Modeling Soil Organic Carbon Turnover in Four Temperate Forests Based on Radiocarbon Measurements of Heterotrophic Respiration and Soil Organic Carbon

Science.gov (United States)

Ahrens, B.; Borken, W.; Muhr, J.; Schrumpf, M.; Savage, K. E.; Wutzler, T.; Trumbore, S.; Reichstein, M.

2011-12-01

Soils of temperate forests store significant amounts of soil organic matter and are considered to be net sinks of atmospheric CO2. Soil organic carbon (SOC) dynamics have been studied using the Δ14C signature of bulk SOC or different SOC fractions as observational constraints in SOC models. Further, the Δ14C signature of CO2 evolved during the incubation of soil and roots has been widely used together with Δ14C of total soil respiration to partition soil respiration into heterotrophic respiration (Rh) and root respiration. However, these data have rarely been used together as observational constraints to determine SOC turnover times. Here, we present a multiple constraints approach, where we used SOC stock and its Δ14C signature, and heterotrophic respiration and its Δ14C signature to estimate SOC turnover times of a simple serial two-pool model via Bayesian optimization. We used data from four temperate forest ecosystems in Germany and the USA with different disturbance and management histories from selective logging to afforestation in the late 19th and early 20th century. The Δ14C signature of the atmosphere with its prominent bomb peak was used as a proxy for the Δ14C signature of aboveground and belowground litterfall. The Δ14C signature of litterfall was lagged behind the atmospheric signal to account for the period between photosynthetic fixation of carbon and its addition to SOC pools. We showed that the combined use of Δ14C measurements of Rh and SOC stocks helped to better constrain turnover times of the fast pool (primarily by Δ14C of Rh) and the slow pool (primarily by Δ14C of SOC). In particular, by introducing two additional parameters that describe the deviation from steady state of the fast and slow cycling pool for both SOC and SO14C, we were able to demonstrate that we cannot maintain the often used steady-state assumption of SOC models in general. Furthermore, a new transport version of our model, including SOC transport via

Toxicological benchmarks for screening potential contaminants of concern for effects on soil and litter invertebrates and heterotrophic process

International Nuclear Information System (INIS)

Will, M.E.; Suter, G.W. II.

1994-09-01

One of the initial stages in ecological risk assessments for hazardous waste sites is the screening of contaminants to determine which of them are worthy of further consideration as open-quotes contaminants of potential concern.close quotes This process is termed open-quotes contaminant screening.close quotes It is performed by comparing measured ambient concentrations of chemicals to benchmark concentrations. Currently, no standard benchmark concentrations exist for assessing contaminants in soil with respect to their toxicity to soil- and litter-dwelling invertebrates, including earthworms, other micro- and macroinvertebrates, or heterotrophic bacteria and fungi. This report presents a standard method for deriving benchmarks for this purpose, sets of data concerning effects of chemicals in soil on invertebrates and soil microbial processes, and benchmarks for chemicals potentially associated with United States Department of Energy sites. In addition, literature describing the experiments from which data were drawn for benchmark derivation. Chemicals that are found in soil at concentrations exceeding both the benchmarks and the background concentration for the soil type should be considered contaminants of potential concern

Toxicological benchmarks for screening potential contaminants of concern for effects on soil and litter invertebrates and heterotrophic process

Energy Technology Data Exchange (ETDEWEB)

Will, M.E.; Suter, G.W. II

1994-09-01

One of the initial stages in ecological risk assessments for hazardous waste sites is the screening of contaminants to determine which of them are worthy of further consideration as {open_quotes}contaminants of potential concern.{close_quotes} This process is termed {open_quotes}contaminant screening.{close_quotes} It is performed by comparing measured ambient concentrations of chemicals to benchmark concentrations. Currently, no standard benchmark concentrations exist for assessing contaminants in soil with respect to their toxicity to soil- and litter-dwelling invertebrates, including earthworms, other micro- and macroinvertebrates, or heterotrophic bacteria and fungi. This report presents a standard method for deriving benchmarks for this purpose, sets of data concerning effects of chemicals in soil on invertebrates and soil microbial processes, and benchmarks for chemicals potentially associated with United States Department of Energy sites. In addition, literature describing the experiments from which data were drawn for benchmark derivation. Chemicals that are found in soil at concentrations exceeding both the benchmarks and the background concentration for the soil type should be considered contaminants of potential concern.

Linking annual N2O emission in organic soils to mineral nitrogen input as estimated by heterotrophic respiration and soil C/N ratio.

Science.gov (United States)

Mu, Zhijian; Huang, Aiying; Ni, Jiupai; Xie, Deti

2014-01-01

Organic soils are an important source of N2O, but global estimates of these fluxes remain uncertain because measurements are sparse. We tested the hypothesis that N2O fluxes can be predicted from estimates of mineral nitrogen input, calculated from readily-available measurements of CO2 flux and soil C/N ratio. From studies of organic soils throughout the world, we compiled a data set of annual CO2 and N2O fluxes which were measured concurrently. The input of soil mineral nitrogen in these studies was estimated from applied fertilizer nitrogen and organic nitrogen mineralization. The latter was calculated by dividing the rate of soil heterotrophic respiration by soil C/N ratio. This index of mineral nitrogen input explained up to 69% of the overall variability of N2O fluxes, whereas CO2 flux or soil C/N ratio alone explained only 49% and 36% of the variability, respectively. Including water table level in the model, along with mineral nitrogen input, further improved the model with the explanatory proportion of variability in N2O flux increasing to 75%. Unlike grassland or cropland soils, forest soils were evidently nitrogen-limited, so water table level had no significant effect on N2O flux. Our proposed approach, which uses the product of soil-derived CO2 flux and the inverse of soil C/N ratio as a proxy for nitrogen mineralization, shows promise for estimating regional or global N2O fluxes from organic soils, although some further enhancements may be warranted.

Toxicological benchmarks for potential contaminants of concern for effects on soil and litter invertebrates and heterotrophic process

Energy Technology Data Exchange (ETDEWEB)

Will, M.E.; Suter, G.W. II

1995-09-01

An important step in ecological risk assessments is screening the chemicals occur-ring on a site for contaminants of potential concern. Screening may be accomplished by comparing reported ambient concentrations to a set of toxicological benchmarks. Multiple endpoints for assessing risks posed by soil-borne contaminants to organisms directly impacted by them have been established. This report presents benchmarks for soil invertebrates and microbial processes and addresses only chemicals found at United States Department of Energy (DOE) sites. No benchmarks for pesticides are presented. After discussing methods, this report presents the results of the literature review and benchmark derivation for toxicity to earthworms (Sect. 3), heterotrophic microbes and their processes (Sect. 4), and other invertebrates (Sect. 5). The final sections compare the benchmarks to other criteria and background and draw conclusions concerning the utility of the benchmarks.

Genomics and ecophysiology of heterotrophic nitrogen fixing bacteria isolated from estuarine surface water

DEFF Research Database (Denmark)

Bentzon-Tilia, Mikkel; Severin, Ina; Hansen, Lars H.

2015-01-01

The ability to reduce atmospheric nitrogen (N2) to ammonia, known as N2 fixation, is a widely distributed trait among prokaryotes that accounts for an essential input of new N to a multitude of environments. Nitrogenase reductase gene (nifH) composition suggests that putative N2-fixing heterotrop......The ability to reduce atmospheric nitrogen (N2) to ammonia, known as N2 fixation, is a widely distributed trait among prokaryotes that accounts for an essential input of new N to a multitude of environments. Nitrogenase reductase gene (nifH) composition suggests that putative N2-fixing...... heterotrophic organisms are widespread in marine bacterioplankton, but their autecology and ecological significance are unknown. Here, we report genomic and ecophysiology data in relation to N2 fixation by three environmentally relevant heterotrophic bacteria isolated from Baltic Sea surface water: Pseudomonas...... liter-1, presumably accommodated through aggregate formation. Glucose stimulated N2 fixation in general, and reactive N repressed N2 fixation, except that ammonium (NH4 ) stimulated N2 fixation in R. palustris BAL398, indicating the use of nitrogenase as an electron sink. The lack of correlations...

Winter climate controls soil carbon dynamics during summer in boreal forests

International Nuclear Information System (INIS)

Haei, Mahsa; Öquist, Mats G; Ilstedt, Ulrik; Laudon, Hjalmar; Kreyling, Juergen

2013-01-01

Boreal forests, characterized by distinct winter seasons, store a large proportion of the global terrestrial carbon (C) pool. We studied summer soil C-dynamics in a boreal forest in northern Sweden using a seven-year experimental manipulation of soil frost. We found that winter soil climate conditions play a major role in controlling the dissolution/mineralization of soil organic-C in the following summer season. Intensified soil frost led to significantly higher concentrations of dissolved organic carbon (DOC). Intensified soil frost also led to higher rates of basal heterotrophic CO 2 production in surface soil samples. However, frost-induced decline in the in situ soil CO 2 concentrations in summer suggests a substantial decline in root and/or plant associated rhizosphere CO 2 production, which overrides the effects of increased heterotrophic CO 2 production. Thus, colder winter soils, as a result of reduced snow cover, can substantially alter C-dynamics in boreal forests by reducing summer soil CO 2 efflux, and increasing DOC losses. (letter)

Decadal warming causes a consistent and persistent shift from heterotrophic to autotrophic respiration in contrasting permafrost ecosystems.

Science.gov (United States)

Hicks Pries, Caitlin E; van Logtestijn, Richard S P; Schuur, Edward A G; Natali, Susan M; Cornelissen, Johannes H C; Aerts, Rien; Dorrepaal, Ellen

2015-12-01

Soil carbon in permafrost ecosystems has the potential to become a major positive feedback to climate change if permafrost thaw increases heterotrophic decomposition. However, warming can also stimulate autotrophic production leading to increased ecosystem carbon storage-a negative climate change feedback. Few studies partitioning ecosystem respiration examine decadal warming effects or compare responses among ecosystems. Here, we first examined how 11 years of warming during different seasons affected autotrophic and heterotrophic respiration in a bryophyte-dominated peatland in Abisko, Sweden. We used natural abundance radiocarbon to partition ecosystem respiration into autotrophic respiration, associated with production, and heterotrophic decomposition. Summertime warming decreased the age of carbon respired by the ecosystem due to increased proportional contributions from autotrophic and young soil respiration and decreased proportional contributions from old soil. Summertime warming's large effect was due to not only warmer air temperatures during the growing season, but also to warmer deep soils year-round. Second, we compared ecosystem respiration responses between two contrasting ecosystems, the Abisko peatland and a tussock-dominated tundra in Healy, Alaska. Each ecosystem had two different timescales of warming (permafrost ecosystems. © 2015 John Wiley & Sons Ltd.

Meeting on the Microbiology of Soils, Autumn 2001: Estimation of protozoan diversity in soil

DEFF Research Database (Denmark)

Ekelund, Flemming

2002-01-01

Different methods of estimating protozoan diversity in soil are discussed in this paper, with the major emphasis on heterotrophic flagellates. Although many species of ciliates and testate amoebae seem to be unique to the soil environment, the communities of heterotrophic flagellates and naked am...

Are variations in heterotrophic soil respiration related to changes in substrate availability and microbial biomass carbon in the subtropical forests?

Science.gov (United States)

Wei, Hui; Chen, Xiaomei; Xiao, Guoliang; Guenet, Bertrand; Vicca, Sara; Shen, Weijun

2015-12-16

Soil temperature and moisture are widely-recognized controlling factors on heterotrophic soil respiration (Rh), although they often explain only a portion of Rh variability. How other soil physicochemical and microbial properties may contribute to Rh variability has been less studied. We conducted field measurements on Rh half-monthly and associated soil properties monthly for two years in four subtropical forests of southern China to assess influences of carbon availability and microbial properties on Rh. Rh in coniferous forest was significantly lower than that in the other three broadleaf species-dominated forests and exhibited obvious seasonal variations in the four forests (P forests. The quantity and decomposability of dissolved organic carbon (DOC) were significantly important to Rh variations, but the effect of DOC content on Rh was confounded with temperature, as revealed by partial mantel test. Microbial biomass carbon (MBC) was significantly related to Rh variations across forests during the warm season (P = 0.043). Our results suggest that DOC and MBC may be important when predicting Rh under some conditions, and highlight the complexity by mutual effects of them with environmental factors on Rh variations.

Microbial Response to UV Exposure and Nitrogen Limitation in Desert Soil Crusts

Science.gov (United States)

Fulton, J. M.; Van Mooy, B. A.

2016-12-01

Microbiotic soil crusts have diverse biomarker distributions and C and N stable isotopic compositions that covary with soil type. Sparse plant cover and the relative lack of soil disturbance in arid/semi-arid landscapes allows populations of soil cyanobacteria to develop along with fungi and heterotrophic bacteria. Microbial communities in this extreme environment depend in part on the production of scytonemin, a UV protective pigment, by cyanobacteria near the top of the crust. N limitation of microbial growth also affects soil crust population dynamics, increasing the requirement of N2fixation by diazotrophic cyanobacteria. We collected 56 soil crust samples from 27 locations throughout the Great Salt Lake Desert, including four transects spanning high-elevation, erosion-dominated soils to lower elevation soils dominated by silt-accumulation. Erosion-dominated soil surfaces included rounded gravel and cobbles; in the interstices there were poorly-developed microbiotic crusts on sandy loam with low δ15N values near 0‰ that point toward microbial growth dependent on cyanobacterial N2 fixation. Nutrients regenerated by heterotrophic bacteria may have been eroded from the system, providing a positive feedback for N2 fixation. High scytonemin:chlorophyll a ratios suggest that cyanobacteria required enhanced protection from UV damage in these crusts. A similar increase in scytonemin:chlorophyll a ratio during soil crust rehydration experiments also points toward the importance of UV protection. Glycolipid:phospholipid ratios were lowest where N2 fixation was favored, however, suggesting that the cyanobacterial population was relatively small, possibly because of the metabolic cost of N2fixation. Microbiotic crusts on silt loam soils, on the other hand, had higher δ15N values between 3.5 and 7.8‰, consistent with heterotrophic growth and nutrient recycling. Lower scytonemin:chlorophyll a ratios suggest that relatively high photosynthetic activity was supported in

Concurrent and lagged impacts of an anomalously warm year on autotrophic and heterotrophic components of soil respiration: a deconvolution analysis.

Science.gov (United States)

Zhou, Xuhui; Luo, Yiqi; Gao, Chao; Verburg, Paul S J; Arnone, John A; Darrouzet-Nardi, Anthony; Schimel, David S

2010-07-01

*Partitioning soil respiration into autotrophic (R(A)) and heterotrophic (R(H)) components is critical for understanding their differential responses to climate warming. *Here, we used a deconvolution analysis to partition soil respiration in a pulse warming experiment. We first conducted a sensitivity analysis to determine which parameters can be identified by soil respiration data. A Markov chain Monte Carlo technique was then used to optimize those identifiable parameters in a terrestrial ecosystem model. Finally, the optimized parameters were employed to quantify R(A) and R(H) in a forward analysis. *Our results displayed that more than one-half of parameters were constrained by daily soil respiration data. The optimized model simulation showed that warming stimulated R(H) and had little effect on R(A) in the first 2 months, but decreased both R(H) and R(A) during the remainder of the treatment and post-treatment years. Clipping of above-ground biomass stimulated the warming effect on R(H) but not on R(A). Overall, warming decreased R(A) and R(H) significantly, by 28.9% and 24.9%, respectively, during the treatment year and by 27.3% and 33.3%, respectively, during the post-treatment year, largely as a result of decreased canopy greenness and biomass. *Lagged effects of climate anomalies on soil respiration and its components are important in assessing terrestrial carbon cycle feedbacks to climate warming.

Are variations in heterotrophic soil respiration related to changes in substrate availability and microbial biomass carbon in the subtropical forests?

Science.gov (United States)

Wei, Hui; Chen, Xiaomei; Xiao, Guoliang; Guenet, Bertrand; Vicca, Sara; Shen, Weijun

2015-01-01

Soil temperature and moisture are widely-recognized controlling factors on heterotrophic soil respiration (Rh), although they often explain only a portion of Rh variability. How other soil physicochemical and microbial properties may contribute to Rh variability has been less studied. We conducted field measurements on Rh half-monthly and associated soil properties monthly for two years in four subtropical forests of southern China to assess influences of carbon availability and microbial properties on Rh. Rh in coniferous forest was significantly lower than that in the other three broadleaf species-dominated forests and exhibited obvious seasonal variations in the four forests (P < 0.05). Temperature was the primary factor influencing the seasonal variability of Rh while moisture was not in these humid subtropical forests. The quantity and decomposability of dissolved organic carbon (DOC) were significantly important to Rh variations, but the effect of DOC content on Rh was confounded with temperature, as revealed by partial mantel test. Microbial biomass carbon (MBC) was significantly related to Rh variations across forests during the warm season (P = 0.043). Our results suggest that DOC and MBC may be important when predicting Rh under some conditions, and highlight the complexity by mutual effects of them with environmental factors on Rh variations. PMID:26670822

Macroalgal blooms favor heterotrophic diazotrophic bacteria in nitrogen-rich and phosphorus-limited coastal surface waters in the Yellow Sea

Science.gov (United States)

Zhang, Xiaoli; Song, Yanjing; Liu, Dongyan; Keesing, John K.; Gong, Jun

2015-09-01

Macroalgal blooms may lead to dramatic changes in physicochemical variables and biogeochemical cycling in affected waters. However, little is known about the effects of macroalgal blooms on marine bacteria, especially those functioning in nutrient cycles. We measured environmental factors and investigated bacterial diazotrophs in two niches, surface waters that were covered (CC) and non-covered (CF) with massive macroalgal canopies of Ulva prolifera, in the Yellow Sea in the summer of 2011 using real-time PCR and clone library analysis of nifH genes. We found that heterotrophic diazotrophs (Gammaproteobacteria) dominated the communities and were mostly represented by Vibrio-related phylotypes in both CC and CF. Desulfovibrio-related phylotypes were only detected in CC. There were significant differences in community composition in these two environments (p diazotrophic abundance and community composition and that vibrios and Desulfovibrio-related heterotrophic diazotrophs adapt well to the (N-rich but P-limited) environment during blooming. Potential ecological and microbiological mechanisms behind this scenario are discussed.

Influence of heterotrophic microbial growth on biological oxidation of pyrite

Energy Technology Data Exchange (ETDEWEB)

Marchand, E.A.; Silverstein, J. [University of Nevada, Reno, NV (United States). Dept. of Civil Engineering

2002-12-15

Experiments were carried out to examine the possibility that enhanced growth of heterotrophic (non-iron-oxidising) bacteria would inhibit pyrite oxidation by Acidithiobacillus ferroxidans by out-competing the more slowly growing autotrophs for oxygen, nutrients or even attachment sites on the mineral surface. Glucose was added to microcosms containing pyrite, acidic mineral solution and cultures of A-ferrooxidans and Acidiphilium acidophilus under various experimental conditions. Results suggest that encouraging the growth of heterotrophic microorganisms under acid mine drainage conditions may be a feasible strategy for decreasing both the rate and the extent of sulfide mineral oxidation. 43 refs., 8 figs., 3 tabs.

Radiocarbon dating of magnetic and non magnetic soil fractions as a method to estimate the heterotrophic component of soil respiration in a primary forest of Ghana.

Science.gov (United States)

Chiti, T.; Certini, G.; Marzaioli, F.; Valentini, R.

2012-04-01

We estimated the heterotrophic component (Rh) of soil respiration in a primary forest of Ghana by radiocarbon dating, a method we already successfully applied in temperate and Mediterranean forests. In this case, given the advanced stage of alteration of tropical soils, which are thus rich in oxides, we implemented the method on soil fractions obtained by High Gradient Magnetic Separation (HGMS), hence based on different degrees of magnetic susceptibility. In particular, we separated an organic pool associated with magnetic minerals (e.g iron oxides) from an organic pool engaged with non-magnetic minerals. This non destructive method of fractionation, often applied to the finest fraction of soil (clay), is here attempted on the bulk fine earth (sieved at 2 mm and further at 0.5 mm ,so as to have two size fractions: 2 to 0.5 mm and aggregates. Surprisingly, the non magnetic fraction is not influenced at all by the bomb C (negative delta 14) already at a depth of 5-15 cm and, even, at 15-30 cm all the four fractions have pre-bomb C, which means relatively high radiocarbon age. The finest fractions are the main contributors to the Rh flux, particularly the magnetic fraction (analysis of the bulk soil alone, and only by means of a SOC fractionation the Rh flux can be estimated quite accurately. This alternative approach for estimating the Rh component of CO2 from soils of tropical areas is currently being applied in 10 tropical forest sites in western and central Africa in the context of the ERC Africa GHG project, and together with measurements of the C inputs annually entering the soil will allow determining the sink-source capacity of primary forest soils.

Evaluation on the microbial interactions of anaerobic ammonium oxidizers and heterotrophs in Anammox biofilm

DEFF Research Database (Denmark)

Ni, Bing-Jie; Ruscalleda, Mael; Smets, Barth F.

2012-01-01

and the affecting factors were evaluated with both experimental and modeling approaches. Fluorescent in situ hybridization (FISH) analysis illustrated that Anammox bacteria and heterotrophs accounted for 77% and 23% of the total bacteria, respectively, even without addition of an external carbon source....... Experimental results showed the heterotrophs could grow both on SMP and decay released substrate from the metabolism of the Anammox bacteria. However, heterotrophic growth in Anammox biofilm (23%) was significantly lower than that of nitrifying biofilm (30–50%). The model predictions matched well...... with the experimental observations of the bacterial distribution, as well as the nitrogenous transformations in batch and continuous experiments. The modeling results showed that low nitrogen surface loading resulted in a lower availability of SMP leading to low heterotrophic growth in Anammox biofilm, but high...

Reducing Uncertainty in the Daycent Model of Heterotrophic Respiration with a More Mechanistic Representation of Microbial Processes.

Science.gov (United States)

Berardi, D.; Gomez-Casanovas, N.; Hudiburg, T. W.

2017-12-01

Improving the certainty of ecosystem models is essential to ensuring their legitimacy, value, and ability to inform management and policy decisions. With more than a century of research exploring the variables controlling soil respiration, a high level of uncertainty remains in the ability of ecosystem models to accurately estimate respiration with changing climatic conditions. Refining model estimates of soil carbon fluxes is a high priority for climate change scientists to determine whether soils will be carbon sources or sinks in the future. We found that DayCent underestimates heterotrophic respiration by several magnitudes for our temperate mixed conifer forest site. While traditional ecosystem models simulate decomposition through first order kinetics, recent research has found that including microbial mechanisms explains 20 percent more spatial heterogeneity. We manipulated the DayCent heterotrophic respiration model to include a more mechanistic representation of microbial dynamic and compared the new model with continuous and survey observations from our experimental forest site in the Northern Rockies ecoregion. We also calibrated the model's sensitivity to soil moisture and temperature to our experimental data. We expect to improve the accuracy of the model by 20-30 percent. By using a more representative and calibrated model of soil carbon dynamics, we can better predict feedbacks between climate and soil carbon pools.

Partitioning soil CO2 fluxes by tree-girdling in a Mediterranean (Pinus pinaster) ecosystem reveals a different response of autotrophic and heterotrophic components to environmental variables and photosynthesis under drought conditions

Science.gov (United States)

Matteucci, M.; Cescatti, A.; Gruening, C.; Ballarin, I. G.; Guenther, S.; Magnani, F.; Nali, C.; Lorenzini, G.

2012-04-01

The response of ecosystems to environmental factors, such as temperature and rainfall, is crucial to understand the impact of climate change on the terrestrial C cycle. Forest soil respiration represents the main pathway by which photosynthetically assimilated C is released to atmosphere; its intensity depends not only on soil environmental conditions, but also on the availability of organic substrates respired by roots and microorganisms. Several techniques have been applied to partition the autotrophic and heterotrophic components of soil respiration in boreal and temperate forests; there is a general lack of information, on the contrary, on the dynamics of soil CO2 efflux in Mediterranean ecosystems. The IPCC A1B scenario highlighted the importance of the Mediterranean area since it is expected to experience a temperature increase (from 2.2 °C to 5.1 °C) and a rainfall reduction ranging from -4 to -27% on annual basis. We used the tree-girdling technique together with periodic chamber-based measurements to study the partitioning of total soil respiration (Rs) into its autotrophic (Ra) and heterotrophic (Rh) components in a 60-year old forest in Central Italy (San Rossore) dominated by Pinus pinaster. This technique has been extensively used to block the flux of photosynthates from leaves to roots, thus stopping the autotrophic root respiration in the soil. We found that two weeks after the treatment soil respiration in the girdled plots decreased by 29% and remained stable over the period of analysis, suggesting that Rh dominates total soil respiration. The anomalous low rainfall regimen of May to October 2011 (102 mm cumulated rain) associated with average air temperatures (with a mean value of 19,6 °C over the period) gave us the opportunity to investigate the decoupled response of soil respiration to water and temperature. Time series analysis performed under this severe drought conditions showed overall low values of soil respiration with three clear

Tolerance of soil flagellates to increased NaCl levels

DEFF Research Database (Denmark)

Ekelund, Flemming

2002-01-01

The ability of heterotrophic flagellates to survive and adapt to increasing salinities was investigated in this study. Whole soil samples were subjected to salinities corresponding to marine conditions and clonal cultures were used to perform growth and adaptation experiments at a wide range...... of different salinities (0-50 ppm). More morphotypes tolerant to elevated NaCl levels were found in road verge soil that was heavily exposed to de-icing salt than in less exposed soils, though there were fewer tolerant than intolerant morphotypes in all soils examined. Heterotrophic flagellates isolated...... on a freshwater medium from a non-exposed soil were unable to thrive at salinities above 15 ppt, and showed reduced growth rates even at low salt salinities (1-5 ppt). The findings suggest that heterotrophic soil flagellates are less tolerant to NaCl than their aquatic relatives, possibly due to their long...

Decadal warming causes a consistent and persistent shift from heterotrophic to autotrophic respiration in contrasting permafrost ecosystems

NARCIS (Netherlands)

Hicks Pries, C.E.; van Logtestijn, R.S.P; Schuur, E.A.G.; Natali, S.M.; Cornelissen, J.H.C.; Aerts, R.; Dorrepaal, E.

2015-01-01

Soil carbon in permafrost ecosystems has the potential to become a major positive feedback to climate change if permafrost thaw increases heterotrophic decomposition. However, warming can also stimulate autotrophic production leading to increased ecosystem carbon storage-a negative climate change

Warming Effects on Enzyme Activities are Predominant in Sub-surface Soils of an Arctic Tundra Ecosystem over 6-Year Field Manipulation

Science.gov (United States)

Kang, H.; Seo, J.; Kim, M.; Jung, J. Y.; Lee, Y. K.

2017-12-01

Arctic tundra ecosystems are of great importance because they store a large amount of carbon as un-decomposed organic matter. Global climate change is expected to affect enzyme activities and heterotrophic respiration in Arctic soils, which may accelerate greenhouse gas (GHG) emission through positive biological feedbacks. Unlike laboratory-based incubation experiments, field measurements often show different warming effects on decomposition of organic carbon and releases of GHGs. In the present study, we conducted a field-based warming experiment in Cambridge Bay, Canada (69°07'48″N, 105°03'36″W) by employing passive chambers during growing seasons over 6 years. A suite of enzyme activities (ß-glucosidase, cellobiohydrolase, N-acetylglucosaminidase, leucine aminopeptidase and phenol oxidase), microbial community structure (NGS), microbial abundances (gene copy numbers of bacteria and fungi), and soil chemical properties have been monitored in two depths (0-5 cm and 5-10 cm) of tundra soils, which were exposed to four different treatments (`control', `warming-only', `water-addition only', and both `warming and water-addition'). Phenol oxidase activity increased substantially, and bacterial community structure and abundance changed in the early stage (after 1 year's warming manipulation), but these changes disappeared afterwards. Most hydrolases were enhanced in surface soils by `water-addition only' over the period. However, the long-term effects of warming appeared in sub-surface soils where both `warming only' and `warming and water addition' increased hydrolase activities. Overall results of this study indicate that the warming effects on enzyme activities in surface soils are only short-term (phenol oxidase) or masked by water-limitation (hydrolases). However, hydrolases activities in sub-surface soils are more strongly enhanced than surface soils by warming, probably due to the lack of water limitation. Meanwhile, negative correlations between hydrolase

[Progress of heterotrophic studies on symbiotic corals].

Science.gov (United States)

Yang, Yang-Chu-Qiao; Hong, Wen Ting; Wang, Shu Hong

2017-12-01

Heterotrophy of zooxanthellae symbiotic corals refers to the nutrition directly coming from food absorption, not the nutrition obtained from photosynthesis. Most ex situ propagation of symbiotic corals focused on the effects of irradiation, flow rate and water quality on corals, few of them involved in the demand and supply of coral heterotrophic nutrition. This paper reviewed the significance of heterotrophic nutrient supply to symbiotic corals from the sources of coral heterotrophic nutrition, the factors affecting the supply of coral heterotrophic nutrient, and the methods of how to study the coral heterotrophy. In general, the research of coral heterotrophy is just at the beginning stage, and future studies should focus on the inherent mechanism of coral feeding selection and developing more effective research methods.

Survival of marine heterotrophic flagellates isolated from the surface and the deep sea at high hydrostatic pressure: Literature review and own experiments

Science.gov (United States)

Živaljić, Suzana; Schoenle, Alexandra; Nitsche, Frank; Hohlfeld, Manon; Piechocki, Julia; Reif, Farina; Shumo, Marwa; Weiss, Alexandra; Werner, Jennifer; Witt, Madeleine; Voss, Janine; Arndt, Hartmut

2018-02-01

Although the abyssal seafloor represents the most common benthic environment on Earth, eukaryotic microbial life at abyssal depths is still an uncharted territory. This is in striking contrast to their potential importance regarding the material flux and bacteria consumption in the deep sea. Flagellate genotypes determined from sedimentary DNA deep-sea samples might originate from vital deep-sea populations or from cysts of organisms sedimented down from surface waters. The latter one may have never been active under deep-sea conditions. We wanted to analyze the principal ability of cultivable heterotrophic flagellates of different phylogenetic groups (choanoflagellates, ancyromonads, euglenids, kinetoplastids, bicosoecids, chrysomonads, and cercozoans) to survive exposure to high hydrostatic pressure (up to 670 bar). We summarized our own studies and the few available data from literature on pressure tolerances of flagellates isolated from different marine habitats. Our results demonstrated that many different flagellate species isolated from the surface waters and deep-sea sediments survived drastic changes in hydrostatic pressure. Barophilic behavior was also recorded for several species isolated from the deep sea indicating their possible genetic adaptation to high pressures. This is in accordance with records of heterotrophic flagellates present in environmental DNA surveys based on clone libraries established for deep-sea environments.

Effects of Atrazine on Soil Microorganisms

Directory of Open Access Journals (Sweden)

Ljiljana Radivojević

2006-01-01

Full Text Available Effects of the herbicide atrazine on soil microorganisms was investigated. Trials were set up in laboratory, on a clay loam soil. Atrazine was applied at 8.0, 40.0 and 80.0 mg/kg soil rates. The abundance of total microorganisms, fungi, actinomycetes, cellulolytic microorganisms and amino-heterotrophs was recorded. Soil samples were collected 1, 7, 14, 21, 30 and 60 days after atrazine treatment for microbiological analyses.The results showed that the intensity of atrazine effect on soil microorganisms depended on treatment rate, exposure time and group of microorganisms. Atrazine had an inhibiting effect on cellulolytic microorganisms and amino-heterotrophs. Initially, it inhibited fungiand actinomycetes but its effect turned into a stimulating one once a population recovered. Atrazine had a stimulating effect on total abundance of microorganisms.

The Biology of Heterotrophic N2-fixing Bacteria in Marine and Estuarine Waters

DEFF Research Database (Denmark)

Bentzon-Tilia, Mikkel

Biological nitrogen (N)2 fixation is of paramount importance for marine N cycling and for life in the oceans in general. It represents the sole mechanism by which microorganisms can channel inert atmospheric N2 gas into biomass and hence it may fuel a significant fraction of primary production...... heterotrophic isolates, this thesis aims at addressing these unknowns. It was found that heterotrophic diazotrophs were present and active in environments previously not associated with N2 fixation e.g. suboxic basins of the Baltic Sea and estuarine surface waters. In these environments they contributed...... with significant amounts fixed N2, suggesting that a reevaluation of the significance of N fixation in suboxic waters and estuarine coastal waters is warranted. It was also documented that heterotrophic diazotrophs could be enriched in culture based on their ability to utilize N2 as the sole N source...

Nitrogen isotope ratios in surface and sub-surface soil horizons

International Nuclear Information System (INIS)

Rennie, D.A.; Paul, E.A.

1975-01-01

Nitrogen isotope analysis of surface soils and soil-derived nitrate for selected chernozemic and luvisolic soils showed mean delta 15 N values of 11.7 and 11.3, respectively. Isotope enrichment of the total N reached a maximum in the lower B horizon. Sub-soil parent material samples from the one deep profile included in the study indicated a delta 15 N value (NO 3 -N) of 1/3 that of the Ap horizon, at a depth of 180 cm. The delta 15 N of sub-surface soil horizons containing residual fertilizer N were low (-2.2) compared to the surface horizon (9.9). The data reported from this preliminary survey suggest that the natural variations in 15 N abundance between different soils and horizons of the same soil reflect the cumulative effects of soil genesis and soil management. More detailed knowledge and understanding of biological and other processes which control N isotope concentrations in these soils must be obtained before the data reported can be interpreted. (author)

Human Effects and Soil Surface CO2 fluxes in Tropical Urban Green Areas, Singapore

Science.gov (United States)

Ng, Bernard; Gandois, Laure; Kai, Fuu Ming; Chua, Amy; Cobb, Alex; Harvey, Charles; Hutyra, Lucy

2013-04-01

Urban green spaces are appreciated for their amenity value, with increasing interest in the ecosystem services they could provide (e.g. climate amelioration and increasingly as possible sites for carbon sequestration). In Singapore, turfgrass occupies approximately 20% of the total land area and is readily found on both planned and residual spaces. This project aims at understanding carbon fluxes in tropical urban green areas, including controls of soil environmental factors and the effect of urban management techniques. Given the large pool of potentially labile carbon, management regimes are recognised to have an influence on soil environmental factors (temperature and moisture), this would affect soil respiration and feedbacks to the greenhouse effect. A modified closed dynamic chamber method was employed to measure total soil respiration fluxes. In addition to soil respiration rates, environmental factors such as soil moisture and temperature, and ambient air temperature were monitored for the site in an attempt to evaluate their control on the observed fluxes. Measurements of soil-atmosphere CO2 exchanges are reported for four experimental plots within the Singtel-Kranji Radio Transmission Station (103o43'49E, 1o25'53N), an area dominated by Axonopus compressus. Different treatments such as the removal of turf, and application of clippings were effected as a means to determine the fluxes from the various components (respiration of soil and turf, and decomposition of clippings), and to explore the effects of human intervention on observed effluxes. The soil surface CO2 fluxes observed during the daylight hours ranges from 2.835 + 0.772 umol m-2 s-1 for the bare plot as compared to 6.654 + 1.134 umol m-2 s-1 for the turfed plot; this could be attributed to both autotrophic and heterotrophic respiration. Strong controls of both soil temperature and soil moisture are observed on measured soil fluxes. On the base soils, fluxes were positively correlated to soil

Novel insight into the role of heterotrophic dinoflagellates in the fate of crude oil in the sea

Science.gov (United States)

Almeda, Rodrigo; Connelly, Tara L.; Buskey, Edward J.

2014-12-01

Although planktonic protozoans are likely to interact with dispersed crude oil after a spill, protozoan-mediated processes affecting crude oil pollution in the sea are still not well known. Here, we present the first evidence of ingestion and defecation of physically or chemically dispersed crude oil droplets (1-86 μm in diameter) by heterotrophic dinoflagellates, major components of marine planktonic food webs. At a crude oil concentration commonly found after an oil spill (1 μL L-1), the heterotrophic dinoflagellates Noctiluca scintillans and Gyrodinium spirale grew and ingested ~0.37 μg-oil μg-Cdino-1 d-1, which could represent ~17% to 100% of dispersed oil in surface waters when heterotrophic dinoflagellates are abundant or bloom. Egestion of faecal pellets containing crude oil by heterotrophic dinoflagellates could contribute to the sinking and flux of toxic petroleum hydrocarbons in coastal waters. Our study indicates that crude oil ingestion by heterotrophic dinoflagellates is a noteworthy route by which petroleum enters marine food webs and a previously overlooked biological process influencing the fate of crude oil in the sea after spills.

Deterioration study of a material for encapsulation of radioactive wastes, the Portland cement, by heterotrophic microorganisms isolated from natural media

International Nuclear Information System (INIS)

Perfettini, J.

1989-01-01

Soils and geologic formations selected for storage of radioactive waste storage contain microflora (nitrifying and sulfoxidizing bacteria, heterotrophic microorganisms) that can corrode cement through acidic metabolism products. Nutriments required for their development are also found in these biotopes. Corrosine effects of organic acids produced by heterotrophic microorganisms are: mass decrease, leaching (especially Ca), dissolution of portlandite crystals Ca (OH) 2 , increase of porosity and decrease of flexural strength. Excretion of corrosive organic acids by bacteria is promoted by high temperature and basic pH. Acidification by fungi requires also a high temperature but an acidic pH [fr

Antagonistic interactions between filamentous heterotrophs and the cyanobacterium Nostoc muscorum

Directory of Open Access Journals (Sweden)

Wolf Sarah

2011-09-01

Full Text Available Abstract Background Little is known about interactions between filamentous heterotrophs and filamentous cyanobacteria. Here, interactions between the filamentous heterotrophic bacteria Fibrella aestuarina (strain BUZ 2 and Fibrisoma limi (BUZ 3 with an axenic strain of the autotrophic filamentous cyanobacterium Nostoc muscorum (SAG 25.82 were studied in mixed cultures under nutrient rich (carbon source present in medium and poor (carbon source absent in medium conditions. Findings F. aestuarina BUZ 2 significantly reduced the cyanobacterial population whereas F. limi BUZ 3 did not. Physical contact between heterotrophs and autotroph was observed and the cyanobacterial cells showed some level of damage and lysis. Therefore, either contact lysis or entrapment with production of extracellular compounds in close vicinity of host cells could be considered as potential modes of action. The supernatants from pure heterotrophic cultures did not have an effect on Nostoc cultures. However, supernatant from mixed cultures of BUZ 2 and Nostoc had a negative effect on cyanobacterial growth, indicating that the lytic compounds were only produced in the presence of Nostoc. The growth and survival of tested heterotrophs was enhanced by the presence of Nostoc or its metabolites, suggesting that the heterotrophs could utilize the autotrophs and its products as a nutrient source. However, the autotroph could withstand and out-compete the heterotrophs under nutrient poor conditions. Conclusions Our results suggest that the nutrients in cultivation media, which boost or reduce the number of heterotrophs, were the important factor influencing the outcome of the interplay between filamentous heterotrophs and autotrophs. For better understanding of these interactions, additional research is needed. In particular, it is necessary to elucidate the mode of action for lysis by heterotrophs, and the possible defense mechanisms of the autotrophs.

Mixotrophic organisms become more heterotrophic with rising temperature

NARCIS (Netherlands)

Wilken, S.; Huisman, J.; Naus-Wiezer, S.; van Donk, E.

2013-01-01

The metabolic theory of ecology predicts that temperature affects heterotrophic processes more strongly than autotrophic processes. We hypothesized that this differential temperature response may shift mixotrophic organisms towards more heterotrophic nutrition with rising temperature. The hypothesis

Can we distinguish autotrophic respiration from heterotrophic respiration in a field site using high temporal resolution CO2 flux measurements?

Science.gov (United States)

Biro, Beatrice; Berger, Sina; Praetzel, Leandra; Blodau, Christian

2016-04-01

The processes behind C-cycling in peatlands are important to understand for assessing the vulnerability of peatlands as carbon sinks under changing climate conditions. Especially boreal peatlands are likely to underlie strong alterations in the future. It is expected that C-pools that are directly influenced by vegetation and water table fluctuations can be easily destabilized. The CO2 efflux through respiration underlies autotrophic and heterotrophic processes that show different feedbacks on changing environmental conditions. In order to understand the respiration fluxes better for more accurate modelling and prognoses, the determination of the relative importance of different respiration sources is necessary. Earlier studies used e.g. exfoliation experiments, incubation experiments or modelling approaches to estimate the different respiration sources for the total ecosystem respiration (Reco). To further the understanding in this topic, I want to distinguish autotrophic and heterotrophic respiration using high temporal resolution measurements. The study site was selected along a hydrological gradient in a peatland in southern Ontario (Canada) and measurements were conducted from May to September 2015 once per month. Environmental controls (water table, soil temperature and soil moisture) that effect the respiration sources were recorded. In my study I used a Li-COR 6400XT and a Los Gatos greenhouse gas analyzer (GGA). Reco was determined by chamber flux measurements with the GGA, while simultaneously CO2 respiration measurements on different vegetation compartments like roots, leaves and mosses were conducted using the Li-COR 6400XT. The difference between Reco and autotrophic respiration equals heterotrophic respiration. After the measurements, the vegetation plots were harvested and separated for all compartments (leaves, roots, mosses, soil organic matter), dried and weighed. The weighted respiration rates from all vegetation compartments sum up to

Inclusion of Solar Elevation Angle in Land Surface Albedo Parameterization Over Bare Soil Surface.

Science.gov (United States)

Zheng, Zhiyuan; Wei, Zhigang; Wen, Zhiping; Dong, Wenjie; Li, Zhenchao; Wen, Xiaohang; Zhu, Xian; Ji, Dong; Chen, Chen; Yan, Dongdong

2017-12-01

Land surface albedo is a significant parameter for maintaining a balance in surface energy. It is also an important parameter of bare soil surface albedo for developing land surface process models that accurately reflect diurnal variation characteristics and the mechanism behind the solar spectral radiation albedo on bare soil surfaces and for understanding the relationships between climate factors and spectral radiation albedo. Using a data set of field observations, we conducted experiments to analyze the variation characteristics of land surface solar spectral radiation and the corresponding albedo over a typical Gobi bare soil underlying surface and to investigate the relationships between the land surface solar spectral radiation albedo, solar elevation angle, and soil moisture. Based on both solar elevation angle and soil moisture measurements simultaneously, we propose a new two-factor parameterization scheme for spectral radiation albedo over bare soil underlying surfaces. The results of numerical simulation experiments show that the new parameterization scheme can more accurately depict the diurnal variation characteristics of bare soil surface albedo than the previous schemes. Solar elevation angle is one of the most important factors for parameterizing bare soil surface albedo and must be considered in the parameterization scheme, especially in arid and semiarid areas with low soil moisture content. This study reveals the characteristics and mechanism of the diurnal variation of bare soil surface solar spectral radiation albedo and is helpful in developing land surface process models, weather models, and climate models.

Pesticide-soil microflora interactions in flooded rice soils

International Nuclear Information System (INIS)

Sethunathan, N.; Siddaramappa, R.; Siddarame Gowda, T.K.; Rajaram, K.P.; Barik, S.; Rao, V.R.

1976-01-01

Isotope studies revealed that gamma and beta isomers of HCH (hexachlorocyclohexane) decomposed rapidly in nonsterile soils capable of attaining redox potentials of -40 to -100mV within 20 days after flooding. Degradation was slow, however, in soils low in organic matter and in soils with extremely low pH and positive potentials, even after several weeks of flooding. Under flooded conditions, endrin decomposed to six metabolites in most soils. There is evidence that biological hydrolysis of parathion is more widespread than hitherto believed, particularly under flooded soil conditions. Applications of benomyl (fungicide) to a simulated-oxidized zone of flooded soils favoured heterotrophic nitrification. (author)

Partitioning of soil CO2 efflux in un-manipulated and experimentally flooded plots of a temperate fen

Science.gov (United States)

Wunderlich, S.; Borken, W.

2012-08-01

Peatlands store large amounts of organic carbon, but the carbon stock is sensitive to changes in precipitation or water table manipulations. Restoration of drained peatlands by drain blocking and flooding is a common measure to conserve and augment the carbon stock of peatland soils. Here, we report to what extent flooding affected the contribution of heterotrophic and rhizosphere respiration to soil CO2 efflux in a grass-dominated mountain fen in Germany. Soil CO2 efflux was measured in three un-manipulated control plots and three flooded plots in two consecutive years. Flooding was achieved by permanent irrigation during the growing seasons. Radiocarbon signatures of CO2 from different sources including soil CO2 efflux, incubated peat cores and live grass roots were repeatedly analyzed for partitioning of soil CO2 efflux. Additionally, heterotrophic respiration and its radiocarbon signature were determined by eliminating rhizosphere respiration in trenched subplots (only control). In the control plots, rhizosphere respiration determined by 14C signatures contributed between 47 and 61% during the growing season, but was small (4 ± 8%) immediately before budding. Trenching revealed a smaller rhizosphere contribution of 33 ± 8% (2009) and 22 ± 9% (2010) during growing seasons. Flooding reduced annual soil CO2 efflux of the fen by 42% in 2009 and by 30% in 2010. The reduction was smaller in 2010 mainly through naturally elevated water level in the control plots. A one-week interruption of irrigation caused a strong short-lived increase in soil CO2 efflux, demonstrating the sensitivity of the fen to water table drawdown near the peat surface. The reduction in soil CO2 efflux in the flooded plots diminished the relative proportion of rhizosphere respiration from 56 to 46%, suggesting that rhizosphere respiration was slightly more sensitive to flooding than heterotrophic respiration.

[Dynamic changes in soil respiration components and their regulating factors in the Moso bamboo plantation in subtropical China].

Science.gov (United States)

Yang, Wen-jia; Li, Yong-fu; Jiang, Pei-kun; Zhou, Guo-mo; Liu, Juan

2015-10-01

Dynamic changes (from April 2013 to March 2014) in soil respiration components were investigated by Li-8100 in the Moso bamboo plantation in Lin' an City, Zhejiang Province. Results showed that the average annual values for the soil total respiration rate, heterotrophic respiration rate, and autotrophic respiration rate in the Moso bamboo plantation were 2.93, 1.92 and 1.01 imol CO2 . m-2 . s-1, respectively. The soil respiration rate and its components exhibited strongly a seasonal dynamic pattern. The maximum appeared in July 2013, and the minimum appeared in January 2014. The annual cumulative CO2 emissions through soil respiration, heterotrophic respiration, and autotrophic respiration were 37.25, 24.61 and 12.64 t CO2 . hm-2 . a-1, respectively. The soil respiration and its components showed a close relation with soil temperature of 5 cm depth, and the corresponding Q10, values at 5 cm depth were 2.05, 1.95 and 2.34, respectively. Both the soil respiration and heterotrophic respiration were correlated to soil water soluble organic C (WSOC) content, but no significant relationship between autotrophic respiration and WSOC was observed. There were no significant relationships between soil respiration components and soil moisture content or microbial biomass C. The seasonal changes in soil respiration components in the Moso bamboo plantation were predominantly controlled by the soil temperature, and the soil WSOC content was an important environmental factor controlling total soil respiration and soil heterotrophic respiration.

Hydrological controls on heterotrophic soil respiration across an agricultural landscape

Science.gov (United States)

Water availability is an important determinant of variation in soil respiration, but a consistent relationship between soil water and the relative flux rate of carbon dioxide across different soil types remains elusive. Using large undisturbed soil columns (N = 12), we evaluated soil water controls...

Neutron probe measurement of soil water content close to soil surface

International Nuclear Information System (INIS)

Faleiros, M.C.; Ravelo S, A.; Souza, M.D. de

1993-01-01

The problem of neutron probe soil water content measurements close to soil surface is analysed from the spatial variability and also from the slow neutron loss to the atmosphere points of view. Results obtained on a dark red latosol of the county of Piracicaba, SP, indicate the possibility of precisely measuring the neutron sphere of influence when different media are used on soil surface. (author). 7 refs, 5 figs, 1 tab

Regulation of annual variation in heterotrophic bacterial production in the Schelde estuary (SW Netherlands)

NARCIS (Netherlands)

Goosen, N.K.; Van Rijswijk, P.; Kromkamp, J.C.; Peene, J.

1997-01-01

Heterotrophic bacterioplankton production (H-3-thymidine incorporation rate) and abundance in the surface water of the Schelde estuary (The Netherlands) were studied during an annual cycle in 1991 along the salinity gradient (0.8 to 33 psu). Bacterial production and numbers increased from the lower

Biotransformation of pharmaceuticals under nitrification, nitratation and heterotrophic conditions

International Nuclear Information System (INIS)

Fernandez-Fontaina, E.; Gomes, I.B.; Aga, D.S.; Omil, F.; Lema, J.M.; Carballa, M.

2016-01-01

The effect of nitrification, nitratation and heterotrophic conditions on the biotransformation of several pharmaceuticals in a highly enriched nitrifying activated sludge was evaluated in this study by selective activation of ammonia oxidizing bacteria (AOB), nitrite oxidizing bacteria (NOB) and heterotrophic bacteria. Nitrifiers displayed a noticeable capacity to process ibuprofen due to hydroxylation by ammonia monooxygenase (AMO) to produce 2-hydroxy-ibuprofen. Naproxen was also biotransformed under nitrifying conditions. On the other hand, heterotrophic bacteria present in the nitrifying activated sludge (NAS) biotransformed sulfamethoxazole. In contrast, both nitrifying and heterotrophic activities were ineffective against diclofenac, diazepam, carbamazepine and trimethoprim. Similar biotransformation rates of erythromycin, roxithromycin and fluoxetine were observed under all conditions tested. Overall, results from this study give more evidence on the role of the different microbial communities present in activated sludge reactors on the biological removal of pharmaceuticals. - Highlights: • The removal of pharmaceuticals in nitrifying activated sludge (NAS) was studied. • Nitrifying activity increases biotransformation rate of ibuprofen and naproxen. • Hydroxylation of ibuprofen by ammonia monooxygenase of ammonia oxidizing bacteria • Heterotrophic activity enhances biotransformation of sulfamethoxazole in NAS. • Recalcitrance of trimethoprim, diclofenac, carbamazepine and diazepam in NAS

Biotransformation of pharmaceuticals under nitrification, nitratation and heterotrophic conditions

Energy Technology Data Exchange (ETDEWEB)

Fernandez-Fontaina, E., E-mail: eduardo.fernandez.fontaina@usc.es [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain); Gomes, I.B. [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain); Aga, D.S. [Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260 (United States); Omil, F.; Lema, J.M.; Carballa, M. [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain)

2016-01-15

The effect of nitrification, nitratation and heterotrophic conditions on the biotransformation of several pharmaceuticals in a highly enriched nitrifying activated sludge was evaluated in this study by selective activation of ammonia oxidizing bacteria (AOB), nitrite oxidizing bacteria (NOB) and heterotrophic bacteria. Nitrifiers displayed a noticeable capacity to process ibuprofen due to hydroxylation by ammonia monooxygenase (AMO) to produce 2-hydroxy-ibuprofen. Naproxen was also biotransformed under nitrifying conditions. On the other hand, heterotrophic bacteria present in the nitrifying activated sludge (NAS) biotransformed sulfamethoxazole. In contrast, both nitrifying and heterotrophic activities were ineffective against diclofenac, diazepam, carbamazepine and trimethoprim. Similar biotransformation rates of erythromycin, roxithromycin and fluoxetine were observed under all conditions tested. Overall, results from this study give more evidence on the role of the different microbial communities present in activated sludge reactors on the biological removal of pharmaceuticals. - Highlights: • The removal of pharmaceuticals in nitrifying activated sludge (NAS) was studied. • Nitrifying activity increases biotransformation rate of ibuprofen and naproxen. • Hydroxylation of ibuprofen by ammonia monooxygenase of ammonia oxidizing bacteria • Heterotrophic activity enhances biotransformation of sulfamethoxazole in NAS. • Recalcitrance of trimethoprim, diclofenac, carbamazepine and diazepam in NAS.

N2O production pathways in the subtropical acid forest soils in China

International Nuclear Information System (INIS)

Zhang Jinbo; Cai Zucong; Zhu Tongbin

2011-01-01

To date, N 2 O production pathways are poorly understood in the humid subtropical and tropical forest soils. A 15 N-tracing experiment was carried out under controlled laboratory conditions to investigate the processes responsible for N 2 O production in four subtropical acid forest soils (pH 2 O emission in the subtropical acid forest soils, being responsible for 56.1%, 53.5%, 54.4%, and 55.2% of N 2 O production, in the GC, GS, GB, and TC soils, respectively, under aerobic conditions (40%-52%WFPS). The heterotrophic nitrification (recalcitrant organic N oxidation) accounted for 27.3%-41.8% of N 2 O production, while the contribution of autotrophic nitrification was little in the studied subtropical acid forest soils. The ratios of N 2 O-N emission from total nitrification (heterotrophic+autotrophic nitrification) were higher than those in most previous references. The soil with the lowest pH and highest organic-C content (GB) had the highest ratio (1.63%), suggesting that soil pH-organic matter interactions may exist and affect N 2 O product ratios from nitrification. The ratio of N 2 O-N emission from heterotrophic nitrification varied from 0.02% to 25.4% due to soil pH and organic matter. Results are valuable in the accurate modeling of N2O production in the subtropical acid forest soils and global budget. - Highlights: → We studied N 2 O production pathways in subtropical acid forest soil under aerobic conditions. → Denitrification was the main source of N 2 O production in subtropical acid forest soils. → Heterotrophic nitrification accounted for 27.3%-41.8% of N 2 O production. → While, contribution of autotrophic nitrification to N 2 O production was little. → Ratios of N 2 O-N emission from nitrification were higher than those in most previous references.

The global distribution and dynamics of surface soil moisture

Science.gov (United States)

McColl, Kaighin A.; Alemohammad, Seyed Hamed; Akbar, Ruzbeh; Konings, Alexandra G.; Yueh, Simon; Entekhabi, Dara

2017-01-01

Surface soil moisture has a direct impact on food security, human health and ecosystem function. It also plays a key role in the climate system, and the development and persistence of extreme weather events such as droughts, floods and heatwaves. However, sparse and uneven observations have made it difficult to quantify the global distribution and dynamics of surface soil moisture. Here we introduce a metric of soil moisture memory and use a full year of global observations from NASA's Soil Moisture Active Passive mission to show that surface soil moisture--a storage believed to make up less than 0.001% of the global freshwater budget by volume, and equivalent to an, on average, 8-mm thin layer of water covering all land surfaces--plays a significant role in the water cycle. Specifically, we find that surface soil moisture retains a median 14% of precipitation falling on land after three days. Furthermore, the retained fraction of the surface soil moisture storage after three days is highest over arid regions, and in regions where drainage to groundwater storage is lowest. We conclude that lower groundwater storage in these regions is due not only to lower precipitation, but also to the complex partitioning of the water cycle by the surface soil moisture storage layer at the land surface.

Heterotrophic cultivation of microalgae for pigment production: A review.

