WorldWideScience

Sample records for super-resolved surface reconstruction

  1. Super-resolved terahertz microscopy by knife-edge scan

    Science.gov (United States)

    Giliberti, V.; Flammini, M.; Ciano, C.; Pontecorvo, E.; Del Re, E.; Ortolani, M.

    2017-08-01

    We present a compact, all solid-state THz confocal microscope operating at 0.30 THz that achieves super-resolution by using the knife-edge scan approach. In the final reconstructed image, a lateral resolution of 60 μm ≍ λ/17 is demonstrated when the knife-edge is deep in the near-field of the sample surface. When the knife-edge is lifted up to λ/4 from the sample surface, a certain degree of super-resolution is maintained with a resolution of 0.4 mm, i.e. more than a factor 2 if compared to the diffraction-limited scheme. The present results open an interesting path towards super-resolved imaging with in-depth information that would be peculiar to THz microscopy systems.

  2. Photometric Lunar Surface Reconstruction

    Science.gov (United States)

    Nefian, Ara V.; Alexandrov, Oleg; Morattlo, Zachary; Kim, Taemin; Beyer, Ross A.

    2013-01-01

    Accurate photometric reconstruction of the Lunar surface is important in the context of upcoming NASA robotic missions to the Moon and in giving a more accurate understanding of the Lunar soil composition. This paper describes a novel approach for joint estimation of Lunar albedo, camera exposure time, and photometric parameters that utilizes an accurate Lunar-Lambertian reflectance model and previously derived Lunar topography of the area visualized during the Apollo missions. The method introduced here is used in creating the largest Lunar albedo map (16% of the Lunar surface) at the resolution of 10 meters/pixel.

  3. Polaron-Driven Surface Reconstructions

    Directory of Open Access Journals (Sweden)

    Michele Reticcioli

    2017-09-01

    Full Text Available Geometric and electronic surface reconstructions determine the physical and chemical properties of surfaces and, consequently, their functionality in applications. The reconstruction of a surface minimizes its surface free energy in otherwise thermodynamically unstable situations, typically caused by dangling bonds, lattice stress, or a divergent surface potential, and it is achieved by a cooperative modification of the atomic and electronic structure. Here, we combined first-principles calculations and surface techniques (scanning tunneling microscopy, non-contact atomic force microscopy, scanning tunneling spectroscopy to report that the repulsion between negatively charged polaronic quasiparticles, formed by the interaction between excess electrons and the lattice phonon field, plays a key role in surface reconstructions. As a paradigmatic example, we explain the (1×1 to (1×2 transition in rutile TiO_{2}(110.

  4. Plasmon-Assisted Selective and Super-Resolving Excitation of Individual Quantum Emitters on a Metal Nanowire.

    Science.gov (United States)

    Li, Qiang; Pan, Deng; Wei, Hong; Xu, Hongxing

    2018-03-14

    Hybrid systems composed of multiple quantum emitters coupled with plasmonic waveguides are promising building blocks for future integrated quantum nanophotonic circuits. The techniques that can super-resolve and selectively excite contiguous quantum emitters in a diffraction-limited area are of great importance for studying the plasmon-mediated interaction between quantum emitters and manipulating the single plasmon generation and propagation in plasmonic circuits. Here we show that multiple quantum dots coupled with a silver nanowire can be controllably excited by tuning the interference field of surface plasmons on the nanowire. Because of the period of the interference pattern is much smaller than the diffraction limit, we demonstrate the selective excitation of two quantum dots separated by a distance as short as 100 nm. We also numerically demonstrate a new kind of super-resolution imaging method that combines the tunable surface plasmon interference pattern on the NW with the structured illumination microscopy technique. Our work provides a novel high-resolution optical excitation and imaging method for the coupled systems of multiple quantum emitters and plasmonic waveguides, which adds a new tool for studying and manipulating single quantum emitters and single plasmons for quantum plasmonic circuitry applications.

  5. Extended Reconstructed Sea Surface Temperature (ERSST)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Extended Reconstructed Sea Surface Temperature (ERSST) dataset is a global monthly sea surface temperature analysis derived from the International Comprehensive...

  6. Ocular Surface Reconstruction: Recent Innovations

    Directory of Open Access Journals (Sweden)

    Madhavan HN

    2009-01-01

    protocol of LSCD patients. Autologous limbal transplantation Despite its success, its utility is limited. the requirement for a sizable limbal donation; up to 30-40% must be harvested from the contralateral donor eye and its harvest may theoretically harm the structural integrity, cause subclinical LSCD or cryptogenic changes in the donor eye. Ex vivo expansion and cultivation techniques for autologous limbal stem cells are being actively investigated. , the use of human AM for ocular surface regeneration (OSR and as a growth support substrate for ex vivo expansion of autologous corneal equivalent epithelial cells and their successful OSR in animal cornea model, as well as human, was reported. The conventional cultivation methods for corneal epithelial tissues for clinical transplantation applications involve utilization of xenobiotic materials such as fetal bovine serum (FBS and murine-derived feeder cells. FBS-free culture systems have been developed to reduce the risk of zoonotic infection, but these have the disadvantage of reduced efficacy for cell propagation. it must be emphasized that AMT is not a substitution for LSCT and AMT should not be performed when true LSCD exists because AM only provides a supportive matrix for the limbal stem cells to migrate, proliferate and restore the corneal surface. There are several disadvantages of AMT and LSCT technique. This delicate procedure requires technical skill for the preparation of AM with attached corneal epithelial cells and surgical dexterity to manipulate the AM onto the ocular surface.A rabbit model for transplantation of cultivated corneal limbal stem cells onto corneal stem cell deficient animals was developed & its results are very encouraging for similar studies in human corneal surface reconstruction. Our investigations indicated that Ex vivo cultivation of human corneal limbal stem cells (HCLSC occurred with ease in the thermoresponsive biodegradable gel - “Mebiol Gel”. The growth rate within Mebiol Gel

  7. Reconstruction of convex bodies from surface tensors

    DEFF Research Database (Denmark)

    Kousholt, Astrid; Kiderlen, Markus

    We present two algorithms for reconstruction of the shape of convex bodies in the two-dimensional Euclidean space. The first reconstruction algorithm requires knowledge of the exact surface tensors of a convex body up to rank s for some natural number s. The second algorithm uses harmonic intrinsic...... volumes which are certain values of the surface tensors and allows for noisy measurements. From a generalized version of Wirtinger's inequality, we derive stability results that are utilized to ensure consistency of both reconstruction procedures. Consistency of the reconstruction procedure based...

  8. Matching Images to Models: Camera Calibration for 3-D Surface Reconstruction

    Science.gov (United States)

    Morris, Robin D.; Smelyanskiy, Vadim N.; Cheeseman. Peter C.; Norvig, Peter (Technical Monitor)

    2001-01-01

    In a previous paper we described a system which recursively recovers a super-resolved three dimensional surface model from a set of images of the surface. In that paper we assumed that the camera calibration for each image was known. In this paper we solve two problems. Firstly, if an estimate of the surface is already known, the problem is to calibrate a new image relative to the existing surface model. Secondly, if no surface estimate is available, the relative camera calibration between the images in the set must be estimated. This will allow an initial surface model to be estimated. Results of both types of estimation are given.

  9. Reconstruction of convex bodies from surface tensors

    DEFF Research Database (Denmark)

    Kousholt, Astrid; Kiderlen, Markus

    2016-01-01

    We present two algorithms for reconstruction of the shape of convex bodies in the two-dimensional Euclidean space. The first reconstruction algorithm requires knowledge of the exact surface tensors of a convex body up to rank s for some natural number s. When only measurements subject to noise...... of surface tensors are available for reconstruction, we recommend to use certain values of the surface tensors, namely harmonic intrinsic volumes instead of the surface tensors evaluated at the standard basis. The second algorithm we present is based on harmonic intrinsic volumes and allows for noisy...... measurements. From a generalized version of Wirtinger's inequality, we derive stability results that are utilized to ensure consistency of both reconstruction procedures. Consistency of the reconstruction procedure based on measurements subject to noise is established under certain assumptions on the noise...

  10. Anatomically Plausible Surface Alignment and Reconstruction

    DEFF Research Database (Denmark)

    Paulsen, Rasmus R.; Larsen, Rasmus

    2010-01-01

    With the increasing clinical use of 3D surface scanners, there is a need for accurate and reliable algorithms that can produce anatomically plausible surfaces. In this paper, a combined method for surface alignment and reconstruction is proposed. It is based on an implicit surface representation...

  11. Quantitative analyses of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy.

    Science.gov (United States)

    Schmid, Volker J; Cremer, Marion; Cremer, Thomas

    2017-07-01

    Recent advancements of super-resolved fluorescence microscopy have revolutionized microscopic studies of cells, including the exceedingly complex structural organization of cell nuclei in space and time. In this paper we describe and discuss tools for (semi-) automated, quantitative 3D analyses of the spatial nuclear organization. These tools allow the quantitative assessment of highly resolved different chromatin compaction levels in individual cell nuclei, which reflect functionally different regions or sub-compartments of the 3D nuclear landscape, and measurements of absolute distances between sites of different chromatin compaction. In addition, these tools allow 3D mapping of specific DNA/RNA sequences and nuclear proteins relative to the 3D chromatin compaction maps and comparisons of multiple cell nuclei. The tools are available in the free and open source R packages nucim and bioimagetools. We discuss the use of masks for the segmentation of nuclei and the use of DNA stains, such as DAPI, as a proxy for local differences in chromatin compaction. We further discuss the limitations of 3D maps of the nuclear landscape as well as problems of the biological interpretation of such data. Copyright © 2017 Elsevier Inc. All rights reserved.

  12. Reconstruction of convex bodies from surface tensors

    DEFF Research Database (Denmark)

    Kousholt, Astrid; Kiderlen, Markus

    . The output of the reconstruction algorithm is a polytope P, where the surface tensors of P and K are identical up to rank s. We establish a stability result based on a generalization of Wirtinger’s inequality that shows that for large s, two convex bodies are close in shape when they have identical surface...... that are translates of each other. An algorithm for reconstructing an unknown convex body in R 2 from its surface tensors up to a certain rank is presented. Using the reconstruction algorithm, the shape of an unknown convex body can be approximated when only a finite number s of surface tensors are available...... tensors up to rank s. This is used to establish consistency of the developed reconstruction algorithm....

  13. The structure of reconstructed chalcopyrite surfaces

    Science.gov (United States)

    Thinius, Sascha; Islam, Mazharul M.; Bredow, Thomas

    2018-03-01

    Chalcopyrite (CuFeS2) surfaces are of major interest for copper exploitation in aqueous solution, called leaching. Since leaching is a surface process knowledge of the surface structure, bonding pattern and oxidation states is important for improving the efficiency. At present such information is not available from experimental studies. Therefore a detailed computational study of chalcopyrite surfaces is performed. The structures of low-index stoichiometric chalcopyrite surfaces {hkl} h, k, l ∈ {0, 1, 2} have been studied with density functional theory (DFT) and global optimization strategies. We have applied ab initio molecular dynamics (MD) in combination with simulated annealing (SA) in order to explore possible reconstructions via a minima hopping (MH) algorithm. In almost all cases reconstruction involving substantial rearrangement has occurred accompanied by reduction of the surface energy. The analysis of the change in the coordination sphere and migration during reconstruction reveals that S-S dimers are formed on the surface. Further it was observed that metal atoms near the surface move toward the bulk forming metal alloys passivated by sulfur. The obtained surface energies of reconstructed surfaces are in the range of 0.53-0.95 J/m2.

  14. Diffusion of particles adsorbed on reconstructive surface

    Czech Academy of Sciences Publication Activity Database

    Tarasenko A., Nataliya; Tarasenko, Alexander; Jastrabík, Lubomír

    2005-01-01

    Roč. 11, č. 1 (2005), s. 485-489 ISSN 0929-5607 R&D Projects: GA MŠk LN00A015 Institutional research plan: CEZ:AV0Z10100522 Keywords : lattice gas * surface reconstruction * surface diffusion * phase transitions Subject RIV: BM - Solid Matter Physics ; Magnetism Impact factor: 1.323, year: 2005

  15. Thin film surface reconstruction analysis

    Energy Technology Data Exchange (ETDEWEB)

    Imperatori, P [CNR, Monterotondo Stazione, Rome (Italy). Istituto di Chimica dei materiali

    1996-09-01

    The study of the atomic structure of surfaces and interfaces is a fundamental step in the knowledge and the development of new materials. Among the several surface-sensitive techniques employed to characterise the atomic arrangements, grazing incidence x-ray diffraction (GIXD) is one of the most powerful. With a simple data treatment, based on the kinematical theory, and using the classical methods of x-ray bulk structure determination, it gives the atomic positions of atoms at a surface or an interface and the atomic displacements of subsurface layers for a complete determination of the structure. In this paper the main features of the technique will be briefly reviewed and selected of application to semiconductor and metal surfaces will be discussed.

  16. Silicon and Germanium (111) Surface Reconstruction

    Science.gov (United States)

    Hao, You Gong

    Silicon (111) surface (7 x 7) reconstruction has been a long standing puzzle. For the last twenty years, various models were put forward to explain this reconstruction, but so far the problem still remains unsolved. Recent ion scattering and channeling (ISC), scanning tunneling microscopy (STM) and transmission electron diffraction (TED) experiments reveal some new results about the surface which greatly help investigators to establish better models. This work proposes a silicon (111) surface reconstruction mechanism, the raising and lowering mechanism which leads to benzene -like ring and flower (raised atom) building units. Based on these building units a (7 x 7) model is proposed, which is capable of explaining the STM and ISC experiment and several others. Furthermore the building units of the model can be used naturally to account for the germanium (111) surface c(2 x 8) reconstruction and other observed structures including (2 x 2), (5 x 5) and (7 x 7) for germanium as well as the (/3 x /3)R30 and (/19 x /19)R23.5 impurity induced structures for silicon, and the higher temperature disordered (1 x 1) structure for silicon. The model is closely related to the silicon (111) surface (2 x 1) reconstruction pi-bonded chain model, which is the most successful model for the reconstruction now. This provides an explanation for the rather low conversion temperature (560K) of the (2 x 1) to the (7 x 7). The model seems to meet some problems in the explanation of the TED result, which is explained very well by the dimer, adatom and stacking fault (DAS) model proposed by Takayanagi. In order to explain the TED result, a variation of the atomic scattering factor is proposed. Comparing the benzene-like ring model with the DAS model, the former needs more work to explain the TED result and the later has to find a way to explain the silicon (111) surface (1 x 1) disorder experiment.

  17. Step patterns on vicinal reconstructed surfaces

    Science.gov (United States)

    Vilfan, Igor

    1996-04-01

    Step patterns on vicinal (2 × 1) reconstructed surfaces of noble metals Au(110) and Pt(110), miscut towards the (100) orientation, are investigated. The free energy of the reconstructed surface with a network of crossing opposite steps is calculated in the strong chirality regime when the steps cannot make overhangs. It is explained why the steps are not perpendicular to the direction of the miscut but form in equilibrium a network of crossing steps which make the surface to look like a fish skin. The network formation is the consequence of competition between the — predominantly elastic — energy loss and entropy gain. It is in agreement with recent scanning tunnelling microscopy observations on vicinal Au(110) and Pt(110) surfaces.

  18. Overlapping constraint for variational surface reconstruction

    DEFF Research Database (Denmark)

    Aanæs, Henrik; Solem, J.E.

    2005-01-01

    In this paper a counter example, illustrating a shortcoming in most variational formulations for 3D surface estimation, is presented. The nature of this shortcoming is a lack of an overlapping constraint. A remedy for this shortcoming is presented in the form of a penalty function with an analysi...... of the effects of this function on surface motion. For practical purposes, this will only have minor influence on current methods. However, the insight provided in the analysis is likely to influence future developments in the field of variational surface reconstruction....

  19. Tomographic reconstruction with B-splines surfaces

    International Nuclear Information System (INIS)

    Oliveira, Eric F.; Dantas, Carlos C.; Melo, Silvio B.; Mota, Icaro V.; Lira, Mailson

    2011-01-01

    Algebraic reconstruction techniques when applied to a limited number of data usually suffer from noise caused by the process of correction or by inconsistencies in the data coming from the stochastic process of radioactive emission and oscillation equipment. The post - processing of the reconstructed image with the application of filters can be done to mitigate the presence of noise. In general these processes also attenuate the discontinuities present in edges that distinguish objects or artifacts, causing excessive blurring in the reconstructed image. This paper proposes a built-in noise reduction at the same time that it ensures adequate smoothness level in the reconstructed surface, representing the unknowns as linear combinations of elements of a piecewise polynomial basis, i.e. a B-splines basis. For that, the algebraic technique ART is modified to accommodate the first, second and third degree bases, ensuring C 0 , C 1 and C 2 smoothness levels, respectively. For comparisons, three methodologies are applied: ART, ART post-processed with regular B-splines filters (ART*) and the proposed method with the built-in B-splines filter (BsART). Simulations with input data produced from common mathematical phantoms were conducted. For the phantoms used the BsART method consistently presented the smallest errors, among the three methods. This study has shown the superiority of the change made to embed the filter in the ART when compared to the post-filtered ART. (author)

  20. Reconstruction of freeform surfaces for metrology

    International Nuclear Information System (INIS)

    El-Hayek, N; Nouira, H; Anwer, N; Damak, M; Gibaru, O

    2014-01-01

    The application of freeform surfaces has increased since their complex shapes closely express a product's functional specifications and their machining is obtained with higher accuracy. In particular, optical surfaces exhibit enhanced performance especially when they take aspheric forms or more complex forms with multi-undulations. This study is mainly focused on the reconstruction of complex shapes such as freeform optical surfaces, and on the characterization of their form. The computer graphics community has proposed various algorithms for constructing a mesh based on the cloud of sample points. The mesh is a piecewise linear approximation of the surface and an interpolation of the point set. The mesh can further be processed for fitting parametric surfaces (Polyworks ® or Geomagic ® ). The metrology community investigates direct fitting approaches. If the surface mathematical model is given, fitting is a straight forward task. Nonetheless, if the surface model is unknown, fitting is only possible through the association of polynomial Spline parametric surfaces. In this paper, a comparative study carried out on methods proposed by the computer graphics community will be presented to elucidate the advantages of these approaches. We stress the importance of the pre-processing phase as well as the significance of initial conditions. We further emphasize the importance of the meshing phase by stating that a proper mesh has two major advantages. First, it organizes the initially unstructured point set and it provides an insight of orientation, neighbourhood and curvature, and infers information on both its geometry and topology. Second, it conveys a better segmentation of the space, leading to a correct patching and association of parametric surfaces

  1. Super-resolved linear fluorescence localization microscopy using photostable fluorophores: A virtual microscopy study

    Science.gov (United States)

    Birk, Udo; Szczurek, Aleksander; Cremer, Christoph

    2017-12-01

    Current approaches to overcome the conventional limit of the resolution potential of light microscopy (of about 200 nm for visible light), often suffer from non-linear effects, which render the quantification of the image intensities in the reconstructions difficult, and also affect the quantification of the biological structure under investigation. As an attempt to face these difficulties, we discuss a particular method of localization microscopy which is based on photostable fluorescent dyes. The proposed method can potentially be implemented as a fast alternative for quantitative localization microscopy, circumventing the need for the acquisition of thousands of image frames and complex, highly dye-specific imaging buffers. Although the need for calibration remains in order to extract quantitative data (such as the number of emitters), multispectral approaches are largely facilitated due to the much less stringent requirements on imaging buffers. Furthermore, multispectral acquisitions can be readily obtained using commercial instrumentation such as e.g. the conventional confocal laser scanning microscope.

  2. NOAA Extended Reconstructed Sea Surface Temperature (ERSST), Version 5

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The NOAA Extended Reconstructed Sea Surface Temperature (ERSST) dataset is a global monthly sea surface temperature dataset derived from the International...

  3. Extended Reconstructed Sea Surface Temperature (ERSST), Version 4

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Extended Reconstructed Sea Surface Temperature (ERSST) dataset is a global monthly sea surface temperature analysis on a 2x2 degree grid derived from the...

  4. Flip-avoiding interpolating surface registration for skull reconstruction.

    Science.gov (United States)

    Xie, Shudong; Leow, Wee Kheng; Lee, Hanjing; Lim, Thiam Chye

    2018-03-30

    Skull reconstruction is an important and challenging task in craniofacial surgery planning, forensic investigation and anthropological studies. Existing methods typically reconstruct approximating surfaces that regard corresponding points on the target skull as soft constraints, thus incurring non-zero error even for non-defective parts and high overall reconstruction error. This paper proposes a novel geometric reconstruction method that non-rigidly registers an interpolating reference surface that regards corresponding target points as hard constraints, thus achieving low reconstruction error. To overcome the shortcoming of interpolating a surface, a flip-avoiding method is used to detect and exclude conflicting hard constraints that would otherwise cause surface patches to flip and self-intersect. Comprehensive test results show that our method is more accurate and robust than existing skull reconstruction methods. By incorporating symmetry constraints, it can produce more symmetric and normal results than other methods in reconstructing defective skulls with a large number of defects. It is robust against severe outliers such as radiation artifacts in computed tomography due to dental implants. In addition, test results also show that our method outperforms thin-plate spline for model resampling, which enables the active shape model to yield more accurate reconstruction results. As the reconstruction accuracy of defective parts varies with the use of different reference models, we also study the implication of reference model selection for skull reconstruction. Copyright © 2018 John Wiley & Sons, Ltd.

  5. Corneal surface reconstruction - a short review

    Directory of Open Access Journals (Sweden)

    Madhavan H N

    2009-01-01

    Full Text Available Cornea is the clear, dome-shaped surface that covers the front of the eye and when damage due to burns or injury and several other diseases, stem cells residing in its rim called "limbus" are stimulated to multiply to support growth of new epithelial cells over its surface. If this ready source of stem cells is damaged or destroyed the natural repair is not possible and such a condition is known as corneal limbal stem cell deficiency (CLSCD disease. Stem cell transplant helps such persons to regenerate the corneal surface. Human corneal limbal stem cell transplantation is at present an established procedure with reasonable good clinical outcome particularly when autologous limbal epithelial tissue from a fellow unaffected eye is used. 1, 2 A major concern related to the autograft is the possibility of CLSCD at the donor site, 3 techniques that allowed the expansion of a small limbal biopsy in the laboratory using cell cultures that could be then transplanted to the affected eye have been developed ,4, 5 Human amniotic membrane (HAM is used as a scaffold for both culturing the human limbal epithelial cells and for ocular surface reconstruction with the cultured limbal epithelial cells. 4-7 However, researchers have used alternative scaffolds like collagen 8, fibrin gel 9 and cross-linked gel of fibronectin and fibrin. 10 All these are biological materials and also need for animal 3T3 feeder layer for stem cell cultures. The properties of HAM are unique including antiadhesive effects, bacteriostatic effects, wound protection, pain reduction, and improvement of epithelialization and characteristically lacking imunogenicity. The use of amniotic membrane transplantation (AMT to treat ocular surface abnormalities was first reported by Graziella Pellegrini, chief of stem cell laboratory at Giovanni Paolo Hospital in Venice, Italy, who was the first to demonstrate the limbal stem cell transplant in 1997. Amniotic membrane has been successfully used in

  6. Predicting supramolecular self-assembly on reconstructed metal surfaces

    Science.gov (United States)

    Roussel, Thomas J.; Barrena, Esther; Ocal, Carmen; Faraudo, Jordi

    2014-06-01

    The prediction of supramolecular self-assembly onto solid surfaces is still challenging in many situations of interest for nanoscience. In particular, no previous simulation approach has been capable to simulate large self-assembly patterns of organic molecules over reconstructed surfaces (which have periodicities over large distances) due to the large number of surface atoms and adsorbing molecules involved. Using a novel simulation technique, we report here large scale simulations of the self-assembly patterns of an organic molecule (DIP) over different reconstructions of the Au(111) surface. We show that on particular reconstructions, the molecule-molecule interactions are enhanced in a way that long-range order is promoted. Also, the presence of a distortion in a reconstructed surface pattern not only induces the presence of long-range order but also is able to drive the organization of DIP into two coexisting homochiral domains, in quantitative agreement with STM experiments. On the other hand, only short range order is obtained in other reconstructions of the Au(111) surface. The simulation strategy opens interesting perspectives to tune the supramolecular structure by simulation design and surface engineering if choosing the right molecular building blocks and stabilising the chosen reconstruction pattern.The prediction of supramolecular self-assembly onto solid surfaces is still challenging in many situations of interest for nanoscience. In particular, no previous simulation approach has been capable to simulate large self-assembly patterns of organic molecules over reconstructed surfaces (which have periodicities over large distances) due to the large number of surface atoms and adsorbing molecules involved. Using a novel simulation technique, we report here large scale simulations of the self-assembly patterns of an organic molecule (DIP) over different reconstructions of the Au(111) surface. We show that on particular reconstructions, the molecule

  7. Reconstruction of Kinematic Surfaces from Scattered Data

    DEFF Research Database (Denmark)

    Randrup, Thomas; Pottmann, Helmut; Lee, I.-K.

    1998-01-01

    Given a surface in 3-space or scattered points from a surface, we present algorithms for fitting the data by a surface which can be generated by a one--parameter subgroup of the group of similarities. These surfaces are general cones and cylinders, surfaces of revolution, helical surfaces and spi...

  8. Surface Reconstruction and Image Enhancement via $L^1$-Minimization

    KAUST Repository

    Dobrev, Veselin

    2010-01-01

    A surface reconstruction technique based on minimization of the total variation of the gradient is introduced. Convergence of the method is established, and an interior-point algorithm solving the associated linear programming problem is introduced. The reconstruction algorithm is illustrated on various test cases including natural and urban terrain data, and enhancement oflow-resolution or aliased images. Copyright © by SIAM.

  9. Surface Reconstruction and Image Enhancement via $L^1$-Minimization

    KAUST Repository

    Dobrev, Veselin; Guermond, Jean-Luc; Popov, Bojan

    2010-01-01

    A surface reconstruction technique based on minimization of the total variation of the gradient is introduced. Convergence of the method is established, and an interior-point algorithm solving the associated linear programming problem is introduced

  10. Surface reconstruction through poisson disk sampling.

    Directory of Open Access Journals (Sweden)

    Wenguang Hou

    Full Text Available This paper intends to generate the approximate Voronoi diagram in the geodesic metric for some unbiased samples selected from original points. The mesh model of seeds is then constructed on basis of the Voronoi diagram. Rather than constructing the Voronoi diagram for all original points, the proposed strategy is to run around the obstacle that the geodesic distances among neighboring points are sensitive to nearest neighbor definition. It is obvious that the reconstructed model is the level of detail of original points. Hence, our main motivation is to deal with the redundant scattered points. In implementation, Poisson disk sampling is taken to select seeds and helps to produce the Voronoi diagram. Adaptive reconstructions can be achieved by slightly changing the uniform strategy in selecting seeds. Behaviors of this method are investigated and accuracy evaluations are done. Experimental results show the proposed method is reliable and effective.

  11. Epitaxial graphene-encapsulated surface reconstruction of Ge(110)

    Science.gov (United States)

    Campbell, Gavin P.; Kiraly, Brian; Jacobberger, Robert M.; Mannix, Andrew J.; Arnold, Michael S.; Hersam, Mark C.; Guisinger, Nathan P.; Bedzyk, Michael J.

    2018-04-01

    Understanding and engineering the properties of crystalline surfaces has been critical in achieving functional electronics at the nanoscale. Employing scanning tunneling microscopy, surface x-ray diffraction, and high-resolution x-ray reflectivity experiments, we present a thorough study of epitaxial graphene (EG)/Ge(110) and report a Ge(110) "6 × 2" reconstruction stabilized by the presence of epitaxial graphene unseen in group-IV semiconductor surfaces. X-ray studies reveal that graphene resides atop the surface reconstruction with a 0.34 nm van der Waals (vdW) gap and provides protection from ambient degradation.

  12. Surface reconstruction, figure-ground modulation, and border-ownership.

    Science.gov (United States)

    Jeurissen, Danique; Self, Matthew W; Roelfsema, Pieter R

    2013-01-01

    The Differentiation-Integration for Surface Completion (DISC) model aims to explain the reconstruction of visual surfaces. We find the model a valuable contribution to our understanding of figure-ground organization. We point out that, next to border-ownership, neurons in visual cortex code whether surface elements belong to a figure or the background and that this is influenced by attention. We furthermore suggest that there must be strong links between object recognition and figure-ground assignment in order to resolve the status of interior contours. Incorporation of these factors in neurocomputational models will further improve our understanding of surface reconstruction, figure-ground organization, and border-ownership.

  13. Inference-Based Surface Reconstruction of Cluttered Environments

    KAUST Repository

    Biggers, K.

    2012-08-01

    We present an inference-based surface reconstruction algorithm that is capable of identifying objects of interest among a cluttered scene, and reconstructing solid model representations even in the presence of occluded surfaces. Our proposed approach incorporates a predictive modeling framework that uses a set of user-provided models for prior knowledge, and applies this knowledge to the iterative identification and construction process. Our approach uses a local to global construction process guided by rules for fitting high-quality surface patches obtained from these prior models. We demonstrate the application of this algorithm on several example data sets containing heavy clutter and occlusion. © 2012 IEEE.

  14. Homotopy based Surface Reconstruction with Application to Acoustic Signals

    DEFF Research Database (Denmark)

    Sharma, Ojaswa; Anton, François

    2011-01-01

    reconstruct information between any pair of successive cross sections are derived. The zero level set of the resulting homotopy field generates the desired surface. Four types of homotopies are suggested that are well suited to generate a smooth surface. We also provide derivation of necessary higher order...

  15. Surface reconstruction, figure-ground modulation, and border-ownership

    NARCIS (Netherlands)

    Jeurissen, D.; Self, M.W.; Roelfsema, P.R.

    2013-01-01

    The Differentiation-Integration for Surface Completion (DISC) model aims to explain the reconstruction of visual surfaces. We find the model a valuable contribution to our understanding of figure-ground organization. We point out that, next to border-ownership, neurons in visual cortex code whether

  16. Surface reconstruction, figure-ground modulation, and border-ownership

    NARCIS (Netherlands)

    Jeurissen, Danique; Self, Matthew W.; Roelfsema, Pieter R.

    2013-01-01

    Abstract The Differentiation-Integration for Surface Completion (DISC) model aims to explain the reconstruction of visual surfaces. We find the model a valuable contribution to our understanding of figure-ground organization. We point out that, next to border-ownership, neurons in visual cortex code

  17. Surface Reconstruction from Parallel Curves with Application to Parietal Bone Fracture Reconstruction.

    Directory of Open Access Journals (Sweden)

    Abdul Majeed

    Full Text Available Maxillofacial trauma are common, secondary to road traffic accident, sports injury, falls and require sophisticated radiological imaging to precisely diagnose. A direct surgical reconstruction is complex and require clinical expertise. Bio-modelling helps in reconstructing surface model from 2D contours. In this manuscript we have constructed the 3D surface using 2D Computerized Tomography (CT scan contours. The fracture part of the cranial vault are reconstructed using GC1 rational cubic Ball curve with three free parameters, later the 2D contours are flipped into 3D with equidistant z component. The constructed surface is represented by contours blending interpolant. At the end of this manuscript a case report of parietal bone fracture is also illustrated by employing this method with a Graphical User Interface (GUI illustration.

  18. Elementary structural building blocks encountered in silicon surface reconstructions

    International Nuclear Information System (INIS)

    Battaglia, Corsin; Monney, Claude; Didiot, Clement; Schwier, Eike Fabian; Garnier, Michael Gunnar; Aebi, Philipp; Gaal-Nagy, Katalin; Onida, Giovanni

    2009-01-01

    Driven by the reduction of dangling bonds and the minimization of surface stress, reconstruction of silicon surfaces leads to a striking diversity of outcomes. Despite this variety even very elaborate structures are generally comprised of a small number of structural building blocks. We here identify important elementary building blocks and discuss their integration into the structural models as well as their impact on the electronic structure of the surface. (topical review)

  19. Inspection of freeform surfaces considering uncertainties in measurement, localization and surface reconstruction

    International Nuclear Information System (INIS)

    Mehrad, Vahid; Xue, Deyi; Gu, Peihua

    2013-01-01

    Inspection of a manufactured freeform surface can be conducted by building its surface model and comparing this manufactured surface model with the ideal design surface model and its tolerance requirement. The manufactured freeform surface model is usually achieved by obtaining measurement points on the manufactured surface, transforming these measurement points from the measurement coordinate system to the design coordinate system through localization, and reconstructing the surface model using the localized measurement points. In this research, a method was developed to estimate the locations and their variances of any selected points on the reconstructed freeform surface considering different sources of uncertainties in measurement, localization and surface reconstruction processes. In this method, first locations and variances of the localized measurement points are calculated considering uncertainties of the measurement points and uncertainties introduced in the localization processes. Then locations and variances of points on the reconstructed freeform surface are obtained considering uncertainties of the localized measurement points and uncertainties introduced in the freeform surface reconstruction process. Two case studies were developed to demonstrate how these three different uncertainty sources influence the quality of the reconstructed freeform curve and freeform surface in inspection. (paper)

  20. Implicit vessel surface reconstruction for visualization and CFD simulation

    International Nuclear Information System (INIS)

    Schumann, Christian; Peitgen, Heinz-Otto; Neugebauer, Mathias; Bade, Ragnar; Preim, Bernhard

    2008-01-01

    Accurate and high-quality reconstructions of vascular structures are essential for vascular disease diagnosis and blood flow simulations.These applications necessitate a trade-off between accuracy and smoothness. An additional requirement for the volume grid generation for Computational Fluid Dynamics (CFD) simulations is a high triangle quality. We propose a method that produces an accurate reconstruction of the vessel surface with satisfactory surface quality. A point cloud representing the vascular boundary is generated based on a segmentation result. Thin vessels are subsampled to enable an accurate reconstruction. A signed distance field is generated using Multi-level Partition of Unity Implicits and subsequently polygonized using a surface tracking approach. To guarantee a high triangle quality, the surface is remeshed. Compared to other methods, our approach represents a good trade-off between accuracy and smoothness. For the tested data, the average surface deviation to the segmentation results is 0.19 voxel diagonals and the maximum equi-angle skewness values are below 0.75. The generated surfaces are considerably more accurate than those obtained using model-based approaches. Compared to other model-free approaches, the proposed method produces smoother results and thus better supports the perception and interpretation of the vascular topology. Moreover, the triangle quality of the generated surfaces is suitable for CFD simulations. (orig.)

  1. Accuracy and reliability of three-dimensional surface reconstruction measurement

    International Nuclear Information System (INIS)

    Mizukami, Chikashi; Yamamoto, Etsuo; Ohmura, Masaki; Oiki, Hiroyuki; Tsuji, Jun; Muneta, Yuki; Tanabe, Makito; Hakuba, Nobuhiro; Azemoto, Syougo.

    1993-01-01

    We are using a new three-dimensional (3-D) surface reconstruction system to measure the temporal bones. This system offers the advantage of observation of the external aperture of the vestibular aqueduct and the porus acusticus internus in living subjects. However, its accuracy has not been confirmed. To investigate the accuracy of this new system, we measured the length of an in situ ceramic ossicular replacement prosthesis (CORP) of known length of 6.0 mm using 3-D surface reconstruction, conventional plain X-ray and polytomography. The CORP was scanned in the axial, sagittal and oblique directions. The mean measured length obtained with the 3-D surface reconstruction images was 5.94±0.21 on vertical scans, 5.91±0.27 on horizontal scans, and 6.01±0.25 on oblique scans. There were no significant differences among the measured lengths obtained in the three directions. Therefore, this 3-D surface reconstruction measurement system is considered to be reliable. Conversely, the mean measured length obtained by plain X-ray was 7.98±0.20, and by polytomography it was 7.94±0.23. These conventional methods have the inherent disadvantage of magnification of size which consequently requires correction. (author)

  2. Recent advances in 3D SEM surface reconstruction.

    Science.gov (United States)

    Tafti, Ahmad P; Kirkpatrick, Andrew B; Alavi, Zahrasadat; Owen, Heather A; Yu, Zeyun

    2015-11-01

    The scanning electron microscope (SEM), as one of the most commonly used instruments in biology and material sciences, employs electrons instead of light to determine the surface properties of specimens. However, the SEM micrographs still remain 2D images. To effectively measure and visualize the surface attributes, we need to restore the 3D shape model from the SEM images. 3D surface reconstruction is a longstanding topic in microscopy vision as it offers quantitative and visual information for a variety of applications consisting medicine, pharmacology, chemistry, and mechanics. In this paper, we attempt to explain the expanding body of the work in this area, including a discussion of recent techniques and algorithms. With the present work, we also enhance the reliability, accuracy, and speed of 3D SEM surface reconstruction by designing and developing an optimized multi-view framework. We then consider several real-world experiments as well as synthetic data to examine the qualitative and quantitative attributes of our proposed framework. Furthermore, we present a taxonomy of 3D SEM surface reconstruction approaches and address several challenging issues as part of our future work. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. MRI and Stereo Vision Surface Reconstruction and Fusion

    OpenAIRE

    El Chemaly, Trishia; Siepel, Françoise Jeanette; Rihana, Sandy; Groenhuis, Vincent; van der Heijden, Ferdinand; Stramigioli, Stefano

    2017-01-01

    Breast cancer, the most commonly diagnosed cancer in women worldwide, is mostly detected through a biopsy where tissue is extracted and chemically examined or pathologist assessed. Medical imaging plays a valuable role in targeting malignant tissue accurately and guiding the radiologist during needle insertion in a biopsy. This paper proposes a computer software that can process and combine 3D reconstructed surfaces from different imaging modalities, particularly Magnetic Resonance Imaging (M...

  4. Multiview specular stereo reconstruction of large mirror surfaces

    KAUST Repository

    Balzer, Jonathan

    2011-06-01

    In deflectometry, the shape of mirror objects is recovered from distorted images of a calibrated scene. While remarkably high accuracies are achievable, state-of-the-art methods suffer from two distinct weaknesses: First, for mainly constructive reasons, these can only capture a few square centimeters of surface area at once. Second, reconstructions are ambiguous i.e. infinitely many surfaces lead to the same visual impression. We resolve both of these problems by introducing the first multiview specular stereo approach, which jointly evaluates a series of overlapping deflectometric images. Two publicly available benchmarks accompany this paper, enabling us to numerically demonstrate viability and practicability of our approach. © 2011 IEEE.

  5. Variational reconstruction using subdivision surfaces with continuous sharpness control

    Institute of Scientific and Technical Information of China (English)

    Xiaoqun Wu; Jianmin Zheng; Yiyu Cai; Haisheng Li

    2017-01-01

    We present a variational method for subdivision surface reconstruction from a noisy dense mesh.A new set of subdivision rules with continuous sharpness control is introduced into Loop subdivision for better modeling subdivision surface features such as semi-sharp creases,creases,and corners.The key idea is to assign a sharpness value to each edge of the control mesh to continuously control the surface features.Based on the new subdivision rules,a variational model with L1 norm is formulated to find the control mesh and the corresponding sharpness values of the subdivision surface that best fits the input mesh.An iterative solver based on the augmented Lagrangian method and particle swarm optimization is used to solve the resulting non-linear,non-differentiable optimization problem.Our experimental results show that our method can handle meshes well with sharp/semi-sharp features and noise.

  6. A continuous surface reconstruction method on point cloud captured from a 3D surface photogrammetry system.

    Science.gov (United States)

    Liu, Wenyang; Cheung, Yam; Sabouri, Pouya; Arai, Tatsuya J; Sawant, Amit; Ruan, Dan

    2015-11-01

    To accurately and efficiently reconstruct a continuous surface from noisy point clouds captured by a surface photogrammetry system (VisionRT). The authors have developed a level-set based surface reconstruction method on point clouds captured by a surface photogrammetry system (VisionRT). The proposed method reconstructs an implicit and continuous representation of the underlying patient surface by optimizing a regularized fitting energy, offering extra robustness to noise and missing measurements. By contrast to explicit/discrete meshing-type schemes, their continuous representation is particularly advantageous for subsequent surface registration and motion tracking by eliminating the need for maintaining explicit point correspondences as in discrete models. The authors solve the proposed method with an efficient narrowband evolving scheme. The authors evaluated the proposed method on both phantom and human subject data with two sets of complementary experiments. In the first set of experiment, the authors generated a series of surfaces each with different black patches placed on one chest phantom. The resulting VisionRT measurements from the patched area had different degree of noise and missing levels, since VisionRT has difficulties in detecting dark surfaces. The authors applied the proposed method to point clouds acquired under these different configurations, and quantitatively evaluated reconstructed surfaces by comparing against a high-quality reference surface with respect to root mean squared error (RMSE). In the second set of experiment, the authors applied their method to 100 clinical point clouds acquired from one human subject. In the absence of ground-truth, the authors qualitatively validated reconstructed surfaces by comparing the local geometry, specifically mean curvature distributions, against that of the surface extracted from a high-quality CT obtained from the same patient. On phantom point clouds, their method achieved submillimeter

  7. A continuous surface reconstruction method on point cloud captured from a 3D surface photogrammetry system

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Wenyang [Department of Bioengineering, University of California, Los Angeles, California 90095 (United States); Cheung, Yam; Sabouri, Pouya; Arai, Tatsuya J.; Sawant, Amit [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas 75390 (United States); Ruan, Dan, E-mail: druan@mednet.ucla.edu [Department of Bioengineering, University of California, Los Angeles, California 90095 and Department of Radiation Oncology, University of California, Los Angeles, California 90095 (United States)

    2015-11-15

    Purpose: To accurately and efficiently reconstruct a continuous surface from noisy point clouds captured by a surface photogrammetry system (VisionRT). Methods: The authors have developed a level-set based surface reconstruction method on point clouds captured by a surface photogrammetry system (VisionRT). The proposed method reconstructs an implicit and continuous representation of the underlying patient surface by optimizing a regularized fitting energy, offering extra robustness to noise and missing measurements. By contrast to explicit/discrete meshing-type schemes, their continuous representation is particularly advantageous for subsequent surface registration and motion tracking by eliminating the need for maintaining explicit point correspondences as in discrete models. The authors solve the proposed method with an efficient narrowband evolving scheme. The authors evaluated the proposed method on both phantom and human subject data with two sets of complementary experiments. In the first set of experiment, the authors generated a series of surfaces each with different black patches placed on one chest phantom. The resulting VisionRT measurements from the patched area had different degree of noise and missing levels, since VisionRT has difficulties in detecting dark surfaces. The authors applied the proposed method to point clouds acquired under these different configurations, and quantitatively evaluated reconstructed surfaces by comparing against a high-quality reference surface with respect to root mean squared error (RMSE). In the second set of experiment, the authors applied their method to 100 clinical point clouds acquired from one human subject. In the absence of ground-truth, the authors qualitatively validated reconstructed surfaces by comparing the local geometry, specifically mean curvature distributions, against that of the surface extracted from a high-quality CT obtained from the same patient. Results: On phantom point clouds, their method

  8. Absolute surface reconstruction by slope metrology and photogrammetry

    Science.gov (United States)

    Dong, Yue

    Developing the manufacture of aspheric and freeform optical elements requires an advanced metrology method which is capable of inspecting these elements with arbitrary freeform surfaces. In this dissertation, a new surface measurement scheme is investigated for such a purpose, which is to measure the absolute surface shape of an object under test through its surface slope information obtained by photogrammetric measurement. A laser beam propagating toward the object reflects on its surface while the vectors of the incident and reflected beams are evaluated from the four spots they leave on the two parallel transparent windows in front of the object. The spots' spatial coordinates are determined by photogrammetry. With the knowledge of the incident and reflected beam vectors, the local slope information of the object surface is obtained through vector calculus and finally yields the absolute object surface profile by a reconstruction algorithm. An experimental setup is designed and the proposed measuring principle is experimentally demonstrated by measuring the absolute surface shape of a spherical mirror. The measurement uncertainty is analyzed, and efforts for improvement are made accordingly. In particular, structured windows are designed and fabricated to generate uniform scattering spots left by the transmitted laser beams. Calibration of the fringe reflection instrument, another typical surface slope measurement method, is also reported in the dissertation. Finally, a method for uncertainty analysis of a photogrammetry measurement system by optical simulation is investigated.

  9. Polynomials, Riemann surfaces, and reconstructing missing-energy events

    CERN Document Server

    Gripaios, Ben; Webber, Bryan

    2011-01-01

    We consider the problem of reconstructing energies, momenta, and masses in collider events with missing energy, along with the complications introduced by combinatorial ambiguities and measurement errors. Typically, one reconstructs more than one value and we show how the wrong values may be correlated with the right ones. The problem has a natural formulation in terms of the theory of Riemann surfaces. We discuss examples including top quark decays in the Standard Model (relevant for top quark mass measurements and tests of spin correlation), cascade decays in models of new physics containing dark matter candidates, decays of third-generation leptoquarks in composite models of electroweak symmetry breaking, and Higgs boson decay into two tau leptons.

  10. PolyFit: Polygonal Surface Reconstruction from Point Clouds

    KAUST Repository

    Nan, Liangliang; Wonka, Peter

    2017-01-01

    We propose a novel framework for reconstructing lightweight polygonal surfaces from point clouds. Unlike traditional methods that focus on either extracting good geometric primitives or obtaining proper arrangements of primitives, the emphasis of this work lies in intersecting the primitives (planes only) and seeking for an appropriate combination of them to obtain a manifold polygonal surface model without boundary.,We show that reconstruction from point clouds can be cast as a binary labeling problem. Our method is based on a hypothesizing and selection strategy. We first generate a reasonably large set of face candidates by intersecting the extracted planar primitives. Then an optimal subset of the candidate faces is selected through optimization. Our optimization is based on a binary linear programming formulation under hard constraints that enforce the final polygonal surface model to be manifold and watertight. Experiments on point clouds from various sources demonstrate that our method can generate lightweight polygonal surface models of arbitrary piecewise planar objects. Besides, our method is capable of recovering sharp features and is robust to noise, outliers, and missing data.

  11. PolyFit: Polygonal Surface Reconstruction from Point Clouds

    KAUST Repository

    Nan, Liangliang

    2017-12-25

    We propose a novel framework for reconstructing lightweight polygonal surfaces from point clouds. Unlike traditional methods that focus on either extracting good geometric primitives or obtaining proper arrangements of primitives, the emphasis of this work lies in intersecting the primitives (planes only) and seeking for an appropriate combination of them to obtain a manifold polygonal surface model without boundary.,We show that reconstruction from point clouds can be cast as a binary labeling problem. Our method is based on a hypothesizing and selection strategy. We first generate a reasonably large set of face candidates by intersecting the extracted planar primitives. Then an optimal subset of the candidate faces is selected through optimization. Our optimization is based on a binary linear programming formulation under hard constraints that enforce the final polygonal surface model to be manifold and watertight. Experiments on point clouds from various sources demonstrate that our method can generate lightweight polygonal surface models of arbitrary piecewise planar objects. Besides, our method is capable of recovering sharp features and is robust to noise, outliers, and missing data.

  12. Fusion of intraoperative force sensoring, surface reconstruction and biomechanical modeling

    Science.gov (United States)

    Röhl, S.; Bodenstedt, S.; Küderle, C.; Suwelack, S.; Kenngott, H.; Müller-Stich, B. P.; Dillmann, R.; Speidel, S.

    2012-02-01

    Minimally invasive surgery is medically complex and can heavily benefit from computer assistance. One way to help the surgeon is to integrate preoperative planning data into the surgical workflow. This information can be represented as a customized preoperative model of the surgical site. To use it intraoperatively, it has to be updated during the intervention due to the constantly changing environment. Hence, intraoperative sensor data has to be acquired and registered with the preoperative model. Haptic information which could complement the visual sensor data is still not established. In addition, biomechanical modeling of the surgical site can help in reflecting the changes which cannot be captured by intraoperative sensors. We present a setting where a force sensor is integrated into a laparoscopic instrument. In a test scenario using a silicone liver phantom, we register the measured forces with a reconstructed surface model from stereo endoscopic images and a finite element model. The endoscope, the instrument and the liver phantom are tracked with a Polaris optical tracking system. By fusing this information, we can transfer the deformation onto the finite element model. The purpose of this setting is to demonstrate the principles needed and the methods developed for intraoperative sensor data fusion. One emphasis lies on the calibration of the force sensor with the instrument and first experiments with soft tissue. We also present our solution and first results concerning the integration of the force sensor as well as accuracy to the fusion of force measurements, surface reconstruction and biomechanical modeling.

  13. Stereoscopic and photometric surface reconstruction in scanning electron microscopy

    International Nuclear Information System (INIS)

    Scherer, S.

    2000-01-01

    The scanning electron microscope (SEM) is one of the most important devices to examine microscopic structures as it offers images of a high contrast range with a large depth of focus. Nevertheless, three-dimensional measurements, as desired in fracture mechanics, have previously not been accomplished. This work presents a system for automatic, robust and dense surface reconstruction in scanning electron microscopy combining new approaches in shape from stereo and shape from photometric stereo. The basic theoretical assumption for a known adaptive window algorithm is shown not to hold in scanning electron microscopy. A constraint derived from this observation yields a new, simplified, hence faster calculation of the adaptive window. The correlation measure itself is obtained by a new ordinal measure coefficient. Shape from photometric stereo in the SEM is formulated by relating the image formation process with conventional photography. An iterative photometric ratio reconstruction is invented based on photometric ratios of backscatter electron images. The performance of the proposed system is evaluated using ground truth data obtained by three alternative shape recovery devices. Most experiments showed relative height accuracy within the tolerances of the alternative devices. (author)

  14. Polaron-mediated surface reconstruction in the reduced Rutile TiO2 (110) surface

    Science.gov (United States)

    Reticcioli, Michele; Setvin, Martin; Hao, Xianfeng; Diebold, Ulrike; Franchini, Cesare

    The role of polarons is of key importance for the understanding of the fundamental properties and functionalities of TiO2. We use density functional theory with an on-site Coulomb interaction and molecular dynamics to study the formation and dynamics of small polarons in the reduced rutile (110) surface. We show that excess electrons donated by oxygen-vacancies (VO) form mobile small polarons that hop easily in subsurface and surface Ti-sites. The polaron formation becomes more favorable by increasing the VO concentration level (up to 20%) due to the progressively lower energy cost needed to distort the lattice. However, at higher VO concentration the shortening of the averaged polaron-polaron distance leads to an increased Coulomb repulsion among the trapped charges at the Ti-sites, which weakens this trend. This instability is overtaken by means of a structural 1 × 2 surface reconstruction, characterized by a distinctively more favorable polaron distribution. The calculations are validated by a direct comparison with experimental AFM and STM data. Our study identifies a fundamentally novel mechanism to drive surface reconstructions and resolves a long standing issue on the origin of the reconstruction in rutile (110) surface.

  15. Fermi-surface reconstruction by stripe order in cuprate superconductors

    Science.gov (United States)

    Laliberté, Francis

    2012-02-01

    The origin of pairing in a superconductor resides in the underlying normal state. In the cuprate high-temperature superconductor YBCO, application of a magnetic field to suppress superconductivity reveals a ground state that appears to break the translational symmetry of the lattice, pointing to some density-wave order [1,2,3]. In another cuprate, Eu-LSCO, the onset of stripe order - a modulation of spin and charge densities - at low temperature is well established [4]. By a comparative study of thermoelectric transport in the cuprates YBCO and Eu-LSCO, we show that the two materials exhibit a very similar process of Fermi-surface reconstruction as a function of temperature and doping [5,6]. This strongly suggests that Fermi-surface reconstruction is caused by stripe order in both cases, compelling evidence that stripe order is a generic tendency of hole-doped cuprates.[4pt] Work done in collaboration with J. Chang, N. Doiron-Leyraud, E. Hassinger, R. Daou, D. LeBoeuf, M. Rondeau, B. J. Ramshaw, R. Liang, D. A. Bonn, W. N. Hardy, S. Pyon, T. Takayama, H. Takagi, I. Sheikin, L. Malone, C. Proust, K. Behnia and L. Taillefer.[4pt] [1] N. Doiron-Leyraud et al., Nature 447, 565 (2007).[0pt] [2] D. LeBoeuf et al., Nature 450, 533 (2007).[0pt] [3] D. LeBoeuf et al., Phys. Rev. B 83, 054506 (2011).[0pt] [4] J. Fink et al., Phys. Rev. B 83, 092503 (2011).[0pt] [5] J. Chang et al., Phys. Rev. Lett. 104, 057005 (2010).[0pt] [6] F. Lalibert'e et al., Nat. Commun. 2, 432 (2011).

  16. 3D surface reconstruction using optical flow for medical imaging

    International Nuclear Information System (INIS)

    Weng, Nan; Yang, Yee-Hong; Pierson, R.

    1996-01-01

    The recovery of a 3D model from a sequence of 2D images is very useful in medical image analysis. Image sequences obtained from the relative motion between the object and the camera or the scanner contain more 3D information than a single image. Methods to visualize the computed tomograms can be divided into two approaches: the surface rendering approach and the volume rendering approach. A new surface rendering method using optical flow is proposed. Optical flow is the apparent motion in the image plane produced by the projection of the real 3D motion onto 2D image. In this paper, the object remains stationary while the scanner undergoes translational motion. The 3D motion of an object can be recovered from the optical flow field using additional constraints. By extracting the surface information from 3D motion, it is possible to get an accurate 3D model of the object. Both synthetic and real image sequences have been used to illustrate the feasibility of the proposed method. The experimental results suggest that the proposed method is suitable for the reconstruction of 3D models from ultrasound medical images as well as other computed tomograms

  17. Preserving half-metallic surface states in Cr O2 : Insights into surface reconstruction rules

    Science.gov (United States)

    Deng, Bei; Shi, X. Q.; Chen, L.; Tong, S. Y.

    2018-04-01

    The issue of whether the half-metallic (HM) nature of Cr O2 could be retained at its surface has been a standing problem under debate for a few decades, but until now is still controversial. Here, based on the density functional theory calculations we show, in startling contrast to the previous theoretical understandings, that the surfaces of Cr O2 favorably exhibit a half-metallic-semiconducting (SmC) transition driven by means of a surface electronic reconstruction largely attributed to the participation of the unexpected local charge carriers (LCCs), which convert the HM double exchange surface state into a SmC superexchange state and in turn, stabilize the surface as well. On the basis of the LCCs model, a new insight into the surface reconstruction rules is attained. Our novel finding not only provided an evident interpretation for the widely observed SmC character of Cr O2 surface, but also offered a novel means to improve the HM surface states for a variety of applications in spintronics and superconductors, and promote the experimental realization of the quantum anomalous Hall effect in half-metal based systems.

  18. General surface reconstruction for cone-beam multislice spiral computed tomography

    International Nuclear Information System (INIS)

    Chen Laigao; Liang Yun; Heuscher, Dominic J.

    2003-01-01

    A new family of cone-beam reconstruction algorithm, the General Surface Reconstruction (GSR), is proposed and formulated in this paper for multislice spiral computed tomography (CT) reconstructions. It provides a general framework to allow the reconstruction of planar or nonplanar surfaces on a set of rebinned short-scan parallel beam projection data. An iterative surface formation method is proposed as an example to show the possibility to form nonplanar reconstruction surfaces to minimize the adverse effect between the collected cone-beam projection data and the reconstruction surfaces. The improvement in accuracy of the nonplanar surfaces over planar surfaces in the two-dimensional approximate cone-beam reconstructions is mathematically proved and demonstrated using numerical simulations. The proposed GSR algorithm is evaluated by the computer simulation of cone-beam spiral scanning geometry and various mathematical phantoms. The results demonstrate that the GSR algorithm generates much better image quality compared to conventional multislice reconstruction algorithms. For a table speed up to 100 mm per rotation, GSR demonstrates good image quality for both the low-contrast ball phantom and thorax phantom. All other performance parameters are comparable to the single-slice 180 deg. LI (linear interpolation) algorithm, which is considered the 'gold standard'. GSR also achieves high computing efficiency and good temporal resolution, making it an attractive alternative for the reconstruction of next generation multislice spiral CT data

  19. Reconstructions of the sulfur-passivated InSb (100) surface

    Energy Technology Data Exchange (ETDEWEB)

    Ciochoń, Piotr, E-mail: piotr.ciochon@doctoral.uj.edu.pl; Olszowska, Natalia; Wróbel, Sonia; Kołodziej, Jacek

    2017-04-01

    Highlights: • Two new surface reconstructions of a S-passivated InSb (001) surface are reported. • The reconstructions are obtained through partial loss of surface sulfur. • They are characterized by the thickness of ∼4 Å and good crystallographic ordering. • The reconstructions provide adequate electronic passivation of the surface. - Abstract: We have studied the properties of the InSb (100) surface passivated with sulfur dimers emitted by the solid-state electrochemical cell in ultra-high vacuum. Annealing the passivated surface in the temperature equal to T = 326 °C led to the formation of the c(4 × 8) surface reconstruction, while increasing the temperature to T = 348 °C resulted in the transition to c(4 × 12) reconstruction. To the best of our knowledge these reconstructions have not been reported to date and are characterized by the exceptionally good crystallographic order. XPS studies revealed that there are at least 4 different chemical species of sulfur present on the surface and the estimated thickness of the sulfur layers is equal to around 4 Å. The surface reconstructions are characterized by the lowered intensity of the surface electronic states and resonances near the Fermi level, compared to the clean InSb surface, making them potentially very useful for the fabrication of InSb-based electronic and optoelectronic devices.

  20. Surface Topology Reconstruction From The White Light Interferogram By Means Of Prony Analysis

    Directory of Open Access Journals (Sweden)

    Khoma Anna

    2015-12-01

    Full Text Available The paper presents a new method of surface topology reconstruction from a white light interferogram. The method is based on interferogram modelling by complex exponents (Prony method. The compatibility of white light interferogram and Prony models has already been proven. Effectiveness of the method was tested by modelling and examining reconstruction of tilted and spherical surfaces, and by estimating the reconstruction accuracy.

  1. Surface-reconstructed graphite nanofibers as a support for cathode catalysts of fuel cells.

    Science.gov (United States)

    Gan, Lin; Du, Hongda; Li, Baohua; Kang, Feiyu

    2011-04-07

    Graphite nanofibers (GNFs), on which surface graphite edges were reconstructed into nano-loops, were explored as a cathode catalyst support for fuel cells. The high degree of graphitization, as well as the surface-reconstructed nano-loops that possess topological defects for uniform metal deposition, resulted in an improved performance of the GNF-supported Pt catalyst.

  2. Reconstruction of surface impedance of an object located over a planar PEC surface

    International Nuclear Information System (INIS)

    Uenal, Guel Seda; Cayoeren, Mehmet; Tetik, Evrim

    2008-01-01

    A method for the determination of inhomogeneous surface impedance of an arbitrary shaped cylindrical object located over a perfectly conducting (PEC) plane is presented. The problem is reduced to the solution of an ill-posed integral equation by the use of single layer representation which is handled by Truncated Singular Value Decomposition (TSVD). The total field and its normal derivative on the boundary of the object which are required for the evaluation of the surface impedance are obtained through Nystroem method. The method can also be used in shape reconstruction by using the relation between the shape of a PEC object and its equivalent one in terms of the surface impedance. The numerical implementations yield quite satisfactory results.

  3. A Survey on Methods for Reconstructing Surfaces from Unorganized Point Sets

    Directory of Open Access Journals (Sweden)

    Vilius Matiukas

    2011-08-01

    Full Text Available This paper addresses the issue of reconstructing and visualizing surfaces from unorganized point sets. These can be acquired using different techniques, such as 3D-laser scanning, computerized tomography, magnetic resonance imaging and multi-camera imaging. The problem of reconstructing surfaces from their unorganized point sets is common for many diverse areas, including computer graphics, computer vision, computational geometry or reverse engineering. The paper presents three alternative methods that all use variations in complementary cones to triangulate and reconstruct the tested 3D surfaces. The article evaluates and contrasts three alternatives.Article in English

  4. Diagnostic value of 3 D CT surface reconstruction in spinal fractures

    Energy Technology Data Exchange (ETDEWEB)

    Koesling, S. [Department of Radiology, Univ. of Leipzig (Germany); Dietrich, K. [Department of Radiology, Univ. of Leipzig (Germany); Steinecke, R. [Department of Radiology, Univ. of Leipzig (Germany); Kloeppel, R. [Department of Radiology, Univ. of Leipzig (Germany); Schulz, H.G. [Department of Radiology, Univ. of Leipzig (Germany)

    1997-02-01

    Our purpose was to evaluate the diagnostic value of three-dimensional (3 D) CT surface reconstruction in spinal fractures in comparison with axial and reformatted images. A total of 50 patients with different CT-proven spinal fractures were analysed retrospectively. Based on axial scans and reformatted images, the spinal fractures were classified according to several classifications as Magerl for the thoraco-lumbar and lower cervical spine by one radiologist. Another radiologist performed 3 D CT surface reconstructions with the aim of characterizing the different types of spinal fractures. A third radiologist classified the 3 D CT surface reconstruction according to the Magerl classification. The results of the blinded reading process were compared. It was checked to see in which type and subgroup 3 D surface reconstructions were helpful. Readers one and two obtained the same results in the classification. The 3 D surface reconstruction did not yield any additional diagnostic information concerning type A and B injuries. Indeed, the full extent of the fracture could be easier recognized with axial and reformatted images in all cases. In 10 cases of C injuries, the dislocation of parts of vertebrae could be better recognized with the help of 3 D reconstructions. A 3 D CT surface reconstruction is only useful in rotational and shear vertebral injuries (Magerl type C injury). (orig.). With 4 figs., 1 tab.

  5. Preservation of the Pt(100) surface reconstruction after growth of a continuous layer of graphene

    DEFF Research Database (Denmark)

    Nilsson, Louis; Andersen, Mie; Bjerre, Jacob

    2012-01-01

    Scanning tunneling microscopy shows that a layer of graphene can be grown on the hex-reconstructed Pt(100) surface and that the reconstruction is preserved after growth. A continuous sheet of graphene can be grown across domain boundaries and step edges without loss of periodicity or change in di...

  6. The Effects of Surface Reconstruction and Electron-Positron Correlation on the Annihilation Characteristics of Positrons Trapped at Semiconductor Surfaces

    International Nuclear Information System (INIS)

    Fazleev, N. G.; Jung, E.; Weiss, A. H.

    2009-01-01

    Experimental positron annihilation induced Auger electron spectroscopy (PAES) data from Ge(100) and Ge(111) surfaces display several strong Auger peaks corresponding to M 4,5 N 1 N 2,3 , M 2,3 M 4,5 M 4,5 , M 2,3 M 4,5 V, and M 1 M 4,5 M 4,5 Auger transitions. The integrated peak intensities of Auger transitions have been used to obtain experimental annihilation probabilities for the Ge 3d and 3p core electrons. The experimental data were analyzed by performing theoretical studies of the effects of surface reconstructions and electron-positron correlations on image potential induced surface states and annihilation characteristics of positrons trapped at the reconstructed Ge(100) and Ge(111) surfaces. Calculations of positron surface states and annihilation characteristics have been performed for Ge(100) surface with (2x1), (2x2), and (4x2) reconstructions, and for Ge(111) surface with c(2x8) reconstruction. Estimates of the positron binding energy and annihilation characteristics reveal their sensitivity to the specific atomic structure of the topmost layers of the semiconductor and to the approximations used to describe electron-positron correlations. The results of these theoretical studies are compared with the ones obtained for the reconstructed Si(100)-(2x1) and Si(111)-(7x7) surfaces.

  7. Surface reconstruction and deformation monitoring of stratospheric airship based on laser scanning technology

    Science.gov (United States)

    Guo, Kai; Xie, Yongjie; Ye, Hu; Zhang, Song; Li, Yunfei

    2018-04-01

    Due to the uncertainty of stratospheric airship's shape and the security problem caused by the uncertainty, surface reconstruction and surface deformation monitoring of airship was conducted based on laser scanning technology and a √3-subdivision scheme based on Shepard interpolation was developed. Then, comparison was conducted between our subdivision scheme and the original √3-subdivision scheme. The result shows our subdivision scheme could reduce the shrinkage of surface and the number of narrow triangles. In addition, our subdivision scheme could keep the sharp features. So, surface reconstruction and surface deformation monitoring of airship could be conducted precisely by our subdivision scheme.

  8. Extended Reconstructed Sea Surface Temperature (ERSST) Monthly Analysis, Version 3b

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Version 3b (v3b) of the Extended Reconstructed Sea Surface Temperature (ERSST) dataset is a monthly SST analysis on a 2-degree global grid based on the International...

  9. Analysis of fracture surface of CFRP material by three-dimensional reconstruction methods

    International Nuclear Information System (INIS)

    Lobo, Raquel M.; Andrade, Arnaldo H.P.

    2009-01-01

    Fracture surfaces of CFRP (carbon Fiber Reinforced Polymer) materials, used in the nuclear fuel cycle, presents an elevated roughness, mainly due to the fracture mode known as pulling out, that displays pieces of carbon fibers after debonding between fiber and matrix. The fractographic analysis, by bi-dimensional images is deficient for not considering the so important vertical resolution as much as the horizontal resolution. In this case, the knowledge of this heights distribution that occurs during the breaking, can lead to the calculation of the involved energies in the process that would allows a better agreement on the fracture mechanisms of the composite material. An important solution for the material characterization, whose surface presents a high roughness due to the variation in height, is to reconstruct three-dimensionally these fracture surfaces. In this work, the 3D reconstruction was done by two different methods: the variable focus reconstruction, through a stack of images obtained by optical microscopy (OM) and the parallax reconstruction, carried through with images acquired by scanning electron microscopy (SEM). The results of both methods present an elevation map of the reconstructed image that determine the height of the surface pixel by pixel,. The results obtained by the methods of reconstruction for the CFRP surfaces, have been compared with others materials such as aluminum and copper that present a ductile type fracture surface, with lower roughness. (author)

  10. Electronic structure studies of a clock-reconstructed Al/Pd(1 0 0) surface alloy

    Science.gov (United States)

    Kirsch, Janet E.; Tainter, Craig J.

    We have employed solid-state Fenske-Hall band structure calculations to examine the electronic structure of Al/Pd(1 0 0), a surface alloy that undergoes a reconstruction, or rearrangement, of the atoms in the top few surface layers. Surface alloys are materials that consist primarily of a single elemental metal, but which have a bimetallic surface composition that is only a few atomic layers in thickness. The results of this study indicate that reconstruction into a clock configuration simultaneously optimizes the intralayer bonding within the surface plane and the bonding between the first and second atomic layers. These results also allow us to examine the fundamental relationship between the electronic and physical structures of this reconstructed surface alloy.

  11. Validation of a laboratory method for evaluating dynamic properties of reconstructed equine racetrack surfaces.

    Directory of Open Access Journals (Sweden)

    Jacob J Setterbo

    Full Text Available Racetrack surface is a risk factor for racehorse injuries and fatalities. Current research indicates that race surface mechanical properties may be influenced by material composition, moisture content, temperature, and maintenance. Race surface mechanical testing in a controlled laboratory setting would allow for objective evaluation of dynamic properties of surface and factors that affect surface behavior.To develop a method for reconstruction of race surfaces in the laboratory and validate the method by comparison with racetrack measurements of dynamic surface properties.Track-testing device (TTD impact tests were conducted to simulate equine hoof impact on dirt and synthetic race surfaces; tests were performed both in situ (racetrack and using laboratory reconstructions of harvested surface materials. Clegg Hammer in situ measurements were used to guide surface reconstruction in the laboratory. Dynamic surface properties were compared between in situ and laboratory settings. Relationships between racetrack TTD and Clegg Hammer measurements were analyzed using stepwise multiple linear regression.Most dynamic surface property setting differences (racetrack-laboratory were small relative to surface material type differences (dirt-synthetic. Clegg Hammer measurements were more strongly correlated with TTD measurements on the synthetic surface than the dirt surface. On the dirt surface, Clegg Hammer decelerations were negatively correlated with TTD forces.Laboratory reconstruction of racetrack surfaces guided by Clegg Hammer measurements yielded TTD impact measurements similar to in situ values. The negative correlation between TTD and Clegg Hammer measurements confirms the importance of instrument mass when drawing conclusions from testing results. Lighter impact devices may be less appropriate for assessing dynamic surface properties compared to testing equipment designed to simulate hoof impact (TTD.Dynamic impact properties of race surfaces

  12. Exploration, Sampling, And Reconstruction of Free Energy Surfaces with Gaussian Process Regression.

    Science.gov (United States)

    Mones, Letif; Bernstein, Noam; Csányi, Gábor

    2016-10-11

    Practical free energy reconstruction algorithms involve three separate tasks: biasing, measuring some observable, and finally reconstructing the free energy surface from those measurements. In more than one dimension, adaptive schemes make it possible to explore only relatively low lying regions of the landscape by progressively building up the bias toward the negative of the free energy surface so that free energy barriers are eliminated. Most schemes use the final bias as their best estimate of the free energy surface. We show that large gains in computational efficiency, as measured by the reduction of time to solution, can be obtained by separating the bias used for dynamics from the final free energy reconstruction itself. We find that biasing with metadynamics, measuring a free energy gradient estimator, and reconstructing using Gaussian process regression can give an order of magnitude reduction in computational cost.

