieved by the LHC acce...

  20. Simulation - modeling - experiment; Simulation - modelisation - experience

    Energy Technology Data Exchange (ETDEWEB)



    After two workshops held in 2001 on the same topics, and in order to make a status of the advances in the domain of simulation and measurements, the main goals proposed for this workshop are: the presentation of the state-of-the-art of tools, methods and experiments in the domains of interest of the Gedepeon research group, the exchange of information about the possibilities of use of computer codes and facilities, about the understanding of physical and chemical phenomena, and about development and experiment needs. This document gathers 18 presentations (slides) among the 19 given at this workshop and dealing with: the deterministic and stochastic codes in reactor physics (Rimpault G.); MURE: an evolution code coupled with MCNP (Meplan O.); neutronic calculation of future reactors at EdF (Lecarpentier D.); advance status of the MCNP/TRIO-U neutronic/thermal-hydraulics coupling (Nuttin A.); the FLICA4/TRIPOLI4 thermal-hydraulics/neutronics coupling (Aniel S.); methods of disturbances and sensitivity analysis of nuclear data in reactor physics, application to VENUS-2 experimental reactor (Bidaud A.); modeling for the reliability improvement of an ADS accelerator (Biarotte J.L.); residual gas compensation of the space charge of intense beams (Ben Ismail A.); experimental determination and numerical modeling of phase equilibrium diagrams of interest in nuclear applications (Gachon J.C.); modeling of irradiation effects (Barbu A.); elastic limit and irradiation damage in Fe-Cr alloys: simulation and experiment (Pontikis V.); experimental measurements of spallation residues, comparison with Monte-Carlo simulation codes (Fallot M.); the spallation target-reactor coupling (Rimpault G.); tools and data (Grouiller J.P.); models in high energy transport codes: status and perspective (Leray S.); other ways of investigation for spallation (Audoin L.); neutrons and light particles production at intermediate energies (20-200 MeV) with iron, lead and uranium targets (Le Colley F

  1. Eternity Variables to Simulate Specifications

    NARCIS (Netherlands)

    Hesselink, WH; Boiten, EA; Moller, B


    Simulation of specifications is introduced as a unification and generalization of refinement mappings, history variables, forward simulations, prophecy variables, and backward simulations. Eternity variables are introduced as a more powerful alternative for prophecy variables and backward

  2. General regression neural network and Monte Carlo simulation model for survival and growth of Salmonella on raw chicken skin as a function of serotype, temperature and time for use in risk assessment (United States)

    A general regression neural network and Monte Carlo simulation model for predicting survival and growth of Salmonella on raw chicken skin as a function of serotype (Typhimurium, Kentucky, Hadar), temperature (5 to 50C) and time (0 to 8 h) was developed. Poultry isolates of Salmonella with natural r...

  3. Interactive Dynamic-System Simulation

    CERN Document Server

    Korn, Granino A


    Showing you how to use personal computers for modeling and simulation, Interactive Dynamic-System Simulation, Second Edition provides a practical tutorial on interactive dynamic-system modeling and simulation. It discusses how to effectively simulate dynamical systems, such as aerospace vehicles, power plants, chemical processes, control systems, and physiological systems. Written by a pioneer in simulation, the book introduces dynamic-system models and explains how software for solving differential equations works. After demonstrating real simulation programs with simple examples, the author

  4. Converting DYNAMO simulations to Powersim Studio simulations

    Energy Technology Data Exchange (ETDEWEB)

    Walker, La Tonya Nicole; Malczynski, Leonard A.


    DYNAMO is a computer program for building and running 'continuous' simulation models. It was developed by the Industrial Dynamics Group at the Massachusetts Institute of Technology for simulating dynamic feedback models of business, economic, and social systems. The history of the system dynamics method since 1957 includes many classic models built in DYANMO. It was not until the late 1980s that software was built to take advantage of the rise of personal computers and graphical user interfaces that DYNAMO was supplanted. There is much learning and insight to be gained from examining the DYANMO models and their accompanying research papers. We believe that it is a worthwhile exercise to convert DYNAMO models to more recent software packages. We have made an attempt to make it easier to turn these models into a more current system dynamics software language, Powersim © Studio produced by Powersim AS2 of Bergen, Norway. This guide shows how to convert DYNAMO syntax into Studio syntax.

  5. Multi-purpose process simulators

    Directory of Open Access Journals (Sweden)

    Ommund Øgård


    Full Text Available The first part of this paper describes a multi-purpose dynamic simulator for the Heidrun oil production plant. The simulator integrates a commercial dynamic simulation model with the actual process control system to enable dynamic simulation, control system verification and operator training within the same framework and based on the same models and configuration data. The control system configuration can be imported directly into the simulator. This simplifies simulator maintenance and ensure consistency between the simulator and the real plant. The entire system runs on standard Unix work stations. The simulator has so far been used for initial operator training, control system verification and controller tuning.

  6. EMU Suit Performance Simulation (United States)

    Cowley, Matthew S.; Benson, Elizabeth; Harvill, Lauren; Rajulu, Sudhakar


    Introduction: Designing a planetary suit is very complex and often requires difficult trade-offs between performance, cost, mass, and system complexity. To verify that new suit designs meet requirements, full prototypes must be built and tested with human subjects. However, numerous design iterations will occur before the hardware meets those requirements. Traditional draw-prototype-test paradigms for research and development are prohibitively expensive with today's shrinking Government budgets. Personnel at NASA are developing modern simulation techniques that focus on a human-centric design paradigm. These new techniques make use of virtual prototype simulations and fully adjustable physical prototypes of suit hardware. This is extremely advantageous and enables comprehensive design down-selections to be made early in the design process. Objectives: The primary objective was to test modern simulation techniques for evaluating the human performance component of two EMU suit concepts, pivoted and planar style hard upper torso (HUT). Methods: This project simulated variations in EVA suit shoulder joint design and subject anthropometry and then measured the differences in shoulder mobility caused by the modifications. These estimations were compared to human-in-the-loop test data gathered during past suited testing using four subjects (two large males, two small females). Results: Results demonstrated that EVA suit modeling and simulation are feasible design tools for evaluating and optimizing suit design based on simulated performance. The suit simulation model was found to be advantageous in its ability to visually represent complex motions and volumetric reach zones in three dimensions, giving designers a faster and deeper comprehension of suit component performance vs. human performance. Suit models were able to discern differing movement capabilities between EMU HUT configurations, generic suit fit concerns, and specific suit fit concerns for crewmembers based

  7. Survival of Listeria monocytogenes in a Simulated Dynamic Gastrointestinal Model during Storage of Inoculated Bologna and Salami Slices in Vacuum Packages

    National Research Council Canada - National Science Library

    Barmpalia-Davis, Ioanna M; Geornaras, Ifigenia; Kendall, Patricia A; Sofos, John N


    Listeria monocytogenes counts were determined during storage (82 days, 4°C) in vacuum packages of inoculated bologna and salami slices and after exposure to a simulated dynamic model of the stomach and small intestine...

  8. Computer Modeling and Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Pronskikh, V. S. [Fermilab


    Verification and validation of computer codes and models used in simulation are two aspects of the scientific practice of high importance and have recently been discussed by philosophers of science. While verification is predominantly associated with the correctness of the way a model is represented by a computer code or algorithm, validation more often refers to model’s relation to the real world and its intended use. It has been argued that because complex simulations are generally not transparent to a practitioner, the Duhem problem can arise for verification and validation due to their entanglement; such an entanglement makes it impossible to distinguish whether a coding error or model’s general inadequacy to its target should be blamed in the case of the model failure. I argue that in order to disentangle verification and validation, a clear distinction between computer modeling (construction of mathematical computer models of elementary processes) and simulation (construction of models of composite objects and processes by means of numerical experimenting with them) needs to be made. Holding on to that distinction, I propose to relate verification (based on theoretical strategies such as inferences) to modeling and validation, which shares the common epistemology with experimentation, to simulation. To explain reasons of their intermittent entanglement I propose a weberian ideal-typical model of modeling and simulation as roles in practice. I suggest an approach to alleviate the Duhem problem for verification and validation generally applicable in practice and based on differences in epistemic strategies and scopes

  9. Multilevel turbulence simulations

    Energy Technology Data Exchange (ETDEWEB)

    Tziperman, E. [Princeton Univ., NJ (United States)


    The authors propose a novel method for the simulation of turbulent flows, that is motivated by and based on the Multigrid (MG) formalism. The method, called Multilevel Turbulence Simulations (MTS), is potentially more efficient and more accurate than LES. In many physical problems one is interested in the effects of the small scales on the larger ones, or in a typical realization of the flow, and not in the detailed time history of each small scale feature. MTS takes advantage of the fact that the detailed simulation of small scales is not needed at all times, in order to make the calculation significantly more efficient, while accurately accounting for the effects of the small scales on the larger scale of interest. In MTS, models of several resolutions are used to represent the turbulent flow. The model equations in each coarse level incorporate a closure term roughly corresponding to the tau correction in the MG formalism that accounts for the effects of the unresolvable scales on that grid. The finer resolution grids are used only a small portion of the simulation time in order to evaluate the closure terms for the coarser grids, while the coarse resolution grids are then used to accurately and efficiently calculate the evolution of the larger scales. The methods efficiency relative to direct simulations is of the order of the ratio of required integration time to the smallest eddies turnover time, potentially resulting in orders of magnitude improvement for a large class of turbulence problems.

  10. Simulation of Mission Phases (United States)

    Carlstrom, Nicholas Mercury


    This position with the Simulation and Graphics Branch (ER7) at Johnson Space Center (JSC) provided an introduction to vehicle hardware, mission planning, and simulation design. ER7 supports engineering analysis and flight crew training by providing high-fidelity, real-time graphical simulations in the Systems Engineering Simulator (SES) lab. The primary project assigned by NASA mentor and SES lab manager, Meghan Daley, was to develop a graphical simulation of the rendezvous, proximity operations, and docking (RPOD) phases of flight. The simulation is to include a generic crew/cargo transportation vehicle and a target object in low-Earth orbit (LEO). Various capsule, winged, and lifting body vehicles as well as historical RPOD methods were evaluated during the project analysis phase. JSC core mission to support the International Space Station (ISS), Commercial Crew Program (CCP), and Human Space Flight (HSF) influenced the project specifications. The simulation is characterized as a 30 meter +V Bar and/or -R Bar approach to the target object's docking station. The ISS was selected as the target object and the international Low Impact Docking System (iLIDS) was selected as the docking mechanism. The location of the target object's docking station corresponds with the RPOD methods identified. The simulation design focuses on Guidance, Navigation, and Control (GNC) system architecture models with station keeping and telemetry data processing capabilities. The optical and inertial sensors, reaction control system thrusters, and the docking mechanism selected were based on CCP vehicle manufacturer's current and proposed technologies. A significant amount of independent study and tutorial completion was required for this project. Multiple primary source materials were accessed using the NASA Technical Report Server (NTRS) and reference textbooks were borrowed from the JSC Main Library and International Space Station Library. The Trick Simulation Environment and User

  11. Interface Simulation Distances

    Directory of Open Access Journals (Sweden)

    Pavol Černý


    Full Text Available The classical (boolean notion of refinement for behavioral interfaces of system components is the alternating refinement preorder. In this paper, we define a distance for interfaces, called interface simulation distance. It makes the alternating refinement preorder quantitative by, intuitively, tolerating errors (while counting them in the alternating simulation game. We show that the interface simulation distance satisfies the triangle inequality, that the distance between two interfaces does not increase under parallel composition with a third interface, and that the distance between two interfaces can be bounded from above and below by distances between abstractions of the two interfaces. We illustrate the framework, and the properties of the distances under composition of interfaces, with two case studies.

  12. Innovative simulation systems

    CERN Document Server

    Jędrasiak, Karol


    This monograph provides comprehensive guidelines on the current and future trends of innovative simulation systems. In particular, their important components, such as augmented reality and unmanned vehicles are presented. The book consists of three parts. Each part presents good practices, new methods, concepts of systems and new algorithms. Presented challenges and solutions are the results of research and conducted by the contributing authors. The book describes and evaluates the current state of knowledge in the field of innovative simulation systems. Throughout the chapters there are presented current issues and concepts of systems, technology, equipment, tools, research challenges and current, past and future applications of simulation systems. The book is addressed to a wide audience: academic staff, representatives of research institutions, employees of companies and government agencies as well as students and graduates of technical universities in the country and abroad. The book can be a valuable sou...

  13. Liquid filtration simulation

    Energy Technology Data Exchange (ETDEWEB)

    Corey, I.; Bergman, W.


    We have a developed a computer code that simulates 3-D filtration of suspended particles in fluids in realistic filter structures. This code, being the most advanced filtration simulation package developed to date, provides LLNL and DOE with new capabilities to address problems in cleaning liquid wastes, medical fluid cleaning, and recycling liquids. The code is an integrated system of commercially available and LLNL-developed software; the most critical are the computational fluid dynamics (CFD) solver and the particle transport program. For the CFD solver, we used a commercial package based on Navier-Stokes equations and a LLNL-developed package based on Boltzman-lattice gas equations. For the particle transport program, we developed a cod based on the 3-D Langevin equation of motion and the DLVO theory of electrical interactions. A number of additional supporting packages were purchased or developed to integrate the simulation tasks and to provide visualization output.


    Directory of Open Access Journals (Sweden)

    Yu. Taranenko


    Full Text Available The article deals with the theoretical basis of the simulation. The study shows the simulation of logistic processes in industrial countries is an integral part of many economic projects aimed at the creation or improvement of logistics systems. The paper was used model Beer Game for management of logistics processes in the enterprise. The simulation model implements in AnyLogic package. AnyLogic product allows us to consider the logistics processes as an integrated system, which allows reaching better solutions. Logistics process management involves pooling the sales market, production and distribution to ensure the temporal level of customer service at the lowest cost overall. This made it possible to conduct experiments and to determine the optimal size of the warehouse at the lowest cost.

  15. Immune system simulation online

    DEFF Research Database (Denmark)

    Rapin, Nicolas; Lund, Ole; Castiglione, Filippo


    MOTIVATION: The recognition of antigenic peptides is a major event of an immune response. In current mesoscopic-scale simulators of the immune system, this crucial step has been modeled in a very approximated way. RESULTS: We have equipped an agent-based model of the immune system with immuno......-informatics methods to allow the simulation of the cardinal events of the antigenic recognition, going from single peptides to whole proteomes. The recognition process accounts for B cell-epitopes prediction through Parker-scale affinity estimation, class I and II HLA peptide prediction and binding through position...... simulation. AVAILABILITY: CONTACT:

  16. BISEN: Biochemical Simulation Environment. (United States)

    Vanlier, J; Wu, F; Qi, F; Vinnakota, K C; Han, Y; Dash, R K; Yang, F; Beard, D A


    The Biochemical Simulation Environment (BISEN) is a suite of tools for generating equations and associated computer programs for simulating biochemical systems in the MATLAB computing environment. This is the first package that can generate appropriate systems of differential equations for user-specified multi-compartment systems of enzymes and transporters accounting for detailed biochemical thermodynamics, rapid equilibria of multiple biochemical species and dynamic proton and metal ion buffering. The software and a user manual (including several tutorial examples) are available at

  17. In-Situ Simulation

    DEFF Research Database (Denmark)

    Bjerregaard, Anders Thais; Slot, Susanne; Paltved, Charlotte


    for the in situ simulation program. Three scenarios were written and were double-checked by two medical experts. One researcher observed the training to score events and fill out the Team Emergency Assessment Measure (TEAM), a validated team observational tool set for measuring teamwork skills during medical...... emergencies. It contains 12 questions, which are rated using a five-point scale, and covers four categories; leadership, teamwork and task management, and an overall score on team performance. Results: 16 simulations were conducted with 16 different teams of 10 doctors and 32 nurses. First, this study took...

  18. Water Energy Simulation Toolset

    Energy Technology Data Exchange (ETDEWEB)


    The Water-Energy Simulation Toolset (WEST) is an interactive simulation model that helps visualize impacts of different stakeholders on water quantity and quality of a watershed. The case study is applied for the Snake River Basin with the fictional name Cutthroat River Basin. There are four groups of stakeholders of interest: hydropower, agriculture, flood control, and environmental protection. Currently, the quality component depicts nitrogen-nitrate contaminant. Users can easily interact with the model by changing certain inputs (climate change, fertilizer inputs, etc.) to observe the change over the entire system. Users can also change certain parameters to test their management policy.

  19. Project Schedule Simulation

    DEFF Research Database (Denmark)

    Mizouni, Rabeb; Lazarova-Molnar, Sanja


    overrun both their budget and time. To improve the quality of initial project plans, we show in this paper the importance of (1) reflecting features’ priorities/risk in task schedules and (2) considering uncertainties related to human factors in plan schedules. To make simulation tasks reflect features....... By comparing EPS to classical schedules, EPS simulation provides more accurate results with regards to project goals. These instructions give you guidelines for preparing papers for Journal of Software (JSW). Use this document as a template if you are using Microsoft Word 6.0 or later. Otherwise, use...

  20. Skin simulators for dermatological procedures


    Wang, Xiaojie; Albahrani, Yasser; Pan, Michael; Levitt, Jacob


    Background: A variety of skin simulators are available on which to practice procedures; however, choice of a suboptimal substitute compromises realism and productive practice. Objective: Skin simulators for basic dermatological procedures are reviewed. Methods: The authors’ anecdotal experience with various skin simulators for different procedures is shared. Results: The following simulators are suggested:  an unripe banana ...

  1. Simulating neural systems with Xyce.

    Energy Technology Data Exchange (ETDEWEB)

    Schiek, Richard Louis; Thornquist, Heidi K.; Mei, Ting; Warrender, Christina E.; Aimone, James Bradley; Teeter, Corinne; Duda, Alex M.


    Sandias parallel circuit simulator, Xyce, can address large scale neuron simulations in a new way extending the range within which one can perform high-fidelity, multi-compartment neuron simulations. This report documents the implementation of neuron devices in Xyce, their use in simulation and analysis of neuron systems.

  2. Computer Simulation in Tomorrow's Schools. (United States)

    Foster, David


    Suggests use of simulation as an educational strategy has promise for the school of the future; discusses specific advantages of simulations over alternative educational methods, role of microcomputers in educational simulation, and past obstacles and future promise of microcomputer simulations; and presents a literature review on effectiveness of…

  3. Simulation in International Relations Education. (United States)

    Starkey, Brigid A.; Blake, Elizabeth L.


    Discusses the educational implications of simulations in international relations. Highlights include the development of international relations simulations; the role of technology; the International Communication and Negotiation Simulations (ICONS) project at the University of Maryland; evolving information technology; and simulating real-world…

  4. The JWS online simulation database. (United States)

    Peters, Martin; Eicher, Johann J; van Niekerk, David D; Waltemath, Dagmar; Snoep, Jacky L


    JWS Online is a web-based platform for construction, simulation and exchange of models in standard formats. We have extended the platform with a database for curated simulation experiments that can be accessed directly via a URL, allowing one-click reproduction of published results. Users can modify the simulation experiments and export them in standard formats. The Simulation database thus lowers the bar on exploring computational models, helps users create valid simulation descriptions and improves the reproducibility of published simulation experiments. The Simulation Database is available on line at . .

  5. Sex and proximity to reproductive maturity influence the survival, final maturation, and blood physiology of Pacific salmon when exposed to high temperature during a simulated migration. (United States)

    Jeffries, Ken M; Hinch, Scott G; Martins, Eduardo G; Clark, Timothy D; Lotto, Andrew G; Patterson, David A; Cooke, Steven J; Farrell, Anthony P; Miller, Kristina M


    Some Pacific salmon populations have been experiencing increasingly warmer river temperatures during their once-in-a-lifetime spawning migration, which has been associated with en route and prespawn mortality. The mechanisms underlying such temperature-mediated mortality are poorly understood. Wild adult pink (Oncorhynchus gorbuscha) and sockeye (Oncorhynchus nerka) salmon were used in this study. The objectives were to investigate the effects of elevated water temperature on mortality, final maturation, and blood properties under controlled conditions that simulated a "cool" (13°C) and "warm" (19°C) freshwater spawning migration. After 10 d at 13°C, observed mortality was 50%-80% in all groups, which suggested that there was likely some mortality associated with handling and confinement. Observed mortality after 10 d at 19°C was higher, reaching ≥98% in male pink salmon and female pink and sockeye salmon. Thus, male sockeye salmon were the most thermally tolerant (54% observed mortality). Model selection supported the temperature- and sex-specific mortality patterns. The pink salmon were closer to reproductive maturation and farther along the senescence trajectory than sockeye salmon, which likely influenced their survival and physiological responses throughout the experiment. Females of both species held at 19°C had reduced plasma sex steroids compared with those held at 13°C, and female pink salmon were less likely to become fully mature at 19° than at 13°C. Male and female sockeye salmon held at 19°C had higher plasma chloride and osmolality than those held at 13°C, indicative of a thermally related stress response. These findings suggest that sex differences and proximity to reproductive maturity must be considered when predicting thermal tolerance and the magnitude of en route and prespawn mortality for Pacific salmon.

  6. Simulating solar MHD

    Directory of Open Access Journals (Sweden)

    M. Schüssler

    Full Text Available Two aspects of solar MHD are discussed in relation to the work of the MHD simulation group at KIS. Photospheric magneto-convection, the nonlinear interaction of magnetic field and convection in a strongly stratified, radiating fluid, is a key process of general astrophysical relevance. Comprehensive numerical simulations including radiative transfer have significantly improved our understanding of the processes and have become an important tool for the interpretation of observational data. Examples of field intensification in the solar photosphere ('convective collapse' are shown. The second line of research is concerned with the dynamics of flux tubes in the convection zone, which has far-reaching implications for our understanding of the solar dynamo. Simulations indicate that the field strength in the region where the flux is stored before erupting to form sunspot groups is of the order of 105 G, an order of magnitude larger than previous estimates based on equipartition with the kinetic energy of convective flows.

    Key words. Solar physics · astrophysics and astronomy (photosphere and chromosphere; stellar interiors and dynamo theory; numerical simulation studies.

  7. Simulating Energy Transitions

    NARCIS (Netherlands)

    Chappin, E.J.L.


    Have you ever wanted to know whether a CO2 tax outperforms the EU emissions trading scheme? Or how long it really takes markets to change and to let consumers choose differently? In this book, Emile Chappin explores simulation models to provide us with answers before policy interventions are

  8. Simulation Insights Using "R" (United States)

    Kostadinov, Boyan


    This article attempts to introduce the reader to computational thinking and solving problems involving randomness. The main technique being employed is the Monte Carlo method, using the freely available software "R for Statistical Computing." The author illustrates the computer simulation approach by focusing on several problems of…

  9. PSH Transient Simulation Modeling

    Energy Technology Data Exchange (ETDEWEB)

    Muljadi, Eduard [National Renewable Energy Laboratory (NREL), Golden, CO (United States)


    PSH Transient Simulation Modeling presentation from the WPTO FY14 - FY16 Peer Review. Transient effects are an important consideration when designing a PSH system, yet numerical techniques for hydraulic transient analysis still need improvements for adjustable-speed (AS) reversible pump-turbine applications.

  10. Molecular simulation of NH

    NARCIS (Netherlands)

    Kabra, Abhishek; Becker, T.M.; Wang, M.; Infante Ferreira, C.A.; Vlugt, T.J.H.


    Force Field based Monte Carlo (MC) simulations are conducted to predict the performance of an absorption heat pump cycle involving NH3/ionic liquid (IL) (refrigerant/absorbent) as working pair. To investigate the thermodynamic performance of the cycle, various properties such as the enthalpy of

  11. Multimodal perception and simulation

    NARCIS (Netherlands)

    Werkhoven, P.J.; Erp, J.B.F. van


    This chapter discusses mechanisms of multimodal perception in the context of multimodal simulators and virtual worlds. We review some notable findings from psychophysical experiments with a focus on what we call touch-inclusive multimodal perception—that is, the sensory integration of the tactile

  12. Simulation of geothermal subsidence

    Energy Technology Data Exchange (ETDEWEB)

    Miller, I.; Dershowitz, W.; Jones, K.; Myer, L.; Roman, K.; Schauer, M.


    The results of an assessment of existing mathematical models for subsidence simulation and prediction are summarized. The following subjects are discussed: the prediction process, physical processes of geothermal subsidence, computational models for reservoir flow, computational models for deformation, proficiency assessment, and real and idealized case studies. (MHR)

  13. Simulating the Physical World (United States)

    Berendsen, Herman J. C.


    The simulation of physical systems requires a simplified, hierarchical approach which models each level from the atomistic to the macroscopic scale. From quantum mechanics to fluid dynamics, this book systematically treats the broad scope of computer modeling and simulations, describing the fundamental theory behind each level of approximation. Berendsen evaluates each stage in relation to its applications giving the reader insight into the possibilities and limitations of the models. Practical guidance for applications and sample programs in Python are provided. With a strong emphasis on molecular models in chemistry and biochemistry, this book will be suitable for advanced undergraduate and graduate courses on molecular modeling and simulation within physics, biophysics, physical chemistry and materials science. It will also be a useful reference to all those working in the field. Additional resources for this title including solutions for instructors and programs are available online at The first book to cover the wide range of modeling and simulations, from atomistic to the macroscopic scale, in a systematic fashion Providing a wealth of background material, it does not assume advanced knowledge and is eminently suitable for course use Contains practical examples and sample programs in Python

  14. Juno Mission Simulation (United States)

    Lee, Meemong; Weidner, Richard J.


    The Juno spacecraft is planned to launch in August of 2012 and would arrive at Jupiter four years later. The spacecraft would spend more than one year orbiting the planet and investigating the existence of an ice-rock core; determining the amount of global water and ammonia present in the atmosphere, studying convection and deep- wind profiles in the atmosphere; investigating the origin of the Jovian magnetic field, and exploring the polar magnetosphere. Juno mission management is responsible for mission and navigation design, mission operation planning, and ground-data-system development. In order to ensure successful mission management from initial checkout to final de-orbit, it is critical to share a common vision of the entire mission operation phases with the rest of the project teams. Two major challenges are 1) how to develop a shared vision that can be appreciated by all of the project teams of diverse disciplines and expertise, and 2) how to continuously evolve a shared vision as the project lifecycle progresses from formulation phase to operation phase. The Juno mission simulation team addresses these challenges by developing agile and progressive mission models, operation simulations, and real-time visualization products. This paper presents mission simulation visualization network (MSVN) technology that has enabled a comprehensive mission simulation suite (MSVN-Juno) for the Juno project.

  15. Enabling immersive simulation.

    Energy Technology Data Exchange (ETDEWEB)

    McCoy, Josh (University of California Santa Cruz, Santa Cruz, CA); Mateas, Michael (University of California Santa Cruz, Santa Cruz, CA); Hart, Derek H.; Whetzel, Jonathan; Basilico, Justin Derrick; Glickman, Matthew R.; Abbott, Robert G.


    The object of the 'Enabling Immersive Simulation for Complex Systems Analysis and Training' LDRD has been to research, design, and engineer a capability to develop simulations which (1) provide a rich, immersive interface for participation by real humans (exploiting existing high-performance game-engine technology wherever possible), and (2) can leverage Sandia's substantial investment in high-fidelity physical and cognitive models implemented in the Umbra simulation framework. We report here on these efforts. First, we describe the integration of Sandia's Umbra modular simulation framework with the open-source Delta3D game engine. Next, we report on Umbra's integration with Sandia's Cognitive Foundry, specifically to provide for learning behaviors for 'virtual teammates' directly from observed human behavior. Finally, we describe the integration of Delta3D with the ABL behavior engine, and report on research into establishing the theoretical framework that will be required to make use of tools like ABL to scale up to increasingly rich and realistic virtual characters.

  16. Smoothed Particle Hydrodynamic Simulator

    Energy Technology Data Exchange (ETDEWEB)


    This code is a highly modular framework for developing smoothed particle hydrodynamic (SPH) simulations running on parallel platforms. The compartmentalization of the code allows for rapid development of new SPH applications and modifications of existing algorithms. The compartmentalization also allows changes in one part of the code used by many applications to instantly be made available to all applications.

  17. Reasoning as simulation. (United States)

    Cassimatis, Nicholas L; Murugesan, Arthi; Bignoli, Perrin G


    The theory that human cognition proceeds through mental simulations, if true, would provide a parsimonious explanation of how the mechanisms of reasoning and problem solving integrate with and develop from mechanisms underlying forms of cognition that occur earlier in evolution and development. However, questions remain about whether simulation mechanisms are powerful enough to exhibit human-level reasoning and inference. In order to investigate this issue, we show that it is possible to characterize some of the most powerful modern artificial intelligence algorithms for logical and probabilistic inference as methods of simulating alternate states of the world. We show that a set of specific human perceptual mechanisms, even if not implemented using mechanisms described in artificial intelligence, can nevertheless perform the same operations as those algorithms. Although this result does not demonstrate that simulation theory is true, it does show that whatever mechanisms underlie perception have at least as much power to explain non-perceptual human reasoning and problem solving as some of the most powerful known algorithms.

  18. [Ethics and medical simulation]. (United States)

    Beloucif, Sadek; Mignon, Alexandre


    Simulation in health care helps to raise health professionals' awareness of medical ethics and to understand the mechanisms involved in a difficult situation. They can thereby adopt a suitable form of behaviour and communication. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

  19. The LHCb Grid Simulation

    CERN Multimedia

    Baranov, Alexander


    The LHCb Grid access if based on the LHCbDirac system. It provides access to data and computational resources to researchers with different geographical locations. The Grid has a hierarchical topology with multiple sites distributed over the world. The sites differ from each other by their number of CPUs, amount of disk storage and connection bandwidth. These parameters are essential for the Grid work. Moreover, job scheduling and data distribution strategy have a great impact on the grid performance. However, it is hard to choose an appropriate algorithm and strategies as they need a lot of time to be tested on the real grid. In this study, we describe the LHCb Grid simulator. The simulator reproduces the LHCb Grid structure with its sites and their number of CPUs, amount of disk storage and bandwidth connection. We demonstrate how well the simulator reproduces the grid work, show its advantages and limitations. We show how well the simulator reproduces job scheduling and network anomalies, consider methods ...

  20. A Learning Community Simulation

    NARCIS (Netherlands)

    Koné, Malik; Berlanga, Adriana; Sloep, Peter; Koper, Rob


    Koné, M., Berlanga, A. J., Sloep, P. B., & Koper, R. (2007). A Learning Community Simulation. In P. Kommers & P. Isaias (Eds.), Proceedings of the IADIS International Conference on Web Based Communities 2007 (pp. 331-335). February, 18-20, 2007, Salamanca, Spain: IADIS Press.

  1. Projective simulation with generalization. (United States)

    Melnikov, Alexey A; Makmal, Adi; Dunjko, Vedran; Briegel, Hans J


    The ability to generalize is an important feature of any intelligent agent. Not only because it may allow the agent to cope with large amounts of data, but also because in some environments, an agent with no generalization capabilities cannot learn. In this work we outline several criteria for generalization, and present a dynamic and autonomous machinery that enables projective simulation agents to meaningfully generalize. Projective simulation, a novel, physical approach to artificial intelligence, was recently shown to perform well in standard reinforcement learning problems, with applications in advanced robotics as well as quantum experiments. Both the basic projective simulation model and the presented generalization machinery are based on very simple principles. This allows us to provide a full analytical analysis of the agent's performance and to illustrate the benefit the agent gains by generalizing. Specifically, we show that already in basic (but extreme) environments, learning without generalization may be impossible, and demonstrate how the presented generalization machinery enables the projective simulation agent to learn.