Science.gov (United States)

Hu, Jianjun; Nagarajan, Dillirani; Zhang, Quanguo; Chang, Jo-Shu; Lee, Duu-Jong

Pigments (mainly carotenoids) are important nutraceuticals known for their potent anti-oxidant activities and have been used extensively as high end health supplements. Microalgae are the most promising sources of natural carotenoids and are devoid of the toxic effects associated with synthetic derivatives. Compared to photoautotrophic cultivation, heterotrophic cultivation of microalgae in well-controlled bioreactors for pigments production has attracted much attention for commercial applications due to overcoming the difficulties associated with the supply of CO 2 and light, as well as avoiding the contamination problems and land requirements in open autotrophic culture systems. In this review, the heterotrophic metabolic potential of microalgae and their uses in pigment production are comprehensively described. Strategies to enhance pigment production under heterotrophic conditions are critically discussed and the challenges faced in heterotrophic pigment production with possible alternative solutions are presented. Copyright © 2017 Elsevier Inc. All rights reserved.

Novel insight into the role of heterotrophic dinoflagellates in the fate of crude oil in the sea

DEFF Research Database (Denmark)

Almeda, Rodrigo; Connelly, Tara L.; Buskey, Edward J.

2014-01-01

Although planktonic protozoans are likely to interact with dispersed crude oil after a spill, protozoan-mediated processes affecting crude oil pollution in the sea are still not well known. Here, we present the first evidence of ingestion and defecation of physically or chemically dispersed crude...... to 0.37 mu g-oil mg-C-dino (-1) d(-1), which could represent similar to 17% to 100% of dispersed oil in surface waters when heterotrophic dinoflagellates are abundant or bloom. Egestion of faecal pellets containing crude oil by heterotrophic dinoflagellates could contribute to the sinking and flux...... of toxic petroleum hydrocarbons in coastal waters. Our study indicates that crude oil ingestion by heterotrophic dinoflagellates is a noteworthy route by which petroleum enters marine food webs and a previously overlooked biological process influencing the fate of crude oil in the sea after spills....

Transcriptional changes underlying elemental stoichiometry shifts in a marine heterotrophic bacterium

Directory of Open Access Journals (Sweden)

Leong-Keat eChan

2012-05-01

Full Text Available Marine bacteria drive the biogeochemical processing of oceanic dissolved organic carbon (DOC, a 750-Tg C reservoir that is a critical component of the global C cycle. Catabolism of DOC is thought to be regulated by the biomass composition of heterotrophic bacteria, as cells maintain a C:N:P ratio of ~50:10:1 during DOC processing. Yet a complicating factor in stoichiometry-based analyses is that bacteria can change the C:N:P ratio of their biomass in response to resource composition. We investigated the physiological mechanisms of resource-driven shifts in biomass stoichiometry in continuous cultures of the marine heterotrophic bacterium Ruegeria pomeroyi (a member of the Roseobacter clade under four element limitation regimes (C, N, P, and S. Microarray analysis indicated that the bacterium scavenged for alternate sources of the scarce element when cells were C-, N-, or P-limited; reworked the ratios of biomolecules when C- and P- limited; and exerted tighter control over import/export and cytoplasmic pools when N-limited. Under S-limitation, a scenario not existing naturally for surface ocean microbes, stress responses dominated transcriptional changes. Resource-driven changes in C:N ratios of up to 2.5-fold and in C:P ratios of up to 6-fold were measured in R. pomeroyi biomass. These changes were best explained if the C and P content of the cells was flexible in the face of shifting resources but N content was not, achieved through the net balance of different transcriptional strategies. The cellular-level metabolic trade-offs that govern biomass stoichiometery in R. pomeroyi may have implications for global carbon cycling. Strong homeostatic responses to N limitation by heterotrophic marine bacteria would intensify competition with autotrophs. Modification of cellular inventories in C- and P-limited heterotrophs would vary the elemental ratio of particulate organic matter sequestered in the deep ocean.

Soil fauna communities and microbial respiration in high Arctic tundra soils at Zackenberg, Northeast Greenland

DEFF Research Database (Denmark)

Sørensen, Louise I.; Holmstrup, Martin; Maraldo, Kristine

2006-01-01

The soil fauna communities were described for three dominant vegetation types in a high arctic site at Zackenberg, Northeast Greenland. Soil samples were extracted to quantify the densities of mites, collembolans, enchytraeids, diptera larvae, nematodes and protozoa. Rates of microbial respiration...... densities (naked amoeba and heterotrophic flagellates) were equal. Respiration rate of unamended soil was similar in soil from the three plots. However, a higher respiration rate increase in carbon + nutrient amended soil and the higher densities of soil fauna (with the exception of mites and protozoa...

Organic acid enhanced electrodialytic extraction of lead from contaminated soil fines in suspension

DEFF Research Database (Denmark)

Jensen, Pernille Erland; Ahring, Birgitte Kiær; Ottosen, Lisbeth M.

2007-01-01

for decontamination of the sludge was investigated. The ability of 11 organic acids to extract Pb from the fine fraction of contaminated soil (grains soil fines in suspension......The implementation of soil washing technology for the treatment of heavy metal contaminated soils is limited by the toxicity and unwieldiness of the remaining heavy metal contaminated sludge. In this work, the feasibility of combining electrodialytic remediation with heterotrophic leaching...... was tested. Five of the acids showed the ability to extract Ph from the soil fines in excess of the effect caused solely by pH changes. Addition of the acids, however, severely impeded EDR, hence promotion of EDR by combination with heterotrophic leaching was rejected. In contrast, enhancement of EDR...

Experimental study on soluble chemical transfer to surface runoff from soil.

Science.gov (United States)

Tong, Juxiu; Yang, Jinzhong; Hu, Bill X; Sun, Huaiwei

2016-10-01

Prevention of chemical transfer from soil to surface runoff, under condition of irrigation and subsurface drainage, would improve surface water quality. In this paper, a series of laboratory experiments were conducted to assess the effects of various soil and hydraulic factors on chemical transfer from soil to surface runoff. The factors include maximum depth of ponding water on soil surface, initial volumetric water content of soil, depth of soil with low porosity, type or texture of soil and condition of drainage. In the experiments, two soils, sand and loam, mixed with different quantities of soluble KCl were filled in the sandboxes and prepared under different initial saturated conditions. Simulated rainfall induced surface runoff are operated in the soils, and various ponding water depths on soil surface are simulated. Flow rates and KCl concentration of surface runoff are measured during the experiments. The following conclusions are made from the study results: (1) KCl concentration in surface runoff water would decrease with the increase of the maximum depth of ponding water on soil surface; (2) KCl concentration in surface runoff water would increase with the increase of initial volumetric water content in the soil; (3) smaller depth of soil with less porosity or deeper depth of soil with larger porosity leads to less KCl transfer to surface runoff; (4) the soil with finer texture, such as loam, could keep more fertilizer in soil, which will result in more KCl concentration in surface runoff; and (5) good subsurface drainage condition will increase the infiltration and drainage rates during rainfall event and will decrease KCl concentration in surface runoff. Therefore, it is necessary to reuse drained fertile water effectively during rainfall, without polluting groundwater. These study results should be considered in agriculture management to reduce soluble chemical transfer from soil to surface runoff for reducing non-point sources pollution.

Two-stage heterotrophic and phototrophic culture strategy for algal biomass and lipid production.

Science.gov (United States)

Zheng, Yubin; Chi, Zhanyou; Lucker, Ben; Chen, Shulin

2012-01-01

A two-stage heterotrophic and phototrophic culture strategy for algal biomass and lipid production was studied, wherein high density heterotrophic cultures of Chlorellasorokiniana serve as seed for subsequent phototrophic growth. The data showed growth rate, cell density and productivity of heterotrophic C.sorokiniana were 3.0, 3.3 and 7.4 times higher than phototrophic counterpart, respectively. Hetero- and phototrophic algal seeds had similar biomass/lipid production and fatty acid profile when inoculated into phototrophic culture system. To expand the application, food waste and wastewater were tested as feedstock for heterotrophic growth, and supported cell growth successfully. These results demonstrated the advantages of using heterotrophic algae cells as seeds for open algae culture system. Additionally, high inoculation rate of heterotrophic algal seed can be utilized as an effective method for contamination control. This two-stage heterotrophic phototrophic process is promising to provide a more efficient way for large scale production of algal biomass and biofuels. Copyright © 2011 Elsevier Ltd. All rights reserved.

Grass mulching effect on infiltration, surface runoff and soil loss of three agricultural soils in Nigeria.

Science.gov (United States)

Adekalu, K O; Olorunfemi, I A; Osunbitan, J A

2007-03-01

Mulching the soil surface with a layer of plant residue is an effective method of conserving water and soil because it reduces surface runoff, increases infiltration of water into the soil and retard soil erosion. The effectiveness of using elephant grass (Pennisetum purpureum) as mulching material was evaluated in the laboratory using a rainfall simulator set at rainfall intensities typical of the tropics. Six soil samples, two from each of the three major soil series representing the main agricultural soils in South Western Nigeria were collected, placed on three different slopes, and mulched with different rates of the grass. The surface runoff, soil loss, and apparent cumulative infiltration were then measured under each condition. The results with elephant grass compared favorably with results from previous experiments using rice straw. Runoff and soil loss decreased with the amount of mulch used and increased with slope. Surface runoff, infiltration and soil loss had high correlations (R = 0.90, 0.89, and 0.86, respectively) with slope and mulch cover using surface response analysis. The mean surface runoff was correlated negatively with sand content, while mean soil loss was correlated positively with colloidal content (clay and organic matter) of the soil. Infiltration was increased and soil loss was reduced greatly with the highest cover. Mulching the soils with elephant grass residue may benefit late cropping (second cropping) by increasing stored soil water for use during dry weather and help to reduce erosion on sloping land.

Some heterotrophic flagellates from a cultivated garden soil in Australia

DEFF Research Database (Denmark)

Ekelund, Flemming; Patterson, DJ

1997-01-01

The flagellates of an Australian garden soil were studied by placing coverslips on wet soil and subsequently examining the coverslips by light microscopy. A number of genera and species were found which have not previously been reported from soil samples. Besides the three new species, Apusomonas...

Effects of Refined Petroleum Hydrocarbon on Soil Physicochemical ...

African Journals Online (AJOL)

Nitrogen and phosphorous decreased from 0.15% to 0.07% and 35.1ppm to 10.88pm respectively while ammonium nitrate and nitrite were not affected in all soils. Calcium and potassium decreased beyond the control soil level in gasoline — contaminated soil after week 16. Counts of total viable aerobic heterotrophs ...

Using semi-variogram analysis for providing spatially distributed information on soil surface condition for land surface modeling

Science.gov (United States)

Croft, Holly; Anderson, Karen; Kuhn, Nikolaus J.

2010-05-01

The ability to quantitatively and spatially assess soil surface roughness is important in geomorphology and land degradation studies. Soils can experience rapid structural degradation in response to land cover changes, resulting in increased susceptibility to erosion and a loss of Soil Organic Matter (SOM). Changes in soil surface condition can also alter sediment detachment, transport and deposition processes, infiltration rates and surface runoff characteristics. Deriving spatially distributed quantitative information on soil surface condition for inclusion in hydrological and soil erosion models is therefore paramount. However, due to the time and resources involved in using traditional field sampling techniques, there is a lack of spatially distributed information on soil surface condition. Laser techniques can provide data for a rapid three dimensional representation of the soil surface at a fine spatial resolution. This provides the ability to capture changes at the soil surface associated with aggregate breakdown, flow routing, erosion and sediment re-distribution. Semi-variogram analysis of the laser data can be used to represent spatial dependence within the dataset; providing information about the spatial character of soil surface structure. This experiment details the ability of semi-variogram analysis to spatially describe changes in soil surface condition. Soil for three soil types (silt, silt loam and silty clay) was sieved to produce aggregates between 1 mm and 16 mm in size and placed evenly in sample trays (25 x 20 x 2 cm). Soil samples for each soil type were exposed to five different durations of artificial rainfall, to produce progressively structurally degraded soil states. A calibrated laser profiling instrument was used to measure surface roughness over a central 10 x 10 cm plot of each soil state, at 2 mm sample spacing. The laser data were analysed within a geostatistical framework, where semi-variogram analysis quantitatively represented

Spectral Assessment of Soil Properties: Standoff Quantification of Soil Organic Matter Content in Surface Mineral Soils and Alaskan Peat

Science.gov (United States)

2017-08-01

Soil Properties Standoff Quantification of Soil Organic Matter Content in Surface Mineral Soils and Alaskan Peat En gi ne er R es ea rc h an d D...ERDC 6.2 GRE ARTEMIS STO-R DRTSPORE ERDC TR-17-9 August 2017 Spectral Assessment of Soil Properties Standoff Quantification of Soil Organic...Matter Content in Surface Mineral Soils and Alaskan Peat Stacey L. Jarvis, Karen L. Foley, Robert M. Jones, Stephen D. Newman, and Robyn A. Barbato

Soil surface roughness decay in contrasting climates, tillage types and management systems

Science.gov (United States)

Vidal Vázquez, Eva; Bertol, Ildegardis; Tondello Barbosa, Fabricio; Paz-Ferreiro, Jorge

2014-05-01

Soil surface roughness describes the variations in the elevation of the soil surface. Such variations define the soil surface microrelief, which is characterized by a high spatial variability. Soil surface roughness is a property affecting many processes such as depression storage, infiltration, sediment generation, storage and transport and runoff routing. Therefore the soil surface microrelief is a key element in hydrology and soil erosion processes at different spatial scales as for example at the plot, field or catchment scale. In agricultural land soil surface roughness is mainly created by tillage operations, which promote to different extent the formation of microdepressions and microelevations and increase infiltration and temporal retention of water. The decay of soil surface roughness has been demonstrated to be mainly driven by rain height and rain intensity, and to depend also on runoff, aggregate stability, soil reface porosity and soil surface density. Soil roughness formation and decay may be also influenced by antecedent soil moisture (either before tillage or rain), quantity and type of plant residues over the soil surface and soil composition. Characterization of the rate and intensity of soil surface roughness decay provides valuable information about the degradation of the upper most soil surface layer before soil erosion has been initiated or at the very beginning of soil runoff and erosion processes. We analyzed the rate of decay of soil surface roughness from several experiments conducted in two regions under temperate and subtropical climate and with contrasting land use systems. The data sets studied were obtained both under natural and simulated rainfall for various soil tillage and management types. Soil surface roughness decay was characterized bay several parameters, including classic and single parameters such as the random roughness or the tortuosity and parameters based on advanced geostatistical methods or on the fractal theory. Our

A noncontact laser system for measuring soil surface topography

International Nuclear Information System (INIS)

Huang, C.; White, I.; Thwaite, E.G.; Bendeli, A.

1988-01-01

Soil surface topography profoundly influences runoff hydrodynamics, soil erosion, and surface retention of water. Here we describe an optical noncontact system for measuring soil surface topography. Soil elevation is measured by projecting a laser beam onto the surface and detecting the position of the interception point. The optical axis of the detection system is oriented at a small angle to the incident beam. A low-power HeNe (Helium-Neon) laser is used as the laser source, a photodiode array is used as the laser image detector and an ordinary 35-mm single lens reflex camera provides the optical system to focus the laser image onto the diode array. A wide spectrum of measurement ranges (R) and resolutions are selectable, from 1 mm to 1 m. These are determined by the laser-camera distance and angle, the focal length of the lens, and the sensing length of the diode array and the number of elements (N) contained in the array. The resolution of the system is approximately R/2N. We show for the system used here that this resolution is approximately 0.2%. In the configuration selected, elevation changes of 0.16 mm could be detected over a surface elevation range of 87 mm. The sampling rate of the system is 1000 Hz, which permits soil surfaces to be measured at speeds of up to 1 m s −1 with measurements taken at 1-mm spacing. Measurements of individual raindrop impacts on the soil and of soil surfaces before and after rain show the versatility of the laser surface profiler, which has applications in studies of erosion processes, surface storage and soil trafficability

Bacterial biomass and heterotrophic potential in the waters of the Chesapeake Bay plume and contiguous continental shelf

Science.gov (United States)

Kator, H. I.; Zubkoff, P. L.

1981-01-01

Seasonal baseline data on bacterial biomass and heterotrophic uptake in the Chesapeake Bay plume and contiguous Atlantic Ocean shelf waters are discussed. Viable count bacterial numbers in surface water samples collected during June 1980 ranged from a maximum of 190,000 MPN (most probable number)/ml at the Bay mouth to a minimum of 7900 MPN/ml offshore. Similarly, direct count densities ranged from 1,800,000 BU (bacterial units)/ml to 24,000 BU/ml. Heterotrophic potential (V max) was largest at the Bay mouth and lowest offshore. Biomass and V max values usually decreased with depth although subsurface maxima were occasionally observed at inshore stations. Correlation of biomass and heterotrophic potential data with selected hydrographic variables was determind with a nonparametric statistic. Results indicate viable counts are positively and significantly correlated with total chlorophyll, temperature, direct count and V max during June 1980; significant negative correlations are obtained with salinity and depth. Calculations of bacterial standing crop are discussed.

Soil Carbon Dioxide Production and Surface Fluxes: Subsurface Physical Controls

Science.gov (United States)

Risk, D.; Kellman, L.; Beltrami, H.

Soil respiration is a critical determinant of landscape carbon balance. Variations in soil temperature and moisture patterns are important physical processes controlling soil respiration which need to be better understood. Relationships between soil respi- ration and physical controls are typically addressed using only surface flux data but other methods also exist which permit more rigorous interpretation of soil respira- tion processes. Here we use a combination of subsurface CO_{2} concentrations, surface CO_{2} fluxes and detailed physical monitoring of the subsurface envi- ronment to examine physical controls on soil CO_{2} production at four climate observatories in Eastern Canada. Results indicate that subsurface CO_{2} produc- tion is more strongly correlated to the subsurface thermal environment than the surface CO_{2} flux. Soil moisture was also found to have an important influence on sub- surface CO_{2} production, particularly in relation to the soil moisture - soil profile diffusivity relationship. Non-diffusive profile CO_{2} transport appears to be im- portant at these sites, resulting in a de-coupling of summertime surface fluxes from subsurface processes and violating assumptions that surface CO_{2} emissions are the result solely of diffusion. These results have implications for the study of soil respiration across a broad range of terrestrial environments.

Soil hydraulic parameters and surface soil moisture of a tilled bare soil plot inversely derived from l-band brightness temperatures

KAUST Repository

Dimitrov, Marin

2014-01-01

We coupled a radiative transfer model and a soil hydrologic model (HYDRUS 1D) with an optimization routine to derive soil hydraulic parameters, surface roughness, and soil moisture of a tilled bare soil plot using measured brightness temperatures at 1.4 GHz (L-band), rainfall, and potential soil evaporation. The robustness of the approach was evaluated using five 28-d data sets representing different meteorological conditions. We considered two soil hydraulic property models: the unimodal Mualem-van Genuchten and the bimodal model of Durner. Microwave radiative transfer was modeled by three different approaches: the Fresnel equation with depth-averaged dielectric permittivity of either 2-or 5-cm-thick surface layers and a coherent radiative transfer model (CRTM) that accounts for vertical gradients in dielectric permittivity. Brightness temperatures simulated by the CRTM and the 2-cm-layer Fresnel model fitted well to the measured ones. L-band brightness temperatures are therefore related to the dielectric permittivity and soil moisture in a 2-cm-thick surface layer. The surface roughness parameter that was derived from brightness temperatures using inverse modeling was similar to direct estimates from laser profiler measurements. The laboratory-derived water retention curve was bimodal and could be retrieved consistently for the different periods from brightness temperatures using inverse modeling. A unimodal soil hydraulic property function underestimated the hydraulic conductivity near saturation. Surface soil moisture contents simulated using retrieved soil hydraulic parameters were compared with in situ measurements. Depth-specific calibration relations were essential to derive soil moisture from near-surface installed sensors. © Soil Science Society of America 5585 Guilford Rd., Madison, WI 53711 USA.

Soil-soil solution distribution coefficient of soil organic matter is a key factor for that of radioiodide in surface and subsurface soils.

Science.gov (United States)

Unno, Yusuke; Tsukada, Hirofumi; Takeda, Akira; Takaku, Yuichi; Hisamatsu, Shun'ichi

2017-04-01

We investigated the vertical distribution of the soil-soil-solution distribution coefficients (K d ) of 125 I, 137 Cs, and 85 Sr in organic-rich surface soil and organic-poor subsurface soil of a pasture and an urban forest near a spent-nuclear-fuel reprocessing plant in Rokkasho, Japan. K d of 137 Cs was highly correlated with water-extractable K + . K d of 85 Sr was highly correlated with water-extractable Ca 2+ and SOC. K d of 125 I - was low in organic-rich surface soil, high slightly below the surface, and lowest in the deepest soil. This kinked distribution pattern differed from the gradual decrease of the other radionuclides. The thickness of the high- 125 I - K d middle layer (i.e., with high radioiodide retention ability) differed between sites. K d of 125 I - was significantly correlated with K d of soil organic carbon. Our results also showed that the layer thickness is controlled by the ratio of K d -OC between surface and subsurface soils. This finding suggests that the addition of SOC might prevent further radioiodide migration down the soil profile. As far as we know, this is the first report to show a strong correlation of a soil characteristic with K d of 125 I - . Further study is needed to clarify how radioiodide is retained and migrates in soil. Copyright © 2017 Elsevier Ltd. All rights reserved.

Operational assimilation of ASCAT surface soil wetness at the Met Office

Directory of Open Access Journals (Sweden)

I. Dharssi

2011-08-01

Full Text Available Currently, no extensive, near real time, global soil moisture observation network exists. Therefore, the Met Office global soil moisture analysis scheme has instead used observations of screen temperature and humidity. A number of new space-borne remote sensing systems, operating at microwave frequencies, have been developed that provide a more direct retrieval of surface soil moisture. These systems are attractive since they provide global data coverage and the horizontal resolution is similar to weather forecasting models. Several studies show that measurements of normalised backscatter (surface soil wetness from the Advanced Scatterometer (ASCAT on the meteorological operational (MetOp satellite contain good quality information about surface soil moisture. This study describes methods to convert ASCAT surface soil wetness measurements to volumetric surface soil moisture together with bias correction and quality control. A computationally efficient nudging scheme is used to assimilate the ASCAT volumetric surface soil moisture data into the Met Office global soil moisture analysis. This ASCAT nudging scheme works alongside a soil moisture nudging scheme that uses observations of screen temperature and humidity. Trials, using the Met Office global Unified Model, of the ASCAT nudging scheme show a positive impact on forecasts of screen temperature and humidity for the tropics, North America and Australia. A comparison with in-situ soil moisture measurements from the US also indicates that assimilation of ASCAT surface soil wetness improves the soil moisture analysis. Assimilation of ASCAT surface soil wetness measurements became operational during July 2010.

Quantifying the changes of soil surface microroughness due to rainfall impact on a smooth surface

Directory of Open Access Journals (Sweden)

B. K. B. Abban

2017-09-01

Full Text Available This study examines the rainfall-induced change in soil microroughness of a bare smooth soil surface in an agricultural field. The majority of soil microroughness studies have focused on surface roughness on the order of ∼ 5–50 mm and have reported a decay of soil surface roughness with rainfall. However, there is quantitative evidence from a few studies suggesting that surfaces with microroughness less than 5 mm may undergo an increase in roughness when subject to rainfall action. The focus herein is on initial microroughness length scales on the order of 2 mm, a low roughness condition observed seasonally in some landscapes under bare conditions and chosen to systematically examine the increasing roughness phenomenon. Three rainfall intensities of 30, 60, and 75 mm h−1 are applied to a smoothened bed surface in a field plot via a rainfall simulator. Soil surface microroughness is recorded via a surface-profile laser scanner. Several indices are utilized to quantify the soil surface microroughness, namely the random roughness (RR index, the crossover length, the variance scale from the Markov–Gaussian model, and the limiting difference. Findings show a consistent increase in roughness under the action of rainfall, with an overall agreement between all indices in terms of trend and magnitude. Although this study is limited to a narrow range of rainfall and soil conditions, the results suggest that the outcome of the interaction between rainfall and a soil surface can be different for smooth and rough surfaces and thus warrant the need for a better understanding of this interaction.

Soil Structure - A Neglected Component of Land-Surface Models

Science.gov (United States)

Fatichi, S.; Or, D.; Walko, R. L.; Vereecken, H.; Kollet, S. J.; Young, M.; Ghezzehei, T. A.; Hengl, T.; Agam, N.; Avissar, R.

2017-12-01

Soil structure is largely absent in most standard sampling and measurements and in the subsequent parameterization of soil hydraulic properties deduced from soil maps and used in Earth System Models. The apparent omission propagates into the pedotransfer functions that deduce parameters of soil hydraulic properties primarily from soil textural information. Such simple parameterization is an essential ingredient in the practical application of any land surface model. Despite the critical role of soil structure (biopores formed by decaying roots, aggregates, etc.) in defining soil hydraulic functions, only a few studies have attempted to incorporate soil structure into models. They mostly looked at the effects on preferential flow and solute transport pathways at the soil profile scale; yet, the role of soil structure in mediating large-scale fluxes remains understudied. Here, we focus on rectifying this gap and demonstrating potential impacts on surface and subsurface fluxes and system wide eco-hydrologic responses. The study proposes a systematic way for correcting the soil water retention and hydraulic conductivity functions—accounting for soil-structure—with major implications for near saturated hydraulic conductivity. Modification to the basic soil hydraulic parameterization is assumed as a function of biological activity summarized by Gross Primary Production. A land-surface model with dynamic vegetation is used to carry out numerical simulations with and without the role of soil-structure for 20 locations characterized by different climates and biomes across the globe. Including soil structure affects considerably the partition between infiltration and runoff and consequently leakage at the base of the soil profile (recharge). In several locations characterized by wet climates, a few hundreds of mm per year of surface runoff become deep-recharge accounting for soil-structure. Changes in energy fluxes, total evapotranspiration and vegetation productivity

Divergent surface and total soil moisture projections under global warming

Science.gov (United States)

Berg, Alexis; Sheffield, Justin; Milly, Paul C.D.

2017-01-01

Land aridity has been projected to increase with global warming. Such projections are mostly based on off-line aridity and drought metrics applied to climate model outputs but also are supported by climate-model projections of decreased surface soil moisture. Here we comprehensively analyze soil moisture projections from the Coupled Model Intercomparison Project phase 5, including surface, total, and layer-by-layer soil moisture. We identify a robust vertical gradient of projected mean soil moisture changes, with more negative changes near the surface. Some regions of the northern middle to high latitudes exhibit negative annual surface changes but positive total changes. We interpret this behavior in the context of seasonal changes in the surface water budget. This vertical pattern implies that the extensive drying predicted by off-line drought metrics, while consistent with the projected decline in surface soil moisture, will tend to overestimate (negatively) changes in total soil water availability.

Effects of soil surface management practices on soil and tree ...

African Journals Online (AJOL)

Effects on soil, leaf and fruit element concentrations of organic (compost, straw mulch and hand weeding) and integrated (inorganic fertilisers and herbicide usage; IP) soil surface management practices in the tree rows, in combination with weed covers, cover crops and straw mulch in the work rows, were investigated in a ...

Heterotrophic free-living and particle-bound bacterial cell size in the ...

Indian Academy of Sciences (India)

PRAKASH

the heterotrophic bacterial cell size in the various water bodies studied in this investigation. The possible ... seasonal changes in abundance and cell size of heterotrophic ... data, 1995) physiological stress indicated by the presence of small ...

Overcoming soil compaction in surface mine reclamation

Energy Technology Data Exchange (ETDEWEB)

Sweigard, R.J. (University of Kentucky, Lexington, KY (USA). Dept. of Mining Engineering)

1991-01-01

Rubber-tyred soil reconstruction equipment causes compaction of soil and means surface mine operators cannot satisfy crop yield standards defined by the Surface Mining Control and Reclamation Act. Soil compaction can be overcome by either modifying the reconstruction process or alleviating the problem, for example by deep tillage, once it occurs. The Dept. of Mining Engineering at the Institute of Mining and Minerals Research is conducting a laboratory investigation into a method of injecting low density porous organic material into a bin containing soil at the same time as the soil is ripped. This should prevent voids collapsing when subjected to forces from farm equipment and natural sources. Soil analyses are performed before and after the injection. Ripping and injection with ground pecan shells had a residual effect on nuclear bulk density compared to the initially compacted case and also showed an improvement in hydraulic conductivity. Work is in progress on modifying the system to handle other injection material and should lead on to field tests on a prototype involving both soil analysis and crop yield determination. 1 fig.

Overcoming soil compaction in surface mine reclamation

International Nuclear Information System (INIS)

Sweigard, R.J.

1991-01-01

Rubber-tyred soil reconstruction equipment causes compaction of soil and means surface mine operators cannot satisfy crop yield standards defined by the Surface Mining Control and Reclamation Act. Soil compaction can be overcome by either modifying the reconstruction process or alleviating the problem, for example by deep tillage, once it occurs. The Dept. of Mining Engineering at the Institute of Mining and Minerals Research is conducting a laboratory investigation into a method of injecting low density porous organic material into a bin containing soil at the same time as the soil is ripped. This should prevent voids collapsing when subjected to forces from farm equipment and natural sources. Soil analyses are performed before and after the injection. Ripping and injection with ground pecan shells had a residual effect on nuclear bulk density compared to the initially compacted case and also showed an improvement in hydraulic conductivity. Work is in progress on modifying the system to handle other injection material and should lead on to field tests on a prototype involving both soil analysis and crop yield determination. 1 fig

Estimation of bare soil surface temperature from air temperature and ...

African Journals Online (AJOL)

Soil surface temperature has critical influence on climate, agricultural and hydrological activities since it serves as a good indicator of the energy budget of the earth's surface. Two empirical models for estimating soil surface temperature from air temperature and soil depth temperature were developed. The coefficient of ...

Effect of Sewage-Sludge on Bioremediation of a Crude-Oil Polluted Soil

Directory of Open Access Journals (Sweden)

Sara Sharifi Hosseini

2010-06-01

Full Text Available Khuzestan Province accommodates the largest oil-fields with huge petroleum production in Iran. During the Persian Gulf war in 1991, more than 6-8 million gallons of oil was spilt in the Persian Gulf, the greatest amount of which was transported into Khuzestan soil. Thus, oil removal from contaminated soil by advanced technologies such as bioremediation seems to be of vital necessity. The aim of this study was to evaluate the effect of sewage-sludge application on bioremediation of oil-contaminated soil. Soil samples (5kg were artificially contaminated with crude oil to a level of 1000 mg/kg. Sewage sludge treatments were applied at the 3 levels of 0, 100, and 200 gr/5kg soil in 3 replicates. The soils were kept in the normal moisture aerobic environment for 5 and 10 weeks. The soils were then analyzed for Hydrocarbon-degrading heterotrophic bacterial count. Oil extraction from the samples was accomplished using the oil Soxhlet extraction method and oil degradation was measured by GC chromatography. The results showed that the hydrocarbon-degrading and heterotrophic bacterial counts in all the treatments increased with time. Results indicate that heterotrophic bacterial population increased from 6×103 cfu/gr soil to  2×1010  cfu/gr soil. Also, C/N ratio decreased from 6 to 3. GC results indicated that all normal Alkanes and Isopernoids, i.e. Phytane and Pristane, decreased by 50-90 percent in all the treatments. It was also found that the application of sewage sludge at 100 gr/5kg soil to oil-contaminated soil leads to greater rates of biodegradation after 5 weeks

Temperature regulation of marine heterotrophic prokaryotes increases latitudinally as a breach between bottom-up and top-down controls

KAUST Repository

Moran, Xose Anxelu G.

2017-04-19

Planktonic heterotrophic prokaryotes make up the largest living biomass and process most organic matter in the ocean. Determining when and where the biomass and activity of heterotrophic prokaryotes are controlled by resource availability (bottom-up), predation and viral lysis (top-down) or temperature will help in future carbon cycling predictions. We conducted an extensive survey across subtropical and tropical waters of the Atlantic, Indian and Pacific Oceans during the Malaspina 2010 Global Circumnavigation Expedition and assessed indices for these three types of controls at 109 stations (mostly from the surface to 4000 m depth). Temperature control was approached by the apparent activation energy in eV (ranging from 0.46 to 3.41), bottom-up control by the slope of the log-log relationship between biomass and production rate (ranging from -0.12 to 1.09) and top-down control by an index that considers the relative abundances of heterotrophic nanoflagellates and viruses (ranging from 0.82 to 4.83). We conclude that temperature becomes dominant (i.e. activation energy >1.5 eV) within a narrow window of intermediate values of bottom-up (0.3-0.6) and top-down 0.8-1.2) controls. A pervasive latitudinal pattern of decreasing temperature regulation towards the Equator, regardless of the oceanic basin, suggests that the impact of global warming on marine microbes and their biogeochemical function will be more intense at higher latitudes. Our analysis predicts that 1°C ocean warming will result in increased biomass of heterotrophic prokaryoplankton only in waters with <26°C of mean annual surface temperature. This article is protected by copyright. All rights reserved.

USDA soil classification system dictates site surface management

International Nuclear Information System (INIS)

Bowmer, W.J.

1985-01-01

Success or failure of site surface management practices greatly affects long-term site stability. The US Department of Agriculture (USDA) soil classification system best documents those parameters which control the success of installed practices for managing both erosion and surface drainage. The USDA system concentrates on soil characteristics in the upper three meters of the surface that support the associated flora both physically and physiologically. The USDA soil survey first identifies soil series based on detailed characteristics that are related to production potential. Using the production potential, land use capability classes are developed. Capability classes reveal the highest and best agronomic use for the site. Lower number classes are considered arable while higher number classes are best suited for grazing agriculture. Application of ecological principles based on the USDA soil survey reveals the current state of the site relative to its ecological potential. To assure success, site management practices must be chosen that are compatible with both production capability and current state of the site

Response of soil microbial and invertebrate communities to tracked vehicle disturbance in tallgrass prairie

Science.gov (United States)

P.S. Althoff; T.C. Todd; S.J. Thien; M.A. Callaham

2009-01-01

Soil biota drive fundamental ecosystem processes such as decomposition, nutrient cycling, and maintenance of soil structure. They are especially active in grassland ecosystems such as the tallgrass by heterotrophic soil organisms. Because both soil microbes and soil fauna display perturbation responses that integrate the physical, chemical, and biological changes to...

Formation and development of salt crusts on soil surfaces

KAUST Repository

Dai, Sheng; Shin, Hosung; Santamarina, Carlos

2015-01-01

The salt concentration gradually increases at the soil free surface when the evaporation rate exceeds the diffusive counter transport. Eventually, salt precipitates and crystals form a porous sodium chloride crust with a porosity of 0.43 ± 0.14. After detaching from soils, the salt crust still experiences water condensation and salt deliquescence at the bottom, brine transport across the crust driven by the humidity gradient, and continued air-side precipitation. This transport mechanism allows salt crust migration away from the soil surface at a rate of 5 μm/h forming salt domes above soil surfaces. The surface characteristics of mineral substrates and the evaporation rate affect the morphology and the crystal size of precipitated salt. In particular, substrate hydrophobicity and low evaporation rate suppress salt spreading.

Formation and development of salt crusts on soil surfaces

KAUST Repository

Dai, Sheng

2015-12-14

The salt concentration gradually increases at the soil free surface when the evaporation rate exceeds the diffusive counter transport. Eventually, salt precipitates and crystals form a porous sodium chloride crust with a porosity of 0.43 ± 0.14. After detaching from soils, the salt crust still experiences water condensation and salt deliquescence at the bottom, brine transport across the crust driven by the humidity gradient, and continued air-side precipitation. This transport mechanism allows salt crust migration away from the soil surface at a rate of 5 μm/h forming salt domes above soil surfaces. The surface characteristics of mineral substrates and the evaporation rate affect the morphology and the crystal size of precipitated salt. In particular, substrate hydrophobicity and low evaporation rate suppress salt spreading.

Effect of soil surface roughness on infiltration water, ponding and runoff on tilled soils under rainfall simulation experiments

NARCIS (Netherlands)

Zhao, Longshan; Hou, Rui; Wu, Faqi; Keesstra, Saskia

2018-01-01

Agriculture has a large effect on the properties of the soil and with that on soil hydrology. The partitioning of rainfall into infiltration and runoff is relevant to understand runoff generation, infiltration and soil erosion. Tillage manages soil surface properties and generates soil surface

Influence of soil surface structure on simulated infiltration and subsequent evaporation

International Nuclear Information System (INIS)

Verplancke, H.; Hartmann, R.; Boodt, M. de

1983-01-01

A laboratory rainfall and evaporation experiment was conducted to study the effectiveness of the soil surface structure on infiltration and subsequent evaporation. The stability of the surface layer was improved through the application of synthetic additives such as bituminous emulsion and a prepolymer of polyurea (Uresol). The soil column where the soil surface was treated with a bituminous emulsion shows a decrease in depth of wetting owing to the water repellency of that additive, and consequently an increased runoff. However, the application of Uresol to the surface layer improved the infiltration. The main reason for these differences is that in the untreated soils there is a greater clogging of macropores originating from aggregate breakdown under raindrop impact in the top layer. The evaporation experiment started after all columns were wetted to a similar soil-water content and was carried out in a controlled environmental tunnel. Soil-water content profiles were established during evaporation by means of a fully automatic γ-ray scanner. It appears that in both treatments the cumulative evaporation was less than in the untreated soil. This was due to the effect of an aggregated and stabilized surface layer. Under a treated soil surface the evaporation remains constant during the whole experiment. However, under an untreated soil surface different evaporation stages were recorded. From these experiments the impression is gained that the effect of aggregating the soil surface is an increase of the saturated hydraulic conductivity under conditions near saturation. On the other hand, a finely structured layer exhibits a greater hydraulic conductivity during evaporation in the lower soil-water potential range than a coarsely aggregated layer. So it may be concluded that, to obtain the maximum benefit from the available water - optimal water conservation - much attention must be given to the aggregation of the top soil and its stability. (author)

BACTERIOLOGICAL PROPERTIES OF MARINE WATER IN ADRIATIC FISH FARMS: ENUMERATION OF HETEROTROPHIC BACTERIA

Directory of Open Access Journals (Sweden)

Emin Teskeredžić

2012-12-01

Full Text Available Aquaculture is currently one of the fastest growing food production sectors in the world. Increase in nutrients and organic wastes lead to general deterioration of water quality. The problem of water quality is associated with both physical and chemical factors, as well as microbiological water quality. Heterotrophic bacteria play an important role in the process of decomposition of organic matter in water environment and indicate eutrophication process. Here we present our experience and knowledge on bacterial properties of marine water in the Adriatic fish farms with European sea bass (Dicentrarchus labrax L., 1758, with an emphasis on enumeration of heterotrophic bacteria in marine water. We applied two temperatures of incubation, as well as two methods for enumeration of heterotrophic bacteria: substrate SimPlate® test and spread plate method on conventional artificial media (Marine agar and Tryptic Soy agar with added NaCl. The results of analysis of bacteriological properties of marine water in the Adriatic fish farms showed that enumeration of heterotrophic bacteria in marine water depends on the applied incubation temperature and media for enumeration. At the same time, the incubation temperature of 22C favours more intense growth of marine heterotrophic bacteria, whereas a SimPlate test gives higher values of heterotrophic bacteria. Volatile values of heterotrophic bacteria during this research indicate a possible deterioration of microbiological water quality in the Adriatic fish farms and a need for regular monitoring of marine water quality.

Species identities, not functional groups, explain the effects of earthworms on litter carbon-derived soil respiration

Science.gov (United States)

Soil respiration is frequently measured as a surrogate for biological activities and is important in soil carbon cycling. The heterotrophic component of soil respiration is primarily driven by microbial decomposition of leaf litter and soil organic matter, and is partially controlled by resource ava...

Fourier and granulometry methods on 3D images of soil surfaces for evaluating soil aggregate size distribution

DEFF Research Database (Denmark)

Jensen, T.; Green, O.; Munkholm, Lars Juhl

2016-01-01

The goal of this research is to present and compare two methods for evaluating soil aggregate size distribution based on high resolution 3D images of the soil surface. The methods for analyzing the images are discrete Fourier transform and granulometry. The results of these methods correlate...... with a measured weight distribution of the soil aggregates. The results have shown that it is possible to distinguish between the cultivated and the uncultivated soil surface. A sensor system suitable for capturing in-situ high resolution 3D images of the soil surface is also described. This sensor system...

Heterotrophic cultivation of microalgae for production of biodiesel.

Science.gov (United States)

Mohamed, Mohd Shamzi; Wei, Lai Zee; Ariff, Arbakariya B

2011-08-01

High cell density cultivation of microalgae via heterotrophic growth mechanism could effectively address the issues of low productivity and operational constraints presently affecting the solar driven biodiesel production. This paper reviews the progress made so far in the development of commercial-scale heterotrophic microalgae cultivation processes. The review also discusses on patentable concepts and innovations disclosed in the past four years with regards to new approaches to microalgal cultivation technique, improvisation on the process flow designs to economically produced biodiesel and genetic manipulation to confer desirable traits leading to much valued high lipid-bearing microalgae strains.

Parameter estimation of a two-horizon soil profile by combining crop canopy and surface soil moisture observations using GLUE

Science.gov (United States)

Sreelash, K.; Sekhar, M.; Ruiz, L.; Tomer, S. K.; Guérif, M.; Buis, S.; Durand, P.; Gascuel-Odoux, C.

2012-08-01

SummaryEstimation of soil parameters by inverse modeling using observations on either surface soil moisture or crop variables has been successfully attempted in many studies, but difficulties to estimate root zone properties arise when heterogeneous layered soils are considered. The objective of this study was to explore the potential of combining observations on surface soil moisture and crop variables - leaf area index (LAI) and above-ground biomass for estimating soil parameters (water holding capacity and soil depth) in a two-layered soil system using inversion of the crop model STICS. This was performed using GLUE method on a synthetic data set on varying soil types and on a data set from a field experiment carried out in two maize plots in South India. The main results were (i) combination of surface soil moisture and above-ground biomass provided consistently good estimates with small uncertainity of soil properties for the two soil layers, for a wide range of soil paramater values, both in the synthetic and the field experiment, (ii) above-ground biomass was found to give relatively better estimates and lower uncertainty than LAI when combined with surface soil moisture, especially for estimation of soil depth, (iii) surface soil moisture data, either alone or combined with crop variables, provided a very good estimate of the water holding capacity of the upper soil layer with very small uncertainty whereas using the surface soil moisture alone gave very poor estimates of the soil properties of the deeper layer, and (iv) using crop variables alone (else above-ground biomass or LAI) provided reasonable estimates of the deeper layer properties depending on the soil type but provided poor estimates of the first layer properties. The robustness of combining observations of the surface soil moisture and the above-ground biomass for estimating two layer soil properties, which was demonstrated using both synthetic and field experiments in this study, needs now to

Mapping Surface Heat Fluxes by Assimilating SMAP Soil Moisture and GOES Land Surface Temperature Data

Science.gov (United States)

Lu, Yang; Steele-Dunne, Susan C.; Farhadi, Leila; van de Giesen, Nick

2017-12-01

Surface heat fluxes play a crucial role in the surface energy and water balance. In situ measurements are costly and difficult, and large-scale flux mapping is hindered by surface heterogeneity. Previous studies have demonstrated that surface heat fluxes can be estimated by assimilating land surface temperature (LST) and soil moisture to determine two key parameters: a neutral bulk heat transfer coefficient (CHN) and an evaporative fraction (EF). Here a methodology is proposed to estimate surface heat fluxes by assimilating Soil Moisture Active Passive (SMAP) soil moisture data and Geostationary Operational Environmental Satellite (GOES) LST data into a dual-source (DS) model using a hybrid particle assimilation strategy. SMAP soil moisture data are assimilated using a particle filter (PF), and GOES LST data are assimilated using an adaptive particle batch smoother (APBS) to account for the large gap in the spatial and temporal resolution. The methodology is implemented in an area in the U.S. Southern Great Plains. Assessment against in situ observations suggests that soil moisture and LST estimates are in better agreement with observations after assimilation. The RMSD for 30 min (daytime) flux estimates is reduced by 6.3% (8.7%) and 31.6% (37%) for H and LE on average. Comparison against a LST-only and a soil moisture-only assimilation case suggests that despite the coarse resolution, assimilating SMAP soil moisture data is not only beneficial but also crucial for successful and robust flux estimation, particularly when the uncertainties in the model estimates are large.

Surface Soil Moisture Memory Estimated from Models and SMAP Observations

Science.gov (United States)

He, Q.; Mccoll, K. A.; Li, C.; Lu, H.; Akbar, R.; Pan, M.; Entekhabi, D.

2017-12-01

Soil moisture memory(SMM), which is loosely defined as the time taken by soil to forget an anomaly, has been proved to be important in land-atmosphere interaction. There are many metrics to calculate the SMM timescale, for example, the timescale based on the time-series autocorrelation, the timescale ignoring the soil moisture time series and the timescale which only considers soil moisture increment. Recently, a new timescale based on `Water Cycle Fraction' (Kaighin et al., 2017), in which the impact of precipitation on soil moisture memory is considered, has been put up but not been fully evaluated in global. In this study, we compared the surface SMM derived from SMAP observations with that from land surface model simulations (i.e., the SMAP Nature Run (NR) provided by the Goddard Earth Observing System, version 5) (Rolf et al., 2014). Three timescale metrics were used to quantify the surface SMM as: T0 based on the soil moisture time series autocorrelation, deT0 based on the detrending soil moisture time series autocorrelation, and tHalf based on the Water Cycle Fraction. The comparisons indicate that: (1) there are big gaps between the T0 derived from SMAP and that from NR (2) the gaps get small for deT0 case, in which the seasonality of surface soil moisture was removed with a moving average filter; (3) the tHalf estimated from SMAP is much closer to that from NR. The results demonstrate that surface SMM can vary dramatically among different metrics, while the memory derived from land surface model differs from the one from SMAP observation. tHalf, with considering the impact of precipitation, may be a good choice to quantify surface SMM and have high potential in studies related to land atmosphere interactions. References McColl. K.A., S.H. Alemohammad, R. Akbar, A.G. Konings, S. Yueh, D. Entekhabi. The Global Distribution and Dynamics of Surface Soil Moisture, Nature Geoscience, 2017 Reichle. R., L. Qing, D.L. Gabrielle, A. Joe. The "SMAP_Nature_v03" Data

Comparative Study of Crude Oil Contamination Effect on Industrial and Forest Soil Microbial Community

Directory of Open Access Journals (Sweden)

Nasrin Ansari

2017-02-01

Full Text Available Introduction: Petroleum hydrocarbons are widespread pollutant that enters to soil by some pathwayssuch as: Transportation of crude oil, conservation of oil compounds, crude oil spill and treatment process on refineries. Oil pollution has some ecological effect on soil that disturbed composition and diversity of microbial community. Also this pollution has some effects on microbial activity and enzymes of soil. Forests ecosystems may be polluted with petroleum hydrocarbons via different ways such as transportation and spill of crude oil from resource of petroleum storage. Industrial soil defined as the soils that located in industrial area such as petrochemical plant, mine, chemical factories and etc. These soils always contaminated to many pollutant such as: oil, diesel and heavy metals. These pollutants have some effects on the texture of the soil and microbial community. The aim of this research is to understand the effect of oil pollution on two different soils. Material and Methods: In order to evaluate the effect of crude oil on soil microbial community, two different soil samples were collected from industrial and forest soils. Six microcosms were designed in this experiment. Indeed each soil sample examined inthree microcosms asunpolluted microcosm, polluted microcosm, and polluted microcosm with nutrient supply of Nitrogen and PhosphorusSome factors were assayed in each microcosm during 120 days of experiment. The included study factors were: total heterotrophic bacteria, total crude oil degrading bacteria, dehydrogenase enzyme and crude oil biodegradation. For enumeration of heterotrophic bacteria nutrient agar medium was used. In this method serial dilutions were done from each soil and spread on nutrient agar medium then different colonies were counted. For enumeration of degrading bacteria Bushnel-Hass (BH medium were used. The composition of this medium was (g/lit: 1 gr KH2PO4, 1gr K2HPO4, 0.2 gr MgSO4.7H2O, 0.02 gr CaCl2, 1 gr NH4

Can heterotrophic uptake of dissolved organic carbon and zooplankton mitigate carbon budget deficits in annually bleached corals?

Science.gov (United States)

Levas, Stephen; Grottoli, Andréa G.; Schoepf, Verena; Aschaffenburg, Matthew; Baumann, Justin; Bauer, James E.; Warner, Mark E.

2016-06-01

Annual coral bleaching events due to increasing sea surface temperatures are predicted to occur globally by the mid-century and as early as 2025 in the Caribbean, and severely impact coral reefs. We hypothesize that heterotrophic carbon (C) in the form of zooplankton and dissolved organic carbon (DOC) is a significant source of C to bleached corals. Thus, the ability to utilize multiple pools of fixed carbon and/or increase the amount of fixed carbon acquired from one or more pools of fixed carbon (defined here as heterotrophic plasticity) could underlie coral acclimatization and persistence under future ocean-warming scenarios. Here, three species of Caribbean coral— Porites divaricata, P. astreoides, and Orbicella faveolata—were experimentally bleached for 2.5 weeks in two successive years and allowed to recover in the field. Zooplankton feeding was assessed after single and repeat bleaching, while DOC fluxes and the contribution of DOC to the total C budget were determined after single bleaching, 11 months on the reef, and repeat bleaching. Zooplankton was a large C source for P. astreoides, but only following single bleaching. DOC was a source of C for single-bleached corals and accounted for 11-36 % of daily metabolic demand (CHARDOC), but represented a net loss of C in repeat-bleached corals. In repeat-bleached corals, DOC loss exacerbated the negative C budgets in all three species. Thus, the capacity for heterotrophic plasticity in corals is compromised under annual bleaching, and heterotrophic uptake of DOC and zooplankton does not mitigate C budget deficits in annually bleached corals. Overall, these findings suggest that some Caribbean corals may be more susceptible to repeat bleaching than to single bleaching due to a lack of heterotrophic plasticity, and coral persistence under increasing bleaching frequency may ultimately depend on other factors such as energy reserves and symbiont shuffling.

Membrane biofouling in a wastewater nitrification reactor: microbial succession from autotrophic colonization to heterotrophic domination

KAUST Repository

Lu, Huijie

2015-10-22

Membrane biofouling is a complex process that involves bacterial adhesion, extracellular polymeric substances (EPS) excretion and utilization, and species interactions. To obtain a better understanding of the microbial ecology of biofouling process, this study conducted rigorous, time-course analyses on the structure, EPS and microbial composition of the fouling layer developed on ultrafiltration membranes in a nitrification bioreactor. During a 14-day fouling event, three phases were determined according to the flux decline and microbial succession patterns. In Phase I (0-2 days), small sludge flocs in the bulk liquid were selectively attached on membrane surfaces, leading to the formation of similar EPS and microbial community composition as the early biofilms. Dominant populations in small flocs, e.g., Nitrosomonas, Nitrobacter, and Acinetobacter spp., were also the major initial colonizers on membranes. In Phase II (2-4 d), fouling layer structure, EPS composition, and bacterial community went through significant changes. Initial colonizers were replaced by fast-growing and metabolically versatile heterotrophs (e.g., unclassified Sphingobacteria). The declining EPS polysaccharide to protein (PS:PN) ratios could be correlated well with the increase in microbial community diversity. In Phase III (5-14 d), heterotrophs comprised over 90% of the community, whereas biofilm structure and EPS composition remained relatively stable. In all phases, AOB and NOB were constantly found within the top 40% of the fouling layer, with the maximum concentrations around 15% from the top. The overall microbial succession pattern from autotrophic colonization to heterotrophic domination implied that MBR biofouling could be alleviated by forming larger bacterial flocs in bioreactor suspension (reducing autotrophic colonization), and by designing more specific cleaning procedures targeting dominant heterotrophs during typical filtration cycles.

Soil [N] modulates soil C cycling in CO2-fumigated tree stands

DEFF Research Database (Denmark)

Dieleman, W. I. J.; Luyssaert, S.; Rey, A.

2010-01-01

Under elevated atmospheric CO2 concentrations, soil carbon (C) inputs are typically enhanced, suggesting larger soil C sequestration potential. However, soil C losses also increase and progressive nitrogen (N) limitation to plant growth may reduce the CO2 effect on soil C inputs with time. We...... compiled a data set from 131 manipulation experiments, and used meta-analysis to test the hypotheses that: (1) elevated atmospheric CO2 stimulates soil C inputs more than C losses, resulting in increasing soil C stocks; and (2) that these responses are modulated by N. Our results confirm that elevated CO2...... induces a C allocation shift towards below-ground biomass compartments. However, the increased soil C inputs were offset by increased heterotrophic respiration (Rh), such that soil C content was not affected by elevated CO2. Soil N concentration strongly interacted with CO2 fumigation: the effect...

The Heterotrophic Bacterial Response During the Meso-scale Southern Ocean Iron Experiment (SOFeX)

Science.gov (United States)

Oliver, J. L.; Barber, R. T.; Ducklow, H. W.

2002-12-01

Previous meso-scale iron enrichments have demonstrated the stimulatory effect of iron on primary productivity and the accelerated flow of carbon into the surface ocean foodweb. In stratified waters, heterotrophic activity can work against carbon export by remineralizing POC and/or DOC back to CO2, effectively slowing the biological pump. To assess the response of heterotrophic activity to iron enrichment, we measured heterotrophic bacterial production and abundance during the Southern Ocean Iron Experiment (SOFeX). Heterotrophic bacterial processes primarily affect the latter of the two carbon export mechanisms, removal of DOC to the deep ocean. Heterotrophic bacterial production (BP), measured via tritiated thymidine (3H-TdR) and leucine (3H-Leu) incorporation, increased ~40% over the 18-d observation period in iron fertilized waters south of the Polar Front (South Patch). Also, South Patch BP was 61% higher than in the surrounding unfertilized waters. Abundance, measured by flow cytometry (FCM) and acridine orange direct counts (AODC), also increased in the South Patch from 3 to 5 x 108 cells liter-1, a 70% increase. Bacterial biomass increased from ~3.6 to 6.3 μg C liter-1, a clear indication that production rates exceeded removal rates (bactivory, viral lysis) over the course of 18 days. Biomass within the fertilized patch was 11% higher than in surrounding unfertilized waters reflecting a similar trend. This pattern is in contrast to SOIREE where no accumulation of biomass was observed. High DNA-containing (HDNA) cells detected by FCM also increased over time in iron fertilized waters from 20% to 46% relative to the total population suggesting an active subpopulation of cells that were growing faster than the removal rates. In iron fertilized waters north of the Polar Front (North Patch), BP and abundance were ~90% and 80% higher, respectively, than in unfertilized waters. Our results suggest an active bacterial population that responded to iron fertilization

Nitrogen fixation by free-living microorganisms in tropical rice soils using labelled fertilizer. Part of a coordinated programme on isotope techniques in studies of biological nitrogen fixation for the dual purpose of increasing crop production and decreasing nitrogen fertilizer use to conserve the environment

International Nuclear Information System (INIS)

Rao, V.R.

1981-11-01

Both acetylene-reduction and 15 N techniques were used to study heterotrophic N fixation in the rhizosphere of rice plants. Soils subjected to flooding in 4 soil types in both greenhouse and the field were found to stimulate greater heterotrophic nitrogen fixation than moist soils. The addition of organic materials, in particular, cellulose and rice straw, in general, enhanced nitrogen fixed by heterotrophic organisms living in the rhizosphere of rice plants. The highest amount of N fixed was 38 kg N/ha, and was obtained in a flooded lateritic soil to which had been added cellulose. Heterotrophic nitrogen fixation was influenced by soil type. In this study, the lowest value for fixed N was recorded in an acid sulphate soil of low pH. The addition of increasing amounts of inorganic nitrogen fertilizer in the form of ammonium sulphate suppressed rhizospheric nitrogen fixation in all soils, but the extent of suppression differed in the different soils. Benomyl fungicide and methyl carbamate insecticide had a stimulatory effect on heterotrophic nitrogen fixation in soils under rice roots. Different rice cultivars stimulated strains of Azospirillum to varying extent, and thus did not fix nitrogen to the same extent. It is thus possible that varieties of rice could be selected on the basis of their ability to support non-symbiotic N fixation in their rhizosphere

Effects Of Palm Oil Mill Effluents (Pome) On Soil Bacterial Flora And ...