  13. 3D Surface Reconstruction for Lower Limb Prosthetic Model using Radon Transform

    Science.gov (United States)

    Sobani, S. S. Mohd; Mahmood, N. H.; Zakaria, N. A.; Razak, M. A. Abdul

    2018-03-01

    This paper describes the idea to realize three-dimensional surfaces of objects with cylinder-based shapes where the techniques adopted and the strategy developed for a non-rigid three-dimensional surface reconstruction of an object from uncalibrated two-dimensional image sequences using multiple-view digital camera and turntable setup. The surface of an object is reconstructed based on the concept of tomography with the aid of performing several digital image processing algorithms on the two-dimensional images captured by a digital camera in thirty-six different projections and the three-dimensional structure of the surface is analysed. Four different objects are used as experimental models in the reconstructions and each object is placed on a manually rotated turntable. The results shown that the proposed method has successfully reconstruct the three-dimensional surface of the objects and practicable. The shape and size of the reconstructed three-dimensional objects are recognizable and distinguishable. The reconstructions of objects involved in the test are strengthened with the analysis where the maximum percent error obtained from the computation is approximately 1.4 % for the height whilst 4.0%, 4.79% and 4.7% for the diameters at three specific heights of the objects.

  14. A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system.

    Science.gov (United States)

    Liu, Wenyang; Cheung, Yam; Sawant, Amit; Ruan, Dan

    2016-05-01

    To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced occlusions. The authors have

  15. A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system

    International Nuclear Information System (INIS)

    Liu, Wenyang; Cheung, Yam; Sawant, Amit; Ruan, Dan

    2016-01-01

    Purpose: To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. Methods: The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. Results: On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced

  16. A robust real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Wenyang [Department of Bioengineering, University of California, Los Angeles, Los Angeles, California 90095 (United States); Cheung, Yam [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas 75390 (United States); Sawant, Amit [Department of Radiation Oncology, University of Texas Southwestern, Dallas, Texas, 75390 and Department of Radiation Oncology, University of Maryland, College Park, Maryland 20742 (United States); Ruan, Dan, E-mail: druan@mednet.ucla.edu [Department of Bioengineering, University of California, Los Angeles, Los Angeles, California 90095 and Department of Radiation Oncology, University of California, Los Angeles, Los Angeles, California 90095 (United States)

    2016-05-15

    Purpose: To develop a robust and real-time surface reconstruction method on point clouds captured from a 3D surface photogrammetry system. Methods: The authors have developed a robust and fast surface reconstruction method on point clouds acquired by the photogrammetry system, without explicitly solving the partial differential equation required by a typical variational approach. Taking advantage of the overcomplete nature of the acquired point clouds, their method solves and propagates a sparse linear relationship from the point cloud manifold to the surface manifold, assuming both manifolds share similar local geometry. With relatively consistent point cloud acquisitions, the authors propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, assuming that the point correspondences built by the iterative closest point (ICP) is reasonably accurate and have residual errors following a Gaussian distribution. To accommodate changing noise levels and/or presence of inconsistent occlusions during the acquisition, the authors further propose a modified sparse regression (MSR) model to model the potentially large and sparse error built by ICP with a Laplacian prior. The authors evaluated the proposed method on both clinical point clouds acquired under consistent acquisition conditions and on point clouds with inconsistent occlusions. The authors quantitatively evaluated the reconstruction performance with respect to root-mean-squared-error, by comparing its reconstruction results against that from the variational method. Results: On clinical point clouds, both the SR and MSR models have achieved sub-millimeter reconstruction accuracy and reduced the reconstruction time by two orders of magnitude to a subsecond reconstruction time. On point clouds with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent and robust performance despite the introduced

  17. Technical report on the surface reconstruction of stacked contours by using the commercial software

    Science.gov (United States)

    Shin, Dong Sun; Chung, Min Suk; Hwang, Sung Bae; Park, Jin Seo

    2007-03-01

    After drawing and stacking contours of a structure, which is identified in the serially sectioned images, three-dimensional (3D) image can be made by surface reconstruction. Usually, software is composed for the surface reconstruction. In order to compose the software, medical doctors have to acquire the help of computer engineers. So in this research, surface reconstruction of stacked contours was tried by using commercial software. The purpose of this research is to enable medical doctors to perform surface reconstruction to make 3D images by themselves. The materials of this research were 996 anatomic images (1 mm intervals) of left lower limb, which were made by serial sectioning of a cadaver. On the Adobe Photoshop, contours of 114 anatomic structures were drawn, which were exported to Adobe Illustrator files. On the Maya, contours of each anatomic structure were stacked. On the Rhino, superoinferior lines were drawn along all stacked contours to fill quadrangular surfaces between contours. On the Maya, the contours were deleted. 3D images of 114 anatomic structures were assembled with their original locations preserved. With the surface reconstruction technique, developed in this research, medical doctors themselves could make 3D images of the serially sectioned images such as CTs and MRIs.

  18. Effects of surface relaxation and reconstruction on the vibration characteristics of nanobeams

    International Nuclear Information System (INIS)

    Zhang, Wen-Ming; Hu, Kai-Ming; Peng, Zhi-Ke; Meng, Guang; Yang, Bin

    2016-01-01

    Surface effects on the free vibration characteristics of nanobeams are investigated by a modified continuum model. In this paper, the relationship between the parameters of the modified continuum model of surface effects including surface elasticity, surface density, and residual surface stresses, and the parameters of the atomistic lattice model such as surface relaxation and reconstruction in nanobeams is characterized by an atomistic lattice model. The surface effects are incorporated into nanobeams to develop a modified continuum model depicting the free vibrational behavior of nanobeams. The model is validated with the experimental data of an effective size-dependent Young’s modulus and the previous theoretical results. The results demonstrate that both surface elasticity and surface density vary exponentially with surface layer thickness. Therefore, surface elasticity and density can be affected by surface relaxation and residual surface stresses can be induced by surface reconstruction. The natural frequencies of doubly clamped nanobeams can be affected by the dimensions of the nanobeams, surface layer thickness, and residual surface stress. This work may be helpful for understanding surface effects and their influence on the vibrational behavior of nanobeams. (paper)

  19. A photogrammetry-based system for 3D surface reconstruction of prosthetics and orthotics.

    Science.gov (United States)

    Li, Guang-kun; Gao, Fan; Wang, Zhi-gang

    2011-01-01

    The objective of this study is to develop an innovative close range digital photogrammetry (CRDP) system using the commercial digital SLR cameras to measure and reconstruct the 3D surface of prosthetics and orthotics. This paper describes the instrumentation, techniques and preliminary results of the proposed system. The technique works by taking pictures of the object from multiple view angles. The series of pictures were post-processed via feature point extraction, point match and 3D surface reconstruction. In comparison with the traditional method such as laser scanning, the major advantages of our instrument include the lower cost, compact and easy-to-use hardware, satisfactory measurement accuracy, and significantly less measurement time. Besides its potential applications in prosthetics and orthotics surface measurement, the simple setup and its ease of use will make it suitable for various 3D surface reconstructions.

  20. Direct observation of surface reconstruction and termination on a complex metal oxide catalyst by electron microscopy

    KAUST Repository

    Zhu, Yihan

    2012-03-19

    On the surface: The surface reconstruction of an MoVTeO complex metal oxide catalyst was observed directly by various electron microscopic techniques and the results explain the puzzling catalytic behavior. Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  1. Ultra Fast Optical Sectioning: Signal preserving filtering and surface reconstruction

    DEFF Research Database (Denmark)

    Jensen, Rasmus Ramsbøl; Poel, Mike van der; Larsen, Rasmus

    2011-01-01

    a signal preserving ltering of the data set is done. The remaining data are used for a smooth surface re- construction creating very plausible surfaces. The data used in our work comes from a newly developed hand held 3D scanner. The scanner is an Ultra Fast Optical Sectioning scanner, which is able...

  2. SU-E-J-128: 3D Surface Reconstruction of a Patient Using Epipolar Geometry

    Energy Technology Data Exchange (ETDEWEB)

    Kotoku, J; Nakabayashi, S; Kumagai, S; Ishibashi, T; Kobayashi, T [Teikyo University, Itabashi-ku, Tokyo (Japan); Haga, A; Saotome, N [University of Tokyo Hospital, Bunkyo-ku, Tokyo (Japan); Arai, N [Teikyo University Hospital, Itabashi-ku, Tokyo (Japan)

    2014-06-01

    Purpose: To obtain a 3D surface data of a patient in a non-invasive way can substantially reduce the effort for the registration of patient in radiation therapy. To achieve this goal, we introduced the multiple view stereo technique, which is known to be used in a 'photo tourism' on the internet. Methods: 70 Images were taken with a digital single-lens reflex camera from different angles and positions. The camera positions and angles were inferred later in the reconstruction step. A sparse 3D reconstruction model was locating by SIFT features, which is robust for rotation and shift variance, in each image. We then found a set of correspondences between pairs of images by computing the fundamental matrix using the eight-point algorithm with RANSAC. After the pair matching, we optimized the parameter including camera positions to minimize the reprojection error by use of bundle adjustment technique (non-linear optimization). As a final step, we performed dense reconstruction and associate a color with each point using the library of PMVS. Results: Surface data were reconstructed well by visual inspection. The human skin is reconstructed well, althogh the reconstruction was time-consuming for direct use in daily clinical practice. Conclusion: 3D reconstruction using multi view stereo geometry is a promising tool for reducing the effort of patient setup. This work was supported by JSPS KAKENHI(25861128)

  3. SU-E-J-128: 3D Surface Reconstruction of a Patient Using Epipolar Geometry

    International Nuclear Information System (INIS)

    Kotoku, J; Nakabayashi, S; Kumagai, S; Ishibashi, T; Kobayashi, T; Haga, A; Saotome, N; Arai, N

    2014-01-01

    Purpose: To obtain a 3D surface data of a patient in a non-invasive way can substantially reduce the effort for the registration of patient in radiation therapy. To achieve this goal, we introduced the multiple view stereo technique, which is known to be used in a 'photo tourism' on the internet. Methods: 70 Images were taken with a digital single-lens reflex camera from different angles and positions. The camera positions and angles were inferred later in the reconstruction step. A sparse 3D reconstruction model was locating by SIFT features, which is robust for rotation and shift variance, in each image. We then found a set of correspondences between pairs of images by computing the fundamental matrix using the eight-point algorithm with RANSAC. After the pair matching, we optimized the parameter including camera positions to minimize the reprojection error by use of bundle adjustment technique (non-linear optimization). As a final step, we performed dense reconstruction and associate a color with each point using the library of PMVS. Results: Surface data were reconstructed well by visual inspection. The human skin is reconstructed well, althogh the reconstruction was time-consuming for direct use in daily clinical practice. Conclusion: 3D reconstruction using multi view stereo geometry is a promising tool for reducing the effort of patient setup. This work was supported by JSPS KAKENHI(25861128)

  4. Reconstruction of Laser-Induced Surface Topography from Electron Backscatter Diffraction Patterns.

    Science.gov (United States)

    Callahan, Patrick G; Echlin, McLean P; Pollock, Tresa M; De Graef, Marc

    2017-08-01

    We demonstrate that the surface topography of a sample can be reconstructed from electron backscatter diffraction (EBSD) patterns collected with a commercial EBSD system. This technique combines the location of the maximum background intensity with a correction from Monte Carlo simulations to determine the local surface normals at each point in an EBSD scan. A surface height map is then reconstructed from the local surface normals. In this study, a Ni sample was machined with a femtosecond laser, which causes the formation of a laser-induced periodic surface structure (LIPSS). The topography of the LIPSS was analyzed using atomic force microscopy (AFM) and reconstructions from EBSD patterns collected at 5 and 20 kV. The LIPSS consisted of a combination of low frequency waviness due to curtaining and high frequency ridges. The morphology of the reconstructed low frequency waviness and high frequency ridges matched the AFM data. The reconstruction technique does not require any modification to existing EBSD systems and so can be particularly useful for measuring topography and its evolution during in situ experiments.

  5. Whole surface image reconstruction for machine vision inspection of fruit

    Science.gov (United States)

    Reese, D. Y.; Lefcourt, A. M.; Kim, M. S.; Lo, Y. M.

    2007-09-01

    Automated imaging systems offer the potential to inspect the quality and safety of fruits and vegetables consumed by the public. Current automated inspection systems allow fruit such as apples to be sorted for quality issues including color and size by looking at a portion of the surface of each fruit. However, to inspect for defects and contamination, the whole surface of each fruit must be imaged. The goal of this project was to develop an effective and economical method for whole surface imaging of apples using mirrors and a single camera. Challenges include mapping the concave stem and calyx regions. To allow the entire surface of an apple to be imaged, apples were suspended or rolled above the mirrors using two parallel music wires. A camera above the apples captured 90 images per sec (640 by 480 pixels). Single or multiple flat or concave mirrors were mounted around the apple in various configurations to maximize surface imaging. Data suggest that the use of two flat mirrors provides inadequate coverage of a fruit but using two parabolic concave mirrors allows the entire surface to be mapped. Parabolic concave mirrors magnify images, which results in greater pixel resolution and reduced distortion. This result suggests that a single camera with two parabolic concave mirrors can be a cost-effective method for whole surface imaging.

  6. Using Spherical-Harmonics Expansions for Optics Surface Reconstruction from Gradients.

    Science.gov (United States)

    Solano-Altamirano, Juan Manuel; Vázquez-Otero, Alejandro; Khikhlukha, Danila; Dormido, Raquel; Duro, Natividad

    2017-11-30

    In this paper, we propose a new algorithm to reconstruct optics surfaces (aka wavefronts) from gradients, defined on a circular domain, by means of the Spherical Harmonics. The experimental results indicate that this algorithm renders the same accuracy, compared to the reconstruction based on classical Zernike polynomials, using a smaller number of polynomial terms, which potentially speeds up the wavefront reconstruction. Additionally, we provide an open-source C++ library, released under the terms of the GNU General Public License version 2 (GPLv2), wherein several polynomial sets are coded. Therefore, this library constitutes a robust software alternative for wavefront reconstruction in a high energy laser field, optical surface reconstruction, and, more generally, in surface reconstruction from gradients. The library is a candidate for being integrated in control systems for optical devices, or similarly to be used in ad hoc simulations. Moreover, it has been developed with flexibility in mind, and, as such, the implementation includes the following features: (i) a mock-up generator of various incident wavefronts, intended to simulate the wavefronts commonly encountered in the field of high-energy lasers production; (ii) runtime selection of the library in charge of performing the algebraic computations; (iii) a profiling mechanism to measure and compare the performance of different steps of the algorithms and/or third-party linear algebra libraries. Finally, the library can be easily extended to include additional dependencies, such as porting the algebraic operations to specific architectures, in order to exploit hardware acceleration features.

  7. [Application of Fourier transform profilometry in 3D-surface reconstruction].

    Science.gov (United States)

    Shi, Bi'er; Lu, Kuan; Wang, Yingting; Li, Zhen'an; Bai, Jing

    2011-08-01

    With the improvement of system frame and reconstruction methods in fluorescent molecules tomography (FMT), the FMT technology has been widely used as an important experimental tool in biomedical research. It is necessary to get the 3D-surface profile of the experimental object as the boundary constraints of FMT reconstruction algorithms. We proposed a new 3D-surface reconstruction method based on Fourier transform profilometry (FTP) method under the blue-purple light condition. The slice images were reconstructed using proper image processing methods, frequency spectrum analysis and filtering. The results of experiment showed that the method properly reconstructed the 3D-surface of objects and has the mm-level accuracy. Compared to other methods, this one is simple and fast. Besides its well-reconstructed, the proposed method could help monitor the behavior of the object during the experiment to ensure the correspondence of the imaging process. Furthermore, the method chooses blue-purple light section as its light source to avoid the interference towards fluorescence imaging.

  8. Using Spherical-Harmonics Expansions for Optics Surface Reconstruction from Gradients

    Directory of Open Access Journals (Sweden)

    Juan Manuel Solano-Altamirano

    2017-11-01

    Full Text Available In this paper, we propose a new algorithm to reconstruct optics surfaces (aka wavefronts from gradients, defined on a circular domain, by means of the Spherical Harmonics. The experimental results indicate that this algorithm renders the same accuracy, compared to the reconstruction based on classical Zernike polynomials, using a smaller number of polynomial terms, which potentially speeds up the wavefront reconstruction. Additionally, we provide an open-source C++ library, released under the terms of the GNU General Public License version 2 (GPLv2, wherein several polynomial sets are coded. Therefore, this library constitutes a robust software alternative for wavefront reconstruction in a high energy laser field, optical surface reconstruction, and, more generally, in surface reconstruction from gradients. The library is a candidate for being integrated in control systems for optical devices, or similarly to be used in ad hoc simulations. Moreover, it has been developed with flexibility in mind, and, as such, the implementation includes the following features: (i a mock-up generator of various incident wavefronts, intended to simulate the wavefronts commonly encountered in the field of high-energy lasers production; (ii runtime selection of the library in charge of performing the algebraic computations; (iii a profiling mechanism to measure and compare the performance of different steps of the algorithms and/or third-party linear algebra libraries. Finally, the library can be easily extended to include additional dependencies, such as porting the algebraic operations to specific architectures, in order to exploit hardware acceleration features.

  9. Inference-Based Surface Reconstruction of Cluttered Environments

    KAUST Repository

    Biggers, K.; Keyser, J.

    2012-01-01

    guided by rules for fitting high-quality surface patches obtained from these prior models. We demonstrate the application of this algorithm on several example data sets containing heavy clutter and occlusion. © 2012 IEEE.

  10. Reconstructing Surface Triangulations by Their Intersection Matrices 26 September 2014

    Directory of Open Access Journals (Sweden)

    Arocha Jorge L.

    2015-08-01

    Full Text Available The intersection matrix of a simplicial complex has entries equal to the rank of the intersecction of its facets. We prove that this matrix is enough to define up to isomorphism a triangulation of a surface.

  11. Structured light optical microscopy for three-dimensional reconstruction of technical surfaces

    Science.gov (United States)

    Kettel, Johannes; Reinecke, Holger; Müller, Claas

    2016-04-01

    In microsystems technology quality control of micro structured surfaces with different surface properties is playing an ever more important role. The process of quality control incorporates three-dimensional (3D) reconstruction of specularand diffusive reflecting technical surfaces. Due to the demand on high measurement accuracy and data acquisition rates, structured light optical microscopy has become a valuable solution to solve this problem providing high vertical and lateral resolution. However, 3D reconstruction of specular reflecting technical surfaces still remains a challenge to optical measurement principles. In this paper we present a measurement principle based on structured light optical microscopy which enables 3D reconstruction of specular- and diffusive reflecting technical surfaces. It is realized using two light paths of a stereo microscope equipped with different magnification levels. The right optical path of the stereo microscope is used to project structured light onto the object surface. The left optical path is used to capture the structured illuminated object surface with a camera. Structured light patterns are generated by a Digital Light Processing (DLP) device in combination with a high power Light Emitting Diode (LED). Structured light patterns are realized as a matrix of discrete light spots to illuminate defined areas on the object surface. The introduced measurement principle is based on multiple and parallel processed point measurements. Analysis of the measured Point Spread Function (PSF) by pattern recognition and model fitting algorithms enables the precise calculation of 3D coordinates. Using exemplary technical surfaces we demonstrate the successful application of our measurement principle.

  12. PHOTOMETRIC STEREO SHAPE-AND-ALBEDO-FROM-SHADING FOR PIXEL-LEVEL RESOLUTION LUNAR SURFACE RECONSTRUCTION

    Directory of Open Access Journals (Sweden)

    W. C. Liu

    2017-07-01

    Full Text Available Shape and Albedo from Shading (SAfS techniques recover pixel-wise surface details based on the relationship between terrain slopes, illumination and imaging geometry, and the energy response (i.e., image intensity captured by the sensing system. Multiple images with different illumination geometries (i.e., photometric stereo can provide better SAfS surface reconstruction due to the increase in observations. Photometric stereo SAfS is suitable for detailed surface reconstruction of the Moon and other extra-terrestrial bodies due to the availability of photometric stereo and the less complex surface reflecting properties (i.e., albedo of the target bodies as compared to the Earth. Considering only one photometric stereo pair (i.e., two images, pixel-variant albedo is still a major obstacle to satisfactory reconstruction and it needs to be regulated by the SAfS algorithm. The illumination directional difference between the two images also becomes an important factor affecting the reconstruction quality. This paper presents a photometric stereo SAfS algorithm for pixel-level resolution lunar surface reconstruction. The algorithm includes a hierarchical optimization architecture for handling pixel-variant albedo and improving performance. With the use of Lunar Reconnaissance Orbiter Camera - Narrow Angle Camera (LROC NAC photometric stereo images, the reconstructed topography (i.e., the DEM is compared with the DEM produced independently by photogrammetric methods. This paper also addresses the effect of illumination directional difference in between one photometric stereo pair on the reconstruction quality of the proposed algorithm by both mathematical and experimental analysis. In this case, LROC NAC images under multiple illumination directions are utilized by the proposed algorithm for experimental comparison. The mathematical derivation suggests an illumination azimuthal difference of 90 degrees between two images is recommended to achieve

  13. Miniature photometric stereo system for textile surface structure reconstruction

    Science.gov (United States)

    Gorpas, Dimitris; Kampouris, Christos; Malassiotis, Sotiris

    2013-04-01

    In this work a miniature photometric stereo system is presented, targeting the three-dimensional structural reconstruction of various fabric types. This is a supportive module to a robot system, attempting to solve the well known "laundry problem". The miniature device has been designed for mounting onto the robot gripper. It is composed of a low-cost off-the-shelf camera, operating in macro mode, and eight light emitting diodes. The synchronization between image acquisition and lighting direction is controlled by an Arduino Nano board and software triggering. The ambient light has been addressed by a cylindrical enclosure. The direction of illumination is recovered by locating the reflection or the brightest point on a mirror sphere, while a flatfielding process compensates for the non-uniform illumination. For the evaluation of this prototype, the classical photometric stereo methodology has been used. The preliminary results on a large number of textiles are very promising for the successful integration of the miniature module to the robot system. The required interaction with the robot is implemented through the estimation of the Brenner's focus measure. This metric successfully assesses the focus quality with reduced time requirements in comparison to other well accepted focus metrics. Besides the targeting application, the small size of the developed system makes it a very promising candidate for applications with space restrictions, like the quality control in industrial production lines or object recognition based on structural information and in applications where easiness in operation and light-weight are required, like those in the Biomedical field, and especially in dermatology.

  14. WATER SURFACE RECONSTRUCTION IN AIRBORNE LASER BATHYMETRY FROM REDUNDANT BED OBSERVATIONS

    Directory of Open Access Journals (Sweden)

    G. Mandlburger

    2017-09-01

    Full Text Available In airborne laser bathymetry knowledge of exact water level heights is a precondition for applying run-time and refraction correction of the raw laser beam travel path in the medium water. However, due to specular reflection especially at very smooth water surfaces often no echoes from the water surface itself are recorded (drop outs. In this paper, we first discuss the feasibility of reconstructing the water surface from redundant observations of the water bottom in theory. Furthermore, we provide a first practical approach for solving this problem, suitable for static and locally planar water surfaces. It minimizes the bottom surface deviations of point clouds from individual flight strips after refraction correction. Both theoretical estimations and practical results confirm the potential of the presented method to reconstruct water level heights in dm precision. Achieving good results requires enough morphological details in the scene and that the water bottom topography is captured from different directions.

  15. Capabilities of using white x-rays for the reconstruction of surface morphology from coherent reflectivity

    Energy Technology Data Exchange (ETDEWEB)

    Sant, Tushar, E-mail: tushar@physik.uni-siegen.de [Solid State Physics Group, University of Siegen, 57068 Siegen (Germany); Panzner, Tobias [Paul Scherrer Institute (Switzerland); Pietsch, Ullrich [Solid State Physics Group, University of Siegen, 57068 Siegen (Germany)

    2010-10-15

    We present a new method to reconstruct the surface profile of a sample from coherent reflectivity data of a white x-ray beam experiment. As an example the surface profile of a laterally confined silicon wafer has been reconstructed quantitatively from static speckle measurements using white coherent x-rays from a bending magnet in the energy range between 5 < E < 20 keV. As a consequence of using white radiation, speckles appear in addition to the Airy pattern caused by scattering at the entrance pinhole. Nevertheless, the surface profile of a triangularly shaped specimen was reconstructed considering sufficient oversampling between the beam-footprint and the effective sample width. For the profile reconstruction the Error-Reduction phase retrieval algorithm was modified by including the spectral illumination function and a Fresnel propagator term. The simultaneous use of different x-ray energies having different penetration depth provides information on the evolution of the surface profile from the near-surface towards the bulk. The limitations of present experiment can be overcome using white or pink radiation from a source with higher photon flux.

  16. Surface reconstruction: An effective method for the growth of mismatched materials

    Energy Technology Data Exchange (ETDEWEB)

    Sun, Yu; Zheng, Beining; Wu, Xiaofeng; Yuan, Long; Wu, Jie; Guo, Hongping; Huang, Keke; Feng, Shouhua, E-mail: shfeng@mail.jlu.edu.cn

    2016-01-01

    Graphical abstract: High quality thin film of GaSb was fabricated with molecular beam epitaxy technique on the reconstructed Si(1 1 1) surface. - Highlights: • Surface reconstruction formed by different surface treatments controls the heteroepitaxial growth. • Mismatched stress can be effectively released when the mismatched material epi-film tilts out of the epitaxial interface plane to create a coincidence-site lattice. • GaSb films grown on Si(1 1 1)-(5√3 × 5√3)-Sb surface show better crystal quality and morphology for its self-assembled 2D fishbone structure. - Abstract: The crystalline quality of epitaxial films depends on the degree of lattice match between substrates and films. Here, we report a growth strategy for large mismatched epi-films to grow GaSb films on Si(1 1 1) substrates. The epitaxial strategy can be influenced by controlling the surface reconstructions of Sb-treated Si(1 1 1). The film with the best quality was grown on Si(1 1 1)-(5√3 × 5√3)-Sb surface due to the stress release and the formation of a self-assembled 2D fishbone structure. Controlled surface engineering provides an effective pathway towards the growth of the large mismatched materials.

  17. SU-E-T-362: Automatic Catheter Reconstruction of Flap Applicators in HDR Surface Brachytherapy

    International Nuclear Information System (INIS)

    Buzurovic, I; Devlin, P; Hansen, J; O'Farrell, D; Bhagwat, M; Friesen, S; Damato, A; Lewis, J; Cormack, R

    2014-01-01

    Purpose: Catheter reconstruction is crucial for the accurate delivery of radiation dose in HDR brachytherapy. The process becomes complicated and time-consuming for large superficial clinical targets with a complex topology. A novel method for the automatic catheter reconstruction of flap applicators is proposed in this study. Methods: We have developed a program package capable of image manipulation, using C++class libraries of The-Visualization-Toolkit(VTK) software system. The workflow for automatic catheter reconstruction is: a)an anchor point is placed in 3D or in the axial view of the first slice at the tip of the first, last and middle points for the curved surface; b)similar points are placed on the last slice of the image set; c)the surface detection algorithm automatically registers the points to the images and applies the surface reconstruction filter; d)then a structured grid surface is generated through the center of the treatment catheters placed at a distance of 5mm from the patient's skin. As a result, a mesh-style plane is generated with the reconstructed catheters placed 10mm apart. To demonstrate automatic catheter reconstruction, we used CT images of patients diagnosed with cutaneous T-cell-lymphoma and imaged with Freiburg-Flap-Applicators (Nucletron™-Elekta, Netherlands). The coordinates for each catheter were generated and compared to the control points selected during the manual reconstruction for 16catheters and 368control point Results: The variation of the catheter tip positions between the automatically and manually reconstructed catheters was 0.17mm(SD=0.23mm). The position difference between the manually selected catheter control points and the corresponding points obtained automatically was 0.17mm in the x-direction (SD=0.23mm), 0.13mm in the y-direction (SD=0.22mm), and 0.14mm in the z-direction (SD=0.24mm). Conclusion: This study shows the feasibility of the automatic catheter reconstruction of flap applicators with a high

  18. Calibration-free quantitative surface topography reconstruction in scanning electron microscopy

    NARCIS (Netherlands)

    Faber, E.T.; Martinez-Martinez, D.; Mansilla, C.; Ocelik, V.; De Hosson, J. Th. M.

    This work presents a new approach to obtain reliable surface topography reconstructions from 2D Scanning Electron Microscopy (SEM) images. In this method a set of images taken at different tilt angles are compared by means of digital image correlation (DlC). It is argued that the strength of the

  19. Evolutionary computation applied to the reconstruction of 3-D surface topography in the SEM.

    Science.gov (United States)

    Kodama, Tetsuji; Li, Xiaoyuan; Nakahira, Kenji; Ito, Dai

    2005-10-01

    A genetic algorithm has been applied to the line profile reconstruction from the signals of the standard secondary electron (SE) and/or backscattered electron detectors in a scanning electron microscope. This method solves the topographical surface reconstruction problem as one of combinatorial optimization. To extend this optimization approach for three-dimensional (3-D) surface topography, this paper considers the use of a string coding where a 3-D surface topography is represented by a set of coordinates of vertices. We introduce the Delaunay triangulation, which attains the minimum roughness for any set of height data to capture the fundamental features of the surface being probed by an electron beam. With this coding, the strings are processed with a class of hybrid optimization algorithms that combine genetic algorithms and simulated annealing algorithms. Experimental results on SE images are presented.

  20. Ab initio-based approach to reconstruction, adsorption and incorporation on GaN surfaces

    International Nuclear Information System (INIS)

    Ito, T; Akiyama, T; Nakamura, K

    2012-01-01

    Reconstruction, adsorption and incorporation on various GaN surfaces are systematically investigated using an ab initio-based approach that predicts the surface phase diagram as functions of temperature and beam-equivalent pressure (BEP). The calculated results for GaN surface reconstructions with polar (0 0 0 1), nonpolar (1 1 −2 0), semipolar (1 −1 0 1) and semipolar (1 1 −2 2) orientations imply that reconstructions on GaN surfaces with Ga adlayers generally appear on the polar and the semipolar surfaces, while the stable ideal surface without Ga adsorption is found on the nonpolar GaN(1 1 −2 0) surface because it satisfies the electron counting rule. The hydrogen adsorption on GaN(0 0 0 1) and GaN(1 1 −2 0) realizes several surface structures forming N–H and Ga–NH 2 bonds on their surfaces that depend on temperature and Ga BEP during metal-organic vapor-phase epitaxy (MOVPE). In contrast, the stable structures due to hydrogen adsorption on the semipolar GaN(1 −1 0 1) and GaN(1 1 −2 2) surfaces are not varied over the wide range of temperature and Ga BEP. This implies that the hydrogen adsorbed stable structures are expected to emerge on the semipolar surfaces during MOVPE regardless of the growth conditions. Furthermore, we clarify that Mg incorporation on GaN(1 −1 0 1) surfaces is enhanced by hydrogen adsorption consistent with experimental findings

  1. Comprehensive Use of Curvature for Robust and Accurate Online Surface Reconstruction.

    Science.gov (United States)

    Lefloch, Damien; Kluge, Markus; Sarbolandi, Hamed; Weyrich, Tim; Kolb, Andreas

    2017-12-01

    Interactive real-time scene acquisition from hand-held depth cameras has recently developed much momentum, enabling applications in ad-hoc object acquisition, augmented reality and other fields. A key challenge to online reconstruction remains error accumulation in the reconstructed camera trajectory, due to drift-inducing instabilities in the range scan alignments of the underlying iterative-closest-point (ICP) algorithm. Various strategies have been proposed to mitigate that drift, including SIFT-based pre-alignment, color-based weighting of ICP pairs, stronger weighting of edge features, and so on. In our work, we focus on surface curvature as a feature that is detectable on range scans alone and hence does not depend on accurate multi-sensor alignment. In contrast to previous work that took curvature into consideration, however, we treat curvature as an independent quantity that we consistently incorporate into every stage of the real-time reconstruction pipeline, including densely curvature-weighted ICP, range image fusion, local surface reconstruction, and rendering. Using multiple benchmark sequences, and in direct comparison to other state-of-the-art online acquisition systems, we show that our approach significantly reduces drift, both when analyzing individual pipeline stages in isolation, as well as seen across the online reconstruction pipeline as a whole.

  2. The Application of Three-Dimensional Surface Imaging System in Plastic and Reconstructive Surgery.

    Science.gov (United States)

    Li, Yanqi; Yang, Xin; Li, Dong

    2016-02-01

    Three-dimensional (3D) surface imaging system has gained popularity worldwide in clinical application. Unlike computed tomography and magnetic resonance imaging, it has the ability to capture 3D images with both shape and texture information. This feature has made it quite useful for plastic surgeons. This review article is mainly focusing on demonstrating the current status and analyzing the future of the application of 3D surface imaging systems in plastic and reconstructive surgery.Currently, 3D surface imaging system is mainly used in plastic and reconstructive surgery to help improve the reliability of surgical planning and assessing surgical outcome objectively. There have already been reports of its using on plastic and reconstructive surgery from head to toe. Studies on facial aging process, online applications development, and so on, have also been done through the use of 3D surface imaging system.Because different types of 3D surface imaging devices have their own advantages and disadvantages, a basic knowledge of their features is required and careful thought should be taken to choose the one that best fits a surgeon's demand.In the future, by integrating with other imaging tools and the 3D printing technology, 3D surface imaging system will play an important role in individualized surgical planning, implants production, meticulous surgical simulation, operative techniques training, and patient education.

  3. Reconstruction Accuracy Assessment of Surface and Underwater 3D Motion Analysis: A New Approach

    Directory of Open Access Journals (Sweden)

    Kelly de Jesus

    2015-01-01

    Full Text Available This study assessed accuracy of surface and underwater 3D reconstruction of a calibration volume with and without homography. A calibration volume (6000 × 2000 × 2500 mm with 236 markers (64 above and 88 underwater control points—with 8 common points at water surface—and 92 validation points was positioned on a 25 m swimming pool and recorded with two surface and four underwater cameras. Planar homography estimation for each calibration plane was computed to perform image rectification. Direct linear transformation algorithm for 3D reconstruction was applied, using 1600000 different combinations of 32 and 44 points out of the 64 and 88 control points for surface and underwater markers (resp.. Root Mean Square (RMS error with homography of control and validations points was lower than without it for surface and underwater cameras (P≤0.03. With homography, RMS errors of control and validation points were similar between surface and underwater cameras (P≥0.47. Without homography, RMS error of control points was greater for underwater than surface cameras (P≤0.04 and the opposite was observed for validation points (P≤0.04. It is recommended that future studies using 3D reconstruction should include homography to improve swimming movement analysis accuracy.

  4. A hybrid 3D SEM reconstruction method optimized for complex geologic material surfaces.

    Science.gov (United States)

    Yan, Shang; Adegbule, Aderonke; Kibbey, Tohren C G

    2017-08-01

    Reconstruction methods are widely used to extract three-dimensional information from scanning electron microscope (SEM) images. This paper presents a new hybrid reconstruction method that combines stereoscopic reconstruction with shape-from-shading calculations to generate highly-detailed elevation maps from SEM image pairs. The method makes use of an imaged glass sphere to determine the quantitative relationship between observed intensity and angles between the beam and surface normal, and the detector and surface normal. Two specific equations are derived to make use of image intensity information in creating the final elevation map. The equations are used together, one making use of intensities in the two images, the other making use of intensities within a single image. The method is specifically designed for SEM images captured with a single secondary electron detector, and is optimized to capture maximum detail from complex natural surfaces. The method is illustrated with a complex structured abrasive material, and a rough natural sand grain. Results show that the method is capable of capturing details such as angular surface features, varying surface roughness, and surface striations. Copyright © 2017 Elsevier Ltd. All rights reserved.

  5. Surface topography characterization using 3D stereoscopic reconstruction of SEM images

    Science.gov (United States)

    Vedantha Krishna, Amogh; Flys, Olena; Reddy, Vijeth V.; Rosén, B. G.

    2018-06-01

    A major drawback of the optical microscope is its limitation to resolve finer details. Many microscopes have been developed to overcome the limitations set by the diffraction of visible light. The scanning electron microscope (SEM) is one such alternative: it uses electrons for imaging, which have much smaller wavelength than photons. As a result high magnification with superior image resolution can be achieved. However, SEM generates 2D images which provide limited data for surface measurements and analysis. Often many research areas require the knowledge of 3D structures as they contribute to a comprehensive understanding of microstructure by allowing effective measurements and qualitative visualization of the samples under study. For this reason, stereo photogrammetry technique is employed to convert SEM images into 3D measurable data. This paper aims to utilize a stereoscopic reconstruction technique as a reliable method for characterization of surface topography. Reconstructed results from SEM images are compared with coherence scanning interferometer (CSI) results obtained by measuring a roughness reference standard sample. This paper presents a method to select the most robust/consistent surface texture parameters that are insensitive to the uncertainties involved in the reconstruction technique itself. Results from the two-stereoscopic reconstruction algorithms are also documented in this paper.

  6. Absence of surface stress change during pentacene thin film growth on the Si(111)-(7 x 7) surface: a buried reconstruction interface

    International Nuclear Information System (INIS)

    Kury, P; Horn von Hoegen, M; Heringdorf, F-J Meyer zu; Roos, K R

    2008-01-01

    We use high-resolution surface stress measurements to monitor the surface stress during the growth of pentacene (C 22 H 14 ) on the (7x7) reconstructed silicon (111) surface. No significant change in the surface stress is observed during the pentacene growth. Compared to the changes in the surface stress observed for Si and Ge deposition on the Si(111)-(7x7) surface, the insignificant change in the surface stress observed for the pentacene growth suggests that the pentacene molecules of the first adsorbate layer, although forming strong covalent bonds with the Si adatoms, do not alter the structure of the (7x7) reconstruction. The (7x7) reconstruction remains intact and, with subsequent deposition of pentacene, eventually becomes buried under the growing film. This failure of the pentacene to affect the structure of the reconstruction may represent a fundamental difference between the growth of organic thin films and that of inorganic thin films on semiconductor surfaces

  7. Technique of semiautomatic surface reconstruction of the visible Korean human data using commercial software.

    Science.gov (United States)

    Park, Jin Seo; Shin, Dong Sun; Chung, Min Suk; Hwang, Sung Bae; Chung, Jinoh

    2007-11-01

    This article describes the technique of semiautomatic surface reconstruction of anatomic structures using widely available commercial software. This technique would enable researchers to promptly and objectively perform surface reconstruction, creating three-dimensional anatomic images without any assistance from computer engineers. To develop the technique, we used data from the Visible Korean Human project, which produced digitalized photographic serial images of an entire cadaver. We selected 114 anatomic structures (skin [1], bones [32], knee joint structures [7], muscles [60], arteries [7], and nerves [7]) from the 976 anatomic images which were generated from the left lower limb of the cadaver. Using Adobe Photoshop, the selected anatomic structures in each serial image were outlined, creating a segmented image. The Photoshop files were then converted into Adobe Illustrator files to prepare isolated segmented images, so that the contours of the structure could be viewed independent of the surrounding anatomy. Using Alias Maya, these isolated segmented images were then stacked to construct a contour image. Gaps between the contour lines were filled with surfaces, and three-dimensional surface reconstruction could be visualized with Rhinoceros. Surface imperfections were then corrected to complete the three-dimensional images in Alias Maya. We believe that the three-dimensional anatomic images created by these methods will have widespread application in both medical education and research. 2007 Wiley-Liss, Inc

  8. Design of an experimental four-camera setup for enhanced 3D surface reconstruction in microsurgery

    Directory of Open Access Journals (Sweden)

    Marzi Christian

    2017-09-01

    Full Text Available Future fully digital surgical visualization systems enable a wide range of new options. Caused by optomechanical limitations a main disadvantage of today’s surgical microscopes is their incapability of providing arbitrary perspectives to more than two observers. In a fully digital microscopic system, multiple arbitrary views can be generated from a 3D reconstruction. Modern surgical microscopes allow replacing the eyepieces by cameras in order to record stereoscopic videos. A reconstruction from these videos can only contain the amount of detail the recording camera system gathers from the scene. Therefore, covered surfaces can result in a faulty reconstruction for deviating stereoscopic perspectives. By adding cameras recording the object from different angles, additional information of the scene is acquired, allowing to improve the reconstruction. Our approach is to use a fixed four-camera setup as a front-end system to capture enhanced 3D topography of a pseudo-surgical scene. This experimental setup would provide images for the reconstruction algorithms and generation of multiple observing stereo perspectives. The concept of the designed setup is based on the common main objective (CMO principle of current surgical microscopes. These systems are well established and optically mature. Furthermore, the CMO principle allows a more compact design and a lowered effort in calibration than cameras with separate optics. Behind the CMO four pupils separate the four channels which are recorded by one camera each. The designed system captures an area of approximately 28mm × 28mm with four cameras. Thus, allowing to process images of 6 different stereo perspectives. In order to verify the setup, it is modelled in silico. It can be used in further studies to test algorithms for 3D reconstruction from up to four perspectives and provide information about the impact of additionally recorded perspectives on the enhancement of a reconstruction.

  9. A Novel Hybrid Model for Drawing Trace Reconstruction from Multichannel Surface Electromyographic Activity.

    Science.gov (United States)

    Chen, Yumiao; Yang, Zhongliang

    2017-01-01

    Recently, several researchers have considered the problem of reconstruction of handwriting and other meaningful arm and hand movements from surface electromyography (sEMG). Although much progress has been made, several practical limitations may still affect the clinical applicability of sEMG-based techniques. In this paper, a novel three-step hybrid model of coordinate state transition, sEMG feature extraction and gene expression programming (GEP) prediction is proposed for reconstructing drawing traces of 12 basic one-stroke shapes from multichannel surface electromyography. Using a specially designed coordinate data acquisition system, we recorded the coordinate data of drawing traces collected in accordance with the time series while 7-channel EMG signals were recorded. As a widely-used time domain feature, Root Mean Square (RMS) was extracted with the analysis window. The preliminary reconstruction models can be established by GEP. Then, the original drawing traces can be approximated by a constructed prediction model. Applying the three-step hybrid model, we were able to convert seven channels of EMG activity recorded from the arm muscles into smooth reconstructions of drawing traces. The hybrid model can yield a mean accuracy of 74% in within-group design (one set of prediction models for all shapes) and 86% in between-group design (one separate set of prediction models for each shape), averaged for the reconstructed x and y coordinates. It can be concluded that it is feasible for the proposed three-step hybrid model to improve the reconstruction ability of drawing traces from sEMG.

  10. Probabilistic surface reconstruction from multiple data sets: An example for the Australian Moho

    Science.gov (United States)

    Bodin, T.; Salmon, M.; Kennett, B. L. N.; Sambridge, M.

    2012-10-01

    Interpolation of spatial data is a widely used technique across the Earth sciences. For example, the thickness of the crust can be estimated by different active and passive seismic source surveys, and seismologists reconstruct the topography of the Moho by interpolating these different estimates. Although much research has been done on improving the quantity and quality of observations, the interpolation algorithms utilized often remain standard linear regression schemes, with three main weaknesses: (1) the level of structure in the surface, or smoothness, has to be predefined by the user; (2) different classes of measurements with varying and often poorly constrained uncertainties are used together, and hence it is difficult to give appropriate weight to different data types with standard algorithms; (3) there is typically no simple way to propagate uncertainties in the data to uncertainty in the estimated surface. Hence the situation can be expressed by Mackenzie (2004): "We use fantastic telescopes, the best physical models, and the best computers. The weak link in this chain is interpreting our data using 100 year old mathematics". Here we use recent developments made in Bayesian statistics and apply them to the problem of surface reconstruction. We show how the reversible jump Markov chain Monte Carlo (rj-McMC) algorithm can be used to let the degree of structure in the surface be directly determined by the data. The solution is described in probabilistic terms, allowing uncertainties to be fully accounted for. The method is illustrated with an application to Moho depth reconstruction in Australia.

  11. Three-dimensional reconstruction of fracture surfaces of CFRP type composite materials

    International Nuclear Information System (INIS)

    Lobo, Raquel de Moraes

    2009-01-01

    The three-dimensional reconstruction of fracture surfaces of CFRP type composite materials is presented in this work as a possible method for the fractographic analysis of this material, whose rupture surface can present an accentuated roughness, with great variation in height. Two methods are presented for this purpose: the reconstruction for variable focus, carried through with images of optic microscopy and the reconstruction for parallax, carried through with pair of stereo images, obtained by means of scanning electronic microscopy. An evaluation is carried through for each one of the two methods, having argued its limits and the efficiency of each one of them, before the difficulties of analysis of unidirectional and multidirectional composite materials. The method of variable focus presented an excellent reconstruction result, but it has the need of a great number of images, spent time of the instrument and magnifying limit of the images as factors to be considered in the choice of better method. The tilting of the specimen, during the parallax method, discloses alterations in the histograms of the images acquired in the clockwise direction that limit the use of the method for materials with high roughness. The acquiring of images in only one direction and the construction of a region of interest, located in the center of the image are suggestions to turn the method most including. The linearity of the projections of features in the inclined image also suggests the possibility to carry through the reconstruction using, instead of only two, multiple images gotten in the counter-clockwise direction. The alterations proposals to modify the routine, are suggested so that the program can be applied in a more comprehensive form, independent of the quality of the observed fracture surface. (author)

  12. Active illumination based 3D surface reconstruction and registration for image guided medialization laryngoplasty

    Science.gov (United States)

    Jin, Ge; Lee, Sang-Joon; Hahn, James K.; Bielamowicz, Steven; Mittal, Rajat; Walsh, Raymond

    2007-03-01

    The medialization laryngoplasty is a surgical procedure to improve the voice function of the patient with vocal fold paresis and paralysis. An image guided system for the medialization laryngoplasty will help the surgeons to accurately place the implant and thus reduce the failure rates of the surgery. One of the fundamental challenges in image guided system is to accurately register the preoperative radiological data to the intraoperative anatomical structure of the patient. In this paper, we present a combined surface and fiducial based registration method to register the preoperative 3D CT data to the intraoperative surface of larynx. To accurately model the exposed surface area, a structured light based stereo vision technique is used for the surface reconstruction. We combined the gray code pattern and multi-line shifting to generate the intraoperative surface of the larynx. To register the point clouds from the intraoperative stage to the preoperative 3D CT data, a shape priori based ICP method is proposed to quickly register the two surfaces. The proposed approach is capable of tracking the fiducial markers and reconstructing the surface of larynx with no damage to the anatomical structure. We used off-the-shelf digital cameras, LCD projector and rapid 3D prototyper to develop our experimental system. The final RMS error in the registration is less than 1mm.

  13. Surface reconstruction processes in MO VPE grown GaAs layers

    Czech Academy of Sciences Publication Activity Database

    Nohavica, Dušan

    1999-01-01

    Roč. 50, 2/s (1999), s. 24-25 ISSN 1335-3632. [Development of Materials Science in Research and Education - DMS -RE 1998 /8./. Zlenice, 08.09.1998-10.09.1998] R&D Projects: GA AV ČR IAA2067901 Institutional research plan: CEZ:AV0Z2067918 Keywords : epitaxial growth * surface reconstruction Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering

  14. Reconstruction of surface morphology from coherent scattering of white x-ray radiation

    Energy Technology Data Exchange (ETDEWEB)

    Sant, Tushar; Pietsch, Ullrich [Solid State Physics Group, University of Siegen, 57068 Siegen (Germany)

    2009-07-01

    Static speckle experiments were performed using coherent white X-ray radiation from a bending magnet at BESSYII. Semiconductor and polymer surfaces were investigated under incidence condition smaller than the critical angle of total external reflection. The scattering pattern of the sample results from the illumination function modified by the surface roughness. The periodic oscillations are caused by the illumination function whereas other irregular features are associated with sample surface. The speckle map of reflection from a laterally periodic structure like GaAs grating is studied. Under coherent illumination the grating peaks split into speckles because of fluctuations on the sample surface. The surface morphology can be reconstructed using phase retrieval algorithms. In case of 1D problem, these algorithms rarely yield a unique and converging solution. The algorithm is modified to contain additional propagator term and the phase of illumination function in the real space constraint. The modified algorithm converges faster than conventional algorithms. A detailed surface profiles from the real measurements of the sample are reconstructed using this algorithm.

  15. Generalized configurations of the reconstruction and hologram surface in digital holography

    International Nuclear Information System (INIS)

    Frere, C.

    1988-01-01

    Approximations are introduced for calculating the complex amplitude in holography, so that diffraction effects from curved lines and from the hologram surface are negligible. These effects are estimated. In the one-dimensional case, the calculation was made by the steady-phase method, with a weaker condition than the Fresnel condition. The one-dimensional transparency is exemplarily on straight, sinusoidal and elliptic lines while plane and cylindrical surfaces are chosen for the hologram surface. In the two-dimensional case, a numerical calculation is carried out using the fast Fourier transformation algorithm, and with a condition similar to the Fresnel condition. Compared with the transparency distribution, this method yields slightly disturbed reconstruction distributions. Inclined planes and cylindrical surfaces were chosen as hologram surfaces. The calculated complex amplitudes were encoded and materialized in a computer-supported hologram. (orig./DG) [de

  16. Torso geometry reconstruction and body surface electrode localization using three-dimensional photography.

    Science.gov (United States)

    Perez-Alday, Erick A; Thomas, Jason A; Kabir, Muammar; Sedaghat, Golriz; Rogovoy, Nichole; van Dam, Eelco; van Dam, Peter; Woodward, William; Fuss, Cristina; Ferencik, Maros; Tereshchenko, Larisa G

    We conducted a prospective clinical study (n=14; 29% female) to assess the accuracy of a three-dimensional (3D) photography-based method of torso geometry reconstruction and body surface electrodes localization. The position of 74 body surface electrocardiographic (ECG) electrodes (diameter 5mm) was defined by two methods: 3D photography, and CT (marker diameter 2mm) or MRI (marker size 10×20mm) imaging. Bland-Altman analysis showed good agreement in X (bias -2.5 [95% limits of agreement (LoA) -19.5 to 14.3] mm), Y (bias -0.1 [95% LoA -14.1 to 13.9] mm), and Z coordinates (bias -0.8 [95% LoA -15.6 to 14.2] mm), as defined by the CT/MRI imaging, and 3D photography. The average Hausdorff distance between the two torso geometry reconstructions was 11.17±3.05mm. Thus, accurate torso geometry reconstruction using 3D photography is feasible. Body surface ECG electrodes coordinates as defined by the CT/MRI imaging, and 3D photography, are in good agreement. Copyright © 2017 Elsevier Inc. All rights reserved.

  17. Mn induced 1 × 2 reconstruction in the τ-MnAl(0 0 1) surface

    Science.gov (United States)

    Guerrero-Sánchez, J.; Takeuchi, Noboru

    2018-05-01

    We report on first principles total energy calculations to describe the structural, electronic and magnetic properties of MnAl(0 0 1) surfaces. We have concentrated in structural models having 1 × 1 and 1 × 2 periodicities, since recent experiments of the similar MnGa(0 0 1) surface have found 1 × 1 and 1 × 2 reconstructions. Our calculations show the existence of two stable structures for different ranges of chemical potential. A 1 × 1 surface is stable for Al-rich conditions, whereas a Mn-induced 1 × 2 reconstruction appears after increasing the Mn chemical potential up to Mn-rich conditions. It is important to notice that experimentally, Mn rich conditions are important for improved magnetic properties. The Mn layers in both structures have ferromagnetic arrangements, but they are aligned antiferromagnetically with the almost no magnetic Al atoms. Moreover, the on top Mn atoms, which produce the 1 × 2 reconstruction, align antiferromagnetically with the second layer Mn atoms. These findings are similar to those obtained experimentally in MnGa thin films grown by molecular beam epitaxy. Therefore, this method could also be used to grow the proposed MnAl films.

  18. On the reconstruction of the surface structure of the spotted stars

    Science.gov (United States)

    Kolbin, A. I.; Shimansky, V. V.; Sakhibullin, N. A.

    2013-07-01

    We have developed and tested a light-curve inversion technique for photometric mapping of spotted stars. The surface of a spotted star is partitioned into small area elements, over which a search is carried out for the intensity distribution providing the best agreement between the observed and model light curves within a specified uncertainty. We have tested mapping techniques based on the use of both a single light curve and several light curves obtained in different photometric bands. Surface reconstruction artifacts due to the ill-posed nature of the problem have been identified.

  19. A Hierarchical Building Segmentation in Digital Surface Models for 3D Reconstruction

    Directory of Open Access Journals (Sweden)

    Yiming Yan

    2017-01-01

    Full Text Available In this study, a hierarchical method for segmenting buildings in a digital surface model (DSM, which is used in a novel framework for 3D reconstruction, is proposed. Most 3D reconstructions of buildings are model-based. However, the limitations of these methods are overreliance on completeness of the offline-constructed models of buildings, and the completeness is not easily guaranteed since in modern cities buildings can be of a variety of types. Therefore, a model-free framework using high precision DSM and texture-images buildings was introduced. There are two key problems with this framework. The first one is how to accurately extract the buildings from the DSM. Most segmentation methods are limited by either the terrain factors or the difficult choice of parameter-settings. A level-set method are employed to roughly find the building regions in the DSM, and then a recently proposed ‘occlusions of random textures model’ are used to enhance the local segmentation of the buildings. The second problem is how to generate the facades of buildings. Synergizing with the corresponding texture-images, we propose a roof-contour guided interpolation of building facades. The 3D reconstruction results achieved by airborne-like images and satellites are compared. Experiments show that the segmentation method has good performance, and 3D reconstruction is easily performed by our framework, and better visualization results can be obtained by airborne-like images, which can be further replaced by UAV images.

  20. Reconstruction of Daily Sea Surface Temperature Based on Radial Basis Function Networks

    Directory of Open Access Journals (Sweden)

    Zhihong Liao

    2017-11-01

    Full Text Available A radial basis function network (RBFN method is proposed to reconstruct daily Sea surface temperatures (SSTs with limited SST samples. For the purpose of evaluating the SSTs using this method, non-biased SST samples in the Pacific Ocean (10°N–30°N, 115°E–135°E are selected when the tropical storm Hagibis arrived in June 2014, and these SST samples are obtained from the Reynolds optimum interpolation (OI v2 daily 0.25° SST (OISST products according to the distribution of AVHRR L2p SST and in-situ SST data. Furthermore, an improved nearest neighbor cluster (INNC algorithm is designed to search for the optimal hidden knots for RBFNs from both the SST samples and the background fields. Then, the reconstructed SSTs from the RBFN method are compared with the results from the OI method. The statistical results show that the RBFN method has a better performance of reconstructing SST than the OI method in the study, and that the average RMSE is 0.48 °C for the RBFN method, which is quite smaller than the value of 0.69 °C for the OI method. Additionally, the RBFN methods with different basis functions and clustering algorithms are tested, and we discover that the INNC algorithm with multi-quadric function is quite suitable for the RBFN method to reconstruct SSTs when the SST samples are sparsely distributed.

  1. Novel Low Cost 3D Surface Model Reconstruction System for Plant Phenotyping

    Directory of Open Access Journals (Sweden)

    Suxing Liu

    2017-09-01

    Full Text Available Accurate high-resolution three-dimensional (3D models are essential for a non-invasive analysis of phenotypic characteristics of plants. Previous limitations in 3D computer vision algorithms have led to a reliance on volumetric methods or expensive hardware to record plant structure. We present an image-based 3D plant reconstruction system that can be achieved by using a single camera and a rotation stand. Our method is based on the structure from motion method, with a SIFT image feature descriptor. In order to improve the quality of the 3D models, we segmented the plant objects based on the PlantCV platform. We also deducted the optimal number of images needed for reconstructing a high-quality model. Experiments showed that an accurate 3D model of the plant was successfully could be reconstructed by our approach. This 3D surface model reconstruction system provides a simple and accurate computational platform for non-destructive, plant phenotyping.

  2. LOGISMOS-B for primates: primate cortical surface reconstruction and thickness measurement

    Science.gov (United States)

    Oguz, Ipek; Styner, Martin; Sanchez, Mar; Shi, Yundi; Sonka, Milan

    2015-03-01

    Cortical thickness and surface area are important morphological measures with implications for many psychiatric and neurological conditions. Automated segmentation and reconstruction of the cortical surface from 3D MRI scans is challenging due to the variable anatomy of the cortex and its highly complex geometry. While many methods exist for this task in the context of the human brain, these methods are typically not readily applicable to the primate brain. We propose an innovative approach based on our recently proposed human cortical reconstruction algorithm, LOGISMOS-B, and the Laplace-based thickness measurement method. Quantitative evaluation of our approach was performed based on a dataset of T1- and T2-weighted MRI scans from 12-month-old macaques where labeling by our anatomical experts was used as independent standard. In this dataset, LOGISMOS-B has an average signed surface error of 0.01 +/- 0.03mm and an unsigned surface error of 0.42 +/- 0.03mm over the whole brain. Excluding the rather problematic temporal pole region further improves unsigned surface distance to 0.34 +/- 0.03mm. This high level of accuracy reached by our algorithm even in this challenging developmental dataset illustrates its robustness and its potential for primate brain studies.

  3. Quantitative roughness characterization and 3D reconstruction of electrode surface using cyclic voltammetry and SEM image

    Energy Technology Data Exchange (ETDEWEB)

    Dhillon, Shweta; Kant, Rama, E-mail: rkant@chemistry.du.ac.in

    2013-10-01

    Area measurements from cyclic voltammetry (CV) and image from scanning electron microscopy (SEM) are used to characterize electrode statistical morphology, 3D surface reconstruction and its electroactivity. SEM images of single phased materials correspond to two-dimensional (2D) projections of 3D structures, leading to an incomplete characterization. Lack of third dimension information in SEM image is circumvented using equivalence between denoised SEM image and CV area measurements. This CV-SEM method can be used to estimate power spectral density (PSD), width, gradient, finite fractal nature of roughness and local morphology of the electrode. We show that the surface morphological statistical property like distribution function of gradient can be related to local electro-activity. Electrode surface gradient micrographs generated here can provide map of electro-activity sites. Finally, the densely and uniformly packed small gradient over the Pt-surface is the determining criterion for high intrinsic electrode activity.

  4. Quantitative roughness characterization and 3D reconstruction of electrode surface using cyclic voltammetry and SEM image

    International Nuclear Information System (INIS)

    Dhillon, Shweta; Kant, Rama

    2013-01-01

    Area measurements from cyclic voltammetry (CV) and image from scanning electron microscopy (SEM) are used to characterize electrode statistical morphology, 3D surface reconstruction and its electroactivity. SEM images of single phased materials correspond to two-dimensional (2D) projections of 3D structures, leading to an incomplete characterization. Lack of third dimension information in SEM image is circumvented using equivalence between denoised SEM image and CV area measurements. This CV-SEM method can be used to estimate power spectral density (PSD), width, gradient, finite fractal nature of roughness and local morphology of the electrode. We show that the surface morphological statistical property like distribution function of gradient can be related to local electro-activity. Electrode surface gradient micrographs generated here can provide map of electro-activity sites. Finally, the densely and uniformly packed small gradient over the Pt-surface is the determining criterion for high intrinsic electrode activity.

  5. Reconstruction of solar spectral surface UV irradiances using radiative transfer simulations.

    Science.gov (United States)

    Lindfors, Anders; Heikkilä, Anu; Kaurola, Jussi; Koskela, Tapani; Lakkala, Kaisa

    2009-01-01

    UV radiation exerts several effects concerning life on Earth, and spectral information on the prevailing UV radiation conditions is needed in order to study each of these effects. In this paper, we present a method for reconstruction of solar spectral UV irradiances at the Earth's surface. The method, which is a further development of an earlier published method for reconstruction of erythemally weighted UV, relies on radiative transfer simulations, and takes as input (1) the effective cloud optical depth as inferred from pyranometer measurements of global radiation (300-3000 nm); (2) the total ozone column; (3) the surface albedo as estimated from measurements of snow depth; (4) the total water vapor column; and (5) the altitude of the location. Reconstructed daily cumulative spectral irradiances at Jokioinen and Sodankylä in Finland are, in general, in good agreement with measurements. The mean percentage difference, for instance, is mostly within +/-8%, and the root mean square of the percentage difference is around 10% or below for wavelengths over 310 nm and daily minimum solar zenith angles (SZA) less than 70 degrees . In this study, we used pseudospherical radiative transfer simulations, which were shown to improve the performance of our method under large SZA (low Sun).

  6. Calibration-free quantitative surface topography reconstruction in scanning electron microscopy

    International Nuclear Information System (INIS)

    Faber, E.T.; Martinez-Martinez, D.; Mansilla, C.; Ocelík, V.; Hosson, J.Th.M. De

    2015-01-01

    This work presents a new approach to obtain reliable surface topography reconstructions from 2D Scanning Electron Microscopy (SEM) images. In this method a set of images taken at different tilt angles are compared by means of digital image correlation (DIC). It is argued that the strength of the method lies in the fact that precise knowledge about the nature of the rotation (vector and/or magnitude) is not needed. Therefore, the great advantage is that complex calibrations of the measuring equipment are avoided. The paper presents the necessary equations involved in the methods, including derivations and solutions. The method is illustrated with examples of 3D reconstructions followed by a discussion on the relevant experimental parameters. - Highlights: • A novel method for quantitative 3D surface reconstruction in SEM is described. • This method uses at least 3 SEM images acquired at different sample tilts. • This method does not need calibration from the movement of the sample holder. • Mathematical background and examples of application are presented

  7. A Lightweight Surface Reconstruction Method for Online 3D Scanning Point Cloud Data Oriented toward 3D Printing

    Directory of Open Access Journals (Sweden)

    Buyun Sheng

    2018-01-01

    Full Text Available The existing surface reconstruction algorithms currently reconstruct large amounts of mesh data. Consequently, many of these algorithms cannot meet the efficiency requirements of real-time data transmission in a web environment. This paper proposes a lightweight surface reconstruction method for online 3D scanned point cloud data oriented toward 3D printing. The proposed online lightweight surface reconstruction algorithm is composed of a point cloud update algorithm (PCU, a rapid iterative closest point algorithm (RICP, and an improved Poisson surface reconstruction algorithm (IPSR. The generated lightweight point cloud data are pretreated using an updating and rapid registration method. The Poisson surface reconstruction is also accomplished by a pretreatment to recompute the point cloud normal vectors; this approach is based on a least squares method, and the postprocessing of the PDE patch generation was based on biharmonic-like fourth-order PDEs, which effectively reduces the amount of reconstructed mesh data and improves the efficiency of the algorithm. This method was verified using an online personalized customization system that was developed with WebGL and oriented toward 3D printing. The experimental results indicate that this method can generate a lightweight 3D scanning mesh rapidly and efficiently in a web environment.

  8. Calibration-free quantitative surface topography reconstruction in scanning electron microscopy.

    Science.gov (United States)

    Faber, E T; Martinez-Martinez, D; Mansilla, C; Ocelík, V; Hosson, J Th M De

    2015-01-01

    This work presents a new approach to obtain reliable surface topography reconstructions from 2D Scanning Electron Microscopy (SEM) images. In this method a set of images taken at different tilt angles are compared by means of digital image correlation (DIC). It is argued that the strength of the method lies in the fact that precise knowledge about the nature of the rotation (vector and/or magnitude) is not needed. Therefore, the great advantage is that complex calibrations of the measuring equipment are avoided. The paper presents the necessary equations involved in the methods, including derivations and solutions. The method is illustrated with examples of 3D reconstructions followed by a discussion on the relevant experimental parameters. Copyright © 2014 Elsevier B.V. All rights reserved.

  9. An electron tomography algorithm for reconstructing 3D morphology using surface tangents of projected scattering interfaces

    Science.gov (United States)

    Petersen, T. C.; Ringer, S. P.

    2010-03-01

    Upon discerning the mere shape of an imaged object, as portrayed by projected perimeters, the full three-dimensional scattering density may not be of particular interest. In this situation considerable simplifications to the reconstruction problem are possible, allowing calculations based upon geometric principles. Here we describe and provide an algorithm which reconstructs the three-dimensional morphology of specimens from tilt series of images for application to electron tomography. Our algorithm uses a differential approach to infer the intersection of projected tangent lines with surfaces which define boundaries between regions of different scattering densities within and around the perimeters of specimens. Details of the algorithm implementation are given and explained using reconstruction calculations from simulations, which are built into the code. An experimental application of the algorithm to a nano-sized Aluminium tip is also presented to demonstrate practical analysis for a real specimen. Program summaryProgram title: STOMO version 1.0 Catalogue identifier: AEFS_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEFS_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 2988 No. of bytes in distributed program, including test data, etc.: 191 605 Distribution format: tar.gz Programming language: C/C++ Computer: PC Operating system: Windows XP RAM: Depends upon the size of experimental data as input, ranging from 200 Mb to 1.5 Gb Supplementary material: Sample output files, for the test run provided, are available. Classification: 7.4, 14 External routines: Dev-C++ ( http://www.bloodshed.net/devcpp.html) Nature of problem: Electron tomography of specimens for which conventional back projection may fail and/or data for which there is a limited angular

  10. Reconstruction and downscaling of Eastern Mediterranean OSCAR satellite surface current data using DINEOF

    Science.gov (United States)

    Nikolaidis, Andreas; Stylianou, Stavros; Georgiou, Georgios; Hajimitsis, Diofantos; Gravanis, Elias; Akylas, Evangelos

    2015-04-01

    During the last decade, Rixen (2005) and Alvera-Azkarate (2010) presented the DINEOF (Data Interpolating Empirical Orthogonal Functions) method, a EOF-based technique to reconstruct missing data in satellite images. The application of DINEOF method, proved to provide relative success in various experimental trials (Wang and Liu, 2013; Nikolaidis et al., 2013;2014), and tends to be an effective and computationally affordable solution, on the problem of data reconstruction, for missing data from geophysical fields, such as chlorophyll-a, sea surface temperatures or salinity and geophysical fields derived from satellite data. Implementation of this method in a GIS system will provide with a more complete, integrated approach, permitting the expansion of the applicability over various aspects. This may be especially useful in studies where various data of different kind, have to be examined. For this purpose, in this study we have implemented and present a GIS toolbox that aims to automate the usage of the algorithm, incorporating the DINEOF codes provided by GHER (GeoHydrodynamics and Environment Research Group of University of Liege) into the ArcGIS®. ArcGIS® is a well known standard on Geographical Information Systems, used over the years for various remote sensing procedures, in sea and land environment alike. A case-study of filling the missing satellite derived current data in the Eastern Mediterranean Sea area, for a monthly period is analyzed, as an example for the effectiveness and simplicity of the usage of this toolbox. The specific study focuses to OSCAR satellite data (http://www.oscar.noaa.gov/) collected by NOAA/NESDIS Operational Surface Current Processing and Data Center, from the respective products of OSCAR Project Office Earth and Space Research organization, that provides free online access to unfiltered (1/3 degree) resolution. All the 5-day mean products data coverage were successfully reconstructed. KEY WORDS: Remote Sensing, Cyprus

  11. A method of reconstructing complex stratigraphic surfaces with multitype fault constraints

    Science.gov (United States)

    Deng, Shi-Wu; Jia, Yu; Yao, Xing-Miao; Liu, Zhi-Ning

    2017-06-01

    The construction of complex stratigraphic surfaces is widely employed in many fields, such as petroleum exploration, geological modeling, and geological structure analysis. It also serves as an important foundation for data visualization and visual analysis in these fields. The existing surface construction methods have several deficiencies and face various difficulties, such as the presence of multitype faults and roughness of resulting surfaces. In this paper, a surface modeling method that uses geometric partial differential equations (PDEs) is introduced for the construction of stratigraphic surfaces. It effectively solves the problem of surface roughness caused by the irregularity of stratigraphic data distribution. To cope with the presence of multitype complex faults, a two-way projection algorithm between threedimensional space and a two-dimensional plane is proposed. Using this algorithm, a unified method based on geometric PDEs is developed for dealing with multitype faults. Moreover, the corresponding geometric PDE is derived, and an algorithm based on an evolutionary solution is developed. The algorithm proposed for constructing spatial surfaces with real data verifies its computational efficiency and its ability to handle irregular data distribution. In particular, it can reconstruct faulty surfaces, especially those with overthrust faults.