  2. Automated Simulation Model Generation

    NARCIS (Netherlands)

    Huang, Y.


    One of today's challenges in the field of modeling and simulation is to model increasingly larger and more complex systems. Complex models take long to develop and incur high costs. With the advances in data collection technologies and more popular use of computer-aided systems, more data has become

  3. WFIRST: Grism Simulations (United States)

    Colbert, James; Casertano, Stephano; Kirkpatrick, J. Davy; Rhoads, James; Ryan, Russell; Wang, Yun; Baronchelli, Ivano; Brammer, Gabriel; Dixon, Van; Henry, Alaina; Kruk, Jeffrey; Ravindranath, Swara; Sosey, Megan; Teplitz, Harry


    The WFIRST galaxy redshift survey probes the nature of dark energy through the 3D clustering of galaxies. Realistic grism simulations are important for assessing its performance and modeling the systematic uncertainties. Our latest WFIRST grism simulation work consists of two components. The first component is the creation of slitless grism images with appropriate detector and spectral parameters, such as pixel scale, responsivity, detector position-dependent distortions, traces, offsets, and wavelength dispersions. The second component is the generation of the input lists that are to be fed into the simulation software. For these input lists we have developed three different methods: 1) Direct transfer of an already observed WFC3 grism field, 2) Non-realistic tests of parameter space, appropriate for examining the effects of altering a basic input parameter, like wavelength resolution, 3) Generation of a random, realistic sky field based on measured H-alpha luminosity functions, with observed distributions of equivalent width, size, J-H color, and major/minor axis ratios taken from HST WFC3 grism data (WISP Survey, PI: Malkan). We apply different parameter distributions for the emission-line and the non-emitting field galaxies and we also include star distributions based on galactic latitude, achieving a source density and object overlap consistent with the true sky. We discuss the use of these simulations for analysis and validation.

  4. Active Target Simulation (United States)

    Smith, Nathan; Draznik, Peter; Frank, Nathan


    We have simulated an existing experimental design to determine the resolution improvement upon energy measurements of neutron unbound nuclei. A number of experiments of this type have been performed at the National Superconducting Cyclotron Laboratory (NSCL), located at Michigan State University. An excited nucleus is typically produced with a radioactive beam interacting with a passive Beryllium target. Many different nuclei are produced in experiment, each of which immediately decays into a charged particle and neutron. The charged particles are detected and the neutrons interact in scintillation detectors such as the Modular Neutron Array (MoNA) and Large Multi-Institutional Scintillation Array (LISA). In our simulation, we have constructed an active target that provides additional information such that the point of nuclear interaction within the target may be determined. This information improves the resolution in decay energy measurements of neutron unbound isotopes. This presentation will cover some aspects of the simulation process, as well as showing some of the results that demonstrate the simulated improvement over a passive target.

  5. Numerical Propulsion System Simulation (United States)

    Naiman, Cynthia


    The NASA Glenn Research Center, in partnership with the aerospace industry, other government agencies, and academia, is leading the effort to develop an advanced multidisciplinary analysis environment for aerospace propulsion systems called the Numerical Propulsion System Simulation (NPSS). NPSS is a framework for performing analysis of complex systems. The initial development of NPSS focused on the analysis and design of airbreathing aircraft engines, but the resulting NPSS framework may be applied to any system, for example: aerospace, rockets, hypersonics, power and propulsion, fuel cells, ground based power, and even human system modeling. NPSS provides increased flexibility for the user, which reduces the total development time and cost. It is currently being extended to support the NASA Aeronautics Research Mission Directorate Fundamental Aeronautics Program and the Advanced Virtual Engine Test Cell (AVETeC). NPSS focuses on the integration of multiple disciplines such as aerodynamics, structure, and heat transfer with numerical zooming on component codes. Zooming is the coupling of analyses at various levels of detail. NPSS development includes capabilities to facilitate collaborative engineering. The NPSS will provide improved tools to develop custom components and to use capability for zooming to higher fidelity codes, coupling to multidiscipline codes, transmitting secure data, and distributing simulations across different platforms. These powerful capabilities extend NPSS from a zero-dimensional simulation tool to a multi-fidelity, multidiscipline system-level simulation tool for the full development life cycle.

  6. Attachment and colonization by Escherichia coli O157:H7, Listeria monocytogenes, Salmonella enterica subsp. enterica serovar Typhimurium, and Staphylococcus aureus on stone fruit surfaces and Survival through a simulated commercial export chain. (United States)

    Collignon, Stacey; Korsten, Lise


    The ability of the foodborne pathogens Escherichia coli O157:H7, Listeria monocytogenes, Salmonella enterica subsp. enterica serovar Typhimurium, and Staphylococcus aureus to attach, colonize, and survive on stone fruit surfaces was investigated. Fifty microliters of bacterial suspension was spot inoculated onto the sterile intact fructoplane of whole peaches and plums. Minimum time required for initial adhesion and attachment was recorded for different surface contact times. Surface colonization patterns of the four pathogens and survival under simulated commercial export conditions also were evaluated. L. monocytogenes and Salmonella Typhimurium attached immediately to stone fruit surfaces. E. coli O157:H7 and S. aureus were visibly attached after 30 s and 1 h, respectively, of direct exposure. Holding freshly harvested stone fruit at 0.5 degrees C to simulate cold storage conditions significantly lowered the titer of E. coli O157:H7 on plums and the titers of L. monocytogenes and Salmonella Typhimurium on stone fruit. E. coli O157:H7 and L. monocytogenes at a low inoculum level and S. aureus and Salmonella Typhimurium at high and low levels did not survive the simulated export chain conditions at titers that exceeded the minimum infectious dose. However, E. coli O157:H7 and L. monocytogenes were able to survive on stone fruit surfaces when inoculated at an artificially high level. In this case, the final titer at the end of the supply chain was higher than the infectious dose. In this laboratory experiment, E. coli O157:H7, L. monocytogenes, Salmonella Typhimurium, and S. aureus at potential natural contamination levels were unable to survive simulated export conditions.

  7. Simulations of Solar Jets (United States)

    Kohler, Susanna


    Formation of a coronal jet from twisted field lines that have reconnected with the ambient field. The colors show the radial velocity of the plasma. [Adapted from Szente et al. 2017]How do jets emitted from the Suns surface contribute to its corona and to the solar wind? In a recent study, a team of scientists performed complex three-dimensional simulations of coronal jets to answer these questions.Small ExplosionsCoronal jets are relatively small eruptions from the Suns surface, with heights of roughly 100 to 10,000 km, speeds of 10 to 1,000 km/s, and lifetimes of a few minutes to around ten hours. These jets are constantly present theyre emitted even from the quiet Sun, when activity is otherwise low and weve observed them with a fleet of Sun-watching space telescopes spanning the visible, extreme ultraviolet (EUV), and X-ray wavelength bands.A comparison of simulated observations based on the authors model (left panels) to actual EUV and X-ray observations of jets (right panels). [Szente et al. 2017]Due to their ubiquity, we speculate that these jets might contribute to heating the global solar corona (which is significantly hotter than the surface below it, a curiosity known as the coronal heating problem). We can also wonder what role these jets might play in driving the overall solar wind.Launching a JetLed by Judit Szente (University of Michigan), a team of scientists has explored the impact of coronal jets on the global corona and solar wind with a series of numerical simulations. Szente and collaborators used three-dimensional, magnetohydrodynamic simulations that provide realistic treatment of the solar atmosphere, the solar wind acceleration, and the complexities of heat transfer throughout the corona.In the authors simulations, a jet is initiated as a magnetic dipole rotates at the solar surface, winding up field lines. Magnetic reconnection between the twisted lines and the background field then launches the jet from the dense and hot solar

  8. Simulating the WFXT sky. (United States)

    Tozzi, P.; Santos, J.; Yu, H.; Bignamini, A.; Rosati, P.; Borgani, S.; Campana, S.; Conconi, P.; Gilli, R.; Paolillo, M.; Ptak, A.; WFXT Team

    We investigate the scientific impact of the Wide Field X-ray Telescope mission. We present simulated images and spectra of X-ray sources as observed from the three surveys planned for the nominal 5-year WFXT lifetime. The goal of these simulations is to provide WFXT images of the extragalactic sky in different energy bands based on accurate description of AGN populations, normal and star forming galaxies, groups and clusters of galaxies. The images are realized using a detailed PSF model, instrumental and physical backgrounds/foregrounds, accurate model of the effective area and the related vignetting effect. The simulated images can be used to evaluate the flux limits for detection of point and extended sources, the effect of source confusion at very faint fluxes, and in general the efficiency of detection algorithms. We also simulate the spectra of the detected sources, in order to address specific science topics which are unique to WFXT. Among them, we focus on the characterization of the Intra Cluster Medium (ICM) of high-z clusters, and in particular on the measurement of the redshift from the ICM spectrum in order to build a cosmological sample of galaxy clusters. The end-to-end simulation procedure presented here, is a valuable tool in optimizing the mission design, characterizing the WFXT discovery space and verifying the connection between mission requirements and scientific goals. Thanks to this effort, we can conclude on firm basis that an X-ray mission optimized for surveys like WFXT is necessary to bring X-ray astronomy at the level of the optical, IR, submm and radio wavebands as foreseen in the coming decade.

  9. Ken Jones [and] What Are We Talking About? [and] Simulations and Communication Skills in Secondary Schools [and] Simulations: Reading for Action [and] Who's Who, Who Sits Where [and] Simulations as Examinations [and] What Happens When Students Design and Run Their Own Simulations? [and] The Survival of the Blackest [and] Playing It for Real [and] Interactive Events: National Differences in Participation and Categorization [and] Beginnings and Other Starting Points [and] Three Categories of Ethics [and] Ken Jones's Books and Resources. (United States)

    van Ments, Morry; Brooks, Greg; Shirts, Garry; Jones, Ken


    Includes testimonials to, and previously published articles by, Ken Jones on categories in simulation; simulations in secondary schools, reading instruction, and English-as-a-Second-Language; simulations as assessment tools; aspects of design; differences in race, gender, and perceived ability and performance; influence of national culture;…

  10. Simulant Development for LAWPS Testing

    Energy Technology Data Exchange (ETDEWEB)

    Russell, Renee L. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Schonewill, Philip P. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Burns, Carolyn A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)


    This report describes simulant development work that was conducted to support the technology maturation of the LAWPS facility. Desired simulant physical properties (density, viscosity, solids concentration, solid particle size), sodium concentrations, and general anion identifications were provided by WRPS. The simulant recipes, particularly a “nominal” 5.6M Na simulant, are intended to be tested at several scales, ranging from bench-scale (500 mL) to full-scale. Each simulant formulation was selected to be chemically representative of the waste streams anticipated to be fed to the LAWPS system, and used the current version of the LAWPS waste specification as a formulation basis. After simulant development iterations, four simulants of varying sodium concentration (5.6M, 6.0M, 4.0M, and 8.0M) were prepared and characterized. The formulation basis, development testing, and final simulant recipes and characterization data for these four simulants are presented in this report.

  11. Serious Simulations (for fun)

    DEFF Research Database (Denmark)

    Andersen, Christian Ulrik


    ’Serious Simulations (for fun)’ deals with a dramatic change in the area of computer games. Computer games have throughout the past decades given us the opportunity to experience, tell stories and play in virtual, computer generated worlds. Today, however, the narratives of the computer games......, their laws of physics and their rule structure not only belong to the game world. Incessantly and innovatively, they reach far beyond the game universe and into reality. The computer game today is the place where we not only escape reality, but also relate to reality – similar to the role of the movie...... in the 20th century. They have become an important part of marketing, teaching, political activism, communication and information to the public. It is the language of the future, the language for and about the reality we are living in. The game simulations are still compelling and entertaining...

  12. Black Hole Simulation (United States)


    This graphic shows the computer simulation of a black hole from start to finish. Plasma is falling slowly toward the black hole in a (at the upper left). The plasma has a magnetic field, shown by the white lines. It picks up speed as it falls toward the hole in b (at the upper right), c (lower left) and d (lower right). However, the rotating black hole twists up space itself (and the magnetic field lines) and ejects electromagnetic power along the north and south poles above the black hole. The red and white color shows the immense electromagnetic power output, which eventually will pick up particles and form squirting jets. This simulation was conducted using supercomputers at Japan's National Institute for Fusion Science.

  13. Dissipative universal Lindbladian simulation (United States)

    Zanardi, Paolo; Marshall, Jeffrey; Campos Venuti, Lorenzo


    It is by now well understood that quantum dissipative processes can be harnessed and turned into a resource for quantum-information processing tasks. In this paper we demonstrate yet another way in which this is true by providing a dissipation-assisted protocol for the simulation of general Markovian dynamics. More precisely, we show how a suitable coherent coupling of a quantum system to a set of Markovian dissipating qubits allows one to enact an effective Liouvillian generator of any Lindbladian form. This effective dynamical generator arises from high-order virtual-dissipative processes and governs the system dynamics exactly in the limit of infinitely fast dissipation. Applications to the simulation of collective decoherence are discussed as an illustration.

  14. Interactive CFD simulations


    Duque Lombana, Juan Fernando


    This project is about the development of an implementable Interactive Computer Fluid Dynamics methodology -- The range of this work begins with an overview of the current status of computational fluid dynamics simulation software and methodologies, continues with an introduction to what interactive and interactivity mean, develops an all original interactive CFD methodology to follow for the solution of fluid scenarios and finally, the description of the implementation of an interactive solve...

  15. Radiation in Particle Simulations

    Energy Technology Data Exchange (ETDEWEB)

    More, R; Graziani, F; Glosli, J; Surh, M


    Hot dense radiative (HDR) plasmas common to Inertial Confinement Fusion (ICF) and stellar interiors have high temperature (a few hundred eV to tens of keV), high density (tens to hundreds of g/cc) and high pressure (hundreds of megabars to thousands of gigabars). Typically, such plasmas undergo collisional, radiative, atomic and possibly thermonuclear processes. In order to describe HDR plasmas, computational physicists in ICF and astrophysics use atomic-scale microphysical models implemented in various simulation codes. Experimental validation of the models used to describe HDR plasmas are difficult to perform. Direct Numerical Simulation (DNS) of the many-body interactions of plasmas is a promising approach to model validation but, previous work either relies on the collisionless approximation or ignores radiation. We present four methods that attempt a new numerical simulation technique to address a currently unsolved problem: the extension of molecular dynamics to collisional plasmas including emission and absorption of radiation. The first method applies the Lienard-Weichert solution of Maxwell's equations for a classical particle whose motion is assumed to be known. The second method expands the electromagnetic field in normal modes (planewaves in a box with periodic boundary-conditions) and solves the equation for wave amplitudes coupled to the particle motion. The third method is a hybrid molecular dynamics/Monte Carlo (MD/MC) method which calculates radiation emitted or absorbed by electron-ion pairs during close collisions. The fourth method is a generalization of the third method to include small clusters of particles emitting radiation during close encounters: one electron simultaneously hitting two ions, two electrons simultaneously hitting one ion, etc. This approach is inspired by the virial expansion method of equilibrium statistical mechanics. Using a combination of these methods we believe it is possible to do atomic-scale particle

  16. Edge Simulation Laboratory

    Energy Technology Data Exchange (ETDEWEB)

    Krasheninnikov, Sergei I. [Univ. of California, San Diego, CA (United States); Angus, Justin [Univ. of California, San Diego, CA (United States); Lee, Wonjae [Univ. of California, San Diego, CA (United States)


    The goal of the Edge Simulation Laboratory (ESL) multi-institutional project is to advance scientific understanding of the edge plasma region of magnetic fusion devices via a coordinated effort utilizing modern computing resources, advanced algorithms, and ongoing theoretical development. The UCSD team was involved in the development of the COGENT code for kinetic studies across a magnetic separatrix. This work included a kinetic treatment of electrons and multiple ion species (impurities) and accurate collision operators.

  17. Software Architecture Simulation


    Mårtensson, Frans; Jönsson, Per


    A software architecture is one of the first steps towards a software system. A software architecture can be designed in different ways. During the design phase, it is important to select the most suitable design of the architecture, in order to create a good foundation for the system. The selection process is performed by evaluating architecture alternatives against each other. We investigate the use of continuous simulation of a software architecture as a support tool for architecture evalua...

  18. Bridge Crossing Simulator (United States)


    support the durability testing of Military Bridging and Gap Crossing Equipment. 15. SUBJECT TERMS Bridge Crossing Simulator Trilateral Design... Trilateral Design and Test Code for Military Bridging and Gap Crossing Equipment (TDTC) 1* is derived based on the number of samples the test bridge...Automotive and Armaments Command TARDEC U.S. Army Tank-Automotive Research, Development and Engineering Center TDTC Trilateral Design and Test Code

  19. Simulation of Bremsstrahlung production

    Energy Technology Data Exchange (ETDEWEB)

    Patau, J.P.; Malbert, M.; Terrissol, M. (Centre de Physique Atomique, Toulouse (France))


    Electron slowing down and related phenomena are often greatly affected by bremsstrahlung production. Each creation of photon is individually simulated on the basis of a cross-section pack advised by Koch and Motz with corrections in the high energy frequency limit region. An accurate and fast sampling method is described. Its applicability covers a range between 50 keV and 80 MeV for target atoms whose atomic number is from 5 up to 90.

  20. Wake modeling and simulation

    DEFF Research Database (Denmark)

    Larsen, Gunner Chr.; Madsen Aagaard, Helge; Larsen, Torben J.

    We present a consistent, physically based theory for the wake meandering phenomenon, which we consider of crucial importance for the overall description of wind turbine loadings in wind farms. In its present version the model is confined to single wake situations. The model philosophy does, howev...... methodology has been implemented in the aeroelastic code HAWC2, and example simulations of wake situations, from the small Tjæreborg wind farm, have been performed showing satisfactory agreement between predictions and measurements...

  1. Exploration Supply Chain Simulation (United States)


    The Exploration Supply Chain Simulation project was chartered by the NASA Exploration Systems Mission Directorate to develop a software tool, with proper data, to quantitatively analyze supply chains for future program planning. This tool is a discrete-event simulation that uses the basic supply chain concepts of planning, sourcing, making, delivering, and returning. This supply chain perspective is combined with other discrete or continuous simulation factors. Discrete resource events (such as launch or delivery reviews) are represented as organizational functional units. Continuous resources (such as civil service or contractor program functions) are defined as enabling functional units. Concepts of fixed and variable costs are included in the model to allow the discrete events to interact with cost calculations. The definition file is intrinsic to the model, but a blank start can be initiated at any time. The current definition file is an Orion Ares I crew launch vehicle. Parameters stretch from Kennedy Space Center across and into other program entities (Michaud Assembly Facility, Aliant Techsystems, Stennis Space Center, Johnson Space Center, etc.) though these will only gain detail as the file continues to evolve. The Orion Ares I file definition in the tool continues to evolve, and analysis from this tool is expected in 2008. This is the first application of such business-driven modeling to a NASA/government-- aerospace contractor endeavor.

  2. Simulating "Mars on Earth" (United States)

    Clancey, William J.; Clancy, Daniel (Technical Monitor)


    By now, everyone who's heard of the Haughton-Mars Project knows that we travel to Devon Island to learn how people will live and work on Mars. But how do we learn about Mars operations from what happens in the Arctic? We must document our experience--traverses, life in the hab, instrument deployment, communications, and so on. Then we must analyze and formally model what happens. In short, while most scientists are studying the crater, other scientists must be studying the expedition itself. That's what I have done in the past four field seasons. I study field science, both as it naturally occurs at Haughton (unconstrained by a "Mars Sam") and as a constrained experiment using the Flashline Mars Arctic Research Station. During the second week of July 2001, I lived and worked in the hab as part of the Phase 2 crew of six. Besides participating in all activities, I took many photographs and time lapse video. The result of my work will be a computer simulation of how we lived and worked in the hab. It won't be a model of particular people or even my own phase per se, but a pastiche that demonstrates (a proof of concept) that we have appropriate tools for simulating the layout of the hab and daily routines followed by the group and individual scientists. Activities-how people spend their time-are the focus of my observations for building such a simulation model.

  3. The Indra Simulation Database (United States)

    Falck, Bridget; Budavari, T.; Cole, S.; Crankshaw, D.; Dobos, L.; Lemson, G.; Neyrinck, M.; Szalay, A.; Wang, J.


    We present the Indra suite of cosmological N-body simulations and the design of its companion database. Indra consists of 512 different instances of a 1 Gpc/h-sided box, each with 100 million dark matter particles and the same input cosmology, enabling a characterization of very large-scale modes of the matter power spectrum with galaxy-scale mass resolution and an excellent handle on cosmic variance. Each simulation outputs 64 snapshots, giving over 100 TB of data for the full set of simulations, all of which will be loaded into a SQL database. We discuss the database design for the particle data, consisting of the positions and velocities of each particle; the FOF halos, with links to the particle data so that halo properties can be calculated within the database; and the density field on a power-of-two grid, which can be easily linked to each particle's Peano-Hilbert index. Initial performance tests and example queries will be given. The authors are grateful for support from the Gordon and Betty Moore and the W.M. Keck Foundations.

  4. Fast "coalescent" simulation

    Directory of Open Access Journals (Sweden)

    Wall Jeff D


    Full Text Available Abstract Background The amount of genome-wide molecular data is increasing rapidly, as is interest in developing methods appropriate for such data. There is a consequent increasing need for methods that are able to efficiently simulate such data. In this paper we implement the sequentially Markovian coalescent algorithm described by McVean and Cardin and present a further modification to that algorithm which slightly improves the closeness of the approximation to the full coalescent model. The algorithm ignores a class of recombination events known to affect the behavior of the genealogy of the sample, but which do not appear to affect the behavior of generated samples to any substantial degree. Results We show that our software is able to simulate large chromosomal regions, such as those appropriate in a consideration of genome-wide data, in a way that is several orders of magnitude faster than existing coalescent algorithms. Conclusion This algorithm provides a useful resource for those needing to simulate large quantities of data for chromosomal-length regions using an approach that is much more efficient than traditional coalescent models.

  5. Training by simulation

    Energy Technology Data Exchange (ETDEWEB)

    Angelini, E.


    Effective training by simulation is a matter of 1. accurate definition of the training need, 2. selecting the right hardware/software package to do the job cost effectively, 3. careful, methodical building of the training program and 4. an appropriate setting, such as a well-equipped training center. Several points seem clear: 1. ''Computer shock'' or computer phobia -- that is, fear of the simulator, can be a factor with some of the older operators. But it quickly disappears once they're into the program, and learn the versatility and the exciting dynamics of simulators. 2. Operator training is becoming more sophisticated throughout the HPI. Among other things, operators should get out into the plant to learn more about how their actions in the control room impact the plant. Operators are becoming more ''big picture'' oriented. 3. When inexperienced training instructors are used, they should attend a good ''train the trainer'' course emphasizing platform skills and instructional technology. 4. Operators need as much ''hands on'' experience with the plant's actual operating equipment as possible. The cognitive ''linkage'' between that equipment and what they see on the CRT is vitally important.

  6. Simulation of semiconductor devices

    CERN Document Server

    Oriato, D


    cathode, made using an AIGaAs heterostructure step. Simulations show the importance of the insertion of a thin highly-doped layer between the transit region and the electron launcher in order to improve device operation. Chapter 5 is an introduction to Ill-nitrides, in particular GaN and its alloy ln-GaN. We outline the discrepancy in the elastic and piezoelectric parameters found in the literature. Strain, dislocations and piezoelectricity are presented as the main features of a InGaN/GaN system. In chapter 6 an extensive simulation of the dependence of the optical band gap of a single InGaN quantum well on the piezoelectric and spontaneous polarization is reported. Quantum Confined Stark Effect and screening mechanisms are found to play a major role. The simulation of a novel InGaN/GaN double quantum well LED is presented. A wide well is used to capture electrons that tunnels in a narrow well where they recombine with holes. Resonant asymmetric tunneling of electron and holes is used to increase the efficie...

  7. Simulation and CRM. (United States)

    Ostergaard, Doris; Dieckmann, Peter; Lippert, Anne


    Patients are harmed as a result of incidents. Both poor interdisciplinary communication and teamwork are contributing factors to such events. The principles of crisis resource management are meant to help prevent and manage difficulties and reflect both, the social-team-oriented and cognitive-individual-oriented aspects of human factors. This article explores the importance of human factors training for safe care of patients and the role of simulation. Based on the available literature, the need to integrate this type of training to increase awareness of the importance of human factors and to change attitudes appears obvious. A combination of different training methods appears to be useful. Simulation-based training appears to be favourable, although the number of studies demonstrating the impact of training is limited. It is important to develop training programmes for individual teams, based on the knowledge of challenges and deficiencies, and to monitor behavioural change. Several methods, including patient safety data, interviews, observational studies and simulations, can be used to specify learning objectives. The training should be established for the real team(s). Furthermore, leaders need to implement training in the organisation and establish databases to monitor the impact on patient outcome. Copyright © 2011 Elsevier Ltd. All rights reserved.

  8. Simulation-based design for infrastructure system simulation

    NARCIS (Netherlands)

    Fumarola, M.; Huang, Y.; Tekinay, C.; Seck, M.D.


    Simulation models are often used to analyze the behavior and performance of infrastructure systems. The use of simulation models in multi-actor design processes is restricted to the analysis phase after conceptual designs have been completed. To use simulation models throughout the design process,

  9. Simulation Framework for Teaching in Modeling and Simulation Areas (United States)

    De Giusti, Marisa Raquel; Lira, Ariel Jorge; Villarreal, Gonzalo Lujan


    Simulation is the process of executing a model that describes a system with enough detail; this model has its entities, an internal state, some input and output variables and a list of processes bound to these variables. Teaching a simulation language such as general purpose simulation system (GPSS) is always a challenge, because of the way it…

  10. Molecular Simulations in Astrobiology (United States)

    Pohorille, Andrew; Wilson, Michael A.; Schweighofer, Karl; Chipot, Christophe; New, Michael H.; Vincenzi, Donald L. (Technical Monitor)


    One of the main goals of astrobiology is to understand the origin of cellular life. In the absence of any record of the earliest ancestors of contemporary cells, protocells, the most direct way to test our understanding of their characteristics is to construct laboratory models of protocells. Such efforts, currently underway in the NASA Astrobiology Program, are accompanied by computational studies aimed at explaining self-organization of simple molecules into ordered structures and developing designs of molecules that are capable of performing protocellular functions. Many of these functions, such as importing nutrients, capturing and storing energy, and responding to changes in the environment, are carried out by proteins bound to membranes. We use computer simulations to address the following, questions about these proteins: (1) How do small proteins (peptides) organize themselves into ordered structures at water-membrane interfaces and insert into membranes? (2) How do peptides aggregate to form membrane-spannin(y structures (e.g., channels)? (3) By what mechanisms do such aggregates perform their functions? The simulations are performed using the molecular dynamics (MD) method. In this method, Newton's equations of motion for each atom in the system are solved iteratively. At each time step, the forces exerted on each atom by the remaining atoms are evaluated by dividing them into two parts. Short-range forces are calculated directly in real space while long-range forces are evaluated in reciprocal space, usually using a particle-mesh algorithm which is of order O(NlnN). Currently, a time step of 2 femtoseconds is typically used, thereby making studies of problems occurring on multi-nanosecond time scales (10(exp 6) - 10(exp 8) time steps) accessible. To address a broader range of problems, simulations need to be extended by three orders of magnitude. Such an extension requires both algorithmic improvements and codes scalable to a large number of parallel

  11. Robotic Vehicle Proxy Simulation Project (United States)

    National Aeronautics and Space Administration — Energid Technologies proposes the development of a digital simulation that can replace robotic vehicles in field studies. This proxy simulation will model the...

  12. Combining Narrative and Numerical Simulation

    DEFF Research Database (Denmark)

    Hansen, Mette Sanne; Ladeby, Klaes Rohde; Rasmussen, Lauge Baungaard


    Strategic simulation is the combination of narrative and numerical simulation and can be used as a tool to support strategic decision making by providing different scenarios in combination with computer modelling. The core of the combined simulation approach (CSA) is to make it possible for decis......Strategic simulation is the combination of narrative and numerical simulation and can be used as a tool to support strategic decision making by providing different scenarios in combination with computer modelling. The core of the combined simulation approach (CSA) is to make it possible...... to the decision making in operations and production management by providing new insights into modelling and simulation based on the combined narrative and numerical simulation approach as a tool for strategy making. The research question asks, “How can the CSA be applied in a practical context to support strategy...

  13. Simulating A Factory Via Software (United States)

    Schroer, Bernard J.; Zhang, Shou X.; Tseng, Fan T.


    Software system generates simulation program from user's responses to questions. AMPS/PC system is simulation software tool designed to aid user in defining specifications of manufacturing environment and then automatically writing code for target simulation language, GPSS/PC. Domain of problems AMPS/PC simulates is that of manufacturing assembly lines with subassembly lines and manufacturing cells. Written in Turbo Pascal Version 4.

  14. Perfect simulation of Hawkes processes

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    their branching and conditional independence structure, useful approximations of the distribution function for the length of a cluster are derived. This is used to construct upper and lower processes for the perfect simulation algorithm. Examples of applications and empirical results are presented.......This article concerns a perfect simulation algorithm for unmarked and marked Hawkes processes. The usual stratihtforward simulation algorithm suffers from edge effects, whereas our perfect simulation algorithm does not. By viewing Hawkes processes as Poisson cluster processes and using...

  15. Simulation Activity in Otolaryngology Residencies. (United States)

    Deutsch, Ellen S; Wiet, Gregory J; Seidman, Michael; Hussey, Heather M; Malekzadeh, Sonya; Fried, Marvin P


    Simulation has become a valuable tool in medical education, and several specialties accept or require simulation as a resource for resident training or assessment as well as for board certification or maintenance of certification. This study investigates current simulation resources and activities in US otolaryngology residency programs and examines interest in advancing simulation training and assessment within the specialty. Web-based survey. US otolaryngology residency training programs. An electronic web-based survey was disseminated to all US otolaryngology program directors to determine their respective institutional and departmental simulation resources, existing simulation activities, and interest in further simulation initiatives. Descriptive results are reported. Responses were received from 43 of 104 (43%) residency programs. Simulation capabilities and resources are available in most respondents' institutions (78.6% report onsite resources; 73.8% report availability of models, manikins, and devices). Most respondents (61%) report limited simulation activity within otolaryngology. Areas of simulation are broad, addressing technical and nontechnical skills related to clinical training (94%). Simulation is infrequently used for research, credentialing, or systems improvement. The majority of respondents (83.8%) expressed interest in participating in multicenter trials of simulation initiatives. Most respondents from otolaryngology residency programs have incorporated some simulation into their curriculum. Interest among program directors to participate in future multicenter trials appears high. Future research efforts in this area should aim to determine optimal simulators and simulation activities for training and assessment as well as how to best incorporate simulation into otolaryngology residency training programs. © American Academy of Otolaryngology—Head and Neck Surgery Foundation 2015.

  16. Innovative Simulation Strategies in Education


    Michelle Aebersold; Dana Tschannen; Melissa Bathish


    The use of simulation in the undergraduate nursing curriculum is gaining popularity and is becoming a foundation of many nursing programs. The purpose of this paper is to highlight a new simulation teaching strategy, virtual reality (VR) simulation, which capitalizes on the technological skills of the new generation student. This small-scale pilot study focused on improving interpersonal skills in senior level nursing students using VR simulation. In this study, a repeated-measure design was ...