African Journals Online (AJOL)

Sandy loam soil in Egbema, Rivers State was impacted with POME at different levels and analyzed for bacteriological quality and soil enzyme activities. Light application caused significant increase in total heterotrophic, phosphate solibilizing, nitrifying and lipolytic bacterial counts while heavy application caused a decrease ...

Copper in Surface Soil of Veles Region, Macedonia

International Nuclear Information System (INIS)

Panchevski, Zlatko; Stafilov, Trajche; Frontasyeva, Marina V.

2006-01-01

For the first time a systematic study of copper distribution in surface soil over of the Veles region, known for its lead and zinc industrial activity, was undertaken. A total of 201 soil samples were collected according to a dense net (0.5 km) in urban and less dense net (1 km) in rural areas. Copper was determined by flame atomic absorption spectrometry (FAAS) using microwave digestion technique with two different types of solvents: aqua regia (HCI and HNO 3 )and the mixture of strong acids (HNO 3 , HCI, and HF). So far the same soil samples were subjected to reactor non-destructive multi-element instrumental neutron activation analysis (INAA), it served as a reference analytical technique for bulk copper determination. The results obtained by two methods of FAAS and INAA are discussed. GIS technology was applied to reveal the areas most affected by copper contamination. It was found that the content of copper in soil samples around the lead and zinc smelter plant is the highest and reaches 1800 mg/kg. Copper content in surface soil all around the town of Veles exceeds maximum permissible level for urban surface soil. Elevated copper content in some rural areas of the Veles region most likely could be explained through using copper containing fungicides for agricultural needs. (Author)

Heterotrophic bacterial populations in tropical sandy beaches

Digital Repository Service at National Institute of Oceanography (India)

Nair, S.; LokaBharathi, P.A.

Distribution pattern of heterotrophic bacterial flora of three sandy beaches of the west coast of India was studied. The population in these beaches was microbiologically different. Population peaks of halotolerant and limnotolerant forms were...

Detection of irradiation induced changes on the activity and diversity of soil organisms: the effect of soil type

International Nuclear Information System (INIS)

Parekh, N.R.; Beresford, N.A.; Black, H.I.J.; Potter, E.D.; Poskitt, J.M.; Dodd, B.A.

2004-01-01

Whilst non-radiological environmental impact assessments consider impacts on ecosystem function by assessing soil health the techniques of doing so have rarely been applied to radiological studies. Our aim in the study described was to measure the effects of irradiation treatments on soil communities from three different soils. Undisturbed soil cores from two temperate woodland sites (deciduous and coniferous) and a grassland site were irradiated to give a range of cumulative doses from 0 160 Gy. All cores were incubated at 15 deg C and three cores from each treatment sampled after <1, 3 and 8 days post irradiation. Soil samples were analysed for the presence and abundance of fauna, fungi and heterotrophic bacteria. The activity and functional diversity of soil microbial communities was also assessed in terms of their potential to utilise a range of carbon sources. There was a small impact on Oribatid mites at the highest dose but no significant effect on other soil faunal groups. Although significant changes in the numbers of cultivable fungi or fast growing heterotrophic bacteria were not observed at any of the treatment doses, the numbers of cultivable Pseudomonas spp. declined in all three soil types after irradiation at 80 and 160 Gy. This decline was greatest in the coniferous forest soil. Microbial communities from this soil also showed a dramatic decrease in metabolic activity and in the number of substrates utilised after irradiation at 160 Gy as compared with control non-irradiated samples. Our results show that the affects of gamma irradiation on soil microorganisms are more pronounced in the two organic forest soils as compared to the mineral grassland soil. These differences can be related to two factors; variations in the physico-chemical shielding properties of the soils and differences in the indigenous communities in terms of radioresistant species. (author)

Comparative study of biodegradation of crude oil in soil amended ...

African Journals Online (AJOL)

Analysis of soil samples treated with 10% (v/w) Escravos light crude oil and amended with chicken droppings and NPK fertilizer revealed that the aerobic heterotrophic bacterial counts were depressed while the proliferation of crude oil degrading bacteria (CDB) in the soil was encouraged. The counts of CDB in oil free ...

Soil fauna communities and microbial respiration in high Arctic tundra soils at Zackenberg, Northeast Greenland

DEFF Research Database (Denmark)

Sørensen, Louise I.; Holmstrup, Martin; Maraldo, Kristine

2006-01-01

The soil fauna communities were described for three dominant vegetation types in a high arctic site at Zackenberg, Northeast Greenland. Soil samples were extracted to quantify the densities of mites, collembolans, enchytraeids, diptera larvae, nematodes and protozoa. Rates of microbial respiration...... densities (naked amoeba and heterotrophic flagellates) were equal. Respiration rate of unamended soil was similar in soil from the three plots. However, a higher respiration rate increase in carbon + nutrient amended soil and the higher densities of soil fauna (with the exception of mites and protozoa...... were also assessed. Collembolans were found in highest densities in dry heath soil, about 130,000 individuals m-2, more than twice as high as in mesic heath soils. Enchytraeids, diptera larvae and nematodes were also more abundant in the dry heath soil than in mesic heath soils, whereas protozoan...

Investigation of mixotrophic, heterotrophic, and autotrophic growth of Chlorella vulgaris under agricultural waste medium.

Science.gov (United States)

Mohammad Mirzaie, M A; Kalbasi, M; Mousavi, S M; Ghobadian, B

2016-01-01

Growth of Chlorella vulgaris and its lipid production were investigated under autotrophic, heterotrophic, and mixotrophic conditions. Cheap agricultural waste molasses and corn steep liquor from industries were used as carbon and nitrogen sources, respectively. Chlorella vulgaris grew remarkably under this agricultural waste medium, which resulted in a reduction in the final cost of the biodiesel production. Maximum dry weight of 2.62 g L(-1) was obtained in mixotrophic growth with the highest lipid concentration of 0.86 g L(-1). These biomass and lipid concentrations were, respectively, 140% and 170% higher than autotrophic growth and 300% and 1200% higher than heterotrophic growth. In mixotrophic growth, independent or simultaneous occurrence of autotrophic and heterotrophic metabolisms was investigated. The growth of the microalgae was observed to take place first heterotrophically to a minimum substrate concentration with a little fraction in growth under autotrophic metabolism, and then the cells grew more autotrophically. It was found that mixotrophic growth was not a simple combination of heterotrophic and autotrophic growth.

Surface soil contamination standards

International Nuclear Information System (INIS)

Boothe, G.F.

1979-01-01

The purpose of this document is to define surface soil contamination limits for radioactive materials below which posting, restrictions and environmental controls are not necessary in order to protect personnel and the environment. The standards can also be used to determine if solid waste or other material is contaminated relative to disposal requirements. The derivation of the standards is given

Membrane biofouling in a wastewater nitrification reactor: Microbial succession from autotrophic colonization to heterotrophic domination.

Science.gov (United States)

Lu, Huijie; Xue, Zheng; Saikaly, Pascal; Nunes, Suzana P; Bluver, Ted R; Liu, Wen-Tso

2016-01-01

Membrane biofouling is a complex process that involves bacterial adhesion, extracellular polymeric substances (EPS) excretion and utilization, and species interactions. To obtain a better understanding of the microbial ecology of biofouling process, this study conducted rigorous, time-course analyses on the structure, EPS and microbial composition of the fouling layer developed on ultrafiltration membranes in a nitrification bioreactor. During a 14-day fouling event, three phases were determined according to the flux decline and microbial succession patterns. In Phase I (0-2 days), small sludge flocs in the bulk liquid were selectively attached on membrane surfaces, leading to the formation of similar EPS and microbial community composition as the early biofilms. Dominant populations in small flocs, e.g., Nitrosomonas, Nitrobacter, and Acinetobacter spp., were also the major initial colonizers on membranes. In Phase II (2-4 d), fouling layer structure, EPS composition, and bacterial community went through significant changes. Initial colonizers were replaced by fast-growing and metabolically versatile heterotrophs (e.g., unclassified Sphingobacteria). The declining EPS polysaccharide to protein (PS:PN) ratios could be correlated well with the increase in microbial community diversity. In Phase III (5-14 d), heterotrophs comprised over 90% of the community, whereas biofilm structure and EPS composition remained relatively stable. In all phases, AOB and NOB were constantly found within the top 40% of the fouling layer, with the maximum concentrations around 15% from the top. The overall microbial succession pattern from autotrophic colonization to heterotrophic domination implied that MBR biofouling could be alleviated by forming larger bacterial flocs in bioreactor suspension (reducing autotrophic colonization), and by designing more specific cleaning procedures targeting dominant heterotrophs during typical filtration cycles. Copyright © 2015 Elsevier Ltd. All

Factors limiting heterotrophic bacterial production in the southern Pacific Ocean

Directory of Open Access Journals (Sweden)

F. Van Wambeke

2008-05-01

Full Text Available The role of potential factors limiting bacterial growth was investigated along vertical and longitudinal gradients across the South Eastern Pacific Gyre. The effects of glucose, nitrate, ammonium and phosphate additions on heterotrophic bacterial production (using leucine technique were studied in parallel in unfiltered seawater samples incubated under natural daily irradiance. The enrichments realized on the subsurface showed three types of responses. From 141° W (Marquesas plateau to approx 125° W, bacteria were not bottom-up controlled, as confirmed by the huge potential of growth in non-enriched seawater (median of enhancement factor×39 in 24 h. Within the Gyre (125° W–95° W, nitrogen alone stimulated leucine incorporation rates (median×4.2, but rapidly labile carbon (glucose became a second limiting factor (median×37 when the two elements were added. Finally from the border of the gyre to the Chilean upwelling (95° W–73° W, labile carbon was the only factor stimulating heterotrophic bacterial production. Interaction between phytoplankton and heterotrophic bacterial communities and the direct versus indirect effect of iron and macronutrients on bacterial production were also investigated in four selected sites: two sites on the vicinity of the Marquesas plateau, the centre of the gyre and the Eastern border of the gyre. Both phytoplankton and heterotrophic bacteria were limited by availability of nitrogen within the gyre, but not by iron. Iron limited phytoplankton at Marquesas plateau and at the eastern border of the gyre. However 48 h enrichment experiments were not sufficient to show any clear limitation of heterotrophic bacteria within Marquesas plateau and showed a limitation of these organisms by labile carbon in the eastern border of the Gyre.

Soil surface CO2 flux in a boreal black spruce fire chronosequence

Science.gov (United States)

Wang, Chuankuan; Bond-Lamberty, Ben; Gower, Stith T.

2003-02-01

Understanding the effects of wildfire on the carbon (C) cycle of boreal forests is essential to quantifying the role of boreal forests in the global carbon cycle. Soil surface CO2 flux (Rs), the second largest C flux in boreal forests, is directly and indirectly affected by fire and is hypothesized to change during forest succession following fire. The overall objective of this study was to measure and model Rs for a black spruce (Picea mariana [Mill.] BSP) postfire chronosequence in northern Manitoba, Canada. The experiment design was a nested factorial that included two soil drainage classes (well and poorly drained) × seven postfire aged stands. Specific objectives were (1) to quantify the relationship between Rs and soil temperature for different aged boreal black spruce forests in well-drained and poorly drained soil conditions, (2) to examine Rs dynamics along postfire successional stands, and (3) to estimate annual soil surface CO2 flux for these ecosystems. Soil surface CO2 flux was significantly affected by soil drainage class (p = 0.014) and stand age (p = 0.006). Soil surface CO2 flux was positively correlated to soil temperature (R2 = 0.78, p aged stand combination. Soil surface CO2 flux was significantly greater at the well-drained than the poorly drained stands (p = 0.007) during growing season. Annual soil surface CO2 flux for the 1998, 1995, 1989, 1981, 1964, 1930, and 1870 burned stands averaged 226, 412, 357, 413, 350, 274, and 244 g C m-2 yr-1 in the well-drained stands and 146, 380, 300, 303, 256, 233, and 264 g C m-2 yr-1 in the poorly drained stands. Soil surface CO2 flux during the winter (from 1 November to 30 April) comprised from 5 to 19% of the total annual Rs. We speculate that the smaller soil surface CO2 flux in the recently burned than the older stands is mainly caused by decreased root respiration.

Enrichments of methanotrophic-heterotrophic cultures with high poly-β-hydroxybutyrate (PHB) accumulation capacities.

Science.gov (United States)

Zhang, Tingting; Wang, Xiaowei; Zhou, Jiti; Zhang, Yu

2018-03-01

Methanotrophic-heterotrophic communities were selectively enriched from sewage sludge to obtain a mixed culture with high levels of poly-β-hydroxybutyrate (PHB) accumulation capacity from methane. Methane was used as the carbon source, N 2 as sole nitrogen source, and oxygen and Cu content were varied. Copper proved essential for PHB synthesis. All cultures enriched with Cu could accumulate high content of PHB (43.2%-45.9%), while only small amounts of PHB were accumulated by cultures enriched without Cu (11.9%-17.5%). Batch assays revealed that communities grown with Cu and a higher O 2 content synthesized more PHB, which had a wider optimal CH 4 :O 2 range and produced a high PHB content (48.7%) even though in the presence of N 2 . In all methanotrophic-heterotrophic communities, both methanotrophic and heterotrophic populations showed the ability to accumulate PHB. Although methane was added as the sole carbon source, heterotrophs dominated with abundances between 77.2% and 85.6%. All methanotrophs detected belonged to type II genera, which formed stable communities with heterotrophs of different PHB production capacities. Copyright © 2017. Published by Elsevier B.V.

Modeling how soluble microbial products (SMP) support heterotrophic bacteria in autotroph-based biofilms

DEFF Research Database (Denmark)

Merkey, Brian; Rittmann, Bruce E.; Chopp, David L.

2009-01-01

. In this paper, we develop and use a mathematical model to describe a model biofilm system that includes autotrophic and heterotrophic bacteria and the key products produced by the bacteria. The model combines the methods of earlier multi-species models with a multi-component biofilm model in order to explore...... the interaction between species via exchange of soluble microbial products (SMP). We show that multiple parameter sets are able to describe the findings of experimental studies, and that heterotrophs growing on autotrophically produced SMP may pursue either r- or K-strategies to sustain themselves when SMP...... is their only substrate. We also show that heterotrophs can colonize some distance from the autotrophs and still be sustained by autotrophically produced SMP. This work defines the feasible range of parameters for utilization of SMP by heterotrophs and the nature of the interactions between autotrophs...

The soil-water characteristic curve at low soil-water contents: Relationships with soil specific surface area and texture

DEFF Research Database (Denmark)

Resurreccion, A C; Møldrup, Per; Tuller, M

2011-01-01

dominate over capillary forces, have also been used to estimate soil specific surface area (SA). In the present study, the dry end of the SWRC was measured with a chilled-mirror dew point psychrometer for 41 Danish soils covering a wide range of clay (CL) and organic carbon (OC) contents. The 41 soils were...

Relations between soil surface roughness, tortuosity, tillage treatments, rainfall intensity and soil and water losses from a red yellow latosol

Directory of Open Access Journals (Sweden)

Julieta Bramorski

2012-08-01

Full Text Available The soil surface roughness increases water retention and infiltration, reduces the runoff volume and speed and influences soil losses by water erosion. Similarly to other parameters, soil roughness is affected by the tillage system and rainfall volume. Based on these assumptions, the main purpose of this study was to evaluate the effect of tillage treatments on soil surface roughness (RR and tortuosity (T and to investigate the relationship with soil and water losses in a series of simulated rainfall events. The field study was carried out at the experimental station of EMBRAPA Southeastern Cattle Research Center in São Carlos (Fazenda Canchim, in São Paulo State, Brazil. Experimental plots of 33 m² were treated with two tillage practices in three replications, consisting of: untilled (no-tillage soil (NTS and conventionally tilled (plowing plus double disking soil (CTS. Three successive simulated rain tests were applied in 24 h intervals. The three tests consisted of a first rain of 30 mm/h, a second of 30 mm/h and a third rain of 70 mm/h. Immediately after tilling and each rain simulation test, the surface roughness was measured, using a laser profile meter. The tillage treatments induced significant changes in soil surface roughness and tortuosity, demonstrating the importance of the tillage system for the physical surface conditions, favoring water retention and infiltration in the soil. The increase in surface roughness by the tillage treatments was considerably greater than its reduction by rain action. The surface roughness and tortuosity had more influence on the soil volume lost by surface runoff than in the conventional treatment. Possibly, other variables influenced soil and water losses from the no-tillage treatments, e.g., soil type, declivity, slope length, among others not analyzed in this study.

Incorporating microbial dormancy dynamics into soil decomposition models to improve quantification of soil carbon dynamics of northern temperate forests

Science.gov (United States)

He, Yujie; Yang, Jinyan; Zhuang, Qianlai; Harden, Jennifer W.; McGuire, A. David; Liu, Yaling; Wang, Gangsheng; Gu, Lianhong

2015-01-01

Soil carbon dynamics of terrestrial ecosystems play a significant role in the global carbon cycle. Microbial-based decomposition models have seen much growth recently for quantifying this role, yet dormancy as a common strategy used by microorganisms has not usually been represented and tested in these models against field observations. Here we developed an explicit microbial-enzyme decomposition model and examined model performance with and without representation of microbial dormancy at six temperate forest sites of different forest types. We then extrapolated the model to global temperate forest ecosystems to investigate biogeochemical controls on soil heterotrophic respiration and microbial dormancy dynamics at different temporal-spatial scales. The dormancy model consistently produced better match with field-observed heterotrophic soil CO2 efflux (RH) than the no dormancy model. Our regional modeling results further indicated that models with dormancy were able to produce more realistic magnitude of microbial biomass (analysis showed that soil organic carbon content was the dominating factor (correlation coefficient = 0.4–0.6) in the simulated spatial pattern of soil RHwith both models. In contrast to strong temporal and local controls of soil temperature and moisture on microbial dormancy, our modeling results showed that soil carbon-to-nitrogen ratio (C:N) was a major regulating factor at regional scales (correlation coefficient = −0.43 to −0.58), indicating scale-dependent biogeochemical controls on microbial dynamics. Our findings suggest that incorporating microbial dormancy could improve the realism of microbial-based decomposition models and enhance the integration of soil experiments and mechanistically based modeling.

Heterotrophic respiration in drained tropical peat temperatures influenced by shading gradient

Science.gov (United States)

Jauhiainen, Jyrki; Kerojoki, Otto; Silvennoinen, Hanna; Limin, Suwido; Vasander, Harri

2015-04-01

Lowland peatlands in Southeast Asia constitute a highly concentrated carbon (C) pool of global significance. These peatlands have formed over periods of several millennia by forest vegetation tolerant to flooding and poor substrates. Uncontrollable drainage and reoccurring wild fires in lack of management after removal of forest cover has impaired the C-storing functions in large reclaimed areas. Intergovernmental Panel on Climate Change (IPCC) reporting sees drained tropical organic soils as one of the largest greenhouse gas emissions releasing terrestrial systems. Vast areas of deforested tropical peatlands do not receive noteworthy shading by vegetation, which increases the amount of solar radiation reaching the peat surface. We studied heterotrophic carbon dioxide (CO2), nitrous oxide (N2O) and methane (CH4) fluxes in tropical peat in conditions, where; (i) peat temperatures were modified by artificial shading (no shade, 28%, 51% and 90% from the full sun exposure), (ii) root respiration was minimized, (iii) nutrient availability for peat decomposer community was changed (NPK fertilization of 0 and 313 kg ha-1). The experiment was repeated at two over 20 years ago drained fallow agricultural- and degraded sites in Central Kalimantan, Indonesia. Enhanced shading created a lasting decrease in peat temperatures, and decreased diurnal temperature fluctuations, in comparison to less shaded plots. The largest peat temperature difference was between the unshaded and 90% shaded peat surface, where the average temperatures within the topmost 50-cm peat profile differed 3 °C, and diurnal temperatures at 5 cm depth varied up to 4.2 °C in the unshaded and 0.4 °C in the 90% shaded conditions. Highest impacts on the heterotrophic CO2 fluxes caused by the treatments were on agricultural land, where 90% shading from the full exposure resulted in a 33% lower CO2 emission average on the unfertilised plots and a 66% lower emission average on the fertilised plots. Correlation

Biopiles and biofilters combined for soil cleanup

International Nuclear Information System (INIS)

Lei, J.; Sansregret, J.L.; Cyr, B.

1994-01-01

Bioremediation of hydrocarbon-contaminated soils can be completed using a combination of biopile and biofiltration technologies. Target contaminants, such as gasoline, jet fuel, diesel fuel and other petroleum-derived products are removed from the soil by biodegradation and volatilization in the biopile. Air emissions from the biopile containing volatile hydrocarbons are treated subsequently in a biofilter, where the pollutants are degraded and mineralized by heterotrophic aerobic microorganisms. In the biopile process, contaminated soil is excavated and stockpiled in a treatment area. Remediation of the soil relies on microbial degradation and volatilization of hydrocarbons under controlled treatment conditions

Soil and gas and radon entry potentials for substructure surfaces

International Nuclear Information System (INIS)

Harrison, J.; Sextro, R.G.

1990-01-01

This paper reports on measurement techniques and parameters that describe the potential for areas of a building substructure to have high soil gas and radon entry rates which have been developed. Flows and pressures measured at test holes in substructure surfaces while the substructure was intentionally depressurized were used in a highly simplified electrical circuit to model the substructure/soil network. Data from four New Jersey houses indicate that the soil was a factor of two to six times more resistant to soil gas flow than substructure surfaces, concrete slab floors, including perimeter gaps, cracks, and other penetrations, were approximately five times more resistant to soil gas movement than hollow block walls, and radon entry potentials were highest for slab floors. These indices of entry potential may be useful for characterizing the relative leakiness of below-grade substructure surfaces and for determining the selection and placement of radon control systems

Combined Effects of Nutrient and Pesticide Management on Soil Microbial Activity in Hybrid Rice Double Annual Cropping System

Institute of Scientific and Technical Information of China (English)

XIEXiao-mei; LIAOMin; LIUWei-ping; SusanneKLOSE

2004-01-01

Combined effects on soil microbial activity of nutrient and pesticide management in hybrid rice double annual cropping system were studied. Results of field experiment demonstrated significant changes in soil microbial biomass phospholipid contents,abundance of heterotrophic bacteria and proteolytic bacteria, electron transport system (ETS)/dehydrogenase activity, soil protein contents under different management practices and at various growth stages. Marked depletions in the soil microbial biomass phospholipid contents were found with the advancement of crop growth stages, while the incorporation of fertilizers and/or pesticides also induced slight changes, and the lowest microbial biomass phospholipid content was found with pesticides application alone. A decline in the bacterial abundance of heterotrophic bacteria and proteolytic bacteria was observed during the continuance of crop growth, while the lowest abundance of heterotrophic bacteria and proteolyrJc bacteria was found with pesticides application alone, which coincided with the decline of soil microbial biomass. A consistent increase in the electron transport svstem activit), was measured during the different crop growth stages of rice. The use of fertilizers (NPK) alone or combined with pesticides increased it, while a decline was noticed with pesticides application alone as compared with the control.The soil protein content was found to be relatively stable with fertilizers and/or pesticides application at various growth stages in both crops undertaken, but notable changes were detected at different growrh stages

Combined Effects of Nutrient and Pesticide Management on Soil Microbial Activity in Hybrid Rice Double Annual Cropping System

Institute of Scientific and Technical Information of China (English)

XIE Xiao-mei; LIAO Min; LIU Wei-ping; Susanne KLOSE

2004-01-01

Combined effects on soil microbial activity of nutrient and pesticide management in hybrid rice double annual cropping system were studied. Results of field experiment demonstrated significant changes in soil microbial biomass phospholipid contents,abundance of heterotrophic bacteria and proteolytic bacteria, electron transport system (ETS)/dehydrogenase activity, soil protein contents under different management practices and at various growth stages. Marked depletions in the soil microbial biomass phospholipid contents were found with the advancement of crop growth stages, while the incorporation of fertilizers and/or pesticides also induced slight changes, and the lowest microbial biomass phospholipid content was found with pesticides application alone. A decline in the bacterial abundance of heterotrophic bacteria and proteolytic bacteria was observed during the continuance of crop growth, while the lowest abundance of heterotrophic bacteria and proteolytic bacteria was found with pesticides application alone, which coincided with the decline of soil microbial biomass. A consistent increase in the electron transport system activity was measured during the different crop growth stages of rice. The use of fertilizers (NPK) alone or combined with pesticides increased it, while a decline was noticed with pesticides application alone as compared with the control.The soil protein content was found to be relatively stable with fertilizers and/or pesticides application at various growth stages in both crops undertaken, but notable changes were detected at different growth stages.

Effect of soil surface management on radiocesium concentrations in apple orchard and fruit

International Nuclear Information System (INIS)

Kusaba, Shinnosuke; Matsuoka, Kaori; Abe, Kazuhiro

2016-01-01

We investigated the effect of soil surface management on radiocesium accumulation in an apple orchard in Fukushima Prefecture over 4 years after Tokyo Electric Power Company’s Fukushima Daiichi nuclear power plant accident in mid-March 2011. Different types of soil surface management such as clean cultivation, intertillage management, intertillage with bark compost application, sod culture, and zeolite application were employed. The radiocesium concentrations in soil were higher in the surface layer (0–5 cm) than in the other layers. The radiocesium concentration in the surface layer soil with sod culture in 2014 increased non-significantly compared with that observed in 2011. The radiocesium concentration in the mid-layer soil (5–15 cm) managed with intertillage was higher than that in soil managed using other types of management. The radiocesium amount in the organic matter on the soil surface was the highest in sod culture, and was significantly lower in the management with intertillage. The radiocesium concentration in fruit decreased exponentially during the 4 years in each types of soil surface management. The decrease in radiocesium concentration showed similar trends with each type of soil surface management, even if the concentration in each soil layer varied according to the management applied. Furthermore, intertillage with bark compost application did not affect the radiocesium concentration in fruit. These results suggest that the soil surface management type that affected the radiocesium distribution in the soil or the compost application with conventional practice did not affect its concentration in fruit of apple trees for at least 4 years since the nuclear power plant accident, at a radiocesium deposition level similar to that recorded in Fukushima City. (author)

An experimental study on mass loading of soil particles on plant surfaces

International Nuclear Information System (INIS)

Li, J. G.; Gerzabek, M. H.; Mueck, K.

1994-01-01

Radionuclide contaminated soil adhered to plant surfaces can contribute to human ingestion dose. To determine this contribution, a method of 46 Sc neutron activation analysis was established and tested, by which a detection limit of 0.05 mg soil per g dry plant biomass can be obtained. In the field and greenhouse experiment the mass loading of soil on ryegrass (Lolium perenne L.) and broadbean (Vicia faba L.) was investigated and the contribution from rainsplash and wind erosion were evaluated separately. Soil retained on plant surfaces in field conditions in Seibersdorf/Austria was 5.77 ± 1.44 mg soil per g dry plant for ryegrass and 9.51 ± 0.73 mg soil per g dry plant for broadbean. Estimates of contribution from rainsplash and wind erosion to soil contamination of plants during the experimental period are 68 % and 32 % for broadbean 47 % and 53 % for ryegrass respectively. Mass loading results from field studies indicate that soil adhesion on plant surfaces can contribute up to 23 % of plant 137 Cs contamination, the transfer factors modified by mass loading decline differently, depending on 137 Cs concentration of the soil and the soil mass adhered to plant surfaces. (author)

Dynamics of pollution-indicator and heterotrophic bacteria in sewage treatment lagoons.

OpenAIRE

Legendre, P; Baleux, B; Troussellier, M

1984-01-01

The spatio-temporal dynamics of pollution-indicator bacteria and aerobic heterotrophic bacteria were studied in the sewage treatment lagoons of an urban wastewater center after 26 months of biweekly sampling at eight stations in these lagoons. Robust statistical methods of time-series analysis were used to study successional steps (through chronological clustering) and rhythmic behavior through time (through contingency periodogram). The aerobic heterotrophic bacterial community showed two ty...

Soil heat flux and day time surface energy balance closure

Indian Academy of Sciences (India)

Soil heat flux; surface energy balance; Bowen's ratio; sensible and latent ... The energy storage term for the soil layer 0–0.05 m is calculated and the ground heat ... When a new method that accounts for both soil thermal conduction and soil ...

Long-range alpha detection applied to soil surface monitoring

International Nuclear Information System (INIS)

Caress, R.W.; Allander, K.S.; Bounds, J.A.; Catlett, M.M.; MacArthur, D.W.; Rutherford, D.A.

1992-01-01

The long-range alpha detection (LRAD) technique depends on the detection of ion pairs generated by alpha particles losing energy in air rather than on detection of the alpha particles themselves. Typical alpha particles generated by uranium will travel less than 3 cm in air. In contrast, the ions have been successfully detected many inches or feet away from the contamination. Since LRAD detection systems are sensitive to all ions simultaneously, large LRAD soil surface monitors (SSMS) can be used to collect all of the ions from a large sample. The LRAD SSMs are designed around the fan-less LRAD detector. In this case a five-sided box with an open bottom is placed on the soil surface. Ions generated by alpha decays on the soil surface are collected on a charged copper plate within the box. These ions create a small current from the plate to ground which is monitored with a sensitive electrometer. The current measured is proportional to the number of ions in the box, which is, in turn, proportional to the amount of alpha contamination on the surface of the soil. This report includes the design and construction of a 1-m by 1-m SSM as well as the results of a study at Fernald, OH, as part of the Uranium in Soils Integrated Demonstration

Quantification of chemical transport processes from the soil to surface runoff.

Science.gov (United States)

Tian, Kun; Huang, Chi-Hua; Wang, Guang-Qian; Fu, Xu-Dong; Parker, Gary

2013-01-01

There is a good conceptual understanding of the processes that govern chemical transport from the soil to surface runoff, but few studies have actually quantified these processes separately. Thus, we designed a laboratory flow cell and experimental procedures to quantify the chemical transport from soil to runoff water in the following individual processes: (i) convection with a vertical hydraulic gradient, (ii) convection via surface flow or the Bernoulli effect, (iii) diffusion, and (iv) soil loss. We applied different vertical hydraulic gradients by setting the flow cell to generate different seepage or drainage conditions. Our data confirmed the general form of the convection-diffusion equation. However, we now have additional quantitative data that describe the contribution of each individual chemical loading process in different surface runoff and soil hydrological conditions. The results of this study will be useful for enhancing our understanding of different geochemical processes in the surface soil mixing zone. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

How internal drainage affects evaporation dynamics from soil surfaces ?

Science.gov (United States)

Or, D.; Lehmann, P.; Sommer, M.

2017-12-01

Following rainfall, infiltrated water may be redistributed internally to larger depths or lost to the atmosphere by evaporation (and by plant uptake from depths at longer time scales). A large fraction of evaporative losses from terrestrial surfaces occurs during stage1 evaporation during which phase change occurs at the wet surface supplied by capillary flow from the soil. Recent studies have shown existence of a soil-dependent characteristic length below which capillary continuity is disrupted and a drastic shift to slower stage 2 evaporation ensues. Internal drainage hastens this transition and affect evaporative losses. To predict the transition to stage 2 and associated evaporative losses, we developed an analytical solution for evaporation dynamics with concurrent internal drainage. Expectedly, evaporative losses are suppressed when drainage is considered to different degrees depending on soil type and wetness. We observe that high initial water content supports rapid drainage and thus promotes the sheltering of soil water below the evaporation depth. The solution and laboratory experiments confirm nonlinear relationship between initial water content and total evaporative losses. The concept contributes to establishing bounds on regional surface evaporation considering rainfall characteristics and soil types.

Control of Eolian soil erosion from waste site surface barriers

International Nuclear Information System (INIS)

Ligotke, M.W.

1994-11-01

Physical models were tested in a wind tunnel to determine optimum surface-ravel admixtures for protecting silt-loam soil from erosion by, wind and saltating, sand stresses. The tests were performed to support the development of a natural-material surface barrier for and waste sites. Plans call for a 2-m deep silt-loam soil reservoir to retain infiltrating water from rainfall and snowmelt. The objective of the study was to develop a gravel admixture that would produce an erosion-resistant surface layer during, periods of extended dry climatic stress. Thus, tests were performed using simulated surfaces representing dry, unvegetated conditions present just after construction, after a wildfire, or during an extended drought. Surfaces were prepared using silt-loam soil mixed with various grades of sand and Travel. Wind-induced surface shear stresses were controlled over the test surfaces, as were saltating, sand mass flow rates and intensities. Tests were performed at wind speeds that approximated and exceeded local 100-year peak gust intensities. Surface armors produced by pea gravel admixtures were shown to provide the best protection from wind and saltating sand stresses. Compared with unprotected silt-loam surfaces, armored surfaces reduced erosion rates by more than 96%. Based in part on wind tunnel results, a pea gravel admixture of 15% will be added to the top 1 in of soil in a prototype barrier under construction in 1994. Field tests are planned at the prototype site to provide data for comparison with wind tunnel results

Temperature response of denitrification rate and greenhouse gas production in agricultural river marginal wetland soils.

Science.gov (United States)

Bonnett, S A F; Blackwell, M S A; Leah, R; Cook, V; O'Connor, M; Maltby, E

2013-05-01

Soils are predicted to exhibit significant feedback to global warming via the temperature response of greenhouse gas (GHG) production. However, the temperature response of hydromorphic wetland soils is complicated by confounding factors such as oxygen (O2 ), nitrate (NO3-) and soil carbon (C). We examined the effect of a temperature gradient (2-25 °C) on denitrification rates and net nitrous oxide (N2 O), methane (CH4 ) production and heterotrophic respiration in mineral (Eutric cambisol and Fluvisol) and organic (Histosol) soil types in a river marginal landscape of the Tamar catchment, Devon, UK, under non-flooded and flooded with enriched NO3- conditions. It was hypothesized that the temperature response is dependent on interactions with NO3--enriched flooding, and the physicochemical conditions of these soil types. Denitrification rate (mean, 746 ± 97.3 μg m(-2)  h(-1) ), net N2 O production (mean, 180 ± 26.6 μg m(-2)  h(-1) ) and net CH4 production (mean, 1065 ± 183 μg m(-2)  h(-1) ) were highest in the organic Histosol, with higher organic matter, ammonium and moisture, and lower NO3- concentrations. Heterotrophic respiration (mean, 127 ± 4.6 mg m(-2)  h(-1) ) was not significantly different between soil types and dominated total GHG (CO2 eq) production in all soil types. Generally, the temperature responses of denitrification rate and net N2 O production were exponential, whilst net CH4 production was unresponsive, possibly due to substrate limitation, and heterotrophic respiration was exponential but limited in summer at higher temperatures. Flooding with NO3- increased denitrification rate, net N2 O production and heterotrophic respiration, but a reduction in net CH4 production suggests inhibition of methanogenesis by NO3- or N2 O produced from denitrification. Implications for management and policy are that warming and flood events may promote microbial interactions in soil between distinct microbial communities and increase

Effects of Near Soil Surface Characteristics on the Soil Detachment Process in a Chronological Series of Vegetation Restoration

Science.gov (United States)

Wang, Bing

2017-04-01

The effects of near soil surface characteristics on the soil detachment process might be different at different stages of vegetation restoration. This study was performed to investigate the effects of the near soil surface factors of plant litter, biological soil crusts (BSCs), dead roots and live roots on the soil detachment process by overland flow at different stages of restoration. Soil samples (1 m long, 0.1 m wide, and 0.05 m high) under four treatment conditions were collected from 1-yr-old and 24-yr-old natural grasslands and subjected to flow scouring under five different shear stresses ranging from 5.3 to 14.6 Pa. The results indicated that the effects of near soil surface characteristics on soil detachment were substantial during the process of vegetation restoration. The total reduction in the soil detachment capacity of the 1-yr-old grassland was 98.1%, and of this total, 7.9%, 30.0% and 60.2% was attributed to the litter, BSCs and plant roots, respectively. In the 24-yr-old grassland, the soil detachment capacity decreased by 99.0%, of which 13.2%, 23.5% and 62.3% was caused by the litter, BSCs and plant roots, respectively. Combined with the previously published data of a 7-yr-old grassland, the influence of plant litter on soil detachment was demonstrated to increase with restoration time, but soil detachment was also affected by the litter type and composition. The role of BSCs was greater than that of plant litter in reducing soil detachment during the early stages of vegetation recovery. However, its contribution weakened with time since restoration. The influence of plant roots accounted for at least half or up to two-thirds of the total near soil surface factors, of which more than 72.6% was attributed to the physical binding effects of the roots. The chemical bonding effect of the roots increased with time since restoration and was greater than the effect of the litter on soil detachment in the late stages of vegetation restoration. The

Linking soil type and rainfall characteristics towards estimation of surface evaporative capacitance

Science.gov (United States)

Or, D.; Bickel, S.; Lehmann, P.

2017-12-01

Separation of evapotranspiration (ET) to evaporation (E) and transpiration (T) components for attribution of surface fluxes or for assessment of isotope fractionation in groundwater remains a challenge. Regional estimates of soil evaporation often rely on plant-based (Penman-Monteith) ET estimates where is E is obtained as a residual or a fraction of potential evaporation. We propose a novel method for estimating E from soil-specific properties, regional rainfall characteristics and considering concurrent internal drainage that shelters soil water from evaporation. A soil-dependent evaporative characteristic length defines a depth below which soil water cannot be pulled to the surface by capillarity; this depth determines the maximal soil evaporative capacitance (SEC). The SEC is recharged by rainfall and subsequently emptied by competition between drainage and surface evaporation (considering canopy interception evaporation). We show that E is strongly dependent on rainfall characteristics (mean annual, number of storms) and soil textural type, with up to 50% of rainfall lost to evaporation in loamy soil. The SEC concept applied to different soil types and climatic regions offers direct bounds on regional surface evaporation independent of plant-based parameterization or energy balance calculations.

Migration of radionuclides in sub-surface soil

International Nuclear Information System (INIS)

Bachhuber, H.; Bunzl, K.; Dietl, F.; Kretner, R.; Schimmack, W.; Schultz, W.

1981-08-01

The object of the investigations was to draw the most realistic conclusions about the spreading rate of the radionuclides Sr, I, Cs and Ce in a model accident contaminating the earth surface for various subsurface soils taken from the environment of the Gorleben salt done. The retardation factors were hence determined for these radionuclides in columntests in undisturbed soil samples and the distribution coefficients determined in disturbed soil samples by shaking tests (batch method). The following mobility series can be given very globally for the examined soil profiles where especially columnar-results had been used: Ranker (Trebel) J > Sr > Ce > Cs, Podsol (Gorleben) J > Cs > Sr > Ce, Braunerde (Bruenkendorf) J approx. >= Sr > Ce approx. >= Cs. Arable Soils: Podsol (Gorleben) J > Sr > Cs > Ce, Parabraunerde (Eschweiler) J > Sr > Ce approx. >= Cs. (orig./HP) [de

Soil surface CO2 fluxes and the carbon budget of a grassland

Science.gov (United States)

Norman, J. M.; Garcia, R.; Verma, S. B.

1992-01-01

Measurements of soil surface CO2 fluxes are reported for three sites within the First International Satellite Land Surface Climatology Project (ISLSCP) Field Experiment (FIFE) area, and simple empirical equations are fit to the data to provide predictions of soil fluxes from environmental observations. A prototype soil chamber, used to make the flux measurements, is described and tested by comparing CO2 flux measurements to a 40-L chamber, a 1-m/cu chamber, and eddy correlation. Results suggest that flux measurements with the prototype chamber are consistent with measurements by other methods to within about 20 percent. A simple empirical equation based on 10-cm soil temperature, 0- to 10-cm soil volumetric water content, and leaf area index predicts the soil surface CO2 flux with a rms error of 1.2 micro-mol sq m/s for all three sites. Further evidence supports using this equation to evaluate soil surface CO2 during the 1987 FIFE experiment. The soil surface CO2 fluxes when averaged over 24 hours are comparable to daily gross canopy photosynthetic rates. For 6 days of data the net daily accumulation of carbon is about 0.6 g CO2 sq m/d; this is only a few percent of the daily gross accumulation of carbon by photosynthesis. As the soil became drier in 1989, the net accumulation of carbon by the prairie increased, suggesting that the soil flux is more sensitive to temperature and drought than the photosynthetic fluxes.

Heterotrophic bacteria associated with the green alga

NARCIS (Netherlands)

Ismail, A.; Ktari, L.; Ahmed, M.; Bolhuis, H.; Bouhaouala-Zahar, B.; Stal, L.J.; Boudabbous, A.; El Bour, M.

2018-01-01

Heterotrophic bacteria associated with the green alga Ulva rigida, collected from the coast of Tunisia, were isolated andsubsequently identified by their 16S rRNA gene sequences and by phylogenetic analysis. The 71 isolates belong to four phyla:Proteobacteria (Alpha-and Gamma- subclasses),

An experimental study on mass loading of soil particles on plant surfaces

International Nuclear Information System (INIS)

Li, J.; Gerzabek, M.H.; Mueck, K.

1994-03-01

Radionuclide contaminated soil adhered to plant surfaces can contribute to human ingestion dose. To determine this contribution, a method of 46 Sc neutron activation analysis was established and tested, by which a detection limit of 0.05 mg soil per g dry plant biomass can be obtained. In the field and greenhouse experiment the mass loading of soil on ryegrass (Lolium perenne L.) and broad bean (Vicia faba L.) was investigated and the contribution from rainsplash and wind erosion were evaluated separately. Soil retained on plant surfaces in field conditions in Seibersdorf/Austria was 5.77 ± 1.44 mg soil per g dry plant for ryegrass and 9.51 ± 0.73 mg soil per g dry plant for broad bean. Estimates of contribution from rainsplash and wind erosion to soil contamination of plant during the experimental period are 68 % and 32 % for broadbean, 47 % and 53 % for ryegrass, respectively. Mass loading results from field studies indicate that soil adhesion on plant surfaces can contribute up to 23 % of plant 137 Cs contamination, the transfer factors modified by mass loading decline differently, depending on 137 Cs concentration of the soil and the soil mass adhered to plant surfaces. (authors)

Controls on surface soil drying rates observed by SMAP and simulated by the Noah land surface model

Science.gov (United States)

Shellito, Peter J.; Small, Eric E.; Livneh, Ben

2018-03-01

Drydown periods that follow precipitation events provide an opportunity to assess controls on soil evaporation on a continental scale. We use SMAP (Soil Moisture Active Passive) observations and Noah simulations from drydown periods to quantify the role of soil moisture, potential evaporation, vegetation cover, and soil texture on soil drying rates. Rates are determined using finite differences over intervals of 1 to 3 days. In the Noah model, the drying rates are a good approximation of direct soil evaporation rates, and our work suggests that SMAP-observed drying is also predominantly affected by direct soil evaporation. Data cover the domain of the North American Land Data Assimilation System Phase 2 and span the first 1.8 years of SMAP's operation. Drying of surface soil moisture observed by SMAP is faster than that simulated by Noah. SMAP drying is fastest when surface soil moisture levels are high, potential evaporation is high, and when vegetation cover is low. Soil texture plays a minor role in SMAP drying rates. Noah simulations show similar responses to soil moisture and potential evaporation, but vegetation has a minimal effect and soil texture has a much larger effect compared to SMAP. When drying rates are normalized by potential evaporation, SMAP observations and Noah simulations both show that increases in vegetation cover lead to decreases in evaporative efficiency from the surface soil. However, the magnitude of this effect simulated by Noah is much weaker than that determined from SMAP observations.

Exploiting Soil Moisture, Precipitation, and Streamflow Observations to Evaluate Soil Moisture/Runoff Coupling in Land Surface Models

Science.gov (United States)

Crow, W. T.; Chen, F.; Reichle, R. H.; Xia, Y.; Liu, Q.

2018-05-01

Accurate partitioning of precipitation into infiltration and runoff is a fundamental objective of land surface models tasked with characterizing the surface water and energy balance. Temporal variability in this partitioning is due, in part, to changes in prestorm soil moisture, which determine soil infiltration capacity and unsaturated storage. Utilizing the National Aeronautics and Space Administration Soil Moisture Active Passive Level-4 soil moisture product in combination with streamflow and precipitation observations, we demonstrate that land surface models (LSMs) generally underestimate the strength of the positive rank correlation between prestorm soil moisture and event runoff coefficients (i.e., the fraction of rainfall accumulation volume converted into stormflow runoff during a storm event). Underestimation is largest for LSMs employing an infiltration-excess approach for stormflow runoff generation. More accurate coupling strength is found in LSMs that explicitly represent subsurface stormflow or saturation-excess runoff generation processes.

Surface runoff and soil erosion by difference of surface cover characteristics using by an oscillating rainfall simulator

Science.gov (United States)

Kim, J. K.; Kim, M. S.; Yang, D. Y.

2017-12-01

Sediment transfer within hill slope can be changed by the hydrologic characteristics of surface material on hill slope. To better understand sediment transfer of the past and future related to climate changes, studies for the changes of soil erosion due to hydrological characteristics changes by surface materials on hill slope are needed. To do so, on-situ rainfall simulating test was conducted on three different surface conditions, i.e. well covered with litter layer condition (a), undisturbed bare condition (b), and disturbed bare condition (c) and these results from rainfall simulating test were compared with that estimated using the Limburg Soil Erosion Model (LISEM). The result from the rainfall simulating tests showed differences in the infiltration rate (a > b > c) and the highest soil erosion rate was occurred on c condition. The result from model also was similar to those from rainfall simulating tests, however, the difference from the value of soil erosion rate between two results was quite large on b and c conditions. These results implied that the difference of surface conditions could change the surface runoff and soil erosion and the result from the erosion model might significantly underestimate on bare surface conditions rather than that from rainfall simulating test.

Nocturnal soil CO2 uptake and its relationship to sub-surface soil and ecosystem carbon fluxes in a Chihuahuan Desert shrubland

Science.gov (United States)

Despite their prevalence, little attention has been given to quantifying aridland soil and ecosystem carbon fluxes over prolonged, annually occurring dry periods. We measured surface soil respiration (Rsoil), volumetric soil moisture and temperature in inter- and under-canopy soils, sub-surface soi...

Incorporating microbial dormancy dynamics into soil decomposition models to improve quantification of soil carbon dynamics of northern temperate forests

Energy Technology Data Exchange (ETDEWEB)

He, Yujie [Purdue Univ., West Lafayette, IN (United States). Dept. of Earth, Atmospheric, and Planetary Sciences; Yang, Jinyan [Univ. of Georgia, Athens, GA (United States). Warnell School of Forestry and Natural Resources; Northeast Forestry Univ., Harbin (China). Center for Ecological Research; Zhuang, Qianlai [Purdue Univ., West Lafayette, IN (United States). Dept. of Earth, Atmospheric, and Planetary Sciences; Purdue Univ., West Lafayette, IN (United States). Dept. of Agronomy; Harden, Jennifer W. [U.S. Geological Survey, Menlo Park, CA (United States); McGuire, Anthony D. [Alaska Cooperative Fish and Wildlife Research Unit, U.S. Geological Survey, Univ. of Alaska, Fairbanks, AK (United States). U.S. Geological Survey, Alaska Cooperative Fish and Wildlife Research Unit; Liu, Yaling [Purdue Univ., West Lafayette, IN (United States). Dept. of Earth, Atmospheric, and Planetary Sciences; Wang, Gangsheng [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Climate Change Science Inst. and Environmental Sciences Division; Gu, Lianhong [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). Environmental Sciences Division

2015-11-20

Soil carbon dynamics of terrestrial ecosystems play a significant role in the global carbon cycle. Microbial-based decomposition models have seen much growth recently for quantifying this role, yet dormancy as a common strategy used by microorganisms has not usually been represented and tested in these models against field observations. Here in this study we developed an explicit microbial-enzyme decomposition model and examined model performance with and without representation of microbial dormancy at six temperate forest sites of different forest types. We then extrapolated the model to global temperate forest ecosystems to investigate biogeochemical controls on soil heterotrophic respiration and microbial dormancy dynamics at different temporal-spatial scales. The dormancy model consistently produced better match with field-observed heterotrophic soil CO₂ efflux (R_H) than the no dormancy model. Our regional modeling results further indicated that models with dormancy were able to produce more realistic magnitude of microbial biomass (<2% of soil organic carbon) and soil R_H (7.5 ± 2.4 PgCyr^-1). Spatial correlation analysis showed that soil organic carbon content was the dominating factor (correlation coefficient = 0.4-0.6) in the simulated spatial pattern of soil R_H with both models. In contrast to strong temporal and local controls of soil temperature and moisture on microbial dormancy, our modeling results showed that soil carbon-to-nitrogen ratio (C:N) was a major regulating factor at regional scales (correlation coefficient = -0.43 to -0.58), indicating scale-dependent biogeochemical controls on microbial dynamics. Our findings suggest that incorporating microbial dormancy could improve the realism of microbial-based decomposition models and enhance the integration of soil experiments and mechanistically based modeling.

Distribution of 137Cs in the Surface Soil of Serpong Nuclear Site

International Nuclear Information System (INIS)

Lubis, E.

2011-01-01

The distribution of 137 Cs in the surface soil layer of Serpong Nuclear Site (SNS) was investigated by field sampling. The Objectives of the investigation is finding the profile of 137 Cs distribution in the surface soil and the T f value that can be used for estimation of radiation dose from livestock product-man pathways. The results indicates that the 137 Cs activity in surface soil of SNS is 0.80 ± 0.29 Bq/kg, much lower than in the Antarctic. The contribution value of 137 Cs from the operation of G.A. Siwabessy Reactor until now is undetectable. The T f of 137 Cs from surface soil to Panisetum Purpureum, Setaria Spha Celata and Imperata Cylindrica grasses were 0.71 ± 0.14, 0.84 ± 0.27 and 0.81 ± 0.11 respectively. The results show that value of the transfer factor of 137 Cs varies between cultivated and uncultivated soil and also with the soils with thick humus. (author)

Distribution of 137Cs In the Surface Soil of Serpong Nuclear Site

Directory of Open Access Journals (Sweden)

E. Lubis

2011-08-01

Full Text Available The distribution of 137Cs in the surface soil layer of Serpong Nuclear Site (SNS was investigated by field sampling. The Objectives of the investigation is finding the profile of 137Cs distribution in the surface soil and the Tf value that can be used for estimation of radiation dose from livestock product-man pathways. The results indicates that the 137Cs activity in surface soil of SNS is 0.80 ± 0,29 Bq/kg, much lower than in the Antarctic. The contribution value of 137Cs from the operation of G.A.Siwabessy Reactor until now is undetectable. The Tf of 137Cs from surface soil to Panisetum Purpureum, Setaria Spha Celata and Imperata Cylindrica grasses were 0.71 ± 0.14, 0.84 ± 0.27 and 0.81 ± 0.11 respectively. The results show that value of the transfer factor of 137Cs varies between cultivated and uncultivated soil and also with the soils with thick humus

Survey on Heterotrophic Bacterial Contamination in Bottled Mineral Water by Culture Method

Directory of Open Access Journals (Sweden)

Essmaeel Ghorbanalinezhad

2014-12-01

Full Text Available Background and Aim: This project focuses on the level of heterotrophic baceria in bottled mineral water which could be a health concern for the elderly, infants, pregnant women and immuno-compromised patients. Materials and Methods: Different brands of bottled water samples were selected randomly and evaluated for their bacteriological quality, using different specific culture media and biochemical tests. Water samples were analyzed within 24 hours of their purchase/collection. Samples were filtered with 0.45 micron and filters were plated in different media. Then media were incubated at 37˚C for 24-48 hours. Results: Morphological study and biochemical tests revealed a number of bacteria in different   brands of  bottled water. Heterotrophic bacteria(Gram positive cocci, Spore forming gram positive bacilli, non spore forming gram positive bacilli, gram negative bacilli, and gram negative coccobacilli; Pseudomonas and Stenotrophomonas counted in 70% of bottled water samples. There were no cases of fecal contamination or the presence of E.coli. Conclusions: Bottled water is not sterile and contains trace amounts of bacteria naturally present or introduced during processing. Testing drinking water for all possible pathogens is complex, time-consuming, and expensive. If only total coliform bacteria are detected in drinking water, the source is probably environmental. Since the significance of non-pathogenic heterotrophic bacteria in relation to health and diseases is not understood, there is an urgent need to establish a maximum limit for the heterotrophic count in the bottled mineral water. Growth conditions play a critical role in the recovery of heterotrophic bacteria in bottled drinking water.

A radiosity-based model to compute the radiation transfer of soil surface

Science.gov (United States)

Zhao, Feng; Li, Yuguang

2011-11-01

A good understanding of interactions of electromagnetic radiation with soil surface is important for a further improvement of remote sensing methods. In this paper, a radiosity-based analytical model for soil Directional Reflectance Factor's (DRF) distributions was developed and evaluated. The model was specifically dedicated to the study of radiation transfer for the soil surface under tillage practices. The soil was abstracted as two dimensional U-shaped or V-shaped geometric structures with periodic macroscopic variations. The roughness of the simulated surfaces was expressed as a ratio of the height to the width for the U and V-shaped structures. The assumption was made that the shadowing of soil surface, simulated by U or V-shaped grooves, has a greater influence on the soil reflectance distribution than the scattering properties of basic soil particles of silt and clay. Another assumption was that the soil is a perfectly diffuse reflector at a microscopic level, which is a prerequisite for the application of the radiosity method. This radiosity-based analytical model was evaluated by a forward Monte Carlo ray-tracing model under the same structural scenes and identical spectral parameters. The statistics of these two models' BRF fitting results for several soil structures under the same conditions showed the good agreements. By using the model, the physical mechanism of the soil bidirectional reflectance pattern was revealed.

Soil erosion rates from mixed soil and gravel surfaces in a wind tunnel: A preliminary report

International Nuclear Information System (INIS)

Ligotke, M.W.

1988-12-01

Tests of wind erosion were performed in a controlled-environment wind tunnel to support the development of natural-material protective barriers for long-term isolation of radioactive waste. Barrier performance standards currently being developed for internal and external barrier performance are expected to mandate a surface layer that is resistant to wind erosion. The purpose of this study was to initiate a series of tests to determine suitable soil and gravel mixtures for such a barrier and to test worst-case surface layer conditions under the influence of high wind speeds. Six mixed soil and gravel surfaces were prepared, weathered to represent natural wind-blown desert areas, and subjected to controlled wind erosion forces in a wind tunnel. The applied erosive forces, including surface shear forces, were characterized to provide a means of relating wind tunnel results with actual field conditions. Soil particle losses from the surfaces caused by suspension, saltation, and surface creep were monitored by aerosol sample probes and mass balance measurements. 23 refs., 22 figs., 3 tabs

[Effects of drip irrigation with plastic mulching on the net primary productivity, soil heterotrophic respiration, and net CO2 exchange flux of cotton field ecosystem in Xinjiang, Northwest China].