  12. Reconstruction of the Tip-Surface Interaction Potential by Analysis of the Brownian Motion of an Atomic Force Microscope Tip

    NARCIS (Netherlands)

    Willemsen, O.H.; Kuipers, L.; van der Werf, Kees; de Grooth, B.G.; Greve, Jan

    2000-01-01

    The thermal movement of an atomic force microscope (AFM) tip is used to reconstruct the tip-surface interaction potential. If a tip is brought into the vicinity of a surface, its movement is governed by the sum of the harmonic cantilever potential and the tip-surface interaction potential. By

  13. Reconstruction of pseudo three-dimensional dental image from dental panoramic radiograph and tooth surface shape

    International Nuclear Information System (INIS)

    Imura, Masataka; Kuroda, Yoshihiro; Oshiro, Osamu; Kuroda, Tomohiro; Kagiyama, Yoshiyuki; Yagi, Masakazu; Takada, Kenji; Azuma, Hiroko

    2010-01-01

    Three-dimensional volume data set is useful for diagnosis in dental treatments. However, to obtain three-dimensional images of a dental arch in general dental clinics is difficult. In this paper, we propose a method to reconstruct pseudo three-dimensional dental images from a dental panoramic radiograph and a tooth surface shape which can be obtained from three dimensional shape measurement of a dental impression. The proposed method finds an appropriate curved surface on which the dental panoramic radiograph is mapped by comparing a virtual panoramic image made from a tooth surface shape to a real panoramic radiograph. The developed pseudo three-dimensional dental images give clear impression of patient's dental condition. (author)

  14. Cryopreserved Ultra-Thick Human Amniotic Membrane for Conjunctival Surface Reconstruction After Excision of Conjunctival Tumors.

    Science.gov (United States)

    Tanaka, Thais S; Demirci, Hakan

    2016-04-01

    Cryopreserved ultra-thick human amniotic membrane (AM) is used for glaucoma surgery. We evaluated the use of cryopreserved ultra-thick human AM for conjunctival surface reconstruction after excision of a conjunctival tumor. We retrospectively reviewed the medical records of 28 patients who underwent conjunctival surface reconstruction with cryopreserved ultra-thick human AM after excision of the tumor. The AM was secured to the surrounding conjunctiva and underlying sclera with interrupted 8-0 Vicryl sutures. Clinical data regarding demographics, diagnosis, size and location of conjunctival tumors, patient outcome, and complications were gathered. Of 28 patients, 6 (21.4%) had malignant melanoma, 4 (14.3%) had squamous cell carcinoma, 6 (21.4%) had conjunctival intraepithelial neoplasia, 1 (3.6%) had sebaceous carcinoma, 1 (3.6%) had mucoepidermoid carcinoma, 1 (3.6%) had conjunctival intraepithelial dysplasia, 5 (17.9%) had pterygium, 2 (7.1%) had compound nevus, 1 (3.6%) had a large epithelial inclusion cyst, and 1 (3.6%) patient had a granuloma. The mean area of graft size was 156 ± 120 mm2. Postoperatively, the graft was well tolerated with no failure, discomfort, or dehiscence. During the 17-month mean follow-up, symblepharon, which was clinically nonsignificant, developed in 3 (11%) patients and partial stem cell deficiency was noted in 5 (18%) patients. Cryopreserved ultra-thick human AM is a well-tolerated, effective graft material that is easy to handle. It is a viable alternative for conjunctival surface reconstruction after excision of a conjunctival tumor.

  15. Automatic cortical surface reconstruction of high-resolution T1 echo planar imaging data.

    Science.gov (United States)

    Renvall, Ville; Witzel, Thomas; Wald, Lawrence L; Polimeni, Jonathan R

    2016-07-01

    Echo planar imaging (EPI) is the method of choice for the majority of functional magnetic resonance imaging (fMRI), yet EPI is prone to geometric distortions and thus misaligns with conventional anatomical reference data. The poor geometric correspondence between functional and anatomical data can lead to severe misplacements and corruption of detected activation patterns. However, recent advances in imaging technology have provided EPI data with increasing quality and resolution. Here we present a framework for deriving cortical surface reconstructions directly from high-resolution EPI-based reference images that provide anatomical models exactly geometric distortion-matched to the functional data. Anatomical EPI data with 1mm isotropic voxel size were acquired using a fast multiple inversion recovery time EPI sequence (MI-EPI) at 7T, from which quantitative T1 maps were calculated. Using these T1 maps, volumetric data mimicking the tissue contrast of standard anatomical data were synthesized using the Bloch equations, and these T1-weighted data were automatically processed using FreeSurfer. The spatial alignment between T2(⁎)-weighted EPI data and the synthetic T1-weighted anatomical MI-EPI-based images was improved compared to the conventional anatomical reference. In particular, the alignment near the regions vulnerable to distortion due to magnetic susceptibility differences was improved, and sampling of the adjacent tissue classes outside of the cortex was reduced when using cortical surface reconstructions derived directly from the MI-EPI reference. The MI-EPI method therefore produces high-quality anatomical data that can be automatically segmented with standard software, providing cortical surface reconstructions that are geometrically matched to the BOLD fMRI data. Copyright © 2016 Elsevier Inc. All rights reserved.

  16. Molecular dynamics simulation of boron implanted into diamond (0 0 1) 2 x 1 reconstruction surface

    International Nuclear Information System (INIS)

    Li Rongbin; Dai Yongbin; Hu Xiaojun; Sheng Heshen; He Xianchang

    2003-01-01

    Molecular dynamic simulations, utilizing the Tersoff many-body potential, are used to investigate the microscopic processes of a single boron atom with energy of 500 eV implanted into the diamond (0 0 1) 2 x 1 reconstruction surface. The lifetime of thermal spike created by B bombardment is about 0.18 ps by calculating the variation of the mean coordination numbers with time. The formation of the split-interstitial composed of projectile and lattice atom (B-C) is observed. The total potential energy of the system decreases about 0.56 eV with a stable B split-interstitial in diamond. The lattice relaxations in the diamond (0 0 1) 2 x 1 reconstruction surface or near surface of simulated have been discussed. The outermost layer atoms tend to move inward, and the other atoms move outward. The interplanar distance between the outermost layer and the second layer has been shortened by 15% compared with its starting interplanar distance. Stress distribution in the calculated diamond configuration is inhomogeneous. After boron implanted into diamond with the energy of 500 eV, there is an excess of compressively stressed atoms in the lattice, which induces the total stress being compressive

  17. 3D surface reconstruction and FIB microscopy of worn alumina hip prostheses

    Energy Technology Data Exchange (ETDEWEB)

    Zeng, P; Inkson, B J; Rainforth, W M [Department of Engineering Materials, Mappin St., University of Sheffield, Sheffield, S1 3JD (United Kingdom); Stewart, T [School of Mechanical Engineering, University of Leeds, Leeds, LS2 9JT (United Kingdom)], E-mail: m.rainforth@sheffield.ac.uk

    2008-08-15

    Interest in alumina-on-alumina total hip replacements (THR) continues to grow for the young and active patient due to their superior wear performance and biocompatibility compared to the alternative traditional polymer/metal prostheses. While alumina on alumina bearings offer an excellent solution, a region of high wear, known as stripe wear, is commonly observed on retrieved alumina hip components that poses concern. These in-vivo stripe wear mechanisms can be replicated in vitro by the introduction of micro-separation during the simulated walking cycle in hip joint simulation. However, the understanding of the mechanisms behind the stripe wear processes is relatively poor. 3D topographic reconstructions of titled SEM stereo pairs from different zones have been obtained to determine the local worn surface topography. Focused ion beam (FIB) microscopy was applied to examine the subsurface damage across the stripe wear. The paper presents novel images of sub-surface microcracks in alumina along with 3D reconstructions of the worn ceramic surfaces and a classification of four distinct wear zones following microseparation in hip prostheses.

  18. Image Reconstruction and Evaluation: Applications on Micro-Surfaces and Lenna Image Representation

    Directory of Open Access Journals (Sweden)

    Mohammad Mayyas

    2016-09-01

    Full Text Available This article develops algorithms for the characterization and the visualization of micro-scale features using a small number of sample points, with the goal of mitigating the measurement shortcomings, which are often destructive or time consuming. The popular measurement techniques that are used in imaging of micro-surfaces include the 3D stylus or interferometric profilometry and Scanning Electron Microscopy (SEM, where both could represent the micro-surface characteristics in terms of 3D dimensional topology and greyscale image, respectively. Such images could be highly dense; therefore, traditional image processing techniques might be computationally expensive. We implement the algorithms in several case studies to rapidly examine the microscopic features of micro-surface of Microelectromechanical System (MEMS, and then we validate the results using a popular greyscale image; i.e., “Lenna” image. The contributions of this research include: First, development of local and global algorithm based on modified Thin Plate Spline (TPS model to reconstruct high resolution images of the micro-surface’s topography, and its derivatives using low resolution images. Second, development of a bending energy algorithm from our modified TPS model for filtering out image defects. Finally, development of a computationally efficient technique, referred to as Windowing, which combines TPS and Linear Sequential Estimation (LSE methods, to enhance the visualization of images. The Windowing technique allows rapid image reconstruction based on the reduction of inverse problem.

  19. High-speed Fourier transform profilometry for reconstructing objects having arbitrary surface colours

    International Nuclear Information System (INIS)

    Chen, Liang-Chia; Nguyen, Xuan Loc; Zhang, Fu-Hao; Lin, Tzeng-Yow

    2010-01-01

    In this paper, Fourier transform profilometry (FTP) using a colour fringe selection technique for accurate phase map reconstruction is newly proposed to overcome the limitation of FTP in measuring objects having arbitrary surface colours. The sinusoidal colour fringe pattern is encoded to form a unique colour pattern for projecting onto the object's surface, and its reflected deformed fringe image is taken using a triple-colour CCD camera and rapidly processed by the developed FTP method employing a novel band-pass filter. A new 3D vision system is capable of measuring objects with a high speed of up to 60 frames s −1 . To reconstruct the 3D profile of an object having arbitrary surface colours, an innovative strategy is developed to identify the colour channel of the detected fringe pattern with the best modulation transfer function (MTF) for retrieving accurate phase maps. The experimental results demonstrate that the system has the capability to acquire 3D maps at a high speed while the measurement accuracy of the developed method is substantially better than that of the traditional FTP method. By measuring the standard step heights in a repeatability test, it is confirmed that a maximum measured error can be controlled to less than 2.8% of the overall measuring depth range

  20. Critical surface phase of α2(2 × 4) reconstructed zig-zag chains on InAs(001)

    Energy Technology Data Exchange (ETDEWEB)

    Guo, Xiang [Department of Electronic Information Science and Technology, Guizhou University, Guizhou, Guiyang 550025 (China); Zhou, Xun [Department of Electronic Information Science and Technology, Guizhou University, Guizhou, Guiyang 550025 (China); School of Physics and Electronics Science, Guizhou Normal University, Guizhou, Guiyang 550001 (China); Wang, Ji-Hong [Department of Electronic Information Science and Technology, Guizhou University, Guizhou, Guiyang 550025 (China); Luo, Zi-Jiang [Department of Electronic Information Science and Technology, Guizhou University, Guizhou, Guiyang 550025 (China); School of Education Administration, Guizhou University of Finance and Economics, Guizhou, Guiyang 550004 (China); Zhou, Qing; Liu, Ke; Hu, Ming-Zhe [Department of Electronic Information Science and Technology, Guizhou University, Guizhou, Guiyang 550025 (China); Ding, Zhao, E-mail: zding@gzu.edu.cn [Department of Electronic Information Science and Technology, Guizhou University, Guizhou, Guiyang 550025 (China)

    2014-07-01

    The critical condition for InAs(001) surface phase transition has been studied, the surface phase transition of InAs(001) showed discontinuity with hysteresis cycle as a function of substrate temperature. A mixed reconstruction surface and zig-zag chain α2(2 × 4) reconstruction surface have been observed by scanning tunneling microscopy. Considering the interaction and dynamics of surface arsenic atoms, the zig-zag chains of α2(2 × 4) reconstruction were found to be actually caused by the selective adsorption and desorption of surface arsenic dimers, they played a critical role in the surface phase transition between (2 × 4) and (4 × 2). - Highlights: • Discontinuous surface phase transition phenomena on the flat InAs(001) surface • Nanoscale InAs(001) surface observed by scanning tunneling microscopy • “Zig-Zag” chains of α2(2 × 4) reconstruction • Critical role in the surface phase transition between (2 × 4) and (4 × 2)

  1. Critical surface phase of α2(2 × 4) reconstructed zig-zag chains on InAs(001)

    International Nuclear Information System (INIS)

    Guo, Xiang; Zhou, Xun; Wang, Ji-Hong; Luo, Zi-Jiang; Zhou, Qing; Liu, Ke; Hu, Ming-Zhe; Ding, Zhao

    2014-01-01

    The critical condition for InAs(001) surface phase transition has been studied, the surface phase transition of InAs(001) showed discontinuity with hysteresis cycle as a function of substrate temperature. A mixed reconstruction surface and zig-zag chain α2(2 × 4) reconstruction surface have been observed by scanning tunneling microscopy. Considering the interaction and dynamics of surface arsenic atoms, the zig-zag chains of α2(2 × 4) reconstruction were found to be actually caused by the selective adsorption and desorption of surface arsenic dimers, they played a critical role in the surface phase transition between (2 × 4) and (4 × 2). - Highlights: • Discontinuous surface phase transition phenomena on the flat InAs(001) surface • Nanoscale InAs(001) surface observed by scanning tunneling microscopy • “Zig-Zag” chains of α2(2 × 4) reconstruction • Critical role in the surface phase transition between (2 × 4) and (4 × 2)

  2. Image simulation and surface reconstruction of undercut features in atomic force microscopy

    Science.gov (United States)

    Qian, Xiaoping; Villarrubia, John; Tian, Fenglei; Dixson, Ronald

    2007-03-01

    CD-AFMs (critical dimension atomic force microscopes) are instruments with servo-control of the tip in more than one direction. With appropriately "boot-shaped" or flared tips, such instruments can image vertical or even undercut features. As with any AFM, the image is a dilation of the sample shape with the tip shape. Accurate extraction of the CD requires a correction for the tip effect. Analytical methods to correct images for the tip shape have been available for some time for the traditional (vertical feedback only) AFMs, but were until recently unavailable for instruments with multi-dimensional feedback. Dahlen et al. [J. Vac. Sci. Technol. B23, pp. 2297-2303, (2005)] recently introduced a swept-volume approach, implemented for 2-dimensional (2D) feedback. It permits image simulation and sample reconstruction, techniques previously developed for the traditional instruments, to be extended for the newer tools. We have introduced [X. Qian and J. S. Villarrubia, Ultramicroscopy, in press] an alternative dexel-based method, that does the same in either 2D or 3D. This paper describes the application of this method to sample shapes of interest in semiconductor manufacturing. When the tip shape is known (e.g., by prior measurement using a tip characterizer) a 3D sample surface may be reconstructed from its 3D image. Basing the CD measurement upon such a reconstruction is shown here to remove some measurement artifacts that are not removed (or are incompletely removed) by the existing measurement procedures.

  3. Reconstructing Sea Surface Conditions in the Bay of Bengal during the Mid-Pleistocene Transition

    Science.gov (United States)

    Lagos, A. D.; Dekens, P.; Reilly, B. T.; Selkin, P. A.; Meynadier, L.; Savian, J. F.

    2017-12-01

    During the Mid-Pleistocene Transition (MPT, 0.8-1.2Ma) Earth's glacial cycles transitioned from responding primarily to 41kyr obliquity cycles to responding to 100kyr eccentricity cycles. In the tropics, sea surface temperature (SST) in the eastern tropical Pacific cooled through the MPT, suggesting a strengthening of the equatorial Pacific zonal temperature gradient (Medina-Elizalde & Lea, 2005). The strong SST gradient would have intensified Walker Cell convection during the MPT and built up latent heat in the western Pacific, which could cause cold SST anomalies in the northern Indian Ocean (Liu et al., 2015). Due to a scarcity of records, it is unclear how climate and oceanic conditions evolved in the Indian Ocean during the MPT. A set of recent IODP expeditions, including 353 and 354, cored sediment from the Bay of Bengal. Several sites recovered by expedition 353 will be ideal for reconstructing monsoon intensity through time, while the expedition 354 cores from a longitudinal transect at 8°N are in a region not directly impacted by changes in freshwater input due to direct precipitation or run off. The sites are influenced by the northeastern migration of equatorial Indian Ocean water via the Southwest Monsoon Current, which supplies significant moisture to the monsoon. Expedition 354's southern Bay of Bengal sites are well situated for better understanding the link between the tropical Indian Ocean and the northern Bay of Bengal. We reconstructed sea surface conditions at IODP site 1452 (8°N, 87°E, 3670m water depth) in the distal Bengal Fan. A 3 meter long section of the core has been identified as the MPT using the Bruhnes/Matuyama, Jaramillo, and Cobb Mountain paleomagnetic reversals (France-Lanord et al., 2016). This section of site 1452 was sampled every 2cm ( 2kyr resolution). Approximately 30 G. sacculifer, a surface dwelling planktonic foraminifera, were picked from the 355-425μm size fraction. We measured Mg/Ca and δ18O on splits of the same

  4. Iterative algorithm for reconstructing rotationally asymmetric surface deviation with pixel-level spatial resolution

    Science.gov (United States)

    Quan, Haiyang; Wu, Fan; Hou, Xi

    2015-10-01

    New method for reconstructing rotationally asymmetric surface deviation with pixel-level spatial resolution is proposed. It is based on basic iterative scheme and accelerates the Gauss-Seidel method by introducing an acceleration parameter. This modified Successive Over-relaxation (SOR) is effective for solving the rotationally asymmetric components with pixel-level spatial resolution, without the usage of a fitting procedure. Compared to the Jacobi and Gauss-Seidel method, the modified SOR method with an optimal relaxation factor converges much faster and saves more computational costs and memory space without reducing accuracy. It has been proved by real experimental results.

  5. Mapping the Diffusion Potential of a Reconstructed Au(111) Surface at Nanometer Scale with 2D Molecular Gas

    International Nuclear Information System (INIS)

    Yan Shi-Chao; Xie Nan; Gong Hui-Qi; Guo Yang; Shan Xin-Yan; Lu Xing-Hua; Sun Qian

    2012-01-01

    The adsorption and diffusion behaviors of benzene molecules on an Au(111) surface are investigated by low-temperature scanning tunneling microscopy. A herringbone surface reconstruction of the Au(111) surface is imaged with atomic resolution, and significantly different behaviors are observed for benzene molecules adsorbed on step edges and terraces. The electric field induced modification in the molecular diffusion potential is revealed with a 2D molecular gas model, and a new method is developed to map the diffusion potential over the reconstructed Au(111) surface at the nanometer scale. (condensed matter: structure, mechanical and thermal properties)

  6. Advantages of cortical surface reconstruction using submillimeter 7 T MEMPRAGE.

    Science.gov (United States)

    Zaretskaya, Natalia; Fischl, Bruce; Reuter, Martin; Renvall, Ville; Polimeni, Jonathan R

    2018-01-15

    Recent advances in MR technology have enabled increased spatial resolution for routine functional and anatomical imaging, which has created demand for software tools that are able to process these data. The availability of high-resolution data also raises the question of whether higher resolution leads to substantial gains in accuracy of quantitative morphometric neuroimaging procedures, in particular the cortical surface reconstruction and cortical thickness estimation. In this study we adapted the FreeSurfer cortical surface reconstruction pipeline to process structural data at native submillimeter resolution. We then quantified the differences in surface placement between meshes generated from (0.75 mm) 3 isotropic resolution data acquired in 39 volunteers and the same data downsampled to the conventional 1 mm 3 voxel size. We find that when processed at native resolution, cortex is estimated to be thinner in most areas, but thicker around the Cingulate and the Calcarine sulci as well as in the posterior bank of the Central sulcus. Thickness differences are driven by two kinds of effects. First, the gray-white surface is found closer to the white matter, especially in cortical areas with high myelin content, and thus low contrast, such as the Calcarine and the Central sulci, causing local increases in thickness estimates. Second, the gray-CSF surface is placed more interiorly, especially in the deep sulci, contributing to local decreases in thickness estimates. We suggest that both effects are due to reduced partial volume effects at higher spatial resolution. Submillimeter voxel sizes can therefore provide improved accuracy for measuring cortical thickness. Copyright © 2017 Elsevier Inc. All rights reserved.

  7. Reconstructing extreme AMOC events through nudging of the ocean surface: a perfect model approach

    Science.gov (United States)

    Ortega, Pablo; Guilyardi, Eric; Swingedouw, Didier; Mignot, Juliette; Nguyen, Sébastien

    2017-11-01

    While the Atlantic Meridional Overturning Circulation (AMOC) is thought to be a crucial component of the North Atlantic climate, past changes in its strength are challenging to quantify, and only limited information is available. In this study, we use a perfect model approach with the IPSL-CM5A-LR model to assess the performance of several surface nudging techniques in reconstructing the variability of the AMOC. Special attention is given to the reproducibility of an extreme positive AMOC peak from a preindustrial control simulation. Nudging includes standard relaxation techniques towards the sea surface temperature and salinity anomalies of this target control simulation, and/or the prescription of the wind-stress fields. Surface nudging approaches using standard fixed restoring terms succeed in reproducing most of the target AMOC variability, including the timing of the extreme event, but systematically underestimate its amplitude. A detailed analysis of the AMOC variability mechanisms reveals that the underestimation of the extreme AMOC maximum comes from a deficit in the formation of the dense water masses in the main convection region, located south of Iceland in the model. This issue is largely corrected after introducing a novel surface nudging approach, which uses a varying restoring coefficient that is proportional to the simulated mixed layer depth, which, in essence, keeps the restoring time scale constant. This new technique substantially improves water mass transformation in the regions of convection, and in particular, the formation of the densest waters, which are key for the representation of the AMOC extreme. It is therefore a promising strategy that may help to better constrain the AMOC variability and other ocean features in the models. As this restoring technique only uses surface data, for which better and longer observations are available, it opens up opportunities for improved reconstructions of the AMOC over the last few decades.

  8. Characterizing Spatial Organization of Cell Surface Receptors in Human Breast Cancer with STORM

    Science.gov (United States)

    Lyall, Evan; Chapman, Matthew R.; Sohn, Lydia L.

    2012-02-01

    Regulation and control of complex biological functions are dependent upon spatial organization of biological structures at many different length scales. For instance Eph receptors and their ephrin ligands bind when opposing cells come into contact during development, resulting in spatial organizational changes on the nanometer scale that lead to changes on the macro scale, in a process known as organ morphogenesis. One technique able to probe this important spatial organization at both the nanometer and micrometer length scales, including at cell-cell junctions, is stochastic optical reconstruction microscopy (STORM). STORM is a technique that localizes individual fluorophores based on the centroids of their point spread functions and then reconstructs a composite image to produce super resolved structure. We have applied STORM to study spatial organization of the cell surface of human breast cancer cells, specifically the organization of tyrosine kinase receptors and chemokine receptors. A better characterization of spatial organization of breast cancer cell surface proteins is necessary to fully understand the tumorigenisis pathways in the most common malignancy in United States women.

  9. High-Speed Surface Reconstruction of Flying Birds Using Structured Light

    Science.gov (United States)

    Deetjen, Marc; Lentink, David

    2017-11-01

    Birds fly effectively through complex environments, and in order to understand the strategies that enable them to do so, we need to determine the shape and movement of their wings. Previous studies show that even small perturbations in wing shape have dramatic aerodynamic effects, but these shape changes have not been quantified automatically at high temporal and spatial resolutions. Hence, we developed a custom 3D surface mapping method which uses a high-speed camera to view a grid of stripes projected onto a flying bird. Because the light is binary rather than grayscale, and each frame is separately analyzed, this method can function at any frame rate with sufficient light. The method is automated, non-invasive, and able to measure a volume by simultaneously reconstructing from multiple views. We use this technique to reconstruct the 3D shape of the surface of a parrotlet during flapping flight at 3200 fps. We then analyze key dynamic parameters such as wing twist and angle of attack, and compute aerodynamic parameters such as lift and drag. While this novel system is designed to quantify bird wing shape and motion, it is adaptable for tracking other objects such as quickly deforming fish, especially those which are difficult to reconstruct using other 3D tracking methods. The presenter needs to leave by 3 pm on the final day of the conference (11/21) in order to make his flight. Please account for this in the scheduling if possible by scheduling the presentation earlier in the day or a different day.

  10. Accurate 3D reconstruction of bony surfaces using ultrasonic synthetic aperture techniques for robotic knee arthroplasty.

    Science.gov (United States)

    Kerr, William; Rowe, Philip; Pierce, Stephen Gareth

    2017-06-01

    Robotically guided knee arthroplasty systems generally require an individualized, preoperative 3D model of the knee joint. This is typically measured using Computed Tomography (CT) which provides the required accuracy for preoperative surgical intervention planning. Ultrasound imaging presents an attractive alternative to CT, allowing for reductions in cost and the elimination of doses of ionizing radiation, whilst maintaining the accuracy of the 3D model reconstruction of the joint. Traditional phased array ultrasound imaging methods, however, are susceptible to poor resolution and signal to noise ratios (SNR). Alleviating these weaknesses by offering superior focusing power, synthetic aperture methods have been investigated extensively within ultrasonic non-destructive testing. Despite this, they have yet to be fully exploited in medical imaging. In this paper, the ability of a robotic deployed ultrasound imaging system based on synthetic aperture methods to accurately reconstruct bony surfaces is investigated. Employing the Total Focussing Method (TFM) and the Synthetic Aperture Focussing Technique (SAFT), two samples were imaged which were representative of the bones of the knee joint: a human-shaped, composite distal femur and a bovine distal femur. Data were captured using a 5MHz, 128 element 1D phased array, which was manipulated around the samples using a robotic positioning system. Three dimensional surface reconstructions were then produced and compared with reference models measured using a precision laser scanner. Mean errors of 0.82mm and 0.88mm were obtained for the composite and bovine samples, respectively, thus demonstrating the feasibility of the approach to deliver the sub-millimetre accuracy required for the application. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

  11. Imaging and reconstruction of cell cortex structures near the cell surface

    Science.gov (United States)

    Jin, Luhong; Zhou, Xiaoxu; Xiu, Peng; Luo, Wei; Huang, Yujia; Yu, Feng; Kuang, Cuifang; Sun, Yonghong; Liu, Xu; Xu, Yingke

    2017-11-01

    Total internal reflection fluorescence microscopy (TIRFM) provides high optical sectioning capability and superb signal-to-noise ratio for imaging of cell cortex structures. The development of multi-angle (MA)-TIRFM permits high axial resolution imaging and reconstruction of cellular structures near the cell surface. Cytoskeleton is composed of a network of filaments, which are important for maintenance of cell function. The high-resolution imaging and quantitative analysis of filament organization would contribute to our understanding of cytoskeleton regulation in cell. Here, we used a custom-developed MA-TIRFM setup, together with stochastic photobleaching and single molecule localization method, to enhance the lateral resolution of TIRFM imaging to about 100 nm. In addition, we proposed novel methods to perform filament segmentation and 3D reconstruction from MA-TIRFM images. Furthermore, we applied these methods to study the 3D localization of cortical actin and microtubule structures in U373 cancer cells. Our results showed that cortical actins localize ∼ 27 nm closer to the plasma membrane when compared with microtubules. We found that treatment of cells with chemotherapy drugs nocodazole and cytochalasin B disassembles cytoskeletal network and induces the reorganization of filaments towards the cell periphery. In summary, this study provides feasible approaches for 3D imaging and analyzing cell surface distribution of cytoskeletal network. Our established microscopy platform and image analysis toolkits would facilitate the study of cytoskeletal network in cells.

  12. Excess Li-Ion Storage on Reconstructed Surfaces of Nanocrystals To Boost Battery Performance

    Energy Technology Data Exchange (ETDEWEB)

    Duan, Yandong; Zhang, Bingkai; Zheng, Jiaxin; Hu, Jiangtao; Wen, Jianguo; Miller, Dean; Yan, Pengfei; Liu, Tongchao; Guo, Hua; Li, Wen; Song, Xiaohe; Zhou, Zengquing; Liu, Chaokun; Tang, Hanting; Tan, Rui; Chen, Zonghai; Ren, Yang; Lin, Yuan; Yang, Wanli; Wang, Chongmin; Wang, Lin-Wang; Lu, Jun; Amine, Khalil; Pan, Feng

    2017-08-03

    Abstract. Due to the enhanced kinetic properties, nanocrystallites have received much attention as potential electrode materials for energy storage. However, because of the large specific surface areas of nanocrystallites, they usually suffer from decreased energy density, reduced cycling stability and total electrode capacity. In this work, we report a size-dependent excess capacity beyond the theoretical value of 170 mAhg-1 in a special carbon coated LiFePO4 composite cathode material, which delivers capacities of 191.2 and 213.5 mAhg-1 with the mean particle sizes of 83 nm and 42 nm, respectively. Moreover, this LiFePO4 composite also shows excellent cycling stability and high rate performance. Our further experimental tests and ab initio calculations reveal that the excess capacity comes from the charge passivation for which the C-O-Fe bonds would lead to charge redistribution on the surface of LiFePO4 and hence to enhance the bonding interaction between surface O atoms and Li-ions. The surface reconstruction for excess Li-ion storage makes full use of the large specific surface area for the nanocrystallites, which can maintain the fast Li-ion transport and enhance the capacity greatly that the nanocrystallites usually suffers.

  13. 'The surface management system' (SuMS) database: a surface-based database to aid cortical surface reconstruction, visualization and analysis

    Science.gov (United States)

    Dickson, J.; Drury, H.; Van Essen, D. C.

    2001-01-01

    Surface reconstructions of the cerebral cortex are increasingly widely used in the analysis and visualization of cortical structure, function and connectivity. From a neuroinformatics perspective, dealing with surface-related data poses a number of challenges. These include the multiplicity of configurations in which surfaces are routinely viewed (e.g. inflated maps, spheres and flat maps), plus the diversity of experimental data that can be represented on any given surface. To address these challenges, we have developed a surface management system (SuMS) that allows automated storage and retrieval of complex surface-related datasets. SuMS provides a systematic framework for the classification, storage and retrieval of many types of surface-related data and associated volume data. Within this classification framework, it serves as a version-control system capable of handling large numbers of surface and volume datasets. With built-in database management system support, SuMS provides rapid search and retrieval capabilities across all the datasets, while also incorporating multiple security levels to regulate access. SuMS is implemented in Java and can be accessed via a Web interface (WebSuMS) or using downloaded client software. Thus, SuMS is well positioned to act as a multiplatform, multi-user 'surface request broker' for the neuroscience community.

  14. Observer success rates for identification of 3D surface reconstructed facial images and implications for patient privacy and security

    Science.gov (United States)

    Chen, Joseph J.; Siddiqui, Khan M.; Fort, Leslie; Moffitt, Ryan; Juluru, Krishna; Kim, Woojin; Safdar, Nabile; Siegel, Eliot L.

    2007-03-01

    3D and multi-planar reconstruction of CT images have become indispensable in the routine practice of diagnostic imaging. These tools cannot only enhance our ability to diagnose diseases, but can also assist in therapeutic planning as well. The technology utilized to create these can also render surface reconstructions, which may have the undesired potential of providing sufficient detail to allow recognition of facial features and consequently patient identity, leading to violation of patient privacy rights as described in the HIPAA (Health Insurance Portability and Accountability Act) legislation. The purpose of this study is to evaluate whether 3D reconstructed images of a patient's facial features can indeed be used to reliably or confidently identify that specific patient. Surface reconstructed images of the study participants were created used as candidates for matching with digital photographs of participants. Data analysis was performed to determine the ability of observers to successfully match 3D surface reconstructed images of the face with facial photographs. The amount of time required to perform the match was recorded as well. We also plan to investigate the ability of digital masks or physical drapes to conceal patient identity. The recently expressed concerns over the inability to truly "anonymize" CT (and MRI) studies of the head/face/brain are yet to be tested in a prospective study. We believe that it is important to establish whether these reconstructed images are a "threat" to patient privacy/security and if so, whether minimal interventions from a clinical perspective can substantially reduce this possibility.

  15. Low Overpotential and High Current CO2 Reduction with Surface Reconstructed Cu Foam Electrodess

    KAUST Repository

    Min, Shixiong

    2016-06-23

    While recent reports have demonstrated that oxide-derived Cu-based electrodes exhibit high selectivity for CO2 reduction at low overpotential, the low catalytic current density (<2 mA/cm2 at -0.45 V vs. RHE) still largely limits its applications for large-scale fuel synthesis. Here we report an extremely high current density for CO2 reduction at low overpotential using a Cu foam electrode prepared by air-oxidation and subsequent electroreduction. Apart from possessing three-dimensional (3D) open frameworks, the resulting Cu foam electrodes prepared at higher temperatures exhibit enhanced electrochemically active surface area and distinct surface structures. In particular, the Cu foam electrode prepared at 500 °C exhibits an extremely high geometric current density of ~9.4 mA/cm2 in CO2-satrurated 0.1 M KHCO3 aqueous solution and achieving ~39% CO and ~23% HCOOH Faradaic efficiencies at -0.45 V vs. RHE. The high activity and significant selectivity enhancement are attributable to the formation of abundant grain-boundary supported active sites and preferable (100) and (111) facets as a result of reconstruction of Cu surface facets. This work demonstrates that the structural integration of Cu foam with open 3D frameworks and the favorable surface structures is a promising strategy to develop an advanced Cu electrocatalyst that can operate at high current density and low overpotential for CO2 reduction.

  16. The Effect of Laser Surface Reconstruction of Disordered Carbons on Performance

    International Nuclear Information System (INIS)

    EVEN JR., WILLIAM R.; GUIDOTTI, RONALD A.

    1999-01-01

    The reconstruction of the surface of disordered carbons was examined by heating carbons derived from polymethacrylonitrile (PMAN) and divinylbenzene (DVB) with a pulsed infrared laser in an argon or helium atmosphere, both fluidized and under static conditions. By graphitizing the outer surface of the carbons, it was hoped to reduce the high first-cycle losses associated with such disordered materials in Li-ion cells. The power to the sample was varied to observed the effects on surface morphology and electrochemical performance in 1M LiPF(sub 6) ethylene carbonate-dimethyl carbonate. The use various reactive atmosphere such as ethylene, 2-vinylpyridine, pyrrole, and furfuryl alcohol were also evaluated as an alternative means of hopefully forming a thin graphitic layer on the carbon particles to reduce first-cycle irreversibility. While some improvement was realized, these losses were still unacceptably high. The laser heating did improve the rate capabilities of the carbons, however. More work in this area is necessary to fully understand surface and bulk effects

  17. Adsorption/desorption kinetics of Na atoms on reconstructed Si (111)-7 x 7 surface

    International Nuclear Information System (INIS)

    Chauhan, Amit Kumar Singh; Govind; Shivaprasad, S.M.

    2010-01-01

    Self-assembled nanostructures on a periodic template are fundamentally and technologically important as they put forward the possibility to fabricate and pattern micro/nano-electronics for sensors, ultra high-density memories and nanocatalysts. Alkali-metal (AM) nanostructure grown on a semiconductor surface has received considerable attention because of their simple hydrogen like electronic structure. However, little efforts have been made to understand the fundamental aspects of the growth mechanism of self-assembled nanostructures of AM on semiconductor surfaces. In this paper, we report organized investigation of kinetically controlled room-temperature (RT) adsorption/desorption of sodium (Na) metal atoms on clean reconstructed Si (111)-7 x 7 surface, by X-ray photoelectron spectroscopy (XPS). The RT uptake curve shows a layer-by-layer growth (Frank-vander Merve growth) mode of Na on Si (111)-7 x 7 surfaces and a shift is observed in the binding energy position of Na (1s) spectra. The thermal stability of the Na/Si (111) system was inspected by annealing the system to higher substrate temperatures. Within a temperature range from RT to 350 o C, the temperature induced mobility to the excess Na atoms sitting on top of the bilayer, allowing to arrange themselves. Na atoms desorbed over a wide temperature range of 370 o C, before depleting the Si (111) surface at temperature 720 o C. The acquired valence-band (VB) spectra during Na growth revealed the development of new electronic-states near the Fermi level and desorption leads the termination of these. For Na adsorption up to 2 monolayers, decrease in work function (-1.35 eV) was observed, whereas work function of the system monotonically increases with Na desorption from the Si surface as observed by other studies also. This kinetic and thermodynamic study of Na adsorbed Si (111)-7 x 7 system can be utilized in fabrication of sensors used in night vision devices.

  18. A Note on the Inverse Reconstruction of Residual Fields in Surface Peened Plates

    Directory of Open Access Journals (Sweden)

    S. Ali Faghidian

    Full Text Available Abstract A modified stress function approach is developed here to reconstruct induced stress, residual stress and eigenstrain fields from limited experimental measurements. The present approach is successfully applied to three experimental measurements set in surface peened plates with shallow shot peening affected zone. The well-rehearsed advantage of the proposed approach is that it not only minimizes the deviation of measurements from its approximations but also will result in an inverse solution satisfying a full range of continuum mechanics requirements. Also, the effect of component thickness as a geometric parameter influencing the residual stress state is comprehensively studied. A key finding of present study is that the plate thickness has no influence on the maximum magnitude of eigenstrain profile and compressive residual stresses within the shot peening affected zone while having a great influence on the magnitude of tensile residual stress and the gradient of linear residual stresses present in deeper regions.

  19. Pico Lantern: Surface reconstruction and augmented reality in laparoscopic surgery using a pick-up laser projector.

    Science.gov (United States)

    Edgcumbe, Philip; Pratt, Philip; Yang, Guang-Zhong; Nguan, Christopher; Rohling, Robert

    2015-10-01

    The Pico Lantern is a miniature projector developed for structured light surface reconstruction, augmented reality and guidance in laparoscopic surgery. During surgery it will be dropped into the patient and picked up by a laparoscopic tool. While inside the patient it projects a known coded pattern and images onto the surface of the tissue. The Pico Lantern is visually tracked in the laparoscope's field of view for the purpose of stereo triangulation between it and the laparoscope. In this paper, the first application is surface reconstruction. Using a stereo laparoscope and an untracked Pico Lantern, the absolute error for surface reconstruction for a plane, cylinder and ex vivo kidney, is 2.0 mm, 3.0 mm and 5.6 mm, respectively. Using a mono laparoscope and a tracked Pico Lantern for the same plane, cylinder and kidney the absolute error is 1.4 mm, 1.5 mm and 1.5 mm, respectively. These results confirm the benefit of the wider baseline produced by tracking the Pico Lantern. Virtual viewpoint images are generated from the kidney surface data and an in vivo proof-of-concept porcine trial is reported. Surface reconstruction of the neck of a volunteer shows that the pulsatile motion of the tissue overlying a major blood vessel can be detected and displayed in vivo. Future work will integrate the Pico Lantern into standard and robot-assisted laparoscopic surgery. Copyright © 2015 Elsevier B.V. All rights reserved.

  20. Extended Reconstructed Sea Surface Temperature Version 5 (ERSSTv5): Upgrades, Validations, and Intercomparisons

    Science.gov (United States)

    Huang, B.; Thorne, P.; Banzon, P. V. F.; Chepurin, G. A.; Lawrimore, J. H.; Menne, M. J.; Vose, R. S.; Smith, T. M.; Zhang, H. M.

    2017-12-01

    The monthly global 2°×2° Extended Reconstructed Sea Surface Temperature (ERSST) has been revised and updated from version 4 to version 5. This update incorporates a new release of ICOADS R3.0, a decade of near-surface data from Argo floats, and a new estimate of centennial sea-ice from HadISST2. A number of choices in aspects of quality control, bias adjustment and interpolation have been substantively revised. The resulting ERSST estimates have more realistic spatio-temporal variations, better representation of high latitude SSTs, and ship SST biases are now calculated relative to more accurate buoy measurements, while the global long-term trend remains about the same. Progressive experiments have been undertaken to highlight the effects of each change in data source and analysis technique upon the final product. The reconstructed SST is systematically decreased by 0.077°C, as the reference data source is switched from ship SST in v4 to modern buoy SST in v5. Furthermore, high latitude SSTs are decreased by 0.1°-0.2°C by using sea-ice concentration from HadISST2 over HadISST1. Changes arising from remaining innovations are mostly important at small space and time scales, primarily having an impact where and when input observations are sparse. Cross-validations and verifications with independent modern observations show that the updates incorporated in ERSSTv5 have improved the representation of spatial variability over the global oceans, the magnitude of El Niño and La Niña events, and the decadal nature of SST changes over 1930s-40s when observation instruments changed rapidly. Both long (1900-2015) and short (2000-2015) term SST trends in ERSSTv5 remain significant as in ERSSTv4.

  1. Learning-based 3D surface optimization from medical image reconstruction

    Science.gov (United States)

    Wei, Mingqiang; Wang, Jun; Guo, Xianglin; Wu, Huisi; Xie, Haoran; Wang, Fu Lee; Qin, Jing

    2018-04-01

    Mesh optimization has been studied from the graphical point of view: It often focuses on 3D surfaces obtained by optical and laser scanners. This is despite the fact that isosurfaced meshes of medical image reconstruction suffer from both staircases and noise: Isotropic filters lead to shape distortion, while anisotropic ones maintain pseudo-features. We present a data-driven method for automatically removing these medical artifacts while not introducing additional ones. We consider mesh optimization as a combination of vertex filtering and facet filtering in two stages: Offline training and runtime optimization. In specific, we first detect staircases based on the scanning direction of CT/MRI scanners, and design a staircase-sensitive Laplacian filter (vertex-based) to remove them; and then design a unilateral filtered facet normal descriptor (uFND) for measuring the geometry features around each facet of a given mesh, and learn the regression functions from a set of medical meshes and their high-resolution reference counterparts for mapping the uFNDs to the facet normals of the reference meshes (facet-based). At runtime, we first perform staircase-sensitive Laplacian filter on an input MC (Marching Cubes) mesh, and then filter the mesh facet normal field using the learned regression functions, and finally deform it to match the new normal field for obtaining a compact approximation of the high-resolution reference model. Tests show that our algorithm achieves higher quality results than previous approaches regarding surface smoothness and surface accuracy.

  2. Atlas-free surface reconstruction of the cortical grey-white interface in infants.

    Directory of Open Access Journals (Sweden)

    François Leroy

    Full Text Available BACKGROUND: The segmentation of the cortical interface between grey and white matter in magnetic resonance images (MRI is highly challenging during the first post-natal year. First, the heterogeneous brain maturation creates important intensity fluctuations across regions. Second, the cortical ribbon is highly folded creating complex shapes. Finally, the low tissue contrast and partial volume effects hamper cortex edge detection in parts of the brain. METHODS AND FINDINGS: We present an atlas-free method for segmenting the grey-white matter interface of infant brains in T2-weighted (T2w images. We used a broad characterization of tissue using features based not only on local contrast but also on geometric properties. Furthermore, inaccuracies in localization were reduced by the convergence of two evolving surfaces located on each side of the inner cortical surface. Our method has been applied to eleven brains of one- to four-month-old infants. Both quantitative validations against manual segmentations and sulcal landmarks demonstrated good performance for infants younger than two months old. Inaccuracies in surface reconstruction increased with age in specific brain regions where the tissue contrast decreased with maturation, such as in the central region. CONCLUSIONS: We presented a new segmentation method which achieved good to very good performance at the grey-white matter interface depending on the infant age. This method should reduce manual intervention and could be applied to pathological brains since it does not require any brain atlas.

  3. TH-AB-202-08: A Robust Real-Time Surface Reconstruction Method On Point Clouds Captured From a 3D Surface Photogrammetry System

    International Nuclear Information System (INIS)

    Liu, W; Sawant, A; Ruan, D

    2016-01-01

    Purpose: Surface photogrammetry (e.g. VisionRT, C-Rad) provides a noninvasive way to obtain high-frequency measurement for patient motion monitoring in radiotherapy. This work aims to develop a real-time surface reconstruction method on the acquired point clouds, whose acquisitions are subject to noise and missing measurements. In contrast to existing surface reconstruction methods that are usually computationally expensive, the proposed method reconstructs continuous surfaces with comparable accuracy in real-time. Methods: The key idea in our method is to solve and propagate a sparse linear relationship from the point cloud (measurement) manifold to the surface (reconstruction) manifold, taking advantage of the similarity in local geometric topology in both manifolds. With consistent point cloud acquisition, we propose a sparse regression (SR) model to directly approximate the target point cloud as a sparse linear combination from the training set, building the point correspondences by the iterative closest point (ICP) method. To accommodate changing noise levels and/or presence of inconsistent occlusions, we further propose a modified sparse regression (MSR) model to account for the large and sparse error built by ICP, with a Laplacian prior. We evaluated our method on both clinical acquired point clouds under consistent conditions and simulated point clouds with inconsistent occlusions. The reconstruction accuracy was evaluated w.r.t. root-mean-squared-error, by comparing the reconstructed surfaces against those from the variational reconstruction method. Results: On clinical point clouds, both the SR and MSR models achieved sub-millimeter accuracy, with mean reconstruction time reduced from 82.23 seconds to 0.52 seconds and 0.94 seconds, respectively. On simulated point cloud with inconsistent occlusions, the MSR model has demonstrated its advantage in achieving consistent performance despite the introduced occlusions. Conclusion: We have developed a real

  4. [A Method to Reconstruct Surface Reflectance Spectrum from Multispectral Image Based on Canopy Radiation Transfer Model].

    Science.gov (United States)

    Zhao, Yong-guang; Ma, Ling-ling; Li, Chuan-rong; Zhu, Xiao-hua; Tang, Ling-li

    2015-07-01

    Due to the lack of enough spectral bands for multi-spectral sensor, it is difficult to reconstruct surface retlectance spectrum from finite spectral information acquired by multi-spectral instrument. Here, taking into full account of the heterogeneity of pixel from remote sensing image, a method is proposed to simulate hyperspectral data from multispectral data based on canopy radiation transfer model. This method first assumes the mixed pixels contain two types of land cover, i.e., vegetation and soil. The sensitive parameters of Soil-Leaf-Canopy (SLC) model and a soil ratio factor were retrieved from multi-spectral data based on Look-Up Table (LUT) technology. Then, by combined with a soil ratio factor, all the parameters were input into the SLC model to simulate the surface reflectance spectrum from 400 to 2 400 nm. Taking Landsat Enhanced Thematic Mapper Plus (ETM+) image as reference image, the surface reflectance spectrum was simulated. The simulated reflectance spectrum revealed different feature information of different surface types. To test the performance of this method, the simulated reflectance spectrum was convolved with the Landsat ETM + spectral response curves and Moderate Resolution Imaging Spectrometer (MODIS) spectral response curves to obtain the simulated Landsat ETM+ and MODIS image. Finally, the simulated Landsat ETM+ and MODIS images were compared with the observed Landsat ETM+ and MODIS images. The results generally showed high correction coefficients (Landsat: 0.90-0.99, MODIS: 0.74-0.85) between most simulated bands and observed bands and indicated that the simulated reflectance spectrum was well simulated and reliable.

  5. The 3D geological model of the 1963 Vajont rockslide, reconstructed with implicit surface methods

    Science.gov (United States)

    Bistacchi, Andrea; Massironi, Matteo; Francese, Roberto; Giorgi, Massimo; Taller, Claudio

    2015-04-01

    The Vajont rockslide has been the object of several studies because of its catastrophic consequences and of its particular evolution. Several qualitative or quantitative models have been presented in the last 50 years, but a complete explanation of all the relevant geological and mechanical processes remains elusive. In order to better understand the mechanics and dynamics of the 1963 event, we have reconstructed the first 3D geological model of the rockslide, which allowed us to accurately investigate the rockslide structure and kinematics. The input data for the model consisted in: pre- and post-rockslide geological maps, pre- and post-rockslide orthophotos, pre- and post-rockslide digital elevation models, structural data, boreholes, and geophysical data (2D and 3D seismics and resistivity). All these data have been integrated in a 3D geological model implemented in Gocad®, using the implicit surface modelling method. Results of the 3D geological model include the depth and geometry of the sliding surface, the volume of the two lobes of the rockslide accumulation, kinematics of the rockslide in terms of the vector field of finite displacement, and high quality meshes useful for mechanical and hydrogeological simulations. The latter can include information about the stratigraphy and internal structure of the rock masses and allow tracing the displacement of different material points in the rockslide from the pre-1963-failure to the post-rockslide state. As a general geological conclusion, we may say that the 3D model allowed us to recognize very effectively a sliding surface, whose non-planar geometry is affected by the interference pattern of two regional-scale fold systems. The rockslide is partitioned into two distinct and internally continuous rock masses with a distinct kinematics, which were characterised by a very limited internal deformation during the slide. The continuity of these two large blocks points to a very localized deformation, occurring along

  6. Vibrational properties of the Au-(√{3 }×√{3 } )/Si(111) surface reconstruction

    Science.gov (United States)

    Halbig, B.; Liebhaber, M.; Bass, U.; Geurts, J.; Speiser, E.; Räthel, J.; Chandola, S.; Esser, N.; Krenz, M.; Neufeld, S.; Schmidt, W. G.; Sanna, S.

    2018-01-01

    The vibrational properties of the Au-induced (√{3 }×√{3 })R 30∘ reconstruction of the Si(111) surface are investigated by polarized surface Raman spectroscopy and density-functional theory. The Raman measurements are performed in situ at room temperature as well as 20 K, and they reveal the presence of vibrational eigenmodes in the spectral range from 20 to 450 cm-1. In particular, two peaks of E symmetry at 75 and 183 cm-1 dominate the spectra. No substantial difference between room- and low-temperature spectra is observed, suggesting that the system does not undergo a phase transition down to 20 K. First-principles calculations are performed based on the structural models discussed in the literature. The thermodynamically stable conjugate honeycomb-chained-trimer model (CHCT) [Surf. Sci. 275, L691 (1992), 10.1016/0039-6028(92)90785-5] leads to phonon eigenvalues compatible with the experimental observations in the investigated spectral range. On the basis of the phonon eigenfrequencies, symmetries, and Raman intensities, we assign the measured spectral features to the calculated phonon modes. The good agreement between measured and calculated modes provides a strong argument in favor of the CHCT model.

  7. Mid-Pliocene equatorial Pacific sea surface temperature reconstruction: a multi-proxy perspective

    Science.gov (United States)

    Dowsett, Harry J.; Robinson, Marci M.

    2009-01-01

    The Mid-Pliocene is the most recent interval of sustained global warmth, which can be used to examine conditions predicted for the near future. An accurate spatial representation of the low-latitude Mid-Pliocene Pacific surface ocean is necessary to understand past climate change in the light of forecasts of future change. Mid-Pliocene sea surface temperature (SST) anomalies show a strong contrast between the western equatorial Pacific (WEP) and eastern equatorial Pacific (EEP) regardless of proxy (faunal, alkenone and Mg/Ca). All WEP sites show small differences from modern mean annual temperature, but all EEP sites show significant positive deviation from present-day temperatures by as much as 4.4°C. Our reconstruction reflects SSTs similar to modern in the WEP, warmer than modern in the EEP and eastward extension of the WEP warm pool. The east-west equatorial Pacific SST gradient is decreased, but the pole to equator gradient does not change appreciably. We find it improbable that increased greenhouse gases (GHG) alone would cause such a heterogeneous warming and more likely that the cause of Mid-Pliocene warmth is a combination of several forcings including both increased meridional heat transport and increased GHG.

  8. Water Induced Surface Reconstruction of the Oxygen (2x1) covered Ru(0001)

    Energy Technology Data Exchange (ETDEWEB)

    Maier, Sabine; Cabrera-Sanfelix, Pepa; Stass, Ingeborg; Sanchez-Portal, Daniel; Arnau, Andres; Salmeron, Miquel

    2010-08-06

    Low temperature scanning tunneling microscopy (STM) and density functional theory (DFT) were used to study the adsorption of water on a Ru(0001) surface covered with half monolayer of oxygen. The oxygen atoms occupy hcp sites in an ordered structure with (2x1) periodicity. DFT predicts that water is weakly bound to the unmodified surface, 86 meV compared to the ~;;200 meV water-water H-bond. Instead, we found that water adsorption causes a shift of half of the oxygen atoms from hcp sites to fcc sites, creating a honeycomb structure where water molecules bind strongly to the exposed Ru atoms. The energy cost of reconstructing the oxygen overlayer, around 230 meV per displaced oxygen atom, is more than compensated by the larger adsorption energy of water on the newly exposed Ru atoms. Water forms hydrogen bonds with the fcc O atoms in a (4x2) superstructure due to alternating orientations of the molecules. Heating to 185 K results in the complete desorption of the water layer, leaving behind the oxygen honeycomb structure, which is metastable relative to the original (2x1). This stable structure is not recovered until after heating to temperatures close to 260K.

  9. Nature of monovacancies on quasi-hexagonal structure of reconstructed Au(100) surface

    Energy Technology Data Exchange (ETDEWEB)

    Pieczyrak, Barbara; Trembulowicz, Artur; Antczak, Grażyna, E-mail: antczak@ifd.uni.wroc.pl; Jurczyszyn, Leszek

    2017-06-15

    Highlights: • Surprising nature of surface monovacancies: spontaneous healing. • Determination of vacancy formation energy in the range of 0.34–0.55 eV. • A good agreement between the theoretical (DFT) and experimental (STM) data. - Abstract: Density functional theory and the scanning tunneling microscopy were applied to investigate the nature of the defects on an unrotated reconstructed hexagonal Au(100) surface. We show the correlation between the nature of monovacancies and the geometrical arrangement of the atoms from the first (topmost) layer with respect to the second layer. The vacancies created directly above the atoms from the second layer (on-top position) move spontaneously into the subsurface upon relaxation. For the vacancies created in other places, the subsurface shift is hindered by the energy barrier and the lifted subsurface atom is in the interlayer position. Charge density calculations were compared with results from the scanning tunneling microscopy images which show a good agreement between the theoretical and experimental data.

  10. 3D skin surface reconstruction from a single image by merging global curvature and local texture using the guided filtering for 3D haptic palpation.

    Science.gov (United States)

    Lee, K; Kim, M; Kim, K

    2018-05-11

    Skin surface evaluation has been studied using various imaging techniques. However, all these studies had limited impact because they were performed using visual exam only. To improve on this scenario with haptic feedback, we propose 3D reconstruction of the skin surface using a single image. Unlike extant 3D skin surface reconstruction algorithms, we utilize the local texture and global curvature regions, combining the results for reconstruction. The first entails the reconstruction of global curvature, achieved by bilateral filtering that removes noise on the surface while maintaining the edge (ie, furrow) to obtain the overall curvature. The second entails the reconstruction of local texture, representing the fine wrinkles of the skin, using an advanced form of bilateral filtering. The final image is then composed by merging the two reconstructed images. We tested the curvature reconstruction part by comparing the resulting curvatures with measured values from real phantom objects while local texture reconstruction was verified by measuring skin surface roughness. Then, we showed the reconstructed result of our proposed algorithm via the reconstruction of various real skin surfaces. The experimental results demonstrate that our approach is a promising technology to reconstruct an accurate skin surface with a single skin image. We proposed 3D skin surface reconstruction using only a single camera. We highlighted the utility of global curvature, which has not been considered important in the past. Thus, we proposed a new method for 3D reconstruction that can be used for 3D haptic palpation, dividing the concepts of local and global regions. © 2018 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  11. Curved reconstructions versus three-dimensional surface rendering in the demonstration of cortical lesions in patients with extratemporal epilepsy

    NARCIS (Netherlands)

    Meiners, LC; Scheffers, JM; De Kort, GAP; Burger, H; Van Huffelen, AC; Van Rijen, PC; Van Veelen, CWM

    RATIONALE AND OBJECTIVES. TO compare the visibility and localization of extratemporal cortical lesions in extratemporal epilepsy by using curved reconstruction (CR) and three-dimensional surface rendering (3D SR) of 3D-acquired MR images and to study the degree of confidence with which localizations

  12. Multiproxy summer and winter surface air temperature field reconstructions for southern South America covering the past centuries

    Energy Technology Data Exchange (ETDEWEB)

    Neukom, R.; Grosjean, M.; Wanner, H. [University of Bern, Oeschger Centre for Climate Change Research (OCCR), Bern (Switzerland); University of Bern, Institute of Geography, Climatology and Meteorology, Bern (Switzerland); Luterbacher, J. [Justus Liebig University of Giessen, Department of Geography, Climatology, Climate Dynamics and Climate Change, Giessen (Germany); Villalba, R.; Morales, M.; Srur, A. [CONICET, Instituto Argentino de Nivologia, Glaciologia y Ciencias Ambientales (IANIGLA), Mendoza (Argentina); Kuettel, M. [University of Bern, Oeschger Centre for Climate Change Research (OCCR), Bern (Switzerland); University of Bern, Institute of Geography, Climatology and Meteorology, Bern (Switzerland); University of Washington, Department of Earth and Space Sciences, Seattle (United States); Frank, D. [Swiss Federal Research Institute WSL, Birmensdorf (Switzerland); Jones, P.D. [University of East Anglia, Climatic Research Unit, School of Environmental Sciences, Norwich (United Kingdom); Aravena, J.-C. [Centro de Estudios Cuaternarios de Fuego Patagonia y Antartica (CEQUA), Punta Arenas (Chile); Black, D.E. [Stony Brook University, School of Marine and Atmospheric Sciences, Stony Brook (United States); Christie, D.A.; Urrutia, R. [Universidad Austral de Chile Valdivia, Laboratorio de Dendrocronologia, Facultad de Ciencias Forestales y Recursos Naturales, Valdivia (Chile); D' Arrigo, R. [Earth Institute at Columbia University, Tree-Ring Laboratory, Lamont-Doherty Earth Observatory, Palisades, NY (United States); Lara, A. [Universidad Austral de Chile Valdivia, Laboratorio de Dendrocronologia, Facultad de Ciencias Forestales y Recursos Naturales, Valdivia (Chile); Nucleo Cientifico Milenio FORECOS, Fundacion FORECOS, Valdivia (Chile); Soliz-Gamboa, C. [Utrecht Univ., Inst. of Environmental Biology, Utrecht (Netherlands); Gunten, L. von [Univ. of Bern (Switzerland); Univ. of Massachusetts, Climate System Research Center, Amherst (United States)

    2011-07-15

    We statistically reconstruct austral summer (winter) surface air temperature fields back to ad 900 (1706) using 22 (20) annually resolved predictors from natural and human archives from southern South America (SSA). This represents the first regional-scale climate field reconstruction for parts of the Southern Hemisphere at this high temporal resolution. We apply three different reconstruction techniques: multivariate principal component regression, composite plus scaling, and regularized expectation maximization. There is generally good agreement between the results of the three methods on interannual and decadal timescales. The field reconstructions allow us to describe differences and similarities in the temperature evolution of different sub-regions of SSA. The reconstructed SSA mean summer temperatures between 900 and 1350 are mostly above the 1901-1995 climatology. After 1350, we reconstruct a sharp transition to colder conditions, which last until approximately 1700. The summers in the eighteenth century are relatively warm with a subsequent cold relapse peaking around 1850. In the twentieth century, summer temperatures reach conditions similar to earlier warm periods. The winter temperatures in the eighteenth and nineteenth centuries were mostly below the twentieth century average. The uncertainties of our reconstructions are generally largest in the eastern lowlands of SSA, where the coverage with proxy data is poorest. Verifications with independent summer temperature proxies and instrumental measurements suggest that the interannual and multi-decadal variations of SSA temperatures are well captured by our reconstructions. This new dataset can be used for data/model comparison and data assimilation as well as for detection and attribution studies at sub-continental scales. (orig.)

  13. Evaluation of interpolation methods for surface-based motion compensated tomographic reconstruction for cardiac angiographic C-arm data

    Energy Technology Data Exchange (ETDEWEB)

    Mueller, Kerstin; Schwemmer, Chris; Hornegger, Joachim [Pattern Recognition Lab, Department of Computer Science, Erlangen Graduate School in Advanced Optical Technologies (SAOT), Friedrich-Alexander-Universitaet Erlangen-Nuernberg, Erlangen 91058 (Germany); Zheng Yefeng; Wang Yang [Imaging and Computer Vision, Siemens Corporate Research, Princeton, New Jersey 08540 (United States); Lauritsch, Guenter; Rohkohl, Christopher; Maier, Andreas K. [Siemens AG, Healthcare Sector, Forchheim 91301 (Germany); Schultz, Carl [Thoraxcenter, Erasmus MC, Rotterdam 3000 (Netherlands); Fahrig, Rebecca [Department of Radiology, Stanford University, Stanford, California 94305 (United States)

    2013-03-15

    Purpose: For interventional cardiac procedures, anatomical and functional information about the cardiac chambers is of major interest. With the technology of angiographic C-arm systems it is possible to reconstruct intraprocedural three-dimensional (3D) images from 2D rotational angiographic projection data (C-arm CT). However, 3D reconstruction of a dynamic object is a fundamental problem in C-arm CT reconstruction. The 2D projections are acquired over a scan time of several seconds, thus the projection data show different states of the heart. A standard FDK reconstruction algorithm would use all acquired data for a filtered backprojection and result in a motion-blurred image. In this approach, a motion compensated reconstruction algorithm requiring knowledge of the 3D heart motion is used. The motion is estimated from a previously presented 3D dynamic surface model. This dynamic surface model results in a sparse motion vector field (MVF) defined at control points. In order to perform a motion compensated reconstruction, a dense motion vector field is required. The dense MVF is generated by interpolation of the sparse MVF. Therefore, the influence of different motion interpolation methods on the reconstructed image quality is evaluated. Methods: Four different interpolation methods, thin-plate splines (TPS), Shepard's method, a smoothed weighting function, and a simple averaging, were evaluated. The reconstruction quality was measured on phantom data, a porcine model as well as on in vivo clinical data sets. As a quality index, the 2D overlap of the forward projected motion compensated reconstructed ventricle and the segmented 2D ventricle blood pool was quantitatively measured with the Dice similarity coefficient and the mean deviation between extracted ventricle contours. For the phantom data set, the normalized root mean square error (nRMSE) and the universal quality index (UQI) were also evaluated in 3D image space. Results: The quantitative evaluation of

  14. Evaluation of interpolation methods for surface-based motion compensated tomographic reconstruction for cardiac angiographic C-arm data

    International Nuclear Information System (INIS)

    Müller, Kerstin; Schwemmer, Chris; Hornegger, Joachim; Zheng Yefeng; Wang Yang; Lauritsch, Günter; Rohkohl, Christopher; Maier, Andreas K.; Schultz, Carl; Fahrig, Rebecca

    2013-01-01

    Purpose: For interventional cardiac procedures, anatomical and functional information about the cardiac chambers is of major interest. With the technology of angiographic C-arm systems it is possible to reconstruct intraprocedural three-dimensional (3D) images from 2D rotational angiographic projection data (C-arm CT). However, 3D reconstruction of a dynamic object is a fundamental problem in C-arm CT reconstruction. The 2D projections are acquired over a scan time of several seconds, thus the projection data show different states of the heart. A standard FDK reconstruction algorithm would use all acquired data for a filtered backprojection and result in a motion-blurred image. In this approach, a motion compensated reconstruction algorithm requiring knowledge of the 3D heart motion is used. The motion is estimated from a previously presented 3D dynamic surface model. This dynamic surface model results in a sparse motion vector field (MVF) defined at control points. In order to perform a motion compensated reconstruction, a dense motion vector field is required. The dense MVF is generated by interpolation of the sparse MVF. Therefore, the influence of different motion interpolation methods on the reconstructed image quality is evaluated. Methods: Four different interpolation methods, thin-plate splines (TPS), Shepard's method, a smoothed weighting function, and a simple averaging, were evaluated. The reconstruction quality was measured on phantom data, a porcine model as well as on in vivo clinical data sets. As a quality index, the 2D overlap of the forward projected motion compensated reconstructed ventricle and the segmented 2D ventricle blood pool was quantitatively measured with the Dice similarity coefficient and the mean deviation between extracted ventricle contours. For the phantom data set, the normalized root mean square error (nRMSE) and the universal quality index (UQI) were also evaluated in 3D image space. Results: The quantitative evaluation of all

  15. SLAM-based dense surface reconstruction in monocular Minimally Invasive Surgery and its application to Augmented Reality.

    Science.gov (United States)

    Chen, Long; Tang, Wen; John, Nigel W; Wan, Tao Ruan; Zhang, Jian Jun

    2018-05-01

    While Minimally Invasive Surgery (MIS) offers considerable benefits to patients, it also imposes big challenges on a surgeon's performance due to well-known issues and restrictions associated with the field of view (FOV), hand-eye misalignment and disorientation, as well as the lack of stereoscopic depth perception in monocular endoscopy. Augmented Reality (AR) technology can help to overcome these limitations by augmenting the real scene with annotations, labels, tumour measurements or even a 3D reconstruction of anatomy structures at the target surgical locations. However, previous research attempts of using AR technology in monocular MIS surgical scenes have been mainly focused on the information overlay without addressing correct spatial calibrations, which could lead to incorrect localization of annotations and labels, and inaccurate depth cues and tumour measurements. In this paper, we present a novel intra-operative dense surface reconstruction framework that is capable of providing geometry information from only monocular MIS videos for geometry-aware AR applications such as site measurements and depth cues. We address a number of compelling issues in augmenting a scene for a monocular MIS environment, such as drifting and inaccurate planar mapping. A state-of-the-art Simultaneous Localization And Mapping (SLAM) algorithm used in robotics has been extended to deal with monocular MIS surgical scenes for reliable endoscopic camera tracking and salient point mapping. A robust global 3D surface reconstruction framework has been developed for building a dense surface using only unorganized sparse point clouds extracted from the SLAM. The 3D surface reconstruction framework employs the Moving Least Squares (MLS) smoothing algorithm and the Poisson surface reconstruction framework for real time processing of the point clouds data set. Finally, the 3D geometric information of the surgical scene allows better understanding and accurate placement AR augmentations

  16. Positron probes of the Ge(1 0 0) surface: The effects of surface reconstructions and electron-positron correlations on positron trapping and annihilation characteristics

    International Nuclear Information System (INIS)

    Fazleev, N.G.; Jung, E.; Weiss, A.H.

    2007-01-01

    Positron annihilation induced Auger electron spectroscopy (PAES) has been applied to study the Ge(1 0 0) surface. The high-resolution PAES spectrum from the Ge(1 0 0) surface displays several strong Auger peaks corresponding to M 4,5 N 1 N 2,3 , M 2,3 M 4,5 M 4,5 , M 2,3 M 4,5 V and M 1 M 4,5 M 4,5 Auger transitions. The integrated peak intensities of Auger transitions are used to obtain experimental annihilation probabilities for the Ge 3d and 3p core level electrons. These experimental results are analyzed by performing calculations of positron surface states and annihilation characteristics of surface trapped positrons with relevant Ge core-level electrons for the non-reconstructed and reconstructed Ge(1 0 0)-p(2 x 1), Ge(1 0 0)-p(2 x 2) and Ge(1 0 0)-c(4 x 2) surfaces. It is found that the positron surface state wave function extends into the Ge lattice in the regions where atoms are displaced from their ideal terminated positions due to reconstructions. Estimates of the positron binding energy and the positron annihilation characteristics reveal their sensitivity to the specific atomic structure of the topmost layers of Ge(1 0 0). A comparison with PAES data reveals an agreement with theoretical core annihilation probabilities for the Auger transitions considered

  17. A comparison of semiglobal and local dense matching algorithms for surface reconstruction

    Directory of Open Access Journals (Sweden)

    E. Dall'Asta

    2014-06-01

    Full Text Available Encouraged by the growing interest in automatic 3D image-based reconstruction, the development and improvement of robust stereo matching techniques is one of the most investigated research topic of the last years in photogrammetry and computer vision. The paper is focused on the comparison of some stereo matching algorithms (local and global which are very popular both in photogrammetry and computer vision. In particular, the Semi-Global Matching (SGM, which realizes a pixel-wise matching and relies on the application of consistency constraints during the matching cost aggregation, will be discussed. The results of some tests performed on real and simulated stereo image datasets, evaluating in particular the accuracy of the obtained digital surface models, will be presented. Several algorithms and different implementation are considered in the comparison, using freeware software codes like MICMAC and OpenCV, commercial software (e.g. Agisoft PhotoScan and proprietary codes implementing Least Square e Semi-Global Matching algorithms. The comparisons will also consider the completeness and the level of detail within fine structures, and the reliability and repeatability of the obtainable data.