  17. Simulation Of Cell Signaling Communications


    Huertas González, Daniel


    Simulation of cell signaling communications using the Omnet ++ Simulation Framework and molecular dynamics algorithms. [ANGLÈS] Cells, whether they be unicellular organisms or belong to a multicellular organism, are able to encode and transmit information to each other by means of signaling molecules and the diffusion processes in the extracellular fluid. The aim of this project is to develop an Event Driven Molecular Dynamics (EDMD) simulator using the Omnet++ Simulation Framework in orde...

  18. Message-passing multiprocessor simulator

    Energy Technology Data Exchange (ETDEWEB)

    Dunigan, T.H.


    The structure and use of a message-passing multiprocessor simulator are described. The simulator provides a multitasking environment for the development of algorithms for parallel processors using either shared or local memories. The simulator may be used from C or FORTRAN and provides a library of subroutines for task control and message passing. The simulator produces a trace file that can be used for debugging, performance analysis, or graphical display. 9 refs., 7 figs.

  19. Simulation of the SAGE spectrometer (United States)

    Cox, D. M.; Konki, J.; Greenlees, P. T.; Hauschild, K.; Herzberg, R.-D.; Pakarinen, J.; Papadakis, P.; Rahkila, P.; Sandzelius, M.; Sorri, J.


    The SAGE spectrometer combines a Ge-detector array with a Si detector to allow simultaneous detection of γ-rays and electrons. A comprehensive GEANT4 simulation package of the SAGE spectrometer has been developed with the ability to simulate the expected datasets based on user input files. The measured performance of the spectrometer is compared to the results obtained from the simulations.


    Directory of Open Access Journals (Sweden)

    Olga I. Babina


    Full Text Available The paper describes the development of a simulation model of the Services system of Research Library of Library and Publishing Complex of Siberian Federal University. Discrete-event simulation and simulation software ExtendSim are used. The focus is on performance indicators of library services.

  1. Bio-threat microparticle simulants (United States)

    Farquar, George Roy; Leif, Roald N


    A bio-threat simulant that includes a carrier and DNA encapsulated in the carrier. Also a method of making a simulant including the steps of providing a carrier and encapsulating DNA in the carrier to produce the bio-threat simulant.

  2. Simulation tools for future interferometers


    Yamamoto, H.; Barton, M.; Bhawal, B.; Evans, M.; Yoshida, S


    For the design and commissioning of the LIGO interferometer, simulation tools have been used explicitly and implicitly. The requirement of the advanced LIGO interferometer is much more demanding than the first generation interferometer. Development of revised simulation tools for future interferometers are underway in the LIGO Laboratory. The outline of those simulation tools and applications are discussed.

  3. Mathematics Career Simulations: An Invitation (United States)

    Sinn, Robb; Phipps, Marnie


    A simulated academic career was combined with inquiry-based learning in an upper-division undergraduate mathematics course. Concepts such as tenure, professional conferences and journals were simulated. Simulation procedures were combined with student-led, inquiry-based classroom formats. A qualitative analysis (ethnography) describes the culture…

  4. Simulation for the social scientist

    National Research Council Canada - National Science Library

    Gilbert, G. Nigel; Troitzsch, Klaus G


    ... sciences. Simulation for the Social Scientist is a practical textbook on the techniques of building computer simulations to assist understanding of social and economic issues and problems. This authoritative book details all the common approaches to social simulation to provide social scientists with an appreciation of the literature and allow those w...

  5. Redesigned Human Metabolic Simulator (United States)

    Duffield, Bruce; Jeng, Frank; Lange, Kevin


    A design has been formulated for a proposed improved version of an apparatus that simulates atmospheric effects of human respiration by introducing controlled amounts of carbon dioxide, water vapor, and heat into the air. Denoted a human metabolic simulator (HMS), the apparatus is used for testing life-support equipment when human test subjects are not available. The prior version of the HMS, to be replaced, was designed to simulate the respiratory effects of as many as four persons. It exploits the catalytic combustion of methyl acetate, for which the respiratory quotient (the molar ratio of carbon dioxide produced to oxygen consumed) is very close to the human respiratory quotient of about 0.86. The design of the improved HMS provides for simulation of the respiratory effects of as many as eight persons at various levels of activity. The design would also increase safety by eliminating the use of combustion. The improved HMS (see figure) would include a computer that would exert overall control. The computer would calculate the required amounts of oxygen removal, carbon dioxide addition, water addition, and heat addition by use of empirical equations for metabolic profiles of respiration and heat. A blower would circulate air between the HMS and a chamber containing a life-support system to be tested. With the help of feedback from a mass flowmeter, the blower speed would be adjusted to regulate the rate of flow according to the number of persons to be simulated and to a temperature-regulation requirement (the air temperature would indirectly depend on the rate of flow, among other parameters). Oxygen would be removed from the circulating air by means of a commercially available molecular sieve configured as an oxygen concentrator. Oxygen, argon, and trace amounts of nitrogen would pass through a bed in the molecular sieve while carbon dioxide, the majority of nitrogen, and other trace gases would be trapped by the bed and subsequently returned to the chamber. If

  6. Advances in Intelligent Modelling and Simulation Simulation Tools and Applications

    CERN Document Server

    Oplatková, Zuzana; Carvalho, Marco; Kisiel-Dorohinicki, Marek


    The human capacity to abstract complex systems and phenomena into simplified models has played a critical role in the rapid evolution of our modern industrial processes and scientific research. As a science and an art, Modelling and Simulation have been one of the core enablers of this remarkable human trace, and have become a topic of great importance for researchers and practitioners. This book was created to compile some of the most recent concepts, advances, challenges and ideas associated with Intelligent Modelling and Simulation frameworks, tools and applications. The first chapter discusses the important aspects of a human interaction and the correct interpretation of results during simulations. The second chapter gets to the heart of the analysis of entrepreneurship by means of agent-based modelling and simulations. The following three chapters bring together the central theme of simulation frameworks, first describing an agent-based simulation framework, then a simulator for electrical machines, and...

  7. Plasma Simulation Program

    Energy Technology Data Exchange (ETDEWEB)

    Greenwald, Martin


    Many others in the fusion energy and advanced scientific computing communities participated in the development of this plan. The core planning team is grateful for their important contributions. This summary is meant as a quick overview the Fusion Simulation Program's (FSP's) purpose and intentions. There are several additional documents referenced within this one and all are supplemental or flow down from this Program Plan. The overall science goal of the DOE Office of Fusion Energy Sciences (FES) Fusion Simulation Program (FSP) is to develop predictive simulation capability for magnetically confined fusion plasmas at an unprecedented level of integration and fidelity. This will directly support and enable effective U.S. participation in International Thermonuclear Experimental Reactor (ITER) research and the overall mission of delivering practical fusion energy. The FSP will address a rich set of scientific issues together with experimental programs, producing validated integrated physics results. This is very well aligned with the mission of the ITER Organization to coordinate with its members the integrated modeling and control of fusion plasmas, including benchmarking and validation activities. [1]. Initial FSP research will focus on two critical Integrated Science Application (ISA) areas: ISA1, the plasma edge; and ISA2, whole device modeling (WDM) including disruption avoidance. The first of these problems involves the narrow plasma boundary layer and its complex interactions with the plasma core and the surrounding material wall. The second requires development of a computationally tractable, but comprehensive model that describes all equilibrium and dynamic processes at a sufficient level of detail to provide useful prediction of the temporal evolution of fusion plasma experiments. The initial driver for the whole device model will be prediction and avoidance of discharge-terminating disruptions, especially at high performance, which are a

  8. Binaural room simulation (United States)

    Lehnert, H.; Blauert, Jens; Pompetzki, W.


    In every-day listening the auditory event perceived by a listener is determined not only by the sound signal that a sound emits but also by a variety of environmental parameters. These parameters are the position, orientation and directional characteristics of the sound source, the listener's position and orientation, the geometrical and acoustical properties of surfaces which affect the sound field and the sound propagation properties of the surrounding fluid. A complete set of these parameters can be called an Acoustic Environment. If the auditory event perceived by a listener is manipulated in such a way that the listener is shifted acoustically into a different acoustic environment without moving himself physically, a Virtual Acoustic Environment has been created. Here, we deal with a special technique to set up nearly arbitrary Virtual Acoustic Environments, the Binaural Room Simulation. The purpose of the Binaural Room Simulation is to compute the binaural impulse response related to a virtual acoustic environment taking into account all parameters mentioned above. One possible way to describe a Virtual Acoustic Environment is the concept of the virtual sound sources. Each of the virtual sources emits a certain signal which is correlated but not necessarily identical with the signal emitted by the direct sound source. If source and receiver are non moving, the acoustic environment becomes a linear time-invariant system. Then, the Binaural Impulse Response from the source to a listener' s eardrums contains all relevant auditory information related to the Virtual Acoustic Environment. Listening into the simulated environment can easily be achieved by convolving the Binaural Impulse Response with dry signals and representing the results via headphones.

  9. Febrile Seizure Simulation

    Directory of Open Access Journals (Sweden)

    Victor Cisneros


    Full Text Available Audience: This simulation session is appropriate for medical students, community physicians, or residents in emergency medicine, neurology, pediatrics, or family medicine. Introduction: Febrile seizures are the most common form of seizures in childhood; they are thought to occur in 2-5% of all children.1-3 Febrile seizures are defined as a seizure in association with a febrile illness in children without a central nervous system infection, previous afebrile seizure, known brain disorder, or electrolyte abnormalities. 1,2 They typically occur between 6 months and 18 months of age though they can occur up to 5 years of age.3 Febrile seizures are categorized as: simple (generalized seizure lasting less than 15 minutes in a child aged 6 months to 5 years, and less than 1 in a 24 hour period or complex (a focal seizure or generalized seizure lasting greater than 15 minutes, or multiple seizures in a 24 hour period. 1,3 Treatment for febrile seizures is based on treating the underlying cause of the fever and giving reassurance and education to the parents.2 Mortality is extremely rare, and there is no difference in the patient’s cognitive abilities after a febrile seizure, even when the seizure is prolonged.1 Objectives: At the end of this simulation session, the learner will be able to: 1 discuss the management of febrile seizures 2 discuss when placement of an advanced airway is indicated in the management of a febrile seizure 3 list the risk factors for febrile seizures 4 prepare a differential diagnosis for the causes of febrile seizures 5 educate family members on febrile seizures. Methods: This educational session is a high-fidelity simulation.

  10. SAR Simulations & Safety. (United States)

    Fiedler, Thomas M; Ladd, Mark E; Bitz, Andreas K


    At ultra-high fields, the assessment of radiofrequency (RF) safety presents several new challenges compared to low-field systems. Multi-channel RF transmit coils in combination with parallel transmit techniques produce time-dependent and spatially varying power loss densities in the tissue. Further, in ultra-high-field systems, localized field effects can be more pronounced due to a transition from the quasi stationary to the electromagnetic field regime. Consequently, local information on the RF field is required for reliable RF safety assessment as well as for monitoring of RF exposure during MR examinations. Numerical RF and thermal simulations for realistic exposure scenarios with anatomical body models are currently the only practical way to obtain the requisite local information on magnetic and electric field distributions as well as tissue temperature. In this article, safety regulations and the fundamental characteristics of RF field distributions in ultra-high-field systems are reviewed. Numerical methods for computation of RF fields as well as typical requirements for the analysis of realistic multi-channel RF exposure scenarios including anatomical body models are highlighted. In recent years, computation of the local tissue temperature has become of increasing interest, since a more accurate safety assessment is expected because temperature is directly related to tissue damage. Regarding thermal simulation, bio-heat transfer models and approaches for taking into account the physiological response of the human body to RF exposure are discussed. In addition, suitable methods are presented to validate calculated RF and thermal results with measurements. Finally, the concept of generalized simulation-based specific absorption rate (SAR) matrix models is discussed. These models can be incorporated into local SAR monitoring in multi-channel MR systems and allow the design of RF pulses under constraints for local SAR. Copyright © 2017 Elsevier Inc. All rights


    Energy Technology Data Exchange (ETDEWEB)

    Michael A. Romano


    This report details the testing equipment, procedures and results performed under Task 7.2 Sealing Simulated Leaks. In terms of our ability to seal leaks identified in the technical topical report, Analysis of Current Field Data, we were 100% successful. In regards to maintaining seal integrity after pigging operations we achieved varying degrees of success. Internal Corrosion defects proved to be the most resistant to the effects of pigging while External Corrosion proved to be the least resistant. Overall, with limitations, pressure activated sealant technology would be a viable option under the right circumstances.

  12. Simulation 󈨔 Symposium. (United States)


    a.m. Plenary Session II Dr. Frohberg (FRG) The International Linkage of Open Exchange Models for World Food Supply (Invited Lecture) 10:00 - 10:30...Marchis (Italy) Modeling and Identification of a Counterflow Heat Exchanger 3:00 - 3:20 p.m. A. Bonnemay (France) Utilisation do systhmes algibro...Switzerland Stockage de chaleur faible profondeur: Simulation par elements finis 3:40 - 4:00 p.m. A. Rizk Abu El-Wafa / M. Tawfik / M.S. Mansour (Egypt) Digital

  13. Simulated metaphors of love

    DEFF Research Database (Denmark)

    Möring, Sebastian Martin


    Recently several games about love relationships have been published, such as The Marriage (Humble 2006, see figure 1), Love (Contrebasse 2010, see figure 2) and My Divorce (Douville 2010). At first play they do not really reveal what they are about, as they are semiotically abstract, i...... drawn from the field of rhetoric between literal and non-literal speech, of which the latter is often referred to as being metaphorical. Thus, one can say there seem to exist two different kinds of games: (a) detailed, realistic and mimetic simulations and (b) abstract and non-realistic metaphors...

  14. RPC gamma sensitivity simulation

    CERN Document Server

    Altieri, S; Bruno, G; Gianini, G; Merlo, M; Ratti, S P; Riccardi, C; Torre, P; Viola, L; Vitulo, P; Abbrescia, M; Colaleo, A; Iaselli, Giuseppe; Loddo, F; Maggi, M; Marangelli, B; Natali, S; Nuzzo, S; Pugliese, G; Ranieri, A; Romano, F; Salvemini, A


    A method to simulate resistive plate chambers (RPCs) gamma sensitivity has been developed using a Monte Carlo code. The sensitivity has been evaluated as a function of the gamma energy in the range 0.1-100 MeV and for different spectra. To evaluate the response of the detector in a Large Hadron Collider (LHC) background environment the gamma energy spectrum expected in the CMS muon barrel has been taken into account and the RPC gamma sensitivity evaluated as a function of the detector size. (3 refs).

  15. A Functional Interplay between 5-Lipoxygenase and μ-Calpain Affects Survival and Cytokine Profile of Human Jurkat T Lymphocyte Exposed to Simulated Microgravity

    Directory of Open Access Journals (Sweden)

    Valeria Gasperi


    Full Text Available A growing body of evidence strongly indicates that both simulated and authentic weightlessness exert a broad range of effects on mammalian tissues and cells, including impairment of immune cell function and increased apoptotic death. We previously reported that microgravity-dependent activation of 5-lipoxygenase (5-LOX might play a central role in the initiation of apoptosis in human T lymphocytes, suggesting that the upregulation of this enzyme might be (at least in part responsible for immunodepression observed in astronauts during space flights. Herein, we supplement novel information about the molecular mechanisms underlying microgravity-triggered apoptotic cell death and immune system deregulation, demonstrating that under simulated microgravity human Jurkat T cells increase the content of cytosolic DNA fragments and cytochrome c (typical hallmarks of apoptosis and have an upregulated expression and activity of µ-calpain. These events were paralleled by the unbalance of interleukin- (IL- 2 and interferon- (INF- γ, anti- and proapoptotic cytokines, respectively, that seemed to be dependent on the functional interplay between 5-LOX and µ-calpain. Indeed, we report unprecedented evidence that 5-LOX inhibition reduced apoptotic death, restored the initial IL-2/INF-γ ratio, and more importantly reverted µ-calpain activation induced by simulated microgravity.

  16. Semiconductor device physics and simulation

    CERN Document Server

    Yuan, J S


    This volume provides thorough coverage of modern semiconductor devices -including hetero- and homo-junction devices-using a two-dimensional simulator (MEDICI) to perform the analysis and generate simulation results Each device is examined in terms of dc, ac, and transient simulator results; relevant device physics; and implications for design and analysis Two hundred forty-four useful figures illustrate the physical mechanisms and characteristics of the devices simulated Comprehensive and carefully organized, Semiconductor Device Physics and Simulation is the ideal bridge from device physics to practical device design

  17. Simulators for the Internet of Things




    The thesis delivers an extensive review of free and open-source simulation tools useful for IoT simulation. The work deals with free simulators and other tools and sources applicable to simulation of IoT use cases. Roughly 80 tools and other sources were reviewed. Different application domain simulators were enlisted (smart home, connected vehicles, smart city, smart grid, UAV...), network simulators, WSN simulators, discrete event simulators, virtualization tools, emulators and simulators of...

  18. Pellet plant energy simulator (United States)

    Bordeasu, D.; Vasquez Pulido, T.; Nielsen, C.


    The Pellet Plant energy simulator is a software based on advanced algorithms which has the main purpose to see the response of a pellet plant regarding certain location conditions. It combines energy provided by a combined heat and power, and/or by a combustion chamber with the energy consumption of the pellet factory and information regarding weather conditions in order to predict the biomass consumption of the pellet factory together with the combined heat and power, and/or with the biomass consumption of the combustion chamber. The user of the software will not only be able to plan smart the biomass acquisition and estimate its cost, but also to plan smart the preventive maintenance (charcoal cleaning in case of a gasification plant) and use the pellet plant at the maximum output regarding weather conditions and biomass moisture. The software can also be used in order to execute a more precise feasibility study for a pellet plant in a certain location. The paper outlines the algorithm that supports the Pellet Plant Energy Simulator idea and presents preliminary tests results that supports the discussion and implementation of the system

  19. Reactor Simulator Testing Overview (United States)

    Schoenfeld, Michael P.


    Test Objectives Summary: a) Verify operation of the core simulator, the instrumentation & control system, and the ground support gas and vacuum test equipment. b) Examine cooling & heat regeneration performance of the cold trap purification. c) Test the ALIP pump at voltages beyond 120V to see if the targeted mass flow rate of 1.75 kg/s can be obtained in the RxSim. Testing Highlights: a) Gas and vacuum ground support test equipment performed effectively for operations (NaK fill, loop pressurization, and NaK drain). b) Instrumentation & Control system effectively controlled loop temperature and flow rates or pump voltage to targeted settings and ramped within prescribed constraints. It effectively interacted with reactor simulator control model and defaulted back to temperature control mode if the transient fluctuations didn't dampen. c) Cold trap design was able to obtain the targeted cold temperature of 480 K. An outlet temperature of 636 K was obtained which was lower than the predicted 750 K but 156 K higher than the minimum temperature indicating the design provided some heat regeneration. d) ALIP produce a maximum flow rate of 1.53 kg/s at 800 K when operated at 150 V and 53 Hz.

  20. Reactor Simulator Testing (United States)

    Schoenfeld, Michael P.; Webster, Kenny L.; Pearson, Boise J.


    As part of the Nuclear Systems Office Fission Surface Power Technology Demonstration Unit (TDU) project, a reactor simulator test loop (RxSim) was design & built to perform integrated testing of the TDU components. In particular, the objectives of RxSim testing was to verify the operation of the core simulator, the instrumentation and control system, and the ground support gas and vacuum test equipment. In addition, it was decided to include a thermal test of a cold trap purification design and a pump performance test at pump voltages up to 150 V since the targeted mass flow rate of 1.75 kg/s was not obtained in the RxSim at the originally constrained voltage of 120 V. This paper summarizes RxSim testing. The gas and vacuum ground support test equipment performed effectively in NaK fill, loop pressurization, and NaK drain operations. The instrumentation and control system effectively controlled loop temperature and flow rates or pump voltage to targeted settings. The cold trap design was able to obtain the targeted cold temperature of 480 K. An outlet temperature of 636 K was obtained which was lower than the predicted 750 K but 156 K higher than the cold temperature indicating the design provided some heat regeneration. The annular linear induction pump (ALIP) tested was able to produce a maximum flow rate of 1.53 kg/s at 800 K when operated at 150 V and 53 Hz.

  1. Confidence in Numerical Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Hemez, Francois M. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)


    This PowerPoint presentation offers a high-level discussion of uncertainty, confidence and credibility in scientific Modeling and Simulation (M&S). It begins by briefly evoking M&S trends in computational physics and engineering. The first thrust of the discussion is to emphasize that the role of M&S in decision-making is either to support reasoning by similarity or to “forecast,” that is, make predictions about the future or extrapolate to settings or environments that cannot be tested experimentally. The second thrust is to explain that M&S-aided decision-making is an exercise in uncertainty management. The three broad classes of uncertainty in computational physics and engineering are variability and randomness, numerical uncertainty and model-form uncertainty. The last part of the discussion addresses how scientists “think.” This thought process parallels the scientific method where by a hypothesis is formulated, often accompanied by simplifying assumptions, then, physical experiments and numerical simulations are performed to confirm or reject the hypothesis. “Confidence” derives, not just from the levels of training and experience of analysts, but also from the rigor with which these assessments are performed, documented and peer-reviewed.

  2. Physics-Based Simulator for NEO Exploration Analysis & Simulation (United States)

    Balaram, J.; Cameron, J.; Jain, A.; Kline, H.; Lim, C.; Mazhar, H.; Myint, S.; Nayar, H.; Patton, R.; Pomerantz, M.; hide


    As part of the Space Exploration Analysis and Simulation (SEAS) task, the National Aeronautics and Space Administration (NASA) is using physics-based simulations at NASA's Jet Propulsion Laboratory (JPL) to explore potential surface and near-surface mission operations at Near Earth Objects (NEOs). The simulator is under development at JPL and can be used to provide detailed analysis of various surface and near-surface NEO robotic and human exploration concepts. In this paper we describe the SEAS simulator and provide examples of recent mission systems and operations concepts investigated using the simulation. We also present related analysis work and tools developed for both the SEAS task as well as general modeling, analysis and simulation capabilites for asteroid/small-body objects.

  3. Gordon Fullerton in PCA (MD-11) Simulator (United States)


    NASA research pilot Gordon Fullerton 'flying' in the MD-11 simulator during the Propulsion Controlled Aircraft (PCA) project. This investigation grew out of the crash of a DC-10 airliner on July 19, 1989, following an explosion in the rear engine which caused the loss of all manual flight controls. The flight crew attempted to control the airliner using only the thrust from the two remaining engines. Although the DC-10 crashed during the landing attempt, 184 of the 296 passengers and crew aboard survived. The PCA effort at the Dryden Flight Research Center grew out of the crash, and attempted to develop a means to successfully land an aircraft using only engine thrust. After more than five years of work, on August 29, 1995, Gordon Fullerton made the first PCA touchdown aboard an MD-11 airliner (a later version of the DC-10). The concept was further refined over the years that followed this first landing. Simulators were essential ingredients of the PCA development process. The feasibility of the concept was first tested with an F-15 simulator, then the results of actual flight tests in an F-15 were incorporated back into the simulator. Additional simulations were run on the Boeing 720 airliner simulator used in the Controlled Impact Demonstration project. After the MD-11 test landings, Boeing 747 and 757 simulators tested a wide range of possible situations. Simulations even helped develop a method of landing an airliner if it lost its complete hydraulic system as well as a wing engine, by transferring fuel to shift the center of gravity toward the working engine. The most extreme procedure was undertaken in a 747 simulator. The aircraft simulated the loss of the hydraulic system at 35,000 feet and rolled upside down. Then, the PCA mode was engaged, the airliner righted itself, leveled its wings, and made an approach nearly identical to that of a normal auto landing.

  4. Numerical simulation of welding

    DEFF Research Database (Denmark)

    Hansen, Jan Langkjær; Thorborg, Jesper

    Aim of project:To analyse and model the transient thermal field from arc welding (SMAW, V-shaped buttweld in 15mm plate) and to some extend the mechanical response due to the thermal field. - To implement this model in a general purpose finite element program such as ABAQUS.The simulation...... stress is also taken into account.Work carried out:With few means it is possible to define a thermal model which describes the thermal field from the welding process in reasonable agreement with reality. Identical results are found with ABAQUS and Rosenthal’s analytical solution of the governing heat...... transfer equation under same conditions. It is relative easy tointroduce boundary conditions such as convection and radiation where not surprisingly the radiation has the greatest influence especially from the high temperature regions in the weld pool and the heat affected zone.Due to the large temperature...

  5. Phobos Mobility Simulation (United States)

    Bielski, Paul


    Phobos, the larger of Mars' moons, provides a potential staging location for human exploration of the Martian surface. Its low gravity (about 1/200th of Earth) and lack of atmosphere makes it an attractive destination before a more complex human landing on Mars is attempted. While easier to approach and depart than Mars itself, Phobos provides unique challenges to visiting crews. It is irregularly shaped, so its local gravitational field does not always point straight down with respect to the visible horizon. It is very close to Mars and tidally locked, so the Martian gravity gradient and applied acceleration greatly affect the perceived surface gravity direction and magnitude. This simulation allows the assessment of unique mobility approaches on the surface of Phobos, including hopping in particular.

  6. Memory Circuit Fault Simulator (United States)

    Sheldon, Douglas J.; McClure, Tucker


    Spacecraft are known to experience significant memory part-related failures and problems, both pre- and postlaunch. These memory parts include both static and dynamic memories (SRAM and DRAM). These failures manifest themselves in a variety of ways, such as pattern-sensitive failures, timingsensitive failures, etc. Because of the mission critical nature memory devices play in spacecraft architecture and operation, understanding their failure modes is vital to successful mission operation. To support this need, a generic simulation tool that can model different data patterns in conjunction with variable write and read conditions was developed. This tool is a mathematical and graphical way to embed pattern, electrical, and physical information to perform what-if analysis as part of a root cause failure analysis effort.

  7. Wind shear and turbulence simulation (United States)

    Bowles, Roland L.


    The aviation community is increasing its reliance on flight simulators. This is true both in pilot training and in research and development. In moving research concepts through the development pipeline, there is a sequence of events which take place: analysis, ground based simulation, inflight simulation, and flight testing. Increasing fidelity as progress toward the flight testing arena is accompanied by increasing cost. The question that seems to be posed in relation to the meteorological aspects of flight simulation is, How much fidelity is enough and can it be quantified. As a part of the Langley Simulation Technology Program, there are three principal areas of focus, one being improved simulation of weather hazards. A close liaison with the JAWS project was established because of the Langley Simulation Technology interests regarding reliable simulation of severe convective weather phenomena and their impact on aviation systems. Simulation offers the only feasible approach for examining the utility of new technology and new procedures for coping with severe convective weather phenomena such as wind shear. These simulation concepts are discussed in detail.

  8. Performance limitations of parallel simulations

    Directory of Open Access Journals (Sweden)

    Liang Chen


    Full Text Available This study shows how the performance of a parallel simulation may be affected by the structure of the system being simulated. We consider a wide class of “linearly synchronous” simulations consisting of asynchronous and synchronous parallel simulations (or other distributed-processing systems, with conservative or optimistic protocols, in which the differences in the virtual times of the logical processes being simulated in real time t are of the order o(t as t tends to infinity. Using a random time transformation idea, we show how a simulation's processing rate in real time is related to the throughput rates in virtual time of the system being simulated. This relation is the basis for establishing upper bounds on simulation processing rates. The bounds for the rates are tight and are close to the actual rates as numerical experiments indicate. We use the bounds to determine the maximum number of processors that a simulation can effectively use. The bounds also give insight into efficient assignment of processors to the logical processes in a simulation.

  9. Simulations of Titan's paleoclimate (United States)

    Lora, Juan M.; Lunine, Jonathan I.; Russell, Joellen L.; Hayes, Alexander G.


    We investigate the effects of varying Saturn's orbit on the atmospheric circulation and surface methane distribution of Titan. Using a new general circulation model of Titan's atmosphere, we simulate its climate under four characteristic configurations of orbital parameters that correspond to snapshots over the past 42 kyr, capturing the amplitude range of long-period cyclic variations in eccentricity and longitude of perihelion. The model, which covers pressures from the surface to 0.5 mbar, reproduces the present-day temperature profile and tropospheric superrotation. In all four simulations, the atmosphere efficiently transports methane poleward, drying out the low- and mid-latitudes, indicating that these regions have been desert-like for at least tens of thousands of years. Though circulation patterns are not significantly different, the amount of surface methane that builds up over either pole strongly depends on the insolation distribution; in the present-day, methane builds up preferentially in the north, in agreement with observations, where summer is milder but longer. The same is true, to a lesser extent, for the configuration 14 kyr ago, while the south pole gains more methane in the case for 28 kyr ago, and the system is almost symmetric 42 kyr ago. This confirms the hypothesis that orbital forcing influences the distribution of surface liquids, and that the current observed asymmetry could have been partially or fully reversed in the past. The evolution of the orbital forcing implies that the surface reservoir is transported on timescales of ∼30 kyr, in which case the asymmetry reverses with a period of ∼125 kyr. Otherwise, the orbital forcing does not produce a net asymmetry over longer timescales, and is not a likely mechanism for generating the observed dichotomy.

  10. Communication Systems Simulation Laboratory (CSSL): Simulation Planning Guide (United States)

    Schlesinger, Adam


    The simulation process, milestones and inputs are unknowns to first-time users of the CSSL. The Simulation Planning Guide aids in establishing expectations for both NASA and non-NASA facility customers. The potential audience for this guide includes both internal and commercial spaceflight hardware/software developers. It is intended to assist their engineering personnel in simulation planning and execution. Material covered includes a roadmap of the simulation process, roles and responsibilities of facility and user, major milestones, facility capabilities, and inputs required by the facility. Samples of deliverables, facility interfaces, and inputs necessary to define scope, cost, and schedule are included as an appendix to the guide.

  11. Eternity Variables to Prove Simulation of Specifications

    NARCIS (Netherlands)

    Hesselink, Wim H.


    Simulations of specifications are introduced as a unification and generalization of refinement mappings, history variables, forward simulations, prophecy variables, and backward simulations. A specification implements another specification if and only if there is a simulation from the first one to

  12. [Clinical Simulation and Emotional Learning]. (United States)

    Afanador, Adalberto Amaya


    At present, the clinical simulation has been incorporated into medical school curriculum. It is considered that the simulation is useful to develop skills, and as such its diffusion. Within the acquisition of skills, meaningful learning is an essential emotional component for the student and this point is essential to optimize the results of the simulation experience. Narrative description on the subject of simulation and the degree of "emotionality." The taxonomy is described for the types of clinical simulation fidelity and correlates it with the degree of emotionality required to achieve significant and lasting learning by students. It is essential to take into account the student's level of emotion in the learning process through simulation strategy. Copyright © 2012 Asociación Colombiana de Psiquiatría. Publicado por Elsevier España. All rights reserved.

  13. Hybrid Simulation of Composite Structures

    DEFF Research Database (Denmark)

    Høgh, Jacob Herold

    Hybrid simulation is a substructural method combining a numerical simulation with a physical experiment. A structure is thereby simulated under the assumption that a substructure’s response is well known and easily modelled while a given substructure is studied more accurately in a physical...... of freedom. In this dissertation the main focus is to develop hybrid simulation for composite structures e.g. wind turbine blades where the boundary between the numerical model and the physical experiment is continues i.e. in principal infinite amount of degrees of freedom. This highly complicates...... the transfer system and the control and monitoring techniques in the shared boundary is therefore a key issue in this type of hybrid simulation. During the research, hybrid simulation platforms have been programmed capable of running on different time scales with advanced control and monitoring techniques...