Science.gov (United States)

Li, Zhi-Guo; Zhang, Run-Hua; Lai, Dong-Mei; Yan, Zheng-Yue; Jiang, Li; Tian, Chang-Yan

2012-04-01

In April-October, 2009, a field experiment was conducted to study the effects of drip irrigation with plastic mulching (MD) on the net primary productivity (NPP), soil heterotrophic respiration (Rh) , and net CO2 exchange flux (NEF(CO2)) of cotton field ecosystem in Xinjiang, taking the traditional flood irrigation with no mulching (NF) as the control. With the increasing time, the NPP, Rh, and NEF(CO2) in treatments MD and NF all presented a trend of increasing first and decreased then. As compared with NF, MD increased the aboveground and belowground biomass and the NPP of cotton, and decreased the Rh. Over the whole growth period, the Rh in treatment MD (214 g C x m(-2)) was smaller than that in treatment NF (317 g C x m(-2)), but the NEF(CO2) in treatment MD (1030 g C x m(-2)) was higher than that in treatment NF (649 g C x m(-2)). Treatment MD could fix the atmospheric CO2 approximately 479 g C x m(-2) higher than treatment NF. Drip irrigation with plastic mulching could promote crop productivity while decreasing soil CO2 emission, being an important agricultural measure for the carbon sequestration and emission reduction of cropland ecosystems in arid area.

Using lagged dependence to identify (de)coupled surface and subsurface soil moisture values

Science.gov (United States)

Carranza, Coleen D. U.; van der Ploeg, Martine J.; Torfs, Paul J. J. F.

2018-04-01

Recent advances in radar remote sensing popularized the mapping of surface soil moisture at different spatial scales. Surface soil moisture measurements are used in combination with hydrological models to determine subsurface soil moisture values. However, variability of soil moisture across the soil column is important for estimating depth-integrated values, as decoupling between surface and subsurface can occur. In this study, we employ new methods to investigate the occurrence of (de)coupling between surface and subsurface soil moisture. Using time series datasets, lagged dependence was incorporated in assessing (de)coupling with the idea that surface soil moisture conditions will be reflected at the subsurface after a certain delay. The main approach involves the application of a distributed-lag nonlinear model (DLNM) to simultaneously represent both the functional relation and the lag structure in the time series. The results of an exploratory analysis using residuals from a fitted loess function serve as a posteriori information to determine (de)coupled values. Both methods allow for a range of (de)coupled soil moisture values to be quantified. Results provide new insights into the decoupled range as its occurrence among the sites investigated is not limited to dry conditions.

Heterogeneity of soil surface temperature induced by xerophytic ...

Indian Academy of Sciences (India)

The diurnal maximum and diurnal variations of soil surface temperatures under canopy vary strongly with different .... elevation of 1300 m above sea level), located at the southeastern fringe of ... cipitation is the only source of soil water replenish- ment. ...... 2001 Effects of nutrients and shade on tree-grass inter- actions in an ...

Phototrophic biofilms of restored fields in the Rhenish lignite mining area: development of soil algal, bacterial, and fungal biomasses

Energy Technology Data Exchange (ETDEWEB)

Jahnke, K.; Priefer, U.B. [Rhein Westfal TH Aachen, Aachen (Germany)

2002-07-01

The formation of phototrophic biofilms in three fields under restoration of a lignite-mining area was recorded over 3 years of lucerne cultivation in terms of biomass carbon from algae, bacteria and fungi. The primary phase of biofilm development on the humus- and nitrogen deficient uppermost soil surfaces was dominated by algae. The ratio of algal carbon to heterotrophic bacterial and fungal carbon ranged from 1:0.4 to 1:2. Only during this initial developmental stage did the total microfloral carbon exceed 10% of the overall organic carbon content. With time, the ratios between algal and heterotrophic microbial carbon increased to 1:10 which was mainly due to decomposed plant residues and humus accumulation supporting the growth of bacteria and fungi. At this later stage of field development the calculated amount of bacterial and fungal carbon associated with the algae was still at least 8% of total heterotrophic microbial carbon and could even reach 20%. Bacterial and fungal biomasses were primarily governed by the organic carbon content (r = 0.81), but fluctuations-up to 50% and occurring mostly simultaneously for the three microfloral members-were observed in response to temperature and moisture conditions. The calculated in situ doubling times were 8 days (algae), 9 days (bacteria) and 14 days (fungi), respectively. Insight is given into the dynamics of phototrophic biofilm development and the abiotic factors affecting them during early phases of arable soil restoration. The results indicate that biomass changes expressed as the respective ratios between their microfloral members are a useful tool to characterise the different developmental stages of terrestrial biofilms.

Production of heterotrophic bacteria inhabiting macroscopic organic aggregates (marine snow) from surface waters

International Nuclear Information System (INIS)

Alldredge, A.L.; Cole, J.J.; Caron, D.A.

1986-01-01

Macroscopic detrital aggregates, known as marine snow, are a ubiquitous and abundant component of the marine pelagic zone. Descriptions of microbial communities occurring at densities 2-5 orders of magnitude higher on these particles than in the surrounding seawater have led to the suggestion that marine snow may be a site of intense heterotrophic activity. The authors tested this hypothesis using incorporation of [ 3 H]thymidine into macromolecules as a measure of bacterial growth occurring on marine snow from oceanic waters in the North Atlantic and from neritic waters off southern California. Abundances of marine snow ranged from 0.1 to 4.3 aggregates per liter. However, only 0.1-4% ration per cell on aggregates was generally equal to or lower than that of bacteria found free-living in the surrounding seawater, indicating that attached bacteria were not growing more rapidly than free-living bacteria. Bacteria inhabiting aggregates were up to 25 times larger than free-living forms

Soil surface CO2 fluxes on the Konza Prairie

Science.gov (United States)

Norman, J. M.; Garcia, R.; Verma, Shoshi B.

1990-01-01

The utilization of a soil chamber to measure fluxes of soil-surface CO2 fluxes is described in terms of equipment, analytical methods, and estimate quality. A soil chamber attached to a gas-exchange system measures the fluxes every 5-15 min, and the data are compared to measurements of the CO2 fluxes from the canopy and from the soil + canopy. The soil chamber yields good measurements when operated in a closed system that is ported to the free atmosphere, and the CO2 flux is found to have a diurnal component.

Effect of Management Practices on Soil Microstructure and Surface Microrelief

Directory of Open Access Journals (Sweden)

R. Garcia Moreno

2012-01-01

Full Text Available Soil surface roughness (SSR and porosity were evaluated from soils located in two farms belonging to the Plant Breeding Institute of the University of Sidney. The sites differ in their soil management practices; the first site (PBI was strip-tilled during early fall (May 2010, and the second site (JBP was under power harrowed tillage at the end of July 2010. Both sites were sampled in mid-August. At each location, SSR was measured for three 1 m2 subplots using shadow analysis. To evaluate porosity and aggregation, soil samples were scanned using X-ray computed tomography with 5 μm resolution. The results show a strong negative correlation between SSR and porosity, 20.13% SSR and 41.38% porosity at PBI versus 42.00% SSR and 18.35% porosity at JBP. However, soil images show that when soil surface roughness is higher due to conservation and soil management practices, the processes of macroaggregation and structural porosity are enhanced. Further research must be conducted on SSR and porosity in different types of soils, as they provide complementary information on the evaluation of soil erosion susceptibility.

Nutrient and media recycling in heterotrophic microalgae cultures.

Science.gov (United States)

Lowrey, Joshua; Armenta, Roberto E; Brooks, Marianne S

2016-02-01

In order for microalgae-based processes to reach commercial production for biofuels and high-value products such as omega-3 fatty acids, it is necessary that economic feasibility be demonstrated at the industrial scale. Therefore, process optimization is critical to ensure that the maximum yield can be achieved from the most efficient use of resources. This is particularly true for processes involving heterotrophic microalgae, which have not been studied as extensively as phototrophic microalgae. An area that has received significant conceptual praise, but little experimental validation, is that of nutrient recycling, where the waste materials from prior cultures and post-lipid extraction are reused for secondary fermentations. While the concept is very simple and could result in significant economic and environmental benefits, there are some underlying challenges that must be overcome before adoption of nutrient recycling is viable at commercial scale. Even more, adapting nutrient recycling for optimized heterotrophic cultures presents some added challenges that must be identified and addressed that have been largely unexplored to date. These challenges center on carbon and nitrogen recycling and the implications of using waste materials in conjunction with virgin nutrients for secondary cultures. The aim of this review is to provide a foundation for further understanding of nutrient recycling for microalgae cultivation. As such, we outline the current state of technology and practical challenges associated with nutrient recycling for heterotrophic microalgae on an industrial scale and give recommendations for future work.

Global characterization of surface soil moisture drydowns

Science.gov (United States)

McColl, Kaighin A.; Wang, Wei; Peng, Bin; Akbar, Ruzbeh; Short Gianotti, Daniel J.; Lu, Hui; Pan, Ming; Entekhabi, Dara

2017-04-01

Loss terms in the land water budget (including drainage, runoff, and evapotranspiration) are encoded in the shape of soil moisture "drydowns": the soil moisture time series directly following a precipitation event, during which the infiltration input is zero. The rate at which drydowns occur—here characterized by the exponential decay time scale τ—is directly related to the shape of the loss function and is a key characteristic of global weather and climate models. In this study, we use 1 year of surface soil moisture observations from NASA's Soil Moisture Active Passive mission to characterize τ globally. Consistent with physical reasoning, the observations show that τ is lower in regions with sandier soils, and in regions that are more arid. To our knowledge, these are the first global estimates of τ—based on observations alone—at scales relevant to weather and climate models.

Residues of endosulfan in surface and subsurface agricultural soil and its bioremediation.

Science.gov (United States)

Odukkathil, Greeshma; Vasudevan, Namasivayam

2016-01-01

The persistence of many hydrophobic pesticides has been reported by various workers in various soil environments and its bioremediation is a major concern due to less bioavailability. In the present study, the pesticide residues in the surface and subsurface soil in an area of intense agricultural activity in Pakkam Village of Thiruvallur District, Tamilnadu, India, and its bioremediation using a novel bacterial consortium was investigated. Surface (0-15 cm) and subsurface soils (15-30 cm and 30-40 cm) were sampled, and pesticides in different layers of the soil were analyzed. Alpha endosulfan and beta endosulfan concentrations ranged from 1.42 to 3.4 mg/g and 1.28-3.1 mg/g in the surface soil, 0.6-1.4 mg/g and 0.3-0.6 mg/g in the subsurface soil (15-30 cm), and 0.9-1.5 mg/g and 0.34-1.3 mg/g in the subsurface soil (30-40 cm) respectively. Residues of other persistent pesticides were also detected in minor concentrations. These soil layers were subjected to bioremediation using a novel bacterial consortium under a simulated soil profile condition in a soil reactor. The complete removal of alpha and beta endosulfan was observed over 25 days. Residues of endosulfate were also detected during bioremediation, which was subsequently degraded on the 30th day. This study revealed the existence of endosulfan in the surface and subsurface soils and also proved that the removal of such a ubiquitous pesticide in the surface and subsurface environment can be achieved in the field by bioaugumenting a biosurfactant-producing bacterial consortium that degrades pesticides. Copyright © 2015 Elsevier Ltd. All rights reserved.

Distribution of technetium-99 in surface soils

International Nuclear Information System (INIS)

Tagami, Keiko; Uchida, Shigeo

2000-01-01

Technetium-99 ( 99 Tc) is an important fission product which has been widely distributed in the environment as a result of fallout from nuclear weapons testing. In order to improve our understanding of the behavior of 99 Tc in the environment, it is essential that we obtain more reliable information on the levels, distribution and fate of 99 Tc in the environment. In this study, the concentration of global fallout 99 Tc, in several surface soil samples (0 - 20 cm) collected in Japan, were determined by ICP-MS (inductively coupled plasma mass spectroscopy). The range of 99 Tc in rice paddy field, upland field and other soils determined in this study were 0.006 - 0.11, 0.004 - 0.008 and 0.007 - 0.02 Bq kg -1 dry, respectively. 137 Cs was used as a comparative indicator for the source of 99 Tc, because the fission yields from 235 U and 239 Pu were about the same (ca. 6%) for the two isotopes, and the behavior and distribution of 137 Cs in the environment is reasonably well understood. The 137 Cs contents in rice paddy field, upland field and other soils range between 1.7 - 28, 1.4 - 9.2 and -1 dry, respectively. The activity ratios of 99 Tc/ 137 Cs in all soil samples were (0.6 - 5.9) x 10 -3 . Most of the measured ratios were one order of magnitude higher than the theoretical one obtained from fission. However, this ratio in soil, presumably depends on not only both the characteristic of radionuclides and the soil, but also on their contents after deposition to the earth's surface. (author)

Mineralogical and geochemical patterns of urban surface soils, the example of Pforzheim, Germany

International Nuclear Information System (INIS)

Norra, Stefan; Lanka-Panditha, Mahesh; Kramar, Utz; Stueben, Doris

2006-01-01

This study presents a combined geochemical and mineralogical survey of urban surface soils. Many studies on urban soils are restricted to purely chemical surveys in order to investigate soil pollution caused by anthropogenic activities such as traffic, heating, industrial processing, waste disposal and many more. In environmental studies, chemical elements are often distinguished as lithogenic and anthropogenic elements. As a novel contribution to those studies, the authors combined the analysis of a broad set of chemical elements with the analysis of the main mineralogical phases. The semi-quantification of mineralogical phases supported the assignment of groups of chemical elements to lithogenic or anthropogenic origin. Minerals are important sinks for toxic elements. Thus, knowledge about their distribution in soils is crucial for the assessment of the environmental hazards due to pollution of urban soils. In Pforzheim, surface soils (0-5 cm depth) from various land use types (forest, agriculture, urban green space, settlement areas of various site densities) overlying different geological units (clastic and chemical sediments) were investigated. Urban surface soils of Pforzheim reflect to a considerable degree the mineral and chemical composition of parent rocks. Irrespective of the parent rocks, elevated concentrations of heavy metals (Zn, Cu, Pb, Sn, Ag) were found in soils throughout the whole inner urban settlement area of Pforzheim indicating pollution. These pollutants will tend to accumulate in inner urban surface soils according to the available adsorption capacity, which is normally higher in soils overlying limestone than in soils overlying sandstone. However, inner urban surface soils overlying sandstone show elevated concentrations of carbonates, phyllo-silicates and Fe and elevated pH values compared with forest soils overlying sandstone. Thus, in comparison to forest soils overlying sandstones, inner urban soils overlying sandstone affected by

Contribution of orchardgrass and white clover roots to total soil respiration

Science.gov (United States)

Understanding ecosystem carbon dioxide flux requires knowledge of component fluxes including photosynthetic uptake and respiratory loss. Experimental separation of soil respiration into its heterotrophic and autotrophic components has been difficult, complicating efforts to quantify management and e...

Pack hunting by a common soil amoeba on nematodes

NARCIS (Netherlands)

Geisen, Stefan; Rosengarten, J.; Koller, R.; Mulder, Christian; Urich, T.; Bonkowski, M.

2015-01-01

Soils host the most complex communities on Earth,
including the most diverse and abundant eukaryotes,
i.e. heterotrophic protists. Protists are generally con-
sidered as bacterivores, but evidence for negative
interactions with nematodes both from laboratory and
field studies

Threshold concentration of glucose for bacterial growth in soil

NARCIS (Netherlands)

Reischke, Stephanie; Kumar, Manoj G.K.; Baath, Erland

The activity of heterotrophic soil microorganisms is usually limited by the availability and quality of carbon (C). Adding organic substances will thus trigger a microbial response. We studied the response in bacterial growth and respiration after the addition of low amounts of glucose. First we

Combined Radar-Radiometer Surface Soil Moisture and Roughness Estimation

Science.gov (United States)

Akbar, Ruzbeh; Cosh, Michael H.; O'Neill, Peggy E.; Entekhabi, Dara; Moghaddam, Mahta

2017-01-01

A robust physics-based combined radar-radiometer, or Active-Passive, surface soil moisture and roughness estimation methodology is presented. Soil moisture and roughness retrieval is performed via optimization, i.e., minimization, of a joint objective function which constrains similar resolution radar and radiometer observations simultaneously. A data-driven and noise-dependent regularization term has also been developed to automatically regularize and balance corresponding radar and radiometer contributions to achieve optimal soil moisture retrievals. It is shown that in order to compensate for measurement and observation noise, as well as forward model inaccuracies, in combined radar-radiometer estimation surface roughness can be considered a free parameter. Extensive Monte-Carlo numerical simulations and assessment using field data have been performed to both evaluate the algorithms performance and to demonstrate soil moisture estimation. Unbiased root mean squared errors (RMSE) range from 0.18 to 0.03 cm3cm3 for two different land cover types of corn and soybean. In summary, in the context of soil moisture retrieval, the importance of consistent forward emission and scattering development is discussed and presented.

Components of Soil Respiration and its Monthly Dynamics in Rubber Plantation Ecosystems

OpenAIRE

Zhixiang Wu; Limin Guan; Bangqian Chen; Chuan Yang; Guoyu Lan; Guishui Xie; Zhaode Zhou

2014-01-01

Aim: Our objective was to quantify four components and study effect factors of soil respiration in rubber plantation ecosystems. Providing the basic data support for the establishment of the trade of rubber plantation ecosystem carbon source/sink. Methods: We used Li-6400 (IRGA, Li-COR) to quantitate four components of soil respiration in rubber plantation ecosystems at different ages. Soil respiration can be separated as four components: heterotrophic respiration (Rh), Respiration of roots (...

Sources of CO2 efflux from soil and review of partitioning methods

International Nuclear Information System (INIS)

Kuzyakov, Y.

2006-01-01

Five main biogenic sources of CO 2 efflux from soils have been distinguished and described according to their turnover rates and the mean residence time of carbon. They are root respiration, rhizomicrobial respiration, decomposition of plant residues, the priming effect induced by root exudation or by addition of plant residues, and basal respiration by microbial decomposition of soil organic matter (SOM). These sources can be grouped in several combinations to summarize CO 2 efflux from the soil including: root-derived CO 2 , plant-derived CO 2 , SOM-derived CO 2 , rhizosphere respiration, heterotrophic microbial respiration (respiration by heterotrophs), and respiration by autotrophs. These distinctions are important because without separation of SOM-derived CO 2 from plant-derived CO 2 , measurements of total soil respiration have very limited value for evaluation of the soil as a source or sink of atmospheric CO 2 and for interpreting the sources of CO 2 and the fate of carbon within soils and ecosystems. Additionally, the processes linked to the five sources of CO 2 efflux from soil have various responses to environmental variables and consequently to global warming. This review describes the basic principles and assumptions of the following methods which allow SOM-derived and root-derived CO 2 efflux to be separated under laboratory and field conditions: root exclusion techniques, shading and clipping, tree girdling, regression, component integration, excised roots and in situ root respiration; continuous and pulse labeling, 13 C natural abundance and FACE, and radiocarbon dating and bomb- 14 C. A short sections cover the separation of the respiration of autotrophs and that of heterotrophs, i.e. the separation of actual root respiration from microbial respiration, as well as methods allowing the amount of CO 2 evolved by decomposition of plant residues and by priming effects to be estimated. All these methods have been evaluated according to their inherent

Development of a laboratory model of a phototroph-heterotroph mixed-species biofilm at the stone/air interface

Directory of Open Access Journals (Sweden)

Federica eVilla

2015-11-01

Full Text Available Recent scientific investigations have shed light on the ecological importance and physiological complexity of subaerial biofilms (SABs inhabiting lithic surfaces. In the field of sustainable cultural heritage (CH preservation, mechanistic approaches aimed at investigation of the spatiotemporal patterns of interactions between the biofilm, the stone, and the atmosphere are of outstanding importance. However, these interactions have proven difficult to explore with field experiments due to the inaccessibility of samples, the complexity of the ecosystem under investigation and the temporal resolution of the experiments.To overcome these limitations, we aimed at developing a unifying methodology to reproduce a fast-growing, phototroph-heterotroph mixed species biofilm at the stone/air interface. Our experiments underscore the ability of the dual-species SAB model to capture functional traits characteristic of biofilms inhabiting lithic substrate such as: i microcolonies of aggregated bacteria; ii network like structure following surface topography; iii cooperation between phototrophs and heterotrophs and cross feeding processes; iv ability to change the chemical parameters that characterize the microhabitats; v survival under desiccation and vi biocide tolerance. With its advantages in control, replication, range of different experimental scenarios and matches with the real ecosystem, the developed model system is a powerful tool to advance our mechanistic understanding of the stone-biofilm-atmosphere interplay in different environments.

Utilization of organic residues using heterotrophic microalgae and insects.

Science.gov (United States)

Pleissner, Daniel; Rumpold, Birgit A

2018-02-01

Various organic residues occur globally in the form of straw, wood, green biomass, food waste, feces, manure etc. Other utilization strategies apart from anaerobic digestion, composting and incineration are needed to make use of the whole potential of organic residues as sources of various value added compounds. This review compares the cultivation of heterotrophic microalgae and insects using organic residues as nutrient sources and illuminates their potential with regard to biomass production, productivity and yield, and utilization strategies of produced biomasses. Furthermore, cultivation processes as well as advantages and disadvantages of utilization processes are identified and discussed. It was shown that both heterotrophic algae and insects are able to reduce a sufficient amount of organic residues by converting it into biomass. The biomass composition of both organisms is similar which allows similar utilization strategies in food and feed, chemicals and materials productions. Even though insect is the more complex organism, biomass production can be carried out using simple equipment without sterilization and hydrolysis of organic residues. Contrarily, heterotrophic microalgae require a pretreatment of organic residues in form of sterilization and in most cases hydrolysis. Interestingly, the volumetric productivity of insect biomass exceeds the productivity of algal biomass. Despite legal restrictions, it is expected that microalgae and insects will find application as alternative food and feed sources in the future. Copyright © 2017 Elsevier Ltd. All rights reserved.

Enumeration and characterization of arsenic-tolerant diazotrophic bacteria in a long-term heavy-metal-contaminated soil

OpenAIRE

Oliveira, A.; Pampulha, M.E.; Neto, M.M.; Almeida, A.C.

2009-01-01

The abundance of arsenic-tolerant diazotrophic bacteria was compared in a long-term contaminated soil versus a non-contaminated one. In addition, the characterization of tolerant diazotrophic bacteria was carried out. Differences in the number of heterotrophic N2 fixers were found between soils. Contaminated soil showed a decrease in the microbial population size of about 80%, confirming the great sensitivity of this group of soil bacteria to metals. However, quantitat...

Distribution of 137Cs in the Surface Soil of Serpong Nuclear Site

OpenAIRE

Lubis, E

2011-01-01

The distribution of 137Cs in the surface soil layer of Serpong Nuclear Site (SNS) was investigated by field sampling. The Objectives of the investigation is finding the profile of 137Cs distribution in the surface soil and the Tf value that can be used for estimation of radiation dose from livestock product-man pathways. The results indicates that the 137Cs activity in surface soil of SNS is 0.80 ± 0,29 Bq/kg, much lower than in the Antarctic. The contribution value of 137Cs from the operatio...

Nitrogen fixation by free-living organisms in rice soils. Studies with 15N

International Nuclear Information System (INIS)

Rao, V.R.; Charyulu, P.B.B.N.; Nayak, D.N.; Ramakrishna, C.

1979-01-01

Heterotrophic nitrogen fixation as influenced by water regime, organic matter, combined nitrogen and pesticides was investigated in several Indian rice soils by means of the 15 N 2 tracer technique. Soil submergence accelerated nitrogen fixation. Addition of cellulose to both non-flooded and flooded soils enhanced nitrogen fixation. Under submerged conditions, addition of sucrose, glucose and malate in that order stimulated nitrogen fixation in alluvial soil, while only sucrose enhanced nitrogen fixation in laterite soil. Nitrogen fixation in flooded alluvial and laterite soils decreased with increasing concentration of combined nitrogen. Nitrogen fixation was appreciable in acid sulphate and saline soils under both flooded and non-flooded conditions, despite high salinity and acidity. Application of certain pesticides at rates equivalent to recommended field level greatly influenced nitrogen fixation in flooded rice soils. Additions of benomyl (carbamate fungicide) and carbofuran (methyl carbamate insecticide) to alluvial and laterite soils resulted in significant stimulation of nitrogen fixation. Gamma-BHC stimulated nitrogen fixation only in alluvial soil, with considerable inhibition in a laterite soil. Nitrogen fixation by Azospirillum lipoferum was investigated by 15 N 2 . Large variations in 15 N 2 incorporation by A. lipoferum isolated from the roots of several rice cultivars was observed. Specific lines of rice harbouring A. lipoferum with high nitrogenase activity might be selected. Nitrogen fixed by heterotrophic organisms in a complex system such as soil could not be evaluated precisely. Indigenous nitrogen fixation in a flooded soil would be in the range of 5-10 kg N/ha, increasable 3 to 4-fold by appropriate fertilizers and cultural practices

Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes.

Directory of Open Access Journals (Sweden)

Caroline Baroukh

2017-06-01

Full Text Available Microalgae are promising microorganisms for the production of numerous molecules of interest, such as pigments, proteins or triglycerides that can be turned into biofuels. Heterotrophic or mixotrophic growth on fermentative wastes represents an interesting approach to achieving higher biomass concentrations, while reducing cost and improving the environmental footprint. Fermentative wastes generally consist of a blend of diverse molecules and it is thus crucial to understand microalgal metabolism in such conditions, where switching between substrates might occur. Metabolic modeling has proven to be an efficient tool for understanding metabolism and guiding the optimization of biomass or target molecule production. Here, we focused on the metabolism of Chlorella sorokiniana growing heterotrophically and mixotrophically on acetate and butyrate. The metabolism was represented by 172 metabolic reactions. The DRUM modeling framework with a mildly relaxed quasi-steady-state assumption was used to account for the switching between substrates and the presence of light. Nine experiments were used to calibrate the model and nine experiments for the validation. The model efficiently predicted the experimental data, including the transient behavior during heterotrophic, autotrophic, mixotrophic and diauxic growth. It shows that an accurate model of metabolism can now be constructed, even in dynamic conditions, with the presence of several carbon substrates. It also opens new perspectives for the heterotrophic and mixotrophic use of microalgae, especially for biofuel production from wastes.

Negative consequences of glacial turbidity for the survival of freshwater planktonic heterotrophic flagellates.

Science.gov (United States)

Sommaruga, Ruben; Kandolf, Georg

2014-02-17

Heterotrophic (phagotrophic) flagellates are key components of planktonic food webs in freshwater and marine ecosystems because they are the main consumers of bacteria. Although they are ubiquitous in aquatic ecosystems, they were numerically undetectable in turbid glacier-fed lakes. Here we show that glacial particles had negative effects on the survival and growth of heterotrophic flagellates. The effect of glacial particles was concentration-dependent and was caused by their interference with bacterial uptake rather than by physical damage. These results are the first to reveal why establishment of heterotrophic flagellates populations is hindered in very turbid glacial lakes. Because glaciers are vanishing around the world, recently formed turbid meltwater lakes represent an excellent opportunity to understand the environmental conditions that probably shaped the establishment of lake communities at the end of the last glaciation.

Salt Efflorescence Effects on Soil Surface Erodibility and Dust Emissions

Science.gov (United States)

Van Pelt, R. S.; Zhang, G.

2017-12-01

Soluble salts resulting from weathering of geological materials often form surface crusts or efflorescences in areas with shallow saline groundwater. In many cases, the affected areas are susceptible to wind erosion due to their lack of protective vegetation and their flat topography. Fugitive dusts containing soluble salts affect the biogeochemistry of deposition regions and may result in respiratory irritation during transport. We created efflorescent crusts on soil trays by surface evaporation of single salt solutions and bombarded the resultant efflorescences with quartz abrader sand in a laboratory wind tunnel. Four replicate trays containing a Torrifluvent soil affected by one of nine salts commonly found in arid and semiarid streams were tested and the emissions were captured by an aspirated multi-stage deposition and filtering system. We found that in most cases the efflorescent crust reduced the soil surface erodibility but also resulted in the emission of salt rich dust. Two of the salts, sodium thiosulfate and calcium chloride, resulted in increased soil volume and erodibility. However, one of the calcium chloride replicates was tested after an outbreak of humid air caused hygroscopic wetting of the soil and it became indurated upon drying greatly decreasing the erodibility. Although saline affected soils are not used for agricultural production and degradation is not a great concern, the release of salt rich dust is an area of environmental concern and steps to control the dust emissions from affected soils should be developed. Future testing will utilize suites of salts found in streams of arid and semiarid regions.

Short Term Soil Respiration Response to Fire in a Semi-arid Ecosystem

Science.gov (United States)

Rozin, A. G.

2015-12-01

In the Intermountain West (USA), fire is an important driver of carbon cycling in the environment. Increasing frequency and severity of fires, either through management actions or wildfires, is expected with changing climates in the Western United States. When burning is used as a management tool, it may be beneficial and control the growth of nuisance vegetation, promote the regeneration of grasses and forage species, and reduce hazardous fuel loads to minimize the risk of future wildfires. However, high intensity wildfires often have a negative effect, resulting in a loss of carbon storage and a shift of vegetation communities. This delays recovery of the ecosystem for years or decades and alters the historic fire regime. A 2000 acre prescribed burn in the Reynolds Creek Critical Zone Observatory provided the opportunity to quantify pre and post-burn soil carbon stores and soil carbon losses by heterotrophic respiration. Pre and post-burn soil samples were collected for physical and biogeochemical characterization to quantify substrate availability and possible limitations for heterotrophic respiration. CO2 fluxes were continuously monitored in situ before and immediately after the fire to understand the short-term response of soil respiration to varying burn severities.

Temporal observations of surface soil moisture using a passive microwave sensor

International Nuclear Information System (INIS)

Jackson, T.J.; O'Neill, P.

1987-01-01

A series of 10 aircraft flights was conducted over agricultural fields to evaluate relationships between observed surface soil moisture and soil moisture predicted using passive microwave sensor observations. An a priori approach was used to predict values of surface soil moisture for three types of fields: tilled corn, no-till corn with soybean stubble, and idle fields with corn stubble. Acceptable predictions were obtained for the tilled corn fields, while poor results were obtained for the others. The source of error is suspected to be the density and orientation of the surface stubble layer; however, further research is needed to verify this explanation. Temporal comparisons between observed, microwave predicted, and soil water-simulated moisture values showed similar patterns for tilled well-drained fields. Divergences between the observed and simulated measurements were apparent on poorly drained fields. This result may be of value in locating and mapping hydrologic contributing areas

Effects of artificial soil surface management on changes of ...

African Journals Online (AJOL)

Studies of size distribution, stability of the aggregates, and other soil properties are very important due to their influence on tilth, water infiltration, and nutrient dynamics and more importantly on accelerated erosion but are affected by soil surface management. Both chemical e.g. pH, organic carbon, (OC), exchangeable ...

Impact of commonly used agrochemicals on bacterial diversity in cultivated soils.

Science.gov (United States)

Ampofo, J A; Tetteh, W; Bello, M

2009-09-01

The effects of three selected agrochemicals on bacterial diversity in cultivated soil have been studied. The selected agrochemicals are Cerox (an insecticide), Ceresate and Paraquat (both herbicides). The effect on bacterial population was studied by looking at the total heterotrophic bacteria presence and the effect of the agrochemicals on some selected soil microbes. The soil type used was loamy with pH of 6.0-7.0. The soil was placed in opaque pots and bambara bean (Vigna subterranean) seeds cultivated in them. The agrochemicals were applied two weeks after germination of seeds at concentrations based on manufacturer's recommendation. Plant growth was assessed by weekly measurement of plant height, foliage appearance and number of nodules formed after one month. The results indicated that the diversity index (Di) among the bacteria populations in untreated soil and that of Cerox-treated soils were high with mean diversity index above 0.95. Mean Di for Ceresate-treated soil was 0.88, and that for Paraquattreated soil was 0.85 indicating low bacterial populations in these treatment-type soils. The study also showed that application of the agrochemicals caused reduction in the number of total heterotrophic bacteria population sizes in the soil. Ceresate caused 82.50% reduction in bacteria number from a mean of 40 × 10(5) cfu g(-1) of soil sample to 70 × 10(4) cfu g(-1). Paraquat-treated soil showed 92.86% reduction, from a mean of 56 × 10(5) cfu g(-1) to 40 × 10(4) cfu g(-1). Application of Cerox to the soil did not have any remarkable reduction in bacterial population number. Total viable cell count studies using Congo red yeast-extract mannitol agar indicated reduction in the number of Rhizobium spp. after application of the agrochemicals. Mean number of Rhizobium population numbers per gram of soil was 180 × 10(4) for the untreated soil. Cerox-treated soil recorded mean number of 138 × 10(4) rhizobial cfu g(-1) of soil, a 23.33% reduction. Ceresate- and

Elevated temperature increases carbon and nitrogen fluxes between phytoplankton and heterotrophic bacteria through physical attachment

KAUST Repository

Arandia-Gorostidi, Nestor

2016-12-06

Quantifying the contribution of marine microorganisms to carbon and nitrogen cycles and their response to predicted ocean warming is one of the main challenges of microbial oceanography. Here we present a single-cell NanoSIMS isotope analysis to quantify C and N uptake by free-living and attached phytoplankton and heterotrophic bacteria, and their response to short-term experimental warming of 4 °C. Elevated temperature increased total C fixation by over 50%, a small but significant fraction of which was transferred to heterotrophs within 12 h. Cell-to-cell attachment doubled the secondary C uptake by heterotrophic bacteria and increased secondary N incorporation by autotrophs by 68%. Warming also increased the abundance of phytoplankton with attached heterotrophs by 80%, and promoted C transfer from phytoplankton to bacteria by 17% and N transfer from bacteria to phytoplankton by 50%. Our results indicate that phytoplankton-bacteria attachment provides an ecological advantage for nutrient incorporation, suggesting a mutualistic relationship that appears to be enhanced by temperature increases.

Elevated temperature increases carbon and nitrogen fluxes between phytoplankton and heterotrophic bacteria through physical attachment

KAUST Repository

Arandia-Gorostidi, Nestor; Weber, Peter K; Alonso-Sá ez, Laura; Moran, Xose Anxelu G.; Mayali, Xavier

2016-01-01

Quantifying the contribution of marine microorganisms to carbon and nitrogen cycles and their response to predicted ocean warming is one of the main challenges of microbial oceanography. Here we present a single-cell NanoSIMS isotope analysis to quantify C and N uptake by free-living and attached phytoplankton and heterotrophic bacteria, and their response to short-term experimental warming of 4 °C. Elevated temperature increased total C fixation by over 50%, a small but significant fraction of which was transferred to heterotrophs within 12 h. Cell-to-cell attachment doubled the secondary C uptake by heterotrophic bacteria and increased secondary N incorporation by autotrophs by 68%. Warming also increased the abundance of phytoplankton with attached heterotrophs by 80%, and promoted C transfer from phytoplankton to bacteria by 17% and N transfer from bacteria to phytoplankton by 50%. Our results indicate that phytoplankton-bacteria attachment provides an ecological advantage for nutrient incorporation, suggesting a mutualistic relationship that appears to be enhanced by temperature increases.

Physically plausible prescription of land surface model soil moisture

Science.gov (United States)

Hauser, Mathias; Orth, René; Thiery, Wim; Seneviratne, Sonia

2016-04-01

Land surface hydrology is an important control of surface weather and climate, especially under extreme dry or wet conditions where it can amplify heat waves or floods, respectively. Prescribing soil moisture in land surface models is a valuable technique to investigate this link between hydrology and climate. It has been used for example to assess the influence of soil moisture on temperature variability, mean and extremes (Seneviratne et al. 2006, 2013, Lorenz et al., 2015). However, perturbing the soil moisture content artificially can lead to a violation of the energy and water balances. Here we present a new method for prescribing soil moisture which ensures water and energy balance closure by using only water from runoff and a reservoir term. If water is available, the method prevents soil moisture decrease below climatological values. Results from simulations with the Community Land Model (CLM) indicate that our new method allows to avoid soil moisture deficits in many regions of the world. We show the influence of the irrigation-supported soil moisture content on mean and extreme temperatures and contrast our findings with that of earlier studies. Additionally, we will assess how long into the 21st century the new method will be able to maintain present-day climatological soil moisture levels for different regions. Lorenz, R., Argüeso, D., Donat, M.G., Pitman, A.J., den Hurk, B.V., Berg, A., Lawrence, D.M., Chéruy, F., Ducharne, A., Hagemann, S. and Meier, A., 2015. Influence of land-atmosphere feedbacks on temperature and precipitation extremes in the GLACE-CMIP5 ensemble. Journal of Geophysical Research: Atmospheres. Seneviratne, S.I., Lüthi, D., Litschi, M. and Schär, C., 2006. Land-atmosphere coupling and climate change in Europe. Nature, 443(7108), pp.205-209. Seneviratne, S.I., Wilhelm, M., Stanelle, T., Hurk, B., Hagemann, S., Berg, A., Cheruy, F., Higgins, M.E., Meier, A., Brovkin, V. and Claussen, M., 2013. Impact of soil moisture

Competition between autotrophic and heterotrophic microbial plankton for inorganic nutrients induced by variability in estuarine biophysicochemical conditions

Science.gov (United States)

Williams, A.; Quigg, A.

2016-02-01

Competition for inorganic nutrients between autotrophic and heterotrophic fractions of microbial plankton (0.2-20μm) was investigated at two stations in a sub-tropical estuary, Galveston Bay, Texas. Competition potential between these groups is enhanced because individuals are similar in size, reducing variability among their nutrient uptake efficiencies. Further, in estuaries, allochthonous supplements to autochthonous carbon may satisfy heterotrophic requirements, allowing alternative factors to limit abundance. The relative abundance of autotrophs and heterotrophs stained with SYBR Green I and enumerated on a Beckman Coulter Gallios flow cytometer were evaluated monthly during a year-long study. Shifts in the relative in situ abundance were significantly related to temperature, dissolved inorganic nitrogen (DIN), phosphorous (Pi), and total organic carbon (TOC) concentrations revealing opposing gradients of limitation by different abiotic factors. In corresponding in vitro nutrient enrichment bioassays the relative contribution of autotrophic or heterotrophic microbial plankton to significant enrichment responses varied. Only during macro- (>20μm) phytoplankton blooms do autotrophic microbial plankton respond to nutrient enrichment. Contrastingly, the heterotrophic microbial plankton responded to nutrient enrichment primarily when temperature limitation was alleviated. Therefore, the potential for autotrophic and heterotrophic microbial plankton competition for limiting nutrients is highest when autotrophic microbial plankton are also competing with larger phytoplankton during bloom events. Based on this evidence, we hypothesize that the autotrophic microbial fraction has a competitive advantage over the heterotrophs for inorganic nutrients in Galveston Bay. The observed microbial competition during estuarine phytoplankton blooms may have important consequences on biogeochemical processes including carbon and nutrient cycling.

Empirical evidence that soil carbon formation from plant inputs is positively related to microbial growth

Science.gov (United States)

Mark A. Bradford; Ashley D. Keiser; Christian A. Davies; Calley A. Mersmann; Michael S. Strickland

2012-01-01

Plant-carbon inputs to soils in the form of dissolved sugars, organic acids and amino acids fuel much of heterotrophic microbial activity belowground. Initial residence times of these compounds in the soil solution are on the order of hours, with microbial uptake a primary removal mechanism. Through microbial biosynthesis, the dissolved compounds become dominant...

Removal of crude petroleum hydrocarbons by heterotrophic bacteria ...

African Journals Online (AJOL)

Nitrogenous fertilizer (NPK) plant effluents from NAFCON were used in amending plots of land experimentally polluted with crude oil. Counts of heterotrophic bacteria (THBC) and fungi (TF), and of petroleum utilizing bacteria (PUB) and fungi (PUF) were monitored during an 8 weeks period. Counts obtained showed that ...

Distribution of {sup 137}Cs in the Surface Soil of Serpong Nuclear Site

Energy Technology Data Exchange (ETDEWEB)

Lubis, E., E-mail: erlub@batan.go.id [Center for Radioactive Waste Technology, National Nuclear Energy Agency, Serpong (Indonesia)

2011-08-15

The distribution of {sup 137}Cs in the surface soil layer of Serpong Nuclear Site (SNS) was investigated by field sampling. The Objectives of the investigation is finding the profile of {sup 137}Cs distribution in the surface soil and the T{sub f} value that can be used for estimation of radiation dose from livestock product-man pathways. The results indicates that the {sup 137}Cs activity in surface soil of SNS is 0.80 {+-} 0.29 Bq/kg, much lower than in the Antarctic. The contribution value of {sup 137}Cs from the operation of G.A. Siwabessy Reactor until now is undetectable. The T{sub f} of {sup 137}Cs from surface soil to Panisetum Purpureum, Setaria Spha Celata and Imperata Cylindrica grasses were 0.71 {+-} 0.14, 0.84 {+-} 0.27 and 0.81 {+-} 0.11 respectively. The results show that value of the transfer factor of {sup 137}Cs varies between cultivated and uncultivated soil and also with the soils with thick humus. (author)

Fate of polycyclic aromatic hydrocarbons in plant-soil systems: Plant responses to a chemical stress in the root zone

Energy Technology Data Exchange (ETDEWEB)

Hoylman, Anne M. [Univ. of Tennessee, Knoxville, TN (United States)

1994-01-01

Under laboratory conditions selected to maximize root uptake, plant tissue distribution of PAH-derived ¹⁴C was largely limited to root tissue of Malilotus alba. These results suggest that plant uptake of PAHs from contaminated soil via roots, and translocation to aboveground plant tissues (stems and leaves), is a limited mechanism for transport into terrestrial food chains. However, these data also indicate that root surface sorption of PAHs may be important for plants grown in soils containing elevated concentration PAHs. Root surface sorption of PAHs may be an important route of exposure for plants in soils containing elevated concentrations of PAHS. Consequently, the root-soil interface may be the site of plant-microbial interactions in response to a chemical stress. In this study, evidence of a shift in carbon allocation to the root zone of plants exposed to phenanthrene and corresponding increases in soil respiration and heterotrophic plate counts provide evidence of a plant-microbial response to a chemical stress. The results of this study establish the importance of the root-soil interface for plants growing in PAH contaminated soil and indicate the existence of plant-microbial interactions in response to a chemical stress. These results may provide new avenues of inquiry for studies of plant toxicology, plant-microbial interactions in the rhizosphere, and environmental fates of soil contaminants. In addition, the utilization of plants to enhance the biodegradation of soil contaminants may require evaluation of plant physiological changes and plant shifts in resource allocation.

Spatio-temporal Root Zone Soil Moisture Estimation for Indo - Gangetic Basin from Satellite Derived (AMSR-2 and SMOS) Surface Soil Moisture

Science.gov (United States)

Sure, A.; Dikshit, O.

2017-12-01

Root zone soil moisture (RZSM) is an important element in hydrology and agriculture. The estimation of RZSM provides insight in selecting the appropriate crops for specific soil conditions (soil type, bulk density, etc.). RZSM governs various vadose zone phenomena and subsequently affects the groundwater processes. With various satellite sensors dedicated to estimating surface soil moisture at different spatial and temporal resolutions, estimation of soil moisture at root zone level for Indo - Gangetic basin which inherits complex heterogeneous environment, is quite challenging. This study aims at estimating RZSM and understand its variation at the level of Indo - Gangetic basin with changing land use/land cover, topography, crop cycles, soil properties, temperature and precipitation patterns using two satellite derived soil moisture datasets operating at distinct frequencies with different principles of acquisition. Two surface soil moisture datasets are derived from AMSR-2 (6.9 GHz - `C' Band) and SMOS (1.4 GHz - `L' band) passive microwave sensors with coarse spatial resolution. The Soil Water Index (SWI), accounting for soil moisture from the surface, is derived by considering a theoretical two-layered water balance model and contributes in ascertaining soil moisture at the vadose zone. This index is evaluated against the widely used modelled soil moisture dataset of GLDAS - NOAH, version 2.1. This research enhances the domain of utilising the modelled soil moisture dataset, wherever the ground dataset is unavailable. The coupling between the surface soil moisture and RZSM is analysed for two years (2015-16), by defining a parameter T, the characteristic time length. The study demonstrates that deriving an optimal value of T for estimating SWI at a certain location is a function of various factors such as land, meteorological, and agricultural characteristics.

Effects of Sludge-amendment on Mineralization of Pyrene and Microorganisms in Sludge and Soil

DEFF Research Database (Denmark)

Klinge, C; Gejlsbjerg, B; Ekelund, Flemming

2001-01-01

. Sludge-amendment enhanced the mineralization of pyrene in the soil compared to soil without sludge, and the most extensive mineralization was observed when the sludge was kept in a lump. The number of protozoa, heterotrophic bacteria and pyrene-mineralizing bacteria was much higher in the sludge compared...... to the soil. The amendment of sludge did not affect the number of protozoa and bacteria in the surrounding soil, which indicated that organic contaminants in the sludge had a little effect on the number of protozoa and bacteria in the surrounding soil...

A New Empirical Model for Radar Scattering from Bare Soil Surfaces

Directory of Open Access Journals (Sweden)

Nicolas Baghdadi

2016-11-01

Full Text Available The objective of this paper is to propose a new semi-empirical radar backscattering model for bare soil surfaces based on the Dubois model. A wide dataset of backscattering coefficients extracted from synthetic aperture radar (SAR images and in situ soil surface parameter measurements (moisture content and roughness is used. The retrieval of soil parameters from SAR images remains challenging because the available backscattering models have limited performances. Existing models, physical, semi-empirical, or empirical, do not allow for a reliable estimate of soil surface geophysical parameters for all surface conditions. The proposed model, developed in HH, HV, and VV polarizations, uses a formulation of radar signals based on physical principles that are validated in numerous studies. Never before has a backscattering model been built and validated on such an important dataset as the one proposed in this study. It contains a wide range of incidence angles (18°–57° and radar wavelengths (L, C, X, well distributed, geographically, for regions with different climate conditions (humid, semi-arid, and arid sites, and involving many SAR sensors. The results show that the new model shows a very good performance for different radar wavelengths (L, C, X, incidence angles, and polarizations (RMSE of about 2 dB. This model is easy to invert and could provide a way to improve the retrieval of soil parameters.

Adaptive Surface Modeling of Soil Properties in Complex Landforms

Directory of Open Access Journals (Sweden)

Wei Liu

2017-06-01

Full Text Available Abstract: Spatial discontinuity often causes poor accuracy when a single model is used for the surface modeling of soil properties in complex geomorphic areas. Here we present a method for adaptive surface modeling of combined secondary variables to improve prediction accuracy during the interpolation of soil properties (ASM-SP. Using various secondary variables and multiple base interpolation models, ASM-SP was used to interpolate soil K+ in a typical complex geomorphic area (Qinghai Lake Basin, China. Five methods, including inverse distance weighting (IDW, ordinary kriging (OK, and OK combined with different secondary variables (e.g., OK-Landuse, OK-Geology, and OK-Soil, were used to validate the proposed method. The mean error (ME, mean absolute error (MAE, root mean square error (RMSE, mean relative error (MRE, and accuracy (AC were used as evaluation indicators. Results showed that: (1 The OK interpolation result is spatially smooth and has a weak bull's-eye effect, and the IDW has a stronger ‘bull’s-eye’ effect, relatively. They both have obvious deficiencies in depicting spatial variability of soil K+. (2 The methods incorporating combinations of different secondary variables (e.g., ASM-SP, OK-Landuse, OK-Geology, and OK-Soil were associated with lower estimation bias. Compared with IDW, OK, OK-Landuse, OK-Geology, and OK-Soil, the accuracy of ASM-SP increased by 13.63%, 10.85%, 9.98%, 8.32%, and 7.66%, respectively. Furthermore, ASM-SP was more stable, with lower MEs, MAEs, RMSEs, and MREs. (3 ASM-SP presents more details than others in the abrupt boundary, which can render the result consistent with the true secondary variables. In conclusion, ASM-SP can not only consider the nonlinear relationship between secondary variables and soil properties, but can also adaptively combine the advantages of multiple models, which contributes to making the spatial interpolation of soil K+ more reasonable.

Uptake of gaseous formaldehyde onto soil surfaces: a coated-wall flow tube study

Science.gov (United States)

Li, Guo; Su, Hang; Li, Xin; Meusel, Hannah; Kuhn, Uwe; Pöschl, Ulrich; Shao, Min; Cheng, Yafang

2015-04-01

Gaseous formaldehyde (HCHO) is an important intermediate molecule and source of HO2 radicals. However, discrepancies exist between model simulated and observed HCHO concentrations, suggesting missing sources or sinks in the HCHO budget. Multiphase processes on the surface of soil and airborne soil-derived particles have been suggested as an important mechanism for the production/removal of atmospheric trace gases and aerosols. In this work, the uptake of gaseous HCHO on soil surfaces were investigated through coated-wall flow tube experiments with HCHO concentration ranging from 10 to 40 ppbv. The results show that the adsorption of HCHO occurred on soil surfaces, and the uptake coefficient dropped gradually (i.e., by a factor of 5 after 1 hour) as the reactive surface sites were consumed. The HCHO uptake coefficient was found to be affected by the relative humidity (RH), decreasing from (2.4 ± 0.5) × 10-4 at 0% RH to (3.0 ± 0.08) × 10-5 at 70% RH, due to competition of water molecule absorption on the soil surface. A release of HCHO from reacted soil was also detected by applying zero air, suggesting the nature of reversible physical absorption and the existence of an equilibrium at the soil-gas interface. It implies that soil could be either a source or a sink for HCHO, depending on the ambient HCHO concentration. We also develop a Matlab program to calculate the uptake coefficient under laminar flow conditions based on the Cooney-Kim-Davis method.

Pyruvic Oxime Nitrification and Copper and Nickel Resistance by a Cupriavidus pauculus, an Active Heterotrophic Nitrifier-Denitrifier

OpenAIRE

Ramirez, Miguel; Obrzydowski, Jennifer; Ayers, Mary; Virparia, Sonia; Wang, Meijing; Stefan, Kurtis; Linchangco, Richard; Castignetti, Domenic

2014-01-01

Heterotrophic nitrifiers synthesize nitrogenous gasses when nitrifying ammonium ion. A Cupriavidus pauculus, previously thought an Alcaligenes sp. and noted as an active heterotrophic nitrifier-denitrifier, was examined for its ability to produce nitrogen gas (N2) and nitrous oxide (N2O) while heterotrophically nitrifying the organic substrate pyruvic oxime [CH3–C(NOH)–COOH]. Neither N2 nor N2O were produced. Nucleotide and phylogenetic analyses indicated that the organism is a member of a g...

Updated global soil map for the Weather Research and Forecasting model and soil moisture initialization for the Noah land surface model

Science.gov (United States)

DY, C. Y.; Fung, J. C. H.

2016-08-01

A meteorological model requires accurate initial conditions and boundary conditions to obtain realistic numerical weather predictions. The land surface controls the surface heat and moisture exchanges, which can be determined by the physical properties of the soil and soil state variables, subsequently exerting an effect on the boundary layer meteorology. The initial and boundary conditions of soil moisture are currently obtained via National Centers for Environmental Prediction FNL (Final) Operational Global Analysis data, which are collected operationally in 1° by 1° resolutions every 6 h. Another input to the model is the soil map generated by the Food and Agriculture Organization of the United Nations - United Nations Educational, Scientific and Cultural Organization (FAO-UNESCO) soil database, which combines several soil surveys from around the world. Both soil moisture from the FNL analysis data and the default soil map lack accuracy and feature coarse resolutions, particularly for certain areas of China. In this study, we update the global soil map with data from Beijing Normal University in 1 km by 1 km grids and propose an alternative method of soil moisture initialization. Simulations of the Weather Research and Forecasting model show that spinning-up the soil moisture improves near-surface temperature and relative humidity prediction using different types of soil moisture initialization. Explanations of that improvement and improvement of the planetary boundary layer height in performing process analysis are provided.

Reconstruction of food webs in biological soil crusts using metabolomics.

Science.gov (United States)

Baran, Richard; Brodie, Eoin L.; Mayberry-Lewis, Jazmine; Nunes Da Rocha, Ulisses; Bowen, Benjamin P.; Karaoz, Ulas; Cadillo-Quiroz, Hinsby; Garcia-Pichel, Ferran; Northen, Trent R.

2015-04-01

Biological soil crusts (BSCs) are communities of organisms inhabiting the upper layer of soil in arid environments. BSCs persist in a dessicated dormant state for extended periods of time and experience pulsed periods of activity facilitated by infrequent rainfall. Microcoleus vaginatus, a non-diazotrophic filamentous cyanobacterium, is the key primary producer in BSCs in the Colorado Plateau and is an early pioneer in colonizing arid environments. Over decades, BSCs proceed through developmental stages with increasing complexity of constituent microorganisms and macroscopic properties. Metabolic interactions among BSC microorganisms probably play a key role in determining the community dynamics and cycling of carbon and nitrogen. However, these metabolic interactions have not been studied systematically. Towards this goal, exometabolomic analysis was performed using liquid chromatography coupled to tandem mass spectrometry on biological soil crust pore water and spent media of key soil bacterial isolates. Comparison of spent vs. fresh media was used to determine uptake or release of metabolites by specific microbes. To link pore water experiments with isolate studies, metabolite extracts of authentic soil were used as supplements for isolate exometabolomic profiling. Our soil metabolomics methods detected hundreds of metabolites from soils including many novel compounds. Overall, Microcoleus vaginatus was found to release and utilize a broad range of metabolites. Many of these metabolites were also taken up by heterotrophs but there were surprisingly few metabolites uptaken by all isolates. This points to a competition for a small set of central metabolites and specialization of individual heterotrophs towards a diverse pool of available organic nutrients. Overall, these data suggest that understanding the substrate specialization of biological soil crust bacteria can help link community structure to nutrient cycling.

Organic matter composition of soil macropore surfaces under different agricultural management practices

Science.gov (United States)

Glæsner, Nadia; Leue, Marin; Magid, Jacob; Gerke, Horst H.

2016-04-01

Understanding the heterogeneous nature of soil, i.e. properties and processes occurring specifically at local scales is essential for best managing our soil resources for agricultural production. Examination of intact soil structures in order to obtain an increased understanding of how soil systems operate from small to large scale represents a large gap within soil science research. Dissolved chemicals, nutrients and particles are transported through the disturbed plow layer of agricultural soil, where after flow through the lower soil layers occur by preferential flow via macropores. Rapid movement of water through macropores limit the contact between the preferentially moving water and the surrounding soil matrix, therefore contact and exchange of solutes in the water is largely restricted to the surface area of the macropores. Organomineral complex coated surfaces control sorption and exchange properties of solutes, as well as availability of essential nutrients to plant roots and to the preferentially flowing water. DRIFT (Diffuse Reflectance infrared Fourier Transform) Mapping has been developed to examine composition of organic matter coated macropores. In this study macropore surfaces structures will be determined for organic matter composition using DRIFT from a long-term field experiment on waste application to agricultural soil (CRUCIAL, close to Copenhagen, Denmark). Parcels with 5 treatments; accelerated household waste, accelerated sewage sludge, accelerated cattle manure, NPK and unfertilized, will be examined in order to study whether agricultural management have an impact on the organic matter composition of intact structures.