  18. A comparison of semiglobal and local dense matching algorithms for surface reconstruction

    Science.gov (United States)

    Dall'Asta, E.; Roncella, R.

    2014-06-01

    Encouraged by the growing interest in automatic 3D image-based reconstruction, the development and improvement of robust stereo matching techniques is one of the most investigated research topic of the last years in photogrammetry and computer vision. The paper is focused on the comparison of some stereo matching algorithms (local and global) which are very popular both in photogrammetry and computer vision. In particular, the Semi-Global Matching (SGM), which realizes a pixel-wise matching and relies on the application of consistency constraints during the matching cost aggregation, will be discussed. The results of some tests performed on real and simulated stereo image datasets, evaluating in particular the accuracy of the obtained digital surface models, will be presented. Several algorithms and different implementation are considered in the comparison, using freeware software codes like MICMAC and OpenCV, commercial software (e.g. Agisoft PhotoScan) and proprietary codes implementing Least Square e Semi-Global Matching algorithms. The comparisons will also consider the completeness and the level of detail within fine structures, and the reliability and repeatability of the obtainable data.

  19. Statistical shape model-based reconstruction of a scaled, patient-specific surface model of the pelvis from a single standard AP x-ray radiograph

    Energy Technology Data Exchange (ETDEWEB)

    Zheng Guoyan [Institute for Surgical Technology and Biomechanics, University of Bern, Stauffacherstrasse 78, CH-3014 Bern (Switzerland)

    2010-04-15

    Purpose: The aim of this article is to investigate the feasibility of using a statistical shape model (SSM)-based reconstruction technique to derive a scaled, patient-specific surface model of the pelvis from a single standard anteroposterior (AP) x-ray radiograph and the feasibility of estimating the scale of the reconstructed surface model by performing a surface-based 3D/3D matching. Methods: Data sets of 14 pelvises (one plastic bone, 12 cadavers, and one patient) were used to validate the single-image based reconstruction technique. This reconstruction technique is based on a hybrid 2D/3D deformable registration process combining a landmark-to-ray registration with a SSM-based 2D/3D reconstruction. The landmark-to-ray registration was used to find an initial scale and an initial rigid transformation between the x-ray image and the SSM. The estimated scale and rigid transformation were used to initialize the SSM-based 2D/3D reconstruction. The optimal reconstruction was then achieved in three stages by iteratively matching the projections of the apparent contours extracted from a 3D model derived from the SSM to the image contours extracted from the x-ray radiograph: Iterative affine registration, statistical instantiation, and iterative regularized shape deformation. The image contours are first detected by using a semiautomatic segmentation tool based on the Livewire algorithm and then approximated by a set of sparse dominant points that are adaptively sampled from the detected contours. The unknown scales of the reconstructed models were estimated by performing a surface-based 3D/3D matching between the reconstructed models and the associated ground truth models that were derived from a CT-based reconstruction method. Such a matching also allowed for computing the errors between the reconstructed models and the associated ground truth models. Results: The technique could reconstruct the surface models of all 14 pelvises directly from the landmark

  20. Localization of endocardial ectopic activity by means of noninvasive endocardial surface current density reconstruction

    Energy Technology Data Exchange (ETDEWEB)

    Lai Dakun; Liu Chenguang; Eggen, Michael D; He Bin [Department of Biomedical Engineering, University of Minnesota, MN (United States); Iaizzo, Paul A, E-mail: binhe@umn.edu [Department of Surgery, University of Minnesota, MN (United States)

    2011-07-07

    Localization of the source of cardiac ectopic activity has direct clinical benefits for determining the location of the corresponding ectopic focus. In this study, a recently developed current-density (CD)-based localization approach was experimentally evaluated in noninvasively localizing the origin of the cardiac ectopic activity from body-surface potential maps (BSPMs) in a well-controlled experimental setting. The cardiac ectopic activities were induced in four well-controlled intact pigs by single-site pacing at various sites within the left ventricle (LV). In each pacing study, the origin of the induced ectopic activity was localized by reconstructing the CD distribution on the endocardial surface of the LV from the measured BSPMs and compared with the estimated single moving dipole (SMD) solution and precise pacing site (PS). Over the 60 analyzed beats corresponding to ten pacing sites (six for each), the mean and standard deviation of the distance between the locations of maximum CD value and the corresponding PSs were 16.9 mm and 4.6 mm, respectively. In comparison, the averaged distance between the SMD locations and the corresponding PSs was slightly larger (18.4 {+-} 3.4 mm). The obtained CD distribution of activated sources extending from the stimulus site also showed high consistency with the endocardial potential maps estimated by a minimally invasive endocardial mapping system. The present experimental results suggest that the CD method is able to locate the approximate site of the origin of a cardiac ectopic activity, and that the distribution of the CD can portray the propagation of early activation of an ectopic beat.

  1. Intercomparison of the Extended Reconstructed Sea Surface Temperature v4 and v3b Datasets

    Science.gov (United States)

    Wang, Jinping; Chen, Xianyao

    2018-04-01

    Version 4 (v4) of the Extended Reconstructed Sea Surface Temperature (ERSST) dataset is compared with its precedent, the widely used version 3b (v3b). The essential upgrades applied to v4 lead to remarkable differences in the characteristics of the sea surface temperature (SST) anomaly (SSTa) in both the temporal and spatial domains. First, the largest discrepancy of the global mean SSTa values around the 1940s is due to ship-observation corrections made to reconcile observations from buckets and engine intake thermometers. Second, differences in global and regional mean SSTa values between v4 and v3b exhibit a downward trend (around -0.032°C per decade) before the 1940s, an upward trend (around 0.014°C per decade) during the period of 1950-2015, interdecadal oscillation with one peak around the 1980s, and two troughs during the 1960s and 2000s, respectively. This does not derive from treatments of the polar or the other data-void regions, since the difference of the SSTa does not share the common features. Third, the spatial pattern of the ENSO-related variability of v4 exhibits a wider but weaker cold tongue in the tropical region of the Pacific Ocean compared with that of v3b, which could be attributed to differences in gap-filling assumptions since the latter features satellite observations whereas the former features in situ ones. This intercomparison confirms that the structural uncertainty arising from underlying assumptions on the treatment of diverse SST observations even in the same SST product family is the main source of significant SST differences in the temporal domain. Why this uncertainty introduces artificial decadal oscillations remains unknown.

  2. Three-dimensional surface reconstruction imaging for evaluation of congenital heart disease from ECG-triggered MR images

    International Nuclear Information System (INIS)

    Vannier, M.W.; Laschinger, J.; Knapp, R.H.; Gutierrez, F.R.; Gronnemeyer, S.A.

    1987-01-01

    Three-dimensional surface reconstruction images of the heart and great vessels were produced from contiguous sequences of electrocardiographically triggered MR images in 25 patients with congenital heart disease and in three healthy subjects. The imaging data were semiautomatically processed to separate the epicardial and endocardial surfaces and to define the outline of the enclosed blood volumes on a section by section basis. Images were obtained at 5-mm intervals in patients aged 3 months to 30 years with anomalies of the great vessels, tetralogy of Fallot, septal defects, pulmonary atresia, and other congenital heart malformations. The results were used to facilitate the surgical treatment of these patients and were compared with echocardiographic and cineradiographic studies, and with surgical findings or pathologic specimens. These surface reconstruction images were useful for communicating the results of diagnostic examinations to cardiac surgeons, for sizing and location of intracardiac defects, for imaging the pulmonary venous drainage, and for assessing regional and global function

  3. Fourier transform profilometry (FTP) using an innovative band-pass filter for accurate 3-D surface reconstruction

    Science.gov (United States)

    Chen, Liang-Chia; Ho, Hsuan-Wei; Nguyen, Xuan-Loc

    2010-02-01

    This article presents a novel band-pass filter for Fourier transform profilometry (FTP) for accurate 3-D surface reconstruction. FTP can be employed to obtain 3-D surface profiles by one-shot images to achieve high-speed measurement. However, its measurement accuracy has been significantly influenced by the spectrum filtering process required to extract the phase information representing various surface heights. Using the commonly applied 2-D Hanning filter, the measurement errors could be up to 5-10% of the overall measuring height and it is unacceptable to various industrial application. To resolve this issue, the article proposes an elliptical band-pass filter for extracting the spectral region possessing essential phase information for reconstructing accurate 3-D surface profiles. The elliptical band-pass filter was developed and optimized to reconstruct 3-D surface models with improved measurement accuracy. Some experimental results verify that the accuracy can be effectively enhanced by using the elliptical filter. The accuracy improvement of 44.1% and 30.4% can be achieved in 3-D and sphericity measurement, respectively, when the elliptical filter replaces the traditional filter as the band-pass filtering method. Employing the developed method, the maximum measured error can be kept within 3.3% of the overall measuring range.

  4. Fermi-surface reconstruction and the origin of high-temperature superconductivity

    International Nuclear Information System (INIS)

    Norman, M.R.

    2010-01-01

    lattice into a d 9 configuration, with one localized hole in the 3d shell per copper site. Given the localized nature of this state, it was questioned whether a momentum-space picture was an appropriate description of the physics of the cuprates. In fact, this question relates to a long-standing debate in the physics community: Since the parent state is also an antiferromagnet, one can, in principle, map the Mott insulator to a band insulator with magnetic order. In this 'Slater' picture, Mott physics is less relevant than the magnetism itself. It is therefore unclear which of the two, magnetism or Mott physics, is more fundamentally tied to superconductivity in the cuprates. After twenty years of effort, definitive quantum oscillations that could be used to map the Fermi surface were finally observed in a high-temperature cuprate superconductor in 2007. This and subsequent studies reveal a profound rearrangement of the Fermi surface in underdoped cuprates. The cause of the reconstruction, and its implication for the origin of high-temperature superconductivity, is a subject of active debate.

  5. Multi-sheet surface rebinning methods for reconstruction from asymmetrically truncated cone beam projections: I. Approximation and optimality

    International Nuclear Information System (INIS)

    Betcke, Marta M; Lionheart, William R B

    2013-01-01

    The mechanical motion of the gantry in conventional cone beam CT scanners restricts the speed of data acquisition in applications with near real time requirements. A possible resolution of this problem is to replace the moving source detector assembly with static parts that are electronically activated. An example of such a system is the Rapiscan Systems RTT80 real time tomography scanner, with a static ring of sources and axially offset static cylinder of detectors. A consequence of such a design is asymmetrical axial truncation of the cone beam projections resulting, in the sense of integral geometry, in severely incomplete data. In particular we collect data only in a fraction of the Tam–Danielsson window, hence the standard cone beam reconstruction techniques do not apply. In this work we propose a family of multi-sheet surface rebinning methods for reconstruction from such truncated projections. The proposed methods combine analytical and numerical ideas utilizing linearity of the ray transform to reconstruct data on multi-sheet surfaces, from which the volumetric image is obtained through deconvolution. In this first paper in the series, we discuss the rebinning to multi-sheet surfaces. In particular we concentrate on the underlying transforms on multi-sheet surfaces and their approximation with data collected by offset multi-source scanning geometries like the RTT. The optimal multi-sheet surface and the corresponding rebinning function are found as a solution of a variational problem. In the case of the quadratic objective, the variational problem for the optimal rebinning pair can be solved by a globally convergent iteration. Examples of optimal rebinning pairs are computed for different trajectories. We formulate the axial deconvolution problem for the recovery of the volumetric image from the reconstructions on multi-sheet surfaces. Efficient and stable solution of the deconvolution problem is the subject of the second paper in this series (Betcke and

  6. Friction Regimes of Water-Lubricated Diamond (111): Role of Interfacial Ether Groups and Tribo-Induced Aromatic Surface Reconstructions

    Science.gov (United States)

    Kuwahara, Takuya; Moras, Gianpietro; Moseler, Michael

    2017-09-01

    Large-scale quantum molecular dynamics of water-lubricated diamond (111) surfaces in sliding contact reveals multiple friction regimes. While water starvation causes amorphization of the tribological interface, small H2O traces are sufficient to preserve crystallinity. This can result in high friction due to cold welding via ether groups or in ultralow friction due to aromatic surface passivation triggered by tribo-induced Pandey reconstruction. At higher water coverage, Grotthuss-type diffusion and H2O dissociation yield dense H /OH surface passivation leading to another ultralow friction regime.

  7. Reconstructing the Surface Permittivity Distribution from Data Measured by the CONSERT Instrument aboard Rosetta: Method and Simulations

    Science.gov (United States)

    Plettemeier, D.; Statz, C.; Hegler, S.; Herique, A.; Kofman, W. W.

    2014-12-01

    One of the main scientific objectives of the Comet Nucleus Sounding Experiment by Radiowave Transmission (CONSERT) aboard Rosetta is to perform a dielectric characterization of comet 67P/Chuyurmov-Gerasimenko's nucleus by means of a bi-static sounding between the lander Philae launched onto the comet's surface and the orbiter Rosetta. For the sounding, the lander part of CONSERT will receive and process the radio signal emitted by the orbiter part of the instrument and transmit a signal to the orbiter to be received by CONSERT. CONSERT will also be operated as bi-static RADAR during the descent of the lander Philae onto the comet's surface. From data measured during the descent, we aim at reconstructing a surface permittivity map of the comet at the landing site and along the path below the descent trajectory. This surface permittivity map will give information on the bulk material right below and around the landing site and the surface roughness in areas covered by the instrument along the descent. The proposed method to estimate the surface permittivity distribution is based on a least-squares based inversion approach in frequency domain. The direct problem of simulating the wave-propagation between lander and orbiter at line-of-sight and the signal reflected on the comet's surface is modelled using a dielectric physical optics approximation. Restrictions on the measurement positions by the descent orbitography and limitations on the instrument dynamic range will be dealt with by application of a regularization technique where the surface permittivity distribution and the gradient with regard to the permittivity is projected in a domain defined by a viable model of the spatial material and roughness distribution. The least-squares optimization step of the reconstruction is performed in such domain on a reduced set of parameters yielding stable results. The viability of the proposed method is demonstrated by reconstruction results based on simulated data.

  8. Effects of illumination differences on photometric stereo shape-and-albedo-from-shading for precision lunar surface reconstruction

    Science.gov (United States)

    Chung Liu, Wai; Wu, Bo; Wöhler, Christian

    2018-02-01

    Photoclinometric surface reconstruction techniques such as Shape-from-Shading (SfS) and Shape-and-Albedo-from-Shading (SAfS) retrieve topographic information of a surface on the basis of the reflectance information embedded in the image intensity of each pixel. SfS or SAfS techniques have been utilized to generate pixel-resolution digital elevation models (DEMs) of the Moon and other planetary bodies. Photometric stereo SAfS analyzes images under multiple illumination conditions to improve the robustness of reconstruction. In this case, the directional difference in illumination between the images is likely to affect the quality of the reconstruction result. In this study, we quantitatively investigate the effects of illumination differences on photometric stereo SAfS. Firstly, an algorithm for photometric stereo SAfS is developed, and then, an error model is derived to analyze the relationships between the azimuthal and zenith angles of illumination of the images and the reconstruction qualities. The developed algorithm and error model were verified with high-resolution images collected by the Narrow Angle Camera (NAC) of the Lunar Reconnaissance Orbiter Camera (LROC). Experimental analyses reveal that (1) the resulting error in photometric stereo SAfS depends on both the azimuthal and the zenith angles of illumination as well as the general intensity of the images and (2) the predictions from the proposed error model are consistent with the actual slope errors obtained by photometric stereo SAfS using the LROC NAC images. The proposed error model enriches the theory of photometric stereo SAfS and is of significance for optimized lunar surface reconstruction based on SAfS techniques.

  9. 3D reconstruction of a patient-specific surface model of the proximal femur from calibrated x-ray radiographs: A validation study

    International Nuclear Information System (INIS)

    Zheng Guoyan; Schumann, Steffen

    2009-01-01

    Twenty-three femurs (one plastic bone and twenty-two cadaver bones) with both nonpathologic and pathologic cases were considered to validate a statistical shape model based technique for three-dimensional (3D) reconstruction of a patient-specific surface model from calibrated x-ray radiographs. The 3D reconstruction technique is based on an iterative nonrigid registration of the features extracted from a statistically instantiated 3D surface model to those interactively identified from the radiographs. The surface models reconstructed from the radiographs were compared to the associated ground truths derived either from a 3D CT-scan reconstruction method or from a 3D laser-scan reconstruction method and an average error distance of 0.95 mm were found. Compared to the existing works, our approach has the advantage of seamlessly handling both nonpathologic and pathologic cases even when the statistical shape model that we used was constructed from surface models of nonpathologic bones.

  10. Reconstructing the Economy: A Methodological Journey from the Surface to the Essence and Back

    Directory of Open Access Journals (Sweden)

    Peter Karl Fleissner

    2011-10-01

    Full Text Available The essential methodology in social science to “understand” phenomena is informed abstraction. But the way - how and what for the abstraction process is shaped - divides the economists into various schools. While mainstream econ- omists abstract from any links of the economy to human beings - replacing them by selfish machines maximizing their prof- its or individual utilities, and neglecting any deeper analysis of the basic constructions they use (like prices or money, heterodox economists try to look behind the surface, link them to certain periods of history and to the source of all value: humans are social beings and cannot exist without mutuality. The paper presents a heterodox way to reconstruct contempo- rary capitalist economies by applying the new science of information with its evolutionary concepts. It starts the description on a very abstract level: useful things and services produced by specialized labor. Step by step new layers of economic activities and related information are added and become the basis for the next one. Vice versa economic activities on lower layers become controlled and modified by higher layers. One can see that the higher controlling principles in contemporary capitalist economies do not assist the economic, social, and cultural well-being of the majority of people, but function ac- cording to the self-interest of a minority. For the first time in history capitalism has developed new technologies that in prin- ciple could allow for the participation of the many, to create abundance of information, and to offer tools for building a de- mocratic and sustainable society. But by the same capitalism, rigid Intellectual Property Rights and severe copy protection mechanisms enforce artificial shortage of information goods.

  11. Reconstruction of droughts in India using multiple land-surface models (1951-2015)

    Science.gov (United States)

    Mishra, Vimal; Shah, Reepal; Azhar, Syed; Shah, Harsh; Modi, Parth; Kumar, Rohini

    2018-04-01

    India has witnessed some of the most severe historical droughts in the current decade, and severity, frequency, and areal extent of droughts have been increasing. As a large part of the population of India is dependent on agriculture, soil moisture drought affecting agricultural activities (crop yields) has significant impacts on socio-economic conditions. Due to limited observations, soil moisture is generally simulated using land-surface hydrological models (LSMs); however, these LSM outputs have uncertainty due to many factors, including errors in forcing data and model parameterization. Here we reconstruct agricultural drought events over India during the period of 1951-2015 based on simulated soil moisture from three LSMs, the Variable Infiltration Capacity (VIC), the Noah, and the Community Land Model (CLM). Based on simulations from the three LSMs, we find that major drought events occurred in 1987, 2002, and 2015 during the monsoon season (June through September). During the Rabi season (November through February), major soil moisture droughts occurred in 1966, 1973, 2001, and 2003. Soil moisture droughts estimated from the three LSMs are comparable in terms of their spatial coverage; however, differences are found in drought severity. Moreover, we find a higher uncertainty in simulated drought characteristics over a large part of India during the major crop-growing season (Rabi season, November to February: NDJF) compared to those of the monsoon season (June to September: JJAS). Furthermore, uncertainty in drought estimates is higher for severe and localized droughts. Higher uncertainty in the soil moisture droughts is largely due to the difference in model parameterizations (especially soil depth), resulting in different persistence of soil moisture simulated by the three LSMs. Our study highlights the importance of accounting for the LSMs' uncertainty and consideration of the multi-model ensemble system for the real-time monitoring and prediction of

  12. DINEOF reconstruction of clouded images including error maps – application to the Sea-Surface Temperature around Corsican Island

    Directory of Open Access Journals (Sweden)

    J.-M. Beckers

    2006-01-01

    Full Text Available We present an extension to the Data INterpolating Empirical Orthogonal Functions (DINEOF technique which allows not only to fill in clouded images but also to provide an estimation of the error covariance of the reconstruction. This additional information is obtained by an analogy with optimal interpolation. It is shown that the error fields can be obtained with a clever rearrangement of calculations at a cost comparable to that of the interpolation itself. The method is presented on the reconstruction of sea-surface temperature in the Ligurian Sea and around the Corsican Island (Mediterranean Sea, including the calculation of inter-annual variability of average surface values and their expected errors. The application shows that the error fields are not only able to reflect the data-coverage structure but also the covariances of the physical fields.

  13. Paleoclimatic reconstructions in western Canada from borehole temperature logs: surface air temperature forcing and groundwater flow

    Czech Academy of Sciences Publication Activity Database

    Majorowicz, J.; Grasby, S. E.; Ferguson, G.; Šafanda, Jan; Skinner, W.

    2006-01-01

    Roč. 2, č. 1 (2006), s. 1-10 ISSN 1814-9324 Institutional research plan: CEZ:AV0Z30120515 Keywords : palaeoclimatic reconstructions * Canada * borehole temperatures Subject RIV: DC - Siesmology, Volcanology, Earth Structure

  14. Simulation of mirror surfaces for virtual estimation of visibility lines for 3D motor vehicle collision reconstruction.

    Science.gov (United States)

    Leipner, Anja; Dobler, Erika; Braun, Marcel; Sieberth, Till; Ebert, Lars

    2017-10-01

    3D reconstructions of motor vehicle collisions are used to identify the causes of these events and to identify potential violations of traffic regulations. Thus far, the reconstruction of mirrors has been a problem since they are often based on approximations or inaccurate data. Our aim with this paper was to confirm that structured light scans of a mirror improve the accuracy of simulating the field of view of mirrors. We analyzed the performances of virtual mirror surfaces based on structured light scans using real mirror surfaces and their reflections as references. We used an ATOS GOM III scanner to scan the mirrors and processed the 3D data using Geomagic Wrap. For scene reconstruction and to generate virtual images, we used 3ds Max. We compared the simulated virtual images and photographs of real scenes using Adobe Photoshop. Our results showed that we achieved clear and even mirror results and that the mirrors behaved as expected. The greatest measured deviation between an original photo and the corresponding virtual image was 20 pixels in the transverse direction for an image width of 4256 pixels. We discussed the influences of data processing and alignment of the 3D models on the results. The study was limited to a distance of 1.6m, and the method was not able to simulate an interior mirror. In conclusion, structured light scans of mirror surfaces can be used to simulate virtual mirror surfaces with regard to 3D motor vehicle collision reconstruction. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Three-dimensional reconstruction of the topographical cerebral surface anatomy for presurgical planning with free OsiriX Software.

    Science.gov (United States)

    Harput, Mehmet V; Gonzalez-Lopez, Pablo; Türe, Uğur

    2014-09-01

    During surgery for intrinsic brain lesions, it is important to distinguish the pathological gyrus from the surrounding normal sulci and gyri. This task is usually tedious because of the pia-arachnoid membranes with their arterial and venous complexes that obscure the underlying anatomy. Moreover, most tumors grow in the white matter without initially distorting the cortical anatomy, making their direct visualization more difficult. To create and evaluate a simple and free surgical planning tool to simulate the anatomy of the surgical field with and without vessels. We used free computer software (OsiriX Medical Imaging Software) that allowed us to create 3-dimensional reconstructions of the cerebral surface with and without cortical vessels. These reconstructions made use of magnetic resonance images from 51 patients with neocortical supratentorial lesions operated on over a period of 21 months (June 2011 to February 2013). The 3-dimensional (3-D) anatomic images were compared with the true surgical view to evaluate their accuracy. In all patients, the landmarks determined by 3-D reconstruction were cross-checked during surgery with high-resolution ultrasonography; in select cases, they were also checked with indocyanine green videoangiography. The reconstructed neurovascular structures were confirmed intraoperatively in all patients. We found this technique to be extremely useful in achieving pure lesionectomy, as it defines tumor's borders precisely. A 3-D reconstruction of the cortical surface can be easily created with free OsiriX software. This technique helps the surgeon perfect the mentally created 3-D picture of the tumor location to carry out cleaner, safer surgeries.

  16. Positron probes of the Ge(1 0 0) surface: The effects of surface reconstructions and electron-positron correlations on positron trapping and annihilation characteristics

    Energy Technology Data Exchange (ETDEWEB)

    Fazleev, N.G. [Department of Physics, University of Texas at Arlington, Box 19059, Arlington, TX 76019-0059 (United States) and Department of Physics, Kazan State University, Kazan 420008 (Russian Federation)]. E-mail: Fazleev@uta.edu; Jung, E. [Department of Physics, University of Texas at Arlington, Box 19059, Arlington, TX 76019-0059 (United States); Weiss, A.H. [Department of Physics, University of Texas at Arlington, Box 19059, Arlington, TX 76019-0059 (United States)

    2007-08-15

    Positron annihilation induced Auger electron spectroscopy (PAES) has been applied to study the Ge(1 0 0) surface. The high-resolution PAES spectrum from the Ge(1 0 0) surface displays several strong Auger peaks corresponding to M{sub 4,5}N{sub 1}N{sub 2,3}, M{sub 2,3}M{sub 4,5}M{sub 4,5}, M{sub 2,3}M{sub 4,5}V and M{sub 1}M{sub 4,5}M{sub 4,5} Auger transitions. The integrated peak intensities of Auger transitions are used to obtain experimental annihilation probabilities for the Ge 3d and 3p core level electrons. These experimental results are analyzed by performing calculations of positron surface states and annihilation characteristics of surface trapped positrons with relevant Ge core-level electrons for the non-reconstructed and reconstructed Ge(1 0 0)-p(2 x 1), Ge(1 0 0)-p(2 x 2) and Ge(1 0 0)-c(4 x 2) surfaces. It is found that the positron surface state wave function extends into the Ge lattice in the regions where atoms are displaced from their ideal terminated positions due to reconstructions. Estimates of the positron binding energy and the positron annihilation characteristics reveal their sensitivity to the specific atomic structure of the topmost layers of Ge(1 0 0). A comparison with PAES data reveals an agreement with theoretical core annihilation probabilities for the Auger transitions considered.

  17. Novel (1 × 1)-reconstructions and native defects of TiO{sub 2} anatase (101) surface

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Qinggao, E-mail: wangqinggao1984@126.com [Institute for Computational Materials Science, School of Physics and Electronics, Henan University, Kaifeng 475004 (China); Department of Physics and Electrical Engineering, Anyang Normal University, Anyang, Henan Province 455000 (China); Ren, Fengzhu [Institute for Computational Materials Science, School of Physics and Electronics, Henan University, Kaifeng 475004 (China); Dong, Huafeng [School of Physics and Optoelectronic Engineering, Guangdong University of Technology, Guangzhou 510006 (China); Wang, Yuanxu, E-mail: wangyx@henu.edu.cn [Institute for Computational Materials Science, School of Physics and Electronics, Henan University, Kaifeng 475004 (China)

    2017-05-31

    Highlights: • Acceptor energy levels are induced by O interstitials; corresponding to a transition of indirect-to-direct band gap and a narrowing of band gap. • The Fermi levels of defected and reconstructed TiO{sub 2} anatse (101) can be modulated in a wide range. - Abstract: In this paper, reconstructions and native defects of TiO{sub 2} anatase (101) surface are studied using the state-of-the-art theoretical method. We find that O interstitials are dominated defects at an oxidization environment. These O interstitials induce acceptor energy levels, corresponding to an indirect-direct band transition and a bandgap narrowing. And thus, the experimental result that an O-rich anatase TiO{sub 2} has the higher photocatalytic activity can be understood. The formation of O vacancies and Ti interstitials becomes feasible at a reduced condition, and reconstructed TiO{sub 2} anatase (101)-(1 × 1) structures present with increasing reduction degree. Furthermore, the Fermi levels of defected and reconstructed TiO{sub 2} anatse (101) can be modulated in a wide range (i.e., nearly the whole band gap), which are different from those of TiO{sub 2} rutile (110).

  18. Isotropic 3D cardiac cine MRI allows efficient sparse segmentation strategies based on 3D surface reconstruction.

    Science.gov (United States)

    Odille, Freddy; Bustin, Aurélien; Liu, Shufang; Chen, Bailiang; Vuissoz, Pierre-André; Felblinger, Jacques; Bonnemains, Laurent

    2018-05-01

    Segmentation of cardiac cine MRI data is routinely used for the volumetric analysis of cardiac function. Conventionally, 2D contours are drawn on short-axis (SAX) image stacks with relatively thick slices (typically 8 mm). Here, an acquisition/reconstruction strategy is used for obtaining isotropic 3D cine datasets; reformatted slices are then used to optimize the manual segmentation workflow. Isotropic 3D cine datasets were obtained from multiple 2D cine stacks (acquired during free-breathing in SAX and long-axis (LAX) orientations) using nonrigid motion correction (cine-GRICS method) and super-resolution. Several manual segmentation strategies were then compared, including conventional SAX segmentation, LAX segmentation in three views only, and combinations of SAX and LAX slices. An implicit B-spline surface reconstruction algorithm is proposed to reconstruct the left ventricular cavity surface from the sparse set of 2D contours. All tested sparse segmentation strategies were in good agreement, with Dice scores above 0.9 despite using fewer slices (3-6 sparse slices instead of 8-10 contiguous SAX slices). When compared to independent phase-contrast flow measurements, stroke volumes computed from four or six sparse slices had slightly higher precision than conventional SAX segmentation (error standard deviation of 5.4 mL against 6.1 mL) at the cost of slightly lower accuracy (bias of -1.2 mL against 0.2 mL). Functional parameters also showed a trend to improved precision, including end-diastolic volumes, end-systolic volumes, and ejection fractions). The postprocessing workflow of 3D isotropic cardiac imaging strategies can be optimized using sparse segmentation and 3D surface reconstruction. Magn Reson Med 79:2665-2675, 2018. © 2017 International Society for Magnetic Resonance in Medicine. © 2017 International Society for Magnetic Resonance in Medicine.

  19. Surface Reconstruction for Preparation of Plasmonic Au/TiO₂ Nanoparticle with Perfect Hetero Interface and Improved Photocatalytic Capacity.

    Science.gov (United States)

    Yuan, Guoqiu; Ping, Chen; Zhao, Qin; Cao, Min; Jin, Yonglong; Ge, Cunwang

    2018-07-01

    The photocatalytic activity of plasmonic Au/TiO2 nanoparticles (NPs) is dependent on distances between Au and TiO2. The preparation of plasmonic NPs is still a challenge because of an inherent lattice mismatch on heterogeneous interfaces. The combination between Au and TiO2 NPs often exhibits physical adsorption, which affect block the electron transferring process by photo-induction from TiO2 to Au NPs and weaken the photocatalytic activity. In this work an approach for preparing plasmonic Au/TiO2 NPs with perfect hetero-interface was proposed based on reconstruction of anatase TiO2 with (101) surface and in-situ reduction of Au NPs. Under UV-irradiation, anatase TiO2 NPs with a high percentage of (001) facets in formaldehyde solution undergo photochemical reactions to reconstruct the (101) surface of TiO2 and simultaneously allow polyformaldehyde to absorb on the same surface. Thus, Au(OH)-4 ions could be adsorbed on the (101) surfaces of TiO2 through electrostatic adsorption and reduced to form nano-Au in situ after recrystallization at 180 °C. The high-resolution transmission electron microscopy (HRTEM) images showed clear nanoscale lattice transition on heterogeneous interfaces of Au/TiO2 NPs. The surface structure of TiO2 NPs and the growth mechanism of Au/TiO2 NPs were evaluated with HRTEM, X-ray photoelectron spectra (XPS) and Fourier transform infrared spectroscopy (FTIR). It was demonstrated that the as-prepared plasmonic Au/TiO2 NPs had higher photocatalytic activity and corrosion resistance in comparison with primary TiO2 NPs by photo-electrochemical measurements. The reinforcing mechanism could be interpreted with Mott-Schottky analysis in terms of quantum mechanics. Our study implied that the reconstruction based synthesis may open up more opportunities to obtain lattice-mismatch nanomaterials for photocatalysis.

  20. DIEP Flap Breast Reconstruction in Patients with Breast Ptosis: 2-Stage Reconstruction Using 3-Dimensional Surface Imaging and a Printed Mold

    Directory of Open Access Journals (Sweden)

    Koichi Tomita, MD, PhD

    2017-10-01

    Conclusions:. The method described here may allow even inexperienced surgeons to achieve reconstruction of symmetrical, non-ptotic breasts with ease and in a short time. While the requirement of two surgeries is a potential disadvantage, our method will be particularly useful in cases involving TEs, i.e., delayed reconstruction or immediate reconstruction involving significant skin resection.

  1. Usefulness of ventricular endocardial electric reconstruction from body surface potential maps to noninvasively localize ventricular ectopic activity in patients

    Science.gov (United States)

    Lai, Dakun; Sun, Jian; Li, Yigang; He, Bin

    2013-06-01

    As radio frequency (RF) catheter ablation becomes increasingly prevalent in the management of ventricular arrhythmia in patients, an accurate and rapid determination of the arrhythmogenic site is of important clinical interest. The aim of this study was to test the hypothesis that the inversely reconstructed ventricular endocardial current density distribution from body surface potential maps (BSPMs) can localize the regions critical for maintenance of a ventricular ectopic activity. Patients with isolated and monomorphic premature ventricular contractions (PVCs) were investigated by noninvasive BSPMs and subsequent invasive catheter mapping and ablation. Equivalent current density (CD) reconstruction (CDR) during symptomatic PVCs was obtained on the endocardial ventricular surface in six patients (four men, two women, years 23-77), and the origin of the spontaneous ectopic activity was localized at the location of the maximum CD value. Compared with the last (successful) ablation site (LAS), the mean and standard deviation of localization error of the CDR approach were 13.8 and 1.3 mm, respectively. In comparison, the distance between the LASs and the estimated locations of an equivalent single moving dipole in the heart was 25.5 ± 5.5 mm. The obtained CD distribution of activated sources extending from the catheter ablation site also showed a high consistency with the invasively recorded electroanatomical maps. The noninvasively reconstructed endocardial CD distribution is suitable to predict a region of interest containing or close to arrhythmia source, which may have the potential to guide RF catheter ablation.

  2. Reconstruction Effects on Surface Properties of Co/Mg/Al Layered Double Hydroxide

    Directory of Open Access Journals (Sweden)

    Denis SOKOL

    2017-08-01

    Full Text Available Layered double hydroxides having different cationic (Mg2+, Co2+, Al3+ composition were successfully synthesized by the low supersaturation method. The samples were thermally decomposed and reconstructed using water and nitrate media at different temperatures. X-ray powder diffraction analysis, X-ray fluorescence analysis, thermogravimetry and BET/BJH methods were used to investigate the differences between the directly obtained layered materials and those after the reconstruction process.DOI: http://dx.doi.org/10.5755/j01.ms.23.2.15184

  3. Quantitative Assessment of Variational Surface Reconstruction from Sparse Point Clouds in Freehand 3D Ultrasound Imaging during Image-Guided Tumor Ablation

    Directory of Open Access Journals (Sweden)

    Shuangcheng Deng

    2016-04-01

    Full Text Available Surface reconstruction for freehand 3D ultrasound is used to provide 3D visualization of a VOI (volume of interest during image-guided tumor ablation surgery. This is a challenge because the recorded 2D B-scans are not only sparse but also non-parallel. To solve this issue, we established a framework to reconstruct the surface of freehand 3D ultrasound imaging in 2011. The key technique for surface reconstruction in that framework is based on variational interpolation presented by Greg Turk for shape transformation and is named Variational Surface Reconstruction (VSR. The main goal of this paper is to evaluate the quality of surface reconstructions, especially when the input data are extremely sparse point clouds from freehand 3D ultrasound imaging, using four methods: Ball Pivoting, Power Crust, Poisson, and VSR. Four experiments are conducted, and quantitative metrics, such as the Hausdorff distance, are introduced for quantitative assessment. The experiment results show that the performance of the proposed VSR method is the best of the four methods at reconstructing surface from sparse data. The VSR method can produce a close approximation to the original surface from as few as two contours, whereas the other three methods fail to do so. The experiment results also illustrate that the reproducibility of the VSR method is the best of the four methods.

  4. Modeling the Non-Equilibrium Process of the Chemical Adsorption of Ammonia on GaN(0001) Reconstructed Surfaces Based on Steepest-Entropy-Ascent Quantum Thermodynamics

    OpenAIRE

    Kusaba, Akira; Li, Guanchen; von Spakovsky, Michael R.; Kangawa, Yoshihiro; Kakimoto, Koichi

    2017-01-01

    Clearly understanding elementary growth processes that depend on surface reconstruction is essential to controlling vapor-phase epitaxy more precisely. In this study, ammonia chemical adsorption on GaN(0001) reconstructed surfaces under metalorganic vapor phase epitaxy (MOVPE) conditions (3Ga-H and Nad-H + Ga-H on a 2 × 2 unit cell) is investigated using steepest-entropy-ascent quantum thermodynamics (SEAQT). SEAQT is a thermodynamic-ensemble based, first-principles framework that can predict...

  5. Measuring the sizes of nanospheres on a rough surface by using atomic force microscopy and a curvature-reconstruction method

    International Nuclear Information System (INIS)

    Oikawa, Koudai; Kim, Hyonchol; Watanabe, Naoya; Shigeno, Masatsugu; Shirakawabe, Yoshiharu; Yasuda, Kenji

    2007-01-01

    One of the advantages of atomic force microscopy (AFM) is that it can accurately measure the heights of targets on flat substrates. It is difficult, however, to determine the shape of nanoparticles on rough surfaces. We therefore propose a curvature-reconstruction method that estimates the sizes of particles by fitting sphere curvatures acquired from raw AFM data. We evaluated this fitting estimation using 15-, 30-, and 50-nm gold nanoparticles on mica and confirmed that particle sizes could be estimated within 5% from 20% of their curvature measured using a carbon nanotube (CNT) tip. We also estimated the sizes of nanoparticles on the rough surface of dried cells and found we also can estimate the size of those particles within 5%, which is difficult when we only used the height information. The results indicate the size of nanoparticles even on rough surfaces can be measured by using our method and a CNT tip

  6. Three-dimensional reconstruction of brain surface anatomy: technique comparison between flash and diffusion-weighted imaging

    International Nuclear Information System (INIS)

    Sun Jianzhong; Wang Zhikang; Gong Xiangyang

    2006-01-01

    Objective: To compare two methods 3D flash and diffusion-weighted images (DWI) in reconstructing the brain surface anatomy, and to evaluate their displaying ability, advantages, limitations and clinical application. Methods: Thrity normal cases were prospectively examined with 3D flash sequence and echo-planar DWI. Three-dimensional images were acquired with volume-rendering on workstation. Brain surface structures were evaluated and scored by a group of doctors. Results: Main structures of brain surface were clearly displayed on three-dimensional images based on 3D flash sequence. Average scores were all above 2.50. For images based on DWI, precentral gyrus, postcentral gyrus, superior parietal lobule, superior frontal gyrus, precentral sulcus, central sulcus, postcentral sulcus, intraparietal sulcus and superior frontal sulcus were best shown with average scores between 2.60-2.75, However, supramarginal gyrus, angular gyrus, middle frontal gyrus, inferior frontal gyrus, superior temporal gyrus, lateral sulcus, inferior frontal sulcus could not be well shown, with average scores between 1.67-2.48. Middle temporal gyrus, inferior temporal gyrus, superior temporal sulcus and inferior temporal sulcus can only get scores from 0.88 to 1.27. Scores of images based on 3D flash were much higher than that based on DWI with distinct differentiations, P values were all below 0.01. Conclusion: Three-dimensional images based on 3D flash can really display brain surface structures. It is very useful for anatomic researches. Three-dimensional reconstruction of brain surface based on DWI is a worthy technique to display brain surface anatomy, especially for frontal and parietal structures. (authors)

  7. Drought reconstruction in eastern Hulun Buir steppe, China and its linkages to the sea surface temperatures in the Pacific Ocean

    Science.gov (United States)

    Liu, Na; Liu, Yu; Bao, Guang; Bao, Ming; Wang, Yanchao; Zhang, Lizhi; Ge, Yuxiang; Bao, Wurigen; Tian, Heng

    2016-01-01

    A tree-ring width chronology covering the period 1780-2013 AD was developed from Pinus sylvestris var. mongolica for the eastern Hulun Buir steppe, a region located on the edge of the eastern Mongolian Plateau, China. Climate-growth response analysis revealed drought stress to be the primary limiting factor for tree growth. Therefore, the mean February-July standardized precipitation evapotranspiration index (SPEI) was reconstructed over the period 1819-2013, where the reconstruction could account for 32.8% of the variance in the instrumental record over the calibration period 1953-2011. Comparison with other tree-ring-based moisture sequences from nearby areas confirmed a high degree of confidence in our reconstruction. Severe drought intervals since the late 1970s in our study area consisted with the weakening East Asian summer monsoon, which modulating regional moisture conditions in semi-arid zone over northern China. Drought variations in the study area significantly correlated with sea surface temperatures (SSTs) in North Pacific Ocean, suggesting a possible connection of regional hydroclimatic variations to the Pacific Decadal Oscillation (PDO). The potential influence associated with El Niño-Southern Oscillation (ENSO) was primarily analyzed.

  8. The modeling of quadratic B-splines surfaces for the tomographic reconstruction in the FCC- type-riser

    International Nuclear Information System (INIS)

    Vasconcelos, Geovane Vitor; Dantas, Carlos Costa; Melo, Silvio de Barros; Pires, Renan Ferraz

    2009-01-01

    The 3D tomography reconstruction has been a profitable alternative in the analysis of the FCC-type- riser (Fluid Catalytic Cracking), for appropriately keeping track of the sectional catalyst concentration distribution in the process of oil refining. The method of tomography reconstruction proposed by M. Azzi and colleagues (1991) uses a relatively small amount of trajectories (from 3 to 5) and projections (from 5 to 7) of gamma rays, a desirable feature in the industrial process tomography. Compared to more popular methods, such as the FBP (Filtered Back Projection), which demands a much higher amount of gamma rays projections, the method by Azzi et al. is more appropriate for the industrial process, where the physical limitations and the cost of the process require more economical arrangements. The use of few projections and trajectories facilitates the diagnosis in the flow dynamical process. This article proposes an improvement in the basis functions introduced by Azzi et al., through the use of quadratic B-splines functions. The use of B-splines functions makes possible a smoother surface reconstruction of the density distribution, since the functions are continuous and smooth. This work describes how the modeling can be done. (author)

  9. Surface-based reconstruction and diffusion MRI in the assessment of gray and white matter damage in multiple sclerosis

    Science.gov (United States)

    Caffini, Matteo; Bergsland, Niels; LaganÃ, Marcella; Tavazzi, Eleonora; Tortorella, Paola; Rovaris, Marco; Baselli, Giuseppe

    2014-03-01

    Despite advances in the application of nonconventional MRI techniques in furthering the understanding of multiple sclerosis pathogenic mechanisms, there are still many unanswered questions, such as the relationship between gray and white matter damage. We applied a combination of advanced surface-based reconstruction and diffusion tensor imaging techniques to address this issue. We found significant relationships between white matter tract integrity indices and corresponding cortical structures. Our results suggest a direct link between damage in white and gray matter and contribute to the notion of gray matter loss relating to clinical disability.

  10. Closed-loop surface-related multiple elimination and its application to simultaneous data reconstruction

    NARCIS (Netherlands)

    Lopez Angarita, G.A.; Verschuur, D.J.

    2015-01-01

    Surface-related multiple elimination (SRME) is one of the most commonly used methods for suppressing surface multiples. However, to obtain an accurate surface multiple estimation, dense source and receiver sampling is required. The traditional approach to this problem is performing data

  11. Clinical effect of vitamin A palmitate eye gel on early ocular surface reconstruction after thermal or chemical injuries

    Directory of Open Access Journals (Sweden)

    Fen-Dui Zhang

    2015-11-01

    Full Text Available AIM: To evaluate the clinical effect of vitamin A palmitate eye gel on early ocular surface reconstruction after thermal or chemical injuries. METHODS: Seventy-eight cases with thermal or chemical injuries to eyes were selected and divided into two groups by randomized, double-blind, positive drug parallel controlled method: group A(40 cases were treated with vitamin A palmitate eye geland group B \\〖38 cases were treated with basic fibroblast growth factor(bFGF\\〗. The bFGF and vitamin A palmitate eye gel were used 4 times a day. The treatment course was 14d. Restoration of epithelial defect, Schirmer's test values, tear break-up time(BUT, and subjective assessment of symptoms and signs were observed on D1, D3, D5, D7, D10 and D14.RESULTS: In group A, 31 cases were cured, 5 cases were effective, with the cure rate of 76% and efficiency 90%. In group B, 32 cases were cured, 3 cases were effective, with the cure rate of 84% and efficiency 92%. There were no significant differences between the two groups(P>0.05. However, there were significant differences on the results of Schirmer's test and BUT(PPCONCLUSION: Vitamin A palmitate eye gel is valuable and safe on early ocular surface reconstruction of the eyes suffered from thermal or chemical injuries.

  12. Reconstruction of Magnetic Field Surfaces of the NOVILLO Tokamak by means of the 3D-MAPTOR Code

    International Nuclear Information System (INIS)

    Chavez-Alarcon, Esteban; Herrera-Velazquez, J. Julio E.

    2008-01-01

    A 3-D code has been developed in order to simulate the magnetic field lines in circular cross-section tokamaks. The toroidal magnetic field can be obtained from the individual fields of circular coils arranged around the torus, or alternatively, as a ripple-less field, as well as the vertical field coils, and divertor-like coils. The poloidal field is provided by a given toroidal current density profile. Proposing initial conditions for a magnetic filed line, it is integrated along the toroidal angle coordinate, and the Poincare maps can be obtained at any desired cross section plane along the torus. Following this procedure, the code allows to explore the necessary current values for the existence of magnetic field surfaces, allowing for deviations from axial symmetry, such as ripple effects. Therefore it is a good design instrument, in which different parameters and arrangements of coils can be tested. On the other hand, the current signals from experimental devices can be used in order to reconstruct the behaviour of the magnetic field surfaces, including the q(r) profiles. The reconstruction properties of the code are shown in this work

  13. Postoperative assessment of surgical results using three dimensional surface reconstruction CT (3D-CT) in a craniofacial anomaly

    International Nuclear Information System (INIS)

    Nishimura, Jiro; Sato, Kaoru; Nishimoto, Hiroshi; Tsukiyama, Takashi; Fujioka, Mutsuhisa; Akagawa, Tetsuya.

    1988-01-01

    In 1983, Michael W. Vannier and Jeffrey L. Marsh developed a computer method that reconstructs three dimensional (3D) born and soft tissue surfaces, given a high resolution CT scan-series of the facial skeleton. This method has been applied to craniofacial anomalies, basal encephaloceles, and musculoskeletal anomalies. In this study, a postoperative assessment of the craniofacial surgical results has been accomplished using this 3D-CT in 2 children with craniofacial dysmorphism. The authors discuss the advantages of this 3D-CT imaging method in the postoperative assessments of craniofacial anomalies. Results are detailed in the following listing : 1) a postoperative 3D-CT reveals the anatomical details corrected by the craniofacial surgery more precisely and stereographically than conventional radiological methods ; 2) secondary changes of the cranium after the surgery, such as bony formation in the area of the osteotomy and postoperative asymmetric deformities, are detected early by the 3D-CT imaging technique, and, 3) 3D-CT mid-sagittal and top axial views of the intracranial skull base are most useful in postoperative assessments of the surgical results. Basesd on our experience, we expect that three dimensional surface reconstructions from CT scans will become to be used widely in the postoperative assessments of the surgical results of craniofacial anomalies. (author)

  14. Reconstructing surface elevation changes for the Greenland Ice Sheet (1993-2013) and analysis of Zachariae Isstrom, northeast Greenland

    Science.gov (United States)

    Duncan, Kyle

    Previous studies investigating the velocity and elevation change records of the Greenland Ice Sheet (GrIS) revealed rapid and complex changes. It is therefore imperative to determine changes with both high spatial and temporal resolutions. By fusing multiple laser altimetry data sets, the Surface Elevation Reconstruction and Change (SERAC) program is capable of reconstructing surface elevation changes with high spatial and temporal resolution over the entire GrIS. The input data include observations from NASA's Ice, Cloud and land Elevation Satellite (ICESat) mission (2003-2009) as well as data collected by NASA's Airborne Topographic Mapper (ATM) (1993-2013) and Land, Vegetation and Ice Sensor (LVIS) (2007-2012) airborne laser altimetry systems. This study extends the record of surface elevation changes over the GrIS by adding 2012 and 2013 laser altimetry data to the previous 1993-2011 record. Extending the record leads to a new, more accurate and detailed altimetry record for 1993-2013. Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Digital Elevation Models (DEMs) are fused with laser altimetry data over Zachariae Isstrom, northeast Greenland to analyze surface elevation changes and associated thinning rates during 1978-2014. Little to no elevation change occurred over Zachariae Isstrom from 1978-1999, however, from 1999-2014 elevation changes near the calving front became increasingly negative and accelerated. Calving front position showed steady retreat and grounding line position has been retreating towards the interior of the ice sheet at an increasing rate from 2010-2014 when compared to the 1996-2010 period. The measured elevation changes near the calving front have brought a large portion of the glacier close to the height of flotation. If the current thinning trend continues this portion of the glacier will reach flotation within the next 2-5 years allowing for further retreat and increased vulnerability to retreat for sections of

  15. Reconstructing sea surface temperature, sea surface salinity and partial pressure of carbon dioxide in atmosphere in the Okinawa Trough during the Holocene and their paleoclimatic implications

    Institute of Scientific and Technical Information of China (English)

    MENGXianwei; LIUYanguang; LlUZhenxia; DUDewen; HUANGQiyu; Y.Saito

    2003-01-01

    The sediment core DGKS9603 collected from the Okinawa Trough was used as research target. By use of unsaturated index U37k of long-chain alkenone, δ13C of POC and of planktonic foraminifera (G sacculifer), the evolutions of sea surface temperature and partial pressure of carbon dioxide in the atmosphere during the Holocene were reconstructed in the Okinawa Trough. And in combination of δ18O of planktonic foraminifera, the relative difference of sea surface salinity during the Holocene was also reconstructed.Consequently, three cooling events (E1-E3) were identified,each of which occurred at 1.7-1.6, 5.1-4.8 and 8.1-7.4kaBP (cal), respectively. Of the three events, E2 and E3 are globally comparable, their occurrence mechanism would be that the main stream of the Kuroshio Current shifted eastward due to the enhanced circulation of the northeastern Pacific Ocean, which was driven in turn by amplified intensity of sunshine and subsequent enhancement of subtropical high pressure; E1 corresponds to the Small Ice-Age Event occurring between 1550 and 1850AD in China. In the Okinawa Trough, E1 might be also related to the eastward shift of main stream of the Kuroshio current driven by powerful Asia winter monsoon.

  16. Reconstructing sea surface temperature, sea surface salinity and partial pressure of carbon dioxide in atmos- phere in the Okinawa Trough during the Holocene and their paleoclimatic implications

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    The sediment core DGKS9603 collected from the Okinawa Trough was used as research target. By use of unsaturated index of long-chain alkenone, δ13C of POC and of planktonic foraminifera (G. Sacculifer), the evolutions of sea surface temperature and partial pressure of carbon dioxide in the atmosphere during the Holocene were reconstructed in the Okinawa Trough. And in combination of δ18O of planktonic foraminifera, the relative difference of sea surface salinity during the Holocene was also reconstructed. Consequently, three cooling events (E1-E3) were identified, each of which occurred at 1.7-1.6, 5.1-4.8 and 8.1-7.4 kaBP (cal), respectively. Of the three events, E2 and E3 are globally comparable, their occurrence mechanism would be that the main stream of the Kuroshio Current shifted eastward due to the enhanced circulation of the northeastern Pacific Ocean, which was driven in turn by amplified intensity of sunshine and subsequent enhancement of subtropical high pressure; E1 corresponds to the Small Ice-Age Event occurring between 1550 and 1850AD in China. In the Okinawa Trough, E1 might be also related to the eastward shift of main stream of the Kuroshio current driven by powerful Asia winter monsoon.

  17. A Facile Surface Reconstruction Mechanism toward Better Electrochemical Performance of Li

    NARCIS (Netherlands)

    Qian, Kun; Tang, Linkai; Wagemaker, M.; He, Yan Bing; Liu, Dongqing; Li, Hai; Shi, Ruiying; Li, Baohua; Kang, Feiyu

    2017-01-01

    Through a facile sodium sulfide (Na2S)-assisted hydrothermal treatment, clean and nondefective surfaces are constructed on micrometer-sized Li4Ti5O12 particles. The remarkable improvement of surface quality shows a higher first cycle Coulombic

  18. Surface structural reconstruction of SrVO3 thin films on SrTiO3 (001)

    Science.gov (United States)

    Wang, Gaomin; Saghayezhian, Mohammad; Chen, Lina; Guo, Hangwen; Zhang, Jiandi

    Paramagnetic metallic oxide SrVO3>(SVO) is an itinerant system known to undergo thickness-induced metal-insulator-transition (MIT) in ultrathin film form, which makes it a prototype system for the study of the mechanism behind metal-insulator-transition like structure distortion, electron correlations and disorder-induced localization. We have grown SrVO3 thin film with atomically flat surface through the layer-by-layer deposition by laser Molecular Beam Epitaxy (laser-MBE) on SrTiO3 (001) surface. Low Energy Electron Diffraction (LEED) measurements reveal that there is a (√2X √2) R45°surface reconstruction independent of film thickness. By using LEED-I(V) structure refinement, we determine the surface structure. In combination with X-ray Photoelectron Spectroscopy (XPS) and Scanning Tunneling Microscopy (STM), we discuss the implication on the MIT in ultrathin films below 2-3 unit cell thickness. This work is supported by the National Science Foundation under the NSF EPSCoR Cooperative Agreement No. EPS-1003897 with additional support from the Louisiana Board of Regents.

  19. Surfactant-induced layered growth in homoepitaxy of Fe on Fe(100)-c(2 x 2)O reconstruction surface

    International Nuclear Information System (INIS)

    Kamiko, Masao; Mizuno, Hiroyuki; Chihaya, Hiroaki; Xu, Junhua; Kojima, Isao; Yamamoto, Ryoichi

    2007-01-01

    In this study, the effects of several surfactants (Pb, Bi, and Ag) on the homoepitaxial growth of Fe(100) were studied and compared. The reflection high-energy electron diffraction measurements clearly reveal that these surfactants enhance the layer-by-layer growth of Fe on an Fe(100)-c(2 x 2)O reconstruction surface. The dependence of growth on the surfactant layer thickness suggests that there exists a suitable amount of surfactant layer that induces a smoother layer-by-layer growth. Comparisons between the atomic force microscopy images reveal that the root-mean-square surface roughness of Fe films mediated by Pb and Bi surfactants are considerably smaller than those of the films mediated by Ag surfactant. The Auger electron spectra show that Pb and Bi segregate at the top of the surface. It has been concluded that Pb and Bi are effective surfactants for enhancing layer-by-layer growth in Fe homoepitaxy. Ag has the same effect, but it is less efficient due to the weak surface segregation of Ag

  20. Reconstruction of the sea surface elevation from the analysis of the data collected by a wave radar system

    Science.gov (United States)

    Ludeno, Giovanni; Soldovieri, Francesco; Serafino, Francesco; Lugni, Claudio; Fucile, Fabio; Bulian, Gabriele

    2016-04-01

    X-band radar system is able to provide information about direction and intensity of the sea surface currents and dominant waves in a range of few kilometers from the observation point (up to 3 nautical miles). This capability, together with their flexibility and low cost, makes these devices useful tools for the sea monitoring either coastal or off-shore area. The data collected from wave radar system can be analyzed by using the inversion strategy presented in [1,2] to obtain the estimation of the following sea parameters: peak wave direction; peak period; peak wavelength; significant wave height; sea surface current and bathymetry. The estimation of the significant wave height represents a limitation of the wave radar system because of the radar backscatter is not directly related to the sea surface elevation. In fact, in the last period, substantial research has been carried out to estimate significant wave height from radar images either with or without calibration using in-situ measurements. In this work, we will present two alternative approaches for the reconstruction of the sea surface elevation from wave radar images. In particular, the first approach is based on the basis of an approximated version of the modulation transfer function (MTF) tuned from a series of numerical simulation, following the line of[3]. The second approach is based on the inversion of radar images using a direct regularised least square technique. Assuming a linearised model for the tilt modulation, the sea elevation has been reconstructed as a least square fitting of the radar imaging data[4]. References [1]F. Serafino, C. Lugni, and F. Soldovieri, "A novel strategy for the surface current determination from marine X-band radar data," IEEE Geosci.Remote Sens. Lett., vol. 7, no. 2, pp. 231-235, Apr. 2010. [2]Ludeno, G., Brandini, C., Lugni, C., Arturi, D., Natale, A., Soldovieri, F., Serafino, F. (2014). Remocean System for the Detection of the Reflected Waves from the Costa

  1. ECONOMIC INDICATORS OF ROAD SURFACES RECONSTRUCTIONS IN THE WORLD USING NON-WASTE TECHNOLOGY

    Directory of Open Access Journals (Sweden)

    Dilyara Kyazymovna Izmaylova

    2017-05-01

    Full Text Available The article describes the cost formation of restoration of road surfaces using the methods of replacing and processing the damaged layers. There is a mathematical model of cost of the one unit of production including the cost of building materials with delivery. The estimation of the total cost of repairs in the variable amount using the technology of full replacement of the surface and processing technology of the 50% of the material on the site.

  2. Diffusion and adsorption of dimers on reconstructed Pt(1 1 0) surfaces: First principle and EAM studies

    Science.gov (United States)

    Matrane, I.; Mazroui, M.; Sbiaai, K.

    2018-03-01

    We present a density functional theory (DFT) and embedded atom method (EAM) studies of Pt2 , Au2 and AuPt dimers adsorption and diffusion on the clean Pt (1 1 0) (1 × 1) surface and (1 × 2) (1 × 3) and (1 × 4) missing row reconstructed geometries. As a first step, adsorption energies are calculated for all considered dimers, and their stability is checked by computing the binding energies. Furthermore, the energy barriers for the elementary diffusion mechanisms (concerted jump, dissociation-reassociation and leapfrog) are calculated for dimers diffusion on all considered geometries. The potential energy profile for the leapfrog mechanism is provided for dimers diffusion on the (1 × 2) (1 × 3) and (1 × 4) missing row reconstructed geometries. Our results show that each of the three dimers exhibits a qualitatively different behaviours. In addition, the obtained results provide interesting atomistic information about dimers stability and mobility, which is required for understanding the macroscopic kinetics of crystal growth.

  3. The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction.

    Science.gov (United States)

    Makropoulos, Antonios; Robinson, Emma C; Schuh, Andreas; Wright, Robert; Fitzgibbon, Sean; Bozek, Jelena; Counsell, Serena J; Steinweg, Johannes; Vecchiato, Katy; Passerat-Palmbach, Jonathan; Lenz, Gregor; Mortari, Filippo; Tenev, Tencho; Duff, Eugene P; Bastiani, Matteo; Cordero-Grande, Lucilio; Hughes, Emer; Tusor, Nora; Tournier, Jacques-Donald; Hutter, Jana; Price, Anthony N; Teixeira, Rui Pedro A G; Murgasova, Maria; Victor, Suresh; Kelly, Christopher; Rutherford, Mary A; Smith, Stephen M; Edwards, A David; Hajnal, Joseph V; Jenkinson, Mark; Rueckert, Daniel

    2018-06-01

    The Developing Human Connectome Project (dHCP) seeks to create the first 4-dimensional connectome of early life. Understanding this connectome in detail may provide insights into normal as well as abnormal patterns of brain development. Following established best practices adopted by the WU-MINN Human Connectome Project (HCP), and pioneered by FreeSurfer, the project utilises cortical surface-based processing pipelines. In this paper, we propose a fully automated processing pipeline for the structural Magnetic Resonance Imaging (MRI) of the developing neonatal brain. This proposed pipeline consists of a refined framework for cortical and sub-cortical volume segmentation, cortical surface extraction, and cortical surface inflation, which has been specifically designed to address considerable differences between adult and neonatal brains, as imaged using MRI. Using the proposed pipeline our results demonstrate that images collected from 465 subjects ranging from 28 to 45 weeks post-menstrual age (PMA) can be processed fully automatically; generating cortical surface models that are topologically correct, and correspond well with manual evaluations of tissue boundaries in 85% of cases. Results improve on state-of-the-art neonatal tissue segmentation models and significant errors were found in only 2% of cases, where these corresponded to subjects with high motion. Downstream, these surfaces will enhance comparisons of functional and diffusion MRI datasets, supporting the modelling of emerging patterns of brain connectivity. Copyright © 2018 Elsevier Inc. All rights reserved.

  4. Reconstruction of deglacial sea surface temperature in the tropical Pacific from selective analysis of a fossil coral

    Energy Technology Data Exchange (ETDEWEB)

    Allison, N.; Finch, A.A.; Tudhope, A.W.; Newville, M.; Sutton, S.R.; Ellam, R.M. (St Andrews); (Edinburgh); (Scottish); (UC); (St Andrews)

    2010-07-13

    The Sr/Ca of coral skeletons demonstrates potential as an indicator of sea surface temperatures (SSTs). However, the glacial-interglacial SST ranges predicted from Sr/Ca of fossil corals are usually higher than from other marine proxies. We observed infilling of secondary aragonite, characterized by high Sr/Ca ratios, along intraskeletal pores of a fossil coral from Papua New Guinea that grew during the penultimate deglaciation (130 {+-} 2 ka). Selective microanalysis of unaltered areas of the fossil coral indicates that SSTs at {approx}130 ka were {le} 1 C cooler than at present in contrast with bulk measurements (combining infilled and unaltered areas) which indicate a difference of 6-7 C. The analysis of unaltered areas of fossil skeletons by microprobe techniques may offer a route to more accurate reconstruction of past SSTs.

  5. Section curve reconstruction and mean-camber curve extraction of a point-sampled blade surface.

    Directory of Open Access Journals (Sweden)

    Wen-long Li

    Full Text Available The blade is one of the most critical parts of an aviation engine, and a small change in the blade geometry may significantly affect the dynamics performance of the aviation engine. Rapid advancements in 3D scanning techniques have enabled the inspection of the blade shape using a dense and accurate point cloud. This paper proposes a new method to achieving two common tasks in blade inspection: section curve reconstruction and mean-camber curve extraction with the representation of a point cloud. The mathematical morphology is expanded and applied to restrain the effect of the measuring defects and generate an ordered sequence of 2D measured points in the section plane. Then, the energy and distance are minimized to iteratively smoothen the measured points, approximate the section curve and extract the mean-camber curve. In addition, a turbine blade is machined and scanned to observe the curvature variation, energy variation and approximation error, which demonstrates the availability of the proposed method. The proposed method is simple to implement and can be applied in aviation casting-blade finish inspection, large forging-blade allowance inspection and visual-guided robot grinding localization.

  6. Correlation between average tissue depth data and quantitative accuracy of forensic craniofacial reconstructions measured by geometric surface comparison method.

    Science.gov (United States)

    Lee, Won-Joon; Wilkinson, Caroline M; Hwang, Hyeon-Shik; Lee, Sang-Mi

    2015-05-01

    Accuracy is the most important factor supporting the reliability of forensic facial reconstruction (FFR) comparing to the corresponding actual face. A number of methods have been employed to evaluate objective accuracy of FFR. Recently, it has been attempted that the degree of resemblance between computer-generated FFR and actual face is measured by geometric surface comparison method. In this study, three FFRs were produced employing live adult Korean subjects and three-dimensional computerized modeling software. The deviations of the facial surfaces between the FFR and the head scan CT of the corresponding subject were analyzed in reverse modeling software. The results were compared with those from a previous study which applied the same methodology as this study except average facial soft tissue depth dataset. Three FFRs of this study that applied updated dataset demonstrated lesser deviation errors between the facial surfaces of the FFR and corresponding subject than those from the previous study. The results proposed that appropriate average tissue depth data are important to increase quantitative accuracy of FFR. © 2015 American Academy of Forensic Sciences.

  7. In situ monitoring of the surface reconstructions on InP(001) prepared by molecular beam epitaxy

    Science.gov (United States)

    Ozanyan, K. B.; Parbrook, P. J.; Hopkinson, M.; Whitehouse, C. R.; Sobiesierski, Z.; Westwood, D. I.

    1997-07-01

    Reflection anisotropy spectroscopy (RAS) and reflection high-energy electron diffraction (RHEED) were applied to study clean InP(001) surfaces prepared by molecular beam epitaxy (MBE). At phosphorus beam equivalent pressures (BEPs) between 3.5×10-7 and 3.5×10-6 mbar and substrate temperature (Ts) falling from 590 to 150 °C, (2×4), (2×1), (2×2), and c(4×4) RHEED patterns are observed. The main RAS features, observed at 1.7-1.9 and 2.6-2.9 eV are assigned to In and P dimers, respectively. The above reconstruction sequence is associated closely with transformations identified in RAS signatures that are induced by progressively increasing the P surface coverage. The RAS results also imply the existence of (2×4)α and (2×4)β phases. A surface-phase diagram for MBE-grown (001) InP, in the whole range of Ts and phosphorus BEPs is proposed.

  8. Amniotic membrane transplantation for reconstruction of corneal epithelial surface in cases of partial limbal stem cell deficiency.

    Directory of Open Access Journals (Sweden)

    Sangwan Virender

    2004-01-01

    Full Text Available Purpose: To assess the efficacy of amniotic membrane for treatment of partial limbal stem cell deficiency (LSCD. Methods: Medical records of four patients with partial LSCD who underwent pannus resection and amniotic membrane transplantation (AMT were reviewed for ocular surface stability and improvement in visual acuity. Clinico-histopathological correlation was done with the resected pannus tissue. Results: All the eyes exhibited stable corneal epithelial surface by an average of 7 weeks postoperatively with improvement in subjective symptoms. Best corrected visual acuity improved from preoperative (range: 6/9p-6/120 to postoperative (range: 6/6p-6/15 by an average of 4.5 lines on Snellen visual acuity charts. Histopathological examination of excised tissue showed features of conjunctivalisation. Conclusion: Amniotic membrane transplantation appears to be an effective means of reconstructing the corneal epithelial surface and for visual rehabilitation of patients with partial limbal stem cell deficiency. It may be considered as an alternative primary procedure to limbal transplantation in these cases.

  9. Facial recognition software success rates for the identification of 3D surface reconstructed facial images: implications for patient privacy and security.

    Science.gov (United States)

    Mazura, Jan C; Juluru, Krishna; Chen, Joseph J; Morgan, Tara A; John, Majnu; Siegel, Eliot L

    2012-06-01

    Image de-identification has focused on the removal of textual protected health information (PHI). Surface reconstructions of the face have the potential to reveal a subject's identity even when textual PHI is absent. This study assessed the ability of a computer application to match research subjects' 3D facial reconstructions with conventional photographs of their face. In a prospective study, 29 subjects underwent CT scans of the head and had frontal digital photographs of their face taken. Facial reconstructions of each CT dataset were generated on a 3D workstation. In phase 1, photographs of the 29 subjects undergoing CT scans were added to a digital directory and tested for recognition using facial recognition software. In phases 2-4, additional photographs were added in groups of 50 to increase the pool of possible matches and the test for recognition was repeated. As an internal control, photographs of all subjects were tested for recognition against an identical photograph. Of 3D reconstructions, 27.5% were matched correctly to corresponding photographs (95% upper CL, 40.1%). All study subject photographs were matched correctly to identical photographs (95% lower CL, 88.6%). Of 3D reconstructions, 96.6% were recognized simply as a face by the software (95% lower CL, 83.5%). Facial recognition software has the potential to recognize features on 3D CT surface reconstructions and match these with photographs, with implications for PHI.