  14. Simulating Collisions for Hydrokinetic Turbines

    Energy Technology Data Exchange (ETDEWEB)

    Richmond, Marshall C.; Romero Gomez, Pedro DJ; Rakowski, Cynthia L.


    Evaluations of blade-strike on an axial-flow Marine Hydrokinetic turbine were conducted using a conventional methodology as well as an alternative modeling approach proposed in the present document. The proposed methodology integrates the following components into a Computa- tional Fluid Dynamics (CFD) model: (i) advanced eddy-resolving flow simulations, (ii) ambient turbulence based on field data, (iii) moving turbine blades in highly transient flows, and (iv) Lagrangian particles to mimic the potential fish pathways. The sensitivity of blade-strike prob- ability to the following conditions was also evaluated: (i) to the turbulent environment, (ii) to fish size and (iii) to mean stream flow velocity. The proposed methodology provided fraction of collisions and offered the capability of analyzing the causal relationships between the flow envi- ronment and resulting strikes on rotating blades. Overall, the conventional methodology largely overestimates the probability of strike, and lacks the ability to produce potential fish and aquatic biota trajectories as they interact with the rotating turbine. By using a set of experimental corre- lations of exposure-response of living fish colliding on moving blades, the occurrence, frequency and intensity of the particle collisions was next used to calculate the survival rate of fish crossing the MHK turbine. This step indicated survival rates always greater than 98%. Although the proposed CFD framework is computationally more expensive, it provides the advantage of evaluating multiple mechanisms of stress and injury of hydrokinetic turbine devices on fish.

  15. Impact of inulin and okara on Lactobacillus acidophilus La-5 and Bifidobacterium animalis Bb-12 viability in a fermented soy product and probiotic survival under in vitro simulated gastrointestinal conditions


    Bedani, Raquel [UNESP; Rossi, Elizeu Antonio [UNESP; Isay Saad, Susana Marta


    The effect of inulin and/or okara flour on Lactobacillus acidophilus La-5 and Bifidobacterium animalis Bb-12 viability in a fermented soy product (FSP) and on probiotic survival under in vitro simulated gastrointestinal conditions were investigated throughout 28 days of storage at 4 °C. Employing a 22 design, four FSP trials were produced from soymilk fermented with ABT-4 culture (La-5, Bb-12, and Streptococcus thermophilus): FSP (control); FSP-I (with inulin, 3 g/100 mL of soymilk); FSP-O (w...

  16. HADES, A Radiographic Simulation Code

    Energy Technology Data Exchange (ETDEWEB)

    Aufderheide, M.B.; Slone, D.M.; Schach von Wittenau, A.E.


    We describe features of the HADES radiographic simulation code. We begin with a discussion of why it is useful to simulate transmission radiography. The capabilities of HADES are described, followed by an application of HADES to a dynamic experiment recently performed at the Los Alamos Neutron Science Center. We describe quantitative comparisons between experimental data and HADES simulations using a copper step wedge. We conclude with a short discussion of future work planned for HADES.

  17. Simulation of the SAGE spectrometer

    Energy Technology Data Exchange (ETDEWEB)

    Cox, D.M.; Herzberg, R.D. [University of Liverpool, Department of Physics, Oliver Lodge Laboratory, Liverpool (United Kingdom); Konki, J.; Greenlees, P.T.; Pakarinen, J.; Papadakis, P.; Rahkila, P.; Sandzelius, M.; Sorri, J. [University of Jyvaeskylae, Department of Physics, Jyvaeskylae (Finland); Hauschild, K. [Universite Paris-Sud, CSNSM-IN2P3-CNRS, Orsay (France)


    The SAGE spectrometer combines a Ge-detector array with a Si detector to allow simultaneous detection of γ-rays and electrons. A comprehensive GEANT4 simulation package of the SAGE spectrometer has been developed with the ability to simulate the expected datasets based on user input files. The measured performance of the spectrometer is compared to the results obtained from the simulations. (orig.)

  18. Hearthstone simulátor


    Strupek, Martin


    Title: Hearthstone simulator Author: Martin Strupek Department: Department of Software and Computer Science Education Supervisor: Mgr. Jakub Gemrot, Department of Software and Computer Science Education Abstract: The goal of this work was creation of a Hearthstone simulator in C# which would open possibilities for analyzing quality of decks and tactics with the use of artificial intelligence as well as easy implementation of new cards and game rules. Our simulator implements mechanics and car...

  19. Notes on modeling and simulation

    Energy Technology Data Exchange (ETDEWEB)

    Redondo, Antonio [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)


    These notes present a high-level overview of how modeling and simulation are carried out by practitioners. The discussion is of a general nature; no specific techniques are examined but the activities associated with all modeling and simulation approaches are briefly addressed. There is also a discussion of validation and verification and, at the end, a section on why modeling and simulation are useful.

  20. The Psychiatry Consult Adventure Simulation


    Jachna, John S.; Powsner, Seth M.; McIntyre, Patrick J.; Byck, Robert S.


    Evaluating patients on medical and surgical wards for psychiatric problems can be an adventure, from determining the actual reason for the consult request, to finding the medical records and actually interviewing the patient. The PsyConsult Adventure Simulation adapts the excitement of computer adventure game simulations to teaching general hospital psychiatric consultation. The trainee, in the role of a senior medical student, must navigate a simulated hospital environment and deal with mult...

  1. Simulation Model of a Transient

    DEFF Research Database (Denmark)

    Jauch, Clemens; Sørensen, Poul; Bak-Jensen, Birgitte


    This paper describes the simulation model of a controller that enables an active-stall wind turbine to ride through transient faults. The simulated wind turbine is connected to a simple model of a power system. Certain fault scenarios are specified and the turbine shall be able to sustain operation...... in case of such faults. The design of the controller is described and its performance assessed by simulations. The control strategies are explained and the behaviour of the turbine discussed....

  2. Simulation Aided Product Software Development


    Hyvönen, Jani


    This work is a study of simulation environments as tools for product software development from architecture definition phase to testing the actual end product software code. The purpose of the work was to find a feasible way to utilize simulation environments for improving product time to market. The work was initiated to renew the existing simulation methods to correspond the demands of the present-day process of developing products. Work effort mainly consisted of studying the e...

  3. Simulation and Emuliation in NCTUns

    Directory of Open Access Journals (Sweden)

    Antanas Vindašius


    Full Text Available The features of NCTUns simulation environment are presented along with developed models, showing the advantages of this simulation tool. NCTUns gives the ability to reuse kernel TCP/IP stack and therefore to simplify and speedup the simulations, also to make use of any UNIX commands or programs. Presented wireless multihop transmission model for delay and jitter investigation, also wireless multihop video transmission model. Model, employing emulation, enables to evaluate the impact of simulated network not only on flow characteristics, but also on live application reception.Article in Lithuanian

  4. Perfect simulation of Hawkes processes

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl


    their branching and conditional independence structures, useful approximations of the distribution function for the length of a cluster are derived. This is used to construct upper and lower processes for the perfect simulation algorithm. A tail-lightness condition turns out to be of importance......Our objective is to construct a perfect simulation algorithm for unmarked and marked Hawkes processes. The usual straightforward simulation algorithm suffers from edge effects, whereas our perfect simulation algorithm does not. By viewing Hawkes processes as Poisson cluster processes and using...

  5. Training and Simulation in Otolaryngology (United States)

    Wiet, Gregory J.; Stredney, Don; Wan, Dinah


    This article focuses on key issues surrounding the needs and application of simulation technologies for technical skills training in otolaryngology. The discussion includes an overview of key topics in training and learning, the application of these issues in simulation environments, and the subsequent applications of these simulation environments to the field of otolaryngology. Examples of past applications are presented, with discussion of how the interplay of cultural changes in surgical training in general, along with the rapid advancements in technology have shaped and influenced their adoption and adaptation. The authors conclude with emerging trends and potential influences advanced simulation and training will have on technical skills training in otolaryngology. PMID:22032486

  6. Security simulation for vulnerability assessment (United States)

    Hennessey, Brian; Norman, Bradley; Wesson, Robert B.


    This paper discusses simulation technologies developed to "stimulate" an operational command and control security system. The paper discusses simulation techniques used to create a virtual model of a facility in which to conduct vulnerability assessment exercises, performance benchmarking, CONOPS development and operator training. The paper discusses the specific techniques used for creating a 3d virtual environment and simulating streaming IP surveillance cameras and motion detection sensors. In addition the paper discusses advanced scenario creation techniques and the modeling of scenario entities, including vehicles, aircraft and personnel. The paper draws parallels with lessons learned in using Air Traffic Control simulators for operator training, incident recreation, procedure development and pre acquisition planning and testing.

  7. Fast simulation of ultrasound images

    DEFF Research Database (Denmark)

    Jensen, Jørgen Arendt; Nikolov, Svetoslav


    Realistic B-mode and flow images can be simulated with scattering maps based on optical, CT, or MR images or parametric flow models. The image simulation often includes using 200,000 to 1 million point scatterers. One image line typically takes 1800 seconds to compute on a state-of-the-art PC...... be split among a number of PCs for speeding up the simulation. A full 3D one second volume simulation then takes 7,500 seconds on a 32 CPU 600 MHz Pentium III PC cluster....

  8. Scorching heat and numerical simulation; Canicule et simulation numerique

    Energy Technology Data Exchange (ETDEWEB)

    Deque, M


    A simulation of 140 years has been realized with ARPEGE-climat using the hypothesis of the increase of the greenhouse effect gases, of the scenario called A2 by the GIEC. The summer temperature observed at Pais and simulated between 1960 and 2003, as the average temperature in France are presented and discussed. (A.L.B.)

  9. Discrete Event Simulation Computers can be used to simulate the ...

    Indian Academy of Sciences (India)

    IAS Admin

    Department of Computer. Science and Automation. Indian Institute of Science. Bangalore 560 012. Email: Computers can be used to simulate the operation of complex systems and thereby study their performance. This article introduces you to the technique of discrete event simulation through a simple ...

  10. Effective Use of Simulation Means in Collective Mission Simulation

    NARCIS (Netherlands)

    Voogd, J.M.; Lemmers, A.; Gerretsen, A.; Roza, M.; Karelse, R.


    Mission training and rehearsal are vital to successful operations. Advances in modeling and simulation (M&S) technology now allow for Collective Mission Simulation (CMS). The Royal Netherlands Armed Forces have exploited CMS through participation in a number of virtual exercises. The potential of

  11. Simulating publication bias

    DEFF Research Database (Denmark)

    Paldam, Martin

    are made by data variation, while the model is the same. It appears that SR0 generates narrow funnels much at odds with observed funnels, while the other four funnels look more realistic. SR1 to SR4 give the mean a substantial bias that confirms the prior causing the bias. The FAT-PET MRA works well......Economic research typically runs J regressions for each selected for publication – it is often selected as the ‘best’ of the regressions. The paper examines five possible meanings of the word ‘best’: SR0 is ideal selection with no bias; SR1 is polishing: selection by statistical fit; SR2...... is censoring: selection by the size of estimate; SR3 selects the optimal combination of fit and size; and SR4 selects the first satisficing result. The last four SRs are steered by priors and result in bias. The MST and the FAT-PET have been developed for detection and correction of such bias. The simulations...

  12. Least Squared Simulated Errors

    Directory of Open Access Journals (Sweden)

    Peter J. Veazie


    Full Text Available Estimation by minimizing the sum of squared residuals is a common method for parameters of regression functions; however, regression functions are not always known or of interest. Maximizing the likelihood function is an alternative if a distribution can be properly specified. However, cases can arise in which a regression function is not known, no additional moment conditions are indicated, and we have a distribution for the random quantities, but maximum likelihood estimation is difficult to implement. In this article, we present the least squared simulated errors (LSSE estimator for such cases. The conditions for consistency and asymptotic normality are given. Finite sample properties are investigated via Monte Carlo experiments on two examples. Results suggest LSSE can perform well in finite samples. We discuss the estimator’s limitations and conclude that the estimator is a viable option. We recommend Monte Carlo investigation of any given model to judge bias for a particular finite sample size of interest and discern whether asymptotic approximations or resampling techniques are preferable for the construction of tests or confidence intervals.

  13. GRB Simulations in GLAST

    Energy Technology Data Exchange (ETDEWEB)

    Omodei, Nicola; /INFN, Pisa; Battelino, Milan; /Stockholm Observ.; Komin, Nukri; /Montpellier U.; Longo, Francesco; /INFN, Trieste /Trieste U.; McEnery, Julie; /NASA, Goddard; Ryde, Felix; /Denver U.


    The Gamma-ray Large Area Space Telescope (GLAST), scheduled to be launched in fall of 2007, is the next generation satellite for high-energy gamma-ray astronomy. The Large Area Telescope (LAT) is a pair conversion telescope built with a high precision silicon tracker, a segmented CsI electromagnetic calorimeter and a plastic anticoincidence shield. The LAT will survey the sky in the energy range between 20 MeV to more than 300 GeV, shedding light on many issues left open by its highly successful predecessor EGRET. LAT will observe Gamma-Ray Bursts (GRB) in an energy range never explored before; to tie these frontier observations to the better-known properties at lower energies, a second instrument, the GLAST Burst Monitor (GBM) will provide important spectra and timing in the 10 keV to 30 MeV range. We briefly present the instruments onboard the GLAST satellite, their synergy in the GRB observations and the work done so far by the collaboration in simulation, analysis, and GRB sensitivity estimation.

  14. Thermoforming simulation with FEA

    Energy Technology Data Exchange (ETDEWEB)

    Luca, P. de [Engineering Systems International SA, Rungis (France); Pickett, A.K. [T. Queckboerner Engineering Systems International GmbH, Eschborn (Germany); Johnson, A.F. [DLR, Stuttgart (Germany)


    This article describes how the ability to produce high-quality, lightweight structural parts quickly with complex shapes promises to make thermoforming competitive with conventional metal-stamping methods. Thermoforming--the press-forming of continuous fiber-reinforced-thermoplastic (FRTP) sheets--is a promising option for fabricating lightweight structural composite components. Thermoplastic polymers offer improved mechanical and physical properties compared with thermoset polymers, and perhaps most important for industry, they make rapid part production possible using the press-forming process. Despite its promise, thermoforming has not been used to its full potential because tool designers generally rely on trial and error to obtain a detailed understanding of how well this process lends itself to producing a particular part. Because trial-and-error methods are costly and inefficient, tool designers typically cannot gain the sophisticated understanding of the process needed to optimize it for the particular part at hand. Recent advances in the finite-element method may make it easier for tool designers to obtain the insights that have typically come from trial and error. An explicit finite-element code has been developed to simulate the thermoforming process, thereby enabling tool designers to experiment on a computer. The codes use detailed temperature-dependent rheological models to account for intraply shearing, squeeze flow, fiber reorientation, and fiber buckling. They also rely on advanced friction laws--both temperature- and pressure-dependent--to account for the interply sliding mechanism between plies.

  15. Simulation of UAV Systems

    Directory of Open Access Journals (Sweden)

    P. Kaňovský


    Full Text Available The study described in this paper deals with the issue of a design tool for the autopilot of an Unmanned Aerial Vehicle (UAV and the selection of the airdata and inertial system sensors. This project was processed in cooperation with VTUL a PVO o.z. [1]. The feature that distinguishes the autopilot requirements of a UAV (Figs. 1, 7, 8 from the flight systems of conventional manned aircraft is the paradox of controlling a high bandwidth dynamical system using sensors that are in harmony with the low cost low weight objectives that UAV designs are often expected to achieve. The principal function of the autopilot is flight stability, which establishes the UAV as a stable airborne platform that can operate at a precisely defined height. The main sensor for providing this height information is a barometric altimeter. The solution to the UAV autopilot design was realised with simulations using the facilities of Matlab® and in particular Simulink®[2]. 

  16. Simulated Associating Polymer Networks (United States)

    Billen, Joris

    Telechelic associating polymer networks consist of polymer chains terminated by endgroups that have a different chemical composition than the polymer backbone. When dissolved in a solution, the endgroups cluster together to form aggregates. At low temperature, a strongly connected reversible network is formed and the system behaves like a gel. Telechelic networks are of interest since they are representative for biopolymer networks (e.g. F-actin) and are widely used in medical applications (e.g. hydrogels for tissue engineering, wound dressings) and consumer products (e.g. contact lenses, paint thickeners). In this thesis such systems are studied by means of a molecular dynamics/Monte Carlo simulation. At first, the system in rest is studied by means of graph theory. The changes in network topology upon cooling to the gel state, are characterized. Hereto an extensive study of the eigenvalue spectrum of the gel network is performed. As a result, an in-depth investigation of the eigenvalue spectra for spatial ER, scale-free, and small-world networks is carried out. Next, the gel under the application of a constant shear is studied, with a focus on shear banding and the changes in topology under shear. Finally, the relation between the gel transition and percolation is discussed.

  17. MJO Simulation Diagnostics

    Energy Technology Data Exchange (ETDEWEB)

    Waliser, D; Sperber, K; Hendon, H; Kim, D; Maloney, E; Wheeler, M; Weickmann, K; Zhang, C; Donner, L; Gottschalck, J; Higgins, W; Kang, I; Legler, D; Moncrieff, M; Schubert, S; Stern, W; Vitart, F; Wang, B; Wang, W; Woolnough, S


    The Madden-Julian Oscillation (MJO) interacts with, and influences, a wide range of weather and climate phenomena (e.g., monsoons, ENSO, tropical storms, mid-latitude weather), and represents an important, and as yet unexploited, source of predictability at the subseasonal time scale. Despite the important role of the MJO in our climate and weather systems, current global circulation models (GCMs) exhibit considerable shortcomings in representing this phenomenon. These shortcomings have been documented in a number of multi-model comparison studies over the last decade. However, diagnosis of model performance has been challenging, and model progress has been difficult to track, due to the lack of a coherent and standardized set of MJO diagnostics. One of the chief objectives of the US CLIVAR MJO Working Group is the development of observation-based diagnostics for objectively evaluating global model simulations of the MJO in a consistent framework. Motivation for this activity is reviewed, and the intent and justification for a set of diagnostics is provided, along with specification for their calculation, and illustrations of their application. The diagnostics range from relatively simple analyses of variance and correlation, to more sophisticated space-time spectral and empirical orthogonal function analyses. These diagnostic techniques are used to detect MJO signals, to construct composite life-cycles, to identify associations of MJO activity with the mean state, and to describe interannual variability of the MJO.

  18. Error coding simulations (United States)

    Noble, Viveca K.


    There are various elements such as radio frequency interference (RFI) which may induce errors in data being transmitted via a satellite communication link. When a transmission is affected by interference or other error-causing elements, the transmitted data becomes indecipherable. It becomes necessary to implement techniques to recover from these disturbances. The objective of this research is to develop software which simulates error control circuits and evaluate the performance of these modules in various bit error rate environments. The results of the evaluation provide the engineer with information which helps determine the optimal error control scheme. The Consultative Committee for Space Data Systems (CCSDS) recommends the use of Reed-Solomon (RS) and convolutional encoders and Viterbi and RS decoders for error correction. The use of forward error correction techniques greatly reduces the received signal to noise needed for a certain desired bit error rate. The use of concatenated coding, e.g. inner convolutional code and outer RS code, provides even greater coding gain. The 16-bit cyclic redundancy check (CRC) code is recommended by CCSDS for error detection.

  19. Eruca sativa Might Influence the Growth, Survival under Simulated Gastrointestinal Conditions and Some Biological Features of Lactobacillus acidophilus, Lactobacillus plantarum and Lactobacillus rhamnosus Strains

    Directory of Open Access Journals (Sweden)

    Florinda Fratianni


    Full Text Available The growth and viability of three Lactobacillus strains, Lactobacillus acidophilus, Lactobacillus plantarum and Lactobacillus rhamnosus, after their passage through simulated gastric and pancreatic juices were studied as a function of their presence in the growth medium of rocket salad (Eruca sativa. The presence of E. sativa affected some of the biological properties of the strains. For example, L. acidophilus and L. plantarum worked more efficiently in the presence of E. sativa, increasing not only the antioxidant activity of the medium, but also their own antioxidant power and antimicrobial activity; L. rhamnosus was not affected in the same manner. Overall, the presence of vegetables might help to boost, in specific cases, some of the characteristics of lactobacilli, including antioxidant and antimicrobial power.

  20. Effect of the radiation intensity, water turbidity and exposure time on the survival of Cryptosporidium during simulated solar disinfection of drinking water. (United States)

    Gómez-Couso, Hipólito; Fontán-Sainz, María; McGuigan, Kevin G; Ares-Mazás, Elvira


    The solar disinfection (SODIS) technique is a highly effective process that makes use of solar energy to inactivate pathogenic microorganisms in drinking water in developing countries. The pathogenic protozoan parasite Cryptosporidium parvum is often found in surface waters and is associated with waterborne outbreaks of cryptosporidiosis. In the present study, a complete multi-factorial mathematical model was used to investigate the combined effects of the intensity of solar radiation (200, 600 and 900W/m(2) in the 320nm to 10microm range), water turbidity (5, 100 and 300 NTU) and exposure time (4, 8 and 12h) on the viability and infectivity of C. parvum oocysts during simulated SODIS procedures at a constant temperature of 30 degrees C. All three factors had significant effects (p or =600W/m(2) and times of exposure between 8 and 12h were required to reduce the oocyst infectivity in water samples with different degrees of turbidity.

  1. Simulators and the simulation environment: getting the balance right in simulation-based surgical education. (United States)

    Sadideen, Hazim; Hamaoui, Karim; Saadeddin, Munir; Kneebone, Roger


    Simulation occupies a central position in surgical education. It offers a safe environment for trainees to develop and improve their skills through sustained deliberate self-practice and appropriate feedback. This review explores the role of simulators and the simulation environment in light of educational theory to promote effective learning. Information was obtained from peer-reviewed publications, books and online material. A simplistic perspective frames simulation as a means of gaining technical skills on basic models by offering a safe alternative to carrying out procedures on real patients. Although necessary, that aspect of simulation requires greater depth to satisfy the growing demand for alternatives to traditional clinical learning. A more realistic view should frame simulation as a means to gaining mastery within a complex clinical world. In order to strike the balance on simulating an ideal clinical scenario, alignment of the simulator and the simulation environment in the appropriate context appears crucial. Copyright © 2012 Surgical Associates Ltd. Published by Elsevier Ltd. All rights reserved.

  2. Tidal dwarf galaxies in cosmological simulations (United States)

    Ploeckinger, Sylvia; Sharma, Kuldeep; Schaye, Joop; Crain, Robert A.; Schaller, Matthieu; Barber, Christopher


    The formation and evolution of gravitationally bound, star forming substructures in tidal tails of interacting galaxies, called tidal dwarf galaxies (TDG), has been studied, until now, only in idealized simulations of individual pairs of interacting galaxies for pre-determined orbits, mass ratios and gas fractions. Here, we present the first identification of TDG candidates in fully cosmological simulations, specifically the high-resolution simulations of the EAGLE suite. The finite resolution of the simulation limits their ability to predict the exact formation rate and survival time-scale of TDGs, but we show that gravitationally bound baryonic structures in tidal arms already form in current state-of-the-art cosmological simulations. In this case, the orbital parameter, disc orientations as well as stellar and gas masses and the specific angular momentum of the TDG forming galaxies are a direct consequence of cosmic structure formation. We identify TDG candidates in a wide range of environments, such as multiple galaxy mergers, clumpy high-redshift (up to z = 2) galaxies, high-speed encounters and tidal interactions with gas-poor galaxies. We present selection methods, the properties of the identified TDG candidates and a road map for more quantitative analyses using future high-resolution simulations.

  3. A European Social Simulation Association

    NARCIS (Netherlands)

    Moss, S

    This is a proposal to form a European Social Simulation Association (ESSA). ESSA is intended to coordinate with similar organisations in North America, Latin America and Australasia and other regions to organise an international federation to support the development of social simulation research,

  4. Telematics Simulation: Recent Developments & Issues. (United States)

    Sutherland, Janet; Ekker, Knut; Morgan, Konrad; Crookall, David; Carbonell, Amparo Garcia

    Recent developments in Internet technologies have enabled new, more flexible forms of telematic simulation and have raised issues that were not considered in the early days of networked learning. Ultimately, these questions revolve around: (1) the learning cost-effectiveness of telematic simulation (quality and quantity of learning as opposed to…

  5. Quantum CPU and Quantum Simulating


    Wang, An Min


    Making use of an universal quantum network or QCPU proposed by me [6], some special quantum networks for simulating some quantum systems are given out. Specially, it is obtained that the quantum network for the time evolution operator which can simulate, in general, Schr\\"odinger equation.

  6. Fel simulations using distributed computing

    NARCIS (Netherlands)

    Einstein, J.; Biedron, S.G.; Freund, H.P.; Milton, S.V.; Van Der Slot, P. J M; Bernabeu, G.


    While simulation tools are available and have been used regularly for simulating light sources, including Free-Electron Lasers, the increasing availability and lower cost of accelerated computing opens up new opportunities. This paper highlights a method of how accelerating and parallelizing code

  7. Aerodynamic Simulation of Indoor Flight (United States)

    De Leon, Nelson; De Leon, Matthew N.


    We develop a two-dimensional flight simulator for lightweight (less than 10 g) indoor planes. The simulator consists of four coupled time differential equations describing the plane CG, plane pitch and motor. The equations are integrated numerically with appropriate parameters and initial conditions for two planes: (1) Science Olympiad and (2)…

  8. Bridging experiments, models and simulations

    DEFF Research Database (Denmark)

    Carusi, Annamaria; Burrage, Kevin; Rodríguez, Blanca


    electrophysiology. Our analysis reveals that models, simulations, and experiments are intertwined, in an assemblage that is a system itself, namely the model-simulation-experiment (MSE) system. We argue that validation is part of the whole MSE system and is contingent upon 1) understanding and coping with sources...

  9. Fluid simulation for computer graphics

    CERN Document Server

    Bridson, Robert


    Animating fluids like water, smoke, and fire using physics-based simulation is increasingly important in visual effects, in particular in movies, like The Day After Tomorrow, and in computer games. This book provides a practical introduction to fluid simulation for graphics. The focus is on animating fully three-dimensional incompressible flow, from understanding the math and the algorithms to the actual implementation.

  10. Teaching Spatial Autocorrelation by Simulation. (United States)

    Griffith, Daniel A.


    Describes a computer simulation game that helps teach spatial autocorrelation, a fundamental geographic concept referring to the degree and kind of spatial patterning to be found in geographic data. Experiences with this simulation exercise at the State University of New York Buffalo are briefly summarized. (Author/BSR)

  11. Model Calibration for Ship Simulations

    NARCIS (Netherlands)

    E.F.G. van Daalen (Ed); J. Fehribach; T. van Leeuwen (Tristan); C. Reinhardt; N. Schenkels; R. Sheombarsing


    htmlabstractModel calibration is an important aspect in ship simulation. Here, ship motion is described by an ODE which includes tuning parameters that capture complex physical processes such as friction of the hull. In order for the simulations to be realistic for a wide range of

  12. Model Calibration for Ship Simulations

    NARCIS (Netherlands)

    van Daalen, Ed; Fehribach, Joseph; van Leeuwen, Tristan; Reinhardt, Christian; Schenkels, Nick; Sheombarsing, Ray


    Model calibration is an important aspect in ship simulation. Here, ship motion is described by an ODE which includes tuning parameters that capture complex physical processes such as friction of the hull. In order for the simulations to be realistic for a wide range of scenarios these tuning

  13. Massively parallel quantum computer simulator

    NARCIS (Netherlands)

    De Raedt, K.; Michielsen, K.; De Raedt, H.; Trieu, B.; Arnold, G.; Richter, M.; Lippert, Th.; Watanabe, H.; Ito, N.


    We describe portable software to simulate universal quantum computers on massive parallel Computers. We illustrate the use of the simulation software by running various quantum algorithms on different computer architectures, such as a IBM BlueGene/L, a IBM Regatta p690+, a Hitachi SR11000/J1, a Cray

  14. Understanding the Marketplace: A Simulation (United States)

    Vickers, Carole A.


    Describes a marketplace simulation game to help students understand the role of competition and the rationale behind buying and selling food and restaurant services. Cutouts (given in the article) are used to simulate elements in the game. Emphasis is on making decisions in business operation and consumer purchases. (MF)

  15. Electric/Hybrid Vehicle Simulation (United States)

    Slusser, R. A.; Chapman, C. P.; Brennand, J. P.


    ELVEC computer program provides vehicle designer with simulation tool for detailed studies of electric and hybrid vehicle performance and cost. ELVEC simulates performance of user-specified electric or hybrid vehicle under user specified driving schedule profile or operating schedule. ELVEC performs vehicle design and life cycle cost analysis.

  16. Approximate simulation of Hawkes processes

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    This article concerns a simulation algorithm for unmarked and marked Hawkes processes. The algorithm suffers from edge effects but is much faster than the perfect simulation algorithm introduced in our previous work. We derive various useful measures for the error committed when using the algorithm...

  17. Peacebuilding with Games and Simulations (United States)

    Brynen, Rex; Milante, Gary


    Simulations and games can offer valuable insight into the management of conflict and the achievement of peace. This special symposium issue of "Simulation & Gaming" examines several such approaches, used in both educational settings and to prepare practitioners to deal with the concrete challenges of peacebuilding. In the introduction, the authors…

  18. Radio Relics in Cosmological Simulations

    Indian Academy of Sciences (India)

    Radio relics have been discovered in many galaxy clusters. They are believed to trace shock fronts induced by cluster mergers. Cosmological simulations allow us to study merger shocks in detail since the intra-cluster medium is heated by shock dissipation. Using high resolution cosmological simulations, identifying shock ...

  19. Conducting Simulation Studies in Psychometrics (United States)

    Feinberg, Richard A.; Rubright, Jonathan D.


    Simulation studies are fundamental to psychometric discourse and play a crucial role in operational and academic research. Yet, resources for psychometricians interested in conducting simulations are scarce. This Instructional Topics in Educational Measurement Series (ITEMS) module is meant to address this deficiency by providing a comprehensive…

  20. Defense Modeling and Simulation Initiative (United States)


    an artificial battlefield created by computer-based simulation software. The most important constraint associated with this type of simulators is the...techniques for improving on this situation, which draw on artificial intelligence, mathematical programming, and simpler operations research methods...algoriims, data structwres for real-time represenmion and modeling • Develop a global hierarchy ofinn erable environmental models - Develop inteligent

  1. FEL Simulation Using Distributed Computing

    Energy Technology Data Exchange (ETDEWEB)

    Einstein, Joshua [Fermilab; Bernabeu Altayo, Gerard [Fermilab; Biedron, Sandra [Ljubljana U.; Freund, Henry [Colorado State U., Fort Collins; Milton, Stephen [Colorado State U., Fort Collins; van der Slot, Peter [Colorado State U., Fort Collins


    While simulation tools are available and have been used regularly for simulating light sources, the increasing availability and lower cost of GPU-based processing opens up new opportunities. This poster highlights a method of how accelerating and parallelizing code processing through the use of COTS software interfaces.

  2. Simulations of chemical catalysis (United States)

    Smith, Gregory K.