Changes in the microbial community during bioremediation of gasoline-contaminated soil

Directory of Open Access Journals (Sweden)

Aline Jaime Leal

Full Text Available Abstract We aimed to verify the changes in the microbial community during bioremediation of gasoline-contaminated soil. Microbial inoculants were produced from successive additions of gasoline to municipal solid waste compost (MSWC previously fertilized with nitrogen-phosphorous. To obtain Inoculant A, fertilized MSWC was amended with gasoline every 3 days during 18 days. Inoculant B received the same application, but at every 6 days. Inoculant C included MSWC fertilized with N–P, but no gasoline. The inoculants were applied to gasoline-contaminated soil at 10, 30, or 50 g/kg. Mineralization of gasoline hydrocarbons in soil was evaluated by respirometric analysis. The viability of the inoculants was evaluated after 103 days of storage under refrigeration or room temperature. The relative proportions of microbial groups in the inoculants and soil were evaluated by FAME. The dose of 50 g/kg of inoculants A and B led to the largest CO2 emission from soil. CO2 emissions in treatments with inoculant C were inversely proportional to the dose of inoculant. Heterotrophic bacterial counts were greater in soil treated with inoculants A and B. The application of inoculants decreased the proportion of actinobacteria and increased of Gram-negative bacteria. Decline in the density of heterotrophic bacteria in inoculants occurred after storage. This reduction was bigger in inoculants stored at room temperature. The application of stored inoculants in gasoline-contaminated soil resulted in a CO2 emission twice bigger than that observed in uninoculated soil. We concluded that MSWC is an effective material for the production of microbial inoculants for the bioremediation of gasoline-contaminated soil.

Changes in the microbial community during bioremediation of gasoline-contaminated soil.

Science.gov (United States)

Leal, Aline Jaime; Rodrigues, Edmo Montes; Leal, Patrícia Lopes; Júlio, Aline Daniela Lopes; Fernandes, Rita de Cássia Rocha; Borges, Arnaldo Chaer; Tótola, Marcos Rogério

We aimed to verify the changes in the microbial community during bioremediation of gasoline-contaminated soil. Microbial inoculants were produced from successive additions of gasoline to municipal solid waste compost (MSWC) previously fertilized with nitrogen-phosphorous. To obtain Inoculant A, fertilized MSWC was amended with gasoline every 3 days during 18 days. Inoculant B received the same application, but at every 6 days. Inoculant C included MSWC fertilized with N-P, but no gasoline. The inoculants were applied to gasoline-contaminated soil at 10, 30, or 50g/kg. Mineralization of gasoline hydrocarbons in soil was evaluated by respirometric analysis. The viability of the inoculants was evaluated after 103 days of storage under refrigeration or room temperature. The relative proportions of microbial groups in the inoculants and soil were evaluated by FAME. The dose of 50g/kg of inoculants A and B led to the largest CO 2 emission from soil. CO 2 emissions in treatments with inoculant C were inversely proportional to the dose of inoculant. Heterotrophic bacterial counts were greater in soil treated with inoculants A and B. The application of inoculants decreased the proportion of actinobacteria and increased of Gram-negative bacteria. Decline in the density of heterotrophic bacteria in inoculants occurred after storage. This reduction was bigger in inoculants stored at room temperature. The application of stored inoculants in gasoline-contaminated soil resulted in a CO 2 emission twice bigger than that observed in uninoculated soil. We concluded that MSWC is an effective material for the production of microbial inoculants for the bioremediation of gasoline-contaminated soil. Copyright © 2016 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. All rights reserved.

Stabilizing lead bullets in shooting range soil by phosphate-based surface coating

Directory of Open Access Journals (Sweden)

Bin Hua

2016-08-01

Full Text Available Soil lead (Pb is well known as a threat to human health and ecosystem. Although relatively insoluble, lead bullets in shooting range soil can be readily released into soluble forms through natural weathering processes and thus pose significant human and environmental risks. In this study, laboratory experiments were conducted to investigate if the Pb bullets in shooting range soil can be stabilized through surface coating of phosphate-based materials. Results indicated that FePO4 or AlPO4 coatings, insoluble metal phosphates, have been successfully formed on the surface of the Pb bullets. The EPA Toxicity Characteristic Leaching Procedure (TCLP test showed that FePO4 or AlPO4 surface coating would effectively reduce the Pb solubility or leachability of the bullets. The surface coating under pH of <5.5 for 7 days could achieve 92–100% reduction, with 85–98% by FePO4 coating and 77–98% by AlPO4 coating as compared with the non-coating. Leachable Pb concentration in the contaminated shooting range soil was reduced by 85–98% or 77–98% as a result of the FePO4 or AlPO4 solution treatment. This study demonstrated that the FePO4 or AlPO4–based surface coating on lead bullets can effectively inhibit the Pb weathering and significantly reduce the Pb release from soil through in situ chemical stabilization, which could be potentially applicable as a cost-effective and environmental-sound technology for the remediation of Pb-contaminated shooting range soil.

Lack of P-limitation of phytoplankton and heterotrophic prokaryotes in surface waters of three anticyclonic eddies in the stratified Mediterranean Sea

Science.gov (United States)

Tanaka, T.; Thingstad, T. F.; Christaki, U.; Colombet, J.; Cornet-Barthaux, V.; Courties, C.; Grattepanche, J.-D.; Lagaria, A.; Nedoma, J.; Oriol, L.; Psarra, S.; Pujo-Pay, M.; van Wambeke, F.

2011-02-01

We investigated the identity of the limiting nutrient of the pelagic microbial food web in the Mediterranean Sea using nutrient manipulated microcosms during summer 2008. Experiments were carried out with surface waters at the center of anticyclonic eddies in the Western Basin, the Ionian Basin, and the Levantine Basin. In situ, the ratio of N to P was always higher in both dissolved and particulate organic fractions compared to the Redfield ratio, suggesting a relative P-starvation. In each experiment, four different treatments in triplicates (addition of ammonium, phosphate, a combination of both, and the unamended control) were employed and chemical and biological parameters monitored throughout a 3-4 day incubation. Temporal changes of turnover time of phosphate and ATP, and alkaline phosphatase activity during the incubation suggested that the phytoplankton and heterotrophic prokaryotes (Hprok) communities were not P-limited at the sites. Furthermore, statistical comparison among treatments at the end of the incubation did not support a hypothesis of P-limitation at the three study sites. In contrast, primary production was consistently limited by N, and Hprok growth was not limited by N nor P in the Western Basin, but N-limited in the Ionian Basin, and N and P co-limited in the Levantine Basin. Our results demonstrated the gap between biogeochemical features (an apparent P-starved status) and biological responses (no apparent P-limitation). We question the general notion that Mediterranean surface waters are limited by P alone during the stratified period.

Landscape heterogeneity, soil climate, and carbon exchange in a boreal black spruce forest.

Science.gov (United States)

Dunn, Allison L; Wofsy, Steven C; v H Bright, Alfram

2009-03-01

We measured soil climate and the turbulent fluxes of CO2, H2O, heat, and momentum on short towers (2 m) in a 160-yr-old boreal black spruce forest in Manitoba, Canada. Two distinct land cover types were studied: a Sphagnum-dominated wetland, and a feathermoss (Pleurozium and Hylocomium)-dominated upland, both lying within the footprint of a 30-m tower, which has measured whole-forest carbon exchange since 1994. Peak summertime uptake of CO2, was higher in the wetland than for the forest as a whole due to the influence of deciduous shrubs. Soil respiration rates in the wetland were approximately three times larger than in upland soils, and 30% greater than the mean of the whole forest, reflecting decomposition of soil organic matter. Soil respiration rates in the wetland were regulated by soil temperature, which was in turn influenced by water table depth through effects on soil heat capacity and conductivity. Warmer soil temperatures and deeper water tables favored increased heterotrophic respiration. Wetland drainage was limited by frost during the first half of the growing season, leading to high, perched water tables, cool soil temperatures, and much lower respiration rates than observed later in the growing season. Whole-forest evapotranspiration increased as water tables dropped, suggesting that photosynthesis in this forest was rarely subject to water stress. Our data indicate positive feedback between soil temperature, seasonal thawing, heterotrophic respiration, and evapotranspiration. As a result, climate warming could cause covariant changes in soil temperature and water table depths that may stimulate photosynthesis and strongly promote efflux of CO2 from peat soils in boreal wetlands.

Carbon Dioxide in Arable Soil Profiles

DEFF Research Database (Denmark)

Chirinda, Ngoni; Plauborg, Finn; Heckrath, Goswin Johann

2014-01-01

on the comparability of results obtained using different methods is limited. We therefore aimed to compare the dynamics in soil CO2 concentrations obtained from an automated system (GMP343 sensors) to those from a manually operated measurement system (i.e., soil gas sampled using stainless steel needles and rods......Carbon dioxide (CO2) concentrations in arable soil profiles are influenced by autotrophic and heterotrophic respiration as well as soil physical properties that regulate gas transport. Whereas different methods have been used to assess dynamics of soil CO2 concentrations, our understanding...... systems. Within the measurement range for the GMP343 sensors (0-20,000 ppm), mean results from the two systems were similar within the plough layer at the upslope (P = 0.060) and footslope (P = 0.139) position, and also below the plough layer at the upslope position (P = 0.795). However, results from...

Analysis of surface soil moisture patterns in agricultural landscapes using Empirical Orthogonal Functions

Directory of Open Access Journals (Sweden)

W. Korres

2010-05-01

Full Text Available Soil moisture is one of the fundamental variables in hydrology, meteorology and agriculture. Nevertheless, its spatio-temporal patterns in agriculturally used landscapes that are affected by multiple natural (rainfall, soil, topography etc. and agronomic (fertilisation, soil management etc. factors are often not well known. The aim of this study is to determine the dominant factors governing the spatio-temporal patterns of surface soil moisture in a grassland and an arable test site that are located within the Rur catchment in Western Germany. Surface soil moisture (0–6 cm was measured in an approx. 50×50 m grid during 14 and 17 measurement campaigns (May 2007 to November 2008 in both test sites. To analyse the spatio-temporal patterns of surface soil moisture, an Empirical Orthogonal Function (EOF analysis was applied and the results were correlated with parameters derived from topography, soil, vegetation and land management to link the patterns to related factors and processes. For the grassland test site, the analysis resulted in one significant spatial structure (first EOF, which explained 57.5% of the spatial variability connected to soil properties and topography. The statistical weight of the first spatial EOF is stronger on wet days. The highest temporal variability can be found in locations with a high percentage of soil organic carbon (SOC. For the arable test site, the analysis resulted in two significant spatial structures, the first EOF, which explained 38.4% of the spatial variability, and showed a highly significant correlation to soil properties, namely soil texture and soil stone content. The second EOF, which explained 28.3% of the spatial variability, is linked to differences in land management. The soil moisture in the arable test site varied more strongly during dry and wet periods at locations with low porosity. The method applied is capable of identifying the dominant parameters controlling spatio-temporal patterns of

Effects of surface soil loss in South Eastern Nigeria: I. crop ...

African Journals Online (AJOL)

The widespread incidence of soil erosion in the tropics has been identified, though few studies have dealt with specific problems of decline in crop productivity associated with soil loss. An understanding of the influence of surface soil loss on crop yield is necessary in order to find out their effects on performance of crops.

Bacterial diversity in a tropical crude oil-polluted soil undergoing ...

African Journals Online (AJOL)

The bacterial diversity in a tropical soil experimentally polluted with crude oil during a 57 days bioremediation was investigated in five 1 m2 plots using total culturable hydrocarbon utilizing bacteria, heterotrophic bacteria and gas chromatographic analyses. Four out of the five experimental plots received each 4 L of Bonny ...

Responses of heterotrophic bacteria abundance and activity to Asian dust enrichment in the low nutrients and low chlorophyll (LNLC) region of the Northwestern Pacific Ocean

Science.gov (United States)

Shi, Dongwan; Li, Kuiran; Tian, Yanzhao; Zhang, Xiaohao; Bai, Jie

2017-05-01

Bacteria, as an essential part of microbial food web, play a significant role in the marine ecosystem. Dust deposits into the surface ocean carrying with vital nutrient such as Inorganic nitrogen and phosphorus etc., which has an important influence on the life activities of heterotrophic bacteria. The microcosm experiments with Asian dust deposition was carried out on board in the station K3 (26.18°N, 136.73°E) in April 2015, aiming to estimate the impact of dust deposition on the oligotrophic Northwestern pacific Sea, the main goal of the present paper was to assess how dust deposition events affect the abundance and activity of heterotrophic bacteria in low nutrient and low chlorophyll (LNLC) sea area. Station K3 located in the central northwestern Pacific Ocean, which has the characteristic of low nutrient and low chlorophyll. The study shows that there was an N-P co-limitation in station K3, and the deposition of Asian dust can increase the abundance, and promote the activity of heterotrophic bacteria in the station K3.

Upscaling of Surface Soil Moisture Using a Deep Learning Model with VIIRS RDR

Directory of Open Access Journals (Sweden)

Dongying Zhang

2017-04-01

Full Text Available In current upscaling of in situ surface soil moisture practices, commonly used novel statistical or machine learning-based regression models combined with remote sensing data show some advantages in accurately capturing the satellite footprint scale of specific local or regional surface soil moisture. However, the performance of most models is largely determined by the size of the training data and the limited generalization ability to accomplish correlation extraction in regression models, which are unsuitable for larger scale practices. In this paper, a deep learning model was proposed to estimate soil moisture on a national scale. The deep learning model has the advantage of representing nonlinearities and modeling complex relationships from large-scale data. To illustrate the deep learning model for soil moisture estimation, the croplands of China were selected as the study area, and four years of Visible Infrared Imaging Radiometer Suite (VIIRS raw data records (RDR were used as input parameters, then the models were trained and soil moisture estimates were obtained. Results demonstrate that the estimated models captured the complex relationship between the remote sensing variables and in situ surface soil moisture with an adjusted coefficient of determination of R ¯ 2 = 0.9875 and a root mean square error (RMSE of 0.0084 in China. These results were more accurate than the Soil Moisture Active Passive (SMAP active radar soil moisture products and the Global Land data assimilation system (GLDAS 0–10 cm depth soil moisture data. Our study suggests that deep learning model have potential for operational applications of upscaling in situ surface soil moisture data at the national scale.

Dissipation of triclosan, triclocarban, carbamazepine and naproxen in agricultural soil following surface or sub-surface application of dewatered municipal biosolids

Energy Technology Data Exchange (ETDEWEB)

Al-Rajab, Abdul Jabbar; Sabourin, Lyne [Agriculture and Agri-Food Canada, London, ON N5V 4T3 (Canada); Lapen, David R. [Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6 (Canada); Topp, Edward, E-mail: ed.topp@agr.gc.ca [Agriculture and Agri-Food Canada, London, ON N5V 4T3 (Canada); Department of Biology, Western University, London, ON N6A 5B7 (Canada)

2015-04-15

In many jurisdictions land application of municipal biosolids is a valued source of nutrients for crop production. The practice must be managed to ensure that crops and adjacent water are not subject to contamination by pharmaceuticals or other organic contaminants. The broad spectrum antimicrobial agents triclosan (TCS) and triclocarban (TCC), the anti-epileptic drug carbamazepine (CBZ), and the nonsteroidal anti-inflammatory drug naproxen (NAP) are widely used and are carried in biosolids. In the present study, the effect of biosolids and depth of placement in the soil profile on the rates of TCS, TCC, CBZ, and NAP dissipation were evaluated under semi-field conditions. Aggregates of dewatered municipal biosolids (DMBs) supplemented with {sup 14}C-labeled residues were applied either on the soil surface or in the subsurface of the soil profile, and incubated over several months under ambient outdoor conditions. The dissipation of TCS, TCC and NAP was significantly faster in sub-surface than surface applied biosolid aggregates. In contrast the dissipation rate for CBZ was the same in surface applied and incorporated aggregates. Overall, the present study has determined a significant effect of depth of placement on the dissipation rate of biodegradable molecules. - Highlights: • We characterized the soil fate of four organic contaminants carried in biosolids. • Biosolids were placed on the soil surface or incorporated within the soil profile. • Naproxen, triclosan and triclocarban were dissipated more rapidly when incorporated. • Depth of placement did not influence the rate of carbamazepine dissipation. • Soil incorporation of biosolids will result in more rapid dissipation of contaminants.

Dissipation of triclosan, triclocarban, carbamazepine and naproxen in agricultural soil following surface or sub-surface application of dewatered municipal biosolids

International Nuclear Information System (INIS)

Al-Rajab, Abdul Jabbar; Sabourin, Lyne; Lapen, David R.; Topp, Edward

2015-01-01

In many jurisdictions land application of municipal biosolids is a valued source of nutrients for crop production. The practice must be managed to ensure that crops and adjacent water are not subject to contamination by pharmaceuticals or other organic contaminants. The broad spectrum antimicrobial agents triclosan (TCS) and triclocarban (TCC), the anti-epileptic drug carbamazepine (CBZ), and the nonsteroidal anti-inflammatory drug naproxen (NAP) are widely used and are carried in biosolids. In the present study, the effect of biosolids and depth of placement in the soil profile on the rates of TCS, TCC, CBZ, and NAP dissipation were evaluated under semi-field conditions. Aggregates of dewatered municipal biosolids (DMBs) supplemented with 14 C-labeled residues were applied either on the soil surface or in the subsurface of the soil profile, and incubated over several months under ambient outdoor conditions. The dissipation of TCS, TCC and NAP was significantly faster in sub-surface than surface applied biosolid aggregates. In contrast the dissipation rate for CBZ was the same in surface applied and incorporated aggregates. Overall, the present study has determined a significant effect of depth of placement on the dissipation rate of biodegradable molecules. - Highlights: • We characterized the soil fate of four organic contaminants carried in biosolids. • Biosolids were placed on the soil surface or incorporated within the soil profile. • Naproxen, triclosan and triclocarban were dissipated more rapidly when incorporated. • Depth of placement did not influence the rate of carbamazepine dissipation. • Soil incorporation of biosolids will result in more rapid dissipation of contaminants

Soil surface temperatures reveal moderation of the urban heat island effect by trees and shrubs.

Science.gov (United States)

Edmondson, J L; Stott, I; Davies, Z G; Gaston, K J; Leake, J R

2016-09-19

Urban areas are major contributors to air pollution and climate change, causing impacts on human health that are amplified by the microclimatological effects of buildings and grey infrastructure through the urban heat island (UHI) effect. Urban greenspaces may be important in reducing surface temperature extremes, but their effects have not been investigated at a city-wide scale. Across a mid-sized UK city we buried temperature loggers at the surface of greenspace soils at 100 sites, stratified by proximity to city centre, vegetation cover and land-use. Mean daily soil surface temperature over 11 months increased by 0.6 °C over the 5 km from the city outskirts to the centre. Trees and shrubs in non-domestic greenspace reduced mean maximum daily soil surface temperatures in the summer by 5.7 °C compared to herbaceous vegetation, but tended to maintain slightly higher temperatures in winter. Trees in domestic gardens, which tend to be smaller, were less effective at reducing summer soil surface temperatures. Our findings reveal that the UHI effects soil temperatures at a city-wide scale, and that in their moderating urban soil surface temperature extremes, trees and shrubs may help to reduce the adverse impacts of urbanization on microclimate, soil processes and human health.

Sea level and turbidity controls on mangrove soil surface elevation change

Science.gov (United States)

Lovelock, Catherine E.; Fernanda Adame, Maria; Bennion, Vicki; Hayes, Matthew; Reef, Ruth; Santini, Nadia; Cahoon, Donald R.

2015-01-01

Increases in sea level are a threat to seaward fringing mangrove forests if levels of inundation exceed the physiological tolerance of the trees; however, tidal wetlands can keep pace with sea level rise if soil surface elevations can increase at the same pace as sea level rise. Sediment accretion on the soil surface and belowground production of roots are proposed to increase with increasing sea level, enabling intertidal habitats to maintain their position relative to mean sea level, but there are few tests of these predictions in mangrove forests. Here we used variation in sea level and the availability of sediments caused by seasonal and inter-annual variation in the intensity of La Nina-El Nino to assess the effects of increasing sea level on surface elevation gains and contributing processes (accretion on the surface, subsidence and root growth) in mangrove forests. We found that soil surface elevation increased with mean sea level (which varied over 250 mm during the study) and with turbidity at sites where fine sediment in the water column is abundant. In contrast, where sediments were sandy, rates of surface elevation gain were high, but not significantly related to variation in turbidity, and were likely to be influenced by other factors that deliver sand to the mangrove forest. Root growth was not linked to soil surface elevation gains, although it was associated with reduced shallow subsidence, and therefore may contribute to the capacity of mangroves to keep pace with sea level rise. Our results indicate both surface (sedimentation) and subsurface (root growth) processes can influence mangrove capacity to keep pace with sea level rise within the same geographic location, and that current models of tidal marsh responses to sea level rise capture the major feature of the response of mangroves where fine, but not coarse, sediments are abundant.

Temperature regulation of marine heterotrophic prokaryotes increases latitudinally as a breach between bottom-up and top-down controls

KAUST Repository

Moran, Xose Anxelu G.; Gasol, Josep M.; Pernice, Massimo C.; Mangot, Jean-Franç ois; Massana, Ramon; Lara, Elena; Vaqué , Dolors; Duarte, Carlos M.

2017-01-01

Planktonic heterotrophic prokaryotes make up the largest living biomass and process most organic matter in the ocean. Determining when and where the biomass and activity of heterotrophic prokaryotes are controlled by resource availability (bottom

The Role of Microbial Community Composition in Controlling Soil Respiration Responses to Temperature.

Science.gov (United States)

Auffret, Marc D; Karhu, Kristiina; Khachane, Amit; Dungait, Jennifer A J; Fraser, Fiona; Hopkins, David W; Wookey, Philip A; Singh, Brajesh K; Freitag, Thomas E; Hartley, Iain P; Prosser, James I

2016-01-01

Rising global temperatures may increase the rates of soil organic matter decomposition by heterotrophic microorganisms, potentially accelerating climate change further by releasing additional carbon dioxide (CO2) to the atmosphere. However, the possibility that microbial community responses to prolonged warming may modify the temperature sensitivity of soil respiration creates large uncertainty in the strength of this positive feedback. Both compensatory responses (decreasing temperature sensitivity of soil respiration in the long-term) and enhancing responses (increasing temperature sensitivity) have been reported, but the mechanisms underlying these responses are poorly understood. In this study, microbial biomass, community structure and the activities of dehydrogenase and β-glucosidase enzymes were determined for 18 soils that had previously demonstrated either no response or varying magnitude of enhancing or compensatory responses of temperature sensitivity of heterotrophic microbial respiration to prolonged cooling. The soil cooling approach, in contrast to warming experiments, discriminates between microbial community responses and the consequences of substrate depletion, by minimising changes in substrate availability. The initial microbial community composition, determined by molecular analysis of soils showing contrasting respiration responses to cooling, provided evidence that the magnitude of enhancing responses was partly related to microbial community composition. There was also evidence that higher relative abundance of saprophytic Basidiomycota may explain the compensatory response observed in one soil, but neither microbial biomass nor enzymatic capacity were significantly affected by cooling. Our findings emphasise the key importance of soil microbial community responses for feedbacks to global change, but also highlight important areas where our understanding remains limited.

Soil surface protection by Biocrusts: effects of functional groups on textural properties

Science.gov (United States)

Concostrina-Zubiri, Laura; Huber-Sannwald, Elisabeth; Martínez, Isabel; Flores Flores, José Luis; Escudero, Adrián

2015-04-01

In drylands, where vegetation cover is commonly scarce, soil surface is prone to wind and water soil erosion, with the subsequent loss of topsoil structure and chemical properties. These processes are even more pronounced in ecosystems subjected to extra erosive forces, such as grasslands and rangelands that support livestock production. However, some of the physiological and functional traits of biocrusts (i.e., complex association of cyanobacteria, lichens, mosses, fungi and soil particles) make them ideal to resist in disturbed environments and at the same time to protect soil surface from mechanical perturbations. In particular, the filaments and exudates of soil cyanobacteria and the rhizines of lichen can bind together soil particles, forming soil aggregates at the soil surface and thus enhancing soil stability. Also, they act as "biological covers" that preserve the most vulnerable soil layer from wind and runoff erosion and raindrop impact, maintaining soil structure and composition. In this work, we evaluated soil textural properties and organic matter content under different functional groups of biocrusts (i.e., cyanobacteria crust, 3 lichen species, 1 moss species) and in bare soil. In order to assess the impact of livestock trampling on soil properties and on Biocrust function, we sampled three sites conforming a disturbance gradient (low, medium and high impact sites) and a long-term livestock exclusion as control site. We found that the presence of biocrusts had little effects on soil textural properties and organic matter content in the control site, while noticeable differences were found between bare soil and soil under biocrusts (e.g., up to 16-37% higher clay content, compared to bare soil and up to 10% higher organic matter content). In addition, we found that depending on morphological traits and grazing regime, the effects of biocrusts changed along the gradient. For example, soil under the lichen Diploschistes diacapsis, with thick thallus

Effects of meteorological models on the solution of the surface energy balance and soil temperature variations in bare soils

Science.gov (United States)

Saito, Hirotaka; Šimůnek, Jiri

2009-07-01

SummaryA complete evaluation of the soil thermal regime can be obtained by evaluating the movement of liquid water, water vapor, and thermal energy in the subsurface. Such an evaluation requires the simultaneous solution of the system of equations for the surface water and energy balance, and subsurface heat transport and water flow. When only daily climatic data is available, one needs not only to estimate diurnal cycles of climatic data, but to calculate the continuous values of various components in the energy balance equation, using different parameterization methods. The objective of this study is to quantify the impact of the choice of different estimation and parameterization methods, referred together to as meteorological models in this paper, on soil temperature predictions in bare soils. A variety of widely accepted meteorological models were tested on the dataset collected at a proposed low-level radioactive-waste disposal site in the Chihuahua Desert in West Texas. As the soil surface was kept bare during the study, no vegetation effects were evaluated. A coupled liquid water, water vapor, and heat transport model, implemented in the HYDRUS-1D program, was used to simulate diurnal and seasonal soil temperature changes in the engineered cover installed at the site. The modified version of HYDRUS provides a flexible means for using various types of information and different models to evaluate surface mass and energy balance. Different meteorological models were compared in terms of their prediction errors for soil temperatures at seven observation depths. The results obtained indicate that although many available meteorological models can be used to solve the energy balance equation at the soil-atmosphere interface in coupled water, vapor, and heat transport models, their impact on overall simulation results varies. For example, using daily average climatic data led to greater prediction errors, while relatively simple meteorological models may

Sources of CO{sub 2} efflux from soil and review of partitioning methods

Energy Technology Data Exchange (ETDEWEB)

Kuzyakov, Y. [University of Hohenheim, Stuttgart (Germany). Institute of Soil Science and Land Evaluation

2006-03-15

Five main biogenic sources of CO{sub 2} efflux from soils have been distinguished and described according to their turnover rates and the mean residence time of carbon. They are root respiration, rhizomicrobial respiration, decomposition of plant residues, the priming effect induced by root exudation or by addition of plant residues, and basal respiration by microbial decomposition of soil organic matter (SOM). These sources can be grouped in several combinations to summarize CO{sub 2} efflux from the soil including: root-derived CO{sub 2}, plant-derived CO{sub 2}, SOM-derived CO{sub 2}, rhizosphere respiration, heterotrophic microbial respiration (respiration by heterotrophs), and respiration by autotrophs. These distinctions are important because without separation of SOM-derived CO{sub 2} from plant-derived CO{sub 2}, measurements of total soil respiration have very limited value for evaluation of the soil as a source or sink of atmospheric CO{sub 2} and for interpreting the sources of CO{sub 2} and the fate of carbon within soils and ecosystems. Additionally, the processes linked to the five sources of CO{sub 2} efflux from soil have various responses to environmental variables and consequently to global warming. This review describes the basic principles and assumptions of the following methods which allow SOM-derived and root-derived CO{sub 2} efflux to be separated under laboratory and field conditions: root exclusion techniques, shading and clipping, tree girdling, regression, component integration, excised roots and in situ root respiration; continuous and pulse labeling, {sup 13}C natural abundance and FACE, and radiocarbon dating and bomb-{sup 14}C. A short sections cover the separation of the respiration of autotrophs and that of heterotrophs, i.e. the separation of actual root respiration from microbial respiration, as well as methods allowing the amount of CO{sub 2} evolved by decomposition of plant residues and by priming effects to be estimated. All

Soil heat flux and day time surface energy balance closure at ...

Indian Academy of Sciences (India)

Soil heat flux is an important input component of surface energy balance. Estimates of soil heat flux were ... mate source of energy for all physical and bio- logical processes ... May) account for major thunderstorm activity in the state and winter ...

Impervious Surfaces Alter Soil Bacterial Communities in Urban Areas: A Case Study in Beijing, China

Directory of Open Access Journals (Sweden)

Yinhong Hu

2018-02-01

Full Text Available The rapid expansion of urbanization has caused land cover change, especially the increasing area of impervious surfaces. Such alterations have significant effects on the soil ecosystem by impeding the exchange of gasses, water, and materials between soil and the atmosphere. It is unclear whether impervious surfaces have any effects on soil bacterial diversity and community composition. In the present study, we conducted an investigation of bacterial communities across five typical land cover types, including impervious surfaces (concrete, permeable pavement (bricks with round holes, shrub coverage (Buxus megistophylla Levl., lawns (Festuca elata Keng ex E. Alexeev, and roadside trees (Sophora japonica Linn. in Beijing, to explore the response of bacteria to impervious surfaces. The soil bacterial communities were addressed by high-throughput sequencing of the bacterial 16S rRNA gene. We found that Proteobacteria, Actinobacteria, Acidobacteria, Bacteroidetes, Chloroflexi, and Firmicutes were the predominant phyla in urban soils. Soil from impervious surfaces presented a lower bacterial diversity, and differed greatly from other types of land cover. Soil bacterial diversity was predominantly affected by Zn, dissolved organic carbon (DOC, and soil moisture content (SMC. The composition of the bacterial community was similar under shrub coverage, roadside trees, and lawns, but different from beneath impervious surfaces and permeable pavement. Variance partitioning analysis showed that edaphic properties contributed to 12% of the bacterial community variation, heavy metal pollution explained 3.6% of the variation, and interaction between the two explained 33% of the variance. Together, our data indicate that impervious surfaces induced changes in bacterial community composition and decrease of bacterial diversity. Interactions between edaphic properties and heavy metals were here found to change the composition of the bacterial community and

Monitoring Multidecadal satellite earth observation of soil moisture products through land surface reanalysis

NARCIS (Netherlands)

Albergel, C.; Dorigo, W.; Balsamo, G.; Sabatar, J; de Rosnay, P.; Isaksen, I; Brocca, L; de Jeu, R.A.M.; Wagner, W.

2013-01-01

Soil moisture from ERA-Land, a revised version of the land surface components of the European Centre for Medium-Range Weather Forecasts Interim reanalysis (ERA-Interim), is used to monitor at a global scale the consistency of a new microwave based multi-satellite surface soil moisture date set

Pyruvic oxime nitrification and copper and nickel resistance by a Cupriavidus pauculus, an active heterotrophic nitrifier-denitrifier.

Science.gov (United States)

Ramirez, Miguel; Obrzydowski, Jennifer; Ayers, Mary; Virparia, Sonia; Wang, Meijing; Stefan, Kurtis; Linchangco, Richard; Castignetti, Domenic

2014-01-01

Heterotrophic nitrifiers synthesize nitrogenous gasses when nitrifying ammonium ion. A Cupriavidus pauculus, previously thought an Alcaligenes sp. and noted as an active heterotrophic nitrifier-denitrifier, was examined for its ability to produce nitrogen gas (N2) and nitrous oxide (N2O) while heterotrophically nitrifying the organic substrate pyruvic oxime [CH3-C(NOH)-COOH]. Neither N2 nor N2O were produced. Nucleotide and phylogenetic analyses indicated that the organism is a member of a genus (Cupriavidus) known for its resistance to metals and its metabolism of xenobiotics. The microbe (a Cupriavidus pauculus designated as C. pauculus strain UM1) was examined for its ability to perform heterotrophic nitrification in the presence of Cu(2+) and Ni(2+) and to metabolize the xenobiotic phenol. The bacterium heterotrophically nitrified well when either 1 mM Cu(2+) or 0.5 mM Ni(2+) was present in either enriched or minimal medium. The organism also used phenol as a sole carbon source in either the presence or absence of 1 mM Cu(2+) or 0.5 mM Ni(2+). The ability of this isolate to perform a number of different metabolisms, its noteworthy resistance to copper and nickel, and its potential use as a bioremediation agent are discussed.

Primary and heterotrophic productivity relate to multikingdom diversity in a hypersaline mat

Energy Technology Data Exchange (ETDEWEB)

Bernstein, Hans C.; Brislawn, Colin J.; Dana, Karl; Flores-Wentz, Tobias; Cory, Alexandra B.; Fansler, Sarah J.; Fredrickson, James K.; Moran, James J.

2017-10-01

Benthic microbial ecosystems are widespread yet knowledge gaps still remain on the relationships between the diversity of species across kingdoms and productivity. Here, we ask two fundamental questions: 1) How does species diversity relate to the rates of primary and heterotrophic productivity? 2) How do diel variations in light-energy inputs influence productivity and microbiome diversity? To answer these questions, microbial mats from a magnesium sulfate hypersaline Lake were used to establish microcosms. Both the number and relatedness between bacterial and eukaryotic taxa in the microbiome were assayed via amplicon based sequencing of 16S and 18S rRNA genes over two diel cycles. These results correlated with biomass productivity obtained from substrate-specific 13C stable isotope incorporation that enabled comparisons between primary and heterotrophic productivity. Both bacterial and eukaryotic species richness and evenness were related only to the rates of 13C labeled glucose and acetate biomass incorporation. Interestingly, measures of these heterotrophic relationships changed from positive and negative correlations depending on carbon derived from glucose and acetate, respectively. Bacterial and eukaryotic diversity of this ecosystem is also controlled, in part, energy constraints imposed by changing irradiance over a diel cycle.

Soil, Groundwater, Surface Water, and Sediments of Kennedy Space Center, Florida: Background Chemical and Physical Characteristics

Science.gov (United States)

Shmalzer, Paul A.; Hensley, Melissa A.; Mota, Mario; Hall, Carlton R.; Dunlevy, Colleen A.

2000-01-01

This study documented background chemical composition of soils, groundwater, surface; water, and sediments of Kennedy Space Center. Two hundred soil samples were collected, 20 each in 10 soil classes. Fifty-one groundwater wells were installed in 4 subaquifers of the Surficial Aquifer and sampled; there were 24 shallow, 16 intermediate, and 11 deep wells. Forty surface water and sediment samples were collected in major watershed basins. All samples were away from sites of known contamination. Samples were analyzed for organochlorine pesticides, aroclors, chlorinated herbicides, polycyclic aromatic hydrocarbons (PAH), total metals, and other parameters. All aroclors (6) were below detection in all media. Some organochlorine pesticides were detected at very low frequencies in soil, sediment, and surface water. Chlorinated herbicides were detected at very low frequencies in soil and sediments. PAH occurred in low frequencies in soiL, shallow groundwater, surface water, and sediments. Concentrations of some metals differed among soil classes, with subaquifers and depths, and among watershed basins for surface water but not sediments. Most of the variation in metal concentrations was natural, but agriculture had increased Cr, Cu, Mn, and Zn.

The role of fire on soil mounds and surface roughness in the Mojave Desert

Science.gov (United States)

Soulard, Christopher E.; Esque, Todd C.; Bedford, David R.; Bond, Sandra

2013-01-01

A fundamental question in arid land management centers on understanding the long-term effects of fire on desert ecosystems. To assess the effects of fire on surface topography, soil roughness, and vegetation, we used terrestrial (ground-based) LiDAR to quantify the differences between burned and unburned surfaces by creating a series of high-resolution vegetation structure and bare-earth surface models for six sample plots in the Grand Canyon-Parashant National Monument, Arizona. We find that 11 years following prescribed burns, mound volumes, plant heights, and soil-surface roughness were significantly lower on burned relative to unburned plots. Results also suggest a linkage between vegetation and soil mounds, either through accretion or erosion mechanisms such as wind and/or water erosion. The biogeomorphic implications of fire-induced changes are significant. Reduced plant cover and altered soil surfaces from fire likely influence seed residence times, inhibit seed germination and plant establishment, and affect other ecohydrological processes.

Draft Genome Sequence of Limnobacter sp. Strain CACIAM 66H1, a Heterotrophic Bacterium Associated with Cyanobacteria

OpenAIRE

da Silva, F?bio Daniel Flor?ncio; Lima, Alex Ranieri Jer?nimo; Moraes, Pablo Henrique Gon?alves; Siqueira, Andrei Santos; Dall?Agnol, Leonardo Teixeira; Bara?na, Anna Rafaella Ferreira; Martins, Luisa Car?cio; Oliveira, Karol Guimar?es; de Lima, Clayton Pereira Silva; Nunes, M?rcio Roberto Teixeira; Vianez-J?nior, Jo?o L?dio Silva Gon?alves; Gon?alves, Evonnildo Costa

2016-01-01

Ecological interactions between cyanobacteria and heterotrophic prokaryotes are poorly known. To improve the genomic studies of heterotrophic bacterium-cyanobacterium associations, the draft genome sequence (3.2 Mbp) of Limnobacter sp. strain CACIAM 66H1, found in a nonaxenic culture of Synechococcus sp. (cyanobacteria), is presented here.

Activity Concentration for Surface Soil Samples Collected from Arrant, Qena, Egypt

International Nuclear Information System (INIS)

Harb, S.; Salahel Din, K.; Abbady, A.; Moustafa, M.

2010-01-01

Soil samples were collected from four regions from Armant area. Qena, Upper Egypt for measure their natural radioactivity concentrations due to Ra-226, Th-232 and K-40 radionuclides. Thirty-Four surface soil samples were analyzed by using low-level gamma-spectrometric analysis. The average activity concentration for Ra-226 in (Bq/kg) in the collected soil samples were found to be 27.3 ±3.2, 11.4±1.09, 10.6±1.2, and 11.4±1.02 while the average value for Th-232 were 15.1±1.4, 11.1±0.77, 10.8 ± 0.72 and 11.1 ± 0.8 (Bq/kg) for soil samples from North, South, West and East. The corresponding average values for K-40 were 521.4±16.8, 463±14.8, 488.9±15.6 and 344.5±10.7 (Bq/kg), respectively. Based on radionuclides concentration in surface soil samples the radiological effects can be assessed

Calorimetry and thermodynamic aspects of heterotrophic, mixotrophic, and phototrophic growth

NARCIS (Netherlands)

Stockar, von U.; Marison, I.; Janssen, M.G.J.; Patino, R.

2011-01-01

A simple stoichiometric model is proposed linking the biomass yield to the enthalpy and Gibbs energy changes in chemo-heterotrophic, mixotrophic, and photo-autotrophic microbial growth. A comparison with calorimetric experiments on the algae Chlorella vulgaris and Chlorella sorokiniana confirmed the

Introducing litter quality to the ecosystem model LPJ-GUESS: Effects on short- and long-term soil carbon dynamics

Science.gov (United States)

Portner, Hanspeter; Wolf, Annett; Rühr, Nadine; Bugmann, Harald

2010-05-01

Many biogeochemical models have been applied to study the response of the carbon cycle to changes in climate, whereby the process of carbon uptake (photosynthesis) has usually gained more attention than the equally important process of carbon release by respiration. The decomposition of soil organic matter is driven by a combination of factors like soil temperature, soil moisture and litter quality. We have introduced dependence on litter substrate quality to heterotrophic soil respiration in the ecosystem model LPJ-GUESS [Smith et al.(2001)]. We were interested in differences in model projections before and after the inclusion of the dependency both in respect to short- and long-term soil carbon dynamics. The standard implementation of heterotrophic soil respiration in LPJ-GUESS is a simple carbon three-pool model whose decay rates are dependent on soil temperature and soil moisture. We have added dependence on litter quality by coupling LPJ-GUESS to the soil carbon model Yasso07 [Tuomi et al.(2008)]. The Yasso07 model is based on an extensive number of measurements of litter decomposition of forest soils. Apart from the dependence on soil temperature and soil moisture, the Yasso07 model uses carbon soil pools representing different substrate qualities: acid hydrolyzable, water soluble, ethanol soluble, lignin compounds and humus. Additionally Yasso07 differentiates between woody and non-woody litter. In contrary to the reference implementation of LPJ-GUESS, in the new model implementation, the litter now is divided according to its specific quality and added to the corresponding soil carbon pool. The litter quality thereby differs between litter source (leaves, roots, stems) and plant functional type (broadleaved, needleleaved, grass). The two contrasting model implementations were compared and validated at one specific CarboEuropeIP site (Lägern, Switzerland) and on a broader scale all over Switzerland. Our focus lay on the soil respiration for the years 2006

Effect of the grain size of the soil on the measured activity and variation in activity in surface and subsurface soil samples

International Nuclear Information System (INIS)

Sulaiti, H.A.; Rega, P.H.; Bradley, D.; Dahan, N.A.; Mugren, K.A.; Dosari, M.A.

2014-01-01

Correlation between grain size and activity concentrations of soils and concentrations of various radionuclides in surface and subsurface soils has been measured for samples taken in the State of Qatar by gamma-spectroscopy using a high purity germanium detector. From the obtained gamma-ray spectra, the activity concentrations of the 238U (226Ra) and /sup 232/ Th (/sup 228/ Ac) natural decay series, the long-lived naturally occurring radionuclide 40 K and the fission product radionuclide 137CS have been determined. Gamma dose rate, radium equivalent, radiation hazard index and annual effective dose rates have also been estimated from these data. In order to observe the effect of grain size on the radioactivity of soil, three grain sizes were used i.e., smaller than 0.5 mm; smaller than 1 mm and greater than 0.5 mm; and smaller than 2 mm and greater than 1 mm. The weighted activity concentrations of the 238U series nuclides in 0.5-2 mm grain size of sample numbers was found to vary from 2.5:f:0.2 to 28.5+-0.5 Bq/kg, whereas, the weighted activity concentration of 4 degree K varied from 21+-4 to 188+-10 Bq/kg. The weighted activity concentrations of 238U series and 4 degree K have been found to be higher in the finest grain size. However, for the 232Th series, the activity concentrations in the 1-2 mm grain size of one sample were found to be higher than in the 0.5-1 mm grain size. In the study of surface and subsurface soil samples, the activity concentration levels of 238 U series have been found to range from 15.9+-0.3 to 24.1+-0.9 Bq/kg, in the surface soil samples (0-5 cm) and 14.5+-0.3 to 23.6+-0.5 Bq/kg in the subsurface soil samples (5-25 cm). The activity concentrations of 232Th series have been found to lie in the range 5.7+-0.2 to 13.7+-0.5 Bq/kg, in the surface soil samples (0-5 cm)and 4.1+-0.2 to 15.6+-0.3 Bq/kg in the subsurface soil samples (5-25 cm). The activity concentrations of 4 degree K were in the range 150+-8 to 290+-17 Bq/kg, in the surface

Remote Sensing of Surface Soil Moisture using Semi-Concurrent Radar and Radiometer Observations

Science.gov (United States)

Li, L.; Ouellette, J. D.; Colliander, A.; Cosh, M. H.; Caldwell, T. G.; Walker, J. P.

2017-12-01

Radar backscatter and radiometer brightness temperature both have well-documented sensitivity to surface soil moisture, particularly in the microwave regime. While radiometer-derived soil moisture retrievals have been shown to be stable and accurate, they are only available at coarse spatial resolutions on the order of tens of kilometers. Backscatter from Synthetic Aperture Radar (SAR) is similarly sensitive to soil moisture but can yield higher spatial resolutions, with pixel sizes about an order of magnitude smaller. Soil moisture retrieval from radar backscatter is more difficult, however, due to the combined sensitivity of radar scattering to surface roughness, vegetation structure, and soil moisture. The algorithm uses a time-series of SAR data to retrieval soil moisture information, constraining the SAR-derived soil moisture estimates with radiometer observations. This effectively combines the high spatial resolution offered by SAR with the precision offered by passive radiometry. The algorithm is a change detection approach which maps changes in the radar backscatter to changes in surface soil moisture. This new algorithm differs from existing retrieval techniques in that it does not require ancillary vegetation information, but assumes vegetation and surface roughness are stable between pairs of consecutive radar overpasses. Furthermore, this method does not require a radar scattering model for the vegetation canopy, nor the use of a training data set. The algorithm works over a long time series, and is constrained by hard bounds which are defined using a coarse-resolution radiometer soil moisture product. The presentation will include soil moisture retrievals from Soil Moisture Active/Passive (SMAP) SAR data. Two sets of optimization bounds will constrain the radar change detection algorithm: one defined by SMAP radiometer retrievals and one defined by WindSat radiometer retrievals. Retrieved soil moisture values will be presented on a world map and will

Soil surface temperatures reveal moderation of the urban heat island effect by trees and shrubs

DEFF Research Database (Denmark)

Edmondson, Jill L; Stott, Iain; Davies, Zoe G

2016-01-01

months increased by 0.6 °C over the 5 km from the city outskirts to the centre. Trees and shrubs in non-domestic greenspace reduced mean maximum daily soil surface temperatures in the summer by 5.7 °C compared to herbaceous vegetation, but tended to maintain slightly higher temperatures in winter. Trees...... in domestic gardens, which tend to be smaller, were less effective at reducing summer soil surface temperatures. Our findings reveal that the UHI effects soil temperatures at a city-wide scale, and that in their moderating urban soil surface temperature extremes, trees and shrubs may help to reduce...

Global observation-based diagnosis of soil moisture control on land surface flux partition

Science.gov (United States)

Gallego-Elvira, Belen; Taylor, Christopher M.; Harris, Phil P.; Ghent, Darren; Veal, Karen L.; Folwell, Sonja S.

2016-04-01

Soil moisture plays a central role in the partition of available energy at the land surface between sensible and latent heat flux to the atmosphere. As soils dry out, evapotranspiration becomes water-limited ("stressed"), and both land surface temperature (LST) and sensible heat flux rise as a result. This change in surface behaviour during dry spells directly affects critical processes in both the land and the atmosphere. Soil water deficits are often a precursor in heat waves, and they control where feedbacks on precipitation become significant. State-of-the-art global climate model (GCM) simulations for the Coupled Model Intercomparison Project Phase 5 (CMIP5) disagree on where and how strongly the surface energy budget is limited by soil moisture. Evaluation of GCM simulations at global scale is still a major challenge owing to the scarcity and uncertainty of observational datasets of land surface fluxes and soil moisture at the appropriate scale. Earth observation offers the potential to test how well GCM land schemes simulate hydrological controls on surface fluxes. In particular, satellite observations of LST provide indirect information about the surface energy partition at 1km resolution globally. Here, we present a potentially powerful methodology to evaluate soil moisture stress on surface fluxes within GCMs. Our diagnostic, Relative Warming Rate (RWR), is a measure of how rapidly the land warms relative to the overlying atmosphere during dry spells lasting at least 10 days. Under clear skies, this is a proxy for the change in sensible heat flux as soil dries out. We derived RWR from MODIS Terra and Aqua LST observations, meteorological re-analyses and satellite rainfall datasets. Globally we found that on average, the land warmed up during dry spells for 97% of the observed surface between 60S and 60N. For 73% of the area, the land warmed faster than the atmosphere (positive RWR), indicating water stressed conditions and increases in sensible heat flux

The SMAP Level 4 Surface and Root-zone Soil Moisture (L4_SM) Product

Science.gov (United States)

Reichle, Rolf; Crow, Wade; Koster, Randal; Kimball, John

2010-01-01

The Soil Moisture Active and Passive (SMAP) mission is being developed by NASA for launch in 2013 as one of four first-tier missions recommended by the U.S. National Research Council Committee on Earth Science and Applications from Space in 2007. The primary science objectives of SMAP are to enhance understanding of land surface controls on the water, energy and carbon cycles, and to determine their linkages. Moreover, the high resolution soil moisture mapping provided by SMAP has practical applications in weather and seasonal climate prediction, agriculture, human health, drought and flood decision support. In this paper we describe the assimilation of SMAP observations for the generation of the planned SMAP Level 4 Surface and Root-zone Soil Moisture (L4_SM) product. The SMAP mission makes simultaneous active (radar) and passive (radiometer) measurements in the 1.26-1.43 GHz range (L-band) from a sun-synchronous low-earth orbit. Measurements will be obtained across a 1000 km wide swath using conical scanning at a constant incidence angle (40 deg). The radar resolution varies from 1-3 km over the outer 70% of the swath to about 30 km near the center of the swath. The radiometer resolution is 40 km across the entire swath. The radiometer measurements will allow high-accuracy but coarse resolution (40 km) measurements. The radar measurements will add significantly higher resolution information. The radar is however very sensitive to surface roughness and vegetation structure. The combination of the two measurements allows optimal blending of the advantages of each instrument. SMAP directly observes only surface soil moisture (in the top 5 cm of the soil column). Several of the key applications targeted by SMAP, however, require knowledge of root zone soil moisture (approximately top 1 m of the soil column), which is not directly measured by SMAP. The foremost objective of the SMAP L4_SM product is to fill this gap and provide estimates of root zone soil moisture

Estimation of Surface Soil Moisture in Irrigated Lands by Assimilation of Landsat Vegetation Indices, Surface Energy Balance Products, and Relevance Vector Machines

Directory of Open Access Journals (Sweden)

Alfonso F. Torres-Rua

2016-04-01

Full Text Available Spatial surface soil moisture can be an important indicator of crop conditions on farmland, but its continuous estimation remains challenging due to coarse spatial and temporal resolution of existing remotely-sensed products. Furthermore, while preceding research on soil moisture using remote sensing (surface energy balance, weather parameters, and vegetation indices has demonstrated a relationship between these factors and soil moisture, practical continuous spatial quantification of the latter is still unavailable for use in water and agricultural management. In this study, a methodology is presented to estimate volumetric surface soil moisture by statistical selection from potential predictors that include vegetation indices and energy balance products derived from satellite (Landsat imagery and weather data as identified in scientific literature. This methodology employs a statistical learning machine called a Relevance Vector Machine (RVM to identify and relate the potential predictors to soil moisture by means of stratified cross-validation and forward variable selection. Surface soil moisture measurements from irrigated agricultural fields in Central Utah in the 2012 irrigation season were used, along with weather data, Landsat vegetation indices, and energy balance products. The methodology, data collection, processing, and estimation accuracy are presented and discussed.

Microbial community assembly patterns under incipient conditions in a basaltic soil system

Science.gov (United States)

Sengupta, A.; Stegen, J.; Alves Meira Neto, A.; Wang, Y.; Chorover, J.; Troch, P. A. A.; Maier, R. M.

2017-12-01

In sub-surface environments, the biotic components are critically linked to the abiotic processes. However, there is limited understanding of community establishment, functional associations, and community assembly processes of such microbes in sub-surface environments. This study presents the first analysis of microbial signatures in an incipient terrestrial basalt soil system conducted under controlled conditions. A sub-meter scale sampling of a soil mesocosm revealed the contrasting distribution patterns of simple soil parameters such as bulk density and electrical conductivity. Phylogenetic analysis of 16S rRNA gene indicated the presence of a total 40 bacterial and archaeal phyla, with high relative abundance of Actinobacteria on the surface and highest abundance of Proteobacteria throughout the system. Community diversity patterns were inferred to be dependent on depth profile and average water content in the system. Predicted functional gene analysis suggested mixotrophy lifestyles with both autotrophic and heterotrophic metabolisms, likelihood of a unique salt tolerant methanogenic pathway with links to novel Euryarchea, signatures of an incomplete nitrogen cycle, and predicted enzymes of extracellular iron (II) to iron (III) conversion followed by intracellular uptake, transport and regulation. Null modeling revealed microbial community assembly was predominantly governed by variable selection, but the influence of the variable selection did not show systematic spatial structure. The presence of significant heterogeneity in predicted functions and ecologically deterministic shifts in community composition in a homogeneous incipient basalt highlights the complexity exhibited by microorganisms even in the simplest of environmental systems. This presents an opportunity to further develop our understanding of how microbial communities establish, evolve, impact, and respond in sub-surface environments.

Using advanced surface complexation models for modelling soil chemistry under forests: Solling forest, Germany

Energy Technology Data Exchange (ETDEWEB)

Bonten, Luc T.C., E-mail: luc.bonten@wur.nl [Alterra-Wageningen UR, Soil Science Centre, P.O. Box 47, 6700 AA Wageningen (Netherlands); Groenenberg, Jan E. [Alterra-Wageningen UR, Soil Science Centre, P.O. Box 47, 6700 AA Wageningen (Netherlands); Meesenburg, Henning [Northwest German Forest Research Station, Abt. Umweltkontrolle, Sachgebiet Intensives Umweltmonitoring, Goettingen (Germany); Vries, Wim de [Alterra-Wageningen UR, Soil Science Centre, P.O. Box 47, 6700 AA Wageningen (Netherlands)

2011-10-15

Various dynamic soil chemistry models have been developed to gain insight into impacts of atmospheric deposition of sulphur, nitrogen and other elements on soil and soil solution chemistry. Sorption parameters for anions and cations are generally calibrated for each site, which hampers extrapolation in space and time. On the other hand, recently developed surface complexation models (SCMs) have been successful in predicting ion sorption for static systems using generic parameter sets. This study reports the inclusion of an assemblage of these SCMs in the dynamic soil chemistry model SMARTml and applies this model to a spruce forest site in Solling Germany. Parameters for SCMs were taken from generic datasets and not calibrated. Nevertheless, modelling results for major elements matched observations well. Further, trace metals were included in the model, also using the existing framework of SCMs. The model predicted sorption for most trace elements well. - Highlights: > Surface complexation models can be well applied in field studies. > Soil chemistry under a forest site is adequately modelled using generic parameters. > The model is easily extended with extra elements within the existing framework. > Surface complexation models can show the linkages between major soil chemistry and trace element behaviour. - Surface complexation models with generic parameters make calibration of sorption superfluous in dynamic modelling of deposition impacts on soil chemistry under nature areas.

Using advanced surface complexation models for modelling soil chemistry under forests: Solling forest, Germany

International Nuclear Information System (INIS)

Bonten, Luc T.C.; Groenenberg, Jan E.; Meesenburg, Henning; Vries, Wim de

2011-01-01

Various dynamic soil chemistry models have been developed to gain insight into impacts of atmospheric deposition of sulphur, nitrogen and other elements on soil and soil solution chemistry. Sorption parameters for anions and cations are generally calibrated for each site, which hampers extrapolation in space and time. On the other hand, recently developed surface complexation models (SCMs) have been successful in predicting ion sorption for static systems using generic parameter sets. This study reports the inclusion of an assemblage of these SCMs in the dynamic soil chemistry model SMARTml and applies this model to a spruce forest site in Solling Germany. Parameters for SCMs were taken from generic datasets and not calibrated. Nevertheless, modelling results for major elements matched observations well. Further, trace metals were included in the model, also using the existing framework of SCMs. The model predicted sorption for most trace elements well. - Highlights: → Surface complexation models can be well applied in field studies. → Soil chemistry under a forest site is adequately modelled using generic parameters. → The model is easily extended with extra elements within the existing framework. → Surface complexation models can show the linkages between major soil chemistry and trace element behaviour. - Surface complexation models with generic parameters make calibration of sorption superfluous in dynamic modelling of deposition impacts on soil chemistry under nature areas.

Implementing a physical soil water flow model with minimal soil characteristics and added value offered by surface soil moisture measurements assimilation.