  10. (Tl, Sb) and (Tl, Bi) binary surface reconstructions on Ge(111) substrate

    Science.gov (United States)

    Gruznev, D. V.; Bondarenko, L. V.; Tupchaya, A. Y.; Yakovlev, A. A.; Mihalyuk, A. N.; Zotov, A. V.; Saranin, A. A.

    2018-03-01

    2D compounds made of Group-III and Group-V elements on the surface of silicon and germanium attract considerable attention due to prospects of creating III-V binary monolayers, which are predicted to hold advanced physical properties. In the present work, we have investigated two such systems, (Tl, Sb)/Ge(111) and (Tl, Bi)/Ge(111) using scanning tunneling microscopy, low energy electron diffraction observations and density-functional-theory calculations. In addition to the previously reported surface structures of 2D (Tl, Sb) and (Tl, Bi) compounds on Si(111), we found new ones, namely, √{ 7} × √{ 7} and 3 × 3. Formation processes and plausible models of their atomic arrangements are discussed.

  11. Reconstructing surface ocean circulation with 129I time series records from corals.

    Science.gov (United States)

    Chang, Ching-Chih; Burr, George S; Jull, A J Timothy; Russell, Joellen L; Biddulph, Dana; White, Lara; Prouty, Nancy G; Chen, Yue-Gau; Shen, Chuan-Chou; Zhou, Weijian; Lam, Doan Dinh

    2016-12-01

    The long-lived radionuclide 129 I (half-life: 15.7 × 10 6  yr) is well-known as a useful environmental tracer. At present, the global 129 I in surface water is about 1-2 orders of magnitude higher than pre-1960 levels. Since the 1990s, anthropogenic 129 I produced from industrial nuclear fuels reprocessing plants has been the primary source of 129 I in marine surface waters of the Atlantic and around the globe. Here we present four coral 129 I time series records from: 1) Con Dao and 2) Xisha Islands, the South China Sea, 3) Rabaul, Papua New Guinea and 4) Guam. The Con Dao coral 129 I record features a sudden increase in 129 I in 1959. The Xisha coral shows similar peak values for 129 I as the Con Dao coral, punctuated by distinct low values, likely due to the upwelling in the central South China Sea. The Rabaul coral features much more gradual 129 I increases in the 1970s, similar to a published record from the Solomon Islands. The Guam coral 129 I record contains the largest measured values for any site, with two large peaks, in 1955 and 1959. Nuclear weapons testing was the primary 129 I source in the Western Pacific in the latter part of the 20th Century, notably from testing in the Marshall Islands. The Guam 1955 peak and Con Dao 1959 increases are likely from the 1954 Castle Bravo test, and the Operation Hardtack I test is the most likely source of the 1959 peak observed at Guam. Radiogenic iodine found in coral was carried primarily through surface ocean currents. The coral 129 I time series data provide a broad picture of the surface distribution and depth penetration of 129 I in the Pacific Ocean over the past 60 years. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

  12. Quantum oscillations and nodal pockets from Fermi surface reconstruction in the underdoped cuprates

    Science.gov (United States)

    Harrison, Neil

    2012-02-01

    Fermiology in the underdoped high Tc cuprates presents us with unique challenges, requiring experimentalists to look deeper into the data than is normally required for clues. Recent measurements of an oscillatory chemical potential affecting the oscillations at high magnetic fields provide a strong indication of a single type of carrier pocket. When considered in conjunction with photoemission and specific heat measurements, a Fermi surface comprised almost entirely of nodal pockets is suggested. The mystery of the Fermi surface is deepened, however, by a near doping-independent Fermi surface cross-sectional area and negative Hall and Seebeck coefficients. We explore ways in which these findings can be reconciled, taking an important hint from the diverging effective mass yielded by quantum oscillations at low dopings. The author wishes to thank Suchitra Sebastian, Moaz Atarawneh, Doug Bonn, Walter Hardy, Ruixing Liang, Charles Mielke and Gilbert Lonzarich who have contributed to this work. The work is supported by the NSF through the NHMFL and by the DOE project ``Science at 100 tesla.''

  13. Cultivated Oral Mucosa Epithelium in Ocular Surface Reconstruction in Aniridia Patients

    Directory of Open Access Journals (Sweden)

    Dariusz Dobrowolski

    2015-01-01

    Full Text Available Purpose. Efficacy of cultivated oral mucosa epithelial transplantation (COMET procedure in corneal epithelium restoration of aniridia patients. Methods. Study subjects were aniridia patients (13 patients; 17 eyes with irregular, vascular conjunctival pannus involving visual axis who underwent autologous transplantation of cultivated epithelium. For the procedure oral mucosa epithelial cells were obtained from buccal mucosa with further enzymatic treatment. Suspension of single cells was seeded on previously prepared denuded amniotic membrane. Cultures were carried on culture dishes inserts in the presence of the inactivated with Mitomycin C monolayer of 3T3 fibroblasts. Cultures were carried for seven days. Stratified oral mucosa epithelium with its amniotic membrane carrier was transplanted on the surgically denuded corneal surface of aniridia patients with total or subtotal limbal stem cell deficiency. Outcome Measures. Corneal surface, epithelial regularity, and visual acuity improvement were evaluated. Results. At the end of the observation period, 76.4% of the eyes had regular transparent epithelium and 23.5% had developed epithelial defects or central corneal haze; in 88.2% of cases visual acuity had increased. VA range was from HM 0.05 before the surgery to HM up to 0.1 after surgery. Conclusion. Application of cultivated oral mucosa epithelium restores regular epithelium on the corneal surface with moderate improvement in quality of vision.

  14. Reconstruction of sub-surface archaeological remains from magnetic data using neural computing.

    Science.gov (United States)

    Bescoby, D. J.; Cawley, G. C.; Chroston, P. N.

    2003-04-01

    The remains of a former Roman colonial settlement, once part of the classical city of Butrint in southern Albania have been the subject of a high resolution magnetic survey using a caesium-vapour magnetometer. The survey revealed the surviving remains of an extensive planned settlement and a number of outlying buildings, today buried beneath over 0.5 m of alluvial deposits. The aim of the current research is to derive a sub-surface model from the magnetic survey measurements, allowing an enhanced archaeological interpretation of the data. Neural computing techniques are used to perform the non-linear mapping between magnetic data and corresponding sub-surface model parameters. The adoption of neural computing paradigms potentially holds several advantages over other modelling techniques, allowing fast solutions for complex data, while having a high tolerance to noise. A multi-layer perceptron network with a feed-forward architecture is trained to estimate the shape and burial depth of wall foundations using a series of representative models as training data. Parameters used to forward model the training data sets are derived from a number of trial trench excavations targeted over features identified by the magnetic survey. The training of the network was optimized by first applying it to synthetic test data of known source parameters. Pre-processing of the network input data, including the use of a rotationally invariant transform, enhanced network performance and the efficiency of the training data. The approach provides good results when applied to real magnetic data, accurately predicting the depths and layout of wall foundations within the former settlement, verified by subsequent excavation. The resulting sub-surface model is derived from the averaged outputs of a ‘committee’ of five networks, trained with individualized training sets. Fuzzy logic inference has also been used to combine individual network outputs through correlation with data from a second

  15. Precision 3d Surface Reconstruction from Lro Nac Images Using Semi-Global Matching with Coupled Epipolar Rectification

    Science.gov (United States)

    Hu, H.; Wu, B.

    2017-07-01

    The Narrow-Angle Camera (NAC) on board the Lunar Reconnaissance Orbiter (LRO) comprises of a pair of closely attached high-resolution push-broom sensors, in order to improve the swath coverage. However, the two image sensors do not share the same lenses and cannot be modelled geometrically using a single physical model. Thus, previous works on dense matching of stereo pairs of NAC images would generally create two to four stereo models, each with an irregular and overlapping region of varying size. Semi-Global Matching (SGM) is a well-known dense matching method and has been widely used for image-based 3D surface reconstruction. SGM is a global matching algorithm relying on global inference in a larger context rather than individual pixels to establish stable correspondences. The stereo configuration of LRO NAC images causes severe problem for image matching methods such as SGM, which emphasizes global matching strategy. Aiming at using SGM for image matching of LRO NAC stereo pairs for precision 3D surface reconstruction, this paper presents a coupled epipolar rectification methods for LRO NAC stereo images, which merges the image pair in the disparity space and in this way, only one stereo model will be estimated. For a stereo pair (four) of NAC images, the method starts with the boresight calibration by finding correspondence in the small overlapping stripe between each pair of NAC images and bundle adjustment of the stereo pair, in order to clean the vertical disparities. Then, the dominate direction of the images are estimated by project the center of the coverage area to the reference image and back-projected to the bounding box plane determined by the image orientation parameters iteratively. The dominate direction will determine an affine model, by which the pair of NAC images are warped onto the object space with a given ground resolution and in the meantime, a mask is produced indicating the owner of each pixel. SGM is then used to generate a disparity

  16. PRECISION 3D SURFACE RECONSTRUCTION FROM LRO NAC IMAGES USING SEMI-GLOBAL MATCHING WITH COUPLED EPIPOLAR RECTIFICATION

    Directory of Open Access Journals (Sweden)

    H. Hu

    2017-07-01

    Full Text Available The Narrow-Angle Camera (NAC on board the Lunar Reconnaissance Orbiter (LRO comprises of a pair of closely attached high-resolution push-broom sensors, in order to improve the swath coverage. However, the two image sensors do not share the same lenses and cannot be modelled geometrically using a single physical model. Thus, previous works on dense matching of stereo pairs of NAC images would generally create two to four stereo models, each with an irregular and overlapping region of varying size. Semi-Global Matching (SGM is a well-known dense matching method and has been widely used for image-based 3D surface reconstruction. SGM is a global matching algorithm relying on global inference in a larger context rather than individual pixels to establish stable correspondences. The stereo configuration of LRO NAC images causes severe problem for image matching methods such as SGM, which emphasizes global matching strategy. Aiming at using SGM for image matching of LRO NAC stereo pairs for precision 3D surface reconstruction, this paper presents a coupled epipolar rectification methods for LRO NAC stereo images, which merges the image pair in the disparity space and in this way, only one stereo model will be estimated. For a stereo pair (four of NAC images, the method starts with the boresight calibration by finding correspondence in the small overlapping stripe between each pair of NAC images and bundle adjustment of the stereo pair, in order to clean the vertical disparities. Then, the dominate direction of the images are estimated by project the center of the coverage area to the reference image and back-projected to the bounding box plane determined by the image orientation parameters iteratively. The dominate direction will determine an affine model, by which the pair of NAC images are warped onto the object space with a given ground resolution and in the meantime, a mask is produced indicating the owner of each pixel. SGM is then used to

  17. Reconstruction of limbal stem cell deficient corneal surface with induced human bone marrow mesenchymal stem cells on amniotic membrane.

    Science.gov (United States)

    Rohaina, Che Man; Then, Kong Yong; Ng, Angela Min Hwei; Wan Abdul Halim, Wan Haslina; Zahidin, Aida Zairani Mohd; Saim, Aminuddin; Idrus, Ruszymah B H

    2014-03-01

    The cornea can be damaged by a variety of clinical disorders or chemical, mechanical, and thermal injuries. The objectives of this study were to induce bone marrow mesenchymal stem cells (BMSCs) to corneal lineage, to form a tissue engineered corneal substitute (TEC) using BMSCs, and to treat corneal surface defects in a limbal stem cell deficiency model. BMSCs were induced to corneal lineage using limbal medium for 10 days. Induced BMSCs demonstrated upregulation of corneal stem cell markers; β1-integrin, C/EBPδ, ABCG2, and p63, increased protein expression of CK3 and p63 significantly compared with the uninduced ones. For TEC formation, passage 1 BMSCs were trypsinized and seeded on amniotic membrane in a transwell co-culture system and were grown in limbal medium. Limbal stem cell deficiency models were induced by alkaline injury, and the TEC was implanted for 8 weeks. Serial slit lamp evaluation revealed remarkable improvement in corneal regeneration in terms of corneal clarity and reduced vascularization. Histologic and optical coherence tomography analyses demonstrated comparable corneal thickness and achieved stratified epithelium with a compact stromal layer resembling that of normal cornea. CK3 and p63 were expressed in the newly regenerated cornea. In conclusion, BMSCs can be induced into corneal epithelial lineage, and these cells are viable for the formation of TEC, to be used for the reconstruction of the corneal surface in the limbal stem cell deficient model. Copyright © 2014 Mosby, Inc. All rights reserved.

  18. Epitaxy of GaN on silicon-impact of symmetry and surface reconstruction

    International Nuclear Information System (INIS)

    Dadgar, A; Schulze, F; Wienecke, M; Gadanecz, A; Blaesing, J; Veit, P; Hempel, T; Diez, A; Christen, J; Krost, A

    2007-01-01

    GaN-on-silicon is a low-cost alternative to growth on sapphire or SiC. Today epitaxial growth is usually performed on Si(111), which has a threefold symmetry. The growth of single crystalline GaN on Si(001), the material of the complementary metal oxide semiconductor (CMOS) industry, is more difficult due to the fourfold symmetry of this Si surface leading to two differently aligned domains. We show that breaking the symmetry to achieve single crystalline growth can be performed, e.g. by off-oriented substrates to achieve single crystalline device quality GaN layers. Furthermore, an exotic Si orientation for GaN growth is Si(110), which we show is even better suited as compared to Si(111) for the growth of high quality GaN-on-silicon with a nearly threefold reduction in the full width at half maximum (FWHM) of the (1 1-bar 0 0)ω-scan. It is found that a twofold surface symmetry is in principal suitable for the growth of single crystalline GaN on Si

  19. Artificial Neural Networks to reconstruct incomplete satellite data: application to the Mediterranean Sea Surface Temperature

    Directory of Open Access Journals (Sweden)

    E. Pisoni

    2008-02-01

    Full Text Available Satellite data can be very useful in applications where extensive spatial information is needed, but sometimes missing data due to presence of clouds can affect data quality. In this study a methodology for pre-processing sea surface temperature (SST data is proposed. The methodology, that processes measures in the visible wavelength, is based on an Artificial Neural Network (ANN system. The effectiveness of the procedure has been also evaluated comparing results obtained using an interpolation method. After the methodology has been identified, a validation is performed on 3 different episodes representative of SST variability in the Mediterranean sea. The proposed technique can process SST NOAA/AVHRR data to simulate severe storm episodes by means of prognostic meteorological models.

  20. Reconstructing solar magnetic fields from historical observations: Testing the surface flux transport model

    Science.gov (United States)

    Virtanen, Iiro; Virtanen, Ilpo; Pevtsov, Alexei; Yeates, Anthony; Mursula, Kalevi

    2017-04-01

    We aim to use the surface flux transport model to simulate the long-term evolution of the photospheric magnetic field from historical observations. In this work we study the accuracy of the model and its sensitivity to uncertainties in its main parameters and the input data. We test the model by running simulations with different values of meridional circulation and supergranular diffusion parameters, and study how the flux distribution inside active regions and the initial magnetic field affect the simulation. We compare the results to assess how sensitive the simulation is to uncertainties in meridional circulation speed, supergranular diffusion and input data. We also compare the simulated magnetic field with observations. We find that there is generally good agreement between simulations and observations. While the model is not capable of replicating fine details of the magnetic field, the long-term evolution of the polar field is very similar in simulations and observations. Simulations typically yield a smoother evolution of polar fields than observations, that often include artificial variations due to observational limitations. We also find that the simulated field is fairly insensitive to uncertainties in model parameters or the input data. Due to the decay term included in the model the effects of the uncertainties are rather minor or temporary, lasting typically one solar cycle.

  1. Graph-based surface reconstruction from stereo pairs using image segmentation

    Science.gov (United States)

    Bleyer, Michael; Gelautz, Margrit

    2005-01-01

    This paper describes a novel stereo matching algorithm for epipolar rectified images. The method applies colour segmentation on the reference image. The use of segmentation makes the algorithm capable of handling large untextured regions, estimating precise depth boundaries and propagating disparity information to occluded regions, which are challenging tasks for conventional stereo methods. We model disparity inside a segment by a planar equation. Initial disparity segments are clustered to form a set of disparity layers, which are planar surfaces that are likely to occur in the scene. Assignments of segments to disparity layers are then derived by minimization of a global cost function via a robust optimization technique that employs graph cuts. The cost function is defined on the pixel level, as well as on the segment level. While the pixel level measures the data similarity based on the current disparity map and detects occlusions symmetrically in both views, the segment level propagates the segmentation information and incorporates a smoothness term. New planar models are then generated based on the disparity layers' spatial extents. Results obtained for benchmark and self-recorded image pairs indicate that the proposed method is able to compete with the best-performing state-of-the-art algorithms.

  2. Reconstructing solar magnetic fields from historical observations. II. Testing the surface flux transport model

    Science.gov (United States)

    Virtanen, I. O. I.; Virtanen, I. I.; Pevtsov, A. A.; Yeates, A.; Mursula, K.

    2017-07-01

    Aims: We aim to use the surface flux transport model to simulate the long-term evolution of the photospheric magnetic field from historical observations. In this work we study the accuracy of the model and its sensitivity to uncertainties in its main parameters and the input data. Methods: We tested the model by running simulations with different values of meridional circulation and supergranular diffusion parameters, and studied how the flux distribution inside active regions and the initial magnetic field affected the simulation. We compared the results to assess how sensitive the simulation is to uncertainties in meridional circulation speed, supergranular diffusion, and input data. We also compared the simulated magnetic field with observations. Results: We find that there is generally good agreement between simulations and observations. Although the model is not capable of replicating fine details of the magnetic field, the long-term evolution of the polar field is very similar in simulations and observations. Simulations typically yield a smoother evolution of polar fields than observations, which often include artificial variations due to observational limitations. We also find that the simulated field is fairly insensitive to uncertainties in model parameters or the input data. Due to the decay term included in the model the effects of the uncertainties are somewhat minor or temporary, lasting typically one solar cycle.

  3. Reconstruction of surface morphology from coherent scattering of ''white'' synchrotron radiation in hard X-ray regime

    Energy Technology Data Exchange (ETDEWEB)

    Sant, Tushar

    2009-07-01

    Energy Dispersive Reflectometry (EDR) beamline at BESSY II provides ''white'' X-rays in the useful energy range of 5surfaces. Technologically smooth wafers of semiconducting materials of Si and GaAs are used as ''trivial'' samples to determine the so called apparatus function. In addition I measured coherent reflectivity maps from thin film of highly scattering material of Pt with high atom number, Z=78 and patterned semiconducting surface like a GaAs surface grating which provides a certain periodicity in the measured scattering intensity. Finally I measured the surface speckles from a spatially confined Si wafer under the constraint that the size of the sample is smaller than the footprint of the incoming beam at the sample position. To reconstruct surface morphology from coherent reflectivity data is a typical inverse problem. Conventional phase retrieval algorithms like Gerchberg-Saxton (GS) algorithm, error reduction (ER) algorithm, hybrid input-output (HIO) algorithm are used in earlier work by other authors. I modified the conventional GS algorithm and ER algorithm which takes into account the additional Fresnel propagator term and also the illumination function at the sample position. I tested the modified algorithm successfully for a model surface in the form of a surface grating. I used the modified algorithm to reconstruct surface morphology from various static speckle measurements I performed at EDR beamline. The surface profiles reconstructed for different samples from the data at different energies (below the critical energy for the material at a particular incident angle) show almost the same roughness behavior for surface height with mean roughness of {proportional_to}1 nm. With the static speckle data I measured I could retrieve a one-dimensional picture of the sample surface with spatial

  4. Anisotropy of the Seebeck Coefficient in the Cuprate Superconductor YBa_{2}Cu_{3}O_{y}: Fermi-Surface Reconstruction by Bidirectional Charge Order

    Directory of Open Access Journals (Sweden)

    O. Cyr-Choinière

    2017-09-01

    Full Text Available The Seebeck coefficient S of the cuprate YBa_{2}Cu_{3}O_{y} is measured in magnetic fields large enough to suppress superconductivity, at hole dopings p=0.11 and p=0.12, for heat currents along the a and b directions of the orthorhombic crystal structure. For both directions, S/T decreases and becomes negative at low temperature, a signature that the Fermi surface undergoes a reconstruction due to broken translational symmetry. Above a clear threshold field, a strong new feature appears in S_{b}, for conduction along the b axis only. We attribute this feature to the onset of 3D-coherent unidirectional charge-density-wave modulations seen by x-ray diffraction, also along the b axis only. Because these modulations have a sharp onset temperature well below the temperature where S/T starts to drop towards negative values, we infer that they are not the cause of Fermi-surface reconstruction. Instead, the reconstruction must be caused by the quasi-2D bidirectional modulations that develop at significantly higher temperature. The unidirectional order only confers an additional anisotropy to the already reconstructed Fermi surface, also manifest as an in-plane anisotropy of the resistivity.

  5. Dynamic surface self-reconstruction is the key of highly active perovskite nano-electrocatalysts for water splitting

    Science.gov (United States)

    Fabbri, Emiliana; Nachtegaal, Maarten; Binninger, Tobias; Cheng, Xi; Kim, Bae-Jung; Durst, Julien; Bozza, Francesco; Graule, Thomas; Schäublin, Robin; Wiles, Luke; Pertoso, Morgan; Danilovic, Nemanja; Ayers, Katherine E.; Schmidt, Thomas J.

    2017-09-01

    The growing need to store increasing amounts of renewable energy has recently triggered substantial R&D efforts towards efficient and stable water electrolysis technologies. The oxygen evolution reaction (OER) occurring at the electrolyser anode is central to the development of a clean, reliable and emission-free hydrogen economy. The development of robust and highly active anode materials for OER is therefore a great challenge and has been the main focus of research. Among potential candidates, perovskites have emerged as promising OER electrocatalysts. In this study, by combining a scalable cutting-edge synthesis method with time-resolved X-ray absorption spectroscopy measurements, we were able to capture the dynamic local electronic and geometric structure during realistic operando conditions for highly active OER perovskite nanocatalysts. Ba0.5Sr0.5Co0.8Fe0.2O3-δ as nano-powder displays unique features that allow a dynamic self-reconstruction of the material’s surface during OER, that is, the growth of a self-assembled metal oxy(hydroxide) active layer. Therefore, besides showing outstanding performance at both the laboratory and industrial scale, we provide a fundamental understanding of the operando OER mechanism for highly active perovskite catalysts. This understanding significantly differs from design principles based on ex situ characterization techniques.

  6. Effets Seebeck et Nernst dans les cuprates: Etude de la reconstruction de la surface de Fermi sous champ magnetique intense

    Science.gov (United States)

    Laliberte, Francis

    2010-06-01

    Ce memoire presente des mesures de transport thermoelectrique, les effets Seebeck et Nernst, dans une serie d'echantillons de supraconducteurs a haute temperature critique. Des resultats obtenus recemment au Laboratoire National des Champs Magnetiques Intenses a Grenoble sur La1.7Eu0.2Sr0.1 CuO4, La1.675Eu0.2Sr0.125CuO 4, La1.64Eu0.2Sr0.16CuO4, La1.74Eu0.1Sr0.16CuO4 et La 1.4Nd0.4Sr0.2CuO4 sont analyses. Une attention particuliere est accordee aux equations de la theorie semi-classique du transport et leur validite est verifiee. La procedure experimentale et les materiaux utilises pour concevoir les montages de mesures sont expliques en detail. Enfin, un chapitre est dedie a l'explication et l'interpretation des resultats de transport thermoelectrique sur YBa2Cu3O6+delta publies au cours de l'hiver 2010 dans les revues Nature et Physical Review Letters. Les donnees d'effet Seebeck dans les echantillons de La 1.8-x,Eu0.2SrxCuO 4, ou un changement de signe est observe, permettent de conclure a la presence d'une poche d'electrons dans la surface de Fermi qui domine le transport a basse temperature dans la region sous-dopee du diagramme de phase. Cette conclusion est similaire a celle obtenue par des mesures d'effet Hall dans YBa 2Cu3O6+delta et elle cadre bien dans un scenario de reconstruction de la surface de Fermi. Les donnees d'effet Nernst recueillies indiquent que la contribution des fluctuations supraconductrices est limitee a un modeste intervalle de temperature au-dessus de la temperature critique.

  7. Effect of cognitive challenge on the postural control of patients with ACL reconstruction under visual and surface perturbations.

    Science.gov (United States)

    Lion, Alexis; Gette, Paul; Meyer, Christophe; Seil, Romain; Theisen, Daniel

    2018-02-01

    Our study aimed to evaluate the effect of cognitive challenge on double-leg postural control under visual and surface perturbations of patients with anterior cruciate ligament reconstruction (ACLR) cleared to return to sport. Double-leg stance postural control of 19 rehabilitated patients with ACLR (age: 24.8 ± 6.7 years, time since surgery: 9.2 ± 1.6 months) and 21 controls (age: 24.9 ± 3.7 years) was evaluated in eight randomized situations combining two cognitive (with and without silent backward counting in steps of seven), two visual (eyes open, eyes closed) and two surface (stable support, foam support) conditions. Sway area and sway path of the centre of foot pressure were measured during three 20-s recordings for each situation. Higher values indicated poorer postural control. Generally, postural control of patients with ACLR and controls was similar for sway area and sway path (p > 0.05). The lack of visual anchorage and the disturbance of the plantar input by the foam support increased sway area and sway path (p postural control during double-leg stance tests. The use of a dual task paradigm under increased task complexity modified postural control, but in a similar way in patients with ACLR than in healthy controls. Double-leg stance tests, even under challenging conditions, are not sensitive enough to reveal postural control differences between rehabilitated patients with ACLR and controls. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. Structure determination of the Si(001)-(2 x 1)-H reconstruction by surface X-ray diffraction: Weakening of the dimer bond by the addition of hydrogen

    DEFF Research Database (Denmark)

    Lauridsen, E.M.; Baker, J.; Nielsen, M.

    2000-01-01

    The atomic structure of the monohydride Si(001)-(2 x 1)-H reconstruction has been investigated by surface X-ray diffraction. Atomic relaxations down to the eighth layer have been determined. The bond length of the hydrogenated silicon dimers was found to be 2.47 +/- 0.02 Angstrom. which is longer...... than the dimer bond of the clean (2 x 1)-reconstructed Si(001) surface and also 5% longer than the bulk bond length of 2.35 Angstrom. The differences to the (2 x 1) structure of the clean surface are discussed in terms of the elimination of the weak pi-bond character of the dimer bond by the addition...

  9. Near surface geophysics techniques and geomorphological approach to reconstruct the hazard cave map in historical and urban areas

    Science.gov (United States)

    Lazzari, M.; Loperte, A.; Perrone, A.

    2009-04-01

    This work, carried out with an integrated methodological approach, focuses on the use of near surface geophysics techniques, such as ground penetrating radar GPR and electrical resistivity tomography (ERT), and geomorphological analysis, in order to reconstruct the cave distribution and geometry in a urban context and, in particular, in historical centres. In fact, there are a lot of historical Mediterranean sites born on an original rupestrian settlement, of which often the new generations forgot the memory and new urban areas built on them burying any marks. The interaction during recent centuries between human activity (caves excavation, birth and growth of an urban area) and the characters of the natural environment were the reasons of a progressive increase in hazard and vulnerability levels of several sites. The reconstruction of a detailed cave map distribution is the first step to define the anthropic and geomorphological hazard in urban areas, fundamental basis for planning and assessing the risk. The integrated near surface geophysics and geomorphological techniques have been applied to the case study of Tursi hilltop town and its older nucleus called Rabatana, located in the south-western sector of the Basilicata (southern Italy), representing an interesting example of the deep bond between natural and man-made environments such as precious cultural heritage. The history of this settlement has always been deeply connected with the characteristics of the neighbouring environment and it seems possible that the first settlement was built by excavating the slopes of the sandy relief. It was a typical rupestrian settlement, where meteoric water was stored inside some cisterns excavated on the slopes. During recent centuries, the increase in territory development by humans produced an increase in cave excavation in the Tursi-Rabatana urban area. To reconstruct the extremely complex near-surface hypogeal environment excavated in the sandy layers, a geophysical

  10. Perspectives in Super-resolved Fluorescence Microscopy: What comes next?

    Science.gov (United States)

    Cremer, Christoph; Birk, Udo

    2016-04-01

    The Nobel Prize in Chemistry 2014 has been awarded to three scientists involved in the development of STED and PALM super-resolution fluorescence microscopy (SRM) methods. They have proven that it is possible to overcome the hundred year old theoretical limit for the resolution potential of light microscopy (of about 200 nm for visible light), which for decades has precluded a direct glimpse of the molecular machinery of life. None of the present-day super-resolution techniques have invalidated the Abbe limit for light optical detection; however, they have found clever ways around it. In this report, we discuss some of the challenges still to be resolved before arising SRM approaches will be fit to bring about the revolution in Biology and Medicine envisaged. Some of the challenges discussed are the applicability to image live and/or large samples, the further enhancement of resolution, future developments of labels, and multi-spectral approaches.

  11. Perspectives in Super-resolved Fluorescence Microscopy: What comes next?

    Directory of Open Access Journals (Sweden)

    Christoph eCremer

    2016-04-01

    Full Text Available The Nobel Prize in Chemistry 2014 has been awarded to three scientists involved in the development of STED and PALM super-resolution fluorescence microscopy (SRM methods. They have proven that it is possible to overcome the hundred year old theoretical limit for the resolution potential of light microscopy (of about 200 nm for visible light, which for decades has precluded a direct glimpse of the molecular machinery of life. None of the present-day super-resolution techniques have invalidated the Abbe limit for light optical detection; however, they have found clever ways around it. In this report, we discuss some of the challenges still to be resolved before arising SRM approaches will be fit to bring about the revolution in Biology and Medicine envisaged. Some of the challenges discussed are the applicability to image live and/or large samples, the further enhancement of resolution, future developments of labels, and multi-spectral approaches.

  12. Super-resolving random-Gaussian apodized photon sieve.

    Science.gov (United States)

    Sabatyan, Arash; Roshaninejad, Parisa

    2012-09-10

    A novel apodized photon sieve is presented in which random dense Gaussian distribution is implemented to modulate the pinhole density in each zone. The random distribution in dense Gaussian distribution causes intrazone discontinuities. Also, the dense Gaussian distribution generates a substantial number of pinholes in order to form a large degree of overlap between the holes in a few innermost zones of the photon sieve; thereby, clear zones are formed. The role of the discontinuities on the focusing properties of the photon sieve is examined as well. Analysis shows that secondary maxima have evidently been suppressed, transmission has increased enormously, and the central maxima width is approximately unchanged in comparison to the dense Gaussian distribution. Theoretical results have been completely verified by experiment.

  13. On super resolved spots in the near-field regime

    NARCIS (Netherlands)

    Costa Assafrão, A.

    2013-01-01

    When dealing with optics, the increasing level of understanding of a given problem relies on a good description of the behavior of the light in that optical system. In general, a numerical model should be devised, based on experimental evidences, in order to account for the specific problem under

  14. Arbitrarily high super-resolving phase measurements at telecommunication wavelengths

    International Nuclear Information System (INIS)

    Kothe, Christian; Bjoerk, Gunnar; Bourennane, Mohamed

    2010-01-01

    We present two experiments that achieve phase super-resolution at telecommunication wavelengths. One of the experiments is realized in the space domain and the other is realized in the time domain. Both experiments show high visibility and are performed with standard lasers and single-photon detectors. The first experiment uses six-photon coincidences, whereas the latter experiment needs no coincidence measurements, is easy to perform, and achieves, in principle, arbitrarily high phase super-resolution. Here, we demonstrate a 30-fold increase of the resolution. We stress that neither entanglement nor joint detection is needed in these experiments, which demonstrates that neither is necessary to achieve phase super-resolution.

  15. GALAXY HALO TRUNCATION AND GIANT ARC SURFACE BRIGHTNESS RECONSTRUCTION IN THE CLUSTER MACSJ1206.2-0847

    Energy Technology Data Exchange (ETDEWEB)

    Eichner, Thomas; Seitz, Stella; Monna, Anna [Universitaets-Sternwarte Muenchen, Scheinerstr. 1, D-81679 Muenchen (Germany); Suyu, Sherry H. [Department of Physics, University of California, Santa Barbara, CA 93106 (United States); Halkola, Aleksi [Institute of Medical Engineering, University of Luebeck, Ratzeburger Allee 160 23562 Luebeck (Germany); Umetsu, Keiichi [Institute of Astronomy and Astrophysics, Academia Sinica, P.O. Box 23-141, Taipei 10617, Taiwan (China); Zitrin, Adi [Institut fuer Theoretische Astrophysik, ZAH, Albert-Ueberle-Strasse 2, D-69120 Heidelberg (Germany); Coe, Dan; Postman, Marc; Koekemoer, Anton; Bradley, Larry [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21208 (United States); Rosati, Piero [ESO-European Southern Observatory, D-85748 Garching bei Muenchen (Germany); Grillo, Claudio; Host, Ole [Dark Cosmology Centre, Niels Bohr Institute, University of Copenhagen, Juliane Maries Vej 30, DK-2100 Copenhagen (Denmark); Balestra, Italo [Max-Planck-Institut fuer Extraterrestrische Physik, Giessenbachstrasse, D-85748 Garching (Germany); Zheng, Wei; Lemze, Doron [Department of Physics and Astronomy, The Johns Hopkins University, 3400 North Charles Street, Baltimore, MD 21218 (United States); Broadhurst, Tom [Department of Theoretical Physics, University of the Basque Country, P.O. Box 644, E-48080 Bilbao (Spain); Moustakas, Leonidas [Jet Propulsion Laboratory, California Institute of Technology, MS 169-327, Pasadena, CA 91109 (United States); Molino, Alberto [Instituto de Astrofisica de Andalucia (CSIC), C/Camino Bajo de Huetor 24, Granada E-18008 (Spain); and others

    2013-09-10

    In this work, we analyze the mass distribution of MACSJ1206.2-0847, particularly focusing on the halo properties of its cluster members. The cluster appears relaxed in its X-ray emission, but has a significant amount of intracluster light that is not centrally concentrated, suggesting that galaxy-scale interactions are still ongoing despite the overall relaxed state. The cluster lenses 12 background galaxies into multiple images and one galaxy at z = 1.033 into a giant arc and its counterimage. The multiple image positions and the surface brightness (SFB) distribution of the arc, which is bent around several cluster members, are sensitive to the cluster galaxy halo properties. We model the cluster mass distribution with a Navarro-Frenk-White profile and the galaxy halos with two parameters for the mass normalization and the extent of a reference halo assuming scalings with their observed near-infrared light. We match the multiple image positions at an rms level of 0.''85 and can reconstruct the SFB distribution of the arc in several filters to a remarkable accuracy based on this cluster model. The length scale where the enclosed galaxy halo mass is best constrained is about 5 effective radii-a scale in between those accessible to dynamical and field strong-lensing mass estimates on the one hand and galaxy-galaxy weak-lensing results on the other hand. The velocity dispersion and halo size of a galaxy with m{sub 160W,AB} = 19.2 and M{sub B,Vega} = -20.7 are {sigma} = 150 km s{sup -1} and r Almost-Equal-To 26 {+-} 6 kpc, respectively, indicating that the halos of the cluster galaxies are tidally stripped. We also reconstruct the unlensed source, which is smaller by a factor of {approx}5.8 in area, demonstrating the increase in morphological information due to lensing. We conclude that this galaxy likely has star-forming spiral arms with a red (older) central component.

  16. GALAXY HALO TRUNCATION AND GIANT ARC SURFACE BRIGHTNESS RECONSTRUCTION IN THE CLUSTER MACSJ1206.2-0847

    International Nuclear Information System (INIS)

    Eichner, Thomas; Seitz, Stella; Monna, Anna; Suyu, Sherry H.; Halkola, Aleksi; Umetsu, Keiichi; Zitrin, Adi; Coe, Dan; Postman, Marc; Koekemoer, Anton; Bradley, Larry; Rosati, Piero; Grillo, Claudio; Høst, Ole; Balestra, Italo; Zheng, Wei; Lemze, Doron; Broadhurst, Tom; Moustakas, Leonidas; Molino, Alberto

    2013-01-01

    In this work, we analyze the mass distribution of MACSJ1206.2-0847, particularly focusing on the halo properties of its cluster members. The cluster appears relaxed in its X-ray emission, but has a significant amount of intracluster light that is not centrally concentrated, suggesting that galaxy-scale interactions are still ongoing despite the overall relaxed state. The cluster lenses 12 background galaxies into multiple images and one galaxy at z = 1.033 into a giant arc and its counterimage. The multiple image positions and the surface brightness (SFB) distribution of the arc, which is bent around several cluster members, are sensitive to the cluster galaxy halo properties. We model the cluster mass distribution with a Navarro-Frenk-White profile and the galaxy halos with two parameters for the mass normalization and the extent of a reference halo assuming scalings with their observed near-infrared light. We match the multiple image positions at an rms level of 0.''85 and can reconstruct the SFB distribution of the arc in several filters to a remarkable accuracy based on this cluster model. The length scale where the enclosed galaxy halo mass is best constrained is about 5 effective radii—a scale in between those accessible to dynamical and field strong-lensing mass estimates on the one hand and galaxy-galaxy weak-lensing results on the other hand. The velocity dispersion and halo size of a galaxy with m 160W,AB = 19.2 and M B,Vega = –20.7 are σ = 150 km s –1 and r ≈ 26 ± 6 kpc, respectively, indicating that the halos of the cluster galaxies are tidally stripped. We also reconstruct the unlensed source, which is smaller by a factor of ∼5.8 in area, demonstrating the increase in morphological information due to lensing. We conclude that this galaxy likely has star-forming spiral arms with a red (older) central component

  17. Risk Factors and Predictors of Significant Chondral Surface Change From Primary to Revision Anterior Cruciate Ligament Reconstruction: A MOON and MARS Cohort Study.

    Science.gov (United States)

    Magnussen, Robert A; Borchers, James R; Pedroza, Angela D; Huston, Laura J; Haas, Amanda K; Spindler, Kurt P; Wright, Rick W; Kaeding, Christopher C; Allen, Christina R; Anderson, Allen F; Cooper, Daniel E; DeBerardino, Thomas M; Dunn, Warren R; Lantz, Brett A; Mann, Barton; Stuart, Michael J; Albright, John P; Amendola, Annunziato; Andrish, Jack T; Annunziata, Christopher C; Arciero, Robert A; Bach, Bernard R; Baker, Champ L; Bartolozzi, Arthur R; Baumgarten, Keith M; Bechler, Jeffery R; Berg, Jeffrey H; Bernas, Geoffrey A; Brockmeier, Stephen F; Brophy, Robert H; Bush-Joseph, Charles A; Butler, J Brad; Campbell, John D; Carey, James L; Carpenter, James E; Cole, Brian J; Cooper, Jonathan M; Cox, Charles L; Creighton, R Alexander; Dahm, Diane L; David, Tal S; Flanigan, David C; Frederick, Robert W; Ganley, Theodore J; Garofoli, Elizabeth A; Gatt, Charles J; Gecha, Steven R; Giffin, James Robert; Hame, Sharon L; Hannafin, Jo A; Harner, Christopher D; Harris, Norman Lindsay; Hechtman, Keith S; Hershman, Elliott B; Hoellrich, Rudolf G; Hosea, Timothy M; Johnson, David C; Johnson, Timothy S; Jones, Morgan H; Kamath, Ganesh V; Klootwyk, Thomas E; Levy, Bruce A; Ma, C Benjamin; Maiers, G Peter; Marx, Robert G; Matava, Matthew J; Mathien, Gregory M; McAllister, David R; McCarty, Eric C; McCormack, Robert G; Miller, Bruce S; Nissen, Carl W; O'Neill, Daniel F; Owens, Brett D; Parker, Richard D; Purnell, Mark L; Ramappa, Arun J; Rauh, Michael A; Rettig, Arthur C; Sekiya, Jon K; Shea, Kevin G; Sherman, Orrin H; Slauterbeck, James R; Smith, Matthew V; Spang, Jeffrey T; Svoboda, Steven J; Taft, Timothy N; Tenuta, Joachim J; Tingstad, Edwin M; Vidal, Armando F; Viskontas, Darius G; White, Richard A; Williams, James S; Wolcott, Michelle L; Wolf, Brian R; York, James J

    2018-03-01

    Articular cartilage health is an important issue following anterior cruciate ligament (ACL) injury and primary ACL reconstruction. Factors present at the time of primary ACL reconstruction may influence the subsequent progression of articular cartilage damage. Larger meniscus resection at primary ACL reconstruction, increased patient age, and increased body mass index (BMI) are associated with increased odds of worsened articular cartilage damage at the time of revision ACL reconstruction. Case-control study; Level of evidence, 3. Subjects who had primary and revision data in the databases of the Multicenter Orthopaedics Outcomes Network (MOON) and Multicenter ACL Revision Study (MARS) were included. Reviewed data included chondral surface status at the time of primary and revision surgery, meniscus status at the time of primary reconstruction, primary reconstruction graft type, time from primary to revision ACL surgery, as well as demographics and Marx activity score at the time of revision. Significant progression of articular cartilage damage was defined in each compartment according to progression on the modified Outerbridge scale (increase ≥1 grade) or >25% enlargement in any area of damage. Logistic regression identified predictors of significant chondral surface change in each compartment from primary to revision surgery. A total of 134 patients were included, with a median age of 19.5 years at revision surgery. Progression of articular cartilage damage was noted in 34 patients (25.4%) in the lateral compartment, 32 (23.9%) in the medial compartment, and 31 (23.1%) in the patellofemoral compartment. For the lateral compartment, patients who had >33% of the lateral meniscus excised at primary reconstruction had 16.9-times greater odds of progression of articular cartilage injury than those with an intact lateral meniscus ( P < .001). For the medial compartment, patients who had <33% of the medial meniscus excised at the time of the primary reconstruction

  18. Temporal Surface Reconstruction

    Science.gov (United States)

    1991-05-03

    and the convergence cannot be guaranteed. Maybank [68] investigated alternative incremental schemes for the estimation of feature locations from a...depth from image sequences. International Journal of Computer Vision, 3, 1989. [68] S. J. Maybank . Filter based estimates of depth. In Proceedings of the

  19. Incremental and Enhanced Scanline-Based Segmentation Method for Surface Reconstruction of Sparse LiDAR Data

    Directory of Open Access Journals (Sweden)

    Weimin Wang

    2016-11-01

    Full Text Available The segmentation of point clouds is an important aspect of automated processing tasks such as semantic extraction. However, the sparsity and non-uniformity of the point clouds gathered by the popular 3D mobile LiDAR devices pose many challenges for existing segmentation methods. To improve the segmentation results of point clouds from mobile LiDAR devices, we propose an optimized segmentation method based on Scanline Continuity Constraint (SLCC in this work. Unlike conventional scanline-based segmentation methods, SLCC clusters scanlines using the continuity constraints in terms of the distance as well as the direction of two consecutive points. In addition, scanline clusters are agglomerated not only into primitive geometrical shapes but also irregular shapes. Another downside to existing segmentation methods is that they are not capable of incremental processing. This causes unnecessary memory and time consumption for applications that require frame-wise segmentation or when new point clouds are added. In order to address this, we propose an incremental scheme—the Incremental Recursive Segmentation (IRIS, that can be easily applied to any segmentation method. IRIS is achieved by combining the segments of newly added point clouds and the previously segmented results. Furthermore, as an example application, we construct a processing pipeline consisting of plane fitting and surface reconstruction using the segmentation results. Finally, we evaluate the proposed methods on three datasets acquired from a handheld Velodyne HDL-32E LiDAR device. The experimental results verify the efficiency of IRIS for any segmentation method and the advantages of SLCC for processing mobile LiDAR data.

  20. Using machine learning and surface reconstruction to accurately differentiate different trajectories of mood and energy dysregulation in youth.

    Science.gov (United States)

    Versace, Amelia; Sharma, Vinod; Bertocci, Michele A; Bebko, Genna; Iyengar, Satish; Dwojak, Amanda; Bonar, Lisa; Perlman, Susan B; Schirda, Claudiu; Travis, Michael; Gill, Mary Kay; Diwadkar, Vaibhav A; Sunshine, Jeffrey L; Holland, Scott K; Kowatch, Robert A; Birmaher, Boris; Axelson, David; Frazier, Thomas W; Arnold, L Eugene; Fristad, Mary A; Youngstrom, Eric A; Horwitz, Sarah M; Findling, Robert L; Phillips, Mary L

    2017-01-01

    Difficulty regulating positive mood and energy is a feature that cuts across different pediatric psychiatric disorders. Yet, little is known regarding the neural mechanisms underlying different developmental trajectories of positive mood and energy regulation in youth. Recent studies indicate that machine learning techniques can help elucidate the role of neuroimaging measures in classifying individual subjects by specific symptom trajectory. Cortical thickness measures were extracted in sixty-eight anatomical regions covering the entire brain in 115 participants from the Longitudinal Assessment of Manic Symptoms (LAMS) study and 31 healthy comparison youth (12.5 y/o;-Male/Female = 15/16;-IQ = 104;-Right/Left handedness = 24/5). Using a combination of trajectories analyses, surface reconstruction, and machine learning techniques, the present study aims to identify the extent to which measures of cortical thickness can accurately distinguish youth with higher (n = 18) from those with lower (n = 34) trajectories of manic-like behaviors in a large sample of LAMS youth (n = 115; 13.6 y/o; M/F = 68/47, IQ = 100.1, R/L = 108/7). Machine learning analyses revealed that widespread cortical thickening in portions of the left dorsolateral prefrontal cortex, right inferior and middle temporal gyrus, bilateral precuneus, and bilateral paracentral gyri and cortical thinning in portions of the right dorsolateral prefrontal cortex, left ventrolateral prefrontal cortex, and right parahippocampal gyrus accurately differentiate (Area Under Curve = 0.89;p = 0.03) youth with different (higher vs lower) trajectories of positive mood and energy dysregulation over a period up to 5years, as measured by the Parent General Behavior Inventory-10 Item Mania Scale. Our findings suggest that specific patterns of cortical thickness may reflect transdiagnostic neural mechanisms associated with different temporal trajectories of positive mood and energy dysregulation in youth. This approach has

  1. Using machine learning and surface reconstruction to accurately differentiate different trajectories of mood and energy dysregulation in youth.

    Directory of Open Access Journals (Sweden)

    Amelia Versace

    Full Text Available Difficulty regulating positive mood and energy is a feature that cuts across different pediatric psychiatric disorders. Yet, little is known regarding the neural mechanisms underlying different developmental trajectories of positive mood and energy regulation in youth. Recent studies indicate that machine learning techniques can help elucidate the role of neuroimaging measures in classifying individual subjects by specific symptom trajectory. Cortical thickness measures were extracted in sixty-eight anatomical regions covering the entire brain in 115 participants from the Longitudinal Assessment of Manic Symptoms (LAMS study and 31 healthy comparison youth (12.5 y/o;-Male/Female = 15/16;-IQ = 104;-Right/Left handedness = 24/5. Using a combination of trajectories analyses, surface reconstruction, and machine learning techniques, the present study aims to identify the extent to which measures of cortical thickness can accurately distinguish youth with higher (n = 18 from those with lower (n = 34 trajectories of manic-like behaviors in a large sample of LAMS youth (n = 115; 13.6 y/o; M/F = 68/47, IQ = 100.1, R/L = 108/7. Machine learning analyses revealed that widespread cortical thickening in portions of the left dorsolateral prefrontal cortex, right inferior and middle temporal gyrus, bilateral precuneus, and bilateral paracentral gyri and cortical thinning in portions of the right dorsolateral prefrontal cortex, left ventrolateral prefrontal cortex, and right parahippocampal gyrus accurately differentiate (Area Under Curve = 0.89;p = 0.03 youth with different (higher vs lower trajectories of positive mood and energy dysregulation over a period up to 5years, as measured by the Parent General Behavior Inventory-10 Item Mania Scale. Our findings suggest that specific patterns of cortical thickness may reflect transdiagnostic neural mechanisms associated with different temporal trajectories of positive mood and energy dysregulation in youth. This

  2. Reconstructed Solar-Induced Fluorescence: A Machine Learning Vegetation Product Based on MODIS Surface Reflectance to Reproduce GOME-2 Solar-Induced Fluorescence

    Science.gov (United States)

    Gentine, P.; Alemohammad, S. H.

    2018-04-01

    Solar-induced fluorescence (SIF) observations from space have resulted in major advancements in estimating gross primary productivity (GPP). However, current SIF observations remain spatially coarse, infrequent, and noisy. Here we develop a machine learning approach using surface reflectances from Moderate Resolution Imaging Spectroradiometer (MODIS) channels to reproduce SIF normalized by clear sky surface irradiance from the Global Ozone Monitoring Experiment-2 (GOME-2). The resulting product is a proxy for ecosystem photosynthetically active radiation absorbed by chlorophyll (fAPARCh). Multiplying this new product with a MODIS estimate of photosynthetically active radiation provides a new MODIS-only reconstruction of SIF called Reconstructed SIF (RSIF). RSIF exhibits much higher seasonal and interannual correlation than the original SIF when compared with eddy covariance estimates of GPP and two reference global GPP products, especially in dry and cold regions. RSIF also reproduces intense productivity regions such as the U.S. Corn Belt contrary to typical vegetation indices and similarly to SIF.

  3. Modeling the Non-Equilibrium Process of the Chemical Adsorption of Ammonia on GaN(0001) Reconstructed Surfaces Based on Steepest-Entropy-Ascent Quantum Thermodynamics.

    Science.gov (United States)

    Kusaba, Akira; Li, Guanchen; von Spakovsky, Michael R; Kangawa, Yoshihiro; Kakimoto, Koichi

    2017-08-15

    Clearly understanding elementary growth processes that depend on surface reconstruction is essential to controlling vapor-phase epitaxy more precisely. In this study, ammonia chemical adsorption on GaN(0001) reconstructed surfaces under metalorganic vapor phase epitaxy (MOVPE) conditions (3Ga-H and N ad -H + Ga-H on a 2 × 2 unit cell) is investigated using steepest-entropy-ascent quantum thermodynamics (SEAQT). SEAQT is a thermodynamic-ensemble based, first-principles framework that can predict the behavior of non-equilibrium processes, even those far from equilibrium where the state evolution is a combination of reversible and irreversible dynamics. SEAQT is an ideal choice to handle this problem on a first-principles basis since the chemical adsorption process starts from a highly non-equilibrium state. A result of the analysis shows that the probability of adsorption on 3Ga-H is significantly higher than that on N ad -H + Ga-H. Additionally, the growth temperature dependence of these adsorption probabilities and the temperature increase due to the heat of reaction is determined. The non-equilibrium thermodynamic modeling applied can lead to better control of the MOVPE process through the selection of preferable reconstructed surfaces. The modeling also demonstrates the efficacy of DFT-SEAQT coupling for determining detailed non-equilibrium process characteristics with a much smaller computational burden than would be entailed with mechanics-based, microscopic-mesoscopic approaches.

  4. Development of new anatomy reconstruction software to localize cardiac isochrones to the cardiac surface from the 12 lead ECG.

    Science.gov (United States)

    van Dam, Peter M; Gordon, Jeffrey P; Laks, Michael M; Boyle, Noel G

    2015-01-01

    Non-invasive electrocardiographic imaging (ECGI) of the cardiac muscle can help the pre-procedure planning of the ablation of ventricular arrhythmias by reducing the time to localize the origin. Our non-invasive ECGI system, the cardiac isochrone positioning system (CIPS), requires non-intersecting meshes of the heart, lungs and torso. However, software to reconstruct the meshes of the heart, lungs and torso with the capability to check and prevent these intersections is currently lacking. Consequently the reconstruction of a patient specific model with realistic atrial and ventricular wall thickness and incorporating blood cavities, lungs and torso usually requires additional several days of manual work. Therefore new software was developed that checks and prevents any intersections, and thus enables the use of accurate reconstructed anatomical models within CIPS. In this preliminary study we investigated the accuracy of the created patient specific anatomical models from MRI or CT. During the manual segmentation of the MRI data the boundaries of the relevant tissues are determined. The resulting contour lines are used to automatically morph reference meshes of the heart, lungs or torso to match the boundaries of the morphed tissue. Five patients were included in the study; models of the heart, lungs and torso were reconstructed from standard cardiac MRI images. The accuracy was determined by computing the distance between the segmentation contours and the morphed meshes. The average accuracy of the reconstructed cardiac geometry was within 2mm with respect to the manual segmentation contours on the MRI images. Derived wall volumes and left ventricular wall thickness were within the range reported in literature. For each reconstructed heart model the anatomical heart axis was computed using the automatically determined anatomical landmarks of the left apex and the mitral valve. The accuracy of the reconstructed heart models was well within the accuracy of the used

  5. Reconstruction of mechanically recorded sound from an edison cylinder using three dimensional non-contact optical surface metrology

    Energy Technology Data Exchange (ETDEWEB)

    Fadeyev, V.; Haber, C.; Maul, C.; McBride, J.W.; Golden, M.

    2004-04-20

    Audio information stored in the undulations of grooves in a medium such as a phonograph disc record or cylinder may be reconstructed, without contact, by measuring the groove shape using precision optical metrology methods and digital image processing. The viability of this approach was recently demonstrated on a 78 rpm shellac disc using two dimensional image acquisition and analysis methods. The present work reports the first three dimensional reconstruction of mechanically recorded sound. The source material, a celluloid cylinder, was scanned using color coded confocal microscopy techniques and resulted in a faithful playback of the recorded information.

  6. Chemical and valence reconstruction at the surface of SmB6 revealed by means of resonant soft x-ray reflectometry

    Science.gov (United States)

    Zabolotnyy, V. B.; Fürsich, K.; Green, R. J.; Lutz, P.; Treiber, K.; Min, Chul-Hee; Dukhnenko, A. V.; Shitsevalova, N. Y.; Filipov, V. B.; Kang, B. Y.; Cho, B. K.; Sutarto, R.; He, Feizhou; Reinert, F.; Inosov, D. S.; Hinkov, V.

    2018-05-01

    Samarium hexaboride (SmB6), a Kondo insulator with mixed valence, has recently attracted much attention as a possible host for correlated topological surface states. Here, we use a combination of x-ray absorption and reflectometry techniques, backed up with a theoretical model for the resonant M4 ,5 absorption edge of Sm and photoemission data, to establish laterally averaged chemical and valence depth profiles at the surface of SmB6. We show that upon cleaving, the highly polar (001) surface of SmB6 undergoes substantial chemical and valence reconstruction, resulting in boron termination and a Sm3 + dominated subsurface region. Whereas at room temperature, the reconstruction occurs on a timescale of less than 2 h, it takes about 24 h below 50 K. The boron termination is eventually established, irrespective of the initial termination. Our findings reconcile earlier depth resolved photoemission and scanning tunneling spectroscopy studies performed at different temperatures and are important for better control of surface states in this system.

  7. Pinning-free GaAs MIS structures with Si interface control layers formed on (4 x 6) reconstructed (0 0 1) surface

    Energy Technology Data Exchange (ETDEWEB)

    Anantathanasarn, Sanguan; Hasegawa, Hideki

    2003-06-30

    (0 0 1)-Oriented GaAs metal-insulator-semiconductor (MIS) structures having a silicon interface control layer (Si ICL) were fabricated on surfaces having Ga-rich (4x6) reconstructions. Si ICL was grown by molecular beam epitaxy. MIS structures were fabricated by partially converting Si ICL to SiN{sub x} by direct nitridation, and further depositing a thick SiO{sub 2} layer on top as the main passivation dielectric by plasma-assisted chemical vapor deposition. Reflection high-energy electron diffraction, in situ X-ray photoelectron spectroscopy and MIS capacitance-voltage (C-V) techniques were used for characterization. The initial surface reconstruction was found to have a surprisingly strong effect on the degree of Fermi level pinning at the MIS interface. In contrast to the standard As-rich (2x4) surface, which results in strongly pinned MIS interfaces, the novel SiO{sub 2}/SiN{sub x}/Si ICL/GaAs MIS structures formed on ''genuine'' (4x6) surface realized complete unpinning of Fermi level over the entire band gap with a minimum interface state density of 4x10{sup 10} cm{sup -2} eV{sup -1} range.

  8. The role of target 3D-reconstructions when analysyng qualitative characteristics of the surface of circular-shaped growth in the lungs

    Directory of Open Access Journals (Sweden)

    V. G. Kolmogorov

    2016-01-01

    Full Text Available The purpose of this paper is to improve the accuracy of X-ray diagnostics of circular-shaped growth (CSG by developing computed tomographic semiotics of qualitative characteristics of its surface and the state of the surrounding bronchi using target 3D-reconstruction.Material and methods. 560 patients at the age of 3–89 years were examined. Target 3D reconstruction was carried out with the use of 3D Fly Through program (Toshiba Medical Systems, Japan which removed the tissue surrounding CSG at a distance of 5–10 mm from the outer boundaries.CSG was inscribed into a cube. In case of the primary central and peripheral lung cancer a number of patients with severe rough surface of CSG prevailed over a number of patients with slightly rough surface was detected. In case of infiltrative tuberculosis, pneumonia, echinococcus, retention cysts the prevalence of a number of patients with slightly rough surface of CSG over a number of patients with rough surface was identified. In case of single cancer metastases, single and multiple tuberculomas the prevalence of a number of patients with non-uniform smooth surface of CSG over a number of patients with uniform smooth surface was identified. In case of multiple cancer metastasis, focal tuberculosis, cysticercosis the prevalence of a number of patients with a uniform smooth surface of CSG over a number of patients with uneven smooth surface was identified. In case of benign tumors, eosinophilic infiltrate, gamartohondroma, aspergilloma, chronic abscess, intrapulmonary hematoma there was not difference between the number of patients with a uniform smooth surface of CSG and a number of patients with uneven smooth surface. In case of primary lung cancer metastasis, single and multiple tuberkulomas, echinococcus, cysticercosis there was a prevalence of the number of patients with expressed deformed bronchi surrounding CSL over a number of patients with moderately deformed bronchi. In case of infiltrative

  9. A 1200 Year Alkenone-based Reconstruction of Sea Surface Temperature and Marine Productivity in the Southern California Current System from the Medieval Climate Anomaly to Present

    Science.gov (United States)

    O'Mara, N. A.; Kelly, C. S.; Herbert, T.

    2017-12-01

    Laminated sediment cores taken from the San Lazaro Basin (SLB) (25.18N, 112.66W) located off the coast of Baja California in the subtropical eastern Pacific were geochemically analyzed for alkenone and sterol biomarkers to reconstruct sea surface temperature (SST) and marine productivity from 850-1980 CE. High sedimentation rates, low bottom water dissolved oxygen, and high marine productivity in combination with the San Lazaro Basin's location within the dynamic transition zone between the tropical and subtropical eastern Pacific, make it a prime location to study variability of tropical and subtropical modes of climate variability. This study focuses on the impacts and variability of the El Niño Southern Oscillation and the Pacific Decadal Oscillation on the subtropical eastern Pacific. SST and coccolithophore productivity (n=730) for 2 mm sections of sediment corresponding to 1 measurement every 1.8 years were reconstructed using the Uk'37 unsaturation index and C37 alkenone concentration. The high resolution of this record allowed for the analysis of variability of SST and productivity on decadal timescales. Brassicasterol concentrations were calculated for a limited number of samples (n=44) to assess diatom productivity. High spectral power was found at periods of 20-30 years in SST and productivity records indicating a strong influence of the PDO on the SLB, making this the first marine based record directly relevant to PDO reconstructions that continuously spans the last millennium. Cool and productive (warm and less productive) waters were observed in the southern California Current in the Medieval Climate Anomaly 900-1200 CE (Little Ice Age 1400-1800 CE) supporting previous reconstructions that warmer (cooler) SST are linked to both reduced (enhanced) phytoplankton productivity. Additionally, cool (warm) SST were also associated with dry (wet) conditions in the American Southwest indicating that changes in the PDO has had a significant impact on drought

  10. Reconstruction de la surface de Fermi dans l'etat normal d'un supraconducteur a haute Tc: Une etude du transport electrique en champ magnetique intense

    Science.gov (United States)

    Le Boeuf, David

    Des mesures de resistance longitudinale et de resistance de Hall en champ magnetique intense transverse (perpendiculaire aux plans CuO2) ont ete effectuees au sein de monocristaux de YBa2Cu3Oy (YBCO) demacles, ordonnes et de grande purete, afin d'etudier l'etat fondamental des supraconducteurs a haute Tc dans le regime sous-dope. Cette etude a ete realisee en fonction du dopage et de l'orientation du courant d'excitation J par rapport a l'axe orthorhombique b de la structure cristalline. Les mesures en champ magnetique intense revelent par suppression de la supraconductivite des oscillations magnetiques des resistances longitudinale et de Hall dans YBa2Cu 3O6.51 et YBa2Cu4O8. La conformite du comportement de ces oscillations quantiques au formalisme de Lifshitz-Kosevich, apporte la preuve de l'existence d'une surface de Fermi fermee a caractere quasi-2D, abritant des quasiparticules coherentes respectant la statistique de Fermi-Dirac, dans la phase pseudogap d'YBCO. La faible frequence des oscillations quantiques, combinee avec l'etude de la partie monotone de la resistance de Hall en fonction de la temperature indique que la surface de Fermi d'YBCO sous-dope comprend une petite poche de Fermi occupee par des porteurs de charge negative. Cette particularite de la surface de Fermi dans le regime sous-dope incompatible avec les calculs de structure de bande est en fort contraste avec la structure electronique presente dans le regime surdope. Cette observation implique ainsi l'existence d'un point critique quantique dans le diagramme de phase d'YBCO, au voisinage duquel la surface de Fermi doit subir une reconstruction induite par l'etablissement d'une brisure de la symetrie de translation du reseau cristallin sous-jacent. Enfin, l'etude en fonction du dopage de la resistance de Hall et de la resistance longitudinale en champ magnetique intense suggere qu'un ordre du type onde de densite (DW) est responsable de la reconstruction de la surface de Fermi. L'analogie de

  11. Reconstructing satellite images to quantify spatially explicit land surface change caused by fires and succession: A demonstration in the Yukon River Basin of interior Alaska

    Science.gov (United States)

    Huang, Shengli; Jin, Suming; Dahal, Devendra; Chen, Xuexia; Young, Claudia; Liu, Heping; Liu, Shuguang

    2013-01-01

    Land surface change caused by fires and succession is confounded by many site-specific factors and requires further study. The objective of this study was to reveal the spatially explicit land surface change by minimizing the confounding factors of weather variability, seasonal offset, topography, land cover, and drainage. In a pilot study of the Yukon River Basin of interior Alaska, we retrieved Normalized Difference Vegetation Index (NDVI), albedo, and land surface temperature (LST) from a postfire Landsat image acquired on August 5th, 2004. With a Landsat reference image acquired on June 26th, 1986, we reconstructed NDVI, albedo, and LST of 1987–2004 fire scars for August 5th, 2004, assuming that these fires had not occurred. The difference between actual postfire and assuming-no-fire scenarios depicted the fires and succession impact. Our results demonstrated the following: (1) NDVI showed an immediate decrease after burning but gradually recovered to prefire levels in the following years, in which burn severity might play an important role during this process; (2) Albedo showed an immediate decrease after burning but then recovered and became higher than prefire levels; and (3) Most fires caused surface warming, but cooler surfaces did exist; time-since-fire affected the prefire and postfire LST difference but no absolute trend could be found. Our approach provided spatially explicit land surface change rather than average condition, enabling a better understanding of fires and succession impact on ecological consequences at the pixel level.

  12. A periodic mixed gaussians-plane waves DFT study on simple thiols on Au(111): adsorbate species, surface reconstruction, and thiols functionalization.

    Science.gov (United States)

    Rajaraman, Gopalan; Caneschi, Andrea; Gatteschi, Dante; Totti, Federico

    2011-03-07

    Here we present DFT calculations based on a periodic mixed gaussians/plane waves approach to study the energetics, structure, bonding of SAMs of simple thiols on Au(111). Several open issues such as structure, bonding and the nature of adsorbate are taken into account. We started with methyl thiols (MeSH) on Au(111) to establish the nature of the adsorbate. We have considered several structural models embracing the reconstructed surface scenario along with the MeS˙-Au(ad)-MeS˙ type motif put forward in recent years. Our calculations suggest a clear preference for the homolytic cleavage of the S-H bond leading to a stable MeS˙ on a gold surface. In agreement with the recent literature studies, the reconstructed models of the MeS˙ species are found to be energetically preferred over unreconstructed models. Besides, our calculations reveal that the model with 1:2 Au(ad)/thiols ratio, i.e. MeS˙-Au(ad)-MeS˙, is energetically preferred compared to the clean and 1:1 ratio models, in agreement with the experimental and theoretical evidences. We have also performed Molecular Orbital/Natural Bond Orbital, MO/NBO, analysis to understand the electronic structure and bonding in different structural motifs and many useful insights have been gained. Finally, the studies have then been extended to alkyl thiols of the RSR' (R, R' = Me, Et and Ph) type and here our calculations again reveal a preference for the RS˙ type species adsorption for clean as well as for reconstructed 1:2 Au(ad)/thiols ratio models.

  13. Lithium in the aragonite skeletons of massive Porites corals: A new tool to reconstruct tropical sea surface temperatures

    Science.gov (United States)

    Hathorne, Ed C.; Felis, Thomas; Suzuki, Atsushi; Kawahata, Hodaka; Cabioch, Guy

    2013-01-01

    Previous studies have demonstrated the potential for the Li content of coral aragonite to record information about environmental conditions, but no detailed study of tropical corals exists. Here we present the Li and Mg to Ca ratios at a bimonthly to monthly resolution over 25 years in two modern Porites corals, the genus most often used for paleoclimate reconstructions in the tropical Indo-Pacific. A strong relationship exists between coral Li/Ca and locally measured SST, indicating that coral Li/Ca can be used to reconstruct tropical SST variations. However, Li/Ca ratios of the skeleton deposited during 1979-1980 do not track local SST well and are anomalously high in places. The Mg/Ca ratios of this interval are also anomalously high, and we suggest Li/Ca can be used to reconstruct tropical SST only when Mg/Ca data are used to carefully screen for relatively rare biological effects. Mg/Li or Li/Mg ratios provide little advantage over Li/Ca ratios, except that the slope of the Li/Mg temperature relationship is more similar between the two corals. The Mg/Li temperature relationship for the coral that experienced a large temperature range is similar to that found for cold water corals and aragonitic benthic foraminifera in previous studies. The comparison with data from other biogenic aragonites suggests the relationship between Li/Mg and water temperature can be described by a single exponential relationship. Despite this hint at an overarching control, it is clear that biological processes strongly influence coral Li/Ca, and more calibration work is required before widely applying the proxy.

  14. X-ray micro-diffraction analysis of reconstructed bone at Zr prosthetic surface with sub-micrometre spatial resolution

    International Nuclear Information System (INIS)

    Cedola, A; Stanic, V; Burghammer, M; Lagomarsino, S; Rustichelli, F; Giardino, R; Aldini, N Nicoli; Fini, M; Komlev, V; Fonzo, S Di

    2003-01-01

    The purpose of the present investigation is to demonstrate the power of the x-ray micro-diffraction technique in biological studies. In particular the reported experiment concerns the study of the interface between a Zr prosthetic device implanted in a rat femur and the newly-formed bone, with a spatial resolution of 0.5 μm. The obtained results give interesting information on the Zr deformation and on the crystallographic phase, the grain size and the orientation of the new bone. Moreover the study reveals a marked difference in the structure of the reconstructed bone with respect to the native bone, which cannot be appreciated with other techniques. (note)

  15. Three-dimensional quantification of cardiac surface motion: a newly developed three-dimensional digital motion-capture and reconstruction system for beating heart surgery.