    This dissertation contains simulations of chemical catalysis in both biological and heterogeneous contexts. A mixture of classical, quantum, and hybrid techniques are applied to explore the energy profiles and compare possible chemical mechanisms both within the context of human and bacterial enzymes, as well as exploring surface reactions on a metal catalyst. A brief summary of each project follows. Project 1 - Bacterial Enzyme SpvC The newly discovered SpvC effector protein from Salmonella typhimurium interferes with the host immune response by dephosphorylating mitogen-activated protein kinases (MAPKs) with a beta-elimination mechanism. The dynamics of the enzyme substrate complex of the SpvC effector is investigated with a 3.2 ns molecular dynamics simulation, which reveals that the phosphorylated peptide substrate is tightly held in the active site by a hydrogen bond network and the lysine general base is positioned for the abstraction of the alpha hydrogen. The catalysis is further modeled with density functional theory (DFT) in a truncated active-site model at the B3LYP/6-31 G(d,p) level of theory. The truncated model suggested the reaction proceeds via a single transition state. After including the enzyme environment in ab initio QM/MM studies, it was found to proceed via an E1cB-like pathway, in which the carbanion intermediate is stabilized by an enzyme oxyanion hole provided by Lys104 and Tyr158 of SpvC. Project 2 - Human Enzyme CDK2 Phosphorylation reactions catalyzed by kinases and phosphatases play an indispensable role in cellular signaling, and their malfunctioning is implicated in many diseases. Ab initio quantum mechanical/molecular mechanical studies are reported for the phosphoryl transfer reaction catalyzed by a cyclin-dependent kinase, CDK2. Our results suggest that an active-site Asp residue, rather than ATP as previously proposed, serves as the general base to activate the Ser nucleophile. The corresponding transition state features a

  3. Advances in social simulation 2015

    CERN Document Server

    Verbrugge, Rineke; Flache, Andreas; Roo, Gert; Hoogduin, Lex; Hemelrijk, Charlotte


    This book highlights recent developments in the field, presented at the Social Simulation 2015 conference in Groningen, The Netherlands. It covers advances both in applications and methods of social simulation. Societal issues addressed range across complexities in economic systems, opinion dynamics and civil violence, changing mobility patterns, different land-use, transition in the energy system, food production and consumption, ecosystem management and historical processes. Methodological developments cover how to use empirical data in validating models in general, formalization of behavioral theory in agent behavior, construction of artificial populations for experimentation, replication of models, and agent-based models that can be run in a web browser. Social simulation is a rapidly evolving field. Social scientists are increasingly interested in social simulation as a tool to tackle the complex non-linear dynamics of society. Furthermore, the software and hardware tools available for social simulation ...

  4. Projective simulation for artificial intelligence (United States)

    Briegel, Hans J.; de Las Cuevas, Gemma


    We propose a model of a learning agent whose interaction with the environment is governed by a simulation-based projection, which allows the agent to project itself into future situations before it takes real action. Projective simulation is based on a random walk through a network of clips, which are elementary patches of episodic memory. The network of clips changes dynamically, both due to new perceptual input and due to certain compositional principles of the simulation process. During simulation, the clips are screened for specific features which trigger factual action of the agent. The scheme is different from other, computational, notions of simulation, and it provides a new element in an embodied cognitive science approach to intelligent action and learning. Our model provides a natural route for generalization to quantum-mechanical operation and connects the fields of reinforcement learning and quantum computation.

  5. Simulation visualization through dynamic instrumentation

    Energy Technology Data Exchange (ETDEWEB)

    Bisset, K.R.


    The goal of the instrument composition system is to allow a simulation user to dynamically create instruments as a simulation executes. Instruments can include graphical displays, data collectors, and debugging aides. Instruments are made up of small building blocks which can be easily combined into larger, more complex instruments. Through the sue of an Attribute Server (a distributed publication/subscription mechanism), the actors and instruments in a simulation can interact without direct knowledge of each other. Instead, each actor publishes the attributes which it has available. An instrument subscribes to the attributes in which it is interested, and is notified whenever the value of one of these attribute changes. An instrument can also publish attributes for use by other instruments. Since the Attribute Server is distributed, the publisher of an attribute need not execute on the same machine as the subscriber. This allows CPU intensive data visualization to execute on separate machines from the simulation, minimizing the impact on the simulation.

  6. Simulation of multivariate diffusion bridges

    DEFF Research Database (Denmark)

    Bladt, Mogens; Finch, Samuel; Sørensen, Michael

    We propose simple methods for multivariate diffusion bridge simulation, which plays a fundamental role in simulation-based likelihood and Bayesian inference for stochastic differential equations. By a novel application of classical coupling methods, the new approach generalizes a previously...... proposed simulation method for one-dimensional bridges to the mulit-variate setting. First a method of simulating approzimate, but often very accurate, diffusion bridges is proposed. These approximate bridges are used as proposal for easily implementable MCMC algorithms that produce exact diffusion bridges....... The new method is much more generally applicable than previous methods. Another advantage is that the new method works well for diffusion bridges in long intervals because the computational complexity of the method is linear in the length of the interval. In a simulation study the new method performs well...

  7. Hardware-Accelerated Simulated Radiography

    Energy Technology Data Exchange (ETDEWEB)

    Laney, D; Callahan, S; Max, N; Silva, C; Langer, S; Frank, R


    We present the application of hardware accelerated volume rendering algorithms to the simulation of radiographs as an aid to scientists designing experiments, validating simulation codes, and understanding experimental data. The techniques presented take advantage of 32-bit floating point texture capabilities to obtain solutions to the radiative transport equation for X-rays. The hardware accelerated solutions are accurate enough to enable scientists to explore the experimental design space with greater efficiency than the methods currently in use. An unsorted hexahedron projection algorithm is presented for curvilinear hexahedral meshes that produces simulated radiographs in the absorption-only regime. A sorted tetrahedral projection algorithm is presented that simulates radiographs of emissive materials. We apply the tetrahedral projection algorithm to the simulation of experimental diagnostics for inertial confinement fusion experiments on a laser at the University of Rochester.

  8. Design education with simulation games

    DEFF Research Database (Denmark)

    Juuti, Tero; Lehtonen, Timo; Hansen, Poul H. Kyvsgård


    " This paper is a report on the use of simulation games in design education. Our objective was to find solution to the question: "How to do design education effectively and efficiently for hundreds of people with minimum resources?" In the paper the learning theories are described in short. Our...... focus is to describe observations and recommendations for people who have similar challenge. In the end we have discussion about the drawbacks of the learning method. Two different simulation games were used; one with university students and another with industrial people. At university quantitative...... data was gathered from exams and the results were analysed. Especially the learning of low grade exam students was impressive when using simulation game. The data from industry is based on observations while using simulation game. The results were that each of the workshop, game, and simulation...

  9. DeepSimulator: a deep simulator for Nanopore sequencing

    KAUST Repository

    Li, Yu


    Motivation: Oxford Nanopore sequencing is a rapidly developed sequencing technology in recent years. To keep pace with the explosion of the downstream data analytical tools, a versatile Nanopore sequencing simulator is needed to complement the experimental data as well as to benchmark those newly developed tools. However, all the currently available simulators are based on simple statistics of the produced reads, which have difficulty in capturing the complex nature of the Nanopore sequencing procedure, the main task of which is the generation of raw electrical current signals. Results: Here we propose a deep learning based simulator, DeepSimulator, to mimic the entire pipeline of Nanopore sequencing. Starting from a given reference genome or assembled contigs, we simulate the electrical current signals by a context-dependent deep learning model, followed by a base-calling procedure to yield simulated reads. This workflow mimics the sequencing procedure more naturally. The thorough experiments performed across four species show that the signals generated by our context-dependent model are more similar to the experimentally obtained signals than the ones generated by the official context-independent pore model. In terms of the simulated reads, we provide a parameter interface to users so that they can obtain the reads with different accuracies ranging from 83% to 97%. The reads generated by the default parameter have almost the same properties as the real data. Two case studies demonstrate the application of DeepSimulator to benefit the development of tools in de novo assembly and in low coverage SNP detection. Availability: The software can be accessed freely at:

  10. Simulation Basics: How to Conduct a High-Fidelity Simulation. (United States)

    Willhaus, Janet


    Well-planned and conducted health care simulation scenarios provide opportunities for staff development in areas such as communication, patient care, and teamwork. Consideration of resources, the location for the training, preparation of learners, and use of either a high-fidelity mannequin or a trained actor (eg, a standardized patient) are all part of the operational attentions needed to conduct a simulation training scenario. In order for participants to meet training objectives, the execution of the simulation session must be both planned and purposeful.

  11. Design of simulation-based medical education and advantages and disadvantages of in situ simulation versus off-site simulation

    NARCIS (Netherlands)

    Sorensen, J.L.; Ostergaard, D.; Leblanc, V.; Ottesen, B.; Konge, L.; Dieckmann, P.; Vleuten, C. van der


    BACKGROUND: Simulation-based medical education (SBME) has traditionally been conducted as off-site simulation in simulation centres. Some hospital departments also provide off-site simulation using in-house training room(s) set up for simulation away from the clinical setting, and these activities

  12. Fast Calorimeter Simulation in ATLAS

    CERN Document Server

    Schaarschmidt, Jana; The ATLAS collaboration


    Producing the very large samples of simulated events required by many physics and performance studies with the ATLAS detector using the full GEANT4 detector simulation is highly CPU intensive. Fast simulation tools are a useful way of reducing CPU requirements when detailed detector simulations are not needed. During the LHC Run-1, a fast calorimeter simulation (FastCaloSim) was successfully used in ATLAS. FastCaloSim provides a simulation of the particle energy response at the calorimeter read-out cell level, taking into account the detailed particle shower shapes and the correlations between the energy depositions in the various calorimeter layers. It is interfaced to the standard ATLAS digitization and reconstruction software, and it can be tuned to data more easily than GEANT4. It is 500 times faster than full simulation in the calorimeter system. Now an improved version of FastCaloSim is in development, incorporating the experience with the version used during Run-1. The new FastCaloSim makes use of mach...

  13. Reversible simulation of irreversible computation (United States)

    Li, Ming; Tromp, John; Vitányi, Paul


    Computer computations are generally irreversible while the laws of physics are reversible. This mismatch is penalized by among other things generating excess thermic entropy in the computation. Computing performance has improved to the extent that efficiency degrades unless all algorithms are executed reversibly, for example by a universal reversible simulation of irreversible computations. All known reversible simulations are either space hungry or time hungry. The leanest method was proposed by Bennett and can be analyzed using a simple ‘reversible’ pebble game. The reachable reversible simulation instantaneous descriptions (pebble configurations) of such pebble games are characterized completely. As a corollary we obtain the reversible simulation by Bennett and, moreover, show that it is a space-optimal pebble game. We also introduce irreversible steps and give a theorem on the tradeoff between the number of allowed irreversible steps and the memory gain in the pebble game. In this resource-bounded setting the limited erasing needs to be performed at precise instants during the simulation. The reversible simulation can be modified so that it is applicable also when the simulated computation time is unknown.

  14. Dynamic fault simulation of wind turbines using commercial simulation tools

    DEFF Research Database (Denmark)

    Lund, Torsten; Eek, Jarle; Uski, Sanna


    This paper compares the commercial simulation tools: PSCAD/EMTDC, PowerFactory, SIMPOW and PSS/E for analysing fault sequences defined in the Danish grid code requirements for wind turbines connected to a voltage level below 100 kV. Both symmetrical and unsymmetrical faults are analysed. The devi......This paper compares the commercial simulation tools: PSCAD/EMTDC, PowerFactory, SIMPOW and PSS/E for analysing fault sequences defined in the Danish grid code requirements for wind turbines connected to a voltage level below 100 kV. Both symmetrical and unsymmetrical faults are analysed....... The deviations and the reasons for the deviations between the tools are stated. The simulation models are imple-mented using the built-in library components of the simulation tools with exception of the mechanical drive-train model, which had to be user-modeled in PowerFactory and PSS/E....

  15. BEST: Biochemical Engineering Simulation Technology

    Energy Technology Data Exchange (ETDEWEB)


    The idea of developing a process simulator that can describe biochemical engineering (a relatively new technology area) was formulated at the National Renewable Energy Laboratory (NREL) during the late 1980s. The initial plan was to build a consortium of industrial and U.S. Department of Energy (DOE) partners to enhance a commercial simulator with biochemical unit operations. DOE supported this effort; however, before the consortium was established, the process simulator industry changed considerably. Work on the first phase of implementing various fermentation reactors into the chemical process simulator, ASPEN/SP-BEST, is complete. This report will focus on those developments. Simulation Sciences, Inc. (SimSci) no longer supports ASPEN/SP, and Aspen Technology, Inc. (AspenTech) has developed an add-on to its ASPEN PLUS (also called BioProcess Simulator [BPS]). This report will also explain the similarities and differences between BEST and BPS. ASPEN, developed by the Massachusetts Institute of Technology for DOE in the late 1970s, is still the state-of-the-art chemical process simulator. It was selected as the only simulator with the potential to be easily expanded into the biochemical area. ASPEN/SP, commercially sold by SimSci, was selected for the BEST work. SimSci completed work on batch, fed-batch, and continuous fermentation reactors in 1993, just as it announced it would no longer commercially support the complete ASPEN/SP product. BEST was left without a basic support program. Luckily, during this same time frame, AspenTech was developing a biochemical simulator with its version of ASPEN (ASPEN PLUS), which incorporates most BEST concepts. The future of BEST will involve developing physical property data and models appropriate to biochemical systems that are necessary for good biochemical process design.

  16. Simulator Sickness in the AH-1S (Cobra) Flight Simulator (United States)


    USAARL Report No. 89-20 N I Simulator Sickness in the AH-1S (Cobra) Flight Simulator By Daniel W. Gower, Jr. Biodynamics Research Division and...adhered to AR 70-25 and USAMRDC Reg 70-25 on Use of Volunteers in Research. Reviewed: DANIEL WGOEJR. LTC, MS Director, Biodynamics search Division Re...Bus Trips------------------------------ $ wines Hammock.%---------------- - Gymnastic Aparatus-------------------------- Roller/Ice Skatinz Elevators

  17. Stochastic modeling analysis and simulation

    CERN Document Server

    Nelson, Barry L


    A coherent introduction to the techniques for modeling dynamic stochastic systems, this volume also offers a guide to the mathematical, numerical, and simulation tools of systems analysis. Suitable for advanced undergraduates and graduate-level industrial engineers and management science majors, it proposes modeling systems in terms of their simulation, regardless of whether simulation is employed for analysis. Beginning with a view of the conditions that permit a mathematical-numerical analysis, the text explores Poisson and renewal processes, Markov chains in discrete and continuous time, se

  18. Rainfall simulation for environmental application

    Energy Technology Data Exchange (ETDEWEB)

    Shriner, D.S.; Abner, C.H.; Mann, L.K.


    Rain simulation systems have been designed for field and greenhouse studies which have the capability of reproducing the physical and chemical characteristics of natural rainfall. The systems permit the simulation of variations in rainfall and droplet size similar to that of natural precipitation. The systems are completely automatic and programmable, allowing unattended operation for periods of up to one week, and have been used to expose not only vegetation but also soils and engineering materials, making them versatile tools for studies involving simulated precipitation.

  19. GNS3 network simulation guide

    CERN Document Server

    Welsh, Chris


    GNS3 Network Simulation Guide is an easy-to-follow yet comprehensive guide which is written in a tutorial format helping you grasp all the things you need for accomplishing your certification or simulation goal. If you are a networking professional who wants to learn how to simulate networks using GNS3, this book is ideal for you. The introductory examples within the book only require minimal networking knowledge, but as the book progresses onto more advanced topics, users will require knowledge of TCP/IP and routing.

  20. Visualization and Simulation in Scheduling

    Directory of Open Access Journals (Sweden)

    R. Čapek


    Full Text Available This paper deals with the representation of scheduling results and it introduces a new tool for visualization and simulation in time scheduling called VISIS. The purpose of this tool is to provide an environment for visualization, e.g. in production line scheduling. The simulation also proposes a way to simulate the influence of a schedule on a user defined system, e.g. for designing filters in digital signal processing. VISIS arises from representing scheduling results using the well-known Gantt chart. The application is implemented in the Matlab programming environment using Simulink and the Virtual Reality toolbox. 

  1. Thermal Kinetics of Glass Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Corrales, Louis R.; Du, Jincheng


    Different glass quenching algorithms are used to create simulated silica glass and their effect on the final glass structure is determined. The most distinct changes are seen to occur in the medium-range structure, specifically in the population of the different ring sizes. Some differences in the number of defects formed are also observed. The implications are that modified glass forming algorithms create glasses that are at least as good as traditional simulated glass forming methods. The objective of using modified glass forming algorithms are to understand quenching rates of simulations in comparison to quenching rates of macroscopic real systems.

  2. Simulation of a cellular automat with an oriented bootstrap rule (United States)

    Duarte, J. A. M. S.


    The evolution of a cellular automat with a culling or bootstrap condition on the minimum number of neighbours for survival has been simulated. The introduction of an orientational constraint converts the lattice from isotropic to semidirected. Simulations of systems of up to 230 million sites are found to be compatible with a threshold value of p=0.966±0.01.

  3. Simulating Others' Realities: Insiders Reflect on Disability Simulations. (United States)

    Leo, Jennifer; Goodwin, Donna


    The purpose of this interpretative phenomenological analysis study was to explore the meaning persons who experience disability ascribed to disability simulations as a pedagogical tool. Reflective writing, one-on-one interviews, and field notes were used to gather information on disability simulation use in a required postsecondary kinesiology course. Seven people who use wheelchairs full time (3 men, 4 women), ranging in age from 28 to 44 yr (average age = 36) shared their perspectives. The thematic analysis revealed 3 themes. The theme "Disability Mentors Required" revealed the participants' collective questioning of their absence from the design and implementation of disability simulations. "Life Is Not a Simulation" illustrated the juxtaposition of disability reality and disability simulations. "Why Are They Laughing?" contrasted the use of fun as a strategy to engage students against the risk of distracting them from deeper reflection. Through the lens of ableism, the importance of disability representation in the development and implementation of disability simulations was affirmed as a means to deepen pedagogical reflexiveness of their intended use.

  4. The effect of alginate and chitosan concentrations on some properties of chitosan-coated alginate beads and survivability of encapsulated Lactobacillus rhamnosus in simulated gastrointestinal conditions and during heat processing. (United States)

    Abbaszadeh, Sepideh; Gandomi, Hassan; Misaghi, Ali; Bokaei, Saeid; Noori, Negin


    In this study, chitosan-coated alginate beads were produced with different concentrations of chitosan and alginate to evaluate the survival of encapsulated Lactobacillus rhamnosus GG during exposure to adverse conditions in gastrointestinal simulated juice and heat processing. The encapsulation yield of different encapsulation treatments was between 25 and 53.2%. Although there was a drastic decrease in pH within 48 h of incubation in MRS medium inoculated with free and encapsulated bacteria, no significant changes (P > 0.05) in bacterial count were observed among different encapsulation treatments. Moreover, the survival rate after gastrointestinal juice exposure of all prepared beads was 10-87 times greater than that of free cells and was significantly enhanced by increasing chitosan and alginate concentrations. The encapsulated bacteria survived significantly (P alginate/10 g L(-1) chitosan-encapsulated L. rhamnosus was reduced by only 2.55 log cycles. Encapsulation effectively protected L. rhamnosus against heat treatment and gastrointestinal conditions, and this effect is important in delivering sufficient numbers of viable probiotic bacteria to the gastrointestinal tract. © 2013 Society of Chemical Industry.

  5. Design of simulation-based medical education and advantages and disadvantages of in situ simulation versus off-site simulation

    DEFF Research Database (Denmark)

    Sørensen, Jette Led; Østergaard, Doris; LeBlanc, Vicki


    BACKGROUND: Simulation-based medical education (SBME) has traditionally been conducted as off-site simulation in simulation centres. Some hospital departments also provide off-site simulation using in-house training room(s) set up for simulation away from the clinical setting, and these activities...... simulations. DISCUSSION: Non-randomised studies argue that in situ simulation is more effective for educational purposes than other types of simulation settings. Conversely, the few comparison studies that exist, either randomised or retrospective, show that choice of setting does not seem to influence...... individual or team learning. However, hospital department-based simulations, such as in-house simulation and in situ simulation, lead to a gain in organisational learning. To our knowledge no studies have compared announced and unannounced in situ simulation. The literature suggests some improved...

  6. Adaptive Sampling in Hierarchical Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Knap, J; Barton, N R; Hornung, R D; Arsenlis, A; Becker, R; Jefferson, D R


    We propose an adaptive sampling methodology for hierarchical multi-scale simulation. The method utilizes a moving kriging interpolation to significantly reduce the number of evaluations of finer-scale response functions to provide essential constitutive information to a coarser-scale simulation model. The underlying interpolation scheme is unstructured and adaptive to handle the transient nature of a simulation. To handle the dynamic construction and searching of a potentially large set of finer-scale response data, we employ a dynamic metric tree database. We study the performance of our adaptive sampling methodology for a two-level multi-scale model involving a coarse-scale finite element simulation and a finer-scale crystal plasticity based constitutive law.

  7. Diving and Environmental Simulation Team (United States)

    Federal Laboratory Consortium — The Diving and Environmental Simulation Team focuses on ways to optimize the performance and safety of Navy divers. Our goal is to increase mission effectiveness by...

  8. Approximate simulation of Hawkes processes

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl


    Hawkes processes are important in point process theory and its applications, and simulation of such processes are often needed for various statistical purposes. This article concerns a simulation algorithm for unmarked and marked Hawkes processes, exploiting that the process can be constructed...... as a Poisson cluster process. The algorithm suffers from edge effects but is much faster than the perfect simulation algorithm introduced in our previous work Møller and Rasmussen (2004). We derive various useful measures for the error committed when using the algorithm, and we discuss various empirical...... results for the algorithm compared with perfect simulations. Extensions of the algorithm and the results to more general types of marked point processes are also discussed....

  9. Electronic Concepts Simulation Research Facility (United States)

    Federal Laboratory Consortium — The laboratory utilizes state-of-the-art digital models and simulations of both friendly and enemy airborne and ground-based weapon and command and control systems....


    Directory of Open Access Journals (Sweden)



    Full Text Available Nowadays, grace of computing possibilities that electronic computers offer and namely, big memory volume and computing speed, there is the improving of modeling methods, an important role having complex system modeling using simulation techniques. These o

  11. Robotic Vehicle Proxy Simulation Project (United States)

    National Aeronautics and Space Administration — Energid Technologies proposes the development of a digital simulation to replace robotic vehicles in field studies. It will model the dynamics, terrain interaction,...

  12. Multidiscipline simulation of elastic manipulators

    Directory of Open Access Journals (Sweden)

    T. Rølvåg


    Full Text Available This paper contributes to multidiscipline simulation of elastic robot manipulators in FEDEM. All developments presented in this paper are based on the formulations in FEDEM, a simulation system developed by the authors which combines finite element, mechanism and control analysis. In order to establish this general simulation system as an efficient multidiscipline robot design tool a robot control system including a high level robot programming language, interpolation algorithms, path generation algorithms, forward and inverse kinematics, control systems, gear and transmission models are implemented. These new features provide a high level of integration between traditionally separate design disciplines from the very beginning of the design and optimization process. Several simulations have shown that high fidelity mathematical models can be derived and used as a basis for dynamic analysis and controller design in FEDEM.

  13. Airline Operations Center Simulation Project (United States)

    National Aeronautics and Space Administration — The NASA Airspace Systems Program (ASP) uses a large suite of models, simulations, and laboratories to develop and assess new ATM concepts and technologies. Most of...

  14. Intelligent Tools and Instructional Simulations

    National Research Council Canada - National Science Library

    Murray, William R; Sams, Michelle; Belleville, Michael


    This intelligent tools and instructional simulations project was an investigation into the utility of a knowledge-based performance support system to support learning and on-task performance for using...

  15. Network Simulation of Technical Architecture

    National Research Council Canada - National Science Library

    Cave, William


    ..., and development of the Army Battle Command System (ABCS). PSI delivered a hierarchical iconic modeling facility that can be used to structure and restructure both models and scenarios, interactively, while simulations are running...

  16. Nuclear Power Plant Simulation Game. (United States)

    Weiss, Fran


    Presents a nuclear power plant simulation game which is designed to involve a class of 30 junior or senior high school students. Scientific, ecological, and social issues covered in the game are also presented. (HM)

  17. Simulating the Commander's Decision Process

    National Research Council Canada - National Science Library

    Kovalchik, Joseph G; Labin, Jonathan W; Rosenlof, Eric R


    ... * Commander Federate simulates the human decision process by employing -- A fuzzy expert system to set warfare priorities either by time or event and provides inter-warfare area conflict resolution...

  18. Evolutionary Games and Computer Simulations

    CERN Document Server

    Huberman, B A; Huberman, Bernardo A.; Glance, Natalie S.


    Abstract: The prisoner's dilemma has long been considered the paradigm for studying the emergence of cooperation among selfish individuals. Because of its importance, it has been studied through computer experiments as well as in the laboratory and by analytical means. However, there are important differences between the way a system composed of many interacting elements is simulated by a digital machine and the manner in which it behaves when studied in real experiments. In some instances, these disparities can be marked enough so as to cast doubt on the implications of cellular automata type simulations for the study of cooperation in social systems. In particular, if such a simulation imposes space-time granularity, then its ability to describe the real world may be compromised. Indeed, we show that the results of digital simulations regarding territoriality and cooperation differ greatly when time is discrete as opposed to continuous.

  19. Upgrades for the CMS simulation (United States)

    Hildreth, M.; Ivanchenko, V. N.; Lange, D. J.; CMS Collaboration


    We report the current status of the full simulation application developed by the CMS experiment. For LHC run-II, CMS is using Geant4 10.0p02 built in sequential mode. About 16 billion events were produced for run-II analysis during 2015-2016. A new method to handle pileup events has been developed and is now used for regular processing of simulation events. We plan to use Geant4 10.2p02 for 2017 production. In this work, we present CPU and memory performance of the CMS full simulation for different configurations and Geant4 versions considered during our testing. We also discuss technical aspects of the migration to Geant4 10.2 and a new premixing scheme for the simulation of pileup.

  20. Surgical Simulator Design and Development

    NARCIS (Netherlands)

    Dankelman, J.


    With the introduction of minimally invasive surgery (MIS), it became necessary to develop training methods to learn skills outside the operating room. Several training simulators have become commercially available, but fundamental research into the requirements for effective and efficient training

  1. Simulation systems: design and applications

    Directory of Open Access Journals (Sweden)

    Liudmila Burtseva


    Full Text Available In this paper the history of Simulation System Group investigations is presented. Some important achievements in past and present time are marked. The directions of future investigations are discussed in the fourth section of the paper.

  2. Distributed Air Traffic Control Simulator

    Directory of Open Access Journals (Sweden)

    R. Radovanović


    Full Text Available During initial training air traffic control students acquire theoretical knowledge in various fields including air traffic management, aircraft performance, air traffic control equipment and systems, navigation and others. This paper proposes a simulator and explains its use and features that allows students to gain a practical insight into their coursework in order to complement their training. The goal of the simulator is to realistically implement all the key functionalities needed to cover the topics that were presented in class. The simulator offers a user friendly, distributed, and multi-role environment that can be deployed on regular PCs. Moreover, this paper discusses and resolves some of the main conceptual and implementational issues that were faced during simulator development.

  3. A novel home laparoscopic simulator. (United States)

    Al-Abed, Yahya; Cooper, David G


    As laparoscopic surgery becomes increasingly accepted as the technique of choice for many procedures, changes in training structure and working practice limit opportunities for trainees to acquire these new skills. A solution to this problem is the development of simulators that help to develop and hone skills before exposure to the operating theater. Several excellent yet costly simulators exist that have been demonstrated to improve laparoscopic skills. Furthermore, several reports in the literature describe the development of "home simulators"; however, each of these has limitations. The development of a home laparoscopic simulator is reported here that is cheap and easy to build and incorporates an extra dimension of practical port insertion as well as a novel design for a mobile light and camera source.

  4. Simulation Package based on Placet

    CERN Document Server

    D'Amico, T E; Leros, Nicolas; Schulte, Daniel


    The program PLACET is used to simulate transverse and longitudinal beam effects in the main linac, the drive-beam accelerator and the drive-beam decelerators of CLIC, as well as in the linac of CTF3. It provides different models of accelerating and decelerating structures, linear optics and thin multipoles. Several methods of beam-based alignment, including emittance tuning bumps and feedback, and different failure modes can be simulated. An interface to the beam-beam simulation code GUINEA-PIG exists. Currently, interfaces to MAD and TRANSPORT are under development and an extension to transfer lines and bunch compressors is also being made. In the future, the simulations will need to be performed by many users, which requires a simplified user interface. The paper describes the status of PLACET and plans for the futur

  5. Design of simulation-based medical education and advantages and disadvantages of in situ simulation versus off-site simulation


    Sorensen, J.L.; Ostergaard, D.; Leblanc, V.; Ottesen, B; Konge, L; Dieckmann, P; Vleuten, C. van der


    BACKGROUND: Simulation-based medical education (SBME) has traditionally been conducted as off-site simulation in simulation centres. Some hospital departments also provide off-site simulation using in-house training room(s) set up for simulation away from the clinical setting, and these activities are called in-house training. In-house training facilities can be part of hospital departments and resemble to some extent simulation centres but often have less technical equipment. In situ simulat...

  6. AESS: Accelerated Exact Stochastic Simulation (United States)

    Jenkins, David D.; Peterson, Gregory D.


    The Stochastic Simulation Algorithm (SSA) developed by Gillespie provides a powerful mechanism for exploring the behavior of chemical systems with small species populations or with important noise contributions. Gene circuit simulations for systems biology commonly employ the SSA method, as do ecological applications. This algorithm tends to be computationally expensive, so researchers seek an efficient implementation of SSA. In this program package, the Accelerated Exact Stochastic Simulation Algorithm (AESS) contains optimized implementations of Gillespie's SSA that improve the performance of individual simulation runs or ensembles of simulations used for sweeping parameters or to provide statistically significant results. Program summaryProgram title: AESS Catalogue identifier: AEJW_v1_0 Program summary URL: Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: University of Tennessee copyright agreement No. of lines in distributed program, including test data, etc.: 10 861 No. of bytes in distributed program, including test data, etc.: 394 631 Distribution format: tar.gz Programming language: C for processors, CUDA for NVIDIA GPUs Computer: Developed and tested on various x86 computers and NVIDIA C1060 Tesla and GTX 480 Fermi GPUs. The system targets x86 workstations, optionally with multicore processors or NVIDIA GPUs as accelerators. Operating system: Tested under Ubuntu Linux OS and CentOS 5.5 Linux OS Classification: 3, 16.12 Nature of problem: Simulation of chemical systems, particularly with low species populations, can be accurately performed using Gillespie's method of stochastic simulation. Numerous variations on the original stochastic simulation algorithm have been developed, including approaches that produce results with statistics that exactly match the chemical master equation (CME) as well as other approaches that approximate the CME. Solution

  7. Biomedical Applications of Simulated Environments .


    W. Selvamurthy


    Environmental physiology assumes great significance in our national context of the diverse climatic conditions prevailing in different regions. Troops have to operate in diverse environmental conditions guarding the frontiers. Hence, the research in this area has been focused on the usage of field studies in the natural environments or simulated environments in the laboratory. Besides, the application of the simulation chambers in the research on the physiological effects of diverse en...

  8. Medical Simulations for Exploration Medicine (United States)

    Reyes, David; Suresh, Rahul; Pavela, James; Urbina, Michelle; Mindock, Jennifer; Antonsen, Erik


    Medical simulation is a useful tool that can be used to train personnel, develop medical processes, and assist cross-disciplinary communication. Medical simulations have been used in the past at NASA for these purposes, however they are usually created ad hoc. A stepwise approach to scenario development has not previously been used. The NASA Exploration Medical Capability (ExMC) created a medical scenario development tool to test medical procedures, technologies, concepts of operation and for use in systems engineering (SE) processes.