Science.gov (United States)

Chanzy, André

2010-05-01

climatic data. The strategy takes profit of all work made on soil texture as a proxi of soil hydraulic through pedotransfer functions. It also takes into account the constraints in soil moisture variations after important precipitation events. Performances on soil moisture are assessed by considering both the soil moisture accuracy and the ability of detecting a soil moisture threshold. o The added value of soil moisture measurements. The aim is to evaluate to which extent we can improve soil moisture simulations by assimilating a few soil moisture measurements made in the surface layer (ploughed layers). We focus on such a layer since moisture can be derived from remote sensing observations or by using in situ sensors (capacitance sensor, TDR) with minimal effort. The validity of such measurements to represent the soil moisture at the field scale is analysed. It is shown that relative variations in soil moisture are much easier to obtain than an absolute characterisation of the soil moisture measurements. We evaluate the value of assimilating surface measurement in the TEC model and how we can deal with a measurement of relative soil moisture variations (in order to prevent a tedious calibration process). Again the performances of the approach are evaluated with the soil moisture accuracy and the ability of detecting a soil moisture threshold.

Development and application of a most probable number-PCR assay to quantify flagellate populations in soil samples

DEFF Research Database (Denmark)

Fredslund, Line; Ekelund, Flemming; Jacobsen, Carsten Suhr

2001-01-01

This paper reports on the first successful molecular detection and quantification of soil protozoa. Quantification of heterotrophic flagellates and naked amoebae in soil has traditionally relied on dilution culturing techniques, followed by most-probable-number (MPN) calculations. Such methods...... are biased by differences in the culturability of soil protozoa and are unable to quantify specific taxonomic groups, and the results are highly dependent on the choice of media and the skills of the microscopists. Successful detection of protozoa in soil by DNA techniques requires (i) the development...

Role of the Soil Thermal Inertia in the short term variability of the surface temperature and consequences for the soil-moisture temperature feedback

Science.gov (United States)

Cheruy, Frederique; Dufresne, Jean-Louis; Ait Mesbah, Sonia; Grandpeix, Jean-Yves; Wang, Fuxing

2017-04-01

A simple model based on the surface energy budget at equilibrium is developed to compute the sensitivity of the climatological mean daily temperature and diurnal amplitude to the soil thermal inertia. It gives a conceptual framework to quantity the role of the atmospheric and land surface processes in the surface temperature variability and relies on the diurnal amplitude of the net surface radiation, the sensitivity of the turbulent fluxes to the surface temperature and the thermal inertia. The performances of the model are first evaluated with 3D numerical simulations performed with the atmospheric (LMDZ) and land surface (ORCHIDEE) modules of the Institut Pierre Simon Laplace (IPSL) climate model. A nudging approach is adopted, it prevents from using time-consuming long-term simulations required to account for the natural variability of the climate and allow to draw conclusion based on short-term (several years) simulations. In the moist regions the diurnal amplitude and the mean surface temperature are controlled by the latent heat flux. In the dry areas, the relevant role of the stability of the boundary layer and of the soil thermal inertia is demonstrated. In these regions, the sensitivity of the surface temperature to the thermal inertia is high, due to the high contribution of the thermal flux to the energy budget. At high latitudes, when the sensitivity of turbulent fluxes is dominated by the day-time sensitivity of the sensible heat flux to the surface temperature and when this later is comparable to the thermal inertia term of the sensitivity equation, the surface temperature is also partially controlled by the thermal inertia which can rely on the snow properties; In the regions where the latent heat flux exhibits a high day-to-day variability, such as transition regions, the thermal inertia has also significant impact on the surface temperature variability . In these not too wet (energy limited) and not too dry (moisture-limited) soil moisture (SM

An Amoebal Grazer of Cyanobacteria Requires Cobalamin Produced by Heterotrophic Bacteria.

Science.gov (United States)

Ma, Amy T; Beld, Joris; Brahamsha, Bianca

2017-05-15

Amoebae are unicellular eukaryotes that consume microbial prey through phagocytosis, playing a role in shaping microbial food webs. Many amoebal species can be cultivated axenically in rich media or monoxenically with a single bacterial prey species. Here, we characterize heterolobosean amoeba LPG3, a recent natural isolate, which is unable to grow on unicellular cyanobacteria, its primary food source, in the absence of a heterotrophic bacterium, a Pseudomonas species coisolate. To investigate the molecular basis of this requirement for heterotrophic bacteria, we performed a screen using the defined nonredundant transposon library of Vibrio cholerae , which implicated genes in corrinoid uptake and biosynthesis. Furthermore, cobalamin synthase deletion mutations in V. cholerae and the Pseudomonas species coisolate do not support the growth of amoeba LPG3 on cyanobacteria. While cyanobacteria are robust producers of a corrinoid variant called pseudocobalamin, this variant does not support the growth of amoeba LPG3. Instead, we show that it requires cobalamin that is produced by the Pseudomonas species coisolate. The diversity of eukaryotes utilizing corrinoids is poorly understood, and this amoebal corrinoid auxotroph serves as a model for examining predator-prey interactions and micronutrient transfer in bacterivores underpinning microbial food webs. IMPORTANCE Cyanobacteria are important primary producers in aquatic environments, where they are grazed upon by a variety of phagotrophic protists and, hence, have an impact on nutrient flux at the base of microbial food webs. Here, we characterize amoebal isolate LPG3, which consumes cyanobacteria as its primary food source but also requires heterotrophic bacteria as a source of corrinoid vitamins. Amoeba LPG3 specifically requires the corrinoid variant produced by heterotrophic bacteria and cannot grow on cyanobacteria alone, as they produce a different corrinoid variant. This same corrinoid specificity is also

Pyruvic Oxime Nitrification and Copper and Nickel Resistance by a Cupriavidus pauculus, an Active Heterotrophic Nitrifier-Denitrifier

Directory of Open Access Journals (Sweden)

Miguel Ramirez

2014-01-01

Full Text Available Heterotrophic nitrifiers synthesize nitrogenous gasses when nitrifying ammonium ion. A Cupriavidus pauculus, previously thought an Alcaligenes sp. and noted as an active heterotrophic nitrifier-denitrifier, was examined for its ability to produce nitrogen gas (N2 and nitrous oxide (N2O while heterotrophically nitrifying the organic substrate pyruvic oxime [CH3–C(NOH–COOH]. Neither N2 nor N2O were produced. Nucleotide and phylogenetic analyses indicated that the organism is a member of a genus (Cupriavidus known for its resistance to metals and its metabolism of xenobiotics. The microbe (a Cupriavidus pauculus designated as C. pauculus strain UM1 was examined for its ability to perform heterotrophic nitrification in the presence of Cu2+ and Ni2+ and to metabolize the xenobiotic phenol. The bacterium heterotrophically nitrified well when either 1 mM Cu2+ or 0.5 mM Ni2+ was present in either enriched or minimal medium. The organism also used phenol as a sole carbon source in either the presence or absence of 1 mM Cu2+ or 0.5 mM Ni2+. The ability of this isolate to perform a number of different metabolisms, its noteworthy resistance to copper and nickel, and its potential use as a bioremediation agent are discussed.

Source apportionment of polycyclic aromatic hydrocarbons in surface soil in Tianjin, China

International Nuclear Information System (INIS)

Zuo, Q.; Duan, Y.H.; Yang, Y.; Wang, X.J.; Tao, S.

2007-01-01

Principal component analysis and multiple linear regression were applied to apportion sources of polycyclic aromatic hydrocarbons (PAHs) in surface soils of Tianjin, China based on the measured PAH concentrations of 188 surface soil samples. Four principal components were identified representing coal combustion, petroleum, coke oven plus biomass burning, and chemical industry discharge, respectively. The contributions of major sources were quantified as 41% from coal, 20% from petroleum, and 39% from coking and biomass, which are compatible with PAH emissions estimated based on fuel consumption and emission factors. When the study area was divided into three zones with distinctive differences in soil PAH concentration and profile, different source features were unveiled. For the industrialized Tanggu-Hangu zone, the major contributors were coking (43%), coal (37%) and vehicle exhaust (20%). In rural area, however, in addition to the three main sources, biomass burning was also important (13%). In urban-suburban zone, incineration accounted for one fourth of the total. - PAHs in surface soil of Tianjin were apportioned and coal combustion, vehicle exhaust, coke production, and biomass burning were found to be the major sources

Lead concentrations and risk exposure assessment in surface soils ...

African Journals Online (AJOL)

Lead concentrations and risk exposure assessment in surface soils at residential lands previously used for auto-mechanic and auto-welding activities in Port Harcourt, Nigeria. ... Journal of Applied Sciences and Environmental Management.

Circadian cycles in growth and feeding rates of heterotrophic protist plankton

DEFF Research Database (Denmark)

Jakobsen, Hans Henrik; Strom, S.L.

2004-01-01

Growth and feeding rates of four species of planktonic marine heterotrophic protists showed pronounced diel cycles. In most cases, rates were higher during the day and lower at night. However, for the ciliate Strobilidium sp., growth was highest at night. In another ciliate species, Balanion...... comatum, no day-night difference in growth and feeding rates was found. Maintenance of day-night rate differences during 24-h exposures to continuous darkness demonstrated that most of these protists had circadian cycles. The heterotrophic dinoflagellate Oxyrrhis marina exhibited a clear irradiance...... to culturing in a day: night light cycle in O. marina and found that resetting the circadian cycle in this dinoflagellate temporarily arrested growth and feeding. We suggest that protists use a time-integrated light threshold rather than an instantaneous irradiance to maintain the circadian cell cycle...

Autotrophic and heterotrophic activity in Arctic first-year sea ice

DEFF Research Database (Denmark)

Søgaard, Dorte Haubjerg; Kristensen, Morten; Rysgaard, Søren

2010-01-01

in plastic bags with subsequent melting and measurements of changes in total O2 concentrations. The standard incubations showed that the annual succession followed a distinctive pattern, with a low, almost balancing heterotrophic and autotrophic activity during February and March. This period was followed...

Soil treatment engineering

Science.gov (United States)

Ivica, Kisic; Zeljka, Zgorelec; Aleksandra, Percin

2017-10-01

Soil is loose skin of the Earth, located between the lithosphere and atmosphere, which originated from parent material under the influence of pedogenetic processes. As a conditionally renewable natural resource, soil has a decisive influence on sustainable development of global economy, especially on sustainable agriculture and environmental protection. In recent decades, a growing interest prevails for non-production soil functions, primarily those relating to environmental protection. It especially refers to protection of natural resources whose quality depends directly on soil and soil management. Soil contamination is one of the most dangerous forms of soil degradation with the consequences that are reflected in virtually the entire biosphere, primarily at heterotrophic organisms, and also at mankind as a food consumer. Contamination is correlated with the degree of industrialization and intensity of agrochemical usage. It is typically caused by industrial activity, agricultural chemicals or improper disposal of waste. The negative effects caused by pollution are undeniable: reduced agricultural productivity, polluted water sources and raw materials for food are only a few of the effects of soil degradation, while almost all human diseases (excluding AIDS) may be partly related to the transport of contaminants, in the food chain or the air, to the final recipients - people, plants and animals. The remediation of contaminated soil is a relatively new scientific field which is strongly developing in the last 30 years and becoming a more important subject. In order to achieve quality remediation of contaminated soil it is very important to conduct an inventory as accurately as possible, that is, to determine the current state of soil contamination.

The Effects of Different Tillage Methods on Available Soil Potassium Measured by Various Extractors in a Soil with High Specific Surface Area

Directory of Open Access Journals (Sweden)

M. Hosseini

2016-02-01

Full Text Available Introduction: The effects of any tillage method on soil properties, depends on location (soil, water and air and the number of (years their implementation. Soil compaction reduces yield through increased soil mechanical resistance against root growth and lower water and nutrient use efficiency (Gamda et al. 18 & Ishagh et al 23. Soil surface and sub surface compaction both reduce yield due to limited root growth and plant potassium uptake (Doulan et al. 14. Sabt et al. (50 reported that in the study area, which the lands are mostly illite clay (high specific surface area with sufficient nitrogen, soil potassium is the most important limiting factor for the growth of wheat.Considering the point that loess soils in Golestan Province have a high specific surface area,they can provide potassium for plants to produce crop, but for a higher production, potassium fertilizers should be used. Previous studies indicated that production of wheat is limited due to potassium deficiency (4, 49, 54 and 57. In these soils with a high specific surface area, the speed of movement of potassium from the soil solution is low, and doing solimits wheat yield.In loess soils containing high illite and high specific surface area (eg, soilsin the series of Rahmat Abad of Gorgan, ammonium acetate measured potassium on exchange and solution surfaces, which is highly correlated with grain yield (54 . There is a high correlation between grain yield with overload of potassium and Na TPB extraction (57. The aim of this study was to absorb potassium (limiting factor for plant growth with different tillage systemsat different depths. International recommendations towards reducing the depth and intensity of tillage (from minimum tillage to no-tillage in order to reduce erosion and oxidation of organic substances plays an important role in determining the amount of greenhouse gases. If potassium absorption does not reduceafter reducing tillage intensity,low or no-tillage methods

Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields.

Science.gov (United States)

Uga, Yusaku; Hanzawa, Eiko; Nagai, Shinsei; Sasaki, Kazuhiro; Yano, Masahiro; Sato, Tadashi

2012-01-01

Specific Indonesian lowland rice (Oryza sativa L.) cultivars elongate thick primary roots on the soil surface of paddy fields. To clarify the genetic factors controlling soil-surface rooting, we performed quantitative trait locus (QTL) analyses using 124 recombinant inbred lines (RILs) derived from a cross between Gemdjah Beton, an Indonesian lowland rice cultivar with soil-surface roots, and Sasanishiki, a Japanese lowland rice cultivar without soil-surface roots. These cultivars and the RILs were tested for soil-surface rooting in a paddy field. We identified four regions of chromosomes 3, 4, 6, and 7 that were associated with soil-surface rooting in the field. Among them, one major QTL was located on the long arm of chromosome 7. This QTL explained 32.5-53.6% of the total phenotypic variance across three field evaluations. To perform fine mapping of this QTL, we measured the basal root growth angle of crown roots at the seedling stage in seven BC(2)F(3) recombinant lines grown in small cups in a greenhouse. The QTL was mapped between markers RM21941 and RM21976, which delimit an 812-kb interval in the reference cultivar Nipponbare. We have designated this QTL qSOR1 (quantitative trait locus for SOIL SURFACE ROOTING 1).

Selection of soil hydraulic properties in a land surface model using remotely-sensed soil moisture and surface temperature

Science.gov (United States)

Shellito, P. J.; Small, E. E.; Gutmann, E. D.

2013-12-01

Synoptic-scale weather is heavily influenced by latent and sensible heating from the land surface. The partitioning of available energy between these two fluxes as well as the distribution of moisture throughout the soil column is controlled by a unique set of soil hydraulic properties (SHPs) at every location. Weather prediction systems, which use coupled land surface and atmospheric models in their forecasts, must therefore be parameterized with estimates of SHPs. Currently, land surface models (LSMs) obtain SHP values by assuming a correlation exists between SHPs and the soil type, which the USDA maps in 12 classes. This method is spurious because texture is only one control of many that affects SHPs. Alternatively, SHPs can be obtained by calibrating them within the framework of an LSM. Because remotely-sensed data have the potential for continent-wide application, there is a critical need to understand their specific role in calibration efforts and the extent to which such calibrated SHPs can improve model simulations. This study focuses on SHP calibration with soil moisture content (SMC) and land surface temperature (Ts), data that are available from the SMOS and MODIS satellite missions, respectively. The scientific goals of this study are: (1) What is the model performance tradeoff between weighting SMC and Ts differently during the calibration process? (2) What can the tradeoff between calibration using in-situ and remotely-sensed SMC reveal about SHP scaling? (3) How are these relationships influenced by climatic regime and vegetation type? (4) To what extent can calibrated SHPs improve model performance over that of texture-based SHPs? Model calibrations are carried out within the framework of the Noah LSM using the Shuffled Complex Evolution Metropolis (SCEM-UA) algorithm in five different climatic regimes. At each site, a five-dimensional parameter space of SHPs is searched to find the location that minimizes the difference between observed and

Daily changes of radon concentration in soil gas under influence of atmospheric factors: room temperature, soil surface temperature and relative humidity

International Nuclear Information System (INIS)

Lara, Evelise G.; Oliveira, Arno Heeren de

2015-01-01

This work aims at relating the daily change in the radon concentration in soil gas in a Red Yellow Acrisol (SiBCS) under influence of atmospheric factors: room temperature, soil surface temperature and relative humidity. The 226 Ra, 232 Th, U content and permeability were also performed. The measurements of radon soil gas were carried out by using an AlphaGUARD monitor. The 226 Ra activity concentration was made by Gamma Spectrometry (HPGe); the permeability was carried out using the RADON-JOK permeameter and ICP-MS analysis to 232 Th and U content. The soil permeability is 5.0 x 10 -12 , which is considered average. The 226 Ra (22.2 ± 0.3 Bq.m -3 ); U content (73.4 ± 3.6 Bq.kg -1 ) and 232 Th content (55.3 ± 4.0 Bq.kg -1 ) were considered above of average concentrations, according to mean values for soils typical (~ 35.0 Bq.kg -1 ) by UNSCEAR. The results showed a difference of 26.0% between the highest and the lowest concentration of radon in soil gas: at midnight (15.5 ± 1.0 kBq.m -3 ) and 3:00 pm, the highest mean radon concentration (21.0 ± 1.0 kBq.m -3 ). The room temperature and surface soil temperature showed equivalent behavior and the surface soil temperature slightly below room temperature during the entire monitoring time. Nevertheless, the relative humidity showed the highest cyclical behavior, showing a higher relationship with the radon concentration in soil gas. (author)

Draft Genome Sequence of Limnobacter sp. Strain CACIAM 66H1, a Heterotrophic Bacterium Associated with Cyanobacteria.

Science.gov (United States)

da Silva, Fábio Daniel Florêncio; Lima, Alex Ranieri Jerônimo; Moraes, Pablo Henrique Gonçalves; Siqueira, Andrei Santos; Dall'Agnol, Leonardo Teixeira; Baraúna, Anna Rafaella Ferreira; Martins, Luisa Carício; Oliveira, Karol Guimarães; de Lima, Clayton Pereira Silva; Nunes, Márcio Roberto Teixeira; Vianez-Júnior, João Lídio Silva Gonçalves; Gonçalves, Evonnildo Costa

2016-05-19

Ecological interactions between cyanobacteria and heterotrophic prokaryotes are poorly known. To improve the genomic studies of heterotrophic bacterium-cyanobacterium associations, the draft genome sequence (3.2 Mbp) of Limnobacter sp. strain CACIAM 66H1, found in a nonaxenic culture of Synechococcus sp. (cyanobacteria), is presented here. Copyright © 2016 da Silva et al.

The abundance and diversity of heterotrophic bacteria as a function of harvesting frequency of duckweed (Lemna minor L.) in recirculating aquaculture systems.

Science.gov (United States)

Ardiansyah, A; Fotedar, R

2016-07-01

Duckweed (Lemna minor L.) is a potential biofilter for nutrient removal and acts as a substrate for heterotrophic bacteria in recirculating aquaculture systems (RAS). Here, we determined the effects of harvesting frequency of duckweed on heterotrophic bacteria in RAS. Twelve independent RAS consisting of fish-rearing tank, biofilter tank and waste-collection tank were used to study the interactions between duckweed harvest frequencies up to 6 days and the composition, abundance and diversity of heterotrophic bacteria. After 36 days, heterotrophic bacteria in the biofilter tank were primarily Gram-negative cocci or ovoid, coccobacilli, Gram-negative bacilli and Gram-positive bacilli. Most bacterial genera were Bacillus and Pseudomonas while the least common was Acinetobacter. Duckweed harvested after every 2 days produced the highest specific growth rates (SGR) and total harvested biomass of duckweed, but harboured less abundant bacteria, whereas 6-day harvests had a higher growth index (GI) of duckweed than 2-day harvests, but caused a poor relationship between SGR and biomass harvest with the abundance and diversity of heterotrophic bacteria. Stronger correlations (R(2)  > 0·65) between duckweed SGR and biomass harvest with the heterotrophic bacteria diversity were observed at 4-day harvest frequency and the control. This study provides significant information on the interaction between the harvest frequency of duckweed and the composition, abundance and diversity of heterotrophic bacteria in recirculating aquaculture systems (RAS). Different harvest frequencies significantly influence the abundance and diversity of heterotrophic bacteria, which in turn may influence the nitrogen uptake efficiency of the system. The research is useful in improving the efficiency of removing nitrogenous metabolites in RAS directly by the duckweed and associated heterotrophic bacteria. © 2016 The Society for Applied Microbiology.

Open charcoal chamber method for mass measurements of radon exhalation rate from soil surface

International Nuclear Information System (INIS)

Tsapalov, Andrey; Kovler, Konstantin; Miklyaev, Peter

2016-01-01

Radon exhalation rate from the soil surface can serve as an important criterion in the evaluation of radon hazard of the land. Recently published international standard ISO 11665-7 (2012) is based on the accumulation of radon gas in a closed container. At the same time since 1998 in Russia, as a part of engineering and environmental studies for the construction, radon flux measurements are made using an open charcoal chamber for a sampling duration of 3–5 h. This method has a well-defined metrological justification and was tested in both favorable and unfavorable conditions. The article describes the characteristics of the method, as well as the means of sampling and measurement of the activity of radon absorbed. The results of the metrological study suggest that regardless of the sampling conditions (weather, the mechanism and rate of radon transport in the soil, soil properties and conditions), uncertainty of method does not exceed 20%, while the combined standard uncertainty of radon exhalation rate measured from the soil surface does not exceed 30%. The results of the daily measurements of radon exhalation rate from the soil surface at the experimental site during one year are reported. - Highlights: • Radon exhalation rate from the soil surface area of 32 cm"2 can be measured at level of 10 mBq/(m"2s) at the uncertainty ≤30%. • The method has a metrological justification. • No need to consider climate conditions, soil properties and conditions, mechanism and rate of radon transport in the soil.

Heterotrophic ammonium removal characteristics of an aerobic heterotrophic nitrifying-denitrifying bacterium, Providencia rettgeri YL

Institute of Scientific and Technical Information of China (English)

TAYLOR Shauna M; HE Yiliang; ZHAO Bin; HUANG Jue

2009-01-01

Bacterium Providencia rettgeri YL was found to exhibit an unusual ability to heterotrophically nitrify and aerobically denitrify various concentrations of ammonium (NH4+-N). In order to further analyze its removal ability, several experiments were conducted to identify the growth and ammonium removal response in different carbon to nitrogen (C/N) mass ratios, shaking speeds, temperatures, ammonium concentrations and to qualitatively verify the production of nitrogen gas using gas chromatography techniques. Results showed that under optimum conditions (C/N 10, 30℃, 120 r/min), YL can significantly remove low and high concentrations of ammonium within 12 to 48 h of growth. The nitrification products hydroxylamine (NH2OH), nitrite (NO2-) and nitrate (NO3-) as well as the denitrification product, nitrogen gas (N2), were detected under completely aerobic conditions.

Assimilation of ASCAT near-surface soil moisture into the French SIM hydrological model

Science.gov (United States)

Draper, C.; Mahfouf, J.-F.; Calvet, J.-C.; Martin, E.; Wagner, W.

2011-06-01

The impact of assimilating near-surface soil moisture into the SAFRAN-ISBA-MODCOU (SIM) hydrological model over France is examined. Specifically, the root-zone soil moisture in the ISBA land surface model is constrained over three and a half years, by assimilating the ASCAT-derived surface degree of saturation product, using a Simplified Extended Kalman Filter. In this experiment ISBA is forced with the near-real time SAFRAN analysis, which analyses the variables required to force ISBA from relevant observations available before the real time data cut-off. The assimilation results are tested against ISBA forecasts generated with a higher quality delayed cut-off SAFRAN analysis. Ideally, assimilating the ASCAT data will constrain the ISBA surface state to correct for errors in the near-real time SAFRAN forcing, the most significant of which was a substantial dry bias caused by a dry precipitation bias. The assimilation successfully reduced the mean root-zone soil moisture bias, relative to the delayed cut-off forecasts, by close to 50 % of the open-loop value. The improved soil moisture in the model then led to significant improvements in the forecast hydrological cycle, reducing the drainage, runoff, and evapotranspiration biases (by 17 %, 11 %, and 70 %, respectively). When coupled to the MODCOU hydrogeological model, the ASCAT assimilation also led to improved streamflow forecasts, increasing the mean discharge ratio, relative to the delayed cut off forecasts, from 0.68 to 0.76. These results demonstrate that assimilating near-surface soil moisture observations can effectively constrain the SIM model hydrology, while also confirming the accuracy of the ASCAT surface degree of saturation product. This latter point highlights how assimilation experiments can contribute towards the difficult issue of validating remotely sensed land surface observations over large spatial scales.

The solonetzic process in surface soils and buried paleosols and its reflection in the mineralogical soil memory

Science.gov (United States)

Chizhikova, N. P.; Kovda, I. V.; Borisov, A. V.; Shishlina, N. I.

2009-10-01

The development of the solonetzic process in paleosols buried under kurgans and in the modern surface soils has been studied on the basis of the analysis of the clay (memory“ of the solid-phase soil components. The mineralogical characteristics show that the solonetzic process in the modern background soil is more developed. The mineralogical approach allows us to reveal the long-term changes in the soil status; it is less useful for studying the effect of short-term bioclimatic fluctuations. In the latter case, more labile soil characteristics should be used. The mineralogical method, combined with other methods, becomes more informative upon the study of soil chronosequences. Our studies have shown that the data on the clay minerals in the buried paleosols may contain specific information useful for paleoreconstructions that is not provided by other methods.

EFFECT OF SOIL TILLAGE AND PLANT RESIDUE ON SURFACE ROUGHNESS OF AN OXISOL UNDER SIMULATED RAIN

Directory of Open Access Journals (Sweden)

Elói Panachuki

2015-02-01

Full Text Available Surface roughness of the soil is formed by mechanical tillage and is also influenced by the kind and amount of plant residue, among other factors. Its persistence over time mainly depends on the fundamental characteristics of rain and soil type. However, few studies have been developed to evaluate these factors in Latossolos (Oxisols. In this study, we evaluated the effect of soil tillage and of amounts of plant residue on surface roughness of an Oxisol under simulated rain. Treatments consisted of the combination of the tillage systems of no-tillage (NT, conventional tillage (CT, and minimum tillage (MT with rates of plant residue of 0, 1, and 2 Mg ha-1 of oats (Avena strigosa Schreb and 0, 3, and 6 Mg ha-1 of maize (Zea mays L.. Seven simulated rains were applied on each experimental plot, with intensity of 60±2 mm h-1 and duration of 1 h at weekly intervals. The values of the random roughness index ranged from 2.94 to 17.71 mm in oats, and from 5.91 to 20.37 mm in maize, showing that CT and MT are effective in increasing soil surface roughness. It was seen that soil tillage operations carried out with the chisel plow and the leveling disk harrow are more effective in increasing soil roughness than those carried out with the heavy disk harrow and leveling disk harrow. The roughness index of the soil surface decreases exponentially with the increase in the rainfall volume applied under conditions of no tillage without soil cover, conventional tillage, and minimum tillage. The oat and maize crop residue present on the soil surface is effective in maintaining the roughness of the soil surface under no-tillage.

Classification of Surface and Deep Soil Samples Using Linear Discriminant Analysis

International Nuclear Information System (INIS)

Wasim, M.; Ali, M.; Daud, M.

2015-01-01

A statistical analysis was made of the activity concentrations measured in surface and deep soil samples for natural and anthropogenic gamma-emitting radionuclides. Soil samples were obtained from 48 different locations in Gilgit, Pakistan covering about 50 km/sup 2/ areas at an average altitude of 1550 m above sea level. From each location two samples were collected: one from the top soil (2-6 cm) and another from a depth of 6-10 cm. Four radionuclides including /sup 226/Ra, /sup 232/Th, /sup 40/K and /sup 137/Cs were quantified. The data was analyzed using t-test to find out activity concentration difference between the surface and depth samples. At the surface, the median activity concentrations were 23.7, 29.1, 4.6 and 115 Bq kg/sup -1/ for 226Ra, 232Th, 137Cs and 40K respectively. For the same radionuclides, the activity concentrations were respectively 25.5, 26.2, 2.9 and 191 Bq kg/sup -1/ for the depth samples. Principal component analysis (PCA) was applied to explore patterns within the data. A positive significant correlation was observed between the radionuclides /sup 226/Ra and /sup 232/Th. The data from PCA was further utilized in linear discriminant analysis (LDA) for the classification of surface and depth samples. LDA classified surface and depth samples with good predictability. (author)

Texture and geochemistry of surface horizons of Arctic soils from a non-glaciated catchment, SW Spitsbergen

Directory of Open Access Journals (Sweden)

Szymański Wojciech

2016-09-01

Full Text Available Physical and chemical properties of Arctic soils and especially the properties of surface horizons of the soils are very important because they are responsible for the rate and character of plant colonization, development of vegetation cover, and influence the rate and depth of thawing of soils and development of active layer of permafrost during summer. The main aim of the present study is to determine and explain the spatial diversity of selected physical and chemical properties of surface horizons of Arctic soils from the non-glaciated Fuglebekken catchment located in the Hornsund area (SW Spitsbergen by means of geostatistical approach. Results indicate that soil surface horizons in the Fuglebekken catchment are characterized by highly variable physical and chemical properties due to a heterogeneous parent material (marine sediments, moraine, rock debris, tundra vegetation types, and non-uniform influence of seabirds. Soils experiencing the strongest influence of seabird guano have a lower pH than other soils. Soils developed on the lateral moraine of the Hansbreen glacier have the highest pH due to the presence of carbonates in the parent material and a lack or presence of a poorly developed and discontinuous A horizon. The soil surface horizons along the coast of the Hornsund exhibit the highest content of the sand fraction and SiO2. The surface of soils occurring at the foot of the slope of Ariekammen Ridge is characterized by the highest content of silt and clay fractions as well as Al2O3, Fe2O3, and K2O. Soils in the central part of the Fuglebekken catchment are depleted in CaO, MgO, and Na2O in comparison with soils in the other sampling sites, which indicates the highest rate of leaching in this part of the catchment.

A Monte Carlo reflectance model for soil surfaces with three-dimensional structure

Science.gov (United States)

Cooper, K. D.; Smith, J. A.

1985-01-01

A Monte Carlo soil reflectance model has been developed to study the effect of macroscopic surface irregularities larger than the wavelength of incident flux. The model treats incoherent multiple scattering from Lambertian facets distributed on a periodic surface. Resulting bidirectional reflectance distribution functions are non-Lambertian and compare well with experimental trends reported in the literature. Examples showing the coupling of the Monte Carlo soil model to an adding bidirectional canopy of reflectance model are also given.

Americium-241 in surface soil associated with the Hanford site and vicinity

International Nuclear Information System (INIS)

Price, K.R.; Gilbert, R.O.; Gano, K.A.

1981-05-01

Various kinds of surface soil samples were collected and analyzed for Americium-241 ( 241 Am) to examine the feasibility of improving soil sample data for the Hanford Surface Environmental Surveillance Program. Results do not indicate that a major improvement would occur if procedures were changed from the current practices. Conclusions from this study are somewhat tempered by the very low levels of 241 Am ( 241 Am in soil crust (0 to 1.0 cm deep) was greater than the corresponding subsurface layer (1.0 to 2.5 cm deep), and the average concentration of 241 Am in some onsite samples collected near the PUREX facility was greater than comparable samples collected 60 km upwind at an offsite location

Aerobic and heterotrophic nitrogen removal by Enterobacter cloacae CF-S27 with efficient utilization of hydroxylamine.

Science.gov (United States)

Padhi, Soumesh Kumar; Tripathy, Swetaleena; Mohanty, Sriprakash; Maiti, Nikhil Kumar

2017-05-01

Heterotrophic bacterium, Enterobacter cloacae CF-S27 exhibited simultaneous nitrification and aerobic denitrification in presence of high concentration of hydroxylamine. With the initial nitrogen concentration of 100mgL -1 h -1 , ammonium, nitrate and nitrite removal efficiencies were 81%, 99.9% and 92.8%, while the corresponding maximum removal rates reached as high as 11.6, 15.1 and 11.2mgL -1 h -1 respectively. Quantitative amplification by real time PCR and enzyme assay demonstrated that hydroxylamine reductase gene (hao) is actively involved in hetrotrophic nitrification and aerobic denitrification process of Enterobacter cloacae CF-S27. PCR primers were designed targeting amplification of hao gene from diversified environmental soil DNA. The strain Enterobacter cloacae CF-S27 significantly maintained the undetectable amount of dissolved nitrogen throughout 60days of zero water exchange fish culture experiment in domestic wastewater. Copyright © 2017 Elsevier Ltd. All rights reserved.

A compendium of results from long-range alpha detector soil surface monitoring: June 1992--May 1994

International Nuclear Information System (INIS)

Garner, S.E.; Bounds, J.A.; Allander, K.S.; Johnson, J.D.; MacArthur, D.W.; Caress, R.W.

1994-11-01

Soil surface monitors based on long-range alpha detector (LRAD) technology are being used to monitor alpha contamination at various sites in the Department of Energy complex. These monitors, the large soil-surface monitor (LSSM) and the small soil-surface monitor (SSSM), were used to help characterize sites at Fernald, Ohio, and active or inactive firing sites at Sandia National Laboratories and Los Alamos National Laboratory. Monitoring results are presented herein in chronological order

Dryland photoautotrophic soil surface communities endangered by global change

Science.gov (United States)

Rodriguez-Caballero, Emilio; Belnap, Jayne; Büdel, Burkhard; Crutzen, Paul J.; Andreae, Meinrat O.; Pöschl, Ulrich; Weber, Bettina

2018-03-01

Photoautotrophic surface communities forming biological soil crusts (biocrusts) are crucial for soil stability as well as water, nutrient and trace gas cycling at regional and global scales. Quantitative information on their global coverage and the environmental factors driving their distribution patterns, however, are not readily available. We use observations and environmental modelling to estimate the global distribution of biocrusts and their response to global change using future projected scenarios. We find that biocrusts currently covering approximately 12% of Earth's terrestrial surface will decrease by about 25-40% within 65 years due to anthropogenically caused climate change and land-use intensification, responding far more drastically than vascular plants. Our results illustrate that current biocrust occurrence is mainly driven by a combination of precipitation, temperature and land management, and future changes are expected to be affected by land-use and climate change in similar proportion. The predicted loss of biocrusts may substantially reduce the microbial contribution to nitrogen cycling and enhance the emissions of soil dust, which affects the functioning of ecosystems as well as human health and should be considered in the modelling, mitigation and management of global change.

Dryland photoautotrophic soil surface communities endangered by global change

Science.gov (United States)

Rodriguez-Caballero, Emilio; Belnap, Jayne; Büdel, Burkhard; Crutzen, Paul J.; Andreae, Meinrat O.; Pöschl, Ulrich; Weber, Bettina

2018-01-01

Photoautotrophic surface communities forming biological soil crusts (biocrusts) are crucial for soil stability as well as water, nutrient and trace gas cycling at regional and global scales. Quantitative information on their global coverage and the environmental factors driving their distribution patterns, however, are not readily available. We use observations and environmental modelling to estimate the global distribution of biocrusts and their response to global change using future projected scenarios. We find that biocrusts currently covering approximately 12% of Earth’s terrestrial surface will decrease by about 25–40% within 65 years due to anthropogenically caused climate change and land-use intensification, responding far more drastically than vascular plants. Our results illustrate that current biocrust occurrence is mainly driven by a combination of precipitation, temperature and land management, and future changes are expected to be affected by land-use and climate change in similar proportion. The predicted loss of biocrusts may substantially reduce the microbial contribution to nitrogen cycling and enhance the emissions of soil dust, which affects the functioning of ecosystems as well as human health and should be considered in the modelling, mitigation and management of global change.

Revegetation of Acid Rock Drainage (ARD) Producing Slope Surface Using Phosphate Microencapsulation and Artificial Soil

Science.gov (United States)

Kim, Jae Gon

2017-04-01

Oxidation of sulfides produces acid rock drainage (ARD) upon their exposure to oxidation environment by construction and mining activities. The ARD causes the acidification and metal contamination of soil, surface water and groundwater, the damage of plant, the deterioration of landscape and the reduction of slope stability. The revegetation of slope surface is one of commonly adopted strategies to reduce erosion and to increase slope stability. However, the revegetation of the ARD producing slope surface is frequently failed due to its high acidity and toxic metal content. We developed a revegetation method consisting of microencapsualtion and artificial soil in the laboratory. The revegetation method was applied on the ARD producing slope on which the revegetation using soil coverage and seeding was failed and monitored the plant growth for one year. The phosphate solution was applied on sulfide containing rock to form stable Fe-phosphate mineral on the surface of sulfide, which worked as a physical barrier to prevent contacting oxidants such as oxygen and Fe3+ ion to the sulfide surface. After the microencapsulation, two artificial soil layers were constructed. The first layer containing organic matter, dolomite powder and soil was constructed at 2 cm thickness to neutralize the rising acidic capillary water from the subsurface and to remove the dissolved oxygen from the percolating rain water. Finally, the second layer containing seeds, organic matter, nutrients and soil was constructed at 3 cm thickness on the top. After application of the method, the pH of the soil below the artificial soil layer increased and the ARD production from the rock fragments reduced. The plant growth showed an ordinary state while the plant died two month after germination for the previous revegetation trial. No soil erosion occurred from the slope during the one year field test.

RARE OCCURRENCE OF HETEROTROPHIC BACTERIA WITH PATHOGENIC POTENTIAL IN POTABLE WATER

Science.gov (United States)

Since the discovery of Legionella pneumophila, an opportunistic pathogen that is indigenous to water, microbiologists have speculated that there may be other opportunistic pathogens among the numerous heterotrophic bacteria found in potable water. The USEPA developed a series of...

BIODEGRADATION POTENTIALS OF AUTOMOBILE WORKSHOP SOIL MYCOFLORA ON FLOW STATION PETROLEUM SLUDGE WITH AN EXTRA CARBON SOURCE

OpenAIRE

Nosa Omoregbe Obayagbona; Onaiwu Idahosa Enabulele

2013-01-01

The biodegradation potentials of soil mycobiota isolated from six auto mechanic workshops and a farmland in Benin City on flow station crude oil sludge was investigated. Serial dilution and pour plate methods were utilized in the isolation and enumeration of the fungal bioload of the soil samples. The heterotrophic fungal counts ranged from 0.2×103 cfu/g to 3.2×103 cfu/g .Twenty (20) fungal species were identified from the soil samples; Aspergillus flavus, Aspergillus terreus, Aspergillus fum...

Daily changes of radon concentration in soil gas under influence of atmospheric factors: room temperature, soil surface temperature and relative humidity

Energy Technology Data Exchange (ETDEWEB)

Lara, Evelise G.; Oliveira, Arno Heeren de, E-mail: evelise.lara@gmail.com, E-mail: heeren@nuclear.ufmg.br [Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, MG (Brazil). Departamento de Engenharia Nuclear; Rocha, Zildete; Rios, Francisco Javier, E-mail: rochaz@cdtn.br, E-mail: javier@cdtn.br [Centro de Desenvolvimento da Tecnologia Nuclear (CDTN/CNEN-MG), Belo Horizonte, MG (Brazil)

2015-07-01

This work aims at relating the daily change in the radon concentration in soil gas in a Red Yellow Acrisol (SiBCS) under influence of atmospheric factors: room temperature, soil surface temperature and relative humidity. The {sup 226}Ra, {sup 232}Th, U content and permeability were also performed. The measurements of radon soil gas were carried out by using an AlphaGUARD monitor. The {sup 226}Ra activity concentration was made by Gamma Spectrometry (HPGe); the permeability was carried out using the RADON-JOK permeameter and ICP-MS analysis to {sup 232}Th and U content. The soil permeability is 5.0 x 10{sup -12}, which is considered average. The {sup 226}Ra (22.2 ± 0.3 Bq.m{sup -3}); U content (73.4 ± 3.6 Bq.kg{sup -1}) and {sup 232}Th content (55.3 ± 4.0 Bq.kg{sup -1}) were considered above of average concentrations, according to mean values for soils typical (~ 35.0 Bq.kg{sup -1}) by UNSCEAR. The results showed a difference of 26.0% between the highest and the lowest concentration of radon in soil gas: at midnight (15.5 ± 1.0 kBq.m{sup -3}) and 3:00 pm, the highest mean radon concentration (21.0 ± 1.0 kBq.m{sup -3}). The room temperature and surface soil temperature showed equivalent behavior and the surface soil temperature slightly below room temperature during the entire monitoring time. Nevertheless, the relative humidity showed the highest cyclical behavior, showing a higher relationship with the radon concentration in soil gas. (author)

Reductions in soil surface albedo as a function of biochar application rate: implications for global radiative forcing

International Nuclear Information System (INIS)

Verheijen, Frank G A; Bastos, Ana Catarina; Keizer, Jan Jacob; Jeffery, Simon; Van der Velde, Marijn; Penížek, Vít; Beland, Martin

2013-01-01

Biochar can be defined as pyrolysed (charred) biomass produced for application to soils with the aim of mitigating global climate change while improving soil functions. Sustainable biochar application to soils has been estimated to reduce global greenhouse gas emissions by 71–130 Pg CO 2 -C e over 100 years, indicating an important potential to mitigate climate change. However, these estimates ignored changes in soil surface reflection by the application of dark-coloured biochar. Through a laboratory experiment we show a strong tendency for soil surface albedo to decrease as a power decay function with increasing biochar application rate, depending on soil moisture content, biochar application method and land use. Surface application of biochar resulted in strong reductions in soil surface albedo even at relatively low application rates. As a first assessment of the implications for climate change mitigation of these biochar–albedo relationships, we applied a first order global energy balance model to compare negative radiative forcings (from avoided CO 2 emissions) with positive radiative forcings (from reduced soil surface albedos). For a global-scale biochar application equivalent to 120 t ha −1 , we obtained reductions in negative radiative forcings of 5 and 11% for croplands and 11 and 23% for grasslands, when incorporating biochar into the topsoil or applying it to the soil surface, respectively. For a lower global biochar application rate (equivalent to 10 t ha −1 ), these reductions amounted to 13 and 44% for croplands and 28 and 94% for grasslands. Thus, our findings revealed the importance of including changes in soil surface albedo in studies assessing the net climate change mitigation potential of biochar, and we discuss the urgent need for field studies and more detailed spatiotemporal modelling. (letter)

Assimilation of SMOS Brightness Temperatures or Soil Moisture Retrievals into a Land Surface Model

Science.gov (United States)

De Lannoy, Gabrielle J. M.; Reichle, Rolf H.

2016-01-01

Three different data products from the Soil Moisture Ocean Salinity (SMOS) mission are assimilated separately into the Goddard Earth Observing System Model, version 5 (GEOS-5) to improve estimates of surface and root-zone soil moisture. The first product consists of multi-angle, dual-polarization brightness temperature (Tb) observations at the bottom of the atmosphere extracted from Level 1 data. The second product is a derived SMOS Tb product that mimics the data at a 40 degree incidence angle from the Soil Moisture Active Passive (SMAP) mission. The third product is the operational SMOS Level 2 surface soil moisture (SM) retrieval product. The assimilation system uses a spatially distributed ensemble Kalman filter (EnKF) with seasonally varying climatological bias mitigation for Tb assimilation, whereas a time-invariant cumulative density function matching is used for SM retrieval assimilation. All assimilation experiments improve the soil moisture estimates compared to model-only simulations in terms of unbiased root-mean-square differences and anomaly correlations during the period from 1 July 2010 to 1 May 2015 and for 187 sites across the US. Especially in areas where the satellite data are most sensitive to surface soil moisture, large skill improvements (e.g., an increase in the anomaly correlation by 0.1) are found in the surface soil moisture. The domain-average surface and root-zone skill metrics are similar among the various assimilation experiments, but large differences in skill are found locally. The observation-minus-forecast residuals and analysis increments reveal large differences in how the observations add value in the Tb and SM retrieval assimilation systems. The distinct patterns of these diagnostics in the two systems reflect observation and model errors patterns that are not well captured in the assigned EnKF error parameters. Consequently, a localized optimization of the EnKF error parameters is needed to further improve Tb or SM retrieval

Polyphasic approach to characterize heterotrophic bacteria of biofilms and patina on walls of the Suburban Bath of the Herculaneum's archaeological excavations in Italy

Science.gov (United States)

Ventorino, V.; Pepe, O.; Sannino, L.; Blaiotta, G.; Palomba, S.

2012-04-01

Built between the walls of Herculaneum excavations, one of the world's most important archaeological sites, and the sea in the early 1st cent. AD, the Suburban Bath is one of the best thermal complexes better preserved in ancient times. The entrance opens onto a large courtyard that leads into a hallway well lit by a skylight, impluvium, with a portrait of "Apollo". From this room you can access various parts of the thermae, all beautifully preserved. A single room, mostly occupied by the pool, serving both apodyterium (dressing room) that frigidarium. Among tepidarium and frigidarium there's a room elegantly decorated with stucco and marble. The vestibule opens to the right, through a corridor, onto a waiting room with a floor in signinum opus and into a praefurnium (oven for heating). A large pool of tepidarium, connected with laconicum, a small circular room for the baths sweat, is also present. The calidarium, as usual, has a small tank for hot water and a basin for washing in cold water. Behind the calidarium is the praefurnium, an environment with the boiler for heating the bath. Although the suburban baths are well preserved, unfortunately in you can observe the development of visible microbial coatings. During the biodeterioration process, secondary colonization of wall is due to heterotrophic bacteria and fungi that induce deterioration cause structural as well as aesthetic damage such as the discoloration of materials, the formation of crusts on surfaces and the loss of material. This investigation was carried out sampling the surfaces of walls of different rooms in the Suburban Thermae according to Italian legal procedures. Depending on the samples typology, sampling was carry out using sterile nitrocellulose membranes pressed on the surface of the walls, sterile swabs or with sterile tweezers by tearing out surface material. The samples were suspended in physiological solution and immediately refrigerated until analysis. Isolated colonies grown on PCA

The influence of vertical sorbed phase transport on the fate of organic chemicals in surface soils.

Science.gov (United States)

McLachlan, Michael S; Czub, Gertje; Wania, Frank

2002-11-15

Gaseous exchange between surface soil and the atmosphere is an important process in the environmental fate of many chemicals. It was hypothesized that this process is influenced by vertical transport of chemicals sorbed to soil particles. Vertical sorbed phase transport in surface soils occurs by many processes such as bioturbation, cryoturbation, and erosion into cracks formed by soil drying. The solution of the advection/diffusion equation proposed by Jury et al. to describe organic chemical fate in a uniformly contaminated surface soil was modified to include vertical sorbed phase transport This process was modeled using a sorbed phase diffusion coefficient, the value of which was derived from soil carbon mass balances in the literature. The effective diffusivity of the chemical in a typical soil was greater in the modified model than in the model without sorbed phase transport for compounds with log K(OW) > 2 and log K(OA) > 6. Within this chemical partitioning space, the rate of volatilization from the surface soil was larger in the modified model than in the original model by up to a factor of 65. The volatilization rate was insensitive to the value of the sorbed phase diffusion coefficient throughout much of this chemical partitioning space, indicating that the surface soil layer was essentially well-mixed and that the mass transfer coefficient was determined by diffusion through the atmospheric boundary layer only. When this process was included in a non-steady-state regional multimedia chemical fate model running with a generic emissions scenario to air, the predicted soil concentrations increased by upto a factor of 25,whilethe air concentrations decreased by as much as a factor of approximately 3. Vertical sorbed phase transport in the soil thus has a major impact on predicted air and soil concentrations, the state of equilibrium, and the direction and magnitude of the chemical flux between air and soil. It is a key process influencing the environmental

Analysis of factors controlling soil phosphorus loss with surface runoff in Huihe National Nature Reserve by principal component and path analysis methods.

Science.gov (United States)

He, Jing; Su, Derong; Lv, Shihai; Diao, Zhaoyan; Bu, He; Wo, Qiang

2018-01-01

Phosphorus (P) loss with surface runoff accounts for the P input to and acceleration of eutrophication of the freshwater. Many studies have focused on factors affecting P loss with surface runoff from soils, but rarely on the relationship among these factors. In the present study, rainfall simulation on P loss with surface runoff was conducted in Huihe National Nature Reserve, in Hulunbeier grassland, China, and the relationships between P loss with surface runoff, soil properties, and rainfall conditions were examined. Principal component analysis and path analysis were used to analyze the direct and indirect effects on P loss with surface runoff. The results showed that P loss with surface runoff was closely correlated with soil electrical conductivity, soil pH, soil Olsen P, soil total nitrogen (TN), soil total phosphorus (TP), and soil organic carbon (SOC). The main driving factors which influenced P loss with surface runoff were soil TN, soil pH, soil Olsen P, and soil water content. Path analysis and determination coefficient analysis indicated that the standard multiple regression equation for P loss with surface runoff and each main factor was Y = 7.429 - 0.439 soil TN - 6.834 soil pH + 1.721 soil Olsen-P + 0.183 soil water content (r = 0.487, p runoff. The effect of physical and chemical properties of undisturbed soils on P loss with surface runoff was discussed, and the soil water content and soil Olsen P were strongly positive influences on the P loss with surface runoff.

Assimilation of ASCAT near-surface soil moisture into the SIM hydrological model over France

Science.gov (United States)

Draper, C.; Mahfouf, J.-F.; Calvet, J.-C.; Martin, E.; Wagner, W.

2011-12-01

This study examines whether the assimilation of remotely sensed near-surface soil moisture observations might benefit an operational hydrological model, specifically Météo-France's SAFRAN-ISBA-MODCOU (SIM) model. Soil moisture data derived from ASCAT backscatter observations are assimilated into SIM using a Simplified Extended Kalman Filter (SEKF) over 3.5 years. The benefit of the assimilation is tested by comparison to a delayed cut-off version of SIM, in which the land surface is forced with more accurate atmospheric analyses, due to the availability of additional atmospheric observations after the near-real time data cut-off. However, comparing the near-real time and delayed cut-off SIM models revealed that the main difference between them is a dry bias in the near-real time precipitation forcing, which resulted in a dry bias in the root-zone soil moisture and associated surface moisture flux forecasts. While assimilating the ASCAT data did reduce the root-zone soil moisture dry bias (by nearly 50%), this was more likely due to a bias within the SEKF, than due to the assimilation having accurately responded to the precipitation errors. Several improvements to the assimilation are identified to address this, and a bias-aware strategy is suggested for explicitly correcting the model bias. However, in this experiment the moisture added by the SEKF was quickly lost from the model surface due to the enhanced surface fluxes (particularly drainage) induced by the wetter soil moisture states. Consequently, by the end of each winter, during which frozen conditions prevent the ASCAT data from being assimilated, the model land surface had returned to its original (dry-biased) climate. This highlights that it would be more effective to address the precipitation bias directly, than to correct it by constraining the model soil moisture through data assimilation.

Global spatiotemporal distribution of soil respiration modeled using a global database

Science.gov (United States)

Hashimoto, S.; Carvalhais, N.; Ito, A.; Migliavacca, M.; Nishina, K.; Reichstein, M.

2015-07-01

The flux of carbon dioxide from the soil to the atmosphere (soil respiration) is one of the major fluxes in the global carbon cycle. At present, the accumulated field observation data cover a wide range of geographical locations and climate conditions. However, there are still large uncertainties in the magnitude and spatiotemporal variation of global soil respiration. Using a global soil respiration data set, we developed a climate-driven model of soil respiration by modifying and updating Raich's model, and the global spatiotemporal distribution of soil respiration was examined using this model. The model was applied at a spatial resolution of 0.5°and a monthly time step. Soil respiration was divided into the heterotrophic and autotrophic components of respiration using an empirical model. The estimated mean annual global soil respiration was 91 Pg C yr-1 (between 1965 and 2012; Monte Carlo 95 % confidence interval: 87-95 Pg C yr-1) and increased at the rate of 0.09 Pg C yr-2. The contribution of soil respiration from boreal regions to the total increase in global soil respiration was on the same order of magnitude as that of tropical and temperate regions, despite a lower absolute magnitude of soil respiration in boreal regions. The estimated annual global heterotrophic respiration and global autotrophic respiration were 51 and 40 Pg C yr-1, respectively. The global soil respiration responded to the increase in air temperature at the rate of 3.3 Pg C yr-1 °C-1, and Q10 = 1.4. Our study scaled up observed soil respiration values from field measurements to estimate global soil respiration and provide a data-oriented estimate of global soil respiration. The estimates are based on a semi-empirical model parameterized with over one thousand data points. Our analysis indicates that the climate controls on soil respiration may translate into an increasing trend in global soil respiration and our analysis emphasizes the relevance of the soil carbon flux from soil to

Assessment of soil compaction properties based on surface wave techniques

Science.gov (United States)

Jihan Syamimi Jafri, Nur; Rahim, Mohd Asri Ab; Zahid, Mohd Zulham Affandi Mohd; Faizah Bawadi, Nor; Munsif Ahmad, Muhammad; Faizal Mansor, Ahmad; Omar, Wan Mohd Sabki Wan

2018-03-01

Soil compaction plays an important role in every construction activities to reduce risks of any damage. Traditionally, methods of assessing compaction include field tests and invasive penetration tests for compacted areas have great limitations, which caused time-consuming in evaluating large areas. Thus, this study proposed the possibility of using non-invasive surface wave method like Multi-channel Analysis of Surface Wave (MASW) as a useful tool for assessing soil compaction. The aim of this study was to determine the shear wave velocity profiles and field density of compacted soils under varying compaction efforts by using MASW method. Pre and post compaction of MASW survey were conducted at Pauh Campus, UniMAP after applying rolling compaction with variation of passes (2, 6 and 10). Each seismic data was recorded by GEODE seismograph. Sand replacement test was conducted for each survey line to obtain the field density data. All seismic data were processed using SeisImager/SW software. The results show the shear wave velocity profiles increase with the number of passes from 0 to 6 passes, but decrease after 10 passes. This method could attract the interest of geotechnical community, as it can be an alternative tool to the standard test for assessing of soil compaction in the field operation.

Role of subsurface physics in the assimilation of surface soil moisture observations

Science.gov (United States)

Soil moisture controls the exchange of water and energy between the land surface and the atmosphere and exhibits memory that may be useful for climate prediction at monthly time scales. Though spatially distributed observations of soil moisture are increasingly becoming available from remotely sense...

Putative N₂-fixing heterotrophic bacteria associated with dinoflagellate-Cyanobacteria consortia in the low-nitrogen Indian Ocean

DEFF Research Database (Denmark)

Farnelid, H.; Tarangkoon, Woraporn; Hansen, Gert

2010-01-01

that the symbionts fix gaseous nitrogen (N2). Individual heterotrophic dinoflagellates containing cyanobacterial symbionts were isolated from the open Indian Ocean and off Western Australia, and characterized using light microscopy, transmission electron microscopy (TEM), and nitrogenase (nifH) gene amplification......, cloning, and sequencing. Cyanobacteria, heterotrophic bacteria and eukaryotic algae were recognized as symbionts of the heterotrophic dinoflagellates. nifH gene sequences were obtained from 23 of 37 (62%) specimens of dinoflagellates (Ornithocercus spp. and Amphisolenia spp.). Interestingly, only 2...... specimens contained cyanobacterial nifH sequences, while 21 specimens contained nifH genes related to heterotrophic bacteria. Of the 137 nifH sequences obtained 68% were most similar to Alpha-, Beta-, and Gammaproteobacteria, 8% clustered with anaerobic bacteria, and 5% were related to second alternative...