    Science.gov (United States)

    Watanabe, Toshiki; Omata, Sadao; Odamura, Motoki; Okada, Masahumi; Nakamura, Yoshihiko; Yokoyama, Hitoshi

    2006-11-01

    This study aimed to evaluate our newly developed 3-dimensional digital motion-capture and reconstruction system in an animal experiment setting and to characterize quantitatively the three regional cardiac surface motions, in the left anterior descending artery, right coronary artery, and left circumflex artery, before and after stabilization using a stabilizer. Six pigs underwent a full sternotomy. Three tiny metallic markers (diameter 2 mm) coated with a reflective material were attached on three regional cardiac surfaces (left anterior descending, right coronary, and left circumflex coronary artery regions). These markers were captured by two high-speed digital video cameras (955 frames per second) as 2-dimensional coordinates and reconstructed to 3-dimensional data points (about 480 xyz-position data per second) by a newly developed computer program. The remaining motion after stabilization ranged from 0.4 to 1.01 mm at the left anterior descending, 0.91 to 1.52 mm at the right coronary artery, and 0.53 to 1.14 mm at the left circumflex regions. Significant differences before and after stabilization were evaluated in maximum moving velocity (left anterior descending 456.7 +/- 178.7 vs 306.5 +/- 207.4 mm/s; right coronary artery 574.9 +/- 161.7 vs 446.9 +/- 170.7 mm/s; left circumflex 578.7 +/- 226.7 vs 398.9 +/- 192.6 mm/s; P heart surface movement. This helps us better understand the complexity of the heart, its motion, and the need for developing a better stabilizer for beating heart surgery.

  16. Reconstructing turbidity in a glacially influenced lake using the Landsat TM and ETM+ surface reflectance climate data record archive, Lake Clark, Alaska

    Science.gov (United States)

    Baughman, Carson; Jones, Benjamin M.; Bartz, Krista K.; Young, Daniel B.; Zimmerman, Christian E.

    2015-01-01

    Lake Clark is an important nursery lake for sockeye salmon (Oncorhynchus nerka) in the headwaters of Bristol Bay, Alaska, the most productive wild salmon fishery in the world. Reductions in water clarity within Alaska lake systems as a result of increased glacial runoff have been shown to reduce salmon production via reduced abundance of zooplankton and macroinvertebrates. In this study, we reconstruct long-term, lake-wide water clarity for Lake Clark using the Landsat TM and ETM+ surface reflectance products (1985–2014) and in situwater clarity data collected between 2009 and 2013. Analysis of a Landsat scene acquired in 2009, coincident with in situ measurements in the lake, and uncertainty analysis with four scenes acquired within two weeks of field data collection showed that Band 3 surface reflectance was the best indicator of turbidity (r2 = 0.55,RMSE turbidity for Lake Clark between 1991 and 2014. We did, however, detect interannual variation that exhibited a non-significant (r2 = 0.20) but positive correlation (r = 0.20) with regional mean summer air temperature and found the month of May exhibited a significant positive trend (r2 = 0.68, p = 0.02) in turbidity between 2000 and 2014. This study demonstrates the utility of hindcasting turbidity in a glacially influenced lake using the Landsat surface reflectance products. It may also help land and resource managers reconstruct turbidity records for lakes that lack in situ monitoring, and may be useful in predicting future water clarity conditions based on projected climate scenarios.

  17. Molar concentration-depth profiles at the solution surface of a cationic surfactant reconstructed with angle resolved X-ray photoelectron spectroscopy

    International Nuclear Information System (INIS)

    Wang Chuangye; Morgner, Harald

    2011-01-01

    In the current work, we first reconstructed the molar fraction-depth profiles of cation and anion near the surface of tetrabutylammonium iodide dissolved in formamide by a refined calculation procedure, based on angle resolved X-ray photoelectron spectroscopy experiments. In this calculation procedure, both the transmission functions of the core levels and the inelastic mean free paths of the photoelectrons have been taken into account. We have evaluated the partial molar volumes of surfactant and solvent by the densities of such solutions with different bulk concentrations. With those partial molar volumes, the molar concentration-depth profiles of tetrabutylammonium ion and iodide ion were determined. The surface excesses of both surfactant ions were then achieved directly by integrating these depth profiles. The anionic molar concentration-depth profiles and surface excesses have been compared with their counterparts determined by neutral impact ion scattering spectroscopy. The comparisons exhibit good agreements. Being capable of determining molar concentration-depth profiles of surfactant ions by core levels with different kinetic energies may extend the applicable range of ARXPS in investigating solution surfaces.

  18. 3-D surface reconstruction of patient specific anatomic data using a pre-specified number of polygons.

    Science.gov (United States)

    Aharon, S; Robb, R A

    1997-01-01

    Virtual reality environments provide highly interactive, natural control of the visualization process, significantly enhancing the scientific value of the data produced by medical imaging systems. Due to the computational and real time display update requirements of virtual reality interfaces, however, the complexity of organ and tissue surfaces which can be displayed is limited. In this paper, we present a new algorithm for the production of a polygonal surface containing a pre-specified number of polygons from patient or subject specific volumetric image data. The advantage of this new algorithm is that it effectively tiles complex structures with a specified number of polygons selected to optimize the trade-off between surface detail and real-time display rates.

  19. Postoperative follow-up study of craniosynostosis using three-dimensional surface reconstruction CT (3D-CT)

    Energy Technology Data Exchange (ETDEWEB)

    Nishimoto, Hiroshi; Tsukiyama, Takashi; Nishimura, Jiro; Fujioka, Mutsuhisa; Tsubokawa, Takashi.

    1988-12-01

    In 1983, Michael W. Vannier and Jeffrey L. Marsh developed a computer method that reconstructs three-dimensional images from high-resolution CT-scan series of the facial skeleton. This method has been applied to craniofacial anomalies, basal encephalocele, and other skeletal pathologies. In this study, the postoperative assessment of craniofacial surgical results has been accomplished using 3D-CT techniques in craniosynostosis. The results are as follows: (1) Postoperative 3D-CTs reveal the bony anatomical details corrected by the craniofacial surgery more precisely and more stereographically than do conventional radiological techniques. (2) Secondary changes in the cranium after the surgery, such as reossification at the area of osteotomies or postoperative asymmetric skull deformities, are more early detected by the 3D-CT imaging technique than by a craniogram. (3) In 3D-CT images, internal views of the skull, such mid-sagittal, rear internal, or top axial views of the intracranial skull base, are most useful in postoperative assessments of the surgical results and of postoperative secondary changes in the cranium. Based on our experience, we expect that 3D-CT imaging techniques will become more important in the management of craniosynostosis.

  20. Postoperative follow-up study of craniosynostosis using three-dimensional surface reconstruction CT (3D-CT)

    International Nuclear Information System (INIS)

    Nishimoto, Hiroshi; Tsukiyama, Takashi; Nishimura, Jiro; Fujioka, Mutsuhisa; Tsubokawa, Takashi.

    1988-01-01

    In 1983, Michael W. Vannier and Jeffrey L. Marsh developed a computer method that reconstructs three-dimensional images from high-resolution CT-scan series of the facial skeleton. This method has been applied to craniofacial anomalies, basal encephalocele, and other skeletal pathologies. In this study, the postoperative assessment of craniofacial surgical results has been accomplished using 3D-CT techniques in craniosynostosis. The results are as follows: 1) Postoperative 3D-CTs reveal the bony anatomical details corrected by the craniofacial surgery more precisely and more stereographically than do conventional radiological techniques. 2) Secondary changes in the cranium after the surgery, such as reossification at the area of osteotomies or postoperative asymmetric skull deformities, are more early detected by the 3D-CT imaging technique than by a craniogram. 3) In 3D-CT images, internal views of the skull, such mid-sagittal, rear internal, or top axial views of the intracranial skull base, are most useful in postoperative assessments of the surgical results and of postoperative secondary changes in the cranium. Based on our experience, we expect that 3D-CT imaging techniques will become more important in the management of craniosynostosis. (author)

  1. Surface-reconstructed Cu Electrode via a Facile Electrochemical Anodization-Reduction Process for Low Overpotential CO 2 reduction

    KAUST Repository

    Min, Shixiong

    2017-03-21

    A high-surface-area Cu electrode, fabricated by a simple electrochemical anodization-reduction method, exhibits high activity and selectivity for CO2 reduction at low overpotential in 0.1 M KHCO3 solution. A faradaic efficiency of 37% for HCOOH and 27% for CO production was achieved with the current density of 1.5 mA cm-2 at −0.64 V vs. RHE, much higher than that of polycrystalline Cu. The enhanced catalytic performance is a result of the formation of the high electrochemical active surface area and high density of preferred low-index facets.

  2. A comparison of PMIP2 model simulations and the MARGO proxy reconstruction for tropical sea surface temperatures at last glacial maximum

    Energy Technology Data Exchange (ETDEWEB)

    Otto-Bliesner, Bette L.; Brady, E.C. [National Center for Atmospheric Research, Climate and Global Dynamics Division, Boulder, CO (United States); Schneider, Ralph; Weinelt, M. [Christian-Albrechts Universitaet, Institut fuer Geowissenschaften, Kiel (Germany); Kucera, M. [Eberhard-Karls Universitaet Tuebingen, Institut fuer Geowissenschaften, Tuebingen (Germany); Abe-Ouchi, A. [The University of Tokyo, Center for Climate System Research, Kashiwa (Japan); Bard, E. [CEREGE, College de France, CNRS, Universite Aix-Marseille, Aix-en-Provence (France); Braconnot, P.; Kageyama, M.; Marti, O.; Waelbroeck, C. [Unite mixte CEA-CNRS-UVSQ, Laboratoire des Sciences du Climat et de l' Environnement, Gif-sur-Yvette Cedex (France); Crucifix, M. [Universite Catholique de Louvain, Institut d' Astronomie et de Geophysique Georges Lemaitre, Louvain-la-Neuve (Belgium); Hewitt, C.D. [Met Office Hadley Centre, Exeter (United Kingdom); Paul, A. [Bremen University, Department of Geosciences, Bremen (Germany); Rosell-Mele, A. [Universitat Autonoma de Barcelona, ICREA and Institut de Ciencia i Tecnologia Ambientals, Barcelona (Spain); Weber, S.L. [Royal Netherlands Meteorological Institute (KNMI), De Bilt (Netherlands); Yu, Y. [Chinese Academy of Sciences, LASG, Institute of Atmospheric Physics, Beijing (China)

    2009-05-15

    Results from multiple model simulations are used to understand the tropical sea surface temperature (SST) response to the reduced greenhouse gas concentrations and large continental ice sheets of the last glacial maximum (LGM). We present LGM simulations from the Paleoclimate Modelling Intercomparison Project, Phase 2 (PMIP2) and compare these simulations to proxy data collated and harmonized within the Multiproxy Approach for the Reconstruction of the Glacial Ocean Surface Project (MARGO). Five atmosphere-ocean coupled climate models (AOGCMs) and one coupled model of intermediate complexity have PMIP2 ocean results available for LGM. The models give a range of tropical (defined for this paper as 15 S-15 N) SST cooling of 1.0-2.4 C, comparable to the MARGO estimate of annual cooling of 1.7{+-}1 C. The models simulate greater SST cooling in the tropical Atlantic than tropical Pacific, but interbasin and intrabasin variations of cooling are much smaller than those found in the MARGO reconstruction. The simulated tropical coolings are relatively insensitive to season, a feature also present in the MARGO transferred-based estimates calculated from planktonic foraminiferal assemblages for the Indian and Pacific Oceans. These assemblages indicate seasonality in cooling in the Atlantic basin, with greater cooling in northern summer than northern winter, not captured by the model simulations. Biases in the simulations of the tropical upwelling and thermocline found in the preindustrial control simulations remain for the LGM simulations and are partly responsible for the more homogeneous spatial and temporal LGM tropical cooling simulated by the models. The PMIP2 LGM simulations give estimates for the climate sensitivity parameter of 0.67 -0.83 C per Wm{sup -2}, which translates to equilibrium climate sensitivity for doubling of atmospheric CO{sub 2} of 2.6-3.1 C. (orig.)

  3. Surface-reconstructed Cu Electrode via a Facile Electrochemical Anodization-Reduction Process for Low Overpotential CO 2 reduction

    KAUST Repository

    Min, Shixiong; Yang, Xiulin; Lu, Ang-Yu; Tseng, Chien-Chih; Hedhili, Mohamed N.; Lai, Zhiping; Li, Lain-Jong; Huang, Kuo-Wei

    2017-01-01

    A high-surface-area Cu electrode, fabricated by a simple electrochemical anodization-reduction method, exhibits high activity and selectivity for CO2 reduction at low overpotential in 0.1 M KHCO3 solution. A faradaic efficiency of 37% for HCOOH

  4. Influence of Head Motion on the Accuracy of 3D Reconstruction with Cone-Beam CT: Landmark Identification Errors in Maxillofacial Surface Model.

    Directory of Open Access Journals (Sweden)

    Kyung-Min Lee

    Full Text Available The purpose of this study was to investigate the influence of head motion on the accuracy of three-dimensional (3D reconstruction with cone-beam computed tomography (CBCT scan.Fifteen dry skulls were incorporated into a motion controller which simulated four types of head motion during CBCT scan: 2 horizontal rotations (to the right/to the left and 2 vertical rotations (upward/downward. Each movement was triggered to occur at the start of the scan for 1 second by remote control. Four maxillofacial surface models with head motion and one control surface model without motion were obtained for each skull. Nine landmarks were identified on the five maxillofacial surface models for each skull, and landmark identification errors were compared between the control model and each of the models with head motion.Rendered surface models with head motion were similar to the control model in appearance; however, the landmark identification errors showed larger values in models with head motion than in the control. In particular, the Porion in the horizontal rotation models presented statistically significant differences (P < .05. Statistically significant difference in the errors between the right and left side landmark was present in the left side rotation which was opposite direction to the scanner rotation (P < .05.Patient movement during CBCT scan might cause landmark identification errors on the 3D surface model in relation to the direction of the scanner rotation. Clinicians should take this into consideration to prevent patient movement during CBCT scan, particularly horizontal movement.

  5. A statistical-dynamical scheme for reconstructing ocean forcing in the Atlantic. Part I: weather regimes as predictors for ocean surface variables

    Energy Technology Data Exchange (ETDEWEB)

    Cassou, Christophe; Minvielle, Marie; Terray, Laurent [CERFACS/CNRS, Climate Modelling and Global Change Team, Toulouse (France); Perigaud, Claire [JPL-NASA, Ocean Science Element, Pasadena, CA (United States)

    2011-01-15

    The links between the observed variability of the surface ocean variables estimated from reanalysis and the overlying atmosphere decomposed in classes of large-scale atmospheric circulation via clustering are investigated over the Atlantic from 1958 to 2002. Daily 500 hPa geopotential height and 1,000 hPa wind anomaly maps are classified following a weather-typing approach to describe the North Atlantic and tropical Atlantic atmospheric dynamics, respectively. The algorithm yields patterns that correspond in the extratropics to the well-known North Atlantic-Europe weather regimes (NAE-WR) accounting for the barotropic dynamics, and in the tropics to wind classes (T-WC) representing the alteration of the trades. 10-m wind and 2-m temperature (T2) anomaly composites derived from regime/wind class occurrence are indicative of strong relationships between daily large-scale atmospheric circulation and ocean surface over the entire Atlantic basin. High temporal correlation values are obtained basin-wide at low frequency between the observed fields and their reconstruction by multiple linear regressions with the frequencies of occurrence of both NAE-WR and T-WC used as sole predictors. Additional multiple linear regressions also emphasize the importance of accounting for the strength of the daily anomalous atmospheric circulation estimated by the combined distances to all regimes centroids in order to reproduce the daily to interannual variability of the Atlantic ocean. We show that for most of the North Atlantic basin the occurrence of NAE-WR generally sets the sign of the ocean surface anomaly for a given day, and that the inter-regime distances are valuable predictors for the magnitude of that anomaly. Finally, we provide evidence that a large fraction of the low-frequency trends in the Atlantic observed at the surface over the last 50 years can be traced back, except for T2, to changes in occurrence of tropical and extratropical weather classes. All together, our

  6. Accuracy and benefits of 3D bone surface modelling: a comparison of two methods of surface data acquisition reconstructed by laser scanning and computed tomography outputs

    Czech Academy of Sciences Publication Activity Database

    Brzobohatá, Hana; Prokop, J.; Horák, M.; Jančárek, A.; Velemínská, J.

    2012-01-01

    Roč. 36, č. 3 (2012), s. 801-806 ISSN 0350-6134 Grant - others:GA UK(CZ) 613012 Keywords : frontal bone * three-dimensional imaging * laser scanning * surface registration Subject RIV: AC - Archeology, Anthropology, Ethnology Impact factor: 0.414, year: 2012

  7. Geomorphometric reconstruction of post-eruptive surfaces of the Virunga Volcanic Province (East African Rift), constraint of erosion ratio and relative chronology

    Science.gov (United States)

    Lahitte, Pierre; Poppe, Sam; Kervyn, Matthieu

    2016-04-01

    Quaternary volcanic landforms result from a complex evolution, involving volcanic constructional events and destructive ones by collapses and long-term erosion. Quantification, by morphometric approaches, of the evolution through time of the volcano shape allows the estimation of relative ages between volcanoes sharing the same climate and eruptive conditions. We apply such method to six volcanoes of the Virunga Volcanic Province in the western branch of the East African Rift Valley that still has rare geochronological constraints. As they have comparable sizes, volcanic history and erupted products, these edifices may have undergone comparable conditions of erosion which justify the deduction of relative chronology from their erosion pattern. Our GIS-based geomorphometric approach, the SHAPEVOLC algorithm, quantifies erupted or dismantled volumes by numerically modeling topographies resulting from the eruptive construction of each volcano. Constraining points are selected by analyses of morphometric properties of each cell of the current DEM, as the loci where the altitude is still representative of the un-eroded volcanic surfaces. A primary elevation surface is firstly adjusted to these constraining points by modeling a first-order pseudo-radial surface defined by: 1. the curve best fitting the concave-upwards volcano profile; 2. the location and elevation of the volcano summit; and 3. the possible eccentricity and azimuth parameters that allow to stretch and contract contours to adjust the shape of the model to the elliptically-shaped surface of the volcano. A second-order surface is next computed by local adjustment of the first-order surface to the constraining points to obtain the definitive primary elevation surface of the considered volcanic construct. Amount of erosion is obtained by summing the difference in elevation between reconstructed surfaces and current ones that allows to establish relative ages of volcanoes. For the 6 studied Virunga volcanoes

  8. Real-time Accurate Surface Reconstruction Pipeline for Vision Guided Planetary Exploration Using Unmanned Ground and Aerial Vehicles

    Science.gov (United States)

    Almeida, Eduardo DeBrito

    2012-01-01

    This report discusses work completed over the summer at the Jet Propulsion Laboratory (JPL), California Institute of Technology. A system is presented to guide ground or aerial unmanned robots using computer vision. The system performs accurate camera calibration, camera pose refinement and surface extraction from images collected by a camera mounted on the vehicle. The application motivating the research is planetary exploration and the vehicles are typically rovers or unmanned aerial vehicles. The information extracted from imagery is used primarily for navigation, as robot location is the same as the camera location and the surfaces represent the terrain that rovers traverse. The processed information must be very accurate and acquired very fast in order to be useful in practice. The main challenge being addressed by this project is to achieve high estimation accuracy and high computation speed simultaneously, a difficult task due to many technical reasons.

  9. Reconstruction of the 1979–2006 Greenland ice sheet surface mass balance using the regional climate model MAR

    Directory of Open Access Journals (Sweden)

    X. Fettweis

    2007-10-01

    Full Text Available Results from a 28-year simulation (1979–2006 over the Greenland ice sheet (GrIS reveal an increase of solid precipitation (+0.4±2.5 km3 yr−2 and run-off (+7.9±3.3 km3 yr−2 of surface meltwater. The net effect of these competing factors is a significant Surface Mass Balance (SMB loss of −7.2±5.1 km3 yr−2. The contribution of changes in the net water vapour flux (+0.02±0.09 km3 yr−2 and rainfall (+0.2±0.2 km3 yr−2 to the SMB variability is negligible. The meltwater supply has increased because the GrIS surface has been warming up +2.4°C since 1979. Sensible heat flux, latent heat flux and net solar radiation have not varied significantly over the last three decades. However, the simulated downward infrared flux has increased by 9.3 W m−2 since 1979. The natural climate variability (e.g. the North Atlantic Oscillation does not explain these changes. The recent global warming, due to the greenhouse gas concentration increase induced by human activities, could be a cause of these changes. The doubling of surface meltwater flux into the ocean over the period 1979–2006 suggests that the overall ice sheet mass balance has been increasingly negative, given the likely meltwater-induced acceleration of outlet glaciers. This study suggests that increased melting overshadows over an increased accumulation in a warming scenario and that the GrIS is likely to keep losing mass in the future. An enduring GrIS melting will probably affect in the future an certain effect on the stability of the thermohaline circulation and the global sea level rise.

  10. Changes in Soil Dissolved Organic Carbon Affect Reconstructed History and Projected Future Trends in Surface Water Acidification

    Czech Academy of Sciences Publication Activity Database

    Hruška, Jakub; Krám, Pavel; Moldan, Filip; Oulehle, Filip; Evans, C. D.; Wright, R. F.; Cosby, B. J.; Kopáček, Jiří

    2014-01-01

    Roč. 225, č. 7 (2014), s. 2015 ISSN 0049-6979 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:67179843 ; RVO:60077344 Keywords : acidification * surface waters * soils * dissolved organic carbon * magic model * preindustrial water chemistry Subject RIV: EH - Ecology, Behaviour; DA - Hydrology ; Limnology (BC-A) Impact factor: 1.554, year: 2014

  11. Dynamic surface electronic reconstruction as symmetry-protected topological orders in topological insulator Bi2Se3

    Science.gov (United States)

    Shu, G. J.; Liou, S. C.; Karna, S. K.; Sankar, R.; Hayashi, M.; Chou, F. C.

    2018-04-01

    The layered narrow-band-gap semiconductor Bi2Se3 is composed of heavy elements with strong spin-orbital coupling, which has been identified both as a good candidate for a thermoelectric material with high thermoelectric figure of merit (Z T ) and as a topological insulator of the Z2 type with a gapless surface band in a Dirac-cone shape. The existence of a conjugated π -bond system on the surface of each Bi2Se3 quintuple layer is proposed based on an extended valence bond model with valence electrons distributed in the hybridized orbitals. Supporting experimental evidence of a two-dimensional (2D) conjugated π -bond system on each quintuple layer of Bi2Se3 is provided using electron energy-loss spectroscopy and electron density mapping through inverse Fourier transform of x-ray diffraction data. Quantum chemistry calculations support the π -bond existence between partially filled 4 pz orbitals of Se via side-to-side orbital overlap positively. The conjugated π -bond system on the surface of each quintuple Bi2Se3 layer is proposed to be similar to that found in graphite (graphene) and responsible for the unique 2D conduction mechanism. The van der Waals (vdW) attractive force between quintuple layers is interpreted to be coming from the antiferroelectrically ordered effective electric dipoles, which are constructed with π -bond trimer pairs on Se layers across the vdW gap of minimized Coulomb repulsion.

  12. A Comparative Study of the Therapeutic Potential of Mesenchymal Stem Cells and Limbal Epithelial Stem Cells for Ocular Surface Reconstruction

    Czech Academy of Sciences Publication Activity Database

    Holáň, Vladimír; Trošan, Peter; Čejka, Čestmír; Javorková, Eliška; Zajícová, Alena; Heřmánková, Barbora; Chudíčková, Milada; Čejková, Jitka

    2015-01-01

    Roč. 4, č. 9 (2015), s. 1052-1063 ISSN 2157-6564 R&D Projects: GA ČR(CZ) GA14-12580S; GA MZd NT14102; GA MŠk(CZ) LO1309; GA MŠk(CZ) ED1.1.00/02.0109 Institutional support: RVO:68378041 Keywords : limbal stem cells * mesenchymal stem cells * alkali-injured ocular surface * corneal regeneration * stem cell-based therapy Subject RIV: FF - HEENT, Dentistry Impact factor: 4.247, year: 2015

  13. LEED-IV study of the rutile TiO2(110)-1x2 surface with a Ti-interstitial added-row reconstruction

    International Nuclear Information System (INIS)

    Blanco-Rey, M.; Mendez, J.; Lopez, M. F.; Roman, E.; Martin-Gago, J. A.; Andres, P. L. de; Abad, J.; Rogero, C.

    2007-01-01

    Upon sputtering and annealing in UHV at ∼1000 K, the rutile TiO 2 (110) surface undergoes a 1x1→1x2 phase transition. The resulting 1x2 surface is Ti rich, formed by strands of double Ti rows as seen on scanning tunneling microscopic images, but its detailed structure and composition have been subject to debate in the literature for years. Recently, Park et al. [Phys. Rev. Lett. 96, 226105 (2006)] have proposed a model where Ti atoms are located on interstitial sites with Ti 2 O stoichiometry. This model, when it is analyzed using LEED-IV data [Phys. Rev. Lett. 96, 0055502 (2006)], does not yield an agreement between theory and experiment as good as the previous best fit for Onishi and Iwasawa's model for the long-range 1x2 reconstruction. Therefore, the Ti 2 O 3 added row is the preferred one from the point of view low-energy electron diffraction

  14. Global water balances reconstructed by multi-model offline simulations of land surface models under GSWP3 (Invited)

    Science.gov (United States)

    Oki, T.; KIM, H.; Ferguson, C. R.; Dirmeyer, P.; Seneviratne, S. I.

    2013-12-01

    As the climate warms, the frequency and severity of flood and drought events is projected to increase. Understanding the role that the land surface will play in reinforcing or diminishing these extremes at regional scales will become critical. In fact, the current development path from atmospheric (GCM) to coupled atmosphere-ocean (AOGCM) to fully-coupled dynamic earth system models (ESMs) has brought new awareness to the climate modeling community of the abundance of uncertainty in land surface parameterizations. One way to test the representativeness of a land surface scheme is to do so in off-line (uncoupled) mode with controlled, high quality meteorological forcing. When multiple land schemes are run in-parallel (with the same forcing data), an inter-comparison of their outputs can provide the basis for model confidence estimates and future model refinements. In 2003, the Global Soil Wetness Project Phase 2 (GSWP2) provided the first global multi-model analysis of land surface state variables and fluxes. It spanned the decade of 1986-1995. While it was state-of-the art at the time, physical schemes have since been enhanced, a number of additional processes and components in the water-energy-eco-systems nexus can now be simulated, , and the availability of global, long-term observationally-based datasets that can be used for forcing and validating models has grown. Today, the data exists to support century-scale off-line experiments. The ongoing follow-on to GSWP2, named GSWP3, capitalizes on these new feasibilities and model functionalities. The project's cornerstone is its century-scale (1901-2010), 3-hourly, 0.5° meteorological forcing dataset that has been dynamically downscaled from the Twentieth Century Reanalysis and bias-corrected using monthly Climate Research Unit (CRU) temperature and Global Precipitation Climatology Centre (GPCC) precipitation data. However, GSWP3 also has an important long-term future climate component that spans the 21st century

  15. MODIS Land Surface Temperature time series reconstruction with Open Source GIS: A new quality of temperature based ecological indicators in complex terrain (Invited)

    Science.gov (United States)

    Neteler, M.

    2009-12-01

    In complex terrain like the Central European Alps, meteorological stations and ground surveys are usually sparsely and/or irregularly distributed and often favor agricultural areas. The application of traditional geospatial interpolation methods in complex terrain remains challenging and difficult to optimize. An alternative data source is remote sensing: high temporal resolution satellite data are continuously gaining interest since these data are intrinsically spatialized: continuous field of observations is obtained with this tool instead of point data. The increasing data availability suggests using these time series as surrogate to certain measures from meteorological stations, especially for temperature and related derivatives. The Terra and Aqua satellites with the Moderate Resolution Imaging Spectroradiometer (MODIS) provide four Earth coverages per day at various resolutions. We analyzed 8 years (2000 to 2008) of daily land surface temperature (LST) data from MODIS in an area located in the Southern European Alps. A method was developed to reconstruct incomplete maps (cloud coverage, invalid pixels) based on image statistics and on a model that includes additional GIS layers. The original LST map resolution of 1000m could be improved to 200m in this process which renders the resulting LST maps applicable at regional scales. We propose the use of these reconstructed daily LST time series as surrogate to meteorological observations especially in the area of epidemiological modeling where data are typically aggregated to decadal indicators. From these daily LST map series, derivable indicators include: 1) temperatures minima, means and maxima for annual/monthly/decadal periods; 2) unusual hot summers;3) the calculation of growing degree days, and 4) spring temperature increase or autumnal temperature decrease. Since more than 8 years of MODIS LST data are available today, even preliminary gradients can be extracted to assess multi-annual temperature trends

  16. Ocular Surface Reconstruction with Cultivated Limbal Epithelial Cells in Limbal Stem Cell Deficiency: One-year Follow-up Results

    Directory of Open Access Journals (Sweden)

    İsmet Durak

    2012-05-01

    Full Text Available Pur po se: To evaluate the 1-year follow-up results of cultivated limbal epithelial cell (CLEC transplantation in unilateral limbal stem cell deficiency (LSCD. Ma te ri al and Met hod: One-year follow-up results of five unilateral LSCD patients who had undergone CLEC transplantation were evaluated. Parameters for this evaluation were: fluorescein staining of ocular surface, corneal vascularization and status of epithelium with slit lamp, and visual acuity. 1.5-mm limbal biopsy was performed from the superior limbus of the healthy eyes, broke into two equal pieces, expanded on human amniotic membrane (hAM and inserts for 14 days until getting 20 mm in size. CLECs on hAMs were used directly, and cells on inserts were usedafter detachment procedure. The symblepharon and pannus tissues were removed, superficial keratectomy was performed. CLEC on hAMs were transplanted with the epithelial side up onto the bare corneal stroma, sutured to the conjunctiva with 10-0 nylon sutures. Free CLEC layer from insert was placed on hAM as a second layer, additional hAM was used as a protective layer all over other tissues. Re sults: Median age was 44.4 years (14-71. The etiology was chemical burn in all patients. Median duration of symptoms was 10 years (2-18, median follow-up period was 12.6 (12-12.5 months. Preoperative best corrected visual acuities (BCVA were light perception in three patients, counting fingers at 50 cm in one patient and 3/10 in one patient. Visions were improved in all patients. Postoperative BCVA 12 months after the surgery were between counting fingers at 3 meters to 6/10. There was a temporary hemorrhage between the two layers of hAMs in one patient at the early postoperative period. Peripheral corneal vascularization has occurred in three patients, in patient corneal vascularization has reached to the paracentral area. Dis cus si on: CLEC transplantation is an efficient treatment option for unilateral LSCD in mid-long term. (Turk J

  17. A walk by the river: three-dimensional reconstruction of surface sedimentology and topography using wearable laser scanning

    Science.gov (United States)

    Williams, R.; Lamy, M. L.; Stott, E.; Maniatis, G.

    2017-12-01

    In the last two decades, quantification of fluvial topography has been transformed by a number of geomatics technologies that have enabled the acquisition of data with unprecedented spatial resolution. Hyperscale surveys with spatial extents of <1 km2 have been widely demonstrated, by means of Terrestrial Laser Scanning (TLS) and Structure-from-Motion (SfM) photogrammetry. Recent advances in the development and integration of GNSS, IMU, lightweight laser scanning and SLAM technologies are now resulting in the emergence of wearable, mobile laser scanning systems that have the potential to increase data acquisition and processing rates by 1-2 orders of magnitude compared to TLS/SfM, and thus challenge the recent dominance of these two geomatics technologies. In this study we describe the methods and results of a comparison between a wearable laser scanning survey, using a Leica Pegasus Backpack, and a multi-station static TLS survey, using a Riegl VZ-1000 scanner. The evaluation is undertaken on a 600 m long reach of the braided River Feshie, Scotland, using data acquired in June 2017. Comparison between the DEMs produced from static and mobile laser scanning, across non-vegetated areas, revealed a Mean Error (ME) of -0.002 m and a Standard Deviation Error (SDE) of 0.109 m. Comparison to 100 independent check point resulted in a similar ME and SDE for static (ME = 0.061m; SDE = 0.030 m) and mobile (ME = 0.044 m; SDE = 0.029 m) laser scanning. Empirical relationships between sub-metre topographic variability and median sediment grain size (10-100 mm), across 14 grid-by-number samples, were similar and demonstrate that surface roughness from wearable laser scanning can be used to derive reach-scale maps of median grain size. These results demonstrate that wearable laser scanning generates hyperscale topographic models that are comparable in quality to more time-consuming multi-station TLS setups. Wearable laser scanning is likely to be commonly adopted for fluvial

  18. GLAM: Glycogen-derived Lactate Absorption Map for visual analysis of dense and sparse surface reconstructions of rodent brain structures on desktop systems and virtual environments

    KAUST Repository

    Agus, Marco; Boges, Daniya; Gagnon, Nicolas; Magistretti, Pierre J.; Hadwiger, Markus; Cali, Corrado

    2018-01-01

    Human brain accounts for about one hundred billion neurons, but they cannot work properly without ultrastructural and metabolic support. For this reason, mammalian brains host another type of cells called “glial cells”, whose role is to maintain proper conditions for efficient neuronal function. One type of glial cell, astrocytes, are involved in particular in the metabolic support of neurons, by feeding them with lactate, one byproduct of glucose metabolism that they can take up from blood vessels, and store it under another form, glycogen granules. These energy-storage molecules, whose morphology resembles to spheres with a diameter ranging 10–80 nanometers roughly, can be easily recognized using electron microscopy, the only technique whose resolution is high enough to resolve them. Understanding and quantifying their distribution is of particular relevance for neuroscientists, in order to understand where and when neurons use energy under this form. To answer this question, we developed a visualization technique, dubbed GLAM (Glycogen-derived Lactate Absorption Map), and customized for the analysis of the interaction of astrocytic glycogen on surrounding neurites in order to formulate hypotheses on the energy absorption mechanisms. The method integrates high-resolution surface reconstruction of neurites, astrocytes, and the energy sources in form of glycogen granules from different automated serial electron microscopy methods, like focused ion beam scanning electron microscopy (FIB-SEM) or serial block face electron microscopy (SBEM), together with an absorption map computed as a radiance transfer mechanism. The resulting visual representation provides an immediate and comprehensible illustration of the areas in which the probability of lactate shuttling is higher. The computed dataset can be then explored and quantified in a 3D space, either using 3D modeling software or virtual reality environments. Domain scientists have evaluated the technique by

  19. GLAM: Glycogen-derived Lactate Absorption Map for visual analysis of dense and sparse surface reconstructions of rodent brain structures on desktop systems and virtual environments

    KAUST Repository

    Agus, Marco

    2018-05-21

    Human brain accounts for about one hundred billion neurons, but they cannot work properly without ultrastructural and metabolic support. For this reason, mammalian brains host another type of cells called “glial cells”, whose role is to maintain proper conditions for efficient neuronal function. One type of glial cell, astrocytes, are involved in particular in the metabolic support of neurons, by feeding them with lactate, one byproduct of glucose metabolism that they can take up from blood vessels, and store it under another form, glycogen granules. These energy-storage molecules, whose morphology resembles to spheres with a diameter ranging 10–80 nanometers roughly, can be easily recognized using electron microscopy, the only technique whose resolution is high enough to resolve them. Understanding and quantifying their distribution is of particular relevance for neuroscientists, in order to understand where and when neurons use energy under this form. To answer this question, we developed a visualization technique, dubbed GLAM (Glycogen-derived Lactate Absorption Map), and customized for the analysis of the interaction of astrocytic glycogen on surrounding neurites in order to formulate hypotheses on the energy absorption mechanisms. The method integrates high-resolution surface reconstruction of neurites, astrocytes, and the energy sources in form of glycogen granules from different automated serial electron microscopy methods, like focused ion beam scanning electron microscopy (FIB-SEM) or serial block face electron microscopy (SBEM), together with an absorption map computed as a radiance transfer mechanism. The resulting visual representation provides an immediate and comprehensible illustration of the areas in which the probability of lactate shuttling is higher. The computed dataset can be then explored and quantified in a 3D space, either using 3D modeling software or virtual reality environments. Domain scientists have evaluated the technique by

  20. Climate Reconstructions

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The NOAA Paleoclimatology Program archives reconstructions of past climatic conditions derived from paleoclimate proxies, in addition to the Program's large holdings...

  1. Markov Random Field Surface Reconstruction

    DEFF Research Database (Denmark)

    Paulsen, Rasmus Reinhold; Bærentzen, Jakob Andreas; Larsen, Rasmus

    2010-01-01

    ) and knowledge about data (the observation model) in an orthogonal fashion. Local models that account for both scene-specific knowledge and physical properties of the scanning device are described. Furthermore, how the optimal distance field can be computed is demonstrated using conjugate gradients, sparse...

  2. Vaginal reconstruction

    International Nuclear Information System (INIS)

    Lesavoy, M.A.

    1985-01-01

    Vaginal reconstruction can be an uncomplicated and straightforward procedure when attention to detail is maintained. The Abbe-McIndoe procedure of lining the neovaginal canal with split-thickness skin grafts has become standard. The use of the inflatable Heyer-Schulte vaginal stent provides comfort to the patient and ease to the surgeon in maintaining approximation of the skin graft. For large vaginal and perineal defects, myocutaneous flaps such as the gracilis island have been extremely useful for correction of radiation-damaged tissue of the perineum or for the reconstruction of large ablative defects. Minimal morbidity and scarring ensue because the donor site can be closed primarily. With all vaginal reconstruction, a compliant patient is a necessity. The patient must wear a vaginal obturator for a minimum of 3 to 6 months postoperatively and is encouraged to use intercourse as an excellent obturator. In general, vaginal reconstruction can be an extremely gratifying procedure for both the functional and emotional well-being of patients

  3. ACL Reconstruction

    Science.gov (United States)

    ... in moderate exercise and recreational activities, or play sports that put less stress on the knees. ACL reconstruction is generally recommended if: You're an athlete and want to continue in your sport, especially if the sport involves jumping, cutting or ...

  4. Maxillary reconstruction

    Directory of Open Access Journals (Sweden)

    Brown James

    2007-12-01

    Full Text Available This article aims to discuss the various defects that occur with maxillectomy with a full review of the literature and discussion of the advantages and disadvantages of the various techniques described. Reconstruction of the maxilla can be relatively simple for the standard low maxillectomy that does not involve the orbital floor (Class 2. In this situation the structure of the face is less damaged and the there are multiple reconstructive options for the restoration of the maxilla and dental alveolus. If the maxillectomy includes the orbit (Class 4 then problems involving the eye (enopthalmos, orbital dystopia, ectropion and diplopia are avoided which simplifies the reconstruction. Most controversy is associated with the maxillectomy that involves the orbital floor and dental alveolus (Class 3. A case is made for the use of the iliac crest with internal oblique as an ideal option but there are other methods, which may provide a similar result. A multidisciplinary approach to these patients is emphasised which should include a prosthodontist with a special expertise for these defects.

  5. A Novel 2D Image Compression Algorithm Based on Two Levels DWT and DCT Transforms with Enhanced Minimize-Matrix-Size Algorithm for High Resolution Structured Light 3D Surface Reconstruction

    Science.gov (United States)

    Siddeq, M. M.; Rodrigues, M. A.

    2015-09-01

    Image compression techniques are widely used on 2D image 2D video 3D images and 3D video. There are many types of compression techniques and among the most popular are JPEG and JPEG2000. In this research, we introduce a new compression method based on applying a two level discrete cosine transform (DCT) and a two level discrete wavelet transform (DWT) in connection with novel compression steps for high-resolution images. The proposed image compression algorithm consists of four steps. (1) Transform an image by a two level DWT followed by a DCT to produce two matrices: DC- and AC-Matrix, or low and high frequency matrix, respectively, (2) apply a second level DCT on the DC-Matrix to generate two arrays, namely nonzero-array and zero-array, (3) apply the Minimize-Matrix-Size algorithm to the AC-Matrix and to the other high-frequencies generated by the second level DWT, (4) apply arithmetic coding to the output of previous steps. A novel decompression algorithm, Fast-Match-Search algorithm (FMS), is used to reconstruct all high-frequency matrices. The FMS-algorithm computes all compressed data probabilities by using a table of data, and then using a binary search algorithm for finding decompressed data inside the table. Thereafter, all decoded DC-values with the decoded AC-coefficients are combined in one matrix followed by inverse two levels DCT with two levels DWT. The technique is tested by compression and reconstruction of 3D surface patches. Additionally, this technique is compared with JPEG and JPEG2000 algorithm through 2D and 3D root-mean-square-error following reconstruction. The results demonstrate that the proposed compression method has better visual properties than JPEG and JPEG2000 and is able to more accurately reconstruct surface patches in 3D.

  6. Position reconstruction in LUX

    Science.gov (United States)

    Akerib, D. S.; Alsum, S.; Araújo, H. M.; Bai, X.; Bailey, A. J.; Balajthy, J.; Beltrame, P.; Bernard, E. P.; Bernstein, A.; Biesiadzinski, T. P.; Boulton, E. M.; Brás, P.; Byram, D.; Cahn, S. B.; Carmona-Benitez, M. C.; Chan, C.; Currie, A.; Cutter, J. E.; Davison, T. J. R.; Dobi, A.; Druszkiewicz, E.; Edwards, B. N.; Fallon, S. R.; Fan, A.; Fiorucci, S.; Gaitskell, R. J.; Genovesi, J.; Ghag, C.; Gilchriese, M. G. D.; Hall, C. R.; Hanhardt, M.; Haselschwardt, S. J.; Hertel, S. A.; Hogan, D. P.; Horn, M.; Huang, D. Q.; Ignarra, C. M.; Jacobsen, R. G.; Ji, W.; Kamdin, K.; Kazkaz, K.; Khaitan, D.; Knoche, R.; Larsen, N. A.; Lenardo, B. G.; Lesko, K. T.; Lindote, A.; Lopes, M. I.; Manalaysay, A.; Mannino, R. L.; Marzioni, M. F.; McKinsey, D. N.; Mei, D.-M.; Mock, J.; Moongweluwan, M.; Morad, J. A.; Murphy, A. St. J.; Nehrkorn, C.; Nelson, H. N.; Neves, F.; O'Sullivan, K.; Oliver-Mallory, K. C.; Palladino, K. J.; Pease, E. K.; Rhyne, C.; Shaw, S.; Shutt, T. A.; Silva, C.; Solmaz, M.; Solovov, V. N.; Sorensen, P.; Sumner, T. J.; Szydagis, M.; Taylor, D. J.; Taylor, W. C.; Tennyson, B. P.; Terman, P. A.; Tiedt, D. R.; To, W. H.; Tripathi, M.; Tvrznikova, L.; Uvarov, S.; Velan, V.; Verbus, J. R.; Webb, R. C.; White, J. T.; Whitis, T. J.; Witherell, M. S.; Wolfs, F. L. H.; Xu, J.; Yazdani, K.; Young, S. K.; Zhang, C.

    2018-02-01

    The (x, y) position reconstruction method used in the analysis of the complete exposure of the Large Underground Xenon (LUX) experiment is presented. The algorithm is based on a statistical test that makes use of an iterative method to recover the photomultiplier tube (PMT) light response directly from the calibration data. The light response functions make use of a two dimensional functional form to account for the photons reflected on the inner walls of the detector. To increase the resolution for small pulses, a photon counting technique was employed to describe the response of the PMTs. The reconstruction was assessed with calibration data including 83mKr (releasing a total energy of 41.5 keV) and 3H (β- with Q = 18.6 keV) decays, and a deuterium-deuterium (D-D) neutron beam (2.45 MeV) . Within the detector's fiducial volume, the reconstruction has achieved an (x, y) position uncertainty of σ = 0.82 cm and σ = 0.17 cm for events of only 200 and 4,000 detected electroluminescence photons respectively. Such signals are associated with electron recoils of energies ~0.25 keV and ~10 keV, respectively. The reconstructed position of the smallest events with a single electron emitted from the liquid surface (22 detected photons) has a horizontal (x, y) uncertainty of 2.13 cm.

  7. Surface reconstruction of titania with g-C3N4 and Ag for promoting efficient electrons migration and enhanced visible light photocatalysis

    International Nuclear Information System (INIS)

    Leong, Kah Hon; Liu, Sze Ling; Sim, Lan Ching; Saravanan, Pichiah; Jang, Min; Ibrahim, Shaliza

    2015-01-01

    Graphical abstract: - Highlights: • Visible light responsive TiO 2 was reconstructed with g-C 3 N 4 and Ag by simple route. • g-C 3 N 4 simultaneously promoted electrons migration and tuned energy gap of TiO 2 . • Ag facilitated electron junction and enhanced the visible light through SPR. • Reconstructed TiO 2 showed an excellent photocatalytic performance by removing AMX. - Abstract: The developments of heterogeneous photocatalysts are one among the competent reconstruction approach to enrich the visible light responsiveness of conventional TiO 2 . In the present work the TiO 2 was reconstructed with graphitic carbon nitride (g-C 3 N 4 ) and silver (Ag) to form a ternary (g-C 3 N 4 )–Ag/TiO 2 . The graphitic carbon nitride an intriguing material was prepared through a facile pyrolysis by using urea as a precursor. The silver (Ag) that plays a role as electron-conduction mobiliser in the ternary was synthesised through solar mediated photodeposition method. The synthesised ternary composite characteristics were thoroughly investigated through various physical and chemical analyses. The presence of g-C 3 N 4 in the ternary photocatalysts promoted the formation of interface between the Ag/TiO 2 and g-C 3 N 4 and stimulated the electron transfer between them. These electrons migration acknowledged by the synergic effect prolonged the lifetime of charge carriers. The g-C 3 N 4 also significantly tuned the energy band of conventional TiO 2 . The prepared ternary exhibited significantly high visible light photocatalytic performance by degrading Amoxicillin (AMX) a poor photosensitising pollutant at highest rate.

  8. Surface reconstruction of titania with g-C{sub 3}N{sub 4} and Ag for promoting efficient electrons migration and enhanced visible light photocatalysis

    Energy Technology Data Exchange (ETDEWEB)

    Leong, Kah Hon; Liu, Sze Ling [Environmental Engineering Laboratory, Department of Civil Engineering, Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur (Malaysia); Sim, Lan Ching [Faculty of Engineering and Green Technology, Universiti Tunku Abdul Rahman, Jalan Universiti, Bandar Barat, 31900 Kampar, Perak (Malaysia); Saravanan, Pichiah, E-mail: saravananpichiah@um.edu.my [Environmental Engineering Laboratory, Department of Civil Engineering, Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur (Malaysia); Nanotechnology & Catalysis Research Center (NANOCAT), University of Malaya, 50603 Kuala Lumpur (Malaysia); Jang, Min [Environmental Engineering Laboratory, Department of Civil Engineering, Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur (Malaysia); Nanotechnology & Catalysis Research Center (NANOCAT), University of Malaya, 50603 Kuala Lumpur (Malaysia); Ibrahim, Shaliza [Environmental Engineering Laboratory, Department of Civil Engineering, Faculty of Engineering, University of Malaya, 50603 Kuala Lumpur (Malaysia)

    2015-12-15

    Graphical abstract: - Highlights: • Visible light responsive TiO{sub 2} was reconstructed with g-C{sub 3}N{sub 4} and Ag by simple route. • g-C{sub 3}N{sub 4} simultaneously promoted electrons migration and tuned energy gap of TiO{sub 2}. • Ag facilitated electron junction and enhanced the visible light through SPR. • Reconstructed TiO{sub 2} showed an excellent photocatalytic performance by removing AMX. - Abstract: The developments of heterogeneous photocatalysts are one among the competent reconstruction approach to enrich the visible light responsiveness of conventional TiO{sub 2}. In the present work the TiO{sub 2} was reconstructed with graphitic carbon nitride (g-C{sub 3}N{sub 4}) and silver (Ag) to form a ternary (g-C{sub 3}N{sub 4})–Ag/TiO{sub 2}. The graphitic carbon nitride an intriguing material was prepared through a facile pyrolysis by using urea as a precursor. The silver (Ag) that plays a role as electron-conduction mobiliser in the ternary was synthesised through solar mediated photodeposition method. The synthesised ternary composite characteristics were thoroughly investigated through various physical and chemical analyses. The presence of g-C{sub 3}N{sub 4} in the ternary photocatalysts promoted the formation of interface between the Ag/TiO{sub 2} and g-C{sub 3}N{sub 4} and stimulated the electron transfer between them. These electrons migration acknowledged by the synergic effect prolonged the lifetime of charge carriers. The g-C{sub 3}N{sub 4} also significantly tuned the energy band of conventional TiO{sub 2}. The prepared ternary exhibited significantly high visible light photocatalytic performance by degrading Amoxicillin (AMX) a poor photosensitising pollutant at highest rate.

  9. H2S interaction with Cu(100)-(2 √2 × √2 )R45°-O: Formation of a metastable ‖05 52sulfur surface reconstruction

    DEFF Research Database (Denmark)

    Colaianni, M. L.; Syhler, P.; Chorkendorff, Ib

    1995-01-01

    This paper utilizes scanning tunneling microscopy, low-energy electron diffraction, Auger-electron spectroscopy, and temperature-programmed desorption to examine a metastable \\(52)(05)\\-S structure which forms after the interface reaction of H2S with a Cu(100)-(2 root (2) over bar X root (2) over....... Heating the \\(52)(05)\\-S surface to temperatures above 600 K converts this structure to the thermally stable Cu(100)rootX root)R14 degrees-S (i.e., \\((1) over bar 4)(41)\\-S overlayer. A model for the metastable \\(52)(05)\\-S reconstruction is proposed....

  10. PET reconstruction

    International Nuclear Information System (INIS)

    O'Sullivan, F.; Pawitan, Y.; Harrison, R.L.; Lewellen, T.K.

    1990-01-01

    In statistical terms, filtered backprojection can be viewed as smoothed Least Squares (LS). In this paper, the authors report on improvement in LS resolution by: incorporating locally adaptive smoothers, imposing positivity and using statistical methods for optimal selection of the resolution parameter. The resulting algorithm has high computational efficiency relative to more elaborate Maximum Likelihood (ML) type techniques (i.e. EM with sieves). Practical aspects of the procedure are discussed in the context of PET and illustrations with computer simulated and real tomograph data are presented. The relative recovery coefficients for a 9mm sphere in a computer simulated hot-spot phantom range from .3 to .6 when the number of counts ranges from 10,000 to 640,000 respectively. The authors will also present results illustrating the relative efficacy of ML and LS reconstruction techniques

  11. Literature and data review for the surface-water pathway: Columbia River and adjacent coastal areas. Hanford Environmental Dose Reconstruction Project

    Energy Technology Data Exchange (ETDEWEB)

    Walters, W.H.; Dirkes, R.L.; Napier, B.A.

    1992-11-01

    As part of the Hanford Environmental Dose Reconstruction (HEDR) Project, Battelle, Pacific Northwest Laboratories reviewed literature and data on radionuclide concentrations and distribution in the water, sediment, and biota of the Columbia River and adjacent coastal areas. Over 600 documents were reviewed including Hanford reports, reports by offsite agencies, journal articles, and graduate theses. Radionuclide concentration data were used in preliminary estimates of individual dose for the period 1964 through 1966. This report summarizes the literature and database reviews and the results of the preliminary dose estimates.

  12. Critical Doping for the Onset of Fermi-Surface Reconstruction by Charge-Density-Wave Order in the Cuprate Superconductor La_{2-x}Sr_{x}CuO_{4}

    Directory of Open Access Journals (Sweden)

    S. Badoux

    2016-04-01

    Full Text Available The Seebeck coefficient S of the cuprate superconductor La_{2-x}Sr_{x}CuO_{4} (LSCO was measured in magnetic fields large enough to access the normal state at low temperatures, for a range of Sr concentrations from x=0.07 to x=0.15. For x=0.11, 0.12, 0.125, and 0.13, S/T decreases upon cooling to become negative at low temperatures. The same behavior is observed in the Hall coefficient R_{H}(T. In analogy with other hole-doped cuprates at similar hole concentrations p, the negative S and R_{H} show that the Fermi surface of LSCO undergoes a reconstruction caused by the onset of charge-density-wave modulations. Such modulations have indeed been detected in LSCO by x-ray diffraction in precisely the same doping range. Our data show that in LSCO this Fermi-surface reconstruction is confined to 0.085

  13. Breast Reconstruction After Mastectomy

    Science.gov (United States)

    ... Cancer Prevention Genetics of Breast & Gynecologic Cancers Breast Cancer Screening Research Breast Reconstruction After Mastectomy On This Page What is breast reconstruction? How do surgeons use implants to reconstruct a woman’s breast? How do surgeons ...

  14. Breast reconstruction - implants

    Science.gov (United States)

    Breast implants surgery; Mastectomy - breast reconstruction with implants; Breast cancer - breast reconstruction with implants ... harder to find a tumor if your breast cancer comes back. Getting breast implants does not take as long as breast reconstruction ...

  15. Seismic interferometry : Reconstructing the earth's reflection response

    NARCIS (Netherlands)

    Draganov, D.S.; Wapenaar, C.P.A.; Thorbecke, J.W.

    2006-01-01

    In 1968, Jon Claerbout showed that the reflection response of a 1D acoustic medium can be reconstructed by autocorrelating the transmission response. Since then, several authors have derived relationships for reconstructing Green's functions at the surface, using crosscorrelations of (noise)

  16. Glacial evolution in King George and Livingston Islands (Antarctica) since the Last Glacial Maximum based on cosmogenic nuclide dating and glacier surface reconstruction - CRONOANTAR project

    Science.gov (United States)

    Ruiz Fernández, Jesús; Oliva, Marc; Fernández Menéndez, Susana del Carmen; García Hernández, Cristina; Menéndez Duarte, Rosa Ana; Pellitero Ondicol, Ramón; Pérez Alberti, Augusto; Schimmelpfennig, Irene

    2017-04-01

    CRONOANTAR brings together researchers from Spain, Portugal, France and United Kingdom with the objective of spatially and temporally reconstruct the deglaciation process at the two largest islands in the South Shetlands Archipelago (Maritime Antarctica), since the Global Last Glacial Maximum. Glacier retreat in polar areas has major implications at a local, regional and even planetary scale. Global average sea level rise is the most obvious and socio-economically relevant, but there are others such as the arrival of new fauna to deglaciated areas, plant colonisation or permafrost formation and degradation. This project will study the ice-free areas in Byers and Hurd peninsulas (Livingston Island) and Fildes and Potter peninsulas (King George Island). Ice-cap glacier retreat chronology will be revealed by the use of cosmogenic isotopes (mainly 36Cl) on glacially originated sedimentary and erosive records. Cosmogenic dating will be complemented by other dating methods (C14 and OSL), which will permit the validation of these methods in regions with cold-based glaciers. Given the geomorphological evidences and the obtained ages, a deglaciation calendar will be proposed and we will use a GIS methodology to reconstruct the glacier extent and the ice thickness. The results emerging from this project will allow to assess whether the high glacier retreat rates observed during the last decades were registered in the past, or if they are conversely the consequence (and evidence) of the Global Change in Antarctica. Acknowledgements This work has been funded by the Spanish Ministry of Economy, Industry and Competitiveness (Reference: CTM2016-77878-P).

  17. VIRTOPSY--scientific documentation, reconstruction and animation in forensic: individual and real 3D data based geo-metric approach including optical body/object surface and radiological CT/MRI scanning.

    Science.gov (United States)

    Thali, Michael J; Braun, Marcel; Buck, Ursula; Aghayev, Emin; Jackowski, Christian; Vock, Peter; Sonnenschein, Martin; Dirnhofer, Richard

    2005-03-01

    Until today, most of the documentation of forensic relevant medical findings is limited to traditional 2D photography, 2D conventional radiographs, sketches and verbal description. There are still some limitations of the classic documentation in forensic science especially if a 3D documentation is necessary. The goal of this paper is to demonstrate new 3D real data based geo-metric technology approaches. This paper present approaches to a 3D geo-metric documentation of injuries on the body surface and internal injuries in the living and deceased cases. Using modern imaging methods such as photogrammetry, optical surface and radiological CT/MRI scanning in combination it could be demonstrated that a real, full 3D data based individual documentation of the body surface and internal structures is possible in a non-invasive and non-destructive manner. Using the data merging/fusing and animation possibilities, it is possible to answer reconstructive questions of the dynamic development of patterned injuries (morphologic imprints) and to evaluate the possibility, that they are matchable or linkable to suspected injury-causing instruments. For the first time, to our knowledge, the method of optical and radiological 3D scanning was used to document the forensic relevant injuries of human body in combination with vehicle damages. By this complementary documentation approach, individual forensic real data based analysis and animation were possible linking body injuries to vehicle deformations or damages. These data allow conclusions to be drawn for automobile accident research, optimization of vehicle safety (pedestrian and passenger) and for further development of crash dummies. Real 3D data based documentation opens a new horizon for scientific reconstruction and animation by bringing added value and a real quality improvement in forensic science.

  18. Titanium template for scaphoid reconstruction.

    Science.gov (United States)

    Haefeli, M; Schaefer, D J; Schumacher, R; Müller-Gerbl, M; Honigmann, P

    2015-06-01

    Reconstruction of a non-united scaphoid with a humpback deformity involves resection of the non-union followed by bone grafting and fixation of the fragments. Intraoperative control of the reconstruction is difficult owing to the complex three-dimensional shape of the scaphoid and the other carpal bones overlying the scaphoid on lateral radiographs. We developed a titanium template that fits exactly to the surfaces of the proximal and distal scaphoid poles to define their position relative to each other after resection of the non-union. The templates were designed on three-dimensional computed tomography reconstructions and manufactured using selective laser melting technology. Ten conserved human wrists were used to simulate the reconstruction. The achieved precision measured as the deviation of the surface of the reconstructed scaphoid from its virtual counterpart was good in five cases (maximal difference 1.5 mm), moderate in one case (maximal difference 3 mm) and inadequate in four cases (difference more than 3 mm). The main problems were attributed to the template design and can be avoided by improved pre-operative planning, as shown in a clinical case. © The Author(s) 2014.

  19. Direct measurement of the near-field super resolved focused spot in InSb

    NARCIS (Netherlands)

    Assafrao, A.C.; Wachters, A.J.H.; Verheijen, M.; Nugrowati, A.M.; Pereira, S.F.; Urbach, H.P.; Armand, M.F.; Olivier, S.

    2012-01-01

    Under appropriate laser exposure, a thin film of InSb exhibits a sub-wavelength thermally modified area that can be used to focus light beyond the diffraction limit. This technique, called Super-Resolution Near-Field Structure, is a potential candidate for ultrahigh density optical data storage and

  20. Three-dimensional super-resolved live cell imaging through polarized multi-angle TIRF.

    Science.gov (United States)

    Zheng, Cheng; Zhao, Guangyuan; Liu, Wenjie; Chen, Youhua; Zhang, Zhimin; Jin, Luhong; Xu, Yingke; Kuang, Cuifang; Liu, Xu

    2018-04-01

    Measuring three-dimensional nanoscale cellular structures is challenging, especially when the structure is dynamic. Owing to the informative total internal reflection fluorescence (TIRF) imaging under varied illumination angles, multi-angle (MA) TIRF has been examined to offer a nanoscale axial and a subsecond temporal resolution. However, conventional MA-TIRF still performs badly in lateral resolution and fails to characterize the depth image in densely distributed regions. Here, we emphasize the lateral super-resolution in the MA-TIRF, exampled by simply introducing polarization modulation into the illumination procedure. Equipped with a sparsity and accelerated proximal algorithm, we examine a more precise 3D sample structure compared with previous methods, enabling live cell imaging with a temporal resolution of 2 s and recovering high-resolution mitochondria fission and fusion processes. We also shared the recovery program, which is the first open-source recovery code for MA-TIRF, to the best of our knowledge.

  1. Spatio-Temporal Pain Recognition in CNN-based Super-Resolved Facial Images

    DEFF Research Database (Denmark)

    Bellantonio, Marco; Haque, Mohammad Ahsanul; Rodriguez, Pau

    2017-01-01

    Automatic pain detection is a long expected solution to a prevalent medical problem of pain management. This is more relevant when the subject of pain is young children or patients with limited ability to communicate about their pain experience. Computer vision-based analysis of facial pain...

  2. Mapping the nanoscale energetic landscape in conductive polymer films with spatially super-resolved exciton dynamics

    Science.gov (United States)

    Ginsberg, Naomi

    2015-03-01

    The migration of Frenkel excitons, tightly-bound electron-hole pairs, in polymeric organic semiconducting films is critical to the efficiency of bulk heterojunction solar cells. While these materials exhibit a high degree of structural heterogeneity on the nanoscale, traditional measurements of exciton diffusion lengths are performed on bulk samples. Since both the characteristic length scales of structural heterogeneity and the reported bulk diffusion lengths are smaller than the optical diffraction limit, we adapt far-field super-resolution fluorescence imaging to uncover the correlations between the structural and energetic landscapes that the excitons explore.

  3. Optimizing Aesthetic Outcomes in Delayed Breast Reconstruction

    Directory of Open Access Journals (Sweden)

    Wojciech Dec, MD

    2017-08-01

    Conclusions:. Optimal aesthetic results can be achieved with: (1 restoration of breast skin envelope with tissue expansion when possible, (2 optimal positioning of a small skin paddle to be later incorporated entirely into a nipple areola reconstruction when adequate breast skin surface area is present, (3 limiting the reconstructed breast mound to 2 skin tones when large area skin resurfacing is required, (4 increasing breast volume by deepithelializing, not discarding, the inferior mastectomy flap skin, (5 eccentric division of abdominal flaps when an immediate and delayed bilateral breast reconstructions are performed simultaneously; and (6 performing second-stage breast reconstruction revisions and fat grafting.

  4. Evolution Of Lattice Structure And Chemical Composition Of The Surface Reconstruction Layer In Li1.2Ni0.2Mn0.6O2 Cathode Material For Lithium Ion Batteries

    Energy Technology Data Exchange (ETDEWEB)

    Yan, Pengfei; Nie, Anmin; Zheng, Jianming; Zhou, Yungang; Lu, Dongping; Zhang, Xiaofeng; Xu, Rui; Belharouak, Ilias; Zu, Xiaotao; Xiao, Jie; Amine, Khalil; Liu, Jun; Gao, Fei; Shahbazian-Yassar, Reza; Zhang, Jiguang; Wang, Chong M.

    2015-01-14

    Voltage and capacity fading of layer structured lithium and manganese rich (LMR) transition metal oxide is directly related to the structural and composition evolution of the material during the cycling of the battery. However, understanding such evolution at atomic level remains elusive. Based on atomic level structural imaging, elemental mapping of the pristine and cycled samples and density functional theory calculations, it is found that accompanying the hoping of Li ions is the simultaneous migration of Ni ions towards the surface from the bulk lattice, leading to the gradual depletion of Ni in the bulk lattice and thickening of a Ni enriched surface reconstruction layer (SRL). Furthermore, Ni and Mn also exhibit concentration partitions within the thin layer of SRL in the cycled samples where Ni is almost depleted at the very surface of the SRL, indicating the preferential dissolution of Ni ions in the electrolyte. Accompanying the elemental composition evolution, significant structural evolution is also observed and identified as a sequential phase transition of C2/m →I41→Spinel. For the first time, it is found that the surface facet terminated with pure cation is more stable than that with a mixture of cation and anion. These findings firmly established how the elemental species in the lattice of LMR cathode transfer from the bulk lattice to surface layer and further into the electrolyte, clarifying the long standing confusion and debate on the structure and chemistry of the surface layer and their correlation with the voltage fading and capacity decaying of LMR cathode. Therefore, this work provides critical insights for designing of cathode materials with both high capacity and voltage stability during cycling.

  5. Adsorbate-induced facetting reconstruction and self-organized domain patterning of vicinal Ag(111) surfaces; Adsorbatinduzierte richtungsabhaengige Facettierung und selbstorganisierte Domaenen-Musterbildung auf vizinalen Ag(111)-Oberflaechen

    Energy Technology Data Exchange (ETDEWEB)

    Schmitt, Stefan

    2007-02-05

    This thesis investigates structural aspects of adsorbate-induced facetting of vicinal Ag(111) surfaces. It is mainly based on scanning tunneling microscope (STM) and low energy electron diffraction (LEED) experiments performed under UHV conditions. The planar dye-molecule perylene-3,4,9,10-tetracarboxilicacid-dianhydride (PTCDA) adsorbs preferentially at the step edges of the 8.5 Ag(111) vicinal surfaces used in the experiments. It causes a facetting reconstruction by the formation of (111) terraces and facets with a high step density. Moreover, two distinct preferential inclinations of facets were observed, which can only be explained by the selective influence of the adsorbate superstructure. In terms of thermodynamics, the facetting reconstruction can be described as an orientational phase separation, adapted to the constraints of planar surfaces. This concept is capable of explaining the local facetting phenomena. The formalism used predicts an important role of nucleation kinetics. This aspect is taken into account by introducing an additional phase of mobile molecules (2D molecular gas), which cannot be measured directly. Furthermore, strong arguments for the appearance of a critical island size for the PTCDA/ Ag(111) superstructure were found. This work presents structural information of all stable superstructures of PTCDA on vicinal Ag(111) surfaces. Altogether 16 such superstructures were found, 3 of which had been observed and published before. Density and commensurability were found to systematically depend on the step-structure. The two preferred inclinations of facets are related to two characteristic types of domain boundaries of the herringbone superstructure to the adjacent (111)-terrace. On the (111) terraces, small islands of metastable superstructures were found. Facets and (111) terraces form a regular grating-like domain pattern with a variable structural width of 5 to 75 nm. STM measurements show direct evidence for a long-range interaction

  6. Adaptive algebraic reconstruction technique

    International Nuclear Information System (INIS)

    Lu Wenkai; Yin Fangfang

    2004-01-01

    Algebraic reconstruction techniques (ART) are iterative procedures for reconstructing objects from their projections. It is proven that ART can be computationally efficient by carefully arranging the order in which the collected data are accessed during the reconstruction procedure and adaptively adjusting the relaxation parameters. In this paper, an adaptive algebraic reconstruction technique (AART), which adopts the same projection access scheme in multilevel scheme algebraic reconstruction technique (MLS-ART), is proposed. By introducing adaptive adjustment of the relaxation parameters during the reconstruction procedure, one-iteration AART can produce reconstructions with better quality, in comparison with one-iteration MLS-ART. Furthermore, AART outperforms MLS-ART with improved computational efficiency

  7. Detailed low-energy electron diffraction analysis of the (4×4) surface structure of C60 on Cu(111): Seven-atom-vacancy reconstruction

    Science.gov (United States)

    Xu, Geng; Shi, Xing-Qiang; Zhang, R. Q.; Pai, Woei Wu; Jeng, H. T.; Van Hove, M. A.

    2012-08-01

    A detailed and exhaustive structural analysis by low-energy electron diffraction (LEED) is reported for the C60-induced reconstruction of Cu(111), in the system Cu(111) + (4 × 4)-C60. A wide LEED energy range allows enhanced sensitivity to the crucial C60-metal interface that is buried below the 7-Å-thick molecular layer. The analysis clearly favors a seven-Cu-atom vacancy model (with Pendry R-factor Rp = 0.376) over a one-Cu-atom vacancy model (Rp = 0.608) and over nonreconstructed models (Rp = 0.671 for atop site and Rp = 0.536 for hcp site). The seven-Cu-atom vacancy forms a (4 × 4) lattice of bowl-like holes. In each hole, a C60 molecule can nestle by forming strong bonds (shorter than 2.30 Å) between 15 C atoms of the molecule and 12 Cu atoms of the outermost and second Cu layers.

  8. Coupled sea surface temperature-seawater delta O-18 reconstructions in the Arabian Sea at the millennial scale for the last 35 ka

    NARCIS (Netherlands)

    Anand, P.; Kroon, D.; Singh, A.D.; Ganssen, G.M.

    2008-01-01

    Two sediment cores from the western (905; 10.46°9′N, 51.56°4′E, water depth 1586 m) and eastern (SK17; 15°15′N, 72°58′E, water depth 840 m) Arabian Sea were used to study past sea surface temperatures (SST) and seawater δ

  9. Anomalous structural evolution and √ 3 x√ 3 reconstruction of a clean Si(111) surface observed after thermal desorption of thallium

    Czech Academy of Sciences Publication Activity Database

    Kocán, P.; Krejčí, Ondřej; Tochihara, H.