  9. Aircraft ditching loads simulation tool


    Bonanni, A.; Vandewaeter, L.; Havill, C.; Kanyoo, P.; Taunton, D.J.; Blake, J.I.R.; Cropper, E.; Hancock, S.


    The present work presents a novel methodology developed for calculating the steady loads acting on aircraft structures in the event of ditching in water. It represents the preliminary result of Stirling Dynamics as part of a NATEP research project. The overall objective of the project is to expand the capabilities of the Stirling Dynamics proprietary software SD-GLOAD (originally designed for ground and crash loads dynamic simulations) to aircraft ditching simulations. The methodology present...

  10. Patient Simulators Train Emergency Caregivers (United States)


    Johnson Space Center teamed up with Sarasota, Florida-based METI (now CAE Healthcare) through the STTR program to ruggedize the company’s patient simulators for training astronauts in microgravity environments. The design modifications were implemented in future patient simulators that are now used to train first responders in the US military as well as fire departments and other agencies that work in disaster zones.

  11. TREAT Modeling and Simulation Strategy

    Energy Technology Data Exchange (ETDEWEB)

    DeHart, Mark David [Idaho National Lab. (INL), Idaho Falls, ID (United States)


    This report summarizes a four-phase process used to describe the strategy in developing modeling and simulation software for the Transient Reactor Test Facility. The four phases of this research and development task are identified as (1) full core transient calculations with feedback, (2) experiment modeling, (3) full core plus experiment simulation and (4) quality assurance. The document describes the four phases, the relationship between these research phases, and anticipated needs within each phase.

  12. Simulation and Non-Simulation Based Human Reliability Analysis Approaches

    Energy Technology Data Exchange (ETDEWEB)

    Boring, Ronald Laurids [Idaho National Lab. (INL), Idaho Falls, ID (United States); Shirley, Rachel Elizabeth [Idaho National Lab. (INL), Idaho Falls, ID (United States); Joe, Jeffrey Clark [Idaho National Lab. (INL), Idaho Falls, ID (United States); Mandelli, Diego [Idaho National Lab. (INL), Idaho Falls, ID (United States)


    Part of the U.S. Department of Energy’s Light Water Reactor Sustainability (LWRS) Program, the Risk-Informed Safety Margin Characterization (RISMC) Pathway develops approaches to estimating and managing safety margins. RISMC simulations pair deterministic plant physics models with probabilistic risk models. As human interactions are an essential element of plant risk, it is necessary to integrate human actions into the RISMC risk model. In this report, we review simulation-based and non-simulation-based human reliability assessment (HRA) methods. Chapter 2 surveys non-simulation-based HRA methods. Conventional HRA methods target static Probabilistic Risk Assessments for Level 1 events. These methods would require significant modification for use in dynamic simulation of Level 2 and Level 3 events. Chapter 3 is a review of human performance models. A variety of methods and models simulate dynamic human performance; however, most of these human performance models were developed outside the risk domain and have not been used for HRA. The exception is the ADS-IDAC model, which can be thought of as a virtual operator program. This model is resource-intensive but provides a detailed model of every operator action in a given scenario, along with models of numerous factors that can influence operator performance. Finally, Chapter 4 reviews the treatment of timing of operator actions in HRA methods. This chapter is an example of one of the critical gaps between existing HRA methods and the needs of dynamic HRA. This report summarizes the foundational information needed to develop a feasible approach to modeling human interactions in the RISMC simulations.

  13. Dynamic simulation of DH house substations. Simulation models

    Energy Technology Data Exchange (ETDEWEB)

    Thorsen, J.E. [Danfoss A/S, Nordborg (Denmark). Building Control Division


    Danfoss AS proceeds on developing simulation models of HVAC components including control equipment for district heating systems. The author presents an example of a simulated domestic hot water service station, describes some of the model components and shows the link between mathematical model and simulation model. Furthermore, an example of hardware in the loop simulation is presented. In this case a domestic heating system is built up in the laboratory by hardware components connected with real time simulations. This system forms the basis for test and evaluation of new control strategies. (orig.) [German] Danfoss AS, Nordborg/Daenemark, entwickelt Simulationsmodelle fuer Komponenten im Bereich Heizung/Lueftung/Klimatechnik einschliesslich der Regelungssysteme fuer Fernwaermeanlagen. Der Autor stellt das Simulationsmodell fuer einen Warmwassererwaermer dar. Darueber hinaus wird das Beispiel einer Simulation unter Einbeziehung von realen Komponenten beschrieben. Dabei wurde im Labor eine Heizanlage aufgebaut und an ein Echtzeit-Simulationsprogramm angeschlossen. Dieses System bildet die Grundlage fuer die Erprobung und Evaluierung neuer Regelungsstrategien. In den letzten 10 Jahren hat Danfoss mit dem Einsatz dynamischer Simulationen bei der Entwicklung von Regelungssystemen fuer Fernwaermeanlagen positive Erfahrungen gesammelt. Es hat sich gezeigt, dass die Simulation erfolgreich eingesetzt werden kann, und zwar nicht nur zur Erprobung besonderer Entwicklungsvorschlaege. Ebenso wichtig war es, Informationen und ein besseres Verstaendnis der Wechselbeziehungen zwischen verschiedenen Parametern zu gewinnen, die das Funktionieren einer Heizungs- oder Heisswasseranlage beeinflussen. Danfoss richtet zur Zeit ein Zentrum fuer die Anwendung von Gebaeudeautomatisierungssystemen ein. Dieses Zentrum wird Moeglichkeiten zur Fortbildung und praktischen Erfahrung auf dem Gebiet der Heizungs- Lueftungs- und Klimatechnik bieten. Die Simulationsprogramme werden einen

  14. Skin simulators for dermatological procedures. (United States)

    Wang, Xiaojie; Albahrani, Yasser; Pan, Michael; Levitt, Jacob


    A variety of skin simulators are available on which to practice procedures; however, choice of a suboptimal substitute compromises realism and productive practice. Skin simulators for basic dermatological procedures are reviewed. The authors' anecdotal experience with various skin simulators for different procedures is shared. The following simulators are suggested:  an unripe banana for elliptical excision, pork belly for undermining, pork belly for simple interrupted and buried suture, capped needle on a human shoulder for intramuscular injection, ripe tomato or hotdog with skin for intradermal injection, eggplant for shave biopsy, pork belly for punch biopsy, plastic tape over a dark surface for cryosurgery, and beef liver for electrosurgery.  Flaps are best practiced with foam sandwiched between foam tape or artificial anatomical models created specifically for this purpose. The utility of one simulator over another was not compared in a controlled study. Efficient, realistic skin simulators are readily available for practice, which should enhance the safety of the practitioner and improve outcomes of novices.

  15. Innovative simulation strategies in education. (United States)

    Aebersold, Michelle; Tschannen, Dana; Bathish, Melissa


    The use of simulation in the undergraduate nursing curriculum is gaining popularity and is becoming a foundation of many nursing programs. The purpose of this paper is to highlight a new simulation teaching strategy, virtual reality (VR) simulation, which capitalizes on the technological skills of the new generation student. This small-scale pilot study focused on improving interpersonal skills in senior level nursing students using VR simulation. In this study, a repeated-measure design was used to evaluate the effectiveness of VR simulation on improving student's performance over a series of two VR scenarios. Using the Emergency Medicine Crisis Resource Management (EMCRM) tool, student performance was evaluated. Overall, the total EMCRM score improved but not significantly. The subscale areas of communication (P = .047, 95% CI: - 1.06, -.007) and professional behavior (P = .003, 95% CI: - 1.12, -.303) did show a significant improvement between the two scenario exposures. Findings from this study show the potential for virtual reality simulations to have an impact on nursing student performance.

  16. Innovative Simulation Strategies in Education

    Directory of Open Access Journals (Sweden)

    Michelle Aebersold


    Full Text Available The use of simulation in the undergraduate nursing curriculum is gaining popularity and is becoming a foundation of many nursing programs. The purpose of this paper is to highlight a new simulation teaching strategy, virtual reality (VR simulation, which capitalizes on the technological skills of the new generation student. This small-scale pilot study focused on improving interpersonal skills in senior level nursing students using VR simulation. In this study, a repeated-measure design was used to evaluate the effectiveness of VR simulation on improving student’s performance over a series of two VR scenarios. Using the Emergency Medicine Crisis Resource Management (EMCRM tool, student performance was evaluated. Overall, the total EMCRM score improved but not significantly. The subscale areas of communication (P=.047, 95% CI:−1.06,−.007 and professional behavior (P=.003, 95% CI:−1.12,−.303 did show a significant improvement between the two scenario exposures. Findings from this study show the potential for virtual reality simulations to have an impact on nursing student performance.

  17. Upgrading ATLAS Fast Calorimeter Simulation

    CERN Document Server

    Heath, Matthew Peter; The ATLAS collaboration


    Producing the very large samples of simulated events required by many physics and performance studies with the ATLAS detector using the full GEANT4 detector simulation is highly CPU intensive. Fast simulation tools are a useful way of reducing CPU requirements when detailed detector simulations are not needed. During the LHC Run-1, a fast calorimeter simulation (FastCaloSim) was successfully used in ATLAS. FastCaloSim provides a simulation of the particle energy response at the calorimeter read-out cell level, taking into account the detailed particle shower shapes and the correlations between the energy depositions in the various calorimeter layers. It is interfaced to the standard ATLAS digitization and reconstruction software, and it can be tuned to data more easily than Geant4. Now an improved version of FastCaloSim is in development, incorporating the experience with the version used during Run-1. The new FastCaloSim aims to overcome some limitations of the first version by improving the description of s...

  18. Modeling and Simulation at NASA (United States)

    Steele, Martin J.


    This slide presentation is composed of two topics. The first reviews the use of modeling and simulation (M&S) particularly as it relates to the Constellation program and discrete event simulation (DES). DES is defined as a process and system analysis, through time-based and resource constrained probabilistic simulation models, that provide insight into operation system performance. The DES shows that the cycles for a launch from manufacturing and assembly to launch and recovery is about 45 days and that approximately 4 launches per year are practicable. The second topic reviews a NASA Standard for Modeling and Simulation. The Columbia Accident Investigation Board made some recommendations related to models and simulations. Some of the ideas inherent in the new standard are the documentation of M&S activities, an assessment of the credibility, and reporting to decision makers, which should include the analysis of the results, a statement as to the uncertainty in the results,and the credibility of the results. There is also discussion about verification and validation (V&V) of models. There is also discussion about the different types of models and simulation.

  19. Automated Knowledge Discovery From Simulators (United States)

    Burl, Michael; DeCoste, Dennis; Mazzoni, Dominic; Scharenbroich, Lucas; Enke, Brian; Merline, William


    A computational method, SimLearn, has been devised to facilitate efficient knowledge discovery from simulators. Simulators are complex computer programs used in science and engineering to model diverse phenomena such as fluid flow, gravitational interactions, coupled mechanical systems, and nuclear, chemical, and biological processes. SimLearn uses active-learning techniques to efficiently address the "landscape characterization problem." In particular, SimLearn tries to determine which regions in "input space" lead to a given output from the simulator, where "input space" refers to an abstraction of all the variables going into the simulator, e.g., initial conditions, parameters, and interaction equations. Landscape characterization can be viewed as an attempt to invert the forward mapping of the simulator and recover the inputs that produce a particular output. Given that a single simulation run can take days or weeks to complete even on a large computing cluster, SimLearn attempts to reduce costs by reducing the number of simulations needed to effect discoveries. Unlike conventional data-mining methods that are applied to static predefined datasets, SimLearn involves an iterative process in which a most informative dataset is constructed dynamically by using the simulator as an oracle. On each iteration, the algorithm models the knowledge it has gained through previous simulation trials and then chooses which simulation trials to run next. Running these trials through the simulator produces new data in the form of input-output pairs. The overall process is embodied in an algorithm that combines support vector machines (SVMs) with active learning. SVMs use learning from examples (the examples are the input-output pairs generated by running the simulator) and a principle called maximum margin to derive predictors that generalize well to new inputs. In SimLearn, the SVM plays the role of modeling the knowledge that has been gained through previous simulation trials

  20. Understanding molecular simulation: from algorithms to applications

    NARCIS (Netherlands)

    Frenkel, D.; Smit, B.


    Second and revised edition Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the "recipes" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique

  1. Survival or growth of inoculated Escherichia coli O157:H7 and Salmonella on yellow onions (Allium cepa) under conditions simulating food service and consumer handling and storage. (United States)

    Lieberman, Vanessa M; Zhao, Irene Y; Schaffner, Donald W; Danyluk, Michelle D; Harris, Linda J


    Whole and diced yellow onions (Allium cepa) were inoculated with five-strain cocktails of rifampin-resistant Escherichia coli O157:H7 or Salmonella and stored under conditions to simulate food service or consumer handling. The inoculum was grown in broth (for both whole and diced onion experiments) or on agar plates (for whole onion experiments). Marked circles (3.3 cm in diameter) on the outer papery skin of whole onions were spot inoculated (10 μl in 10 drops) at 7 log CFU per circle, and onions were stored at 4°C, 30 to 50 % relative humidity, or at ambient conditions (23°C, 30 to 50 % relative humidity). Diced onions were inoculated at 3 log CFU/g and then stored in open or closed containers at 4°C or ambient conditions. Previously inoculated and ambient-stored diced onions were also mixed 1:9 (wt/wt) with refrigerated uninoculated freshly diced onions and stored in closed containers at ambient conditions. Inoculated pathogens were recovered in 0.1 % peptone and plated onto selective and nonselective media supplemented with 50 μg/ml rifampin. Both E. coli O157:H7 and Salmonella populations declined more rapidly on onion skins when the inoculum was prepared in broth rather than on agar. Agar-prepared E. coli O157:H7 and Salmonella declined by 0.4 and 0.3 log CFU per sample per day, respectively, at ambient conditions; at 4°C the rates of reduction were 0.08 and 0.06 log CFU per sample per day for E. coli O157:H7 and Salmonella, respectively. Populations of E. coli O157:H7 and Salmonella did not change over 6 days of storage at 4°C in diced onions. Lag times of 6 to 9 h were observed with freshly inoculated onion at ambient conditions; no lag was observed when previously inoculated and uninoculated onions were mixed. Growth rates at ambient conditions were 0.2 to 0.3 log CFU/g/h for E. coli O157:H7 and Salmonella in freshly inoculated onion and 0.2 log CFU/g/h in mixed product. Diced onions support pathogen growth and should be kept refrigerated.

  2. Survival of Listeria monocytogenes in simulated gastrointestinal system and transcriptional profiling of stress- and adhesion-related genes

    DEFF Research Database (Denmark)

    Jiang, Lingli; Olesen, Inger; Andersen, Thomas


    survival of L. monocytogenes serotypes 4b and 1=2a strains were higher than that of serotype 1=2c, suggesting that pathogenicity might be related to the viability in the gastrointestinal tract.The transcription levels of prfA and the general stress-related genes clpC, clpE, and clpP were upregulated...

  3. Growth and survival of Salmonella Paratyphi A in roasted marinated chicken during refrigerated storage: Effect of temperature abuse and computer simulation for cold chain management (United States)

    This research was conducted to evaluate the feasibility of using a one-step dynamic numerical analysis and optimization method to directly construct a tertiary model to describe the growth and survival of Salmonella Paratyphi A (SPA) in a marinated roasted chicken product. Multiple dynamic growth a...

  4. Simulation of aperiodic bipedal sprinting. (United States)

    Celik, Huseyin; Piazza, Stephen J


    Synthesis of legged locomotion through dynamic simulation is useful for exploration of the mechanical and control variables that contribute to efficient gait. Most previous simulations have made use of periodicity constraints, a sensible choice for investigations of steady-state walking or running. Sprinting from rest, however, is aperiodic by nature and this aperiodicity is central to the goal of the movement, as performance is determined in large part by a rapid acceleration phase early in the race. The purpose of this study was to create a novel simulation of aperiodic sprinting using a modified spring-loaded inverted pendulum (SLIP) biped model. The optimal control problem was to find the set of controls that minimized the time for the model to run 20 m, and this problem was solved using a direct multiple shooting algorithm that converts the original continuous time problem into piecewise discrete subproblems. The resulting nonlinear programming problem was solved iteratively using a sequential quadratic programming method. The starting point for the optimizer was an initial guess simulation that was a slow alternating-gait "jogging" simulation developed using proportional-derivative feedback to control trunk attitude, swing leg angle, and leg retraction and extension. The optimized aperiodic sprint simulation solution yielded a substantial improvement in locomotion time over the initial guess (2.79 s versus 6.64 s). Following optimization, the model produced forward impulses at the start of the sprint that were four times greater than those of the initial guess simulation, producing more rapid acceleration. Several gait features demonstrated in the optimized sprint simulation correspond to behaviors of human sprinters: forward trunk lean at the start; straightening of the trunk during acceleration; and a dive at the finish. Optimization resulted in reduced foot contact times (0.065 s versus 0.210 s), but contact times early in the optimized

  5. Simulated consultations: a sociolinguistic perspective. (United States)

    Atkins, Sarah; Roberts, Celia; Hawthorne, Kamila; Greenhalgh, Trisha


    Assessment of consulting skills using simulated patients is widespread in medical education. Most research into such assessment is sited in a statistical paradigm that focuses on psychometric properties or replicability of such tests. Equally important, but less researched, is the question of how far consultations with simulated patients reflect real clinical encounters--for which sociolinguistics, defined as the study of language in its socio-cultural context, provides a helpful analytic lens. In this debate article, we draw on a detailed empirical study of assessed role-plays, involving sociolinguistic analysis of talk in OSCE interactions. We consider critically the evidence for the simulated consultation (a) as a proxy for the real; (b) as performance; (c) as a context for assessing talk; and (d) as potentially disadvantaging candidates trained overseas. Talk is always a performance in context, especially in professional situations (such as the consultation) and institutional ones (the assessment of professional skills and competence). Candidates who can handle the social and linguistic complexities of the artificial context of assessed role-plays score highly--yet what is being assessed is not real professional communication, but the ability to voice a credible appearance of such communication. Fidelity may not be the primary objective of simulation for medical training, where it enables the practising of skills. However the linguistic problems and differences that arise from interacting in artificial settings are of considerable importance in assessment, where we must be sure that the exam construct adequately embodies the skills expected for real-life practice. The reproducibility of assessed simulations should not be confused with their validity. Sociolinguistic analysis of simulations in various professional contexts has identified evidence for the gap between real interactions and assessed role-plays. The contextual conditions of the simulated

  6. Automatic Algorithm Selection for Complex Simulation Problems

    CERN Document Server

    Ewald, Roland


    To select the most suitable simulation algorithm for a given task is often difficult. This is due to intricate interactions between model features, implementation details, and runtime environment, which may strongly affect the overall performance. An automated selection of simulation algorithms supports users in setting up simulation experiments without demanding expert knowledge on simulation. Roland Ewald analyzes and discusses existing approaches to solve the algorithm selection problem in the context of simulation. He introduces a framework for automatic simulation algorithm selection and

  7. FPGA-accelerated simulation of computer systems

    CERN Document Server

    Angepat, Hari; Chung, Eric S; Hoe, James C; Chung, Eric S


    To date, the most common form of simulators of computer systems are software-based running on standard computers. One promising approach to improve simulation performance is to apply hardware, specifically reconfigurable hardware in the form of field programmable gate arrays (FPGAs). This manuscript describes various approaches of using FPGAs to accelerate software-implemented simulation of computer systems and selected simulators that incorporate those techniques. More precisely, we describe a simulation architecture taxonomy that incorporates a simulation architecture specifically designed f

  8. Participatory ergonomics simulation of hospital work systems: The influence of simulation media on simulation outcome

    DEFF Research Database (Denmark)

    Andersen, Simone Nyholm; Broberg, Ole


    Current application of work system simulation in participatory ergonomics (PE) design includes a variety of different simulation media. However, the actual influence of the media attributes on the simulation outcome has received less attention. This study investigates two simulation media: full......-scale mock-ups and table-top models. The aim is to compare, how the media attributes of fidelity and affordance influence the ergonomics identification and evaluation in PE design of hospital work systems. The results illustrate, how the full-scale mock-ups’ high fidelity of room layout and affordance...... of tool operation support ergonomics identification and evaluation related to the work system entities space and technologies & tools. The table-top models’ high fidelity of function relations and affordance of a helicopter view support ergonomics identification and evaluation related to the entity...

  9. Changes in thermo-tolerance and survival under simulated gastrointestinal conditions of Salmonella Enteritidis PT4 and Salmonella Typhimurium PT4 in chicken breast meat after exposure to sequential stresses. (United States)

    Melo, Adma Nadja Ferreira de; Souza, Geany Targino de; Schaffner, Donald; Oliveira, Tereza C Moreira de; Maciel, Janeeyre Ferreira; Souza, Evandro Leite de; Magnani, Marciane


    This study assessed changes in thermo-tolerance and capability to survive to simulated gastrointestinal conditions of Salmonella Enteritidis PT4 and Salmonella Typhimurium PT4 inoculated in chicken breast meat following exposure to stresses (cold, acid and osmotic) commonly imposed during food processing. The effects of the stress imposed by exposure to oregano (Origanum vulgare L.) essential oil (OVEO) on thermo-tolerance were also assessed. After exposure to cold stress (5°C for 5h) in chicken breast meat the test strains were sequentially exposed to the different stressing substances (lactic acid, NaCl or OVEO) at sub-lethal amounts, which were defined considering previously determined minimum inhibitory concentrations, and finally to thermal treatment (55°C for 30min). Resistant cells from distinct sequential treatments were exposed to simulated gastrointestinal conditions. The exposure to cold stress did not result in increased tolerance to acid stress (lactic acid: 5 and 2.5μL/g) for both strains. Cells of S. Typhimurium PT4 and S. Enteritidis PT4 previously exposed to acid stress showed higher (psurvived the sequential stress exposure (resistant) showed higher tolerance (psurvival rates (psurvival under gastrointestinal conditions of S. Enteritidis PT4 and S. Typhimurium PT4. Copyright © 2017 Elsevier B.V. All rights reserved.

  10. Parallel Simulation of Chip-Multiprocessor Architectures

    National Research Council Canada - National Science Library

    Chidester, Matthew C; George, Alan D


    Chip-multiprocessor (CMP) architectures present a challenge for efficient simulation, combining the requirements of a detailed microprocessor simulator with that of a tightly-coupled parallel system...

  11. Simulating Thermonuclear Runaway in Novae (United States)

    Dursi, L. J.; Truran, J.; Zingale, M.; Calder, A. C.; Fryxell, B.; Olson, K.; Ricker, P.; Rosner, R.; Timmes, F. X.; Tufo, H. M.; MacNeice, P.


    A nova is a thought to result from a partially degenerate thermonuclear runaway on the surface of a white dwarf. Material from the underlying white dwarf must be dredged up into the atmosphere in order to produce an explosion with the observed energies; the carbon and oxygen serve as catalysts for the hydrogen burning, allowing the much more temperature-sensitive CNO burning to occur. In order to understand this dredge-up problem, we are running two different types of simulations. The first are large-scale simulations with the FLASH code (Fryxell et al., 2000), using a one-dimensional set of initial conditions of a nova about to undergo runaway created by Ami Glasner. These initial conditions have been used in previous multidimensional simulations (Glasner et al. 1997; Kercek et al. 1998), but these simulations have given widely different results because of different mixing behaviors in the two codes. Our set of simulations will shed some light on this discrepancy; since our code has adaptive mesh refinement (MacNeice et al., 2000), we can afford to highly refine the region of the star where the mixing occurs, without the cost of highly refining the entire region. Because these large-scale computations are extremely compute-intensive, they are not appropriate for broad exploration of initial conditions. To do this, we use a One-Dimensional Turbulence (ODT) model which has been used in astrophysical models previously (Niemeyer & Kerstein, 1997). This allows us to use ODT simulations of the nova as experiments to guide us to interesting regimes to study further with multidimensional FLASH code simulations. This work was supported in part by the Department of Energy Grant No. B341495 to the Center for Astrophysical Thermonuclear Flashes at the University of Chicago under the ASCI Strategic Alliances Program and by NASA/Goddard Space Flight Center

  12. Computer Simulations of Space Plasmas (United States)

    Goertz, C. K.

    Even a superficial scanning of the latest issues of the Journal of Geophysical Research reveals that numerical simulation of space plasma processes is an active and growing field. The complexity and sophistication of numerically produced “data” rivals that of the real stuff. Sometimes numerical results need interpretation in terms of a simple “theory,” very much as the results of real experiments and observations do. Numerical simulation has indeed become a third independent tool of space physics, somewhere between observations and analytic theory. There is thus a strong need for textbooks and monographs that report the latest techniques and results in an easily accessible form. This book is an attempt to satisfy this need. The editors want it not only to be “proceedings of selected lectures (given) at the first ISSS (International School of Space Simulations in Kyoto, Japan, November 1-2, 1982) but rather…a form of textbook of computer simulations of space plasmas.” This is, of course, a difficult task when many authors are involved. Unavoidable redundancies and differences in notation may confuse the beginner. Some important questions, like numerical stability, are not discussed in sufficient detail. The recent book by C.K. Birdsall and A.B. Langdon (Plasma Physics via Computer Simulations, McGraw-Hill, New York, 1985) is more complete and detailed and seems more suitable as a textbook for simulations. Nevertheless, this book is useful to the beginner and the specialist because it contains not only descriptions of various numerical techniques but also many applications of simulations to space physics phenomena.

  13. Biomass Gasifier for Computer Simulation; Biomassa foergasare foer Computer Simulation

    Energy Technology Data Exchange (ETDEWEB)

    Hansson, Jens; Leveau, Andreas; Hulteberg, Christian [Nordlight AB, Limhamn (Sweden)


    This report is an effort to summarize the existing data on biomass gasifiers as the authors have taken part in various projects aiming at computer simulations of systems that include biomass gasification. Reliable input data is paramount for any computer simulation, but so far there is no easy-accessible biomass gasifier database available for this purpose. This study aims at benchmarking current and past gasifier systems in order to create a comprehensive database for computer simulation purposes. The result of the investigation is presented in a Microsoft Excel sheet, so that the user easily can implement the data in their specific model. In addition to provide simulation data, the technology is described briefly for every studied gasifier system. The primary pieces of information that are sought for are temperatures, pressures, stream compositions and energy consumption. At present the resulting database contains 17 gasifiers, with one or more gasifier within the different gasification technology types normally discussed in this context: 1. Fixed bed 2. Fluidised bed 3. Entrained flow. It also contains gasifiers in the range from 100 kW to 120 MW, with several gasifiers in between these two values. Finally, there are gasifiers representing both direct and indirect heating. This allows for a more qualified and better available choice of starting data sets for simulations. In addition to this, with multiple data sets available for several of the operating modes, sensitivity analysis of various inputs will improve simulations performed. However, there have been fewer answers to the survey than expected/hoped for, which could have improved the database further. However, the use of online sources and other public information has to some extent counterbalanced the low response frequency of the survey. In addition to that, the database is preferred to be a living document, continuously updated with new gasifiers and improved information on existing gasifiers.

  14. Validation of Quench Simulation and Simulation of the TWIN Solenoid

    CERN Document Server

    Pots, Rosalinde Hendrika


    For the Future Circular Collider at CERN a multi-purpose detector is proposed. The 6T TWIN Solenoid, a very large magnet system with a stored energy of 53 GJ, is being designed. It is important to protect the magnet against quenches in the system. Therefore several existing quench protection systems are evaluated and simulations have be performed on quenches in the TWIN Solenoid. The simulations on quenches in the TWIN Solenoid have been performed with promising results; the hotspot temperatures do not exceed 120 K and layer to layer voltages stay below 500 V. Adding quench heaters to the system might improve the quench protection system further.

  15. Debriefing in Simulation and Beyond. (United States)

    Abatzis, Vaia T; Littlewood, Keith E


    Debriefing, with its roots in military and aviation, is critically important to effective application of simulation education. With its widespread implementation and strong underpinnings in a variety of educational theories, debriefing is a central pillar of essentially all health care simulation centers. Even anesthesiologists who have completed training and practice outside of teaching centers will encounter debriefing when they participate in Part IV of Maintenance of Certification in Anesthesiology in endorsed simulation centers. Beyond this well-established presence, debriefing offers exciting opportunities for improvement of health care education and quality. First, debriefing practices should not be limited to the simulation setting. It is applicable to reflecting upon the crisis situations that are often faced by anesthesiologists, as well as a powerful tool for feedback on a daily basis. The improvement of feedback in both quality and quantity is considered by many educators to be a fundamental step in improving educational and training programs. The principles of debriefing, and probably more importantly the value of debriefing, are invaluable concepts for the clinical environment and amplify the impact of simulation in patient care. It can be reasonably argued that helping health care practitioners develop the habitual practice of giving and receiving feedback could become one of simulation educators' greatest contributions to patient safety. Another important role of debriefing should be in the area of IPE and practice. The challenges of IPE in simulation have been described; it is important for health care educators to be aware of these IPE experiences. These experiences have created a cadre of facilitators ready to participate in meaningful clinical debriefings across specialties and disciplines. Debriefing has played a central role in medical simulation since early implementation. This role is well founded in both history and in educational theory

  16. Design of simulation-based medical education and advantages and disadvantages of in situ simulation versus off-site simulation. (United States)

    Sørensen, Jette Led; Østergaard, Doris; LeBlanc, Vicki; Ottesen, Bent; Konge, Lars; Dieckmann, Peter; Van der Vleuten, Cees


    Simulation-based medical education (SBME) has traditionally been conducted as off-site simulation in simulation centres. Some hospital departments also provide off-site simulation using in-house training room(s) set up for simulation away from the clinical setting, and these activities are called in-house training. In-house training facilities can be part of hospital departments and resemble to some extent simulation centres but often have less technical equipment. In situ simulation, introduced over the past decade, mainly comprises of team-based activities and occurs in patient care units with healthcare professionals in their own working environment. Thus, this intentional blend of simulation and real working environments means that in situ simulation brings simulation to the real working environment and provides training where people work. In situ simulation can be either announced or unannounced, the latter also known as a drill. This article presents and discusses the design of SBME and the advantage and disadvantage of the different simulation settings, such as training in simulation-centres, in-house simulations in hospital departments, announced or unannounced in situ simulations. Non-randomised studies argue that in situ simulation is more effective for educational purposes than other types of simulation settings. Conversely, the few comparison studies that exist, either randomised or retrospective, show that choice of setting does not seem to influence individual or team learning. However, hospital department-based simulations, such as in-house simulation and in situ simulation, lead to a gain in organisational learning. To our knowledge no studies have compared announced and unannounced in situ simulation. The literature suggests some improved organisational learning from unannounced in situ simulation; however, unannounced in situ simulation was also found to be challenging to plan and conduct, and more stressful among participants. The importance of

  17. Simulation, Mastery Learning and Healthcare. (United States)

    Dunn, William; Dong, Yue; Zendejas, Benjamin; Ruparel, Raaj; Farley, David


    Healthcare organizations, becoming increasingly complex, need to use simulation techniques as a tool to provide consistently safe care. Mastery learning techniques minimize variation in learner outcome, thus improving the consistency and cost-effectiveness of care. Today׳s organizations (and their teams of decision makers) exist within varying states of transformation. These transformational times afford opportunities to use mastery learning concepts at an organizational level and to affect necessary change(s). Evolving technologies, including simulation, have provided mechanisms to enhance system performance, reducing reliance on custom-built "problem-solving" solutions for individual system needs. As such, simulation has emerged as an increasingly necessary organizational tool in improving value-driven, consistent processes of care. Both computer-based and non-computer-based algorithms of healthcare simulations offer distinct advantages in improving system performance over traditional methods of quality improvement. Simulation as a process engineering tool, integrated with mastery learning techniques, provides powerful platforms for improving value-based care. Copyright © 2017 Southern Society for Clinical Investigation. Published by Elsevier Inc. All rights reserved.