Optimization of sampling for the determination of the mean Radium-226 concentration in surface soil

International Nuclear Information System (INIS)

Williams, L.R.; Leggett, R.W.; Espegren, M.L.; Little, C.A.

1987-08-01

This report describes a field experiment that identifies an optimal method for determination of compliance with the US Environmental Protection Agency's Ra-226 guidelines for soil. The primary goals were to establish practical levels of accuracy and precision in estimating the mean Ra-226 concentration of surface soil in a small contaminated region; to obtain empirical information on composite vs. individual soil sampling and on random vs. uniformly spaced sampling; and to examine the practicality of using gamma measurements in predicting the average surface radium concentration and in estimating the number of soil samples required to obtain a given level of accuracy and precision. Numerous soil samples were collected on each six sites known to be contaminated with uranium mill tailings. Three types of samples were collected on each site: 10-composite samples, 20-composite samples, and individual or post hole samples; 10-composite sampling is the method of choice because it yields a given level of accuracy and precision for the least cost. Gamma measurements can be used to reduce surface soil sampling on some sites. 2 refs., 5 figs., 7 tabs

Heterotrophic bacterial production and metabolic balance during the VAHINE mesocosm experiment in the New Caledonia lagoon

Science.gov (United States)

Van Wambeke, France; Pfreundt, Ulrike; Barani, Aude; Berthelot, Hugo; Moutin, Thierry; Rodier, Martine; Hess, Wolfgang R.; Bonnet, Sophie

2016-06-01

Studies investigating the fate of diazotrophs through the microbial food web are lacking, although N2 fixation can fuel up to 50 % of new production in some oligotrophic oceans. In particular, the role played by heterotrophic prokaryotes in this transfer is largely unknown. In the frame of the VAHINE (VAriability of vertical and tropHIc transfer of diazotroph derived N in the south wEst Pacific) experiment, three replicate large-volume (˜ 50 m3) mesocosms were deployed for 23 days in the new Caledonia lagoon and were intentionally fertilized on day 4 with dissolved inorganic phosphorus (DIP) to stimulate N2 fixation. We specifically examined relationships between heterotrophic bacterial production (BP) and N2 fixation or primary production, determined bacterial growth efficiency and established carbon budgets. BP was statistically higher during the second phase of the experiment (P2: days 15-23), when chlorophyll biomass started to increase compared to the first phase (P1: days 5-14). Phosphatase alkaline activity increased drastically during the second phase of the experiment, showing adaptations of microbial populations after utilization of the added DIP. Notably, among autotrophs, Synechococcus abundances increased during P2, possibly related to its capacity to assimilate leucine and to produce alkaline phosphatase. Bacterial growth efficiency based on the carbon budget (27-43 %), was notably higher than generally cited for oligotrophic environments and discussed in links with the presence of abundant species of bacteria expressing proteorhodopsin. The main fates of gross primary production (particulate + dissolved) were respiration (67 %) and export through sedimentation (17 %). BP was highly correlated with particulate primary production and chlorophyll biomass during both phases of the experiment but was slightly correlated, and only during P2 phase, with N2 fixation rates. Heterotrophic bacterial production was strongly stimulated after mineral N enrichment

Uranium Immobilization in Wetland Soils

Science.gov (United States)

Jaffe, Peter R.; Koster van Groos, Paul G.; Li, Dien; Chang, Hyun-Shik; Seaman, John C.; Kaplan, Daniel I.; Peacock, Aaron D.; Scheckel, Kirk

2014-05-01

In wetlands, which are a major feature at the groundwater-surface water interface, plants deliver oxygen to the subsurface to keep root tissue aerobic. Some of this oxygen leaches into the rhizosphere where it will oxidize iron that typically precipitates on or near roots. Furthermore, plans provide carbon via root exudates and turnover, which in the presence of the iron oxides drives the activity of heterotrophic iron reducers in wetland soils. Oxidized iron is an important electron acceptor for many microbially-driven transformations, which can affect the fate and transport of several pollutants. It has been shown that heterotrophic iron reducing organisms, such as Geobacter sp., can reduce water soluble U(VI) to insoluble U(IV). The goal of this study was to determine if and how iron cycling in the wetland rhizosphere affects uranium dynamics. For this purpose, we operated a series of small-scale wetland mesocosms in a greenhouse to simulate the discharge of uranium-contaminated groundwater to surface waters. The mesocosms were operated with two different Fe(II) loading rates, two plant types, and unplanted controls. The mesocosms contained zones of root exclusion to differentiate between the direct presence and absence of roots in the planted mesocosms. The mesocosms were operated for several month to get fully established, after which a U(VI) solution was fed for 80 days. The mesocosms were then sacrificed and analyzed for solid-associated chemical species, microbiological characterization, micro-X-ray florescence (µ-XRF) mapping of Fe and U on the root surface, and U speciation via X-ray Absorption Near Edge Structure (XANES). Results showed that bacterial numbers including Geobacter sp., Fe(III), as well as total uranium, were highest on roots, followed by sediments near roots, and lowest in zones without much root influence. Results from the µ-XRF mapping on root surfaces indicated a strong spatial correlation between Fe and U. This correlation was

Inference of Interactions in Cyanobacterial-Heterotrophic Co-Cultures via Transcriptome Sequencing

Energy Technology Data Exchange (ETDEWEB)

Beliaev, Alex S.; Romine, Margaret F.; Serres, Margaret; Bernstein, Hans C.; Linggi, Bryan E.; Markillie, Lye Meng; Isern, Nancy G.; Chrisler, William B.; Kucek, Leo A.; Hill, Eric A.; Pinchuk, Grigoriy; Bryant, Donald A.; Wiley, H. S.; Fredrickson, Jim K.; Konopka, Allan

2014-04-29

We employed deep sequencing technology to identify transcriptional adaptation of the euryhaline unicellular cyanobacterium Synechococcus sp. PCC 7002 and the marine facultative aerobe Shewanella putrefaciens W3-18-1 to growth in a co-culture and infer the effect of carbon flux distributions on photoautotroph-heterotroph interactions. The overall transcriptome response of both organisms to co-cultivation was shaped by their respective physiologies and growth constraints. Carbon limitation resulted in the expansion of metabolic capacities which was manifested through the transcriptional upregulation of transport and catabolic pathways. While growth coupling occurred via lactate oxidation or secretion of photosynthetically fixed carbon, there was evidence of specific metabolic interactions between the two organisms. On one hand, the production and excretion of specific amino acids (methionine and alanine) by the cyanobacterium correlated with the putative downregulation of the corresponding biosynthetic machinery of Shewanella W3-18-1. On the other hand, the broad and consistent decrease of mRNA levels for many Fe-regulated Synechococcus 7002 genes during co-cultivation suggested increased Fe availability as well as more facile and energy-efficient mechanisms for Fe acquisition by the cyanobacterium. Furthermore, evidence pointed at potentially novel interactions between oxygenic photoautotrophs and heterotrophs related to the oxidative stress response as transcriptional patterns suggested that Synechococcus 7002 rather than Shewanella W3-18-1 provided scavenging functions for reactive oxygen species under co-culture conditions. This study provides an initial insight into the complexity of photoautotrophic-heterotrophic interactions and brings new perspectives of their role in the robustness and stability of the association.

Spreading of 137 C in the Goiania urban area by resuspension and transport of surface soil

International Nuclear Information System (INIS)

Rio, Monica Pires do; Amaral, Eliana

2002-01-01

The resuspension of surface soil was considered the mechanism responsible by the spreading of 137 Cs after the Goiania accident, which affected an urban area of about 1 km 2 . Studies on the transport of 137 Cs associated to the surface soil were performed in a house located at 57 th Street, close to the main focus of contamination, from 05/89 to 07/00. Periodically, samples of surface soil and soil profile were collected at the house yards and street dust sampling at representative locations was performed in order to know the extension of the contamination in the city. The soil profile samples have shown the low mobility of 137 Cs in deep layers of the soil, although a slight long-term decrease of the 137 Cs activity concentration in the surface soil were observed. The 137 Cs activity concentration in the street dust samples also decrease with time, suggesting a natural dilution of the contamination in those samples; higher values were only found in few locations close to the foci of primary deposition and no additional spreading of the radionuclide is expected to occur from that area. Street dust sampling is a suitable method to assess the spreading of caesium in urban environment. (author)

Factors governing the pH in a heterotrophic, turbid, tidal estuary

NARCIS (Netherlands)

Hofmann, A.F.; Meysman, F.J.R.; Soetaert, K.; Middelburg, J.J.

2009-01-01

A method to quantify the influence of kinetically modelled biogeochemical processes on the pH of an ecosystem with time variable acid-base dissociation constants is presented and applied to the heterotrophic, turbid Scheldt estuary (SW Netherlands, N Belgium). Nitrification is identified as the main

Experiment Study on Determination of Surface Area of Finegrained Soils by Mercury Intrusion Porosimetry

Science.gov (United States)

Yan, X. Q.; Zhou, C. Y.; Fang, Y. G.; Lin, L. S.

2017-12-01

The specific surface area (SSA) has a great influence on the physical and chemical properties of fine-grained soils. Determination of specific surface area is an important content for fine-grained soils micro-meso analysis and characteristic research. In this paper, mercury intrusion porosimetry (MIP) was adopted to determine the SSA of fine-grained soils including quartz, kaolinite, bentonite and natural Shenzhen soft clay. The test results show that the average values of SSA obtained by MIP are 0.78m2/g, 11.31m2/g, 57.28m2/g and 27.15m2/g respectively for very fine-grained quartz, kaolin, bentonite and natural Shenzhen soft clay, and that it is feasible to apply MIP to obtain the SSA of fine-grained soils through statistical analysis of 97 samples. Through discussion, it is necessary to consider the state of fine-grained soils such as pore ratio when the SSA of fine-grained soils is determined by MIP.

Estimating surface soil erosion losses and mapping erosion risk for Yusufeli micro-catchment (Artvin

Directory of Open Access Journals (Sweden)

Mustafa Tüfekçioğlu

2016-10-01

Full Text Available Sheet erosion, one of the most important types of water erosion, takes place on the top soil as tiny soil layer movement that affects lake and stream ecosystem. This type of erosion is very important because the productive soil layer on the top soil can be lost in a very short period of time. The goal of this study was to quantify the amount of surface (sheet and rill soil erosion, and to identify areas under high erosion risk within the study area at Yusufeli province in Artvin by using RUSLE erosion methodology. As a result of the study it was found that the average annual potential soil loss by surface erosion was 3.6 ton ha-1yr-1. Additionally, the maps produced and conclusions reached by the study revealed that the areas of high erosion risk were identified spatially and measures to control erosion on some of these high risk areas can be possible with appropriate erosion control techniques.

Abundance and diversity of culturable Pseudomonas constitute sensitive indicators for adverse long-term copper impacts in soil

DEFF Research Database (Denmark)

Thorsen, Maja Kristine; Brandt, Kristian Koefoed; Nybroe, Ole

2013-01-01

heterotrophic bacteria. This indicates that the Pseudomonas population is not resilient towards copper stress and that culturable Pseudomonas spp. comprise sensitive bio-indicators of adverse copper impacts in contaminated soils. Further this study shows that copper exposure decreases bacterial diversity...

Gamma radiation fields from activity deposited on road and soil surfaces

International Nuclear Information System (INIS)

Hedemann Jensen, P.

1993-12-01

Radioactive material deposited in the environment after an accidental release would cause exposure of the population living in the affected areas. The radiation field will depend on many factors such as radionuclide composition, surface contamination density, removal of activity by weathering and migration, and protective measures like decontamination, ploughing and covering by asphalt. Methods are described for calculation of air kerma rate from deposited activity on road and soil surfaces, both from the initially deposited activity and from activity distributed in the upper layer of soil as well as from activity covered by asphalt or soil. Air kerma rates are calculated for different source geometries and the results are fitted to a power-exponential function of photon energy, depth distributions in soil and horizontal dimensions. Based on this function calculations of air kerma rate can easily be made on a personal computer or programmable pocket calculator for specific radionuclide compositions and different horizontal and vertical distributions of the deposited activity. The calculations are compared to results from other methods like the Monte Carlo method and good agreement is found between the results. (au) (7 tabs., 12 ills., 8 refs.)

Daily Based Morgan–Morgan–Finney (DMMF Model: A Spatially Distributed Conceptual Soil Erosion Model to Simulate Complex Soil Surface Configurations

Directory of Open Access Journals (Sweden)

Kwanghun Choi

2017-04-01

Full Text Available In this paper, we present the Daily based Morgan–Morgan–Finney model. The main processes in this model are based on the Morgan–Morgan–Finney soil erosion model, and it is suitable for estimating surface runoff and sediment redistribution patterns in seasonal climate regions with complex surface configurations. We achieved temporal flexibility by utilizing daily time steps, which is suitable for regions with concentrated seasonal rainfall. We introduce the proportion of impervious surface cover as a parameter to reflect its impacts on soil erosion through blocking water infiltration and protecting the soil from detachment. Also, several equations and sequences of sub-processes are modified from the previous model to better represent physical processes. From the sensitivity analysis using the Sobol’ method, the DMMF model shows the rational response to the input parameters which is consistent with the result from the previous versions. To evaluate the model performance, we applied the model to two potato fields in South Korea that had complex surface configurations using plastic covered ridges at various temporal periods during the monsoon season. Our new model shows acceptable performance for runoff and the sediment loss estimation ( NSE ≥ 0.63 , | PBIAS | ≤ 17.00 , and RSR ≤ 0.57 . Our findings demonstrate that the DMMF model is able to predict the surface runoff and sediment redistribution patterns for cropland with complex surface configurations.

Soil surface roughness: comparing old and new measuring methods and application in a soil erosion model

Science.gov (United States)

Thomsen, L. M.; Baartman, J. E. M.; Barneveld, R. J.; Starkloff, T.; Stolte, J.

2015-04-01

Quantification of soil roughness, i.e. the irregularities of the soil surface due to soil texture, aggregates, rock fragments and land management, is important as it affects surface storage, infiltration, overland flow, and ultimately sediment detachment and erosion. Roughness has been measured in the field using both contact methods (such as roller chain and pinboard) and sensor methods (such as stereophotogrammetry and terrestrial laser scanning (TLS)). A novel depth-sensing technique, originating in the gaming industry, has recently become available for earth sciences: the Xtion Pro method. Roughness data obtained using various methods are assumed to be similar; this assumption is tested in this study by comparing five different methods to measure roughness in the field on 1 m2 agricultural plots with different management (ploughing, harrowing, forest and direct seeding on stubble) in southern Norway. Subsequently, the values were used as input for the LISEM soil erosion model to test their effect on the simulated hydrograph at catchment scale. Results show that statistically significant differences between the methods were obtained only for the fields with direct seeding on stubble; for the other land management types the methods were in agreement. The spatial resolution of the contact methods was much lower than for the sensor methods (10 000 versus at least 57 000 points per square metre). In terms of costs and ease of use in the field, the Xtion Pro method is promising. Results from the LISEM model indicate that especially the roller chain overestimated the random roughness (RR) values and the model subsequently calculated less surface runoff than measured. In conclusion, the choice of measurement method for roughness data matters and depends on the required accuracy, resolution, mobility in the field and available budget. It is recommended to use only one method within one study.

Soil and water characteristics of a young surface mine wetland

Science.gov (United States)

Andrew Cole, C.; Lefebvre, Eugene A.

1991-05-01

Coal companies are reluctant to include wetland development in reclamation plans partly due to a lack of information on the resulting characteristics of such sites. It is easier for coal companies to recreate terrestrial habitats than to attempt experimental methods and possibly face significant regulatory disapproval. Therefore, we studied a young (10 years) wetland on a reclaimed surface coal mine in southern Illinois so as to ascertain soil and water characteristics such that the site might serve as a model for wetland development on surface mines. Water pH was not measured because of equipment problems, but evidence (plant life, fish, herpetofauna) suggests suitable pH levels. Other water parameters (conductivity, salinity, alkalinity, chloride, copper, total hardness, iron, manganese, nitrate, nitrite, phosphate, and sulfate) were measured, and only copper was seen in potentially high concentrations (but with no obvious toxic effects). Soil variables measured included pH, nitrate, nitrite, ammonia, potassium, calcium, magnesium, manganese, aluminum, iron, sulfate, chloride, and percent organic matter. Soils were slightly alkaline and most parameters fell within levels reported for other studies on both natural and manmade wetlands. Aluminum was high, but this might be indicative more of large amounts complexed with soils and therefore unavailable, than amounts actually accessible to plants. Organic matter was moderate, somewhat surprising given the age of the system.

Spatial Variability of Cyanobacteria and Heterotrophic Bacteria in Lake Taihu (China).

Science.gov (United States)

Qian, Haifeng; Lu, Tao; Song, Hao; Lavoie, Michel; Xu, Jiahui; Fan, Xiaoji; Pan, Xiangliang

2017-09-01

Cyanobacterial blooms frequently occur in Lake Taihu (China), but the intertwined relationships between biotic and abiotic factors modulating the frequency and duration of the blooms remain enigmatic. To better understand the relationships between the key abiotic and biotic factors and cyanobacterial blooms, we measured the abundance and diversity of prokaryotic organisms by high-throughput sequencing, the abundance of key genes involved in microcystin production and nitrogen fixation or loss as well as several physicochemical parameters at several stations in Lake Taihu during a cyanobacterial bloom of Microcystis sp.. Measurements of the copy number of denitrification-related genes and 16S rRNA analyses show that denitrification potential and denitrifying bacteria abundance increased in concert with non-diazotrophic cyanobacteria (Microcystis sp.), suggesting limited competition between cyanobacteria and heterotrophic denitrifiers for nutrients, although potential bacteria-mediated N loss may hamper Microcystis growth. The present study provides insight into the importance of different abiotic and biotic factors in controlling cyanobacteria and heterotrophic bacteria spatial variability in Lake Taihu.

LPRM/TMI/TRMM L2 Surface Soil Moisture, Ancillary Params, and QC V001

Data.gov (United States)

National Aeronautics and Space Administration — This Level 2 (swath) data set’s land surface parameters, surface soil moisture, land surface (skin) temperature, and vegetation water content, are derived from...

Oxidation of FGD-CaSO{sub 3} and effect on soil chemical properties when applied to the soil surface

Energy Technology Data Exchange (ETDEWEB)

Liming Chen; Cliff Ramsier; Jerry Bigham; Brian Slater; David Kost; Yong Bok Lee; Warren A. Dick [Ohio State University, Wooster, OH (United States). School of Environment and Natural Resources

2009-07-15

Use of high-sulfur coal for power generation in the United States requires the removal of sulfur dioxide (SO{sub 2}) produced during burning in order to meet clean air regulations. If SO{sub 2} is removed from the flue gas using a wet scrubber without forced air oxidation, much of the S product created will be sulfite (SO{sub 3}{sup 2-}). Plants take up S in the form of sulfate (SO{sub 2}{sup 2-}). Sulfite may cause damage to plant roots, especially in acid soils. For agricultural uses, it is thought that SO{sub 4}{sup 2-} in flue gas desulfurization (FGD) products must first oxidize to SO{sub 4}{sup 2-} in soils before crops are planted. However, there is little information about the oxidation of SO{sub 3}{sup 2-} in FGD product to SO{sub 4}{sup 2-} under field conditions. An FGD-CaSO{sub 3} was applied at rates of 0, 1.12, and 3.36 Mg ha{sup -1} to the surface of an agricultural soil (Wooster silt loam, Oxyaquic Fragiudalf). The SO{sub 4}{sup 2-} in the surface soil (0-10 cm) was analyzed on days 3, 7, 17, 45, and 61. The distribution of SO{sub 4}{sup 2-} and Ca in the 0-90 cm soil layer was also determined on day 61. Results indicated that SO{sub 3}{sup 2-} in the FGD-CaSO{sub 3} rapidly oxidized to SO{sub 4}{sup 2-} on the field surface during the first week and much of the SO{sub 4}{sup 2-} and Ca moved downward into the 0-50 cm soil layer during the experimental period of two months. It is safe to grow plants in soil treated with FGD-CaSO{sub 3} if the application is made at least three days to several weeks before planting. 20 refs., 6 figs., 4 tabs.

Isolation and life cycle characterization of lytic viruses infecting heterotrophic bacteria and cyanobacteria

DEFF Research Database (Denmark)

Middelboe, Mathias; Chan, Amy; Bertelsen, Sif Koldborg

2010-01-01

Basic knowledge on viruses infecting heterotrophic bacteria and cyanobacteria is key to future progress in understanding the role of viruses in aquatic systems and the influence of virus–host interactions on microbial mortality, biogeochemical cycles, and genetic exchange. Such studies require......, and discusses the applications and limitations of different isolation procedures. Most work on phage isolation has been carried out with aerobic heterotrophic bacteria and cyanobacteria, culturable both on agar plates and in enriched liquid cultures. The procedures presented here are limited to lytic viruses...... infecting such hosts. In addition to the isolation procedures, methods for life cycle characterization (one-step growth experiments) of bacteriophages and cyanophages are described. Finally, limitations and drawbacks of the proposed methods are assessed and discussed...

A comparison of different neutron probes calibration method for the soil surface and their radiation effect on the users

Energy Technology Data Exchange (ETDEWEB)

Arslan, A; Razzouk, A K; Al-Ain, F [Atomic Energy commission , Damascus (Syrian Arab Republic). Dept of Radiation Agriculture

1996-08-01

In situ calibration curves were installed for the soil surface using different models of depth neutron probes and different adaptors. depth beutron probe readings increased with increasing the number of teflon plastic blocks deposited on the soil surface. The intercept of the straight line regression analysis decreased with increasing of teflon plastics blocks deposited on the soil surface in all sites. The least exposure was with depth probe with surface reflectors. This study proves the possibility of measuring the moisture content of the soil surface by using a depth probe with a block laid on the surface, without a danger of receiving the thresgold of radiation dose. (author). 10 Refs., 2 Figs., 8 Tabs.

Effect of Space Radiation Processing on Lunar Soil Surface Chemistry: X-Ray Photoelectron Spectroscopy Studies

Science.gov (United States)

Dukes, C.; Loeffler, M.J.; Baragiola, R.; Christoffersen, R.; Keller, J.

2009-01-01

Current understanding of the chemistry and microstructure of the surfaces of lunar soil grains is dominated by a reference frame derived mainly from electron microscopy observations [e.g. 1,2]. These studies have shown that the outermost 10-100 nm of grain surfaces in mature lunar soil finest fractions have been modified by the combined effects of solar wind exposure, surface deposition of vapors and accretion of impact melt products [1,2]. These processes produce surface-correlated nanophase Feo, host grain amorphization, formation of surface patinas and other complex changes [1,2]. What is less well understood is how these changes are reflected directly at the surface, defined as the outermost 1-5 atomic monolayers, a region not easily chemically characterized by TEM. We are currently employing X-ray Photoelectron Spectroscopy (XPS) to study the surface chemistry of lunar soil samples that have been previously studied by TEM. This work includes modification of the grain surfaces by in situ irradiation with ions at solar wind energies to better understand how irradiated surfaces in lunar grains change their chemistry once exposed to ambient conditions on earth.

Lentinus (Panus) tigrinus augmentation of a historically contaminated soil: matrix decontamination and structure and function of the resident bacterial community.

Science.gov (United States)

Federici, E; Giubilei, M A; Cajthaml, T; Petruccioli, M; D'Annibale, A

2011-02-28

The ability of Lentinus tigrinus to grow and to degrade persistent aromatic hydrocarbons in aged contaminated soil was assessed in this study. L. tigrinus extensively colonized the soil; its degradation activity after 60 d incubation at 28°C, however, was mostly limited to dichloroaniline isomers, polychlorinated benzenes and diphenyl ether while the fungus was unable to deplete 9,10-anthracenedione and 7-H-benz[DE]anthracene-7-one which were the major soil contaminants. Although clean-up levels were limited, both density of cultivable heterotrophic bacteria and richness of the resident bacterial community in L. tigrinus microcosms (LtM) increased over time to a significantly larger extent than the respective amended incubation controls (1.9×10(9) CFU g(-1) vs. 1.0×10(9) CFU g(-1) and 37 vs. 16, respectively). Naphthalene- and catechol 2,3-dioxygenase gene copy numbers, however, decreased over time at a higher rate in LtM than in incubation controls likely due to a higher stimulation on heterotrophs than xenobiotics-degrading community members. Copyright © 2010 Elsevier B.V. All rights reserved.

Estimating surface turbulent heat fluxes from land surface temperature and soil moisture using the particle batch smoother

Science.gov (United States)

Lu, Yang; Dong, Jianzhi; Steele-Dunne, Susan; van de Giesen, Nick

2016-04-01

This study is focused on estimating surface sensible and latent heat fluxes from land surface temperature (LST) time series and soil moisture observations. Surface turbulent heat fluxes interact with the overlying atmosphere and play a crucial role in meteorology, hydrology and other climate-related fields, but in-situ measurements are costly and difficult. It has been demonstrated that the time series of LST contains information of energy partitioning and that surface turbulent heat fluxes can be determined from assimilation of LST. These studies are mainly based on two assumptions: (1) a monthly value of bulk heat transfer coefficient under neutral conditions (CHN) which scales the sum of the fluxes, and (2) an evaporation fraction (EF) which stays constant during the near-peak hours of the day. Previous studies have applied variational and ensemble approaches to this problem. Here the newly developed particle batch smoother (PBS) algorithm is adopted to test its capability in this application. The PBS can be seen as an extension of the standard particle filter (PF) in which the states and parameters within a fix window are updated in a batch using all observations in the window. The aim of this study is two-fold. First, the PBS is used to assimilate only LST time series into the force-restore model to estimate fluxes. Second, a simple soil water transfer scheme is introduced to evaluate the benefit of assimilating soil moisture observations simultaneously. The experiments are implemented using the First ISLSCP (International Satellite Land Surface Climatology Project) (FIFE) data. It is shown that the restored LST time series using PBS agrees very well with observations, and that assimilating LST significantly improved the flux estimation at both daily and half-hourly time scales. When soil moisture is introduced to further constrain EF, the accuracy of estimated EF is greatly improved. Furthermore, the RMSEs of retrieved fluxes are effectively reduced at both

Pollution distribution of heavy metals in surface soil at an informal electronic-waste recycling site.

Science.gov (United States)

Fujimori, Takashi; Takigami, Hidetaka

2014-02-01

We studied distribution of heavy metals [lead (Pb), copper (Cu) and zinc (Zn)] in surface soil at an electronic-waste (e-waste) recycling workshop near Metro Manila in the Philippines to evaluate the pollution size (spot size, small area or the entire workshop), as well as to assess heavy metal transport into the surrounding soil environment. On-site length-of-stride-scale (~70 cm) measurements were performed at each surface soil point using field-portable X-ray fluorescence (FP-XRF). The surface soil at the e-waste recycling workshop was polluted with Cu, Zn and Pb, which were distributed discretely in surface soil. The site was divided into five areas based on the distance from an entrance gate (y-axis) of the e-waste recycling workshop. The three heavy metals showed similar concentration gradients in the y-axis direction. Zn, Pb and Cu concentrations were estimated to decrease to half of their maximum concentrations at ~3, 7 and 7 m from the pollution spot, respectively, inside the informal e-waste recycling workshop. Distance from an entrance may play an important role in heavy metal transport at the soil surface. Using on-site FP-XRF, we evaluated the metal ratio to characterise pollution features of the solid surface. Variability analysis of heavy metals revealed vanishing surficial autocorrelation over metre ranges. Also, the possibility of concentration prediction at unmeasured points using geostatistical kriging was evaluated, and heavy metals had a relative "small" pollution scales and remained inside the original workshop compared with toxic organohalogen compounds. Thus, exposure to heavy metals may directly influence the health of e-waste workers at the original site rather than the surrounding habitat and environmental media.

Detecting buried radium contamination using soil-gas and surface-flux radon meaurements

International Nuclear Information System (INIS)

Karp, K.E.

1988-06-01

The Technical Measurements Center (TMC) has investigated the effectiveness of using radon soil-gas under surface-flux measurments to locate radium contamination that is buried sufficiently deep to be undetectable by surface gamma methods. At the first test site studied, an indication of a buried source was revealed by mapping anomalous surface-flux and soil-gas concentrations in the near surface overburden. The mapped radon anomalies were found to correspond in rough outline to the shape of the areal extent of the deposit as determined by borehole gamma-ray logs. The 5.9pCi/g radium deposit, buried 2 feet below the surface, went undetected by conventional surface gamma measurements. Similar results were obtained at the second test site where radon and conventional surface gamma measurements were taken in an area having radium concentrations ranging from 13.3 to 341.0 pCi/g at a depth of 4 feet below the surface. The radon methods were found to have a detection limit for buried radium lower than that of the surface gamma methods, as evidenced by the discovery of the 13.3 pCi/g deposit which went undetected by the surface gamma methods. 15 refs., 33 figs., 8 tabs

Studies on mangrove swamps of Goa 1. Heterotrophic bacterial flora from mangrove swamps

Digital Repository Service at National Institute of Oceanography (India)

Matondkar, S.G.P; Mathani, S; Mavinkurve, S

Heterotrophic bacterial flora from the mangrove swamps of Goa consisted of physiologically active organisms exhibiting cellulolytic, pectinolytic, amylolytic, proteolytic and H2S forming activities, throughout the year. Coryneform and Bacillus were...

[Distribution and sources of oxygen and sulfur heterocyclic aromatic compounds in surface soil of Beijing, China].

Science.gov (United States)

He, Guang-Xiu; Zhang, Zhi-Huan; Peng, Xu-Yang; Zhu, Lei; Lu, Ling

2011-11-01

62 surface soil samples were collected from different environmental function zones in Beijing. Sulfur and oxygen heterocyclic aromatic compounds were detected by GC/MS. The objectives of this study were to identify the composition and distribution of these compounds, and discuss their sources. The results showed that the oxygen and sulfur heterocyclic aromatic compounds in the surface soils mainly contained dibenzofuran, methyl- and C2-dibenzofuran series, dibenzothiophene, methyl-, C2- and C3-dibenzothiophene series and benzonaphthothiophene series. The composition and distribution of the oxygen and sulfur heterocyclic aromatic compounds in the surface soil samples varied in the different environmental function zones, of which some factories and the urban area received oxygen and sulfur heterocyclic aromatic compounds most seriously. In Beijing, the degree of contamination by oxygen and sulfur heterocyclic aromatic compounds in the north surface soil was higher than that in the south. There were preferable linear correlations between the concentration of dibenzofuran series and fluorene series, as well as the concentration of dibenzothiophene series and dibenzofuran series. The oxygen and sulfur heterocyclic aromatic compounds in the surface soil were mainly derived from combustion products of oil and coal and direct input of mineral oil, etc. There were some variations in pollution sources of different environmental function zones.

The synergetic effect of moisture protection, substrate quality and biotic acclimation on soil organic carbon persistence along a cultivated loamy hillslope

Science.gov (United States)

Wiaux, François; Vanclooster, Marnik; Cornelis, Jean-Thomas; Van Oost, Kristof

2014-05-01

The combination of hydrologic, geomorphic and biogeochemical approaches is required to determine organic carbon (OC) persistence and dynamics within landscapes. Here, we used soil in-situ surface heterotrophic respiration measurement as an indicator of OC persistence along a hillslope (crop field on the loess belt under temperate climate), characterized by an important erosion-induced OC stock colluvium downslope. Along this topographical gradient, we quantified the space-time structure of soil water and temperature, and soil OC amount and quality (from a chemical point of view based on NaOCl oxidation) in relation to CO2 fluxes. We used a Generalized Least Square (GLS) regression model to identify the role of each abiotic factor as well as their interactions on observed soil respiration rates, and to calculate time-average values of these CO2 fluxes at each studied slope positions. We observed significant differences between the observed respiration rates along the topographical gradient (up to 30% more CO2 emissions downslope and 50% backslope, relative to un-eroded summit position). Despite mean CO2 fluxes (standardized at 15°C) at the bottom of the slope are significantly higher (ppedo-climatic ecosystem would be changed.

Upper-soil moisture inter-comparison from SMOS's products and land surface models over the Iberian Peninsula

Science.gov (United States)

Polcher, Jan; Barella-Ortiz, Anaïs; Aires, Filipe; Balsamo, Gianpaolo; Gelati, Emiliano; Rodríguez-Fernández, Nemesio

2015-04-01

Soil moisture is a key state variable of the hydrological cycle. It conditions runoff, infiltration and evaporation over continental surfaces, and is key for forecasting droughts and floods. It plays thus an important role in surface-atmosphere interactions. Surface Soil Moisture (SSM) can be measured by in situ measurements, by satellite observations or modelled using land surface models. As a complementary tool, data assimilation can be used to combine both modelling and satellite observations. The work presented here is an inter-comparison of retrieved and modelled SSM data, for the 2010 - 2012 period, over the Iberian Peninsula. The region has been chosen because its vegetation cover is not very dense and includes strong contrasts in the rainfall regimes and thus a diversity of behaviours for SSM. Furthermore this semi-arid region is strongly dependent on a good management of its water resources. Satellite observations correspond to the Soil Moisture and Ocean Salinity (SMOS) retrievals: the L2 product from an optimal interpolation retrieval, and 3 other products using Neural Network retrievals with different input information: SMOS time indexes, purely SMOS data, or addition of the European Advanced Scaterometer (ASCAT) backscattering, and the Moderate-Resolution Imaging Spectrometer (MODIS) surface temperature information. The modelled soil moistures have been taken from the ORCHIDEE (ORganising Carbon and Hydrology In Dynamic EcosystEms) and the HTESSEL (Hydrology-Tiled ECMWF Scheme for Surface Exchanges over Land) land surface models. Both models are forced with the same atmospheric conditions (as part of the Earth2Observe FP7 project) over the period but they represent the surface soil moisture with very different degrees of complexity. ORCHIDEE has 5 levels in the top 5 centimetres of soil while in HTESSEL this variable is part of the top soil moisture level. The two types of SMOS retrievals are compared to the model outputs in their spatial and temporal

Variability in soil CO2 production and surface CO2 efflux across riparian-hillslope transitions

Science.gov (United States)

Vincent Jerald. Pacific

2007-01-01

The spatial and temporal controls on soil CO2 production and surface CO2 efflux have been identified as an outstanding gap in our understanding of carbon cycling. I investigated both the spatial and temporal variability of soil CO2 concentrations and surface CO2 efflux across eight topographically distinct riparian-hillslope transitions in the ~300 ha subalpine upper-...

Trophic interactions among the heterotrophic components of plankton in man-made peat pools

Directory of Open Access Journals (Sweden)

Michał Niedźwiecki

2017-03-01

Full Text Available Man-made peat pools are permanent freshwater habitats developed due to non-commercial man-made peat extraction. Yet, they have not been widely surveyed in terms of ecosystem functioning, mainly regarding the complexity of heterotrophic components of the plankton. In this study we analysed distribution and trophic interrelations among heterotrophic plankton in man-made peat pools located in different types of peatbogs. We found that peat pools showed extreme differences in environmental conditions that occurred to be important drivers of distribution of microplankton and metazooplankton. Abundance of bacteria and protozoa showed significant differences, whereas metazooplankton was less differentiated in density among peat pools. In all peat pools stress-tolerant species of protozoa and metazoa were dominant. In each peat pool five trophic functional groups were distinguished. The abundance of lower functional trophic groups (bacteria, heterotrophic nanoflagellates (HNF and ciliates feeding on bacteria and HNF was weakly influenced by environmental drivers and was highly stable in all peat pool types. Higher functional trophic groups (naupli, omnivorous and carnivorous ciliates, cladocerans, adult copepods and copepodites were strongly influenced by environmental variables and exhibited lower stability. Our study contributes to comprehensive knowledge of the functioning of peat bogs, as our results have shown that peat pools are characterized by high stability of the lowest trophic levels, which can be crucial for energy transfer and carbon flux through food webs.

Impacts of Triclosan in Grey water on Soil Microorganisms

International Nuclear Information System (INIS)

Harrow, D.I; Felker, J.M; Baker, K.H

2011-01-01

The use of grey water for irrigation is becoming a common practice in arid regions such as the Southwestern US, the Middle East, Australia, and China. While grey water supplies nutrients to soil ecosystems, the possible impact of trace contaminants, particularly pharmaceuticals and personal care products, has not been determined. This paper examined the impact of triclosan, an antibacterial agent commonly added to consumer products, on microbial populations and microbial diversity in soil irrigated with grey water. While there was no change in the total number of heterotrophic microorganisms in the soil, both the types and the antibiotic resistance of the microorganisms were significantly influenced by triclosan. The proportion of the microbial isolates resistant to antibiotics increased while at the same time, overall diversity of the microbial community decreased.

Seasonal dynamics of soil CO2 efflux and soil profile CO2 concentrations in arboretum of Moscow botanical garden

Science.gov (United States)

Goncharova, Olga; Udovenko, Maria; Matyshak, Georgy

2016-04-01

To analyse and predict recent and future climate change on a global scale exchange processes of greenhouse gases - primarily carbon dioxide - over various ecosystems are of rising interest. In order to upscale land-use dependent sources and sinks of CO2, knowledge of the local variability of carbon fluxes is needed. Among terrestrial ecosystems, urban areas play an important role because most of anthropogenic emissions of carbon dioxide originate from these areas. On the other hand, urban soils have the potential to store large amounts of soil organic carbon and, thus, contribute to mitigating increases in atmospheric CO2 concentrations. Research objectives: 1) estimate the seasonal dynamics of carbon dioxide production (emission - closed chamber technique and profile concentration - soil air sampling tubes method) by soils of Moscow State University Botanical Garden Arboretum planted with Picea obovata and Pinus sylvestris, 1) identification the factors that control CO2 production. The study was conducted with 1-2 weeks intervals between October 2013 and November 2015 at two sites. Carbon dioxide soil surface efflux during the year ranged from 0 to 800 mgCO2/(m2hr). Efflux values above 0 mgCO2/(m2hr) was observed during the all cold period except for only 3 weeks. Soil CO2 concentration ranged from 1600-3000 ppm in upper 10-cm layer to 10000-40000 ppm at a depth of 60 cm. The maximum concentrations of CO2 were recorded in late winter and late summer. We associate it with high biological activity (both heterotrophic and autotrophic) during the summer, and with physical gas jamming in the winter. The high value of annual CO2 production of the studied soils is caused by high organic matter content, slightly alkaline reaction, good structure and texture of urban soils. Differences in soil CO2 production by spruce and pine urban forest soils (in the pine forest 1.5-2.0 times higher) are caused by urban soil profiles construction, but not temperature regimes. Seasonal

Nonlinear estimation of weathering rate parameters for uranium in surface soil near a nuclear facility

International Nuclear Information System (INIS)

Killough, G.G.; Rope, S.K.; Shleien, B.; Voilleque, P.G.

1999-01-01

A dynamic mass-balance model has been calibrated by a nonlinear parameter estimation method, using time-series measurements of uranium in surface soil near the former Feed Materials Production Center (FMPC) near Fernald, Ohio, USA. The time-series data, taken at six locations near the site boundary since 1971, show a statistically significant downtrend of above-background uranium concentration in surface soil for all six locations. The dynamic model is based on first-order kinetics in a surface-soil compartment 10 cm in depth. Median estimates of weathering rate coefficients for insoluble uranium in this soil compartment range from about 0.065-0.14 year -1 , corresponding to mean transit times of about 7-15 years, depending on the location sampled. The model, calibrated by methods similar to those discussed in this paper, has been used to simulate surface soil kinetics of uranium for a dose reconstruction study. It was also applied, along with other data, to make confirmatory estimates of airborne releases of uranium from the FMPC between 1951 and 1988. Two soil-column models (one diffusive and one advective, the latter similar to a catenary first-order kinetic box model) were calibrated to profile data taken at one of the six locations in 1976. The temporal predictions of the advective model approximate the trend of the time series data for that location. (Copyright (c) 1999 Elsevier Science B.V., Amsterdam. All rights reserved.)

The influence of rolled erosion control systems on soil temperature and surface albedo: part I. A greenhouse experiment

International Nuclear Information System (INIS)

Sutherland, R.A.; Menard, T.; Perry, J.L.; Penn, D.C.

1998-01-01

A greenhouse study examined the influences of various surface covers (a bare control soil and seven rolled erosion control systems—RECS) on surface radiative properties, and soil temperature. In our companion paper we examine relationships with soil moisture, biomass production, and nutrient assimilation. Randomization and replication were key components to our study of microclimate under tropical radiation conditions. The bare Oxisol control soil exhibited the most extreme microclimatic conditions with the lowest albedo (not significantly different from that of P300© North American Green, a dark green polypropylene system), and the highest mean and maximum hourly temperatures recorded at depths of 5 and 8 cm. This hostile climatic environment was not conducive to biomass production or moisture storage and it is likely that the observed soil surface crusts impeded plant emergence. Rolled erosion control systems, on the other hand, generally moderated soil temperatures by reflecting more shortwave radiation, implying less heat energy at the surface for conduction to the soil. The result was that RECS exhibited lower mean soil temperatures, higher minimum temperatures and lower maximum soil temperatures. An aspen excelsior system (Curlex I© Excelsior) had the highest albedo and the soil beneath this system exhibited the greatest temperature modulation. Open-weave systems composed of jute (Geojute© Price & Pictures) and coconut fibers (BioD-Mat 70© RoLanka) were the RECS most similar in temperature response to the bare control soil. Other systems examined were intermediate in their temperature response and surface albedo (i.e., SC150BN© North American Green, C125© North American Green and Futerra© Conwed Fibers). (author)

Seasonal variability in soil-surface CO{sub 2} efflux in selected young tree plantations in semi-arid eco-climate of Madurai

Energy Technology Data Exchange (ETDEWEB)

Saraswathi, S.G.; Lalrammawia, C.; Paliwal, K. [Madurai Kamaraj Univ., Madurai (India). Dept. of Plant Sciences

2008-07-10

Atmospheric CO{sub 2} concentrations have been increasing in response to the disruption of the global carbon cycle by anthropogenic activities such as deforestation, agricultural practices and burning of fossil fuels. This has resulted in large shifts among carbon pools. The efflux of CO{sub 2} from soil results from the combined rates of autotrophic (root) and heterotrophic (microbial and soil fauna) respiration. It is often called soil respiration. The response of soil respiration (SR) to varying soil temperature and soil moisture was studied in three year-old plantation sites of Dalbergia sissoo, Dalbergia latifolia, Albizia lebbeck, Hardwickia binata and Cassia siamea during 2005--06. Significant seasonal differences in SR rates were observed in each site (P {<=} 0.001). The highest rates of soil CO{sub 2} efflux were generally found during the rainy season and the lowest during summer in all the study sites. Highest SR rates were found in D. sissoo, 9.89 {+-} 0.78 {mu}mol m{sup -2} s{sup -1} in November and December, followed by H. binata, 9.68 {+-} 0.45 {mu}mol m{sup -2} s{sup -1} in September and October 2005, A. lebbeck, 8.84 {+-} 0.43 {mu}mol m{sup -2} s{sup -1} between November 2005 and January 2006, D. latifolia, 7.6 {+-} 0.12 {mu}mol m{sup -2} s{sup -1} in November and December 2005 and C. siamea, 7.3 {mu}mol m{sup -2} s{sup -1} in December 2005. There was a positive and significant (P {<=} 0.001) relationship between SR rates and soil moisture in all the sites (r{sup 2} above 0.60), except C. siamea (r{sup 2} = 0.30). A poor relationship was observed between SR and soil temperature in all the sites (r{sup 2} below 0.2). Examination of the seasonal pattern of SR rates suggests that much of the variability could be attributed to variations in soil moisture. There was a strong indication suggesting that the soil-water deficits served to reduce SR rates during summer and after subsequent rain events. Overall sensitivity of SR rate to soil moisture seems to

[Influence of different types of surface on the diversity of soil fauna in Beijing Olympic Park].

Science.gov (United States)

Song, Ying-shi; Li, Xiao-wen; Li, Feng; Li, Hai-mei

2015-04-01

Soil fauna are impacted by urbanization. In order to explore the stress of different surface covers on diversity and community structure of soil fauna, we conducted this experiment in Beijing Olympic Park. In autumn of 2013, we used Baermann and Tullgren methods to study the diversity of soil fauna in the depth of 0-5 cm, 5-10 cm, 10-15 cm under four different land covers i.e. bared field (BF), totally impervious surface (TIS), partly impervious surface (PIS) and grassland (GL). The results showed that the total number of soil fauna in 100 cm3 was in order of GL (210) > PIS (193) > TIS (183) > BF (90), and the number of nematodes accounted for 72.0%-92.8% of the total number. On the vertical level, except for the TIS, the other three types of surface soil fauna had the surface gathered phenomenon. The Shannon diversity index and the Pielou evenness index of BF were lower, but the Simpson dominance index was higher than in the other land covers. The Shannon index and Margalef richness indes of GL were higher than those of the other land covers. The Shannon indexes of TIS and PIS were between the BF and GL. Except for the TIS and GL, the similarity indexes were between 0.4-0.5, indicating moderate non-similar characteristics. The diversity of soil fauna was significantly correlated with temperature, pH and available potassium.

Radiative warming of the air observed near a bare-soil surface on calm clear nights

International Nuclear Information System (INIS)

Sang, N.; Kobayahsi, T.

1999-01-01

The radiative flux in the lowest three meters above a bare-soil surface was directly measured on calm nights with little cloud cover. Although divergence of upward radiative flux occurred above 1m, convergence was often observed between 0.2m and 1m all through the night. Almost the same results were obtained for the net flux except that the transitional height between divergence and convergence was some tens of centimeters, which means that radiative warming occurred just above the bare-soil surface during the night. This phenomenon can be explained by postulating that cold air is produced by conduction at the surface of small heat-insulated projections (HIPs) such as soil grains on the ground surface, while the ground releases the heat stored during the day by radiation through the pores between HIPs and warms the air immediately above the surface at night. This “HIP hypothesis” can also account for the so-called “raised minimum (RM)” phenomenon. (author)

Uptake, Accumulation and Toxicity of Silver Nanoparticle in Autotrophic Plants, and Heterotrophic Microbes: A Concentric Review

Science.gov (United States)

Tripathi, Durgesh K.; Tripathi, Ashutosh; Shweta; Singh, Swati; Singh, Yashwant; Vishwakarma, Kanchan; Yadav, Gaurav; Sharma, Shivesh; Singh, Vivek K.; Mishra, Rohit K.; Upadhyay, R. G.; Dubey, Nawal K.; Lee, Yonghoon; Chauhan, Devendra K.

2017-01-01

Nanotechnology is a cutting-edge field of science with the potential to revolutionize today’s technological advances including industrial applications. It is being utilized for the welfare of mankind; but at the same time, the unprecedented use and uncontrolled release of nanomaterials into the environment poses enormous threat to living organisms. Silver nanoparticles (AgNPs) are used in several industries and its continuous release may hamper many physiological and biochemical processes in the living organisms including autotrophs and heterotrophs. The present review gives a concentric know-how of the effects of AgNPs on the lower and higher autotrophic plants as well as on heterotrophic microbes so as to have better understanding of the differences in effects among these two groups. It also focuses on the mechanism of uptake, translocation, accumulation in the plants and microbes, and resulting toxicity as well as tolerance mechanisms by which these microorganisms are able to survive and reduce the effects of AgNPs. This review differentiates the impact of silver nanoparticles at various levels between autotrophs and heterotrophs and signifies the prevailing tolerance mechanisms. With this background, a comprehensive idea can be made with respect to the influence of AgNPs on lower and higher autotrophic plants together with heterotrophic microbes and new insights can be generated for the researchers to understand the toxicity and tolerance mechanisms of AgNPs in plants and microbes. PMID:28184215

Polychlorinated biphenyls in surface soil in urban and background areas of Mongolia

International Nuclear Information System (INIS)

Mamontova, Elena A.; Mamontov, Alexander A.; Tarasova, Eugenia N.; Kuzmin, Mikhail I.; Ganchimeg, Darmaa; Khomutova, Marina Yu.; Gombosuren, Odontuya; Ganjuurjav, Erdenebayasgalan

2013-01-01

Polychlorinated biphenyls (PCBs) were measured in soil in some industrial towns (Ulaanbaatar, Suhbaatar, Erdenet, Darhan, Tsetserleg, Hovd, Ulaangom, Altay, Bayanhongor, Arvayheer, Saynshand, Choybalsan) and in background and rural areas of Mongolia. The average sum of all investigated PCB congeners in soil of Mongolia comes to 7.4 ng/g dry weight (DW) and varies from 0.53 ng/g DW till 114 ng/g DW. PCB levels in soil from towns are significantly higher than those in soil from background and rural areas. The PCB homological composition in soil sampled in highly-PCB-polluted sites is similar to the PCB homological pattern in Sovol and Aroclor 1254. Significant correlation between soil organic carbon and low chlorinated PCB both for towns and background sites was found. Significant differences in PCB means in soil in different natural zones were found. -- Highlights: •First study to measure PCBs in surface soil sampled throughout Mongolia. •The PCB patterns in polluted soil were similar to those in Sovol or Aroclor 1254. •Significant differences in PCB means in soil in different natural zones were found. -- Polychlorinated biphenyls were measured in soils throughout Mongolia

Occurrence of heterotrophic and coliform bacteria in liquid hand soaps from bulk refillable dispensers in public facilities.

Science.gov (United States)

Chattman, Marisa; Gerba, Sheri L; Maxwell, Charles P

2011-03-01

The goal of the study discussed in this article was to determine the occurrence of heterotrophic and coliform bacteria in liquid soap from bulk refillable dispensers, obtained from restrooms in a variety of public facilities. A total of 541 samples was collected from five U.S. cities. Liquid soap from dispensers in public areas was found to contain heterotrophic and coliform bacterial numbers averaging more than 106 CFU/mL in 24.8% of the dispensers.

Persistent organic pollutants in the Tibetan surface soil: Spatial distribution, air–soil exchange and implications for global cycling

International Nuclear Information System (INIS)

Wang Xiaoping; Sheng Jiujiang; Gong Ping; Xue Yonggang; Yao Tandong; Jones, Kevin C.

2012-01-01

There are limited data on persistent organic pollutants (POPs) in the soils of the Tibetan Plateau. This paper presents data from a survey of organochlorine pesticides (OCPs), polychlorinated biphenyls (PCBs) and polybrominated diphenyl ethers (PBDEs) in 40 background surface (0–5 cm) soils of the Tibetan Plateau. Soil concentrations (pg/g, dw) ranged as follows: DDTs, 13-7700; HCHs, 64-847; HCB, 24-564; sum of 15 PCBs, 75-1021; and sum of 9 PBDEs, below detection limit −27. Soil DDT, HCB, PCB and PBDE concentrations were strongly influenced by soil organic carbon content. HCH concentrations were clearly associated with the proximity to source regions in south Asia. The air–soil equilibrium status of POPs suggested the Tibetan soils may be partial “secondary sources” of HCB, low molecular weight PCBs and HCHs and will likely continue to be “sinks” for the less volatile DDE and DDT. - Highlights: ► Soil organic carbon content influence the spatial distribution of persistent organic pollutants. ► The Tibetan soil acts as “secondary sources” for HCB, low molecular weight PCBs and HCHs. ► The Tibetan soil will continue to be “sinks” for DDE and DDT. - Tibetan soils may be potential “secondary sources” of the HCB, low molecular weight PCBs and HCHs that are observed in air.

Soils Developed on Geomorphic Surfaces in the Mountain Region of the State of Rio de Janeiro

Directory of Open Access Journals (Sweden)

Ademir Fontana

2018-01-01

Full Text Available ABSTRACT: The evaluation of soils in representative landscapes constitutes an opportunity to evaluate spatial distribution, discuss formation processes, and apply this knowledge to land use and management. In this sense, from the perspective of an environmentally diversified region, the aim of the present study is to evaluate the occurrence and understand the formation of soils in different geomorphic surfaces of a landscape from a mountain region in the state of Rio de Janeiro. The study was developed in the Pito Aceso microbasin in the municipality of Bom Jardim, composed of narrow valleys and a rugged mountain domain, with elevation between 640 and 1,270 m. In a representative landscape, the geomorphic surfaces were obtained from the slope segments and flow lines. On the geomorphic surfaces, soil profiles were described by their morphological properties, collected, and analyzed to describe the chemical and physical properties of each horizon. Geomorphological aspects and possible variations of the parent material directly affected pedogenesis and led to distinct soil classes in the landscape. Variation in the geomorphic surfaces directs the processes for soil formation under current conditions, as well as the preservation of polygenetic soils. Soils of lower development and with greater participation of the exchangeable cations were identified at the summit (talus deposit (Neossolo Litólico and Cambissolo Húmico and toeslope (colluvial-alluvial (Neossolo Flúvico, whereas more developed soils with lower nutrient content occur in the concave (Argissolos Vermelho and Amarelo and convex (Latossolo Amarelo backslope, except for the Argissolo Vermelho-Amarelo in the shoulder, which had high exchangeable cations contents.

Environmental Radionuclides in Surface Soils of Vietnam

International Nuclear Information System (INIS)

Hien, P.D.; Hiep, H.T.; Quang, N.H.; Luyen, T.V.; Binh, T.V.; Ngo, N.T.; Long, N.Q.; Bac, V.T.

2012-01-01

A database on 238 U, 232 Th, 40 K and 137 Cs in surface soils was established to provide inputs for the assessment of the collective dose to the population of Vietnam and to support soil erosion studies using 137 Cs as a tracer. A total of 292 soil samples were taken from undisturbed sites across the territory and the concentrations of radionuclides were determined by gamma spectrometry method. The multiple regression of 137 Cs inventories against characteristics of sampling locations allowed us to establish the distribution of 137 Cs deposition density and its relationship with latitude and annual rainfall. The 137 Cs deposition density increases northward and varies from 178 Bq m -2 to 1,920 Bq m -2 . High rainfall areas in the northern and central parts of the country have received considerable 137 Cs inputs exceeding 600 Bq m -2 , which is the maximum value that can be expected for Vietnam from the UNSCEAR global pattern. The mean activity concentrations of naturally occurring radionuclides 238 U, 232 Th and 40 K are 45, 59 and 401 Bq kg- 1 , respectively, which entail an average absorbed dose rate in air of 62 nGy h -1 , which is about 7% higher than the world average. (author)

Evaluating the Performance of a Surface Barrier on Reducing Soil-Water Flow

Energy Technology Data Exchange (ETDEWEB)

Zhang, Z. F.; Strickland, Christopher E.; Field, Jim G.; Parker, Danny L.; Clayton, Ray E.

2012-08-31

One of the most common effective techniques for contaminant remediation in the vadose zone is to use a surface barrier to reduce or eliminate soil-water flow to reduce the contaminant flux to the underlying groundwater. Confirming the reduction of the soil-water flux rate is challenging because of the difficulty of determining the very low soil-water flux beneath the barrier. We propose a hydraulic-conductivity factor, fK, as a conservative indicator for quantifying the reduction of soil-water flow. The factor can be calculated using the measured soil-water content or pressure but does not require the knowledge of the saturated hydraulic conductivity or the hydraulic gradient. The formulas were tested by comparing with changes in hydraulic conductivity, K, from a drainage experiment. The pressure-based formula was further applied to evaluate the performance of the interim surface barrier at T Tank Farm on Hanford Site. Three years after barrier emplacement, the hydraulic conductivity decreased by a factor between 3.8 and 13.0 at the 1-, 2- and 5-m depths. The difference between the conductivity-reduction factor and the flux-rate-reduction factor, fq, was quantified with a numerical simulation. With the calculated fK, the numerically determined fK/fq ratio, and the assumed pre-barrier soil-water flux rate of 100 mm yr-1, the estimated soil-water flux rate 3 years after barrier emplacement was no more than 8.5 mm yr-1 at or above the 5-m depth.