    2015-01-01

    Roč. 33, č. 2 (2015), "021408-1"-"021408-8" ISSN 0734-2101 Institutional support: RVO:68378271 Keywords : surface structure * Si(111) * thallium * LEED * STM Subject RIV: BM - Solid Matter Physics ; Magnetism Impact factor: 1.724, year: 2015

  10. Fault-related dolomitization in the Vajont Limestone (Southern Alps, Italy): photogrammetric 3D outcrop reconstruction, visualization with textured surfaces, and structural analysis

    OpenAIRE

    Bistacchi, Andrea; Balsamo, Fabrizio; Storti, Fabrizio; Mozafari, Mahtab; Swennen, Rudy; Solum, John; Taberner, Conxita

    2013-01-01

    The Vajont Gorge (Dolomiti Bellunesi, Italy) provides spectacular outcrops of Jurassic limestones (Vajont Limestone Formation) in which Mesozoic and Alpine faults and fracture corridors are continuously exposed. Some of these faults acted as conduits for fluids, resulting in structurally-controlled dolomitization of the Vajont Limestone, associated with significant porosity increase. We carried out a 3D surface characterization of the outcrops, combining high resolution topography and imaging...

  11. Application of 3D documentation and geometric reconstruction methods in traffic accident analysis: with high resolution surface scanning, radiological MSCT/MRI scanning and real data based animation.

    Science.gov (United States)

    Buck, Ursula; Naether, Silvio; Braun, Marcel; Bolliger, Stephan; Friederich, Hans; Jackowski, Christian; Aghayev, Emin; Christe, Andreas; Vock, Peter; Dirnhofer, Richard; Thali, Michael J

    2007-07-20

    The examination of traffic accidents is daily routine in forensic medicine. An important question in the analysis of the victims of traffic accidents, for example in collisions between motor vehicles and pedestrians or cyclists, is the situation of the impact. Apart from forensic medical examinations (external examination and autopsy), three-dimensional technologies and methods are gaining importance in forensic investigations. Besides the post-mortem multi-slice computed tomography (MSCT) and magnetic resonance imaging (MRI) for the documentation and analysis of internal findings, highly precise 3D surface scanning is employed for the documentation of the external body findings and of injury-inflicting instruments. The correlation of injuries of the body to the injury-inflicting object and the accident mechanism are of great importance. The applied methods include documentation of the external and internal body and the involved vehicles and inflicting tools as well as the analysis of the acquired data. The body surface and the accident vehicles with their damages were digitized by 3D surface scanning. For the internal findings of the body, post-mortem MSCT and MRI were used. The analysis included the processing of the obtained data to 3D models, determination of the driving direction of the vehicle, correlation of injuries to the vehicle damages, geometric determination of the impact situation and evaluation of further findings of the accident. In the following article, the benefits of the 3D documentation and computer-assisted, drawn-to-scale 3D comparisons of the relevant injuries with the damages to the vehicle in the analysis of the course of accidents, especially with regard to the impact situation, are shown on two examined cases.

  12. Surface reconstruction switching induced by tensile stress of DB steps: From Ba/Si(0 0 1)- 2 × 3 to Ba/Si(0 0 1)-4° off- 3 × 2

    Science.gov (United States)

    Kim, Hidong; Lkhagvasuren, Altaibaatar; Zhang, Rui; Seo, Jae M.

    2018-05-01

    The alkaline-earth metal adsorption on Si(0 0 1) has attracted much interest for finding a proper template in the growth of high- κ and crystalline films. Up to now on the flat Si(0 0 1) surface with double domains and single-layer steps, the adsorbed Ba atoms are known to induce the 2 × 3 structure through removing two Si dimers and adding a Ba atom per unit cell in each domain. In the present investigation, the Si(0 0 1)-4° off surface with DB steps and single domains has been employed as a substrate and the reconstruction at the initial stage of Ba adsorption has been investigated by scanning tunneling microscopy and synchrotron photoemission spectroscopy. On this vicinal and single domain terrace, a novel 3 × 2 structure rotated by 90° from the 2 × 3 structure has been found. Such a 3 × 2 structure turns out to be formed by adding a Ba atom and a Si dimer per unit cell. This results from the fact that the adsorbed Ba2+ ions with a larger ionic radius relieve tensile stress on the original Si dimers exerted by the rebonded atoms at the DB step.

  13. Neogene sea surface temperature reconstructions from the Southern McMurdo Sound and the McMurdo Ice Shelf (ANDRILL Program, Antarctica)

    Science.gov (United States)

    Sangiorgi, Francesca; Willmott, Veronica; Kim, Jung-Hyun; Schouten, Stefan; Brinkhuis, Henk; Sinninghe Damsté, Jaap S.; Florindo, Fabio; Harwood, David; Naish, Tim; Powell, Ross

    2010-05-01

    During the austral summers 2006 and 2007 the ANtarctic DRILLing Program (ANDRILL) drilled two cores, each recovering more than 1000m of sediment from below the McMurdo Ice-Shelf (MIS, AND-1B), and sea-ice in Southern McMurdo Sound (SMS, AND-2A), respectively, revealing new information about Neogene Antarctic cryosphere evolution. Core AND-1B was drilled in a more distal location than core AND-2A. With the aim of obtaining important information for the understanding of the history of Antarctic climate and environment during selected interval of the Neogene, we applied novel organic geochemistry proxies such as TEX86 (Tetra Ether IndeX of lipids with 86 carbon atoms) using a new calibration equation specifically developed for polar areas and based on 116 surface sediment samples collected from polar oceans (Kim et al., subm.), and BIT (Branched and Isoprenoid Tetraether), to derive absolute (sea surface) temperature values and to evaluate the relative contribution of soil organic matter versus marine organic matter, respectively. We will present the state-of-the-art of the methodology applied, discussing its advantages and limitations, and the results so far obtained from the analysis of 60 samples from core AND-2A covering the Miocene Climatic Optimum (and the Mid-late Miocene transition) and of 20 pilot samples from core AND-1B covering the late Pliocene.

  14. Multi-species coral Sr/Ca-based sea-surface temperature reconstruction using Orbicella faveolata and Siderastrea siderea from the Florida Straits

    Science.gov (United States)

    Flannery, Jennifer A.; Richey, Julie N.; Thirumalai, Kaustubh; Poore, Richard Z.; DeLong, Kristine L.

    2017-01-01

    We present new, monthly-resolved Sr/Ca-based sea-surface temperature (SST) records from two species of massive coral, Orbicella faveolata and Siderastrea siderea, from the Dry Tortugas National Park, FL, USA (DTNP). We combine these new records with published data from three additional S. siderea coral colonies to generate a 278-year long multi-species stacked Sr/Ca-SST record from DTNP. The composite record of mean annual Sr/Ca-SST at DTNP shows pronounced decadal-scale variability with a range of 1 to 2°C. Notable cool intervals in the Sr/Ca-derived SST lasting about a decade centered at ~1845, ~1935, and ~1965 are associated with reduced summer Sr/Ca-SST (monthly maxima < 29°C), and imply a reduction in the spatial extent of the Atlantic Warm Pool (AWP). There is significant coherence between the composite DTNP Sr/Ca-SST record and the Atlantic Multidecadal Oscillation (AMO) index, with the AMO lagging Sr/Ca-SST at DTNP by 9 years. Low frequency variability in the Gulf Stream surface transport, which originates near DTNP, may provide a link for the lagged relationship between multidecadal variability at DTNP and the AMO.

  15. Formation and reconstruction of Se nanoislands at the surface of thin epitaxial ZnSe layers grown on GaAs substrates

    Energy Technology Data Exchange (ETDEWEB)

    Kozlovskiy, V. I.; Krivobok, V. S., E-mail: krivobok@lebedev.ru [Russian Academy of Sciences, Lebedev Physical Institute (Russian Federation); Kuznetsov, P. I.; Nikolaev, S. N.; Onistchenko, E. E.; Pruchkina, A. A.; Temiryazev, A. G. [Russian Academy of Sciences, Kotel’nikov Institute of Radio-Engineering and Electronics (Russian Federation)

    2016-05-15

    Strained epitaxial ZnSe layers are grown on GaAs substrates by the method of vapor-phase epitaxy from metal-organic compounds. It is found that Se nanoislands with a density of 10{sup 8} to 10{sup 9} cm{sup –2} are formed at the surface of such layers. It is established that an increase in the size of Se islands and a decrease in their density take place after completion of growth. Annealing in a H{sub 2} atmosphere at a temperature higher than 260°C leads to the disappearance of Se islands and to a decrease in the surface roughness. It is shown that annealing does not lead to deterioration of the structural perfection of the epitaxial ZnSe films; rather, annealing gives rise to a decrease in the intensity of impurity–defect luminescence and to an increase in the intensity of intrinsic radiation near the bottom of the exciton band.

  16. Breast reconstruction - natural tissue

    Science.gov (United States)

    ... flap; TRAM; Latissimus muscle flap with a breast implant; DIEP flap; DIEAP flap; Gluteal free flap; Transverse upper gracilis flap; TUG; Mastectomy - breast reconstruction with natural tissue; Breast cancer - breast reconstruction with natural tissue

  17. Breast reconstruction after mastectomy

    Directory of Open Access Journals (Sweden)

    Daniel eSchmauss

    2016-01-01

    Full Text Available Breast cancer is the leading cause of cancer death in women worldwide. Its surgical approach has become less and less mutilating in the last decades. However, the overall number of breast reconstructions has significantly increased lately. Nowadays breast reconstruction should be individualized at its best, first of all taking into consideration oncological aspects of the tumor, neo-/adjuvant treatment and genetic predisposition, but also its timing (immediate versus delayed breast reconstruction, as well as the patient’s condition and wish. This article gives an overview over the various possibilities of breast reconstruction, including implant- and expander-based reconstruction, flap-based reconstruction (vascularized autologous tissue, the combination of implant and flap, reconstruction using non-vascularized autologous fat, as well as refinement surgery after breast reconstruction.

  18. Detection of compression vessels in trigeminal neuralgia by surface-rendering three-dimensional reconstruction of 1.5- and 3.0-T magnetic resonance imaging.

    Science.gov (United States)

    Shimizu, Masahiro; Imai, Hideaki; Kagoshima, Kaiei; Umezawa, Eriko; Shimizu, Tsuneo; Yoshimoto, Yuhei

    2013-01-01

    Surface-rendered three-dimensional (3D) 1.5-T magnetic resonance (MR) imaging is useful for presurgical simulation of microvascular decompression. This study compared the sensitivity and specificity of 1.5- and 3.0-T surface-rendered 3D MR imaging for preoperative identification of the compression vessels of trigeminal neuralgia. One hundred consecutive patients underwent microvascular decompression for trigeminal neuralgia. Forty and 60 patients were evaluated by 1.5- and 3.0-T MR imaging, respectively. Three-dimensional MR images were constructed on the basis of MR imaging, angiography, and venography data and evaluated to determine the compression vessel before surgery. MR imaging findings were compared with the microsurgical findings to compare the sensitivity and specificity of 1.5- and 3.0-T MR imaging. The agreement between MR imaging and surgical findings depended on the compression vessels. For superior cerebellar artery, 1.5- and 3.0-T MR imaging had 84.4% and 82.7% sensitivity and 100% and 100% specificity, respectively. For anterior inferior cerebellar artery, 1.5- and 3.0-T MR imaging had 33.3% and 50% sensitivity and 92.9% and 95% specificity, respectively. For the petrosal vein, 1.5- and 3.0-T MR imaging had 75% and 64.3% sensitivity and 79.2% and 78.1% specificity, respectively. Complete pain relief was obtained in 36 of 40 and 55 of 60 patients undergoing 1.5- and 3.0-T MR imaging, respectively. The present study showed that both 1.5- and 3.0-T MR imaging provided high sensitivity and specificity for preoperative assessment of the compression vessels of trigeminal neuralgia. Preoperative 3D imaging provided very high quality presurgical simulation, resulting in excellent clinical outcomes. Copyright © 2013 Elsevier Inc. All rights reserved.

  19. DD4Hep based event reconstruction

    CERN Document Server

    AUTHOR|(SzGeCERN)683529; Frank, Markus; Gaede, Frank-Dieter; Hynds, Daniel; Lu, Shaojun; Nikiforou, Nikiforos; Petric, Marko; Simoniello, Rosa; Voutsinas, Georgios Gerasimos

    The DD4HEP detector description toolkit offers a flexible and easy-to-use solution for the consistent and complete description of particle physics detectors in a single system. The sub-component DDREC provides a dedicated interface to the detector geometry as needed for event reconstruction. With DDREC there is no need to define an additional, separate reconstruction geometry as is often done in HEP, but one can transparently extend the existing detailed simulation model to be also used for the reconstruction. Based on the extension mechanism of DD4HEP, DDREC allows one to attach user defined data structures to detector elements at all levels of the geometry hierarchy. These data structures define a high level view onto the detectors describing their physical properties, such as measurement layers, point resolutions, and cell sizes. For the purpose of charged particle track reconstruction, dedicated surface objects can be attached to every volume in the detector geometry. These surfaces provide the measuremen...

  20. The ongoing emergence of robotics in plastic and reconstructive surgery.

    Science.gov (United States)

    Struk, S; Qassemyar, Q; Leymarie, N; Honart, J-F; Alkhashnam, H; De Fremicourt, K; Conversano, A; Schaff, J-B; Rimareix, F; Kolb, F; Sarfati, B

    2018-04-01

    Robot-assisted surgery is more and more widely used in urology, general surgery and gynecological surgery. The interest of robotics in plastic and reconstructive surgery, a discipline that operates primarily on surfaces, has yet to be conclusively proved. However, the initial applications of robotic surgery in plastic and reconstructive surgery have been emerging in a number of fields including transoral reconstruction of posterior oropharyngeal defects, nipple-sparing mastectomy with immediate breast reconstruction, microsurgery, muscle harvesting for pelvic reconstruction and coverage of the scalp or the extremities. Copyright © 2018 Elsevier Masson SAS. All rights reserved.

  1. Poly (d/l) lactide/polycaprolactone/bioactive glasss nanocomposites materials for anterior cruciate ligament reconstruction screws: The effect of glass surface functionalization on mechanical properties and cell behaviors.

    Science.gov (United States)

    Esmaeilzadeh, Javad; Hesaraki, Saeed; Hadavi, Seyed Mohammad-Mehdi; Ebrahimzadeh, Mohammad Hosein; Esfandeh, Masoud

    2017-08-01

    In this paper, different nanocomposites made of a polymer blend (80% of PDLLA and 20% of PCL in w/w) and various amounts of a sol-gel derived bioactive glass nanoparticles (0, 1, 3 and 6wt%) were prepared using a solvent-evaporation technique. The morphology, mechanical properties and osteoblastic cell behaviors of the nanocomposites were evaluated. According to the early results, addition of bioactive glass nanoparticles to the polymer matrix reduced the tensile and flexural strength because of a non-uniform distribution of the nanoparticles. Thus, a homogeneous dispersion was obtained by surface modification of the glass nanoparticles using (3-aminopropyl)triethoxysilane as a coupling agent. The results showed that the tensile and flexural strength of the nanocomposite were improved by the nanoparticle functionalization, however the glass content was a crucial factor. The maximum tensile and flexural strength values of 38MPa and 94MPa were obtained for the polymer matrix loaded with 3wt% of the modified nanofiller and further increase of filler content led to sever agglomeration and hence a reduction of the mechanical properties. The obtained mechanical properties are favorable for anterior cruciate ligament reconstruction screws. Besides, the results of cell culture using human osteoblastic cells illustrated better cell attachment and cell growth of the nanocomposites compared to the neat polymer blend. Copyright © 2017 Elsevier B.V. All rights reserved.

  2. EIT image reconstruction with four dimensional regularization.

    Science.gov (United States)

    Dai, Tao; Soleimani, Manuchehr; Adler, Andy

    2008-09-01

    Electrical impedance tomography (EIT) reconstructs internal impedance images of the body from electrical measurements on body surface. The temporal resolution of EIT data can be very high, although the spatial resolution of the images is relatively low. Most EIT reconstruction algorithms calculate images from data frames independently, although data are actually highly correlated especially in high speed EIT systems. This paper proposes a 4-D EIT image reconstruction for functional EIT. The new approach is developed to directly use prior models of the temporal correlations among images and 3-D spatial correlations among image elements. A fast algorithm is also developed to reconstruct the regularized images. Image reconstruction is posed in terms of an augmented image and measurement vector which are concatenated from a specific number of previous and future frames. The reconstruction is then based on an augmented regularization matrix which reflects the a priori constraints on temporal and 3-D spatial correlations of image elements. A temporal factor reflecting the relative strength of the image correlation is objectively calculated from measurement data. Results show that image reconstruction models which account for inter-element correlations, in both space and time, show improved resolution and noise performance, in comparison to simpler image models.

  3. Evaluation of proxy-based millennial reconstruction methods

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Terry C.K.; Tsao, Min [University of Victoria, Department of Mathematics and Statistics, Victoria, BC (Canada); Zwiers, Francis W. [Environment Canada, Climate Research Division, Toronto, ON (Canada)

    2008-08-15

    A range of existing statistical approaches for reconstructing historical temperature variations from proxy data are compared using both climate model data and real-world paleoclimate proxy data. We also propose a new method for reconstruction that is based on a state-space time series model and Kalman filter algorithm. The state-space modelling approach and the recently developed RegEM method generally perform better than their competitors when reconstructing interannual variations in Northern Hemispheric mean surface air temperature. On the other hand, a variety of methods are seen to perform well when reconstructing surface air temperature variability on decadal time scales. An advantage of the new method is that it can incorporate additional, non-temperature, information into the reconstruction, such as the estimated response to external forcing, thereby permitting a simultaneous reconstruction and detection analysis as well as future projection. An application of these extensions is also demonstrated in the paper. (orig.)

  4. Image Reconstruction. Chapter 13

    Energy Technology Data Exchange (ETDEWEB)

    Nuyts, J. [Department of Nuclear Medicine and Medical Imaging Research Center, Katholieke Universiteit Leuven, Leuven (Belgium); Matej, S. [Medical Image Processing Group, Department of Radiology, University of Pennsylvania, Philadelphia, PA (United States)

    2014-12-15

    This chapter discusses how 2‑D or 3‑D images of tracer distribution can be reconstructed from a series of so-called projection images acquired with a gamma camera or a positron emission tomography (PET) system [13.1]. This is often called an ‘inverse problem’. The reconstruction is the inverse of the acquisition. The reconstruction is called an inverse problem because making software to compute the true tracer distribution from the acquired data turns out to be more difficult than the ‘forward’ direction, i.e. making software to simulate the acquisition. There are basically two approaches to image reconstruction: analytical reconstruction and iterative reconstruction. The analytical approach is based on mathematical inversion, yielding efficient, non-iterative reconstruction algorithms. In the iterative approach, the reconstruction problem is reduced to computing a finite number of image values from a finite number of measurements. That simplification enables the use of iterative instead of mathematical inversion. Iterative inversion tends to require more computer power, but it can cope with more complex (and hopefully more accurate) models of the acquisition process.

  5. Update on orbital reconstruction.

    Science.gov (United States)

    Chen, Chien-Tzung; Chen, Yu-Ray

    2010-08-01

    Orbital trauma is common and frequently complicated by ocular injuries. The recent literature on orbital fracture is analyzed with emphasis on epidemiological data assessment, surgical timing, method of approach and reconstruction materials. Computed tomographic (CT) scan has become a routine evaluation tool for orbital trauma, and mobile CT can be applied intraoperatively if necessary. Concomitant serious ocular injury should be carefully evaluated preoperatively. Patients presenting with nonresolving oculocardiac reflex, 'white-eyed' blowout fracture, or diplopia with a positive forced duction test and CT evidence of orbital tissue entrapment require early surgical repair. Otherwise, enophthalmos can be corrected by late surgery with a similar outcome to early surgery. The use of an endoscope-assisted approach for orbital reconstruction continues to grow, offering an alternative method. Advances in alloplastic materials have improved surgical outcome and shortened operating time. In this review of modern orbital reconstruction, several controversial issues such as surgical indication, surgical timing, method of approach and choice of reconstruction material are discussed. Preoperative fine-cut CT image and thorough ophthalmologic examination are key elements to determine surgical indications. The choice of surgical approach and reconstruction materials much depends on the surgeon's experience and the reconstruction area. Prefabricated alloplastic implants together with image software and stereolithographic models are significant advances that help to more accurately reconstruct the traumatized orbit. The recent evolution of orbit reconstruction improves functional and aesthetic results and minimizes surgical complications.

  6. Permutationally invariant state reconstruction

    DEFF Research Database (Denmark)

    Moroder, Tobias; Hyllus, Philipp; Tóth, Géza

    2012-01-01

    Feasible tomography schemes for large particle numbers must possess, besides an appropriate data acquisition protocol, an efficient way to reconstruct the density operator from the observed finite data set. Since state reconstruction typically requires the solution of a nonlinear large-scale opti...... optimization, which has clear advantages regarding speed, control and accuracy in comparison to commonly employed numerical routines. First prototype implementations easily allow reconstruction of a state of 20 qubits in a few minutes on a standard computer.......-scale optimization problem, this is a major challenge in the design of scalable tomography schemes. Here we present an efficient state reconstruction scheme for permutationally invariant quantum state tomography. It works for all common state-of-the-art reconstruction principles, including, in particular, maximum...

  7. Spiral scan long object reconstruction through PI line reconstruction

    International Nuclear Information System (INIS)

    Tam, K C; Hu, J; Sourbelle, K

    2004-01-01

    The response of a point object in a cone beam (CB) spiral scan is analysed. Based on the result, a reconstruction algorithm for long object imaging in spiral scan cone beam CT is developed. A region-of-interest (ROI) of the long object is scanned with a detector smaller than the ROI, and a portion of it can be reconstructed without contamination from overlaying materials. The top and bottom surfaces of the ROI are defined by two sets of PI lines near the two ends of the spiral path. With this novel definition of the top and bottom ROI surfaces and through the use of projective geometry, it is straightforward to partition the cone beam image into regions corresponding to projections of the ROI, the overlaying objects or both. This also simplifies computation at source positions near the spiral ends, and makes it possible to reduce radiation exposure near the spiral ends substantially through simple hardware collimation. Simulation results to validate the algorithm are presented

  8. Hybrid spectral CT reconstruction.

    Directory of Open Access Journals (Sweden)

    Darin P Clark

    Full Text Available Current photon counting x-ray detector (PCD technology faces limitations associated with spectral fidelity and photon starvation. One strategy for addressing these limitations is to supplement PCD data with high-resolution, low-noise data acquired with an energy-integrating detector (EID. In this work, we propose an iterative, hybrid reconstruction technique which combines the spectral properties of PCD data with the resolution and signal-to-noise characteristics of EID data. Our hybrid reconstruction technique is based on an algebraic model of data fidelity which substitutes the EID data into the data fidelity term associated with the PCD reconstruction, resulting in a joint reconstruction problem. Within the split Bregman framework, these data fidelity constraints are minimized subject to additional constraints on spectral rank and on joint intensity-gradient sparsity measured between the reconstructions of the EID and PCD data. Following a derivation of the proposed technique, we apply it to the reconstruction of a digital phantom which contains realistic concentrations of iodine, barium, and calcium encountered in small-animal micro-CT. The results of this experiment suggest reliable separation and detection of iodine at concentrations ≥ 5 mg/ml and barium at concentrations ≥ 10 mg/ml in 2-mm features for EID and PCD data reconstructed with inherent spatial resolutions of 176 μm and 254 μm, respectively (point spread function, FWHM. Furthermore, hybrid reconstruction is demonstrated to enhance spatial resolution within material decomposition results and to improve low-contrast detectability by as much as 2.6 times relative to reconstruction with PCD data only. The parameters of the simulation experiment are based on an in vivo micro-CT experiment conducted in a mouse model of soft-tissue sarcoma. Material decomposition results produced from this in vivo data demonstrate the feasibility of distinguishing two K-edge contrast agents with

  9. Hybrid spectral CT reconstruction

    Science.gov (United States)

    Clark, Darin P.

    2017-01-01

    Current photon counting x-ray detector (PCD) technology faces limitations associated with spectral fidelity and photon starvation. One strategy for addressing these limitations is to supplement PCD data with high-resolution, low-noise data acquired with an energy-integrating detector (EID). In this work, we propose an iterative, hybrid reconstruction technique which combines the spectral properties of PCD data with the resolution and signal-to-noise characteristics of EID data. Our hybrid reconstruction technique is based on an algebraic model of data fidelity which substitutes the EID data into the data fidelity term associated with the PCD reconstruction, resulting in a joint reconstruction problem. Within the split Bregman framework, these data fidelity constraints are minimized subject to additional constraints on spectral rank and on joint intensity-gradient sparsity measured between the reconstructions of the EID and PCD data. Following a derivation of the proposed technique, we apply it to the reconstruction of a digital phantom which contains realistic concentrations of iodine, barium, and calcium encountered in small-animal micro-CT. The results of this experiment suggest reliable separation and detection of iodine at concentrations ≥ 5 mg/ml and barium at concentrations ≥ 10 mg/ml in 2-mm features for EID and PCD data reconstructed with inherent spatial resolutions of 176 μm and 254 μm, respectively (point spread function, FWHM). Furthermore, hybrid reconstruction is demonstrated to enhance spatial resolution within material decomposition results and to improve low-contrast detectability by as much as 2.6 times relative to reconstruction with PCD data only. The parameters of the simulation experiment are based on an in vivo micro-CT experiment conducted in a mouse model of soft-tissue sarcoma. Material decomposition results produced from this in vivo data demonstrate the feasibility of distinguishing two K-edge contrast agents with a spectral

  10. Virtual Reconstruction of Cultural Heritage Artifacts

    Czech Academy of Sciences Publication Activity Database

    Haindl, Michal; Sedláček, Matěj; Vávra, Radomír

    2015-01-01

    Roč. 2015, č. 103 (2015), s. 12-13 ISSN 0926-4981 R&D Projects: GA ČR(CZ) GA14-10911S Institutional support: RVO:67985556 Keywords : virtual reconstruction * shape modeling * surface modeling * bidirectional texture function Subject RIV: BD - Theory of Information http:// library .utia.cas.cz/separaty/2015/RO/haindl-0447984.pdf

  11. Precise shape reconstruction by active pattern in total-internal-reflection-based tactile sensor.

    Science.gov (United States)

    Saga, Satoshi; Taira, Ryosuke; Deguchi, Koichiro

    2014-03-01

    We are developing a total-internal-reflection-based tactile sensor in which the shape is reconstructed using an optical reflection. This sensor consists of silicone rubber, an image pattern, and a camera. It reconstructs the shape of the sensor surface from an image of a pattern reflected at the inner sensor surface by total internal reflection. In this study, we propose precise real-time reconstruction by employing an optimization method. Furthermore, we propose to use active patterns. Deformation of the reflection image causes reconstruction errors. By controlling the image pattern, the sensor reconstructs the surface deformation more precisely. We implement the proposed optimization and active-pattern-based reconstruction methods in a reflection-based tactile sensor, and perform reconstruction experiments using the system. A precise deformation experiment confirms the linearity and precision of the reconstruction.

  12. UV Reconstruction Algorithm And Diurnal Cycle Variability

    Science.gov (United States)

    Curylo, Aleksander; Litynska, Zenobia; Krzyscin, Janusz; Bogdanska, Barbara

    2009-03-01

    UV reconstruction is a method of estimation of surface UV with the use of available actinometrical and aerological measurements. UV reconstruction is necessary for the study of long-term UV change. A typical series of UV measurements is not longer than 15 years, which is too short for trend estimation. The essential problem in the reconstruction algorithm is the good parameterization of clouds. In our previous algorithm we used an empirical relation between Cloud Modification Factor (CMF) in global radiation and CMF in UV. The CMF is defined as the ratio between measured and modelled irradiances. Clear sky irradiance was calculated with a solar radiative transfer model. In the proposed algorithm, the time variability of global radiation during the diurnal cycle is used as an additional source of information. For elaborating an improved reconstruction algorithm relevant data from Legionowo [52.4 N, 21.0 E, 96 m a.s.l], Poland were collected with the following instruments: NILU-UV multi channel radiometer, Kipp&Zonen pyranometer, radiosonde profiles of ozone, humidity and temperature. The proposed algorithm has been used for reconstruction of UV at four Polish sites: Mikolajki, Kolobrzeg, Warszawa-Bielany and Zakopane since the early 1960s. Krzyscin's reconstruction of total ozone has been used in the calculations.

  13. Overview of image reconstruction

    International Nuclear Information System (INIS)

    Marr, R.B.

    1980-04-01

    Image reconstruction (or computerized tomography, etc.) is any process whereby a function, f, on R/sup n/ is estimated from empirical data pertaining to its integrals, ∫f(x) dx, for some collection of hyperplanes of dimension k < n. The paper begins with background information on how image reconstruction problems have arisen in practice, and describes some of the application areas of past or current interest; these include radioastronomy, optics, radiology and nuclear medicine, electron microscopy, acoustical imaging, geophysical tomography, nondestructive testing, and NMR zeugmatography. Then the various reconstruction algorithms are discussed in five classes: summation, or simple back-projection; convolution, or filtered back-projection; Fourier and other functional transforms; orthogonal function series expansion; and iterative methods. Certain more technical mathematical aspects of image reconstruction are considered from the standpoint of uniqueness, consistency, and stability of solution. The paper concludes by presenting certain open problems. 73 references

  14. The evolving breast reconstruction

    DEFF Research Database (Denmark)

    Thomsen, Jørn Bo; Gunnarsson, Gudjon Leifur

    2014-01-01

    The aim of this editorial is to give an update on the use of the propeller thoracodorsal artery perforator flap (TAP/TDAP-flap) within the field of breast reconstruction. The TAP-flap can be dissected by a combined use of a monopolar cautery and a scalpel. Microsurgical instruments are generally...... not needed. The propeller TAP-flap can be designed in different ways, three of these have been published: (I) an oblique upwards design; (II) a horizontal design; (III) an oblique downward design. The latissimus dorsi-flap is a good and reliable option for breast reconstruction, but has been criticized...... for oncoplastic and reconstructive breast surgery and will certainly become an invaluable addition to breast reconstructive methods....

  15. Forging Provincial Reconstruction Teams

    National Research Council Canada - National Science Library

    Honore, Russel L; Boslego, David V

    2007-01-01

    The Provincial Reconstruction Team (PRT) training mission completed by First U.S. Army in April 2006 was a joint Service effort to meet a requirement from the combatant commander to support goals in Afghanistan...

  16. Breast Reconstruction with Implants

    Science.gov (United States)

    ... your surgical options and discuss the advantages and disadvantages of implant-based reconstruction, and may show you ... Policy Notice of Privacy Practices Notice of Nondiscrimination Advertising Mayo Clinic is a not-for-profit organization ...

  17. 3-D Reconstruction From Satellite Images

    DEFF Research Database (Denmark)

    Denver, Troelz

    1999-01-01

    of planetary surfaces, but other purposes is considered as well. The system performance is measured with respect to the precision and the time consumption.The reconstruction process is divided into four major areas: Acquisition, calibration, matching/reconstruction and presentation. Each of these areas...... are treated individually. A detailed treatment of various lens distortions is required, in order to correct for these problems. This subject is included in the acquisition part. In the calibration part, the perspective distortion is removed from the images. Most attention has been paid to the matching problem...

  18. Rapidly 3D Texture Reconstruction Based on Oblique Photography

    Directory of Open Access Journals (Sweden)

    ZHANG Chunsen

    2015-07-01

    Full Text Available This paper proposes a city texture fast reconstruction method based on aerial tilt image for reconstruction of three-dimensional city model. Based on the photogrammetry and computer vision theory and using the city building digital surface model obtained by prior treatment, through collinear equation calculation geometric projection of object and image space, to obtain the three-dimensional information and texture information of the structure and through certain the optimal algorithm selecting the optimal texture on the surface of the object, realize automatic extraction of the building side texture and occlusion handling of the dense building texture. The real image texture reconstruction results show that: the method to the 3D city model texture reconstruction has the characteristics of high degree of automation, vivid effect and low cost and provides a means of effective implementation for rapid and widespread real texture rapid reconstruction of city 3D model.

  19. Three-dimensional reconstruction and visualization system for medical images

    International Nuclear Information System (INIS)

    Preston, D.F.; Batnitzky, S.; Kyo Rak Lee; Cook, P.N.; Cook, L.T.; Dwyer, S.J.

    1982-01-01

    A three-dimensional reconstruction and visualization system could be of significant advantage in medical application such as neurosurgery and radiation treatment planning. The reconstructed anatomic structures from CT head scans could be used in a head stereotactic system to help plan the surgical procedure and the radiation treatment for a brain lesion. Also, the use of three-dimensional reconstruction algorithm provides for quantitative measures such as volume and surface area estimation of the anatomic features. This aspect of the three-dimensional reconstruction system may be used to monitor the progress or staging of a disease and the effects of patient treatment. Two cases are presented to illustrate the three-dimensional surface reconstruction and visualization system

  20. A novel mechanochemical method for reconstructing the moisture-degraded HKUST-1.

    Science.gov (United States)

    Sun, Xuejiao; Li, Hao; Li, Yujie; Xu, Feng; Xiao, Jing; Xia, Qibin; Li, Yingwei; Li, Zhong

    2015-07-11

    A novel mechanochemical method was proposed to reconstruct quickly moisture-degraded HKUST-1. The degraded HKUST-1 can be restored within minutes. The reconstructed samples were characterized, and confirmed to have 95% surface area and 92% benzene capacity of the fresh HKUST-1. It is a simple and effective strategy for degraded MOF reconstruction.

  1. Human eyeball model reconstruction and quantitative analysis.

    Science.gov (United States)

    Xing, Qi; Wei, Qi

    2014-01-01

    Determining shape of the eyeball is important to diagnose eyeball disease like myopia. In this paper, we present an automatic approach to precisely reconstruct three dimensional geometric shape of eyeball from MR Images. The model development pipeline involved image segmentation, registration, B-Spline surface fitting and subdivision surface fitting, neither of which required manual interaction. From the high resolution resultant models, geometric characteristics of the eyeball can be accurately quantified and analyzed. In addition to the eight metrics commonly used by existing studies, we proposed two novel metrics, Gaussian Curvature Analysis and Sphere Distance Deviation, to quantify the cornea shape and the whole eyeball surface respectively. The experiment results showed that the reconstructed eyeball models accurately represent the complex morphology of the eye. The ten metrics parameterize the eyeball among different subjects, which can potentially be used for eye disease diagnosis.

  2. Atomic structure of the indium-induced Ge(001)(¤n¤x4) surface reconstruction determined by scanning tunneling microscopy and ¤ab initio¤ calculations

    DEFF Research Database (Denmark)

    Falkenberg, G.; Bunk, O.; Johnson, R.L.

    2002-01-01

    . An ordered arrangement of the subunits into a (7x4) reconstruction can be prepared at saturation coverage. The (3x4) subunits are well described by the pyramidlike model introduced by O. Bunk, G. Falkenberg, L. Seehofer, J. H. Zeysing, R. L. Johnson, M. Nielsen, R. Feidenhans'l, and E. Landermark, Appl. Surf...

  3. Industrial dynamic tomographic reconstruction

    International Nuclear Information System (INIS)

    Oliveira, Eric Ferreira de

    2016-01-01

    The state of the art methods applied to industrial processes is currently based on the principles of classical tomographic reconstructions developed for tomographic patterns of static distributions, or is limited to cases of low variability of the density distribution function of the tomographed object. Noise and motion artifacts are the main problems caused by a mismatch in the data from views acquired in different instants. All of these add to the known fact that using a limited amount of data can result in the presence of noise, artifacts and some inconsistencies with the distribution under study. One of the objectives of the present work is to discuss the difficulties that arise from implementing reconstruction algorithms in dynamic tomography that were originally developed for static distributions. Another objective is to propose solutions that aim at reducing a temporal type of information loss caused by employing regular acquisition systems to dynamic processes. With respect to dynamic image reconstruction it was conducted a comparison between different static reconstruction methods, like MART and FBP, when used for dynamic scenarios. This comparison was based on a MCNPx simulation as well as an analytical setup of an aluminum cylinder that moves along the section of a riser during the process of acquisition, and also based on cross section images from CFD techniques. As for the adaptation of current tomographic acquisition systems for dynamic processes, this work established a sequence of tomographic views in a just-in-time fashion for visualization purposes, a form of visually disposing density information as soon as it becomes amenable to image reconstruction. A third contribution was to take advantage of the triple color channel necessary to display colored images in most displays, so that, by appropriately scaling the acquired values of each view in the linear system of the reconstruction, it was possible to imprint a temporal trace into the regularly

  4. Alternative reconstruction after pancreaticoduodenectomy

    Directory of Open Access Journals (Sweden)

    Cooperman Avram M

    2008-01-01

    Full Text Available Abstract Background Pancreaticoduodenectomy is the procedure of choice for tumors of the head of the pancreas and periampulla. Despite advances in surgical technique and postoperative care, the procedure continues to carry a high morbidity rate. One of the most common morbidities is delayed gastric emptying with rates of 15%–40%. Following two prolonged cases of delayed gastric emptying, we altered our reconstruction to avoid this complication altogether. Subsequently, our patients underwent a classic pancreaticoduodenectomy with an undivided Roux-en-Y technique for reconstruction. Methods We reviewed the charts of our last 13 Whipple procedures evaluating them for complications, specifically delayed gastric emptying. We compared the outcomes of those patients to a control group of 15 patients who underwent the Whipple procedure with standard reconstruction. Results No instances of delayed gastric emptying occurred in patients who underwent an undivided Roux-en-Y technique for reconstruction. There was 1 wound infection (8%, 1 instance of pneumonia (8%, and 1 instance of bleeding from the gastrojejunal staple line (8%. There was no operative mortality. Conclusion Use of the undivided Roux-en-Y technique for reconstruction following the Whipple procedure may decrease the incidence of delayed gastric emptying. In addition, it has the added benefit of eliminating bile reflux gastritis. Future randomized control trials are recommended to further evaluate the efficacy of the procedure.

  5. Reconstructing random media

    International Nuclear Information System (INIS)

    Yeong, C.L.; Torquato, S.

    1998-01-01

    We formulate a procedure to reconstruct the structure of general random heterogeneous media from limited morphological information by extending the methodology of Rintoul and Torquato [J. Colloid Interface Sci. 186, 467 (1997)] developed for dispersions. The procedure has the advantages that it is simple to implement and generally applicable to multidimensional, multiphase, and anisotropic structures. Furthermore, an extremely useful feature is that it can incorporate any type and number of correlation functions in order to provide as much morphological information as is necessary for accurate reconstruction. We consider a variety of one- and two-dimensional reconstructions, including periodic and random arrays of rods, various distribution of disks, Debye random media, and a Fontainebleau sandstone sample. We also use our algorithm to construct heterogeneous media from specified hypothetical correlation functions, including an exponentially damped, oscillating function as well as physically unrealizable ones. copyright 1998 The American Physical Society

  6. Delayed breast implant reconstruction

    DEFF Research Database (Denmark)

    Hvilsom, Gitte B.; Hölmich, Lisbet R.; Steding-Jessen, Marianne

    2012-01-01

    We evaluated the association between radiation therapy and severe capsular contracture or reoperation after 717 delayed breast implant reconstruction procedures (288 1- and 429 2-stage procedures) identified in the prospective database of the Danish Registry for Plastic Surgery of the Breast during...... of radiation therapy was associated with a non-significantly increased risk of reoperation after both 1-stage (HR = 1.4; 95% CI: 0.7-2.5) and 2-stage (HR = 1.6; 95% CI: 0.9-3.1) procedures. Reconstruction failure was highest (13.2%) in the 2-stage procedures with a history of radiation therapy. Breast...... reconstruction approaches other than implants should be seriously considered among women who have received radiation therapy....

  7. Stereo reconstruction from multiperspective panoramas.

    Science.gov (United States)

    Li, Yin; Shum, Heung-Yeung; Tang, Chi-Keung; Szeliski, Richard

    2004-01-01

    A new approach to computing a panoramic (360 degrees) depth map is presented in this paper. Our approach uses a large collection of images taken by a camera whose motion has been constrained to planar concentric circles. We resample regular perspective images to produce a set of multiperspective panoramas and then compute depth maps directly from these resampled panoramas. Our panoramas sample uniformly in three dimensions: rotation angle, inverse radial distance, and vertical elevation. The use of multiperspective panoramas eliminates the limited overlap present in the original input images and, thus, problems as in conventional multibaseline stereo can be avoided. Our approach differs from stereo matching of single-perspective panoramic images taken from different locations, where the epipolar constraints are sine curves. For our multiperspective panoramas, the epipolar geometry, to the first order approximation, consists of horizontal lines. Therefore, any traditional stereo algorithm can be applied to multiperspective panoramas with little modification. In this paper, we describe two reconstruction algorithms. The first is a cylinder sweep algorithm that uses a small number of resampled multiperspective panoramas to obtain dense 3D reconstruction. The second algorithm, in contrast, uses a large number of multiperspective panoramas and takes advantage of the approximate horizontal epipolar geometry inherent in multiperspective panoramas. It comprises a novel and efficient 1D multibaseline matching technique, followed by tensor voting to extract the depth surface. Experiments show that our algorithms are capable of producing comparable high quality depth maps which can be used for applications such as view interpolation.

  8. HEEL BONE RECONSTRUCTIVE OSTEOSYNTHESIS

    Directory of Open Access Journals (Sweden)

    A. N. Svetashov

    2010-01-01

    Full Text Available To detect the most appropriate to heel bone injury severity variants of reconstructive osteosynthesis it was analyzed treatment results of 56 patients. In 15 (26.8% patients classic methods of surgical service were applied, in 41 (73.2% cases to restore the defect porous implants were used. Osteosynthesis without heel bone plastic restoration accomplishment was ineffective in 60% patients from control group. Reconstructive osteosynthesis method ensures long-term good functional effect of rehabilitation in 96.4% patients from the basic group.

  9. Vertex reconstruction in CMS

    International Nuclear Information System (INIS)

    Chabanat, E.; D'Hondt, J.; Estre, N.; Fruehwirth, R.; Prokofiev, K.; Speer, T.; Vanlaer, P.; Waltenberger, W.

    2005-01-01

    Due to the high track multiplicity in the final states expected in proton collisions at the LHC experiments, novel vertex reconstruction algorithms are required. The vertex reconstruction problem can be decomposed into a pattern recognition problem ('vertex finding') and an estimation problem ('vertex fitting'). Starting from least-squares methods, robustifications of the classical algorithms are discussed and the statistical properties of the novel methods are shown. A whole set of different approaches for the vertex finding problem is presented and compared in relevant physics channels

  10. Vertex Reconstruction in CMS

    CERN Document Server

    Chabanat, E; D'Hondt, J; Vanlaer, P; Prokofiev, K; Speer, T; Frühwirth, R; Waltenberger, W

    2005-01-01

    Because of the high track multiplicity in the final states expected in proton collisions at the LHC experiments, novel vertex reconstruction algorithms are required. The vertex reconstruction problem can be decomposed into a pattern recognition problem ("vertex finding") and an estimation problem ("vertex fitting"). Starting from least-square methods, ways to render the classical algorithms more robust are discussed and the statistical properties of the novel methods are shown. A whole set of different approaches for the vertex finding problem is presented and compared in relevant physics channels.

  11. Analysis, reconstruction and manipulation using arterial snakes

    KAUST Repository

    Li, Guo

    2010-01-01

    Man-made objects often consist of detailed and interleaving structures, which are created using cane, coils, metal wires, rods, etc. The delicate structures, although manufactured using simple procedures, are challenging to scan and reconstruct. We observe that such structures are inherently 1D, and hence are naturally represented using an arrangement of generating curves. We refer to the resultant surfaces as arterial surfaces. In this paper we approach for analyzing, reconstructing, and manipulating such arterial surfaces. The core of the algorithm is a novel deformable model, called arterial snake, that simultaneously captures the topology and geometry of the arterial objects. The recovered snakes produce a natural decomposition of the raw scans, with the decomposed parts often capturing meaningful object sections. We demonstrate the robustness of our algorithm on a variety of arterial objects corrupted with noise, outliers, and with large parts missing. We present a range of applications including reconstruction, topology repairing, and manipulation of arterial surfaces by directly controlling the underlying curve network and the associated sectional profiles, which are otherwise challenging to perform. © 2010 ACM.

  12. Hanford Environmental Dose Reconstruction Project

    International Nuclear Information System (INIS)

    McMakin, A.H.; Cannon, S.D.; Finch, S.M.

    1992-07-01

    The objective of the Hanford Environmental Dose Reconstruction (HEDR) Project is to estimate the radiation doses that individuals and populations could have received from nuclear operations at Hanford since 1944. The TSP consists of experts in environmental pathways, epidemiology, surface-water transport, ground-water transport, statistics, demography, agriculture, meteorology, nuclear engineering, radiation dosimetry, and cultural anthropology. Included are appointed technical members representing the states of Oregon, Washington, and Idaho, a representative of Native American tribes, and an individual representing the public. The project is divided into the following technical tasks. These tasks correspond to the path radionuclides followed from release to impact on humans (dose estimates): Source terms, environmental transport, environmental monitoring data, demography, food consumption, and agriculture, and environmental pathways and dose estimates. Progress is discussed

  13. Complementary studies of lipid membrane dynamics using iSCAT and super-resolved fluorescence correlation spectroscopy

    Science.gov (United States)

    Reina, Francesco; Galiani, Silvia; Shrestha, Dilip; Sezgin, Erdinc; de Wit, Gabrielle; Cole, Daniel; Lagerholm, B. Christoffer; Kukura, Philipp; Eggeling, Christian

    2018-06-01

    Observation techniques with high spatial and temporal resolution, such as single-particle tracking based on interferometric scattering (iSCAT) microscopy, and fluorescence correlation spectroscopy applied on a super-resolution STED microscope (STED-FCS), have revealed new insights of the molecular organization of membranes. While delivering complementary information, there are still distinct differences between these techniques, most prominently the use of fluorescent dye tagged probes for STED-FCS and a need for larger scattering gold nanoparticle tags for iSCAT. In this work, we have used lipid analogues tagged with a hybrid fluorescent tag–gold nanoparticle construct, to directly compare the results from STED-FCS and iSCAT measurements of phospholipid diffusion on a homogeneous supported lipid bilayer (SLB). These comparative measurements showed that while the mode of diffusion remained free, at least at the spatial (>40 nm) and temporal (50  ⩽  t  ⩽  100 ms) scales probed, the diffussion coefficient was reduced by 20- to 60-fold when tagging with 20 and 40 nm large gold particles as compared to when using dye tagged lipid analogues. These FCS measurements of hybrid fluorescent tag–gold nanoparticle labeled lipids also revealed that commercially supplied streptavidin-coated gold nanoparticles contain large quantities of free streptavidin. Finally, the values of apparent diffusion coefficients obtained by STED-FCS and iSCAT differed by a factor of 2–3 across the techniques, while relative differences in mobility between different species of lipid analogues considered were identical in both approaches. In conclusion, our experiments reveal that large and potentially cross-linking scattering tags introduce a significant slow-down in diffusion on SLBs but no additional bias, and our labeling approach creates a new way of exploiting complementary information from STED-FCS and iSCAT measurements.

  14. Reconstructing Neutrino Mass Spectrum

    OpenAIRE

    Smirnov, A. Yu.

    1999-01-01

    Reconstruction of the neutrino mass spectrum and lepton mixing is one of the fundamental problems of particle physics. In this connection we consider two central topics: (i) the origin of large lepton mixing, (ii) possible existence of new (sterile) neutrino states. We discuss also possible relation between large mixing and existence of sterile neutrinos.

  15. The PRISM3D paleoenvironmental reconstruction

    Science.gov (United States)

    Dowsett, H.; Robinson, M.; Haywood, A.M.; Salzmann, U.; Hill, Daniel; Sohl, L.E.; Chandler, M.; Williams, Mark; Foley, K.; Stoll, D.K.

    2010-01-01

    The Pliocene Research, Interpretation and Synoptic Mapping (PRISM) paleoenvironmental reconstruction is an internally consistent and comprehensive global synthesis of a past interval of relatively warm and stable climate. It is regularly used in model studies that aim to better understand Pliocene climate, to improve model performance in future climate scenarios, and to distinguish model-dependent climate effects. The PRISM reconstruction is constantly evolving in order to incorporate additional geographic sites and environmental parameters, and is continuously refined by independent research findings. The new PRISM three dimensional (3D) reconstruction differs from previous PRISM reconstructions in that it includes a subsurface ocean temperature reconstruction, integrates geochemical sea surface temperature proxies to supplement the faunal-based temperature estimates, and uses numerical models for the first time to augment fossil data. Here we describe the components of PRISM3D and describe new findings specific to the new reconstruction. Highlights of the new PRISM3D reconstruction include removal of Hudson Bay and the Great Lakes and creation of open waterways in locations where the current bedrock elevation is less than 25m above modern sea level, due to the removal of the West Antarctic Ice Sheet and the reduction of the East Antarctic Ice Sheet. The mid-Piacenzian oceans were characterized by a reduced east-west temperature gradient in the equatorial Pacific, but PRISM3D data do not imply permanent El Niño conditions. The reduced equator-to-pole temperature gradient that characterized previous PRISM reconstructions is supported by significant displacement of vegetation belts toward the poles, is extended into the Arctic Ocean, and is confirmed by multiple proxies in PRISM3D. Arctic warmth coupled with increased dryness suggests the formation of warm and salty paleo North Atlantic Deep Water (NADW) and a more vigorous thermohaline circulation system that may

  16. Localized surface plasmon enhanced cellular imaging using random metallic structures

    Science.gov (United States)

    Son, Taehwang; Lee, Wonju; Kim, Donghyun

    2017-02-01

    We have studied fluorescence cellular imaging with randomly distributed localized near-field induced by silver nano-islands. For the fabrication of nano-islands, a 10-nm silver thin film evaporated on a BK7 glass substrate with an adhesion layer of 2-nm thick chromium. Micrometer sized silver square pattern was defined using e-beam lithography and then the film was annealed at 200°C. Raw images were restored using electric field distribution produced on the surface of random nano-islands. Nano-islands were modeled from SEM images. 488-nm p-polarized light source was set to be incident at 60°. Simulation results show that localized electric fields were created among nano-islands and that their average size was found to be 135 nm. The feasibility was tested using conventional total internal reflection fluorescence microscopy while the angle of incidence was adjusted to maximize field enhancement. Mouse microphage cells were cultured on nano-islands, and actin filaments were selectively stained with FITC-conjugated phalloidin. Acquired images were deconvolved based on linear imaging theory, in which molecular distribution was sampled by randomly distributed localized near-field and blurred by point spread function of far-field optics. The optimum fluorophore distribution was probabilistically estimated by repetitively matching a raw image. The deconvolved images are estimated to have a resolution in the range of 100-150 nm largely determined by the size of localized near-fields. We also discuss and compare the results with images acquired with periodic nano-aperture arrays in various optical configurations to excite localized plasmonic fields and to produce super-resolved molecular images.

  17. Algebraic reconstruction techniques for spectral reconstruction in diffuse optical tomography

    International Nuclear Information System (INIS)

    Brendel, Bernhard; Ziegler, Ronny; Nielsen, Tim

    2008-01-01

    Reconstruction in diffuse optical tomography (DOT) necessitates solving the diffusion equation, which is nonlinear with respect to the parameters that have to be reconstructed. Currently applied solving methods are based on the linearization of the equation. For spectral three-dimensional reconstruction, the emerging equation system is too large for direct inversion, but the application of iterative methods is feasible. Computational effort and speed of convergence of these iterative methods are crucial since they determine the computation time of the reconstruction. In this paper, the iterative methods algebraic reconstruction technique (ART) and conjugated gradients (CGs) as well as a new modified ART method are investigated for spectral DOT reconstruction. The aim of the modified ART scheme is to speed up the convergence by considering the specific conditions of spectral reconstruction. As a result, it converges much faster to favorable results than conventional ART and CG methods

  18. Desorption, dissociation and orientation of oxygen admolecules on a reconstructed platinum(110)(1x2) surface studied by thermal desorption and near-edge X-ray-absorption fine-structure

    International Nuclear Information System (INIS)

    Ohno, Yuichi; Matsushima, Tatsuo; Tanaka, Shin-ichiro; Kamada, Masao

    1993-01-01

    The desorption, dissociation and orientation of oxygen admolecules on a reconstructed Pt(110)(1x2) were studied by means of TDS combined with isotope tracer, NEXAFS, and angle-resolved TDS. The admolecules below half a monolayer lie on the bottom of the trough, being oriented along it. The molecules adsorbed additionally are lying on declining terraces. The desorption flux of the former species shows a simple cosine distribution, suggesting that the molecule is not localized on the bottom in the desorption event. (author)

  19. Reconstruction and Analysis of Shapes from 3D Scans

    NARCIS (Netherlands)

    Haar, F.B. ter

    2009-01-01

    In this thesis, we measure 3D shapes with the use of 3D laser technology, a recent technology that combines physics, mathematics, and computer science to acquire the surface geometry of 3D shapes in the computer. We use this surface geometry to fully reconstruct real world shapes as computer models,

  20. Arctic Sea Level Reconstruction

    DEFF Research Database (Denmark)

    Svendsen, Peter Limkilde

    Reconstruction of historical Arctic sea level is very difficult due to the limited coverage and quality of tide gauge and altimetry data in the area. This thesis addresses many of these issues, and discusses strategies to help achieve a stable and plausible reconstruction of Arctic sea level from...... 1950 to today.The primary record of historical sea level, on the order of several decades to a few centuries, is tide gauges. Tide gauge records from around the world are collected in the Permanent Service for Mean Sea Level (PSMSL) database, and includes data along the Arctic coasts. A reasonable...... amount of data is available along the Norwegian and Russian coasts since 1950, and most published research on Arctic sea level extends cautiously from these areas. Very little tide gauge data is available elsewhere in the Arctic, and records of a length of several decades,as generally recommended for sea...

  1. Reconstructing warm inflation

    Science.gov (United States)

    Herrera, Ramón

    2018-03-01

    The reconstruction of a warm inflationary universe model from the scalar spectral index n_S(N) and the tensor to scalar ratio r( N) as a function of the number of e-folds N is studied. Under a general formalism we find the effective potential and the dissipative coefficient in terms of the cosmological parameters n_S and r considering the weak and strong dissipative stages under the slow roll approximation. As a specific example, we study the attractors for the index n_S given by nS-1∝ N^{-1} and for the ratio r∝ N^{-2}, in order to reconstruct the model of warm inflation. Here, expressions for the effective potential V(φ ) and the dissipation coefficient Γ (φ ) are obtained.

  2. Jet Vertex Charge Reconstruction

    CERN Document Server

    Nektarijevic, Snezana; The ATLAS collaboration

    2015-01-01

    A newly developed algorithm called the jet vertex charge tagger, aimed at identifying the sign of the charge of jets containing $b$-hadrons, referred to as $b$-jets, is presented. In addition to the well established track-based jet charge determination, this algorithm introduces the so-called \\emph{jet vertex charge} reconstruction, which exploits the charge information associated to the displaced vertices within the jet. Furthermore, the charge of a soft muon contained in the jet is taken into account when available. All available information is combined into a multivariate discriminator. The algorithm has been developed on jets matched to generator level $b$-hadrons provided by $t\\bar{t}$ events simulated at $\\sqrt{s}$=13~TeV using the full ATLAS detector simulation and reconstruction.

  3. Segmentation-DrivenTomographic Reconstruction

    DEFF Research Database (Denmark)

    Kongskov, Rasmus Dalgas

    such that the segmentation subsequently can be carried out by use of a simple segmentation method, for instance just a thresholding method. We tested the advantages of going from a two-stage reconstruction method to a one stage segmentation-driven reconstruction method for the phase contrast tomography reconstruction......The tomographic reconstruction problem is concerned with creating a model of the interior of an object from some measured data, typically projections of the object. After reconstructing an object it is often desired to segment it, either automatically or manually. For computed tomography (CT...

  4. LHCb jet reconstruction

    International Nuclear Information System (INIS)

    Francisco, Oscar; Rangel, Murilo; Barter, William; Bursche, Albert; Potterat, Cedric; Coco, Victor

    2012-01-01

    Full text: The Large Hadron Collider (LHC) is the most powerful particle accelerator in the world. It has been designed to collide proton beams at an energy up to 14 TeV in the center of mass. In 2011, the data taking was done with a center of mass energy of 7 TeV, the instant luminosity has reached values greater than 4 X 10 32 cm -2 s -1 and the integrated luminosity reached the value of 1,02fb -1 on the LHCb. The jet reconstruction is fundamental to observe events that can be used to test perturbative QCD (pQCD). It also provides a way to observe standard model channels and searches for new physics like SUSY. The anti-kt algorithm is a jet reconstruction algorithm that is based on the distance of the particles on the space ηX φ and on the transverse momentum of particles. To maximize the energy resolution all information about the trackers and the colorimeters are used on the LHCb experiment to create objects called particle flow objects that are used as input to anti-kt algorithm. The LHCb is specially interesting for jets studies because its η region is complementary to the others main experiments on LHC. We will present the first results of jet reconstruction using 2011 LHCb data. (author)

  5. LHCb jet reconstruction

    Energy Technology Data Exchange (ETDEWEB)

    Francisco, Oscar; Rangel, Murilo [Universidade Federal do Rio de Janeiro (UFRJ), RJ (Brazil); Barter, William [University of Cambridge, Cambridge (United Kingdom); Bursche, Albert [Universitat Zurich, Zurich (Switzerland); Potterat, Cedric [Universitat de Barcelona, Barcelona (Spain); Coco, Victor [Nikhef National Institute for Subatomic Physics, Amsterdam (Netherlands)

    2012-07-01

    Full text: The Large Hadron Collider (LHC) is the most powerful particle accelerator in the world. It has been designed to collide proton beams at an energy up to 14 TeV in the center of mass. In 2011, the data taking was done with a center of mass energy of 7 TeV, the instant luminosity has reached values greater than 4 X 10{sup 32} cm{sup -2}s{sup -1} and the integrated luminosity reached the value of 1,02fb{sup -1} on the LHCb. The jet reconstruction is fundamental to observe events that can be used to test perturbative QCD (pQCD). It also provides a way to observe standard model channels and searches for new physics like SUSY. The anti-kt algorithm is a jet reconstruction algorithm that is based on the distance of the particles on the space {eta}X {phi} and on the transverse momentum of particles. To maximize the energy resolution all information about the trackers and the colorimeters are used on the LHCb experiment to create objects called particle flow objects that are used as input to anti-kt algorithm. The LHCb is specially interesting for jets studies because its {eta} region is complementary to the others main experiments on LHC. We will present the first results of jet reconstruction using 2011 LHCb data. (author)

  6. 3D Reconstruction of NMR Images by LabVIEW

    Directory of Open Access Journals (Sweden)

    Peter IZAK

    2007-01-01

    Full Text Available This paper introduces the experiment of 3D reconstruction NMR images via virtual instrumentation - LabVIEW. The main idea is based on marching cubes algorithm and image processing implemented by module of Vision assistant. The two dimensional images shot by the magnetic resonance device provide information about the surface properties of human body. There is implemented algorithm which can be used for 3D reconstruction of magnetic resonance images in biomedical application.

  7. Image Reconstruction For Bioluminescence Tomography From Partial Measurement

    OpenAIRE

    Jiang, M.; Zhou, T.; Cheng, J. T.; Cong, W. X.; Wang, Ge

    2007-01-01

    The bioluminescence tomography is a novel molecular imaging technology for small animal studies. Known reconstruction methods require the completely measured data on the external surface, although only partially measured data is available in practice. In this work, we formulate a mathematical model for BLT from partial data and generalize our previous results on the solution uniqueness to the partial data case. Then we extend two of our reconstruction methods for BLT to this case. The first m...

  8. Structured Light-Based 3D Reconstruction System for Plants

    OpenAIRE

    Nguyen, Thuy Tuong; Slaughter, David C.; Max, Nelson; Maloof, Julin N.; Sinha, Neelima

    2015-01-01

    Camera-based 3D reconstruction of physical objects is one of the most popular computer vision trends in recent years. Many systems have been built to model different real-world subjects, but there is lack of a completely robust system for plants. This paper presents a full 3D reconstruction system that incorporates both hardware structures (including the proposed structured light system to enhance textures on object surfaces) and software algorithms (including the proposed 3D point cloud regi...

  9. Extremal surface barriers

    International Nuclear Information System (INIS)

    Engelhardt, Netta; Wall, Aron C.

    2014-01-01

    We present a generic condition for Lorentzian manifolds to have a barrier that limits the reach of boundary-anchored extremal surfaces of arbitrary dimension. We show that any surface with nonpositive extrinsic curvature is a barrier, in the sense that extremal surfaces cannot be continuously deformed past it. Furthermore, the outermost barrier surface has nonnegative extrinsic curvature. Under certain conditions, we show that the existence of trapped surfaces implies a barrier, and conversely. In the context of AdS/CFT, these barriers imply that it is impossible to reconstruct the entire bulk using extremal surfaces. We comment on the implications for the firewall controversy

  10. [Reconstructive methods after Fournier gangrene].

    Science.gov (United States)

    Wallner, C; Behr, B; Ring, A; Mikhail, B D; Lehnhardt, M; Daigeler, A

    2016-04-01

    Fournier's gangrene is a variant of the necrotizing fasciitis restricted to the perineal and genital region. It presents as an acute life-threatening disease and demands rapid surgical debridement, resulting in large soft tissue defects. Various reconstructive methods have to be applied to reconstitute functionality and aesthetics. The objective of this work is to identify different reconstructive methods in the literature and compare them to our current concepts for reconstructing defects caused by Fournier gangrene. Analysis of the current literature and our reconstructive methods on Fournier gangrene. The Fournier gangrene is an emergency requiring rapid, calculated antibiotic treatment and radical surgical debridement. After the acute phase of the disease, appropriate reconstructive methods are indicated. The planning of the reconstruction of the defect depends on many factors, especially functional and aesthetic demands. Scrotal reconstruction requires a higher aesthetic and functional reconstructive degree than perineal cutaneous wounds. In general, thorough wound hygiene, proper pre-operative planning, and careful consideration of the patient's demands are essential for successful reconstruction. In the literature, various methods for reconstruction after Fournier gangrene are described. Reconstruction with a flap is required for a good functional result in complex regions as the scrotum and penis, while cutaneous wounds can be managed through skin grafting. Patient compliance and tissue demand are crucial factors in the decision-making process.

  11. Penile surgery and reconstruction.

    Science.gov (United States)

    Perovic, Sava V; Djordjevic, Miroslav L J; Kekic, Zoran K; Djakovic, Nenad G

    2002-05-01

    This review will highlight recent advances in the field of penile reconstructive surgery in the paediatric and adult population. It is based on the work published during the year 2001. Besides the anatomical and histological studies of the penis, major contributions have been described in congenital and acquired penile anomalies. Also, a few new techniques and modifications of old procedures are described in order to improve the final functional and aesthetic outcome. The techniques for penile enlargement present a trend in the new millennium, but are still at the stage of investigation.

  12. Progressive Reconstruction: A Methodology for Stabilization and Reconstruction Operations

    National Research Council Canada - National Science Library

    Rohr, Karl C

    2006-01-01

    ... these nations in accordance with stated United States' goals. The argument follows closely current and developing United States military doctrine on stabilization, reconstruction, and counterinsurgency operations...

  13. On the reconstruction of Lifshitz spacetimes

    International Nuclear Information System (INIS)

    Gentle, Simon A.; Keeler, Cynthia

    2016-01-01

    We consider the reconstruction of a Lifshitz spacetime from three perspectives: differential entropy (or ‘hole-ography’), causal wedges and entanglement wedges. We find that not all time-varying bulk curves in vacuum Lifshitz can be reconstructed via the differential entropy approach, adding a caveat to the general analysis of http://dx.doi.org/10.1007/JHEP10(2014)149. We show that the causal wedge for Lifshitz spacetimes degenerates, while the entanglement wedge requires the additional consideration of a set of boundary-emanating light-sheets. The need to include bulk surfaces with no clear field theory interpretation in the differential entropy construction and the change in the entanglement wedge formation both serve as warnings against a naive application of holographic entanglement entropy proposals in Lifshitz spacetimes.

  14. Synchronized dynamic dose reconstruction

    International Nuclear Information System (INIS)

    Litzenberg, Dale W.; Hadley, Scott W.; Tyagi, Neelam; Balter, James M.; Ten Haken, Randall K.; Chetty, Indrin J.

    2007-01-01

    Variations in target volume position between and during treatment fractions can lead to measurable differences in the dose distribution delivered to each patient. Current methods to estimate the ongoing cumulative delivered dose distribution make idealized assumptions about individual patient motion based on average motions observed in a population of patients. In the delivery of intensity modulated radiation therapy (IMRT) with a multi-leaf collimator (MLC), errors are introduced in both the implementation and delivery processes. In addition, target motion and MLC motion can lead to dosimetric errors from interplay effects. All of these effects may be of clinical importance. Here we present a method to compute delivered dose distributions for each treatment beam and fraction, which explicitly incorporates synchronized real-time patient motion data and real-time fluence and machine configuration data. This synchronized dynamic dose reconstruction method properly accounts for the two primary classes of errors that arise from delivering IMRT with an MLC: (a) Interplay errors between target volume motion and MLC motion, and (b) Implementation errors, such as dropped segments, dose over/under shoot, faulty leaf motors, tongue-and-groove effect, rounded leaf ends, and communications delays. These reconstructed dose fractions can then be combined to produce high-quality determinations of the dose distribution actually received to date, from which individualized adaptive treatment strategies can be determined

  15. LHCb; LHCb Jet Reconstruction

    CERN Multimedia

    Augusto, O

    2012-01-01

    The Large Hadron Collider (LHC) is the most powerful particle accelerator in the world. It has been designed to collide proton beams at an energy up to 14 TeV in the center of mass. In 2011, the data taking was done with a center of mass energy of 7 TeV, the instant luminosity has reached values greater than $4 \\times 10^{32} cm^{-2} s^{-1}$ and the integrated luminosity reached the value of 1.02 $fb^{-1}$ on the LHCb. The jet reconstruction is fundamental to observe events that can be used to test pertubative QCD (pQCD). It also provides a way to observe standard model channels and searches for new physics like SUSY. The anti-kt algorithm is a jet reconstruction algorithm that is based on the distance of the particles on the space $\\eta \\times \\phi$ and on the transverse momentum of particles. To maximize the energy resolution all information about the trackers and the calo...

  16. Three-dimensional ICT reconstruction

    International Nuclear Information System (INIS)

    Zhang Aidong; Li Ju; Chen Fa; Sun Lingxia

    2005-01-01

    The three-dimensional ICT reconstruction method is the hot topic of recent ICT technology research. In the context, qualified visual three-dimensional ICT pictures are achieved through multi-piece two-dimensional images accumulation by, combining with thresholding method and linear interpolation. Different direction and different position images of the reconstructed pictures are got by rotation and interception respectively. The convenient and quick method is significantly instructive to more complicated three-dimensional reconstruction of ICT images. (authors)

  17. Three-dimensional ICT reconstruction

    International Nuclear Information System (INIS)

    Zhang Aidong; Li Ju; Chen Fa; Sun Lingxia

    2004-01-01

    The three-dimensional ICT reconstruction method is the hot topic of recent ICT technology research. In the context qualified visual three-dimensional ICT pictures are achieved through multi-piece two-dimensional images accumulation by order, combining with thresholding method and linear interpolation. Different direction and different position images of the reconstructed pictures are got by rotation and interception respectively. The convenient and quick method is significantly instructive to more complicated three-dimensional reconstruction of ICT images. (authors)

  18. Magnetic flux reconstruction methods for shaped tokamaks

    International Nuclear Information System (INIS)

    Tsui, Chi-Wa.