  18. Progress in modeling and simulation. (United States)

    Kindler, E


    For the modeling of systems, the computers are more and more used while the other "media" (including the human intellect) carrying the models are abandoned. For the modeling of knowledges, i.e. of more or less general concepts (possibly used to model systems composed of instances of such concepts), the object-oriented programming is nowadays widely used. For the modeling of processes existing and developing in the time, computer simulation is used, the results of which are often presented by means of animation (graphical pictures moving and changing in time). Unfortunately, the object-oriented programming tools are commonly not designed to be of a great use for simulation while the programming tools for simulation do not enable their users to apply the advantages of the object-oriented programming. Nevertheless, there are exclusions enabling to use general concepts represented at a computer, for constructing simulation models and for their easy modification. They are described in the present paper, together with true definitions of modeling, simulation and object-oriented programming (including cases that do not satisfy the definitions but are dangerous to introduce misunderstanding), an outline of their applications and of their further development. In relation to the fact that computing systems are being introduced to be control components into a large spectrum of (technological, social and biological) systems, the attention is oriented to models of systems containing modeling components.

  19. Manufacture of Lunar Regolith Simulants (United States)

    Rickman, D. L.; Wilson, S. A.; Stoeser, D. B.; Weinstein, M. A.; Edmunson, J. E.


    The manufacture of lunar regolith simulants can use many technologies unfamiliar to the aerospace industry. Many of these technologies are extensively used in the mining industry. Rock crushing, grinding, process control as a function of particle size, as well as other essential concepts are explained here. Notes are provided on special considerations necessary, given the unusual nature of the desired final product. For example, wet grinding, which is an industry norm, can alter the behavior of simulant materials. As the geologic materials used for simulants can contain minerals such as quartz and pyrite, guidance is provided regarding concepts, risks, measurement, and handling. Extractive metallurgy can be used to produce high-grade components for subsequent manufacture, reducing the compromises inherent in using just rock. Several of the components needed in simulants such as glasses, agglutinates, and breccias are simply not available or not reasonably matched by existing terrestrial resources. Therefore, techniques to produce these in useful quantities were developed and used. Included in this list is the synthesis of specific minerals. The manufacture of two simulants, NU-LHT-1M and NU-LHT-2M, is covered in detail.

  20. LFSC - Linac Feedback Simulation Code

    Energy Technology Data Exchange (ETDEWEB)

    Ivanov, Valentin; /Fermilab


    The computer program LFSC (Simulation Code>) is a numerical tool for simulation beam based feedback in high performance linacs. The code LFSC is based on the earlier version developed by a collective of authors at SLAC (L.Hendrickson, R. McEwen, T. Himel, H. Shoaee, S. Shah, P. Emma, P. Schultz) during 1990-2005. That code was successively used in simulation of SLC, TESLA, CLIC and NLC projects. It can simulate as pulse-to-pulse feedback on timescale corresponding to 5-100 Hz, as slower feedbacks, operating in the 0.1-1 Hz range in the Main Linac and Beam Delivery System. The code LFSC is running under Matlab for MS Windows operating system. It contains about 30,000 lines of source code in more than 260 subroutines. The code uses the LIAR ('Linear Accelerator Research code') for particle tracking under ground motion and technical noise perturbations. It uses the Guinea Pig code to simulate the luminosity performance. A set of input files includes the lattice description (XSIF format), and plane text files with numerical parameters, wake fields, ground motion data etc. The Matlab environment provides a flexible system for graphical output.

  1. Rapid ISS Power Availability Simulator (United States)

    Downing, Nicholas


    The ISS (International Space Station) Power Resource Officers (PROs) needed a tool to automate the calculation of thousands of ISS power availability simulations used to generate power constraint matrices. Each matrix contains 864 cells, and each cell represents a single power simulation that must be run. The tools available to the flight controllers were very operator intensive and not conducive to rapidly running the thousands of simulations necessary to generate the power constraint data. SOLAR is a Java-based tool that leverages commercial-off-the-shelf software (Satellite Toolkit) and an existing in-house ISS EPS model (SPEED) to rapidly perform thousands of power availability simulations. SOLAR has a very modular architecture and consists of a series of plug-ins that are loosely coupled. The modular architecture of the software allows for the easy replacement of the ISS power system model simulator, re-use of the Satellite Toolkit integration code, and separation of the user interface from the core logic. Satellite Toolkit (STK) is used to generate ISS eclipse and insulation times, solar beta angle, position of the solar arrays over time, and the amount of shadowing on the solar arrays, which is then provided to SPEED to calculate power generation forecasts. The power planning turn-around time is reduced from three months to two weeks (83-percent decrease) using SOLAR, and the amount of PRO power planning support effort is reduced by an estimated 30 percent.

  2. High Fidelity BWR Fuel Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, Su Jong [Idaho National Lab. (INL), Idaho Falls, ID (United States)


    This report describes the Consortium for Advanced Simulation of Light Water Reactors (CASL) work conducted for completion of the Thermal Hydraulics Methods (THM) Level 3 milestone THM.CFD.P13.03: High Fidelity BWR Fuel Simulation. High fidelity computational fluid dynamics (CFD) simulation for Boiling Water Reactor (BWR) was conducted to investigate the applicability and robustness performance of BWR closures. As a preliminary study, a CFD model with simplified Ferrule spacer grid geometry of NUPEC BWR Full-size Fine-mesh Bundle Test (BFBT) benchmark has been implemented. Performance of multiphase segregated solver with baseline boiling closures has been evaluated. Although the mean values of void fraction and exit quality of CFD result for BFBT case 4101-61 agreed with experimental data, the local void distribution was not predicted accurately. The mesh quality was one of the critical factors to obtain converged result. The stability and robustness of the simulation was mainly affected by the mesh quality, combination of BWR closure models. In addition, the CFD modeling of fully-detailed spacer grid geometry with mixing vane is necessary for improving the accuracy of CFD simulation.

  3. Simulators predict power plant operation

    Energy Technology Data Exchange (ETDEWEB)

    Peltier, R.


    Mix the complexity of a new construction or major retrofit project with today's 'do more with less', a pinch of 'personnel inexperience,' and a dash of 'unintended consequences', and you have got a recipe for insomnia. Advanced simulation tools, however, can help you wring out your design train your operators before the first wire is terminated and just may be get a good night's rest. The article describes several examples of uses of simulation tools. Esscor recently completed a simulation project for a major US utility exploring the potential for furnace/duct implosion that could result from adding higher volumetric flow induced-draft fans and selective catalytic reduction to a 650-MW coal-fired plant. CAF Electronics Inc. provided a full-scope simulator for Alstom's KA24-1 combined-cycle power plant in Paris, France. Computational fluid dynamics (CFD) tools are being used by the Gas Technology Institute to simulate the performance of the next generation of pulverized coal combustors. 5 figs.

  4. ATLAS Fast Tracker Simulation Challenges

    CERN Document Server

    Adelman, Jahred; The ATLAS collaboration; Borodin, Mikhail; Chakraborty, Dhiman; García Navarro, José Enrique; Golubkov, Dmitry; Kama, Sami; Panitkin, Sergey; Smirnov, Yuri; Stewart, Graeme; Tompkins, Lauren; Vaniachine, Alexandre; Volpi, Guido


    To deal with Big Data flood from the ATLAS detector most events have to be rejected in the trigger system. the trigger rejection is complicated by the presence of a large number of minimum-bias events – the pileup. To limit pileup effects in the high luminosity environment of the LHC Run-2, ATLAS relies on full tracking provided by the Fast TracKer (FTK) implemented with custom electronics. The FTK data processing pipeline has to be simulated in preparation for LHC upgrades to support electronics design and develop trigger strategies at high luminosity. The simulation of the FTK - a highly parallelized system - has inherent performance bottlenecks on general-purpose CPUs. To take advantage of the Grid Computing power, the FTK simulation is integrated with Monte Carlo simulations at the Production System level above the ATLAS workload management system PanDA. We report on ATLAS experience with FTK simulations on the Grid and next steps for accommodating the growing requirements for resources during the LHC R...

  5. Reliability of analog quantum simulation

    Energy Technology Data Exchange (ETDEWEB)

    Sarovar, Mohan [Sandia National Laboratories, Digital and Quantum Information Systems, Livermore, CA (United States); Zhang, Jun; Zeng, Lishan [Shanghai Jiao Tong University, Joint Institute of UMich-SJTU, Key Laboratory of System Control and Information Processing (MOE), Shanghai (China)


    Analog quantum simulators (AQS) will likely be the first nontrivial application of quantum technology for predictive simulation. However, there remain questions regarding the degree of confidence that can be placed in the results of AQS since they do not naturally incorporate error correction. Specifically, how do we know whether an analog simulation of a quantum model will produce predictions that agree with the ideal model in the presence of inevitable imperfections? At the same time there is a widely held expectation that certain quantum simulation questions will be robust to errors and perturbations in the underlying hardware. Resolving these two points of view is a critical step in making the most of this promising technology. In this work we formalize the notion of AQS reliability by determining sensitivity of AQS outputs to underlying parameters, and formulate conditions for robust simulation. Our approach naturally reveals the importance of model symmetries in dictating the robust properties. To demonstrate the approach, we characterize the robust features of a variety of quantum many-body models. (orig.)

  6. Simulating solar power plant variability :

    Energy Technology Data Exchange (ETDEWEB)

    Lave, Matthew Samuel; Ellis, Abraham; Stein, Joshua.


    It is important to be able to accurately simulate the variability of solar PV power plants for grid integration studies. We aim to inform integration studies of the ease of implementation and application-specific accuracy of current PV power plant output simulation methods. This report reviews methods for producing simulated high-resolution (sub-hour or even sub-minute) PV power plant output profiles for variability studies and describes their implementation. Two steps are involved in the simulations: estimation of average irradiance over the footprint of a PV plant and conversion of average irradiance to plant power output. Six models are described for simulating plant-average irradiance based on inputs of ground-measured irradiance, satellite-derived irradiance, or proxy plant measurements. The steps for converting plant-average irradiance to plant power output are detailed to understand the contributions to plant variability. A forthcoming report will quantify the accuracy of each method using application-specific validation metrics.

  7. Stochastic models: theory and simulation.

    Energy Technology Data Exchange (ETDEWEB)

    Field, Richard V., Jr.


    Many problems in applied science and engineering involve physical phenomena that behave randomly in time and/or space. Examples are diverse and include turbulent flow over an aircraft wing, Earth climatology, material microstructure, and the financial markets. Mathematical models for these random phenomena are referred to as stochastic processes and/or random fields, and Monte Carlo simulation is the only general-purpose tool for solving problems of this type. The use of Monte Carlo simulation requires methods and algorithms to generate samples of the appropriate stochastic model; these samples then become inputs and/or boundary conditions to established deterministic simulation codes. While numerous algorithms and tools currently exist to generate samples of simple random variables and vectors, no cohesive simulation tool yet exists for generating samples of stochastic processes and/or random fields. There are two objectives of this report. First, we provide some theoretical background on stochastic processes and random fields that can be used to model phenomena that are random in space and/or time. Second, we provide simple algorithms that can be used to generate independent samples of general stochastic models. The theory and simulation of random variables and vectors is also reviewed for completeness.

  8. Infrastructure for distributed enterprise simulation

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, M.M.; Yoshimura, A.S.; Goldsby, M.E. [and others


    Traditional discrete-event simulations employ an inherently sequential algorithm and are run on a single computer. However, the demands of many real-world problems exceed the capabilities of sequential simulation systems. Often the capacity of a computer`s primary memory limits the size of the models that can be handled, and in some cases parallel execution on multiple processors could significantly reduce the simulation time. This paper describes the development of an Infrastructure for Distributed Enterprise Simulation (IDES) - a large-scale portable parallel simulation framework developed to support Sandia National Laboratories` mission in stockpile stewardship. IDES is based on the Breathing-Time-Buckets synchronization protocol, and maps a message-based model of distributed computing onto an object-oriented programming model. IDES is portable across heterogeneous computing architectures, including single-processor systems, networks of workstations and multi-processor computers with shared or distributed memory. The system provides a simple and sufficient application programming interface that can be used by scientists to quickly model large-scale, complex enterprise systems. In the background and without involving the user, IDES is capable of making dynamic use of idle processing power available throughout the enterprise network. 16 refs., 14 figs.

  9. Discrete and continuous simulation theory and practice

    CERN Document Server

    Bandyopadhyay, Susmita


    When it comes to discovering glitches inherent in complex systems-be it a railway or banking, chemical production, medical, manufacturing, or inventory control system-developing a simulation of a system can identify problems with less time, effort, and disruption than it would take to employ the original. Advantageous to both academic and industrial practitioners, Discrete and Continuous Simulation: Theory and Practice offers a detailed view of simulation that is useful in several fields of study.This text concentrates on the simulation of complex systems, covering the basics in detail and exploring the diverse aspects, including continuous event simulation and optimization with simulation. It explores the connections between discrete and continuous simulation, and applies a specific focus to simulation in the supply chain and manufacturing field. It discusses the Monte Carlo simulation, which is the basic and traditional form of simulation. It addresses future trends and technologies for simulation, with par...

  10. Effect of UVC, UVB, UVA and a solar simulator on the survival of mouse melanoma cell lines differing in melanin content

    Energy Technology Data Exchange (ETDEWEB)

    Hill, H.Z.; Hill, G.J.; Cieszka, K.; Azure, M. [New Jersey Medical School, Newark, NJ (United States)


    These studies were designed to determine the survival of cells that vary in constitutive pigment levels after exposure to different UV wave lengths. The lamps employed emitted UVC (near monochromatic 254 nm), UVB (Philips TL01-88.7% of UV output is UVB), UVA (Philips HPW125-89% of output is at 365 nm) and Westinghouse FS20 (broad band UVB and UVA). Dish lids were used to cut off UVC in the UVB and FS20 experiments and 0.25 inch plate glass was used to cut off UVB in the UVA experiments. UVC photons interact with putative intracellular photosensitizers which in turn convert O{sub 2} to active oxygen species which damage DNA to produce strand breaks, cross links and base damage. UVB acts by both mechanisms. The two cell lines studied were Cloudman S91/I3 (3.6 pg melanin/cell) and the closely related S91/amel (1.2 pg melanin/cell). Attached cells were covered with Ca{sup ++} and Mg{sup ++} free PBS and irradiated in the cold. Colonies were scored after 2 weeks. The two cell lines exhibit similar survival kinetics after UVC. S91/IE is more sensitive to killing by either UVB (TL01) or UVA. However, S91/amel cells are more sensitive to killing by UVB plus UVA (FS20). It is clear that UV of different qualities can interact to produce effects that would not be predicted based on responses to monochromatic wave lengths.

  11. Simulating Collective Effects on GPUs

    CERN Document Server

    AUTHOR|(CDS)2095754; Arbenz, Peter

    Computer simulations are an important tool to study the dynamics of charged particles in particle accelerators, with new hardware solutions such as GPUs providing a vast increase in computing power. In the accelerator physics domain simulations are used to understand instabilities arising due to collective e↵ects in high intensity beams which limit the accelerator performance. In this thesis PyHEADTAIL, a code to study collective effects in synchrotrons, is ported to GPUs using PyCUDA. The goal is to achieve a significant speedup while at the same time producing a simple interface for users and other developers. A speedup of 6 compared to the CPU version is achieved on a typical simulation study of instabilities in the Large Hadron Collider (LHC) at CERN.

  12. Performance of distributed multiscale simulations (United States)

    Borgdorff, J.; Ben Belgacem, M.; Bona-Casas, C.; Fazendeiro, L.; Groen, D.; Hoenen, O.; Mizeranschi, A.; Suter, J. L.; Coster, D.; Coveney, P. V.; Dubitzky, W.; Hoekstra, A. G.; Strand, P.; Chopard, B.


    Multiscale simulations model phenomena across natural scales using monolithic or component-based code, running on local or distributed resources. In this work, we investigate the performance of distributed multiscale computing of component-based models, guided by six multiscale applications with different characteristics and from several disciplines. Three modes of distributed multiscale computing are identified: supplementing local dependencies with large-scale resources, load distribution over multiple resources, and load balancing of small- and large-scale resources. We find that the first mode has the apparent benefit of increasing simulation speed, and the second mode can increase simulation speed if local resources are limited. Depending on resource reservation and model coupling topology, the third mode may result in a reduction of resource consumption. PMID:24982258

  13. Modelica-based TCP simulation (United States)

    Velieva, T. R.; Eferina, E. G.; Korolkova, A. V.; Kulyabov, D. S.; Sevastianov, L. A.


    For the study and verification of our mathematical model of telecommunication systems a discrete simulation model and a continuous analytical model were developed. However, for various reasons, these implementations are not entirely satisfactory. It is necessary to develop a more adequate simulation model, possibly using a different modeling paradigm. In order to modeling of the TCP source it is proposed to use a hybrid (continuous-discrete) approach. For computer implementation of the model the physical modeling language Modelica is used. The hybrid approach allows us to take into account the transitions between different states in the continuous model of the TCP protocol. The considered approach allowed to obtain a simple simulation model of TCP source. This model has great potential for expansion. It is possible to implement different types of TCP.

  14. Computer simulation of superionic fluorides

    CERN Document Server

    Castiglione, M


    experimentally gives an indication of the correlations between nearby defects is well-reproduced. The most stringent test of simulation model transferability is presented in the studies of lead tin fluoride, in which significant 'covalent' effects are apparent. Other similarly-structured compounds are also investigated, and the reasons behind the adoption of such an unusual layered structure, and the mobility and site occupation of the anions is quantified. In this thesis the nature of ion mobility in cryolite and lead fluoride based compounds is investigated by computer simulation. The phase transition of cryolite is characterised in terms of rotation of AIF sub 6 octahedra, and the conductive properties are shown to result from diffusion of the sodium ions. The two processes appear to be unrelated. Very good agreement with NMR experimental results is found. The Pb sup 2 sup + ion has a very high polarisability, yet treatment of this property in previous simulations has been problematic. In this thesis a mor...

  15. Simulating chemistry using quantum computers. (United States)

    Kassal, Ivan; Whitfield, James D; Perdomo-Ortiz, Alejandro; Yung, Man-Hong; Aspuru-Guzik, Alán


    The difficulty of simulating quantum systems, well known to quantum chemists, prompted the idea of quantum computation. One can avoid the steep scaling associated with the exact simulation of increasingly large quantum systems on conventional computers, by mapping the quantum system to another, more controllable one. In this review, we discuss to what extent the ideas in quantum computation, now a well-established field, have been applied to chemical problems. We describe algorithms that achieve significant advantages for the electronic-structure problem, the simulation of chemical dynamics, protein folding, and other tasks. Although theory is still ahead of experiment, we outline recent advances that have led to the first chemical calculations on small quantum information processors.

  16. A Multiprocessor Operating System Simulator (United States)

    Johnston, Gary M.; Campbell, Roy H.


    This paper describes a multiprocessor operating system simulator that was developed by the authors in the Fall semester of 1987. The simulator was built in response to the need to provide students with an environment in which to build and test operating system concepts as part of the coursework of a third-year undergraduate operating systems course. Written in C++, the simulator uses the co-routine style task package that is distributed with the AT&T C++ Translator to provide a hierarchy of classes that represents a broad range of operating system software and hardware components. The class hierarchy closely follows that of the 'Choices' family of operating systems for loosely- and tightly-coupled multiprocessors. During an operating system course, these classes are refined and specialized by students in homework assignments to facilitate experimentation with different aspects of operating system design and policy decisions. The current implementation runs on the IBM RT PC under 4.3bsd UNIX.

  17. Smart systems integration and simulation

    CERN Document Server

    Poncino, Massimo; Pravadelli, Graziano


    This book-presents new methods and tools for the integration and simulation of smart devices. The design approach described in this book explicitly accounts for integration of Smart Systems components and subsystems as a specific constraint. It includes methodologies and EDA tools to enable multi-disciplinary and multi-scale modeling and design, simulation of multi-domain systems, subsystems and components at all levels of abstraction, system integration and exploration for optimization of functional and non-functional metrics. By covering theoretical and practical aspects of smart device design, this book targets people who are working and studying on hardware/software modelling, component integration and simulation under different positions (system integrators, designers, developers, researchers, teachers, students etc.). In particular, it is a good introduction to people who have interest in managing heterogeneous components in an efficient and effective way on different domains and different abstraction l...

  18. Software Simulation of Hot Tearing

    DEFF Research Database (Denmark)

    Andersen, S.; Hansen, P.N.; Hattel, Jesper Henri


    . With this additional information, the criteria can, for the first time, be used to their full potential.The purpose of this paper is to first give an introduction to a stress/strain simulation procedure that can be used in any foundry. Then, some results how to predict the hot cracking tendency in a casting are shown......The brittleness of a solidifying alloy in a temperature range near the solidus temperature has been recognised since the fifties as the mechanism responsible for hot tearing. Due to this brittlenes, the metal will crack under even small amounts of strain in that temperature range. We see these hot...... the solidification rate and the strain rate of the hot tear prone areas. But, until recently it was only possible to simulate the solidification rate, so that the criteria could not be used effectively.Today, with new software developments, it is possible to also simulate the strain rate in the hot tear prone areas...

  19. Simulation of human renal system. (United States)

    Mahmood, Haydar A; Botros, Nazeih M


    The goal of this study is to develop a synthesisable computer-simulated model that mimics the function of a simplified renal system. Hardware description language has been used to simulate the model. In future phase of this study, the model will be realised on an electronic chip such as 'Field Programmable Gate Arrays'. The simulated model introduces a dynamic representation of the human body fluid balance under normal conditions and displays the change of urine flow with the amount of ingested water. The inputs of the model are average values of parameters extracted from the renal system. Some of these parameters and variables are: arterial pressure, daily ingested fluid volume, daily ingested sodium, daily ingested potassium, extracellular fluid volume, intracellular fluid volume, renin concentration, angiotensin II concentration, and aldosterone concentration. Our results show that the output of the model is in agreement with those of the literatures.

  20. Bigraphical Languages and their Simulation

    DEFF Research Database (Denmark)

    Højsgaard, Espen

    We study bigraphs as a foundation for practical formal languages and the problem of simulating such bigraphical languages. The theory of bigraphs is a foundational, graphical model of concurrent systems focusing on mobility and connectivity. It is a meta-model in the sense that it is parametrized...... for practical formal languages. However, while direct models of many process calculi have been constructed, it is unclear how suitable bigraphs are for more practical formal languages. Also, the generality of bigraphs comes at a price of complexity in the theory and simulation of bigraphical models is non......-trivial. A key problem is that of matching: deciding if and how a reaction rule applies to a bigraph. In this dissertation, we study bigraphs and their simulation for two types of practical formal languages: programming languages and languages for cell biology. First, we study programming languages and binding...

  1. Simulating social complexity a handbook

    CERN Document Server

    Meyer, Ruth


    Social systems are among the most complex known. This poses particular problems for those who wish to understand them. The complexity often makes analytic approaches infeasible and natural language approaches inadequate for relating intricate cause and effect. However, individual- and agent-based computational approaches hold out the possibility of new and deeper understanding of such systems.  Simulating Social Complexity examines all aspects of using agent- or individual-based simulation. This approach represents systems as individual elements having each their own set of differing states and internal processes. The interactions between elements in the simulation represent interactions in the target systems. What makes these elements "social" is that they are usefully interpretable as interacting elements of an observed society. In this, the focus is on human society, but can be extended to include social animals or artificial agents where such work enhances our understanding of human society.  The phenom...

  2. Activity of daptomycin or linezolid in combination with rifampin or gentamicin against biofilm-forming Enterococcus faecalis or E. faecium in an in vitro pharmacodynamic model using simulated endocardial vegetations and an in vivo survival assay using Galleria mellonella larvae. (United States)

    Luther, Megan K; Arvanitis, Marios; Mylonakis, Eleftherios; LaPlante, Kerry L


    Enterococci are the third most frequent cause of infective endocarditis. A high-inoculum stationary-phase in vitro pharmacodynamic model with simulated endocardial vegetations was used to simulate the human pharmacokinetics of daptomycin at 6 or 10 mg/kg of body weight/day or linezolid at 600 mg every 12 h (q12h), alone or in combination with gentamicin at 1.3 mg/kg q12h or rifampin at 300 mg q8h or 900 mg q24h. Biofilm-forming, vancomycin-susceptible Enterococcus faecalis and vancomycin-resistant Enterococcus faecium (vancomycin-resistant enterococcus [VRE]) strains were tested. At 24, 48, and 72 h, all daptomycin-containing regimens demonstrated significantly more activity (decline in CFU/g) than any linezolid-containing regimen against biofilm-forming E. faecalis. The addition of gentamicin to daptomycin (at 6 or 10 mg/kg) in the first 24 h significantly improved bactericidal activity. In contrast, the addition of rifampin delayed the bactericidal activity of daptomycin against E. faecalis, and the addition of rifampin antagonized the activities of all regimens against VRE at 24 h. Also, against VRE, the addition of gentamicin to linezolid at 72 h improved activity and was bactericidal. Rifampin significantly antagonized the activity of linezolid against VRE at 72 h. In in vivo Galleria mellonella survival assays, linezolid and daptomycin improved survival. Daptomycin at 10 mg/kg improved survival significantly over that with linezolid against E. faecalis. The addition of gentamicin improved the efficacy of daptomycin against E. faecalis and those of linezolid and daptomycin against VRE. We conclude that in enterococcal infection models, daptomycin has more activity than linezolid alone. Against biofilm-forming E. faecalis, the addition of gentamicin in the first 24 h causes the most rapid decline in CFU/g. Of interest, the addition of rifampin decreased the activity of daptomycin against both E. faecalis and VRE. Copyright © 2014, American Society for

  3. Numerical simulations of Lake Vostok (United States)

    Curchitser, E.; Tremblay, B.


    Numerical simulations of Lake Vostok We present a systematic approach towards a realistic hydrodynamic model of lake Vostok. The lake is characterized by the unusual combination of size (permitting significant geostrophic motion) and an overlying ice sheet several kilometers thick. A priori estimates of the circulation in the deep lake predict a mostly geostrophic circulation driven by horizontal temperature gradients produced by the pressure-dependent freezing point at the base of the (non-uniform) ice sheet. Further preliminary (remote) research has revealed the steep topography and the elliptical geometry of the lake. A three dimensional, primitive equation, free surface, model is used as a starting point for the Lake configuration. We show how the surface pressure gradient forces are modified to permit a simulation that includes the hydrostatic effects of the overlying ice sheet. A thermodynamic ice model is coupled with the circulation component to simulate the ice accretion/melting at the base of the ice sheet. A stretching of the terrain following vertical coordinate is used to resolve the boundary layer in the ice/water interface. Furthermore, the terrain-following coordinate evolves in time, and is used to track the evolution of the ice sheet due to ice accretion/melting. Both idealized and realistic ice sheet bottom topographies (from remote radar data) are used to drive the simulations. Steady state and time evolving simulations (i.e., constant and evolving ice sheet geometry) will be descirbed, as well as a comparison to an idealized box model (Tremblay, Clarke, and Hohman). The coastline and lake bathymetry used in the simulation are derived from radar data and are accurately represented in our model.

  4. Error coding simulations in C (United States)

    Noble, Viveca K.


    When data is transmitted through a noisy channel, errors are produced within the data rendering it indecipherable. Through the use of error control coding techniques, the bit error rate can be reduced to any desired level without sacrificing the transmission data rate. The Astrionics Laboratory at Marshall Space Flight Center has decided to use a modular, end-to-end telemetry data simulator to simulate the transmission of data from flight to ground and various methods of error control. The simulator includes modules for random data generation, data compression, Consultative Committee for Space Data Systems (CCSDS) transfer frame formation, error correction/detection, error generation and error statistics. The simulator utilizes a concatenated coding scheme which includes CCSDS standard (255,223) Reed-Solomon (RS) code over GF(2(exp 8)) with interleave depth of 5 as the outermost code, (7, 1/2) convolutional code as an inner code and CCSDS recommended (n, n-16) cyclic redundancy check (CRC) code as the innermost code, where n is the number of information bits plus 16 parity bits. The received signal-to-noise for a desired bit error rate is greatly reduced through the use of forward error correction techniques. Even greater coding gain is provided through the use of a concatenated coding scheme. Interleaving/deinterleaving is necessary to randomize burst errors which may appear at the input of the RS decoder. The burst correction capability length is increased in proportion to the interleave depth. The modular nature of the simulator allows for inclusion or exclusion of modules as needed. This paper describes the development and operation of the simulator, the verification of a C-language Reed-Solomon code, and the possibility of using Comdisco SPW(tm) as a tool for determining optimal error control schemes.

  5. ALLAN.simulation club; Club ALLAN.simulation

    Energy Technology Data Exchange (ETDEWEB)

    Boudaud, F.


    The ALLAN.Simulation code was developed by the R and D direction of Gaz de France (GdF) company with the support of CISI and Dassault Data Services companies. Its aim is to provide a modeling tool for the design and operation of complex technical systems. It uses a `boxes and ropes` representation (non-oriented multi-variable bloc-schemes) which allows the re-use of all or part of previous models or analyses already developed and recorded. The third meeting of the non-GdF users of the ALLAN.Simulation code took place at Sophia Antipolis (France) on May 27, 1994. Several studies performed with ALLAN.Simulation were presented and dealt with: a thermohydraulic loop, an alternator for automobile, and the hydration of cements. This report is a compilation of the transparencies relative to these three studies. A last part is devoted the presentation of the possible links between different existing simulation codes: ALLAN, BASILE, MAPLE, NEPTUNIX. (J.S.)

  6. Manned maneuvering unit simulations on the Space Operations Simulator (United States)

    Hartley, C.; Cwynar, D.; Ray, L.


    Details of the Manned Maneuvering Unit (MMU) and its use is discussed. MMU simulations in the Space Operations Simulator (SOS) use two major devices. The first is a six-degree-of-freedom moving base carriage that allows the trainee freedom to fly the MMU in a large room and to match rates and dock with full scale targets. The second device is a large screen television display that provides the trainee with accurate views of tumbling targets from any point in a surrounding sphere up to 300 meters (1000 feet) in diameter. Astronauts used the SOS to train for the Solar Max repair mission and are now using it to train for a mission to recover the Palapa-B communications satellite. Subjective comparisons by astronauts of an orbit MMU performance to simulated MMU performance in the SOS indicate that the simulations are very realistic. Data from the Solar Max mission have resulted in two software upgrades that increase SOS fidelity for the next MMU mission: a model of contact dynamics between the MMU and a target spacecraft, and a model of MMU plume impingement forces during docking.

  7. Integrating Existing Simulation Components into a Cohesive Simulation System (United States)

    McLaughlin, Brian J.; Barrett, Larry K.