Molasses as C source for heterotrophic bacteria production on solid fish waste

NARCIS (Netherlands)

Schneider, O.; Sereti, V.; Eding, E.H.; Verreth, J.A.J.

2006-01-01

The drumfilter effluent from a recirculation aquaculture system (RAS) can be used as substrate for heterotrophic bacteria production. These bacteria can be reused as aquatic feed. In RAS drumfilter effluents are organic carbon deficient for bacteria production. This is due to nitrogen accumulation

Study on distribution and behavior of long-lived radionuclides in surface soil environment

International Nuclear Information System (INIS)

Morita, Shigemitsu; Watanabe, Hitoshi; Katagiri, Hiromi; Akatsu, Yasuo; Ishiguro, Hideharu

1996-01-01

Technetium-99 ( 99 Tc) and Neptunium-237 ( 237 Np) are important radionuclides for environmental assessment around nuclear fuel cycle facilities, because these have long-lives and relatively high mobility in the environment. Therefore, we have been studied the determination, distribution and behavior of such long-lived radionuclides in surface soil environment. A new analytical technique using Inductively Coupled Plasma Mass Spectrometry (ICP-MS) was applied to the determination of long-lived radionuclides in environmental samples. The determination method consists of dry ashing, anion exchange and solvent extraction to eliminate the interfering elements and ICP-MS measurement. The sensitivity of this method was 10 to 100,000 times higher, and the counting time was 300 to 100,000 times shorter than the conventional radioanalytical methods. The soil samples were collected at nine points and core soil sample was collected by an electric core sampler at one point. The core soil sample was divided into eight layers. The depth profiles showed that more than 90% of 99 Tc and 237 Np were retained in the surface layer up to 10cm in depth which contained much amount of organic materials. The results suggest that content of organic materials in soil is related to adsorption of 99 Tc and 237 Np onto soil. (author)

Acidophilic algae isolated from mine-impacted environments and their roles in sustaining heterotrophic acidophiles

Directory of Open Access Journals (Sweden)

David Barrie Johnson

2012-09-01

Full Text Available Two acidophilic algae, identified as strains of Chlorella protothecoides var. acidicola and Euglena mutabilis, were isolated in pure culture from abandoned copper mines in Spain and Wales and grown in pH- and temperature-controlled bioreactors. The Chlorella isolate grew optimally at pH 2.5 and 30 ˚C, with a corresponding culture doubling time of 9 hours. The isolates displayed similar tolerance (10-50 mM to four transition metals tested. Growth of the algae in liquid media was paralleled with increasing concentrations of dissolved organic carbon (DOC. Glycolic acid was identified as a significant component (12- 14% of total DOC. Protracted incubation resulted in concentrations of glycolic acid declining in both cases, and glycolic acid added to a culture of Chlorella incubated in the dark was taken up by the alga (~100% within three days. Two monosaccharides were identified in cell-free liquors of each algal isolate: fructose and glucose (Chlorella, and mannitol and glucose (Euglena. These were rapidly metabolised by acidophilic heterotrophic bacteria (Acidiphilium and Acidobacterium spp. though only fructose was utilised by the more fastidious heterotroph Acidocella aromatica. The significance of algae in promoting the growth of iron- (and sulfate- reducing heterotrophic acidophiles that are important in remediating mine-impacted waters is discussed.

Role of soil health in maintaining environmental sustainability of surface coal mining.

Science.gov (United States)

Acton, Peter M; Fox, James F; Campbell, J Elliott; Jones, Alice L; Rowe, Harold; Martin, Darren; Bryson, Sebastian

2011-12-01

Mountaintop coal mining (MCM) in the Southern Appalachian forest region greatly impacts both soil and aquatic ecosystems. Policy and practice currently in place emphasize water quality and soil stability but do not consider upland soil health. Here we report soil organic carbon (SOC) measurements and other soil quality indicators for reclaimed soils in the Southern Appalachian forest region to quantify the health of the soil ecosystem. The SOC sequestration rate of the MCM soils was 1.3 MgC ha(-1) yr(-1) and stocks ranged from 1.3 ± 0.9 to 20.9 ± 5.9 Mg ha(-1) and contained only 11% of the SOC of surrounding forest soils. Comparable reclaimed mining soils reported in the literature that are supportive of soil ecosystem health had SOC stocks 2.5-5 times greater than the MCM soils and sequestration rates were also 1.6-3 times greater. The high compaction associated with reclamation in this region greatly reduces both the vegetative rooting depth and infiltration of the soil and increases surface runoff, thus bypassing the ability of soil to naturally filter groundwater. In the context of environmental sustainability of MCM, it is proposed that the entire watershed ecosystem be assessed and that a revision of current policy be conducted to reflect the health of both water and soil.

Effects of intense agricultural practices on heterotrophic processes in streams

Energy Technology Data Exchange (ETDEWEB)

Piscart, Christophe [Universite Claude Bernard Lyon 1 - Laboratoire d' Ecologie des Hydrosystemes Fluviaux - UMR CNRS 5023 - Campus Doua, 43 Bd du 11 Novembre 1918, 69622 Villeurbanne Cedex (France); Universite de Rennes 1 - UMR CNRS ECOBIO 6553 - Campus Beaulieu, 263 Av. du General Leclerc, 35042 Rennes Cedex (France)], E-mail: christophe.piscart@univ-lyon1.fr; Genoel, Romuald [Universite de Rennes 1 - UMR CNRS ECOBIO 6553 - Campus Beaulieu, 263 Av. du General Leclerc, 35042 Rennes Cedex (France); Doledec, Sylvain [Universite Claude Bernard Lyon 1 - Laboratoire d' Ecologie des Hydrosystemes Fluviaux - UMR CNRS 5023 - Campus Doua, 43 Bd du 11 Novembre 1918, 69622 Villeurbanne Cedex (France); Chauvet, Eric [Universite Paul Sabatier de Toulouse - Laboratoire EcoLab - UMR CNRS 5245, 29 rue Jeanne Marvig, 31055 Toulouse Cedex 4 (France); Marmonier, Pierre [Universite Claude Bernard Lyon 1 - Laboratoire d' Ecologie des Hydrosystemes Fluviaux - UMR CNRS 5023 - Campus Doua, 43 Bd du 11 Novembre 1918, 69622 Villeurbanne Cedex (France); Universite de Rennes 1 - UMR CNRS ECOBIO 6553 - Campus Beaulieu, 263 Av. du General Leclerc, 35042 Rennes Cedex (France)

2009-03-15

In developed countries, changes in agriculture practices have greatly accelerated the degradation of the landscape and the functioning of adjacent aquatic ecosystems. Such alteration can in turn impair the services provided by aquatic ecosystems, namely the decomposition of organic matter, a key process in most small streams. To study this alteration, we recorded three measures of heterotrophic activity corresponding to microbial hydrolasic activity (FDA hydrolysis) and leaf litter breakdown rates with (k{sub c}) and without invertebrates (k{sub f}) along a gradient of contrasted agricultural pressures. Hydrolasic activity and k{sub f} reflect local/microhabitat conditions (i.e. nutrient concentrations and organic matter content of the sediment) but not land use while k{sub c} reflects land-use conditions. k{sub c}, which is positively correlated with the biomass of Gammaridae, significantly decreased with increasing agricultural pressure, contrary to the taxonomic richness and biomass of Trichoptera and Plecoptera. Gammaridae may thus be considered a key species for organic matter recycling in agriculture-impacted streams. - This study highlights the consequences of intensive agricultural practices on heterotrophic processes in streams along a strong gradient of perturbation.

Depth Dependent Relationships between Temperature and Ocean Heterotrophic Prokaryotic Production

KAUST Repository

Lønborg, Christian

2016-06-07

Marine prokaryotes play a key role in cycling of organic matter and nutrients in the ocean. Using a unique dataset (>14,500 samples), we applied a space-for-time substitution analysis to assess the temperature dependence of prokaryotic heterotrophic production (PHP) in epi- (0-200 m), meso- (201-1000 m) and bathypelagic waters (1001-4000 m) of the global ocean. Here, we show that the temperature dependence of PHP is fundamentally different between these major oceanic depth layers, with an estimated ecosystem-level activation energy (E) of 36 ± 7 kJ mol for the epipelagic, 72 ± 15 kJ mol for the mesopelagic and 274 ± 65 kJ mol for the bathypelagic realm. We suggest that the increasing temperature dependence with depth is related to the parallel vertical gradient in the proportion of recalcitrant organic compounds. These Ea predict an increased PHP of about 5, 12, and 55% in the epi-, meso-, and bathypelagic ocean, respectively, in response to a water temperature increase by 1°C. Hence, there is indication that a major thus far underestimated feedback mechanism exists between future bathypelagic ocean warming and heterotrophic prokaryotic activity.

Depth Dependent Relationships between Temperature and Ocean Heterotrophic Prokaryotic Production

KAUST Repository

Lø nborg, Christian; Cuevas, L. Antonio; Reinthaler, Thomas; Herndl, Gerhard J.; Gasol, Josep M.; Moran, Xose Anxelu G.; Bates, Nicholas R.; á lvarez-Salgado, Xosé A.

2016-01-01

Marine prokaryotes play a key role in cycling of organic matter and nutrients in the ocean. Using a unique dataset (>14,500 samples), we applied a space-for-time substitution analysis to assess the temperature dependence of prokaryotic heterotrophic production (PHP) in epi- (0-200 m), meso- (201-1000 m) and bathypelagic waters (1001-4000 m) of the global ocean. Here, we show that the temperature dependence of PHP is fundamentally different between these major oceanic depth layers, with an estimated ecosystem-level activation energy (E) of 36 ± 7 kJ mol for the epipelagic, 72 ± 15 kJ mol for the mesopelagic and 274 ± 65 kJ mol for the bathypelagic realm. We suggest that the increasing temperature dependence with depth is related to the parallel vertical gradient in the proportion of recalcitrant organic compounds. These Ea predict an increased PHP of about 5, 12, and 55% in the epi-, meso-, and bathypelagic ocean, respectively, in response to a water temperature increase by 1°C. Hence, there is indication that a major thus far underestimated feedback mechanism exists between future bathypelagic ocean warming and heterotrophic prokaryotic activity.

Bacterial abundance, communities and heterotrophic activities in the coastal waters off Tamil Nadu

Digital Repository Service at National Institute of Oceanography (India)

Ramaiah, N.; Raghukumar, C.; Sheelu, G.; Chandramohan, D.

Culturable aerobic heterotrophic bacterial (CAHB) numbers, total direct counts (TDC), bacterial generic composition and uptake of labelled glucose by natural microbial assemblages were studied from a few selected coastal sites off Tamil Nadu. A high...

Surface Complexation Modeling in Variable Charge Soils: Charge Characterization by Potentiometric Titration

Directory of Open Access Journals (Sweden)

Giuliano Marchi

2015-10-01

Full Text Available ABSTRACT Intrinsic equilibrium constants of 17 representative Brazilian Oxisols were estimated from potentiometric titration measuring the adsorption of H+ and OH− on amphoteric surfaces in suspensions of varying ionic strength. Equilibrium constants were fitted to two surface complexation models: diffuse layer and constant capacitance. The former was fitted by calculating total site concentration from curve fitting estimates and pH-extrapolation of the intrinsic equilibrium constants to the PZNPC (hand calculation, considering one and two reactive sites, and by the FITEQL software. The latter was fitted only by FITEQL, with one reactive site. Soil chemical and physical properties were correlated to the intrinsic equilibrium constants. Both surface complexation models satisfactorily fit our experimental data, but for results at low ionic strength, optimization did not converge in FITEQL. Data were incorporated in Visual MINTEQ and they provide a modeling system that can predict protonation-dissociation reactions in the soil surface under changing environmental conditions.

Urban Soil: Assessing Ground Cover Impact on Surface Temperature and Thermal Comfort.

Science.gov (United States)

Brandani, Giada; Napoli, Marco; Massetti, Luciano; Petralli, Martina; Orlandini, Simone

2016-01-01

The urban population growth, together with the contemporary deindustrialization of metropolitan areas, has resulted in a large amount of available land with new possible uses. It is well known that urban green areas provide several benefits in the surrounding environment, such as the improvement of thermal comfort conditions for the population during summer heat waves. The purpose of this study is to provide useful information on thermal regimes of urban soils to urban planners to be used during an urban transformation to mitigate surface temperatures and improve human thermal comfort. Field measurements of solar radiation, surface temperature (), air temperature (), relative humidity, and wind speed were collected on four types of urban soils and pavements in the city of Florence during summer 2014. Analysis of days under calm, clear-sky condition is reported. During daytime, sun-to-shadow differences for , apparent temperature index (ATI), and were significantly positive for all surfaces. Conversely, during nighttime, differences among all surfaces were significantly negative, whereas ATI showed significantly positive differences. Moreover, was significantly negative for grass and gravel. Relative to the shaded surfaces, was higher on white gravel and grass than gray sandstone and asphalt during nighttime, whereas gray sandstone was always the warmest surface during daytime. Conversely, no differences were found during nighttime for ATI and measured over surfaces that were exposed to sun during the day, whereas showed higher values on gravel than grass and asphalt during nighttime. An exposed surface warms less if its albedo is high, leading to a significant reduction of during daytime. These results underline the importance of considering the effects of surface characteristics on surface temperature and thermal comfort. This would be fundamental for addressing urban environment issues toward the heat island mitigation considering also the impact of urban

The influence of the organophosphorus insecticides acephate and parathion upon the heterotrophic bacteria of two freshwater ecosystems

International Nuclear Information System (INIS)

Albright, L.J.; Geen, G.H.; Gasith, A.; Mozel, Y.; Perry, A.S.

1983-01-01

The effect of acephate and parathion on the heterotrophic bacteria of freshwater ecosystems was studied in a dystrophic west coast Canadian lake and in an eutrophic Israeli fish pond. The limnocorrals were treated with 1-25 ppm of acephate and 30-40 ppb of parathion respectively. Bacterial populations, glucose heterotrophic activities and bacterial and algal productivities were studied using 3 H and 14 C radioisotopes. It is concluded that the two ecosystems are not extensively affected by the pesticide concentrations used

Simultaneous heterotrophic nitrification and aerobic denitrification by the marine origin bacterium Pseudomonas sp. ADN-42.

Science.gov (United States)

Jin, Ruofei; Liu, Tianqi; Liu, Guangfei; Zhou, Jiti; Huang, Jianyu; Wang, Aijie

2015-02-01

Recent research has highlighted the existence of some bacteria that are capable of performing heterotrophic nitrification and have a phenomenal ability to denitrify their nitrification products under aerobic conditions. A high-salinity-tolerant strain ADN-42 was isolated from Hymeniacidon perleve and found to display high heterotrophic ammonium removal capability. This strain was identified as Pseudomonas sp. via 16S rRNA gene sequence analysis. Gene cloning and sequencing analysis indicated that the bacterial genome contains N2O reductase function (nosZ) gene. NH3-N removal rate of ADN-42 was very high. And the highest removal rate was 6.52 mg/L · h in the presence of 40 g/L NaCl. Under the condition of pure oxygen (DO >8 mg/L), NH3-N removal efficiency was 56.9 %. Moreover, 38.4 % of oxygen remained in the upper gas space during 72 h without greenhouse gas N2O production. Keeping continuous and low level of dissolved oxygen (DO <3 mg/L) was helpful for better denitrification performance. All these results indicated that the strain has heterotrophic nitrification and aerobic denitrification abilities, which guarantee future application in wastewater treatment.

Polycyclic aromatic hydrocarbons in surface soil across the Tibetan Plateau: Spatial distribution, source and air–soil exchange

International Nuclear Information System (INIS)

Wang, Chuanfei; Wang, Xiaoping; Gong, Ping; Yao, Tandong

2014-01-01

There are limited data on polycyclic aromatic hydrocarbons (PAHs) in both the atmosphere and soil of the Tibetan Plateau (TP). Concentrations of PAHs were therefore measured in 13 XAD resin-based passive air samplers and 41 surface (0–5 cm) soil samples across the TP. The average concentration of atmospheric PAHs was 5.55 ng/m 3 , which was lower than that reported for other background areas, but higher than the Arctic. Concentrations in the soils fell in a wide range from 5.54 to 389 ng/g, with an average of 59.9 ng/g. Elevation was found to play an important role in determining the spatial distribution of soil PAHs. The air–soil exchange state showed that the soils of the TP will likely remain as a sink for high molecular weight PAHs, but may become a potential “secondary source” for low molecular weight PAHs. Highlights: • The levels of PAHs in air and soil of the Tibetan Plateau were relatively lower than other background region of world. • The soil PAHs concentration decreased with the increase of elevation. • The Tibetan Plateau will likely remain as a sink for high molecular weight PAHs. • The Tibetan Plateau may become a potential “secondary source” for low molecular weight PAHs. -- The Tibetan soil will likely remain as a sink for high molecular weight PAHs, but may become a potential “secondary source” for low molecular weight PAHs

Stable isotopic constraints on global soil organic carbon turnover

Science.gov (United States)

Wang, Chao; Houlton, Benjamin Z.; Liu, Dongwei; Hou, Jianfeng; Cheng, Weixin; Bai, Edith

2018-02-01

Carbon dioxide release during soil organic carbon (SOC) turnover is a pivotal component of atmospheric CO2 concentrations and global climate change. However, reliably measuring SOC turnover rates on large spatial and temporal scales remains challenging. Here we use a natural carbon isotope approach, defined as beta (β), which was quantified from the δ13C of vegetation and soil reported in the literature (176 separate soil profiles), to examine large-scale controls of climate, soil physical properties and nutrients over patterns of SOC turnover across terrestrial biomes worldwide. We report a significant relationship between β and calculated soil C turnover rates (k), which were estimated by dividing soil heterotrophic respiration rates by SOC pools. ln( - β) exhibits a significant linear relationship with mean annual temperature, but a more complex polynomial relationship with mean annual precipitation, implying strong-feedbacks of SOC turnover to climate changes. Soil nitrogen (N) and clay content correlate strongly and positively with ln( - β), revealing the additional influence of nutrients and physical soil properties on SOC decomposition rates. Furthermore, a strong (R2 = 0.76; p turnover and thereby improving predictions of multiple global change influences over terrestrial C-climate feedback.

Sensitivity of decomposition rates of soil organic matter with respect to simultaneous changes in temperature and moisture

Science.gov (United States)

Sierra, Carlos A.; Trumbore, Susan E.; Davidson, Eric A.; Vicca, Sara; Janssens, I.

2015-03-01

The sensitivity of soil organic matter decomposition to global environmental change is a topic of prominent relevance for the global carbon cycle. Decomposition depends on multiple factors that are being altered simultaneously as a result of global environmental change; therefore, it is important to study the sensitivity of the rates of soil organic matter decomposition with respect to multiple and interacting drivers. In this manuscript, we present an analysis of the potential response of decomposition rates to simultaneous changes in temperature and moisture. To address this problem, we first present a theoretical framework to study the sensitivity of soil organic matter decomposition when multiple driving factors change simultaneously. We then apply this framework to models and data at different levels of abstraction: (1) to a mechanistic model that addresses the limitation of enzyme activity by simultaneous effects of temperature and soil water content, the latter controlling substrate supply and oxygen concentration for microbial activity; (2) to different mathematical functions used to represent temperature and moisture effects on decomposition in biogeochemical models. To contrast model predictions at these two levels of organization, we compiled different data sets of observed responses in field and laboratory studies. Then we applied our conceptual framework to: (3) observations of heterotrophic respiration at the ecosystem level; (4) laboratory experiments looking at the response of heterotrophic respiration to independent changes in moisture and temperature; and (5) ecosystem-level experiments manipulating soil temperature and water content simultaneously.

Effect of soil erosion on the long-term stability of FUSRAP near-surface waste-burial sites

International Nuclear Information System (INIS)

Knight, M.J.

1983-04-01

Decontamination of FUSRAP sites could result in the generation of large volumes (in excess of 400,000 m 3 ) of low-activity radioactive wastes (primarily contaminated soil and building materials) requiring subsequent disposal. It is likely that near-surface burial will be seriously considered as an option for disposal of these materials. A number of factors - including soil erosion - could adversely affect the long-term stability of a near-surface waste-burial site. The majority of FUSRAP sites are located in the humid eastern United States, where the principal cause of erosion is the action of water. This report examines the effect of soil erosion by water on burial-site stability based on analysis of four hypothetical near-surface burial sites. The Universal Soil Loss Equation was employed to estimate average annual soil loss from burial sites and the 1000-year effects of soil loss on the soil barrier (burial trench cap) placed over low-activity wastes. Results suggest that the land use of the burial site and the slope gradient of the burial trench cap significantly affect the rate of soil erosion. The development of measures limiting the potential land use of a burial site (e.g., mixing large rocks into the burial trench cap) may be required to preserve the integrity of a burial trench for long periods of time

Separating Autotrophic and Heterotrophic Respiration in Streams and the Importance for Carbon Cycling: a Preliminary Study

Science.gov (United States)

Bozeman, M.; Raymond, P.

2005-05-01

Autotrophic and heterotrophic organisms confer different effects on nutrient cycling, especially on carbon (C). In stream ecosystems, net ecosystem production determines the amount and form of C exported; however any transformation due to different respiratory (R) mechanisms are not separated. These mechanisms highly influence the form and lability of the C transported. To understand the current state of knowledge and estimate the importance of autotrophic versus heterotrophic R, we obtained a range of respiratory rates from the literature and modeled effects of different balances of rates on bulk dissolved inorganic and organic C chemistry. Preliminary results show that a wide range of estimates of autotrophic R exist and that these can effect bulk properties of exported C. While specific effects are highly dependent upon physical structure of the study watershed, we offer that separating R mechanisms provides further insight into ecosystem C cycling. We also propose a method to measure autotrophic and heterotrophic R at the ecosystem scale and obtain watershed-level estimates of the importance of these processes on C cycling.

Micro-electrolysis/retinervus luffae-based simultaneous autotrophic and heterotrophic denitrification for low C/N wastewater treatment.

Science.gov (United States)

Li, Jinlong; Li, Desheng; Cui, Yuwei; Xing, Wei; Deng, Shihai

2017-07-01

Nitrogen bioremediation in organic insufficient wastewater generally requires an extra carbon source. In this study, nitrate-contaminated wastewater was treated effectively through simultaneous autotrophic and heterotrophic denitrification based on micro-electrolysis carriers (MECs) and retinervus luffae fructus (RLF), respectively. The average nitrate and total nitrogen removal rates reached 96.3 and 94.0% in the MECs/RLF-based autotrophic and heterotrophic denitrification (MRAHD) system without ammonia and nitrite accumulation. The performance of MRAHD was better than that of MEC-based autotrophic denitrification for the wastewater treatment with low carbon nitrogen (COD/N) ratio. Real-time quantitative polymerase chain reaction (qPCR) revealed that the relative abundance of nirS-type denitrifiers attached to MECs (4.9%) and RLF (5.0%) was similar. Illumina sequencing suggested that the dominant genera were Thiobacillus (7.0%) and Denitratisoma (5.7%), which attached to MECs and RLF, respectively. Sulfuritalea was discovered as the dominant genus in the middle of the reactor. The synergistic interaction between autotrophic and heterotrophic denitrifiers played a vital role in the mixotrophic substrate environment.

Insecticide dissipation from soil and plant surfaces in tropical horticulture of southern Benin, West Africa.

Science.gov (United States)

Rosendahl, Ingrid; Laabs, Volker; Atcha-Ahowé, Cyrien; James, Braima; Amelung, Wulf

2009-06-01

In Sub-Saharan Africa, horticulture provides livelihood opportunities for millions of people, especially in urban and peri-urban areas. Although the vegetable agroecosystems are often characterized by intensive pesticide use, risks resulting therefrom are largely unknown under tropical horticultural conditions. The objective of this study therefore was to study the fate of pesticides in two representative horticultural soils (Acrisol and Arenosol) and plants (Solanum macrocarpon L.) after field application and thus to gain first insight on environmental persistence and dispersion of typical insecticides used in vegetable horticulture in Benin, West Africa. On plant surfaces, dissipation was rapid with half lives ranging from 2 to 87 h (alpha-endosulfan < beta-endosulfan < deltamethrin). Soil dissipation was considerably slower than dissipation from plant surfaces with half-lives ranging from 3 (diazinon) to 74 d (total endosulfan), but persistence of pesticides in soil was still reduced compared to temperate climates. Nevertheless, for deltamethrin and endosulfan, a tendency for mid-term accumulation in soil upon repeated applications was observed. The soil and plant surface concentrations of the metabolite endosulfan sulfate increased during the entire trial period, indicating that this compound is a potential long-term pollutant even in tropical environments.

Soil-characterization and soil-amendment use on coal surface mine lands: An annotated bibliography. Information Circular/1991

International Nuclear Information System (INIS)

Norland, M.R.; Veith, D.L.

1991-01-01

The U.S. Bureau of Mines Report on United States and Canadian Literature pertaining to soil characterization and the use of soil amendments as a part of the reclamation process of coal surface-mined lands contains 1,280 references. The references were published during the 1977 to 1988 period. Each reference is evaluated by keywords, providing the reader with a means of rapidly sorting through the references to locate those articles with the coal mining regions and subjects of interest. All references are annotated

Treatment of cattle-slaughterhouse wastewater and the reuse of sludge for biodiesel production by microalgal heterotrophic bioreactors

Directory of Open Access Journals (Sweden)

Mariana Manzoni Maroneze

2014-12-01

Full Text Available Microalgal heterotrophic bioreactors are a potential technological development that can convert organic matter, nitrogen and phosphorus of wastewaters into a biomass suitable for energy production. The aim of this work was to evaluate the performance of microalgal heterotrophic bioreactors in the secondary treatment of cattle-slaughterhouse wastewater and the reuse of microalgal sludge for biodiesel production. The experiments were performed in a bubble column bioreactor using the microalgae Phormidium sp. Heterotrophic microalgal bioreactors removed 90 % of the chemical oxygen demand, 57 % of total nitrogen and 52 % of total phosphorus. Substantial microalgal sludge is produced in the process (substrate yield coefficient of 0.43 mg sludge mg chemical oxygen demand−¹, resulting in a biomass with high potential for producing biodiesel (ester content of more than 99 %, cetane number of 55, iodine value of 73.5 g iodine 100 g−¹, unsaturation degree of ~75 % and a cold filter plugging point of 5 ºC.

Impact of temperature on the biological properties of soil

Science.gov (United States)

Borowik, Agata; Wyszkowska, Jadwiga

2016-01-01

The aim of the study was to determine the response of soil microorganisms and enzymes to the temperature of soil. The effect of the temperatures: 5, 10, 15, 20, and 25°C on the biological properties of soil was investigated under laboratory conditions. The study was performed using four different soils differing in their granulometric composition. It was found that 15°C was the optimal temperature for the development of microorganisms in soil. Typically, in the soil, the highest activity of dehydrogenases was observed at 10-15°C, catalase and acid phosphatase - at 15°C, alkaline phosphatase at 20°C, urease and β-glucosidase at 25°C. The highest colony development index for heterotrophic bacteria was recorded in soils incubated at 25°C, while for actinomycetes and fungi at 15°C. The incubation temperature of soil only slightly changed the ecophysiological variety of the investigated groups of microorganisms. Therefore, the observed climate changes might have a limited impact on the soil microbiological activity, because of the high ability of microorganisms to adopt. The response of soil microorganisms and enzymes was more dependent on the soil granulometric composition, organic carbon, and total nitrogen than on its temperature.

Interactive effects of wildfire and permafrost on microbial communities and soil processes in an Alaskan black spruce forest.

Science.gov (United States)

Mark P. Waldrop; Jennifer W. Harden

2008-01-01

Boreal forests contain significant quantities of soil carbon that may be oxidized to CO2 given future increases in climate warming and wildfire behavior. At the ecosystem scale, decomposition and heterotrophic respiration are strongly controlled by temperature and moisture, but we questioned whether changes in microbial biomass, activity, or...

Soil properties and clover establishment six years after surface application of calcium-rich by-products

Energy Technology Data Exchange (ETDEWEB)

Ritchey, K.D.; Belesky, D.P.; Halvorson, J.J. [USDA ARS, Beaver, WV (US). Appalachian Farming Systems Research Center

2004-12-01

Calcium-rich soil amendments can improve plant growth by supplying Ca and reducing detrimental effects of soil acidity, but solubility and neutralizing capacity of Ca sources vary. Our objectives were to evaluate effects of calcitic dolomite and several coal combustion by-products on soil properties at various depths 6 yr after surface application and their influence on grass-clover herbage accumulation. Calcium and Mg soil amendments were surface-applied to an acidic grassland in 1993, and orchardgrass (Dactylis glomerata L.) and tall fescue (Lolium arundinaceum (Schreb.) Darbyshire) were oversown in 1994. In 1998, amendment treatment plots were split to accommodate sod seeding with red clover (Trifolium pratense L.) or white clover (T. repens L.) as well as a nonseeded control. No N fertilizer was applied after sod seeding. Six years after amendment application, reductions in soil Al and Mn and increases in Ca and pH from 4654 kg ha{sup -1} calcitic dolomite, 15 000 kg ha{sup -1} fluidized bed combustion residue, or 526 kg ha{sup -1} MgO amendment were greatest in the surface 2.5 cm while rates of gypsum as high as 32 000 kg ha{sup -1} left little residual effect except for decreases in Mg. Percentage clover in the sward tripled as pH increased from 4.3 to 5.0 while herbage mass increased 75% as clover percentage increased. Herbage mass was generally more closely correlated with properties of soil samples collected from the surface 2.5 cm than from deeper samples.

The Effect of Aluminium on Antibacterial Properties and the Content of Some Fatty Acids in Microalgae, Chlorella vulgaris Beijernick, under Heterotrophic and Autotrophic Conditions

Directory of Open Access Journals (Sweden)

Hossein Abbaspour

2017-01-01

Full Text Available Microalgae are a group of organisms, which have a significant potential for industrial applications. These algae contain large amounts of lipids compounds that are beneficial to health, have antibacterial properties, and their extracted oil can be used for biofuel. In this study, microalgae Chlorella vulgaris Beijernick was grown in the culture medium BG-11 containing aluminium (AlCl3 under autotrophic and heterotrophic conditions. In each case, survival and growth, dry weight, internal aluminium content of the sample, antibacterial properties, the content of fatty acids accumulated in the algae and secreted into the culture medium in the logarithmic growth phase were studied. Aluminium significantly increased (P < .05 growth and dry weight in autotrophic treatment compared to the heterotrophic one. Most antibacterial properties were observed in methanol extracts of heterotrophic treatments containing 0.05% glucose. Aluminium also decreased fatty acids accumulation in the algae and increased fatty acids excretion into the culture medium in heterotrophic treatment compared to the autotrophic treatment. Survival of the sample was maintained in heterotrophic conditions and showed growth without lag phase, which is indicative of rapid acclimation of organisms in heterotrophic conditions. It seems that the mentioned characteristics make the single-celled green algae Chlorella vulgaris more efficient in different ways.

Unicellular cyanobacteria synechocystis accommodate heterotrophic bacteria with varied enzymatic and metal resistance properties

Digital Repository Service at National Institute of Oceanography (India)

Anas, A.; Sageer, S.; Jasmin, C.; Vijayan, V.; Pavanan, P.; Athiyanathil, S.; Nair, S.

unicellular cyanobacterium Synechocystis sp. that came from a heavy metal contaminated region of Cochin estuary, southwest coast of India. Based on 16S rRNA gene sequence similarities, the heterotrophic bacteria were grouped into three phyla: namely...

Geographical trends in 137Cs fallout from the Chernobyl accident and leaching from natural surface soil in Norway

International Nuclear Information System (INIS)

Gjelsvik, Runhild; Steinnes, Eiliv

2013-01-01

In order to follow the turnover of 137 Cs in natural soils and estimate future trends in exposure of livestock, samples of natural surface soils were collected at 0–3 cm depth at 464 sites in 1995 and 463 sites in 2005 covering the country. In both cases the geographical pattern observed was similar to the original distribution from 1986, but the decline of 137 Cs activity in the surface soil was not the same everywhere. In 1995 the 137 Cs reduction since 1986 was found to be considerably greater in coastal areas than farther inland. The main reason for this appears to be the much greater deposition of marine cations such as Mg 2+ and Na + in the coastal areas, replacing Cs ions fixed on soil particle surfaces. This cation exchange appeared to be particularly strong near the southern coast where deposition of NH 4 + from transboundary air pollution is evident in addition to the marine cations. During 1995–2005 the 137 Cs decline in the surface soil was more uniform over the country than in the preceding 10-year period but still significantly higher in coastal areas than inland. Differences in precipitation chemistry may have influenced the uptake of 137 Cs in terrestrial food chains. -- Highlights: • We investigated the decline of 137 Cs in natural surface soil in Norway in 1986–2005. • The reduction of 137 Cs in soil was greater in coastal areas then farther inland. • Deposition of marine cations were replacing Cs ions fixed on soil particle surfaces. • In areas with nitrogen compounds NH 4 + cation may compete with Cs + cation

Isolation of a significant fraction of non-phototroph diversity from a desert Biological Soil Crust

Directory of Open Access Journals (Sweden)

Ulisses eNunes da Rocha

2015-04-01

Full Text Available Biological Soil Crusts (BSCs are organosedimentary assemblages comprised of microbes and minerals in topsoil of terrestrial environments. BSCs strongly impact soil quality in dryland ecosystems (e.g., soil structure and nutrient yields due to pioneer species such as Microcoleus vaginatus; phototrophs that produce filaments that bind the soil together, and support an array of heterotrophic microorganisms. These microorganisms in turn contribute to soil stability and biogeochemistry of BSCs. Non-cyanobacterial populations of BSCs are less well known than cyanobacterial populations. Therefore, we attempted to isolate a broad range of numerically significant and phylogenetically representative BSC aerobic heterotrophs. Combining simple pre-treatments (hydration of BSCs under dark and light and isolation strategies (media with varying nutrient availability and protection from oxidative stress we recovered 402 bacterial and one fungal isolate in axenic culture, which comprised 116 phylotypes (at 97% 16S rRNA gene sequence homology, 115 bacterial and one fungal. Each medium enriched a mostly distinct subset of phylotypes, and cultivated phylotypes varied due to the BSC pre-treatment. The fraction of the total phylotype diversity isolated, weighted by relative abundance in the community, was determined by the overlap between isolate sequences and OTUs reconstructed from metagenome or metatranscriptome reads. Together, more than 8% of relative abundance of OTUs in the metagenome was represented by our isolates, a cultivation efficiency much larger than typically expected from most soils. We conclude that simple cultivation procedures combined with specific pre-treatment of samples afford a significant reduction in the culturability gap, enabling physiological and metabolic assays that rely on ecologically relevant axenic cultures.

Using infrared thermography for understanding and quantifying soil surface processes

Science.gov (United States)

de Lima, João L. M. P.

2017-04-01

At present, our understanding of the soil hydrologic response is restricted by measurement limitations. In the literature, there have been repeatedly calls for interdisciplinary approaches to expand our knowledge in this field and eventually overcome the limitations that are inherent to conventional measuring techniques used, for example, for tracing water at the basin, hillslope and even field or plot scales. Infrared thermography is a versatile, accurate and fast technique of monitoring surface temperature and has been used in a variety of fields, such as military surveillance, medical diagnosis, industrial processes optimisation, building inspections and agriculture. However, many applications are still to be fully explored. In surface hydrology, it has been successfully employed as a high spatial and temporal resolution non-invasive and non-destructive imaging tool to e.g. access groundwater discharges into waterbodies or quantify thermal heterogeneities of streams. It is believed that thermal infrared imagery can grasp the spatial and temporal variability of many processes at the soil surface. Thermography interprets the heat signals and can provide an attractive view for identifying both areas where water is flowing or has infiltrated more, or accumulated temporarily in depressions or macropores. Therefore, we hope to demonstrate the potential for thermal infrared imagery to indirectly make a quantitative estimation of several hydrologic processes. Applications include: e.g. mapping infiltration, microrelief and macropores; estimating flow velocities; defining sampling strategies; identifying water sources, accumulation of waters or even connectivity. Protocols for the assessment of several hydrologic processes with the help of IR thermography will be briefly explained, presenting some examples from laboratory soil flumes and field.

Initializing numerical weather prediction models with satellite-derived surface soil moisture: Data assimilation experiments with ECMWF's Integrated Forecast System and the TMI soil moisture data set

Science.gov (United States)

Drusch, M.

2007-02-01

Satellite-derived surface soil moisture data sets are readily available and have been used successfully in hydrological applications. In many operational numerical weather prediction systems the initial soil moisture conditions are analyzed from the modeled background and 2 m temperature and relative humidity. This approach has proven its efficiency to improve surface latent and sensible heat fluxes and consequently the forecast on large geographical domains. However, since soil moisture is not always related to screen level variables, model errors and uncertainties in the forcing data can accumulate in root zone soil moisture. Remotely sensed surface soil moisture is directly linked to the model's uppermost soil layer and therefore is a stronger constraint for the soil moisture analysis. For this study, three data assimilation experiments with the Integrated Forecast System (IFS) of the European Centre for Medium-Range Weather Forecasts (ECMWF) have been performed for the 2-month period of June and July 2002: a control run based on the operational soil moisture analysis, an open loop run with freely evolving soil moisture, and an experimental run incorporating TMI (TRMM Microwave Imager) derived soil moisture over the southern United States. In this experimental run the satellite-derived soil moisture product is introduced through a nudging scheme using 6-hourly increments. Apart from the soil moisture analysis, the system setup reflects the operational forecast configuration including the atmospheric 4D-Var analysis. Soil moisture analyzed in the nudging experiment is the most accurate estimate when compared against in situ observations from the Oklahoma Mesonet. The corresponding forecast for 2 m temperature and relative humidity is almost as accurate as in the control experiment. Furthermore, it is shown that the soil moisture analysis influences local weather parameters including the planetary boundary layer height and cloud coverage.

Wetland Ecohydrology: stochastic description of water level fluctuations across the soil surface

Science.gov (United States)

Tamea, S.; Muneepeerakul, R.; Laio, F.; Ridolfi, L.; Rodriguez-Iturbe, I.

2009-12-01

Wetlands provide a suite of social and ecological critical functions such as being habitats of disease-carrying vectors, providing buffer zones against hurricanes, controlling sediment transport, filtering nutrients and contaminants, and a repository of great biological diversity. More recently, wetlands have also been recognized as crucial for carbon storage in the context of global climate change. Despite such importance, quantitative approaches to many aspects of wetlands are far from adequate. Therefore, improving our quantitative understanding of wetlands is necessary to our ability to maintain, manage, and restore these invaluable environments. In wetlands, hydrologic factors and ecosystem processes interplay and generate unique characteristics and a delicate balance between biotic and abiotic elements. The main hydrologic driver of wetland ecosystems is the position of the water level that, being above or below ground, determines the submergence or exposure of soil. When the water level is above the soil surface, soil saturation and lack of oxygen causes hypoxia, anaerobic functioning of microorganisms and anoxic stress in plants, that might lead to the death of non-adapted organisms. When the water level lies below the soil surface, the ecosystem becomes groundwater-dependent, and pedological and physiological aspects play their role in the soil water balance. We propose here a quantitative description of wetland ecohydrology, through a stochastic process-based water balance, driven by a marked compound Poisson noise representing rainfall events. The model includes processes such as rainfall infiltration, evapotranspiration, capillary rise, and the contribution of external water bodies, which are quantified in a simple yet realistic way. The semi-analytical steady-state probability distributions of water level spanning across the soil surface are validated with data from the Everglades (Florida, USA). The model and its results allow for a quantitative

Genesis and Development of Soils along Different Geomorphic Surfaces in Kouh Birk Area, Mehrestan City

Directory of Open Access Journals (Sweden)

Mohammad Akbar Bahoorzahi

2017-02-01

Full Text Available Introduction: The optimum and sustainable use of soil is only possible with correct and complete understanding of its properties. The objectives of the present research were to study 1 genesis and development of soils related to different geomorphic surfaces in Kouh Birk Area (Mehrestan City, 2 Soil classification according to Soil Taxonomy (2014 and WRB (2014 systems, and 3 physicochemical properties, clay mineralogy and micromorphology of soils. Materials and Methods: Mean annual rainfall and soil temperature in the selected location are 153.46 mm and 19.6 oC, respectively. From geological point of view, the studied area is a part of west and south west zones and Flysch zone of east Iran. Soil temperature and moisture regimes of this part are thermic and aridic, respectively. Eight representative pedons on different surfaces including rock pediment, mantled pediment, Alluvial fan and Upper terraces were selected, sampled, and described. Routine physicochemical analyses, clay mineralogy, and micromorphological observations performed on soil samples. Soil reaction, texture, electrical conductivity, calcium carbonate, and gypsum were identified. Four samples including Bt horizon of pedon 1, Bk1 horizon of pedon 4, By2 horizon of pedon 5 and Bk1 horizon of pedon 7 were selected for clay mineralogy investigations. Four slides including Mg saturated, Mg saturated treated with ethylene glycol, K saturated, and K saturated heated up to 550 oC were analyzed. A Brucker X-Ray diffractometer at 40 kV and 30 mA was used for XRD analyses. Undisturbed soil samples from Bt horizon of pedon 1, Bk2 horizon of pedon 2, Btn horizon of pedon 3, By2 horizon of pedon 5, Bk1 horizon of pedon 7, and By1 horizon of pedon 8 were selected for micromorphological observations. A vestapol resin with stearic acid and cobalt as hardener was used for soil impregnation. Bk-Pol petrographic microscope was used for micromorphology investigations. Results and Discussion: Due to

Movement of Irrigation Water in Soil from a Surface Emitter

Directory of Open Access Journals (Sweden)

Ibrahim Abbas Dawood

2016-09-01

Full Text Available rickle irrigation is one of the most conservative irrigation techniques since it implies supplying water directly on the soil through emitters. Emitters dissipate energy of water at the end of the trickle irrigation system and provide water at emission points. The area wetted by an emitter depends upon the discharge of emitter, soil texture, initial soil water content, and soil permeability. The objectives of this research were to predict water distribution profiles through different soils for different conditions and quantify the distribution profiles in terms of main characteristics of soil and emitter. The wetting patterns were simulated at the end of each hour for a total time of application of 12 hrs, emitter discharges of 0.5, 0.75, 1, 2, 3, 4, and 5 lph, and five initial volumetric soil water contents. Simulation of water flow from a single surface emitter was carried out by using the numerically-based software Hydrus-2D/3D, Version 2.04. Two approaches were used in developing formulas to predict the domains of the wetted pattern. In order to verify the results obtained by implementing the software Hydrus-2D/3D a field experiment was conducted to measure the wetted diameter and compare measured values with simulated ones. The results of the research showed that the developed formulas to express the wetted diameter and depth in terms of emitter discharge, time of application, and initial soil water content are very general and can be used with very good accuracy.

A decision-making process on cleanup of contaminated surface soil

International Nuclear Information System (INIS)

Yasuda, Hiroshi

1996-01-01

This study presents principles for determining derived intervention levels (DILs) for surface soil cleanup. The people concerned were divided into major three groups: residents, responsible parties, and cleanup workers; it was considered that each group has different interests. The DILs for soil cleanup were determined from the viewpoints of these three groups: safety of residence, advantages of the countermeasures, and safety of cleanup activities, respectively. An example process for determination of the DILs in accordance with the principles was also presented for a site contaminated by 137 Cs. This decision-making frame is expected to be applicable to other contaminants. (author)

Relationship between metal speciation in soil solution and metal adsorption at the root surface of ryegrass.

Science.gov (United States)

Kalis, Erwin J J; Temminghoff, Erwin J M; Town, Raewyn M; Unsworth, Emily R; van Riemsdijk, Willem H

2008-01-01

The total metal content of the soil or total metal concentration in the soil solution is not always a good indicator for metal availability to plants. Therefore, several speciation techniques have been developed that measure a defined fraction of the total metal concentration in the soil solution. In this study the Donnan Membrane Technique (DMT) was used to measure free metal ion concentrations in CaCl(2) extractions (to mimic the soil solution, and to work under standardized conditions) of 10 different soils, whereas diffusive gradients in thin-films (DGT) and scanning chronopotentiometry (SCP) were used to measure the sum of free and labile metal concentrations in the CaCl(2) extracts. The DGT device was also exposed directly to the (wetted) soil (soil-DGT). The metal concentrations measured with the speciation techniques are related to the metal adsorption at the root surface of ryegrass (Lolium perenne L.), to be able to subsequently predict metal uptake. In most cases the metal adsorption related pH-dependently to the metal concentrations measured by DMT, SCP, and DGT in the CaCl(2) extract. However, the relationship between metal adsorption at the root surface and the metal concentrations measured by the soil-DGT was not-or only slightly-pH dependent. The correlations between metal adsorption at the root surface and metal speciation detected by different speciation techniques allow discussion about rate limiting steps in biouptake and the contribution of metal complexes to metal bioavailability.

Behavior of Ag nanoparticles in soil: Effects of particle surface coating, aging and sewage sludge amendment

International Nuclear Information System (INIS)

Whitley, Annie R.; Levard, Clément; Oostveen, Emily; Bertsch, Paul M.; Matocha, Chris J.; Kammer, Frank von der; Unrine, Jason M.

2013-01-01

This study addressed the relative importance of particle coating, sewage sludge amendment, and aging on aggregation and dissolution of manufactured Ag nanoparticles (Ag MNPs) in soil pore water. Ag MNPs with citrate (CIT) or polyvinylpyrrolidone (PVP) coatings were incubated with soil or municipal sewage sludge which was then amended to soil (1% or 3% sludge (w/w)). Pore waters were extracted after 1 week and 2 and 6 months and analyzed for chemical speciation, aggregation state and dissolution. Ag MNP coating had profound effects on aggregation state and partitioning to pore water in the absence of sewage sludge, but pre-incubation with sewage sludge negated these effects. This suggests that Ag MNP coating does not need to be taken into account to understand fate of AgMNPs applied to soil through biosolids amendment. Aging of soil also had profound effects that depended on Ag MNP coating and sludge amendment. -- Highlights: •Silver nanoparticle coating affects fate in unamended soils. •Citrated coated silver nanoparticles could be found in pore water for up to six months. •Pre-incubation of silver nanoparticles in sewage sludge negated effects of surface coating. •Weathered or reprecipitated particles found in pore water for up to two months in sludge amended soils. •Particle surface coating, sewage sludge amendment and aging all have important impacts. -- Behavior of manufactured silver nanoparticles in soil depends on surface coating, contact with sewage sludge, and aging

Estimating the amount and distribution of radon flux density from the soil surface in China

International Nuclear Information System (INIS)

Zhuo Weihai; Guo Qiuju; Chen Bo; Cheng Guan

2008-01-01

Based on an idealized model, both the annual and the seasonal radon ( 222 Rn) flux densities from the soil surface at 1099 sites in China were estimated by linking a database of soil 226 Ra content and a global ecosystems database. Digital maps of the 222 Rn flux density in China were constructed in a spatial resolution of 25 km x 25 km by interpolation among the estimated data. An area-weighted annual average 222 Rn flux density from the soil surface across China was estimated to be 29.7 ± 9.4 mBq m -2 s -1 . Both regional and seasonal variations in the 222 Rn flux densities are significant in China. Annual average flux densities in the southeastern and northwestern China are generally higher than those in other regions of China, because of high soil 226 Ra content in the southeastern area and high soil aridity in the northwestern one. The seasonal average flux density is generally higher in summer/spring than winter, since relatively higher soil temperature and lower soil water saturation in summer/spring than other seasons are common in China

High-resolution, real-time mapping of surface soil moisture at the field scale using ground penetrating radar

Science.gov (United States)

Lambot, S.; Minet, J.; Slob, E.; Vereecken, H.; Vanclooster, M.

2008-12-01

Measuring soil surface water content is essential in hydrology and agriculture as this variable controls important key processes of the hydrological cycle such as infiltration, runoff, evaporation, and energy exchanges between the earth and the atmosphere. We present a ground-penetrating radar (GPR) method for automated, high-resolution, real-time mapping of soil surface dielectric permittivity and correlated water content at the field scale. Field scale characterization and monitoring is not only necessary for field scale management applications, but also for unravelling upscaling issues in hydrology and bridging the scale gap between local measurements and remote sensing. In particular, such methods are necessary to validate and improve remote sensing data products. The radar system consists of a vector network analyzer combined with an off-ground, ultra-wideband monostatic horn antenna, thereby setting up a continuous-wave steeped-frequency GPR. Radar signal analysis is based on three-dimensional electromagnetic inverse modelling. The forward model accounts for all antenna effects, antenna-soil interactions, and wave propagation in three-dimensional multilayered media. A fast procedure was developed to evaluate the involved Green's function, resulting from a singular, complex integral. Radar data inversion is focused on the surface reflection in the time domain. The method presents considerable advantages compared to the current surface characterization methods using GPR, namely, the ground wave and common reflection methods. Theoretical analyses were performed, dealing with the effects of electric conductivity on the surface reflection when non-negligible, and on near-surface layering, which may lead to unrealistic values for the surface dielectric permittivity if not properly accounted for. Inversion strategies are proposed. In particular the combination of GPR with electromagnetic induction data appears to be promising to deal with highly conductive soils

Near-saturated surface soil hydraulic properties under different land uses in the St Denis National Wildlife Area, Saskatchewan, Canada

Science.gov (United States)

Bodhinayake, Waduwawatte; Si, Bing Cheng

2004-10-01

Surface soil hydraulic properties are key factors controlling the partition of rainfall and snowmelt into runoff and soil water storage, and their knowledge is needed for sound land management. The objective of this study was to evaluate the effects of three land uses (native grass, brome grass and cultivated) on surface soil hydraulic properties under near-saturated conditions at the St Denis National Wildlife Area, Saskatchewan, Canada. For each land use, water infiltration rates were measured using double-ring and tension infiltrometers at -0.3, -0.7, -1.5 and -2.2 kPa pressure heads. Macroporosity and unsaturated hydraulic properties of the surface soil were estimated. Mean field-saturated hydraulic conductivity (Kfs), unsaturated hydraulic conductivity at -0.3 kPa pressure head, inverse capillary length scale () and water-conducting macroporosity were compared for different land uses. These parameters of the native grass and brome grass sites were significantly (p 1.36 × 10-4 m in diameter in the three land uses. Land use modified near-saturated hydraulic properties of surface soil and consequently may alter the water balance of the area by changing the amount of surface runoff and soil water storage.

[Effects of soil crusts on surface hydrology in the semiarid Loess hilly area].

Science.gov (United States)

Wei, Wei; Wen, Zhi; Chen, Li-Ding; Chen, Jin; Wu, Dong-Ping

2012-11-01

Soil crusts are distributed extensively in the Chinese Loess Plateau and play key roles in surface hydrological processes. In this study, a typical loess hilly region in Anjiagou catchment, Dingxi city, Gansu province was selected as the study region, and soil crusts in the catchment were investigated. Then, the hydrological effect of soil crusts was studied by using multi-sampling and hydrological monitoring experiments. Several key results were shown as follows. Firstly, compared with bared soil without crust cover, soil crusts can greatly reduce the bulk density, improve the porosity of soil, and raise the holding capacity of soil moisture which ranges from 1.4 to 1.9 times of that of bared soil. Secondly, the role of soil crust on rainfall interception was very significant. Moss crust was found to be strongest on rainfall interception, followed by synantectic crusts and lichen crusts. Bared soil without covering crusts was poorest in resisting rainfall splash. Thirdly, hydrological simulation experiments indicate that soil crusts play a certain positive role in promoting the water infiltration capacity, and the mean infiltration rate of the crusted soil was 2 times higher than that of the no-crust covered soils. While the accumulated infiltrated water amounts was also far higher than that of the bared soil.

Impact of soil moisture initialization on boreal summer subseasonal forecasts: mid-latitude surface air temperature and heat wave events

Science.gov (United States)

Seo, Eunkyo; Lee, Myong-In; Jeong, Jee-Hoon; Koster, Randal D.; Schubert, Siegfried D.; Kim, Hye-Mi; Kim, Daehyun; Kang, Hyun-Suk; Kim, Hyun-Kyung; MacLachlan, Craig; Scaife, Adam A.

2018-05-01

This study uses a global land-atmosphere coupled model, the land-atmosphere component of the Global Seasonal Forecast System version 5, to quantify the degree to which soil moisture initialization could potentially enhance boreal summer surface air temperature forecast skill. Two sets of hindcast experiments are performed by prescribing the observed sea surface temperature as the boundary condition for a 15-year period (1996-2010). In one set of the hindcast experiments (noINIT), the initial soil moisture conditions are randomly taken from a long-term simulation. In the other set (INIT), the initial soil moisture conditions are taken from an observation-driven offline Land Surface Model (LSM) simulation. The soil moisture conditions from the offline LSM simulation are calibrated using the forecast model statistics to minimize the inconsistency between the LSM and the land-atmosphere coupled model in their mean and variability. Results show a higher boreal summer surface air temperature prediction skill in INIT than in noINIT, demonstrating the potential benefit from an accurate soil moisture initialization. The forecast skill enhancement appears especially in the areas in which the evaporative fraction—the ratio of surface latent heat flux to net surface incoming radiation—is sensitive to soil moisture amount. These areas lie in the transitional regime between humid and arid climates. Examination of the extreme 2003 European and 2010 Russian heat wave events reveal that the regionally anomalous soil moisture conditions during the events played an important role in maintaining the stationary circulation anomalies, especially those near the surface.

Nitrifier-induced denitrification is an important source of soil nitrous oxide and can be inhibited by a nitrification inhibitor 3,4-dimethylpyrazole phosphate.

Science.gov (United States)

Shi, Xiuzhen; Hu, Hang-Wei; Zhu-Barker, Xia; Hayden, Helen; Wang, Juntao; Suter, Helen; Chen, Deli; He, Ji-Zheng

2017-12-01

Soil ecosystem represents the largest contributor to global nitrous oxide (N 2 O) production, which is regulated by a wide variety of microbial communities in multiple biological pathways. A mechanistic understanding of these N 2 O production biological pathways in complex soil environment is essential for improving model performance and developing innovative mitigation strategies. Here, combined approaches of the 15 N- 18 O labelling technique, transcriptome analysis, and Illumina MiSeq sequencing were used to identify the relative contributions of four N 2 O pathways including nitrification, nitrifier-induced denitrification (nitrifier denitrification and nitrification-coupled denitrification) and heterotrophic denitrification in six soils (alkaline vs. acid soils). In alkaline soils, nitrification and nitrifier-induced denitrification were the dominant pathways of N 2 O production, and application of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) significantly reduced the N 2 O production from these pathways; this is probably due to the observed reduction in the expression of the amoA gene in ammonia-oxidizing bacteria (AOB) in the DMPP-amended treatments. In acid soils, however, heterotrophic denitrification was the main source for N 2 O production, and was not impacted by the application of DMPP. Our results provide robust evidence that the nitrification inhibitor DMPP can inhibit the N 2 O production from nitrifier-induced denitrification, a potential significant source of N 2 O production in agricultural soils. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

Microwhip scorpions (Palpigradi) feed on heterotrophic cyanobacteria in Slovak caves - a curiosity among Arachnida

Czech Academy of Sciences Publication Activity Database

Smrž, J.; Kováč, L.; Mikeš, J.; Lukešová, Alena

2013-01-01