    A tradition of leveraging the re-use of components to help manage costs has evolved in the development of complex system. This tradition continues on in the Joint Polar Satellite System (JPSS) Program with the cloning of the Suomi National Polar-orbiting Partnership (NPP) satellite for the JPSS-1 mission, including the instrument complement. One benefit of re-use on a mission is the availability of existing simulation assets from the systems that were previously built. An issue arises in the continual shift of technology over a long mission, or multi-mission, lifecycle. As the missions mature, the requirements for the observatory simulations evolve. The challenge in this environment becomes re-using the existing components in that ever-changing landscape. To meet this challenge, the system must: establish an operational architecture that minimizes impacts on the implementation of individual components, consolidate the satisfaction of new high-impact requirements into system-level infrastructure, and build in a long-term view of system adaptation that spans the full lifecycle of the simulation system. The Flight Vehicle Test Suite (FVTS) within the JPSS Program is defining and executing this approach to ensure a robust simulation capability for the JPSS multi-mission environment

  8. Simulated Citizen: How Students Experienced a Semester Length Legislative Simulation (United States)

    Ganzler, Louis M.


    This collective case study contains the results of year-long inquiry into how students experienced a semester length legislative simulation that was rife with political conflict. Specifically the study sought to determine: what teaching strategies were employed, what role conflict played in affecting students' political engagement, and what the…

  9. Integrating software architectures for distributed simulations and simulation analysis communities.

    Energy Technology Data Exchange (ETDEWEB)

    Goldsby, Michael E.; Fellig, Daniel; Linebarger, John Michael; Moore, Patrick Curtis; Sa, Timothy J.; Hawley, Marilyn F.


    The one-year Software Architecture LDRD (No.79819) was a cross-site effort between Sandia California and Sandia New Mexico. The purpose of this research was to further develop and demonstrate integrating software architecture frameworks for distributed simulation and distributed collaboration in the homeland security domain. The integrated frameworks were initially developed through the Weapons of Mass Destruction Decision Analysis Center (WMD-DAC), sited at SNL/CA, and the National Infrastructure Simulation & Analysis Center (NISAC), sited at SNL/NM. The primary deliverable was a demonstration of both a federation of distributed simulations and a federation of distributed collaborative simulation analysis communities in the context of the same integrated scenario, which was the release of smallpox in San Diego, California. To our knowledge this was the first time such a combination of federations under a single scenario has ever been demonstrated. A secondary deliverable was the creation of the standalone GroupMeld{trademark} collaboration client, which uses the GroupMeld{trademark} synchronous collaboration framework. In addition, a small pilot experiment that used both integrating frameworks allowed a greater range of crisis management options to be performed and evaluated than would have been possible without the use of the frameworks.

  10. Using Simulation to Improve Systems. (United States)

    Kearney, James A; Deutsch, Ellen S


    Attempts to understand and improve health care delivery often focus on the characteristics of the patient and the characteristics of the health care providers, but larger systems surround and integrate with patients and providers. Components of health care delivery systems can support or interfere with efforts to provide optimal health care. Simulation in situ, involving real teams participating in simulations in real care settings, can be used to identify latent safety threats and improve the work environment while simultaneously supporting participant learning. Thoughtful planning and skilled debriefing are essential. Copyright © 2017 Elsevier Inc. All rights reserved.

  11. Design automation, languages, and simulations

    CERN Document Server

    Chen, Wai-Kai


    As the complexity of electronic systems continues to increase, the micro-electronic industry depends upon automation and simulations to adapt quickly to market changes and new technologies. Compiled from chapters contributed to CRC's best-selling VLSI Handbook, this volume covers a broad range of topics relevant to design automation, languages, and simulations. These include a collaborative framework that coordinates distributed design activities through the Internet, an overview of the Verilog hardware description language and its use in a design environment, hardware/software co-design, syst

  12. Nonlinear Multigrid for Reservoir Simulation

    DEFF Research Database (Denmark)

    Christensen, Max la Cour; Eskildsen, Klaus Langgren; Engsig-Karup, Allan Peter


    A feasibility study is presented on the effectiveness of applying nonlinear multigrid methods for efficient reservoir simulation of subsurface flow in porous media. A conventional strategy modeled after global linearization by means of Newton’s method is compared with an alternative strategy...... efficiency for a black-oil model. Furthermore, the use of the FAS method enables a significant reduction in memory usage compared with conventional techniques, which suggests new possibilities for improved large-scale reservoir simulation and numerical efficiency. Last, nonlinear multilevel preconditioning...

  13. Proton Upset Monte Carlo Simulation (United States)

    O'Neill, Patrick M.; Kouba, Coy K.; Foster, Charles C.


    The Proton Upset Monte Carlo Simulation (PROPSET) program calculates the frequency of on-orbit upsets in computer chips (for given orbits such as Low Earth Orbit, Lunar Orbit, and the like) from proton bombardment based on the results of heavy ion testing alone. The software simulates the bombardment of modern microelectronic components (computer chips) with high-energy (.200 MeV) protons. The nuclear interaction of the proton with the silicon of the chip is modeled and nuclear fragments from this interaction are tracked using Monte Carlo techniques to produce statistically accurate predictions.

  14. Simple Simulations of DNA Condensation

    Energy Technology Data Exchange (ETDEWEB)



    Molecular dynamics simulations of a simple, bead-spring model of semiflexible polyelectrolytes such as DNA are performed. All charges are explicitly treated. Starting from extended, noncondensed conformations, condensed structures form in the simulations with tetravalent or trivalent counterions. No condensates form or are stable for divalent counterions. The mechanism by which condensates form is described. Briefly, condensation occurs because electrostatic interactions dominate entropy, and the favored Coulombic structure is a charge ordered state. Condensation is a generic phenomena and occurs for a variety of polyelectrolyte parameters. Toroids and rods are the condensate structures. Toroids form preferentially when the molecular stiffness is sufficiently strong.

  15. Simulations of Astrophysical fluid instabilities (United States)

    Calder, A. C.; Fryxell, B.; Rosner, R.; Dursi, L. J.; Olson, K.; Ricker, P. M.; Timmes, F. X.; Zingale, M.; MacNeice, P.; Tufo, H. M.


    We present direct numerical simulations of mixing at Rayleigh-Taylor unstable interfaces performed with the FLASH code, developed at the ASCI/Alliances Center for Astrophysical Thermonuclear Flashes at the University of Chicago. We present initial results of single-mode studies in two and three dimensions. Our results indicate that three-dimensional instabilities grow significantly faster than two-dimensional instabilities and that grid resolution can have a significant effect on instability growth rates. We also find that unphysical diffusive mixing occurs at the fluid interface, particularly in poorly resolved simulations. .

  16. Simulations of the Microwave Sky

    Energy Technology Data Exchange (ETDEWEB)

    Sehgal, Neelima; /KIPAC, Menlo Park; Bode, Paul; /Princeton U., Astrophys. Sci. Dept.; Das, Sudeep; /Princeton U., Astrophys. Sci. Dept. /Princeton U.; Hernandez-Monteagudo, Carlos; /Garching, Max Planck Inst.; Huffenberger, Kevin; /Miami U.; Lin, Yen-Ting; /Tokyo U., IPMU; Ostriker, Jeremiah P.; /Princeton U., Astrophys. Sci. Dept.; Trac, Hy; /Harvard-Smithsonian Ctr. Astrophys.


    We create realistic, full-sky, half-arcminute resolution simulations of the microwave sky matched to the most recent astrophysical observations. The primary purpose of these simulations is to test the data reduction pipeline for the Atacama Cosmology Telescope (ACT) experiment; however, we have widened the frequency coverage beyond the ACT bands and utilized the easily accessible HEALPix map format to make these simulations applicable to other current and near future microwave background experiments. Some of the novel features of these simulations are that the radio and infrared galaxy populations are correlated with the galaxy cluster and group populations, the primordial microwave background is lensed by the dark matter structure in the simulation via a ray-tracing code, the contribution to the thermal and kinetic Sunyaev-Zel'dovich (SZ) signals from galaxy clusters, groups, and the intergalactic medium has been included, and the gas prescription to model the SZ signals has been refined to match the most recent X-ray observations. The cosmology adopted in these simulations is also consistent with the WMAP 5-year parameter measurements. From these simulations we find a slope for the Y{sub 200} - M{sub 200} relation that is only slightly steeper than self-similar, with an intrinsic scatter in the relation of {approx} 14%. Regarding the contamination of cluster SZ flux by radio galaxies, we find for 148 GHz (90 GHz) only 3% (4%) of halos have their SZ decrements contaminated at a level of 20% or more. We find the contamination levels higher for infrared galaxies. However, at 90 GHz, less than 20% of clusters with M{sub 200} > 2.5 x 10{sup 14}M{sub {circle_dot}} and z < 1.2 have their SZ decrements filled in at a level of 20% or more. At 148 GHz, less than 20% of clusters with M{sub 200} > 2.5 x 10{sup 14}M{sub {circle_dot}} and z < 0.8 have their SZ decrements filled in at a level of 50% or larger. Our models also suggest that a population of very high flux

  17. Computer simulation of martensitic transformations

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Ping [Univ. of California, Berkeley, CA (United States)


    The characteristics of martensitic transformations in solids are largely determined by the elastic strain that develops as martensite particles grow and interact. To study the development of microstructure, a finite-element computer simulation model was constructed to mimic the transformation process. The transformation is athermal and simulated at each incremental step by transforming the cell which maximizes the decrease in the free energy. To determine the free energy change, the elastic energy developed during martensite growth is calculated from the theory of linear elasticity for elastically homogeneous media, and updated as the transformation proceeds.

  18. Simulator training for endobronchial ultrasound

    DEFF Research Database (Denmark)

    Konge, Lars; Clementsen, Paul Frost; Ringsted, Charlotte


    Endobronchial ultrasound-guided transbronchial needle aspiration (EBUS-TBNA) is very operator dependent and has a long learning curve. Simulation-based training might shorten the learning curve, and an assessment tool with solid validity evidence could ensure basic competency before unsupervised......-trained novices and apprenticeship-trained novices failing the test, respectively; pultrasound assessment tool could be used to provide reliable and valid assessment of competence in EBUS-TBNA, and act as an aid in certification. Virtual-reality simulator training was shown to be more...

  19. Probabilistic Simulation for Nanocomposite Fracture (United States)

    Chamis, Christos C.


    A unique probabilistic theory is described to predict the uniaxial strengths and fracture properties of nanocomposites. The simulation is based on composite micromechanics with progressive substructuring down to a nanoscale slice of a nanofiber where all the governing equations are formulated. These equations have been programmed in a computer code. That computer code is used to simulate uniaxial strengths and fracture of a nanofiber laminate. The results are presented graphically and discussed with respect to their practical significance. These results show smooth distributions from low probability to high.

  20. Control of complex physically simulated robot groups (United States)

    Brogan, David C.


    Actuated systems such as robots take many forms and sizes but each requires solving the difficult task of utilizing available control inputs to accomplish desired system performance. Coordinated groups of robots provide the opportunity to accomplish more complex tasks, to adapt to changing environmental conditions, and to survive individual failures. Similarly, groups of simulated robots, represented as graphical characters, can test the design of experimental scenarios and provide autonomous interactive counterparts for video games. The complexity of writing control algorithms for these groups currently hinders their use. A combination of biologically inspired heuristics, search strategies, and optimization techniques serve to reduce the complexity of controlling these real and simulated characters and to provide computationally feasible solutions.

  1. Towards quantum simulations of biological information flow. (United States)

    Dorner, Ross; Goold, John; Vedral, Vlatko


    Recent advances in the spectroscopy of biomolecules have highlighted the possibility of quantum coherence playing an active role in biological energy transport. The revelation that quantum coherence can survive in the hot and wet environment of biology has generated a lively debate across both the physics and biology communities. In particular, it remains unclear to what extent non-trivial quantum effects are used in biology and what advantage, if any, they afford. We propose an analogue quantum simulator, based on currently available techniques in ultra-cold atom physics, to study a model of energy and electron transport based on the Holstein Hamiltonian. By simulating the salient aspects of a biological system in a tunable laboratory set-up, we hope to gain insight into the validity of several theoretical models of biological quantum transport in a variety of relevant parameter regimes.

  2. Tempting food words activate eating simulations

    NARCIS (Netherlands)

    Papies, E.K.|info:eu-repo/dai/nl/304832766


    This study shows that tempting food words activate simulations of eating the food, including simulations of the taste and texture of the food, simulations of eating situations, and simulations of hedonic enjoyment. In a feature listing task, participants generated features that are typically true of

  3. The new ATLAS Fast Calorimeter Simulation (United States)

    Schaarschmidt, J.; ATLAS Collaboration


    Current and future need for large scale simulated samples motivate the development of reliable fast simulation techniques. The new Fast Calorimeter Simulation is an improved parameterized response of single particles in the ATLAS calorimeter that aims to accurately emulate the key features of the detailed calorimeter response as simulated with Geant4, yet approximately ten times faster. Principal component analysis and machine learning techniques are used to improve the performance and decrease the memory need compared to the current version of the ATLAS Fast Calorimeter Simulation. A prototype of this new Fast Calorimeter Simulation is in development and its integration into the ATLAS simulation infrastructure is ongoing.

  4. The new ATLAS Fast Calorimeter Simulation

    CERN Document Server

    AUTHOR|(INSPIRE)INSPIRE-00223142; The ATLAS collaboration


    Current and future need for large scale simulated samples motivate the development of reliable fast simulation techniques. The new Fast Calorimeter Simulation is an improved parameterized response of single particles in the ATLAS calorimeter that aims to accurately emulate the key features of the detailed calorimeter response as simulated with Geant4, yet approximately ten times faster. Principal component analysis and machine learning techniques are used to improve the performance and decrease the memory need compared to the current version of the ATLAS Fast Calorimeter Simulation. A prototype of this new Fast Calorimeter Simulation is in development and its integration into the ATLAS simulation infrastructure is ongoing.

  5. The power of simulating experiments

    NARCIS (Netherlands)

    Meyer, K.M.; Mooij, W.M.; Vos, M.; Hol, W.H.G.; Putten, van der W.H.


    Addressing complex ecological research questions often requires complex empirical experiments. However, due to the logistic constraints of empirical studies there is a trade-off between the complexity of experimental designs and sample size. Here, we explore if the simulation of complex ecological

  6. Simulating Building Fires for Movies (United States)

    Rodriguez, Ricardo C.; Johnson, Randall P.


    Fire scenes for cinematography staged at relatively low cost in method that combines several existing techniques. Nearly realistic scenes, suitable for firefighter training, produced with little specialized equipment. Sequences of scenes set up quickly and easily, without compromising safety because model not burned. Images of fire, steam, and smoke superimposed on image of building to simulate burning of building.

  7. Slope failure simulations with MPM

    NARCIS (Netherlands)

    Vardon, P.J.; Wang, B.; Hicks, M.A.


    The simulation of slope failures, including both failure initiation and development, has been modelled using the material point method (MPM). Numerical case studies involving various slope angles, heterogeneity and rainfall infiltration are presented. It is demonstrated that, by utilising a

  8. Slope Failure Simulations with MPM

    NARCIS (Netherlands)

    Vardon, P.J.; Wang, B.; Hicks, M.A.


    The simulation of slope failures, including both failure initiation and development, has been modelled using the material point method. By utilising a constitutive model which encompasses, in a simplified manner, both pre- and post-failure behaviour, the majority of types of geotechnical slope

  9. Agent Based Simulation Output Analysis (United States)


    over long periods of time) not to have a steady state, but apparently does. These simulation models are available free from 2.1...are used in computer animations and movies (for example, in the movie Jurassic Park) as well as to look for emergent social behavior in groups

  10. Electric-hybrid-vehicle simulation (United States)

    Pasma, D. C.

    The simulation of electric hybrid vehicles is to be performed using experimental data to model propulsion system components. The performance of an existing ac propulsion system will be used as the baseline for comparative purposes. Hybrid components to be evaluated include electrically and mechanically driven flywheels, and an elastomeric regenerative braking system.

  11. Simulation of Test Case B

    DEFF Research Database (Denmark)

    Skovgaard, M.; Nielsen, Peter V.

    This report shows the results of the simulations given in research item 1.19 (isothermal forced convection) within the work of International Energy Agency (lEA), Annex 20 subtask 1. The title of this work is "Air Flow within Buildings" and the working title for subtask 1 is "Room Air...

  12. Xyce parallel electronic simulator design.

    Energy Technology Data Exchange (ETDEWEB)

    Thornquist, Heidi K.; Rankin, Eric Lamont; Mei, Ting; Schiek, Richard Louis; Keiter, Eric Richard; Russo, Thomas V.


    This document is the Xyce Circuit Simulator developer guide. Xyce has been designed from the 'ground up' to be a SPICE-compatible, distributed memory parallel circuit simulator. While it is in many respects a research code, Xyce is intended to be a production simulator. As such, having software quality engineering (SQE) procedures in place to insure a high level of code quality and robustness are essential. Version control, issue tracking customer support, C++ style guildlines and the Xyce release process are all described. The Xyce Parallel Electronic Simulator has been under development at Sandia since 1999. Historically, Xyce has mostly been funded by ASC, the original focus of Xyce development has primarily been related to circuits for nuclear weapons. However, this has not been the only focus and it is expected that the project will diversify. Like many ASC projects, Xyce is a group development effort, which involves a number of researchers, engineers, scientists, mathmaticians and computer scientists. In addition to diversity of background, it is to be expected on long term projects for there to be a certain amount of staff turnover, as people move on to different projects. As a result, it is very important that the project maintain high software quality standards. The point of this document is to formally document a number of the software quality practices followed by the Xyce team in one place. Also, it is hoped that this document will be a good source of information for new developers.

  13. Statistical Literacy: Simulations with Dolphins (United States)

    Strayer, Jeremy; Matuszewski, Amber


    In this article, Strayer and Matuszewski present a six-phase strategy that teachers can use to help students develop a conceptual understanding of inferential hypothesis testing through simulation. As Strayer and Matuszewski discuss the strategy, they describe each phase in general, explain how they implemented the phase while teaching their…

  14. Numerical simulation of muzzle blast

    NARCIS (Netherlands)

    Tyler-Street, M.


    Structural design methods for naval ships include environmental, operational and military load cases. One of the operational loads acting on a typical naval vessel is the muzzle blast from a gun. Simulating the muzzle blast load acting on a ship structure with CFD and ALE methods leads to large

  15. Simulated Batch Production of Penicillin (United States)

    Whitaker, A.; Walker, J. D.


    Describes a program in applied biology in which the simulation of the production of penicillin in a batch fermentor is used as a teaching technique to give students experience before handling a genuine industrial fermentation process. Details are given for the calculation of minimum production cost. (JR)

  16. Manpower Analysis Using Discrete Simulation (United States)


    levels, which focuses the analysis on mean performance of the MOEs. The stepwise regression bases initial factor selection on Akaike’s Information...important factors that describe the personnel system response (model outputs) as functions of the policy choices (simulation inputs). Multiple regressions ...development of all our models. E. METAMODEL CONSTRUCTION Using linear regression , we can derive relationships between factor settings and observed

  17. ATLAS simulated black hole event

    CERN Multimedia

    Pequenão, J


    The simulated collision event shown is viewed along the beampipe. The event is one in which a microscopic-black-hole was produced in the collision of two protons (not shown). The microscopic-black-hole decayed immediately into many particles. The colors of the tracks show different types of particles emerging from the collision (at the center).

  18. Anilortem: A Siting Simulation Game. (United States)

    Canipe, Stephen L.

    This siting game is based on the assumption that students will become involved in research required to determine the need for a power plant. Once the need is established, students must determine the location and type of plant to be built. There are brief character sketches which describe the key actors in the simulation. It is suggested that…

  19. Simulations of Closed Timelike Curves (United States)

    Brun, Todd A.; Wilde, Mark M.


    Proposed models of closed timelike curves (CTCs) have been shown to enable powerful information-processing protocols. We examine the simulation of models of CTCs both by other models of CTCs and by physical systems without access to CTCs. We prove that the recently proposed transition probability CTCs (T-CTCs) are physically equivalent to postselection CTCs (P-CTCs), in the sense that one model can simulate the other with reasonable overhead. As a consequence, their information-processing capabilities are equivalent. We also describe a method for quantum computers to simulate Deutschian CTCs (but with a reasonable overhead only in some cases). In cases for which the overhead is reasonable, it might be possible to perform the simulation in a table-top experiment. This approach has the benefit of resolving some ambiguities associated with the equivalent circuit model of Ralph et al. Furthermore, we provide an explicit form for the state of the CTC system such that it is a maximum-entropy state, as prescribed by Deutsch.

  20. Computer Based Modelling and Simulation

    Indian Academy of Sciences (India)

    This is supposed to recall gambling and hence the name Monte Carlo simulation. The procedure was developed by. Stanislaw Ulam and John Van Neumann. They used the simu- lation method to solve partial differential equations for diffu- sion of neutrons! (Box 2). We can illustrate the MC method by a simple example.

  1. ESP Syllabus Change and Simulation. (United States)

    McGinley, Kevin


    Discusses the lack of applications of simulations to the study of English for academic purposes. Advocates a "looser" syllabus design which combines knowledge about learning objectives, organization of material, and methodology yet allows for students' needs and ways of learning. (SED)

  2. CERN Fire Brigade rescue simulation

    CERN Multimedia

    Maximilien Brice


    The CERN Fire Brigade is made up of experienced firemen from all of the 20 Member States. In these images they are seen at a 'Discovery Monday' held at the Microcosm exhibition. Here visitors learn how the Fire Brigade deal with various situations, including a simulated cave rescue performed by the Hazardous Environments Response Team.

  3. Solar array manufacturing industry simulation (United States)

    Chamberlain, R. G.; Firnett, P. J.; Kleine, B.


    Solar Array Manufacturing Industry Simulation (SAMIS) program is a standardized model of industry to manufacture silicon solar modules for use in electricity generation. Model is used to develop financial reports that detail requirements, including amounts and prices for materials, labor, facilities, and equipment required by companies.

  4. A Solar Sailcraft Simulation Application (United States)

    Celeda, Tomáš


    An application was created to encourage students' practical knowledge of gravitational fields, the law of conservation of energy and other phenomena, such as gravitational slingshots. The educational software simulates the flight of a solar sail spacecraft between two planets of the Solar System using the laws of gravity and radiation…

  5. Optics simulations: a Python workshop (United States)

    Ghalila, H.; Ammar, A.; Varadharajan, S.; Majdi, Y.; Zghal, M.; Lahmar, S.; Lakshminarayanan, V.


    Numerical simulations allow teachers and students to indirectly perform sophisticated experiments that cannot be realizable otherwise due to cost and other constraints. During the past few decades there has been an explosion in the development of numerical tools concurrently with open source environments such as Python software. This availability of open source software offers an incredible opportunity for advancing teaching methodologies as well as in research. More specifically it is possible to correlate theoretical knowledge with experimental measurements using "virtual" experiments. We have been working on the development of numerical simulation tools using the Python program package and we have concentrated on geometric and physical optics simulations. The advantage of doing hands-on numerical experiments is that it allows the student learner to be an active participant in the pedagogical/learning process rather than playing a passive role as in the traditional lecture format. Even in laboratory classes because of constraints of space, lack of equipment and often-large numbers of students, many students play a passive role since they work in groups of 3 or more students. Furthermore these new tools help students get a handle on numerical methods as well simulations and impart a "feel" for the physics under investigation.

  6. The Spacelab IPS Star Simulator (United States)

    Wessling, Francis C., III

    The cost of doing business in space is very high. If errors occur while in orbit the costs grow and desired scientific data may be corrupted or even lost. The Spacelab Instrument Pointing System (IPS) Star Simulator is a unique test bed that allows star trackers to interface with simulated stars in a laboratory before going into orbit. This hardware-in-the loop testing of equipment on earth increases the probability of success while in space. The IPS Star Simulator provides three fields of view 2.55 x 2.55 degrees each for input into star trackers. The fields of view are produced on three separate monitors. Each monitor has 4096 x 4096 addressable points and can display 50 stars (pixels) maximum at a given time. The pixel refresh rate is 1000 Hz. The spectral output is approximately 550 nm. The available relative visual magnitude range is 2 to 8 visual magnitudes. The star size is less than 100 arc seconds. The minimum star movement is less than 5 arc seconds and the relative position accuracy is approximately 40 arc seconds. The purpose of this paper is to describe the LPS Star Simulator design and to provide an operational scenario so others may gain from the approach and possible use of the system.

  7. Molecular dynamics simulation of nanoindentation

    NARCIS (Netherlands)

    Michielsen, K; Figge, MT; De Raedt, H; De Hosson, JTM; Landau, DP; Lewis, SP; Schuttler, HB


    Molecular dynamics simulations are used to investigate the nucleation and dynamics of dislocations during nanoindentation of a (111) FCC plane. The core structure around the dislocation is visualized by coloring the atoms with deviating coordination number and its Burgers vector is automatically

  8. Molecular dynamics simulation of nanoindentation

    NARCIS (Netherlands)

    Michielsen, K.; Figge, M.T.; Raedt, H. De; Hosson, J.T.M. De


    Molecular dynamics simulations are used to investigate the nucleation and dynamics of dislocations during nanoindentation of a (111) FCC plane. The core structure around the dislocation is visualized by coloring the atoms with deviating coordination number and its Burgers vector is automatically

  9. Destruction Chemistry of Mustard Simulants (United States)


    organosulfur compounds under both pyrolytic and oxidative conditions. We focus on the destruction of alkyl sulfides that are surrogates for chemical... organosulfur , oxidation, pyrolysis, chemical kinetic mechanism, thermochemistry, reaction, kinetics, flow reactor, GC/MS, FTIR, mustard agent simulant, CWA...destruction chemistry of organosulfur compounds under both pyrolytic and oxidative conditions. We focus on the destruction of alkyl sulfides that are

  10. Interactive Simulations of Biohybrid Systems

    Directory of Open Access Journals (Sweden)

    Sebastian Albrecht von Mammen


    Full Text Available In this article, we present approaches to interactive simulations of biohybrid systems. These simulations are comprised of two major computational components: (1 agent-based developmental models that retrace organismal growth and unfolding of technical scaffoldings and (2 interfaces to explore these models interactively. Simulations of biohybrid systems allow us to fast forward and experience their evolution over time based on our design decisions involving the choice, configuration and initial states of the deployed biological and robotic actors as well as their interplay with the environment. We briefly introduce the concept of swarm grammars, an agent-based extension of L-systems for retracing growth processes and structural artifacts. Next, we review an early augmented reality prototype for designing and projecting biohybrid system simulations into real space. In addition to models that retrace plant behaviors, we specify swarm grammar agents to braid structures in a self-organizing manner. Based on this model, both robotic and plant-driven braiding processes can be experienced and explored in virtual worlds. We present an according user interface for use in virtual reality. As we present interactive models concerning rather diverse description levels, we only ensured their principal capacity for interaction but did not consider efficiency analyzes beyond prototypic operation. We conclude this article with an outlook on future works on melding reality and virtuality to drive the design and deployment of biohybrid systems.

  11. Simulated Sampling of Estuary Plankton (United States)

    Fortner, Rosanne W.; Jenkins, Deborah Bainer


    To find out about the microscopic life in the valuable estuary environment, it is usually necessary to be near the water. This dry lab offers an alternative, using authentic data and a simulation of plankton sampling. From the types of organisms found in the sample, middle school students can infer relationships in the biological and physical…

  12. Statewide mesoscopic simulation for Wyoming. (United States)


    This study developed a mesoscopic simulator which is capable of representing both city-level and statewide roadway : networks. The key feature of such models are the integration of (i) a traffic flow model which is efficient enough to : scale to larg...

  13. Simulation of Floaters in Action

    DEFF Research Database (Denmark)

    Nielsen, Morten Eggert; Ulriksen, Martin Dalgaard; Damkilde, Lars

    This report is the first in a series of three, which altogether documents: 1. theory 2. numerical implementation 3. application for Simulation of Floaters in Action (SOFIA), which is a structural analysis tool for slender offshore structures, such as monopiles, jacket structures and floating space...

  14. The Airport Network Flow Simulator. (United States)


    The impact of investment at an individual airport is felt through-out the National Airport System by reduction of delays at other airports in the the system. A GPSS model was constructed to simulate the propagation of delays through a nine-airport sy...

  15. Microprocessor Simulation: A Training Technique. (United States)

    Oscarson, David J.


    Describes the design and application of a microprocessor simulation using BASIC for formal training of technicians and managers and as a management tool. Illustrates the utility of the modular approach for the instruction and practice of decision-making techniques. (SK)

  16. Realistic simulations of coaxial atomisation (United States)

    Zaleski, Stephane; Fuster, Daniel; Arrufat Jackson, Tomas; Ling, Yue; Cenni, Matteo; Scardovelli, Ruben; Tryggvason, Gretar


    We discuss advances in the methodology for Direct Numerical Simulations of coaxial atomization in typical experimental conditions. Such conditions are extremely demanding for the numerical methods. The key difficulty seems to be the combination of high density ratios, surface tension, and large Reynolds numbers. We explore how using a momentum-conserving Volume-Of-Fluid scheme allows to improve the stability and accuracy of the simulations. We show computational evidence that the use of momentum conserving methods allows to reduce the required number of grid points by an order of magnitude in the simple case of a falling rain drop. We then apply these ideas to coaxial atomization. We show that in moderate-size simulations in air-water conditions close to real experiments, instabilities are still present and then discuss ways to fix them. Among those, removing small VOF debris and improving the time-stepping scheme are two important directions.The accuracy of the simulations is then discussed in comparison with experimental results and in particular the angle of ejection of the structures. The code used for this research is free and distributed at

  17. Modeling control in manufacturing simulation

    NARCIS (Netherlands)

    Zee, Durk-Jouke van der; Chick, S.; Sánchez, P.J.; Ferrin, D.; Morrice, D.J.


    A significant shortcoming of traditional simulation languages is the lack of attention paid to the modeling of control structures, i.e., the humans or systems responsible for manufacturing planning and control, their activities and the mutual tuning of their activities. Mostly they are hard coded

  18. Numerical Propulsion System Simulation Architecture (United States)

    Naiman, Cynthia G.


    The Numerical Propulsion System Simulation (NPSS) is a framework for performing analysis of complex systems. Because the NPSS was developed using the object-oriented paradigm, the resulting architecture is an extensible and flexible framework that is currently being used by a diverse set of participants in government, academia, and the aerospace industry. NPSS is being used by over 15 different institutions to support rockets, hypersonics, power and propulsion, fuel cells, ground based power, and aerospace. Full system-level simulations as well as subsystems may be modeled using NPSS. The NPSS architecture enables the coupling of analyses at various levels of detail, which is called numerical zooming. The middleware used to enable zooming and distributed simulations is the Common Object Request Broker Architecture (CORBA). The NPSS Developer's Kit offers tools for the developer to generate CORBA-based components and wrap codes. The Developer's Kit enables distributed multi-fidelity and multi-discipline simulations, preserves proprietary and legacy codes, and facilitates addition of customized codes. The platforms supported are PC, Linux, HP, Sun, and SGI.

  19. Computer Based Modelling and Simulation

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 6; Issue 3. Computer Based Modelling and Simulation - Modelling Deterministic Systems. N K Srinivasan. General Article Volume 6 Issue 3 March 2001 pp 46-54. Fulltext. Click here to view fulltext PDF. Permanent link:

  20. Understanding molecular simulation from algorithms to applications

    CERN Document Server

    Frenkel, Daan


    Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the ""recipes"" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique for a given application. A wide variety of tools exist, so the choice of technique requires a good understanding of the basic principles. More importantly, such understanding may greatly improve the efficiency of a simulation program. The implementation of simulation methods is illustrated in pseudocodes and their practic