    1993-12-01

    The use of a variational method permits the Grad-Shafranov (GS) equation to be solved by reducing the problem of solving the 2D non-linear partial differential equation to the problem of minimizing a function of several variables. This high speed algorithm approximately solves the GS equation given a parameterization of the plasma boundary and the current profile (p' and FF' functions). The author treats the current profile parameters as unknowns. The goal is to reconstruct the internal magnetic flux surfaces of a tokamak plasma and the toroidal current density profile from the external magnetic measurements. This is a classic problem of inverse equilibrium determination. The current profile parameters can be evaluated by several different matching procedures. Matching of magnetic flux and field at the probe locations using the Biot-Savart law and magnetic Green's function provides a robust method of magnetic reconstruction. The matching of poloidal magnetic field on the plasma surface provides a unique method of identifying the plasma current profile. However, the power of this method is greatly compromised by the experimental errors of the magnetic signals. The Casing Principle provides a very fast way to evaluate the plasma contribution to the magnetic signals. It has the potential of being a fast matching method. The performance of this method is hindered by the accuracy of the poloidal magnetic field computed from the equilibrium solver. A flux reconstruction package has been implemented which integrates a vacuum field solver using a filament model for the plasma, a multi-layer perception neural network as an interface, and the volume integration of plasma current density using Green's functions as a matching method for the current profile parameters. The flux reconstruction package is applied to compare with the ASEQ and EFIT data. The results are promising

  19. Virtual 3-D Facial Reconstruction

    Directory of Open Access Journals (Sweden)

    Martin Paul Evison

    2000-06-01

    Full Text Available Facial reconstructions in archaeology allow empathy with people who lived in the past and enjoy considerable popularity with the public. It is a common misconception that facial reconstruction will produce an exact likeness; a resemblance is the best that can be hoped for. Research at Sheffield University is aimed at the development of a computer system for facial reconstruction that will be accurate, rapid, repeatable, accessible and flexible. This research is described and prototypical 3-D facial reconstructions are presented. Interpolation models simulating obesity, ageing and ethnic affiliation are also described. Some strengths and weaknesses in the models, and their potential for application in archaeology are discussed.

  20. Entropy and transverse section reconstruction

    International Nuclear Information System (INIS)

    Gullberg, G.T.

    1976-01-01

    A new approach to the reconstruction of a transverse section using projection data from multiple views incorporates the concept of maximum entropy. The principle of maximizing information entropy embodies the assurance of minimizing bias or prejudice in the reconstruction. Using maximum entropy is a necessary condition for the reconstructed image. This entropy criterion is most appropriate for 3-D reconstruction of objects from projections where the system is underdetermined or the data are limited statistically. This is the case in nuclear medicine time limitations in patient studies do not yield sufficient projections

  1. Confidence and sensitivity of sea-level reconstructions

    DEFF Research Database (Denmark)

    Svendsen, Peter Limkilde

    For the last two decades, satellite altimetry has provided a near-global view of spatial and temporal patterns in sea surface height (SSH). When combined with records from tide gauges, a historical reconstruction of sea level can be obtained; while tide gauge records span up to 200 years back...... nature of the data fields. We examine the sensitivity of a reconstruction with respect to the length of calibration time series, and the spatial distribution of tide gauges or other proxy data. In addition, we consider the eect of isolating certain physical phenomena (e.g. ENSO) and annual signals...... and modelling these outside the reconstruction. The implementation is currently based on data from compound satellite datasets (i.e., two decades of altimetry), and the Simple Ocean Data Assimilation (SODA) model, an existing reconstruction, where a calibration period can be easily extracted and our model...

  2. Urgent reconstruction and re-equipping of coking plants

    Energy Technology Data Exchange (ETDEWEB)

    Kvitkin, I.A.; Martynenko, V.M.; Rozenfel' d, M.S.; Svyatogorov, A.A.; Shvartsman, I.G.

    1986-03-01

    This paper discusses the various options involved: complete or partial reconstruction of existing buildings and equipment or new construction with new equipment and new underground and surface communications. It explains that reconstruction work is divided into three phases: initial phase (clearance, dismantling, closing down coking batteries); basic phase (fitting heat-resistant materials, prestart-up assembly work); final phase (drying out, heating up, adjustments, start-up). A structured scheme for a typical initial phase is described and a method of calculating the durations of the various phases is discussed. Conclusion is that there is an urgent requirement for a document to be produced for the control of reconstruction work; it should contain standard durations and could serve as a standard for coking plant reconstruction work.

  3. Enhancing temporal correlations in EOF expansions for the reconstruction of missing data using DINEOF

    Directory of Open Access Journals (Sweden)

    A. Alvera-Azcárate

    2009-10-01

    Full Text Available DINEOF (Data Interpolating Empirical Orthogonal Functions is an EOF-based technique for the reconstruction of missing data in geophysical fields, such as those produced by clouds in sea surface temperature satellite images. A technique to reduce spurious time variability in DINEOF reconstructions is presented. The reconstruction of these images within a long time series using DINEOF can lead to large discontinuities in the reconstruction. Filtering the temporal covariance matrix allows to reduce this spurious variability and therefore more realistic reconstructions are obtained. The approach is tested in a three years sea surface temperature data set over the Black Sea. The effect of the filter in the temporal EOFs is presented, as well as some examples of the improvement achieved with the filtering in the SST reconstruction, both compared to the DINEOF approach without filtering.

  4. The crystal structure of a coxsackievirus B3-RD variant and a refined 9-angstrom cryo-electron microscopy reconstruction of the virus complexed with decay-accelerating factor (DAF) provide a new footprint of DAF on the virus surface.

    Science.gov (United States)

    Yoder, Joshua D; Cifuente, Javier O; Pan, Jieyan; Bergelson, Jeffrey M; Hafenstein, Susan

    2012-12-01

    The coxsackievirus-adenovirus receptor (CAR) and decay-accelerating factor (DAF) have been identified as cellular receptors for coxsackievirus B3 (CVB3). The first described DAF-binding isolate was obtained during passage of the prototype strain, Nancy, on rhabdomyosarcoma (RD) cells, which express DAF but very little CAR. Here, the structure of the resulting variant, CVB3-RD, has been solved by X-ray crystallography to 2.74 Å, and a cryo-electron microscopy reconstruction of CVB3-RD complexed with DAF has been refined to 9.0 Å. This new high-resolution structure permits us to correct an error in our previous view of DAF-virus interactions, providing a new footprint of DAF that bridges two adjacent protomers. The contact sites between the virus and DAF clearly encompass CVB3-RD residues recently shown to be required for binding to DAF; these residues interact with DAF short consensus repeat 2 (SCR2), which is known to be essential for virus binding. Based on the new structure, the mode of the DAF interaction with CVB3 differs significantly from the mode reported previously for DAF binding to echoviruses.

  5. Orbital Reconstruction: Patient-Specific Orbital Floor Reconstruction Using a Mirroring Technique and a Customized Titanium Mesh.

    Science.gov (United States)

    Tarsitano, Achille; Badiali, Giovanni; Pizzigallo, Angelo; Marchetti, Claudio

    2016-10-01

    Enophthalmos is a severe complication of primary reconstruction of orbital floor fractures. The goal of secondary reconstruction procedures is to restore symmetrical globe positions to recover function and aesthetics. The authors propose a new method of orbital floor reconstruction using a mirroring technique and a customized titanium mesh, printed using a direct metal laser-sintering method. This reconstructive protocol involves 4 steps: mirroring of the healthy orbit at the affected site, virtual design of a patient-specific orbital floor mesh, CAM procedures for direct laser-sintering of the customized titanium mesh, and surgical insertion of the device. Using a computed tomography data set, the normal, uninjured side of the craniofacial skeleton was reflected onto the contralateral injured side, and a reconstructive orbital floor mesh was designed virtually on the mirrored orbital bone surface. The solid-to-layer files of the mesh were then manufactured using direct metal laser sintering, which resolves the shaping and bending biases inherent in the indirect method. An intraoperative navigation system ensured accuracy of the entire procedure. Clinical outcomes were assessed using 3dMD photogrammetry and computed tomography data in 7 treated patients. The technique described here appears to be a viable method to correct complex orbital floor defects needing delayed reconstruction. This study represents the first step in the development of a wider experimental protocol for orbital floor reconstruction using computer-assisted design-computer-assisted manufacturing technology.

  6. 3D reconstruction of SEM images by use of optical photogrammetry software.

    Science.gov (United States)

    Eulitz, Mona; Reiss, Gebhard

    2015-08-01

    Reconstruction of the three-dimensional (3D) surface of an object to be examined is widely used for structure analysis in science and many biological questions require information about their true 3D structure. For Scanning Electron Microscopy (SEM) there has been no efficient non-destructive solution for reconstruction of the surface morphology to date. The well-known method of recording stereo pair images generates a 3D stereoscope reconstruction of a section, but not of the complete sample surface. We present a simple and non-destructive method of 3D surface reconstruction from SEM samples based on the principles of optical close range photogrammetry. In optical close range photogrammetry a series of overlapping photos is used to generate a 3D model of the surface of an object. We adapted this method to the special SEM requirements. Instead of moving a detector around the object, the object itself was rotated. A series of overlapping photos was stitched and converted into a 3D model using the software commonly used for optical photogrammetry. A rabbit kidney glomerulus was used to demonstrate the workflow of this adaption. The reconstruction produced a realistic and high-resolution 3D mesh model of the glomerular surface. The study showed that SEM micrographs are suitable for 3D reconstruction by optical photogrammetry. This new approach is a simple and useful method of 3D surface reconstruction and suitable for various applications in research and teaching. Copyright © 2015 Elsevier Inc. All rights reserved.

  7. Optimal reconstruction angles

    International Nuclear Information System (INIS)

    Cook, G.O. Jr.; Knight, L.

    1979-07-01

    The question of optimal projection angles has recently become of interest in the field of reconstruction from projections. Here, studies are concentrated on the n x n pixel space, where literative algorithms such as ART and direct matrix techniques due to Katz are considered. The best angles are determined in a Gauss--Markov statistical sense as well as with respect to a function-theoretical error bound. The possibility of making photon intensity a function of angle is also examined. Finally, the best angles to use in an ART-like algorithm are studied. A certain set of unequally spaced angles was found to be preferred in several contexts. 15 figures, 6 tables

  8. Reconstructing European forest management from 1600 to 2010

    Science.gov (United States)

    McGrath, M. J.; Luyssaert, S.; Meyfroidt, P.; Kaplan, J. O.; Buergi, M.; Chen, Y.; Erb, K.; Gimmi, U.; McInerney, D.; Naudts, K.; Otto, J.; Pasztor, F.; Ryder, J.; Schelhaas, M.-J.; Valade, A.

    2015-04-01

    European forest use for fuel, timber and food dates back to pre-Roman times. Century-scale ecological processes and their legacy effects require accounting for forest management when studying today's forest carbon sink. Forest management reconstructions that are used to drive land surface models are one way to quantify the impact of both historical and today's large scale application of forest management on today's forest-related carbon sink and surface climate. In this study we reconstruct European forest management from 1600 to 2010 making use of diverse approaches, data sources and assumptions. Between 1600 and 1828, a demand-supply approach was used in which wood supply was reconstructed based on estimates of historical annual wood increment and land cover reconstructions. For the same period demand estimates accounted for the fuelwood needed in households, wood used in food processing, charcoal used in metal smelting and salt production, timber for construction and population estimates. Comparing estimated demand and supply resulted in a spatially explicit reconstruction of the share of forests under coppice, high stand management and forest left unmanaged. For the reconstruction between 1829 and 2010 a supply-driven back-casting method was used. The method used age reconstructions from the years 1950 to 2010 as its starting point. Our reconstruction reproduces the most important changes in forest management between 1600 and 2010: (1) an increase of 593 000 km2 in conifers at the expense of deciduous forest (decreasing by 538 000 km2), (2) a 612 000 km2 decrease in unmanaged forest, (3) a 152 000 km2 decrease in coppice management, (4) a 818 000 km2 increase in high stand management, and (5) the rise and fall of litter raking which at its peak in 1853 removed 50 Tg dry litter per year.

  9. CRUCIATE LIGAMENT RECONSTRUCTION

    Directory of Open Access Journals (Sweden)

    A. V. Korolev

    2016-01-01

    Full Text Available Purpose: To evaluate long-term results of meniscal repair during arthroscopic ACL reconstruction.Materials and methods: 45 patients who underwent meniscal repair during arthroscopic ACL reconstruction between 2007 and 2013 by the same surgeon were included in the study. In total, fifty meniscus were repaired (26 medial and 24 lateral. Procedures included use of one up to four Fast-Fix implants (Smith & Nephew. In five cases both medial and lateral meniscus were repaired. Cincinnati, IKDC and Lysholm scales were used for long-term outcome analysis.Results: 19 male and 26 female patients were included in the study aging from 15 to 59 years (mean age 33,2±1,5. Median time from injury to surgical procedure was zero months (ranging zero to one. Mean time from surgery to scale analysis was 55,9±3 months (ranged 20-102. Median Cincinnati score was 97 (ranged 90-100, with excellent results in 93% of cases (43 patients and good results in 7% (3 patients. Median IKDC score was 90,8 (ranged 86,2-95,4, with excellent outcomes in 51% of cases (23 patients, good in 33% (15 patients and satisfactory in 16% (7 patients. Median Lysholm score was 95 (ranged 90-100, with excellent outcomes in 76% of cases (34 patients and good in 24% (11 patients. Authors identified no statistical differences when comparing survey results in age, sex and time from trauma to surgery.Conclusions: Results of the present study match the data from orthopedic literature that prove meniscal repair as a safe and efficient procedure with good and excellent outcomes. All-inside meniscal repair can be used irrespectively of patients' age and is efficient even in case of delayed procedures.

  10. Reconstruction of electric systems (ELE)

    International Nuclear Information System (INIS)

    Kohutovic, P.

    2001-01-01

    The original design of WWER-230 units consisted of a single common system EEPS (essential electric power supply system) per unit. The establishment of redundancy 2 x 100% EEPS was a global task. The task was started during the 'Small reconstruction' - MR V1, continued in 'Gradual reconstruction' and finished in the year 2000. (author)

  11. Breast Reconstruction Following Cancer Treatment.

    Science.gov (United States)

    Gerber, Bernd; Marx, Mario; Untch, Michael; Faridi, Andree

    2015-08-31

    About 8000 breast reconstructions after mastectomy are per - formed in Germany each year. It has become more difficult to advise patients because of the wide variety of heterologous and autologous techniques that are now available and because of changes in the recommendations about radiotherapy. This article is based on a review of pertinent articles (2005-2014) that were retrieved by a selective search employing the search terms "mastectomy" and "breast reconstruction." The goal of reconstruction is to achieve an oncologically safe and aestically satisfactory result for the patient over the long term. Heterologous, i.e., implant-based, breast reconstruction (IBR) and autologous breast reconstruction (ABR) are complementary techniques. Immediate reconstruction preserves the skin of the breast and its natural form and prevents the psychological trauma associated with mastectomy. If post-mastectomy radiotherapy (PMRT) is not indicated, implant-based reconstruction with or without a net/acellular dermal matrix (ADM) is a common option. Complications such as seroma formation, infection, and explantation are significantly more common when an ADM is used (15.3% vs. 5.4% ). If PMRT is performed, then the complication rate of implant-based breast reconstruction is 1 to 48% ; in particular, Baker grade III/IV capsular fibrosis occurs in 7 to 22% of patients, and the prosthesis must be explanted in 9 to 41% . Primary or, preferably, secondary autologous reconstruction is an alternative. The results of ABR are more stable over the long term, but the operation is markedly more complex. Autologous breast reconstruction after PMRT does not increase the risk of serious complications (20.5% vs. 17.9% without radiotherapy). No randomized controlled trials have yet been conducted to compare the reconstructive techniques with each other. If radiotherapy will not be performed, immediate reconstruction with an implant is recommended. On the other hand, if post-mastectomy radiotherapy

  12. Biofabrication and biomaterials for urinary tract reconstruction

    Directory of Open Access Journals (Sweden)

    Elsawy MM

    2017-05-01

    Full Text Available Moustafa M Elsawy,1–3 Achala de Mel1 1Division of Surgery and Interventional Science, Royal Free Hospital, NHS Trust, University College London (UCL, 2Division of Reconstructive Urology, University College London Hospitals (uclh, London, UK; 3Urology Department, School of Medicine, Alexandria, University, Alexandria, EgyptAbstract: Reconstructive urologists are constantly facing diverse and complex pathologies that require structural and functional restoration of urinary organs. There is always a demand for a biocompatible material to repair or substitute the urinary tract instead of using patient’s autologous tissues with its associated morbidity. Biomimetic approaches are tissue-engineering tactics aiming to tailor the material physical and biological properties to behave physiologically similar to the urinary system. This review highlights the different strategies to mimic urinary tissues including modifications in structure, surface chemistry, and cellular response of a range of biological and synthetic materials. The article also outlines the measures to minimize infectious complications, which might lead to graft failure. Relevant experimental and preclinical studies are discussed, as well as promising biomimetic approaches such as three-dimensional bioprinting. Keywords: reconstruction, biofunctionalization, tissue engineering, urinary tract

  13. Automatic Texture Optimization for 3D Urban Reconstruction

    Directory of Open Access Journals (Sweden)

    LI Ming

    2017-03-01

    Full Text Available In order to solve the problem of texture optimization in 3D city reconstruction by using multi-lens oblique images, the paper presents a method of seamless texture model reconstruction. At first, it corrects the radiation information of images by camera response functions and image dark channel. Then, according to the corresponding relevance between terrain triangular mesh surface model to image, implements occlusion detection by sparse triangulation method, and establishes the triangles' texture list of visible. Finally, combines with triangles' topology relationship in 3D triangular mesh surface model and means and variances of image, constructs a graph-cuts-based texture optimization algorithm under the framework of MRF(Markov random filed, to solve the discrete label problem of texture optimization selection and clustering, ensures the consistency of the adjacent triangles in texture mapping, achieves the seamless texture reconstruction of city. The experimental results verify the validity and superiority of our proposed method.

  14. Displacement disorder and reconstruction of the (001) face of tungsten

    International Nuclear Information System (INIS)

    Egorushkin, V.E.; Kul'ment'ev, A.I.; Savushkin, E.V.

    1992-01-01

    The reconstruction of the (001) border of tungsten is examined taking into consideration random static displacements of surface atoms in the high-temperature (1 x 1) phase. A microscopic model is proposed, in which the creation of c(2 x 2) phase is described as a transition of the Jahn-Teller type and an ordering of static displacements. It is shown that displacement disorder induces instability of (001) tungsten with respect to reconstruction. The effect of a uniform electric field on a disordered reconstructing surface is examined. A possible reason is given for pronounced differences in the results of investigations of the structural conversion of the (001) face in tungsten when different experimental methods are used

  15. Climate reconstruction from borehole temperatures influenced by groundwater flow

    Science.gov (United States)

    Kurylyk, B.; Irvine, D. J.; Tang, W.; Carey, S. K.; Ferguson, G. A. G.; Beltrami, H.; Bense, V.; McKenzie, J. M.; Taniguchi, M.

    2017-12-01

    Borehole climatology offers advantages over other climate reconstruction methods because further calibration steps are not required and heat is a ubiquitous subsurface property that can be measured from terrestrial boreholes. The basic theory underlying borehole climatology is that past surface air temperature signals are reflected in the ground surface temperature history and archived in subsurface temperature-depth profiles. High frequency surface temperature signals are attenuated in the shallow subsurface, whereas low frequency signals can be propagated to great depths. A limitation of analytical techniques to reconstruct climate signals from temperature profiles is that they generally require that heat flow be limited to conduction. Advection due to groundwater flow can thermally `contaminate' boreholes and result in temperature profiles being rejected for regional climate reconstructions. Although groundwater flow and climate change can result in contrasting or superimposed thermal disturbances, groundwater flow will not typically remove climate change signals in a subsurface thermal profile. Thus, climate reconstruction is still possible in the presence of groundwater flow if heat advection is accommodated in the conceptual and mathematical models. In this study, we derive a new analytical solution for reconstructing surface temperature history from borehole thermal profiles influenced by vertical groundwater flow. The boundary condition for the solution is composed of any number of sequential `ramps', i.e. periods with linear warming or cooling rates, during the instrumented and pre-observational periods. The boundary condition generation and analytical temperature modeling is conducted in a simple computer program. The method is applied to reconstruct climate in Winnipeg, Canada and Tokyo, Japan using temperature profiles recorded in hydrogeologically active environments. The results demonstrate that thermal disturbances due to groundwater flow and climate

  16. Evidence-Based ACL Reconstruction

    Directory of Open Access Journals (Sweden)

    E. Carlos RODRIGUEZ-MERCHAN

    2015-01-01

    Full Text Available There is controversy in the literature regarding a number of topics related to anterior cruciate ligament (ACLreconstruction. The purpose of this article is to answer the following questions: 1 Bone patellar tendon bone (BPTB reconstruction or hamstring reconstruction (HR; 2 Double bundle or single bundle; 3 Allograft or authograft; 4 Early or late reconstruction; 5 Rate of return to sports after ACL reconstruction; 6 Rate of osteoarthritis after ACL reconstruction. A Cochrane Library and PubMed (MEDLINE search of systematic reviews and meta-analysis related to ACL reconstruction was performed. The key words were: ACL reconstruction, systematic reviews and meta-analysis. The main criteria for selection were that the articles were systematic reviews and meta-analysesfocused on the aforementioned questions. Sixty-nine articles were found, but only 26 were selected and reviewed because they had a high grade (I-II of evidence. BPTB-R was associated with better postoperative knee stability but with a higher rate of morbidity. However, the results of both procedures in terms of functional outcome in the long-term were similar. The double-bundle ACL reconstruction technique showed better outcomes in rotational laxity, although functional recovery was similar between single-bundle and double-bundle. Autograft yielded better results than allograft. There was no difference between early and delayed reconstruction. 82% of patients were able to return to some kind of sport participation. 28% of patients presented radiological signs of osteoarthritis with a follow-up of minimum 10 years.

  17. Reconstructing human evolution

    CERN Multimedia

    AUTHOR|(CDS)2074069

    1999-01-01

    One can reconstruct human evolution using modern genetic data and models based on the mathematical theory of evolution and its four major factors : mutation, natural selection, statistical fluctuations in finite populations (random genetic drift), and migration. Archaeology gives some help on the major dates and events of the process. Chances of studying ancient DNA are very limited but there have been a few successful results. Studying DNA instead of proteins, as was done until a few years ago, and in particular the DNA of mitochondria and of the Y chromosome which are transmitted, respectively, by the maternal line and the paternal line, has greatly simplified the analysis. It is now possible to carry the analysis on individuals, while earlier studies were of necessity based on populations. Also the evolution of ÒcultureÓ (i.e. what we learn from others), in particular that of languages, gives some help and can be greatly enlightened by genetic studies. Even though it is largely based on mechanisms of mut...

  18. Reconstructing Topological Graphs and Continua

    OpenAIRE

    Gartside, Paul; Pitz, Max F.; Suabedissen, Rolf

    2015-01-01

    The deck of a topological space $X$ is the set $\\mathcal{D}(X)=\\{[X \\setminus \\{x\\}] \\colon x \\in X\\}$, where $[Z]$ denotes the homeomorphism class of $Z$. A space $X$ is topologically reconstructible if whenever $\\mathcal{D}(X)=\\mathcal{D}(Y)$ then $X$ is homeomorphic to $Y$. It is shown that all metrizable compact connected spaces are reconstructible. It follows that all finite graphs, when viewed as a 1-dimensional cell-complex, are reconstructible in the topological sense, and more genera...

  19. Tomographic reconstruction of binary fields

    International Nuclear Information System (INIS)

    Roux, Stéphane; Leclerc, Hugo; Hild, François

    2012-01-01

    A novel algorithm is proposed for reconstructing binary images from their projection along a set of different orientations. Based on a nonlinear transformation of the projection data, classical back-projection procedures can be used iteratively to converge to the sought image. A multiscale implementation allows for a faster convergence. The algorithm is tested on images up to 1 Mb definition, and an error free reconstruction is achieved with a very limited number of projection data, saving a factor of about 100 on the number of projections required for classical reconstruction algorithms.

  20. Reconstruction of Cell Surface Densities of Ion Pumps, Exchangers, and Channels from mRNA Expression, Conductance Kinetics, Whole-Cell Calcium, and Current-Clamp Voltage Recordings, with an Application to Human Uterine Smooth Muscle Cells.

    Directory of Open Access Journals (Sweden)

    Jolene Atia

    2016-04-01

    Full Text Available Uterine smooth muscle cells remain quiescent throughout most of gestation, only generating spontaneous action potentials immediately prior to, and during, labor. This study presents a method that combines transcriptomics with biophysical recordings to characterise the conductance repertoire of these cells, the 'conductance repertoire' being the total complement of ion channels and transporters expressed by an electrically active cell. Transcriptomic analysis provides a set of potential electrogenic entities, of which the conductance repertoire is a subset. Each entity within the conductance repertoire was modeled independently and its gating parameter values were fixed using the available biophysical data. The only remaining free parameters were the surface densities for each entity. We characterise the space of combinations of surface densities (density vectors consistent with experimentally observed membrane potential and calcium waveforms. This yields insights on the functional redundancy of the system as well as its behavioral versatility. Our approach couples high-throughput transcriptomic data with physiological behaviors in health and disease, and provides a formal method to link genotype to phenotype in excitable systems. We accurately predict current densities and chart functional redundancy. For example, we find that to evoke the observed voltage waveform, the BK channel is functionally redundant whereas hERG is essential. Furthermore, our analysis suggests that activation of calcium-activated chloride conductances by intracellular calcium release is the key factor underlying spontaneous depolarisations.

  1. A new method of morphological comparison for bony reconstructive surgery: maxillary reconstruction using scapular tip bone

    Science.gov (United States)

    Chan, Harley; Gilbert, Ralph W.; Pagedar, Nitin A.; Daly, Michael J.; Irish, Jonathan C.; Siewerdsen, Jeffrey H.

    2010-02-01

    esthetic appearance is one of the most important factors for reconstructive surgery. The current practice of maxillary reconstruction chooses radial forearm, fibula or iliac rest osteocutaneous to recreate three-dimensional complex structures of the palate and maxilla. However, these bone flaps lack shape similarity to the palate and result in a less satisfactory esthetic. Considering similarity factors and vasculature advantages, reconstructive surgeons recently explored the use of scapular tip myo-osseous free flaps to restore the excised site. We have developed a new method that quantitatively evaluates the morphological similarity of the scapula tip bone and palate based on a diagnostic volumetric computed tomography (CT) image. This quantitative result was further interpreted as a color map that rendered on the surface of a three-dimensional computer model. For surgical planning, this color interpretation could potentially assist the surgeon to maximize the orientation of the bone flaps for best fit of the reconstruction site. With approval from the Research Ethics Board (REB) of the University Health Network, we conducted a retrospective analysis with CT image obtained from 10 patients. Each patient had a CT scans including the maxilla and chest on the same day. Based on this image set, we simulated total, subtotal and hemi palate reconstruction. The procedure of simulation included volume segmentation, conversing the segmented volume to a stereo lithography (STL) model, manual registration, computation of minimum geometric distances and curvature between STL model. Across the 10 patients data, we found the overall root-mean-square (RMS) conformance was 3.71+/- 0.16 mm

  2. Application of CT three-dimensional reconstruction in elbow injury

    International Nuclear Information System (INIS)

    Liang Wenhua; Qian Li

    2009-01-01

    Objective: To investigate the application of multi-slice spiral CT in fracture of elbow, and to study the value of different methods of the reconstruction. Methods: Thin line cross-section spiral CT scan was carried out in 13 cases with elbow injury, three-dimensional reconstruction was completed later. Several reconstructed image quality to display f the elbow fracture and dislocation were analyzed and compared. Results: 13 cases (17) elbow trauma included humeral media epicondyle fracture, humeral external epicondyle fracture, intercondylar fracture, olecranal fracture and radial head fracture. Among them, X-ray film showed negative in three sites, showed suspect fractures in 2 cases, and only showed single fracture in 2 cases. MPR reconstruction image could not only identify the diagnosis of fracture, but also provide further multi-angle display on fracture line and the extent of articular surface involvement. Surface reconstruction technology could exclude the impact of passive elbow flexion and display elbow injury more intuitively. Conclusion The elbow fracture dislocation could be showed clearly in multi-slice spiral CT, especially for complex fractures, with unmatched advantages compared to X-ray for clinical diagnosis and treatment determination. (authors)

  3. Fast in vivo volume dose reconstruction via reference dose perturbation

    International Nuclear Information System (INIS)

    Lu, Weiguo; Chen, Mingli; Mo, Xiaohu; Parnell, Donald; Olivera, Gustavo; Galmarini, Daniel

    2014-01-01

    Purpose: Accurate on-line reconstruction of in-vivo volume dose that accounts for both machine and patient discrepancy is not clinically available. We present a simple reference-dose-perturbation algorithm that reconstructs in-vivo volume dose fast and accurately. Methods: We modelled the volume dose as a function of the fluence map and density image. Machine (output variation, jaw/leaf position errors, etc.) and patient (setup error, weight loss, etc.) discrepancies between the plan and delivery were modelled as perturbation of the fluence map and density image, respectively. Delivered dose is modelled as perturbation of the reference dose due to change of the fluence map and density image. We used both simulated and clinical data to validate the algorithm. The planned dose was used as the reference. The reconstruction was perturbed from the reference and accounted for output-variations and the registered daily image. The reconstruction was compared with the ground truth via isodose lines and the Gamma Index. Results: For various plans and geometries, the volume doses were reconstructed in few seconds. The reconstruction generally matched well with the ground truth. For the 3%/3mm criteria, the Gamma pass rates were 98% for simulations and 95% for clinical data. The differences mainly appeared on the surface of the phantom/patient. Conclusions: A novel reference-dose-perturbation dose reconstruction model is presented. The model accounts for machine and patient discrepancy from planning. The algorithm is simple, fast, yet accurate, which makes online in-vivo 3D dose reconstruction clinically feasible.

  4. Study of DNA reconstruction enzymes

    Energy Technology Data Exchange (ETDEWEB)

    Sekiguchi, M [Kyushu Univ., Fukuoka (Japan). Faculty of Science

    1976-12-01

    Description was made of the characteristics and mechanism of 3 reconstructive enzymes which received from M. luteus or E. coli or T4, and of which natures were clarified as reconstructive enzymes of DNA irradiated with ultraviolet rays. As characteristics, the site of breaking, reaction, molecular weight, electric charge in the neutrality and a specific adhesion to DNA irradiated with ultraviolet rays were mentioned. As to mutant of ultraviolet ray sensitivity, hereditary control mechanism of removal and reconstruction by endo-nuclease activation was described, and suggestion was referred to removal and reconstruction of cells of xedoderma pigmentosum which is a hereditary disease of human. Description was also made as to the mechanism of exonuclease activation which separates dimer selectively from irradiated DNA.

  5. Quantum Logic and Quantum Reconstruction

    OpenAIRE

    Stairs, Allen

    2015-01-01

    Quantum logic understood as a reconstruction program had real successes and genuine limitations. This paper offers a synopsis of both and suggests a way of seeing quantum logic in a larger, still thriving context.

  6. Reconstructing see-saw models

    International Nuclear Information System (INIS)

    Ibarra, Alejandro

    2007-01-01

    In this talk we discuss the prospects to reconstruct the high-energy see-saw Lagrangian from low energy experiments in supersymmetric scenarios. We show that the model with three right-handed neutrinos could be reconstructed in theory, but not in practice. Then, we discuss the prospects to reconstruct the model with two right-handed neutrinos, which is the minimal see-saw model able to accommodate neutrino observations. We identify the relevant processes to achieve this goal, and comment on the sensitivity of future experiments to them. We find the prospects much more promising and we emphasize in particular the importance of the observation of rare leptonic decays for the reconstruction of the right-handed neutrino masses

  7. Breast Reconstruction with Flap Surgery

    Science.gov (United States)

    ... augmented with a breast implant to achieve the desired breast size. Surgical methods Autologous tissue breast reconstruction ... as long as a year or two before feeling completely healed and back to normal. Future breast ...

  8. Rational reconstructions of modern physics

    CERN Document Server

    Mittelstaedt, Peter

    2013-01-01

    Newton’s classical physics and its underlying ontology are loaded with several metaphysical hypotheses that cannot be justified by rational reasoning nor by experimental evidence. Furthermore, it is well known that some of these hypotheses are not contained in the great theories of Modern Physics, such as the theory of Special Relativity and Quantum Mechanics. This book shows that, on the basis of Newton’s classical physics and by rational reconstruction, the theory of Special Relativity as well as Quantum Mechanics can be obtained by partly eliminating or attenuating the metaphysical hypotheses. Moreover, it is shown that these reconstructions do not require additional hypotheses or new experimental results. In the second edition the rational reconstructions are completed with respect to General Relativity and Cosmology. In addition, the statistics of quantum objects is elaborated in more detail with respect to the rational reconstruction of quantum mechanics. The new material completes the approach of t...

  9. Méthodologie de conception de motifs dirigée par la distance de Hamming : application à la reconstruction de surfaces à partir d'une seule image

    OpenAIRE

    Maurice , Xavier; Doignon , Christophe

    2012-01-01

    Session "Articles"; National audience; En vision artificielle par lumière structurée, la projection d'un motif sur un objet permet de capturer la forme de sa surface à un instant donné, en effectuant plusieurs acquisitions. Cette technique peut cependant s'avérer inefficace lorsque l'objet est en mouvement. Il devient alors nécessaire de ne faire appel qu'à une seule prise d'images pour analyser la forme d'une région d'intérêt en mouvement et des motifs intégrant des propriétés intrinsèques d...

  10. Petz recovery versus matrix reconstruction

    Science.gov (United States)

    Holzäpfel, Milan; Cramer, Marcus; Datta, Nilanjana; Plenio, Martin B.

    2018-04-01

    The reconstruction of the state of a multipartite quantum mechanical system represents a fundamental task in quantum information science. At its most basic, it concerns a state of a bipartite quantum system whose subsystems are subjected to local operations. We compare two different methods for obtaining the original state from the state resulting from the action of these operations. The first method involves quantum operations called Petz recovery maps, acting locally on the two subsystems. The second method is called matrix (or state) reconstruction and involves local, linear maps that are not necessarily completely positive. Moreover, we compare the quantities on which the maps employed in the two methods depend. We show that any state that admits Petz recovery also admits state reconstruction. However, the latter is successful for a strictly larger set of states. We also compare these methods in the context of a finite spin chain. Here, the state of a finite spin chain is reconstructed from the reduced states of a few neighbouring spins. In this setting, state reconstruction is the same as the matrix product operator reconstruction proposed by Baumgratz et al. [Phys. Rev. Lett. 111, 020401 (2013)]. Finally, we generalize both these methods so that they employ long-range measurements instead of relying solely on short-range correlations embodied in such local reduced states. Long-range measurements enable the reconstruction of states which cannot be reconstructed from measurements of local few-body observables alone and hereby we improve existing methods for quantum state tomography of quantum many-body systems.

  11. Animated Reconstruction of Forensic Animation

    OpenAIRE

    Hala, Albert; Unver, Ertu

    1998-01-01

    An animated accident display in court can be significant evidentiary tool. Computer graphics animation reconstructions which can be shown in court are cost effective, save valuable time and illustrate complex and technical issues, are realistic and can prove or disprove arguments or theories with reference to the perplexing newtonian physics involved in many accidents: this technology may well revolutionise accident reconstruction, thus enabling prosecution and defence to be more effective in...

  12. Equilibrium Reconstruction in EAST Tokamak

    International Nuclear Information System (INIS)

    Qian Jinping; Wan Baonian; Shen Biao; Sun Youwen; Liu Dongmei; Xiao Bingjia; Ren Qilong; Gong Xianzu; Li Jiangang; Lao, L. L.; Sabbagh, S. A.

    2009-01-01

    Reconstruction of experimental axisymmetric equilibria is an important part of tokamak data analysis. Fourier expansion is applied to reconstruct the vessel current distribution in EFIT code. Benchmarking and testing calculations are performed to evaluate and validate this algorithm. Two cases for circular and non-circular plasma discharges are presented. Fourier expansion used to fit the eddy current is a robust method and the real time EFIT can be introduced to the plasma control system in the coming campaign. (magnetically confined plasma)

  13. Secondary reconstruction of maxillofacial trauma.

    Science.gov (United States)

    Castro-Núñez, Jaime; Van Sickels, Joseph E

    2017-08-01

    Craniomaxillofacial trauma is one of the most complex clinical conditions in contemporary maxillofacial surgery. Vital structures and possible functional and esthetic sequelae are important considerations following this type of trauma and intervention. Despite the best efforts of the primary surgery, there are a group of patients that will have poor outcomes requiring secondary reconstruction to restore form and function. The purpose of this study is to review current concepts on secondary reconstruction to the maxillofacial complex. The evaluation of a posttraumatic patient for a secondary reconstruction must include an assessment of the different subunits of the upper face, middle face, and lower face. Virtual surgical planning and surgical guides represent the most important innovations in secondary reconstruction over the past few years. Intraoperative navigational surgery/computed-assisted navigation is used in complex cases. Facial asymmetry can be corrected or significantly improved by segmentation of the computerized tomography dataset and mirroring of the unaffected side by means of virtual surgical planning. Navigational surgery/computed-assisted navigation allows for a more precise surgical correction when secondary reconstruction involves the replacement of extensive anatomical areas. The use of technology can result in custom-made replacements and prebent plates, which are more stable and resistant to fracture because of metal fatigue. Careful perioperative evaluation is the key to positive outcomes of secondary reconstruction after trauma. The advent of technological tools has played a capital role in helping the surgical team perform a given treatment plan in a more precise and predictable manner.

  14. Technical basis for dose reconstruction

    International Nuclear Information System (INIS)

    Anspaugh, L.R.

    1996-01-01

    The purpose of this paper is to consider two general topics: Technical considerations of why dose-reconstruction studies should or should not be performed and methods of dose reconstruction. The first topic is of general and growing interest as the number of dose-reconstruction studies increases, and one asks the question whether it is necessary to perform a dose reconstruction for virtually every site at which, for example, the Department of Energy (DOE) has operated a nuclear-related facility. And there is the broader question of how one might logically draw the line at performing or not performing dose-reconstruction (radiological and chemical) studies for virtually every industrial complex in the entire country. The second question is also of general interest. There is no single correct way to perform a dose-reconstruction study, and it is important not to follow blindly a single method to the point that cheaper, faster, more accurate, and more transparent methods might not be developed and applied. 90 refs., 4 tabs

  15. Technical basis for dose reconstruction

    International Nuclear Information System (INIS)

    Anspaugh, L.R.

    1996-01-01

    The purpose of this paper is to consider two general topics: technical considerations of why dose-reconstruction studies should or should not be performed and methods of dose reconstruction. The first topic is of general and growing interest as the number of dose-reconstruction studies increases, and one asks the question whether it is necessary to perform a dose reconstruction for virtually every site at which, for example, the Department of Energy (DOE) has operated a nuclear-related facility. And there is the broader question of how one might logically draw the line at performing or not performing dose-reconstruction (radiological and chemical) studies for virtually every industrial complex in the entire country. The second question is also of general interest. There is no single correct way to perform a dose-reconstruction study, and it is important not to follow blindly a single method to the point that cheaper, faster, more accurate, and more transparent methods might not be developed and applied

  16. Experiences in the localisation- and reconstruction performance of ultrasonic holography

    International Nuclear Information System (INIS)

    Mueller, W.; Schmitz, V.; Schaefer, G.; Langenberg, K.J.; Hoppstaedter, K.; Graeber, B.

    1983-01-01

    More than 600 holograms have been reconstructed in the past few years. Tests with angular testing heads were found to be inaccurate, due to the incongruity between the aperture on the one hand and the scanned surface - which is enlarged due to data digitalisation for the purpose of Fourier transformation. These errors could be avoided by considering the relative position of the aperture and the faulty region. It was also found that reconstruction with the exact Rayleigh-Sommerfeld formula is the only possible method of accurate fault detection. (orig./RW) [de

  17. Visualization and Analysis-Oriented Reconstruction of Material Interfaces

    Energy Technology Data Exchange (ETDEWEB)

    Childs, Henry R.

    2010-03-05

    Reconstructing boundaries along material interfaces from volume fractions is a difficult problem, especially because the under-resolved nature of the input data allows for many correct interpretations. Worse, algorithms widely accepted as appropriate for simulation are inappropriate for visualization. In this paper, we describe a new algorithm that is specifically intended for reconstructing material interfaces for visualization and analysis requirements. The algorithm performs well with respect to memory footprint and execution time, has desirable properties in various accuracy metrics, and also produces smooth surfaces with few artifacts, even when faced with more than two materials per cell.

  18. Computer-based image analysis in radiological diagnostics and image-guided therapy: 3D-Reconstruction, contrast medium dynamics, surface analysis, radiation therapy and multi-modal image fusion

    International Nuclear Information System (INIS)

    Beier, J.

    2001-01-01

    This book deals with substantial subjects of postprocessing and analysis of radiological image data, a particular emphasis was put on pulmonary themes. For a multitude of purposes the developed methods and procedures can directly be transferred to other non-pulmonary applications. The work presented here is structured in 14 chapters, each describing a selected complex of research. The chapter order reflects the sequence of the processing steps starting from artefact reduction, segmentation, visualization, analysis, therapy planning and image fusion up to multimedia archiving. In particular, this includes virtual endoscopy with three different scene viewers (Chap. 6), visualizations of the lung disease bronchiectasis (Chap. 7), surface structure analysis of pulmonary tumors (Chap. 8), quantification of contrast medium dynamics from temporal 2D and 3D image sequences (Chap. 9) as well as multimodality image fusion of arbitrary tomographical data using several visualization techniques (Chap. 12). Thus, the software systems presented cover the majority of image processing applications necessary in radiology and were entirely developed, implemented and validated in the clinical routine of a university medical school. (orig.) [de

  19. $xy$ Position Reconstruction in DarkSide-50

    Energy Technology Data Exchange (ETDEWEB)

    Brodsky, Jason Philip [Princeton Univ., NJ (United States)

    2015-01-01

    The DarkSide-50 experiment seeks to directly detect dark matter in a liquid argon time projection chamber. In this dissertation, I present an algorithm of my design that determines the position of particle interactions with the liquid argon. This position reconstruction algorithm will be used by DarkSide-50 to reject backgrounds, particularly backgrounds from radioactive elements on the detector surface. The position reconstruction algorithm functions by constructing light response functions (LRFs) that map locations in the detector to the expected distribution of signal in DarkSide-50's 38 photomultiplier tubes. Accurate LRFs cannot be produced by simulations of DarkSide-50's optics because such simulations are known to be awed. Instead, this algorithm constructs LRFs using an iterative process driven by data. Initial, awed LRFs are produced using simulated events but then used to produce new LRFs from data events. Multiple generations of LRFs are created from data with each generation driven to better satisfy a known feature of the detector: the dominant argon-39 background is uniformly distributed. I also discuss a method of discriminating against surface background as an alternative to the common approach of ducialization. This method considers the di erence in goodnessof- t between the best- t reconstructed position and the best- t position at the detector's surface. I conclude by presenting results on the performance and validity of this algorithm, including some discussion of reconstruction errors.

  20. Beard reconstruction: A surgical algorithm.

    Science.gov (United States)

    Ninkovic, M; Heidekrueger, P I; Ehrl, D; von Spiegel, F; Broer, P N

    2016-06-01

    Facial defects with loss of hair-bearing regions can be caused by trauma, infection, tumor excision, or burn injury. The presented analysis evaluates a series of different surgical approaches with a focus on male beard reconstruction, emphasizing the role of tissue expansion of regional and free flaps. Locoregional and free flap reconstructions were performed in 11 male patients with 14 facial defects affecting the hair-bearing bucco-mandibular or perioral region. In order to minimize donor-site morbidity and obtain large amounts of thin, pliable, hair-bearing tissue, pre-expansion was performed in five of 14 patients. Eight of 14 patients were treated with locoregional flap reconstructions and six with free flap reconstructions. Algorithms regarding pre- and intraoperative decision making are discussed and long-term (mean follow-up 1.5 years) results analyzed. Major complications, including tissue expander infection with the need for removal or exchange, partial or full flap loss, occurred in 0% (0/8) of patients with locoregional flaps and in 17% (1/6) of patients undergoing free flap reconstructions. Secondary refinement surgery was performed in 25% (2/8) of locoregional flaps and in 67% (4/6) of free flaps. Both locoregional and distant tissue transfers play a role in beard reconstruction, while pre-expansion remains an invaluable tool. Paying attention to the presented principles and considering the significance of aesthetic facial subunits, range of motion, aesthetics, and patient satisfaction were improved long term in all our patients while minimizing donor-site morbidity. Copyright © 2016 British Association of Plastic, Reconstructive and Aesthetic Surgeons. Published by Elsevier Ltd. All rights reserved.

  1. Oral and Oropharyngeal Reconstruction with a Free Flap.

    Science.gov (United States)

    Jeong, Woo Shik; Oh, Tae Suk

    2016-06-01

    Extensive surgical resection of the aerodigestive track can result in a large and complex defect of the oropharynx, which represents a significant reconstructive challenge for the plastic surgery. Development of microsurgical techniques has allowed for free flap reconstruction of oropharyngeal defects, with superior outcomes as well as decreases in postoperative complications. The reconstructive goals for oral and oropharyngeal defects are to restore the anatomy, to maintain continuity of the intraoral surface and oropharynx, to protect vital structures such as carotid arteries, to cover exposed portions of internal organs in preparation for adjuvant radiation, and to preserve complex functions of the oral cavity and oropharynx. Oral and oropharyngeal cancers should be treated with consideration of functional recovery. Multidisciplinary treatment strategies are necessary for maximizing disease control and preserving the natural form and function of the oropharynx.

  2. Regional absolute conductivity reconstruction using projected current density in MREIT

    International Nuclear Information System (INIS)

    Sajib, Saurav Z K; Kim, Hyung Joong; Woo, Eung Je; Kwon, Oh In

    2012-01-01

    Magnetic resonance electrical impedance tomography (MREIT) is a non-invasive technique for imaging the internal conductivity distribution in tissue within an MRI scanner, utilizing the magnetic flux density, which is introduced when a current is injected into the tissue from external electrodes. This magnetic flux alters the MRI signal, so that appropriate reconstruction can provide a map of the additional z-component of the magnetic field (B z ) as well as the internal current density distribution that created it. To extract the internal electrical properties of the subject, including the conductivity and/or the current density distribution, MREIT techniques use the relationship between the external injection current and the z-component of the magnetic flux density B = (B x , B y , B z ). The tissue studied typically contains defective regions, regions with a low MRI signal and/or low MRI signal-to-noise-ratio, due to the low density of nuclear magnetic resonance spins, short T 2 or T* 2 relaxation times, as well as regions with very low electrical conductivity, through which very little current traverses. These defective regions provide noisy B z data, which can severely degrade the overall reconstructed conductivity distribution. Injecting two independent currents through surface electrodes, this paper proposes a new direct method to reconstruct a regional absolute isotropic conductivity distribution in a region of interest (ROI) while avoiding the defective regions. First, the proposed method reconstructs the contrast of conductivity using the transversal J-substitution algorithm, which blocks the propagation of severe accumulated noise from the defective region to the ROI. Second, the proposed method reconstructs the regional projected current density using the relationships between the internal current density, which stems from a current injection on the surface, and the measured B z data. Combining the contrast conductivity distribution in the entire imaging

  3. Detection and reconstruction of freeform sweeps

    KAUST Repository

    Barton, Michael

    2014-05-01

    We study the difficult problem of deciding if parts of a freeform surface can be generated, or approximately generated, by the motion of a planar profile through space. While this task is basic for understanding the geometry of shapes as well as highly relevant for manufacturing and building construction, previous approaches were confined to special cases like kinematic surfaces or "moulding" surfaces. The general case remained unsolved so far. We approach this problem by a combination of local and global methods: curve analysis with regard to "movability", curve comparison by common substring search in curvature plots, an exhaustive search through all planar cuts enhanced by quick rejection procedures, the ordering of candidate profiles and finally, global optimization. The main applications of our method are digital reconstruction of CAD models exhibiting sweep patches, and aiding in manufacturing freeform surfaces by pointing out those parts which can be approximated by sweeps. © 2014 The Author(s) Computer Graphics Forum © 2014 The Eurographics Association and John Wiley & Sons Ltd. Published by John Wiley & Sons Ltd.

  4. [Trachea repair and reconstruction with new composite artificial trachea transplantation].

    Science.gov (United States)

    Liu, Wenliang; Xiao, Peng; Liang, Hengxing; An, Ran; Cheng, Gang; Yu, Fenglei

    2013-03-01

    To construct a new composite artificial trachea and to investigate the feasibility of trachea repair and reconstruction with the new composite artificial trachea transplantation in dogs. The basic skeleton of the new composite artificial trachea was polytetrafluoroethylene vascular prosthesis linked with titanium rings at both ends. Dualmesh was sutured on titanium rings. Sixteen dogs, weighing (14.9 +/- 2.0) kg, female or male, were selected. The 5 cm cervical trachea was resected to prepare the cervical trachea defect model. The trachea repair and reconstruction was performed with the new composite artificial trachea. Then fiberoptic bronchoscope examination, CT scan and three-dimensinal reconstruction were conducted at immediate, 1 month, and 6 months after operation. Gross observation and histological examination were conducted at 14 months to evaluate the repair and reconstruction efficacy. No dog died during operation of trachea reconstruction. One dog died of dyspnea at 37, 41, 55, 66, 140, and 274 days respectively because of anastomotic dehiscence and artificial trachea displacement; the other 10 dogs survived until 14 months. The fiberoptic bronchoscope examination, CT scan and three-dimensinal reconstruction showed that artificial tracheas were all in good location without twisting at immediate after operation; mild stenosis occurred and anastomoses had slight granulation in 6 dogs at 1 month; severe stenosis developed and anastomosis had more granulation in 1 dog and the other dogs were well alive without anastomotic stenosis at 6 months. At 14 months, gross observation revealed that outer surface of the artificial trachea were encapsulated by fibrous connective tissue in all of 10 dogs. Histological examination showed inflammatory infiltration and hyperplasia of fibrous tissue and no epithelium growth on the inner wall of the artificial trachea. The new composite artificial trachea can be used to repair and reconstruct defect of the trachea for a short

  5. Reconstructing a general inflationary action

    International Nuclear Information System (INIS)

    Bean, Rachel; Chung, Daniel J. H.; Geshnizjani, Ghazal

    2008-01-01

    If inflation is to be considered in an unbiased way, as possibly originating from one of a wide range of underlying theories, then observations need not be simply applied to reconstructing the inflaton potential V(φ) or a specific kinetic term, as in Dirac-Born-Infeld inflation, but rather to reconstruct the inflationary action in its entirety. We discuss the constraints that can be placed on a general single field action from measurements of the primordial scalar and tensor fluctuation power spectra and non-Gaussianities. The analytic form of the action that is consistent with data turns out to be surprisingly simple and easy to categorize. We also present the flow equation formalism for reconstructing a general inflationary Lagrangian L(X,φ), with X=(1/2)∂ μ φ∂ μ φ, in a general gauge, that reduces to canonical and DBI inflation in the specific gauge L X =c s -1 .

  6. Avoiding Complications with MPFL Reconstruction.

    Science.gov (United States)

    Smith, Marvin K; Werner, Brian C; Diduch, David R

    2018-05-12

    To discuss the potentially significant complications associated with medial patellofemoral ligament (MPFL) reconstruction. Additionally, to review the most current and relevant literature with an emphasis on avoiding these potential complications. Multiple cadaveric studies have characterized the anatomy of the MPFL and the related morphologic abnormalities that contribute to recurrent lateral patellar instability. Such abnormalities include patella alta, excessive tibial tubercle to trochlear grove (TT-TG) distance, trochlear dysplasia, and malalignment. Recent studies have evaluated the clinical outcomes associated with the treatment of concomitant pathology in combination with MPFL reconstruction, which is critical in avoiding recurrent instability and complications. Although there remains a lack of consensus regarding various critical aspects of MPFL reconstruction, certain concepts remain imperative. Our preferred methods and rationales for surgical techniques are described. These include appropriate work up, a combination of procedures to address abnormal morphology, anatomical femoral insertion, safe and secure patellar fixation, appropriate graft length fixation, and thoughtful knee flexion during fixation.

  7. CURRENT CONCEPTS IN ACL RECONSTRUCTION

    Directory of Open Access Journals (Sweden)

    Freddie H. Fu

    2008-09-01

    Full Text Available Current Concepts in ACL Reconstruction is a complete reference text composed of the most thorough collection of topics on the ACL and its surgical reconstruction compiled, with contributions from some of the world's experts and most experienced ACL surgeons. Various procedures mentioned throughout the text are also demonstrated in an accompanying video CD-ROM. PURPOSE Composing a single, comprehensive and complete information source on ACL including basic sciences, clinical issues, latest concepts and surgical techniques, from evaluation to outcome, from history to future, editors and contributors have targeted to keep the audience pace with the latest concepts and techniques for the evaluation and the treatment of ACL injuries. FEATURES The text is composed of 27 chapters in 6 sections. The first section is mostly about basic sciences, also history of the ACL, imaging, clinical approach to adolescent and pediatric patients are subjected. In the second section, Graft Choices and Arthroscopy Portals for ACL Reconstruction are mentioned. The third section is about the technique and the outcome of the single-bundle ACL reconstruction. The fourth chapter includes the techniques and outcome of the double-bundle ACL reconstruction. In the fifth chapter revision, navigation technology, rehabilitation and the evaluation of the outcome of ACL reconstruction is subjected. The sixth/the last chapter is about the future advances to reach: What We Have Learned and the Future of ACL Reconstruction. AUDIENCE Orthopedic residents, sports traumatology and knee surgery fellows, orthopedic surgeons, also scientists in basic sciences or clinicians who are studying or planning a research on ACL forms the audience group of this book. ASSESSMENT This is the latest, the most complete and comprehensive textbook of ACL reconstruction produced by the editorial work up of two pioneer and masters "Freddie H. Fu MD and Steven B. Cohen MD" with the contribution of world

  8. Recovery after abdominal wall reconstruction

    DEFF Research Database (Denmark)

    Jensen, Kristian Kiim

    2017-01-01

    Incisional hernia is a common long-term complication to abdominal surgery, occurring in more than 20% of all patients. Some of these hernias become giant and affect patients in several ways. This patient group often experiences pain, decreased perceived body image, and loss of physical function......, which results in a need for surgical repair of the giant hernia, known as abdominal wall reconstruction. In the current thesis, patients with a giant hernia were examined to achieve a better understanding of their physical and psychological function before and after abdominal wall reconstruction. Study...... was lacking. Study II was a case-control study of the effects of an enhanced recovery after surgery pathway for patients undergoing abdominal wall reconstruction for a giant hernia. Sixteen consecutive patients were included prospectively after the implementation of a new enhanced recovery after surgery...

  9. Biologically inspired EM image alignment and neural reconstruction.

    Science.gov (United States)

    Knowles-Barley, Seymour; Butcher, Nancy J; Meinertzhagen, Ian A; Armstrong, J Douglas

    2011-08-15

    Three-dimensional reconstruction of consecutive serial-section transmission electron microscopy (ssTEM) images of neural tissue currently requires many hours of manual tracing and annotation. Several computational techniques have already been applied to ssTEM images to facilitate 3D reconstruction and ease this burden. Here, we present an alternative computational approach for ssTEM image analysis. We have used biologically inspired receptive fields as a basis for a ridge detection algorithm to identify cell membranes, synaptic contacts and mitochondria. Detected line segments are used to improve alignment between consecutive images and we have joined small segments of membrane into cell surfaces using a dynamic programming algorithm similar to the Needleman-Wunsch and Smith-Waterman DNA sequence alignment procedures. A shortest path-based approach has been used to close edges and achieve image segmentation. Partial reconstructions were automatically generated and used as a basis for semi-automatic reconstruction of neural tissue. The accuracy of partial reconstructions was evaluated and 96% of membrane could be identified at the cost of 13% false positive detections. An open-source reference implementation is available in the Supplementary information. seymour.kb@ed.ac.uk; douglas.armstrong@ed.ac.uk Supplementary data are available at Bioinformatics online.

  10. Clinical applications of iterative reconstruction

    International Nuclear Information System (INIS)

    Eberl, S.

    1998-01-01

    Expectation maximisation (EM) reconstruction largely eliminates the hot and cold streaking artifacts characteristic of filtered-back projection (FBP) reconstruction around localised hot areas, such as the bladder. It also substantially reduces the problem of decreased inferior wall counts in MIBI myocardial perfusion studies due to ''streaking'' from high liver uptake. Non-uniform attenuation and scatter correction, resolution recovery, anatomical information, e.g. from MRI or CT tracer kinetic modelling, can all be built into the EM reconstruction imaging model. The properties of ordered subset EM (OSEM) have also been used to correct for known patient motion as part of the reconstruction process. These uses of EM are elaborated more fully in some of the other abstracts of this meeting. Currently we use OSEM routinely for: (i) studies where streaking is a problem, including all MIBI myocardial perfusion studies, to avoid hot liver inferior wall artifact, (ii) all whole body FDG PET, all lung V/Q SPECT (which have a short acquisition time) and all gated 201 TI myocardial perfusion studies due to improved noise characteristics of OSEM in these studies; (iii) studies with measured, non-uniform attenuation correction. With the accelerated OSEM algorithm, iterative reconstruction is practical for routine clinical applications and we have found OSEM to provide clearly superior reconstructions for the areas listed above and are investigating its application to other studies. In clinical use, we have not found OSEM to introduce artifacts which would not also occur with FBP, e.g. uncorrected patient motion will cause artifacts with both OSEM and FBP

  11. Characterisation of surface roughness for ultra-precision freeform surfaces

    International Nuclear Information System (INIS)

    Li Huifen; Cheung, C F; Lee, W B; To, S; Jiang, X Q

    2005-01-01

    Ultra-precision freeform surfaces are widely used in many advanced optics applications which demand for having surface roughness down to nanometer range. Although a lot of research work has been reported on the study of surface generation, reconstruction and surface characterization such as MOTIF and fractal analysis, most of them are focused on axial symmetric surfaces such as aspheric surfaces. Relative little research work has been found in the characterization of surface roughness in ultra-precision freeform surfaces. In this paper, a novel Robust Gaussian Filtering (RGF) method is proposed for the characterisation of surface roughness for ultra-precision freeform surfaces with known mathematic model or a cloud of discrete points. A series of computer simulation and measurement experiments were conducted to verify the capability of the proposed method. The experimental results were found to agree well with the theoretical results

  12. Merged Land and Ocean Surface Temperature, Version 3.5

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The historical Merged Land-Ocean Surface Temperature Analysis (MLOST) is derived from two independent analyses, an Extended Reconstructed Sea Surface Temperature...

  13. NOAA Global Surface Temperature Dataset, Version 4.0

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The NOAA Global Surface Temperature Dataset (NOAAGlobalTemp) is derived from two independent analyses: the Extended Reconstructed Sea Surface Temperature (ERSST)...

  14. Stress field reconstruction in an active mudslide

    Science.gov (United States)

    Baroň, Ivo; Kernstocková, Markéta; Melichar, Rostislav

    2017-07-01

    Meso-scale structures from gravitational slope deformation observed in landslides and deep-seated gravitational slope failures are very similar to those of endogenous ones. Therefore we applied palaeostress analysis of fault-slip data for reconstructing the stress field of an active mudslide in Pechgraben, Austria. This complex compound landslide has developed in clayey colluvium and shale and was activated after a certain period of dormancy in June 2013. During the active motion on June 12, 2013, 73 fault-slip traces at 9 locations were measured within the landslide body. The heterogeneous fault-slip data were processed in term of palaeostresses, the reconstructed palaeostress tensor being characterized by the orientations of the three principal stress axes and the stress ratio (which provides the shape of the stress ellipsoid). The results of the palaeostress analysis were compared to airborne laser scan digital terrain models that revealed dynamics and superficial displacements of the moving mass prior and after our survey. The results were generally in good agreement with the observed landslide displacement pattern and with the anticipated stress regime according to Mohr-Coulomb failure criteria and Anderson's theory. The compressional regime was mostly registered at the toe in areas, where a compressional stress field is expected during previous mass-movement stages, or at margins loaded by subsequent landslide bodies from above. On the other hand, extension regimes were identified at the head scarps of secondary slides, subsequently on bulged ridges at the toe and in the zone of horst-and-graben structures in the lower central part of the main landslide body, where the basal slip surface probably had locally convex character. Strike-slip regimes, as well as oblique normal or oblique reverse regimes were observed at the lateral margins of the landslide bodies. The directions of principal stresses could be used as markers of landslide movement directions

  15. Robust, Efficient Depth Reconstruction With Hierarchical Confidence-Based Matching.

    Science.gov (United States)

    Sun, Li; Chen, Ke; Song, Mingli; Tao, Dacheng; Chen, Gang; Chen, Chun

    2017-07-01

    In recent years, taking photos and capturing videos with mobile devices have become increasingly popular. Emerging applications based on the depth reconstruction technique have been developed, such as Google lens blur. However, depth reconstruction is difficult due to occlusions, non-diffuse surfaces, repetitive patterns, and textureless surfaces, and it has become more difficult due to the unstable image quality and uncontrolled scene condition in the mobile setting. In this paper, we present a novel hierarchical framework with multi-view confidence-based matching for robust, efficient depth reconstruction in uncontrolled scenes. Particularly, the proposed framework combines local cost aggregation with global cost optimization in a complementary manner that increases efficiency and accuracy. A depth map is efficiently obtained in a coarse-to-fine manner by using an image pyramid. Moreover, confidence maps are computed to robustly fuse multi-view matching cues, and to constrain the stereo matching on a finer scale. The proposed framework has been evaluated with challenging indoor and outdoor scenes, and has achieved robust and efficient depth reconstruction.

  16. The modulation and reconstruction of a BiO layer of cuprate Bi2212

    International Nuclear Information System (INIS)

    Fan Wei; Zeng, Z

    2011-01-01

    Studies based on ab initio density functional theory show that the modulated structures of BiO surfaces of cuprate Bi2212 superconductors are spontaneously formed and closely related to the reconstructions of BiO surfaces. The reconstructions of BiO layers occur both on the surface and in the bulk, accompanied with the formations of BiO-zigzag chains and Bi 2 O 2 quadrilaterals. The structural modulations of the BiO surface are along the b axis, perpendicular to the BiO-zigzag chains along the a axis. Our calculations provide a unified understanding of the formation of modulating structures in Bi2212. Another interesting result is that electronic structures of BiO surfaces are significantly influenced by the CuO 2 layer beneath because of the structural modulations and reconstructions.

  17. Hanford Environmental Dose Reconstruction Project monthly report

    International Nuclear Information System (INIS)

    McMakin, A.H., Cannon, S.D.; Finch, S.M.

    1992-09-01

    The objective of the Hanford Environmental Dose Reconstruction MDR) Project is to estimate the radiation doses that individuals and populations could have received from nuclear operations at Hanford since 1944. The TSP consists of experts in envirorunental pathways. epidemiology, surface-water transport, ground-water transport, statistics, demography, agriculture, meteorology, nuclear engineering. radiation dosimetry. and cultural anthropology. Included are appointed members representing the states of Oregon, Washington, and Idaho, a representative of Native American tribes, and an individual representing the public. The project is divided into the following technical tasks. These tasks correspond to the path radionuclides followed from release to impact on humans (dose estimates): Source Terms; Environmental Transport; Environmental Monitoring Data Demography, Food Consumption, and Agriculture; and Environmental Pathways and Dose Estimates

  18. Event Reconstruction Techniques in NOvA

    Science.gov (United States)

    Baird, M.; Bian, J.; Messier, M.; Niner, E.; Rocco, D.; Sachdev, K.

    2015-12-01

    The NOvA experiment is a long-baseline neutrino oscillation experiment utilizing the NuMI beam generated at Fermilab. The experiment will measure the oscillations within a muon neutrino beam in a 300 ton Near Detector located underground at Fermilab and a functionally-identical 14 kiloton Far Detector placed 810 km away. The detectors are liquid scintillator tracking calorimeters with a fine-grained cellular structure that provides a wealth of information for separating the different particle track and shower topologies. Each detector has its own challenges with the Near Detector seeing multiple overlapping neutrino interactions in each event and the Far Detector having a large background of cosmic rays due to being located on the surface. A series of pattern recognition techniques have been developed to go from event records, to spatially and temporally separating individual interactions, to vertexing and tracking, and particle identification. This combination of methods to achieve the full event reconstruction will be discussed.

  19. Ulysses S. Grant and Reconstruction.

    Science.gov (United States)

    Wilson, David L.

    1989-01-01

    Discusses the role played by Ulysses S. Grant during the four years of Reconstruction before he became President of the United States. Describes the dynamics of the relationship between Grant and Andrew Johnson. Points out that Grant's attitude of service to the laws created by Congress submerged his desire to create a new South. (KO)

  20. ASME method for particle reconstruction

    International Nuclear Information System (INIS)

    Ierusalimov, A.P.

    2009-01-01

    The method of approximate solution of motion equation (ASME) was used to reconstruct the parameters for charged particles. It provides a good precision for momentum, angular and space parameters of particles in coordinate detectors. The application of the method for CBM, HADES and MPD/NICA setups is discussed

  1. A Survey of Urban Reconstruction

    KAUST Repository

    Musialski, P.

    2013-05-10

    This paper provides a comprehensive overview of urban reconstruction. While there exists a considerable body of literature, this topic is still under active research. The work reviewed in this survey stems from the following three research communities: computer graphics, computer vision and photogrammetry and remote sensing. Our goal is to provide a survey that will help researchers to better position their own work in the context of existing solutions, and to help newcomers and practitioners in computer graphics to quickly gain an overview of this vast field. Further, we would like to bring the mentioned research communities to even more interdisciplinary work, since the reconstruction problem itself is by far not solved. This paper provides a comprehensive overview of urban reconstruction. While there exists a considerable body of literature, this topic is still under active research. The work reviewed in this survey stems from the following three research communities: computer graphics, computer vision and photogrammetry and remote sensing. Our goal is to provide a survey that will help researchers to better position their own work in the context of existing solutions, and to help newcomers and practitioners in computer graphics to quickly gain an overview of this vast field. Further, we would like to bring the mentioned research communities to even more interdisciplinary work, since the reconstruction problem itself is by far not solved. © 2013 The Eurographics Association and John Wiley & Sons Ltd.

  2. A Survey of Urban Reconstruction

    KAUST Repository

    Musialski, P.; Wonka, Peter; Aliaga, D. G.; Wimmer, M.; van Gool, L.; Purgathofer, W.

    2013-01-01

    This paper provides a comprehensive overview of urban reconstruction. While there exists a considerable body of literature, this topic is still under active research. The work reviewed in this survey stems from the following three research communities: computer graphics, computer vision and photogrammetry and remote sensing. Our goal is to provide a survey that will help researchers to better position their own work in the context of existing solutions, and to help newcomers and practitioners in computer graphics to quickly gain an overview of this vast field. Further, we would like to bring the mentioned research communities to even more interdisciplinary work, since the reconstruction problem itself is by far not solved. This paper provides a comprehensive overview of urban reconstruction. While there exists a considerable body of literature, this topic is still under active research. The work reviewed in this survey stems from the following three research communities: computer graphics, computer vision and photogrammetry and remote sensing. Our goal is to provide a survey that will help researchers to better position their own work in the context of existing solutions, and to help newcomers and practitioners in computer graphics to quickly gain an overview of this vast field. Further, we would like to bring the mentioned research communities to even more interdisciplinary work, since the reconstruction problem itself is by far not solved. © 2013 The Eurographics Association and John Wiley & Sons Ltd.

  3. Solutions for autonomy and reconstruction

    Energy Technology Data Exchange (ETDEWEB)

    Wilming, Wilhelm

    2011-07-01

    Stand-alone systems, whether solar home or pico solar systems, have reached a cost level at which they are an increasingly interesting option for wide-area development in grid-remote regions or for reconstruction where the previous grid infrastructure has been destroyed. (orig.)

  4. Poethical: Breaking Ground for Reconstruction

    Science.gov (United States)

    Krojer, Jo; Holge-Hazelton, Bibi

    2008-01-01

    Departing from a methodological experiment performed by the authors, this article reflects on and discusses issues of ethics and politics in poetic strategies of "representation". In relation to the experiment the article questions how to conceive the notion of connectedness between empirical time and the reconstruction of it in poststructuralist…

  5. Surface passivation for CdTe devices

    Energy Technology Data Exchange (ETDEWEB)

    Reese, Matthew O.; Perkins, Craig L.; Burst, James M.; Gessert, Timothy A.; Barnes, Teresa M.; Metzger, Wyatt K.

    2017-08-01

    In one embodiment, a method for surface passivation for CdTe devices is provided. The method includes adjusting a stoichiometry of a surface of a CdTe material layer such that the surface becomes at least one of stoichiometric or Cd-rich; and reconstructing a crystalline lattice at the surface of the CdTe material layer by annealing the adjusted surface.

  6. Surface and interface electronic structure: Three year activity report

    International Nuclear Information System (INIS)

    Kevan, S.D.

    1992-01-01

    The 3-year activity report covers surface structure and phonon anomalies (surface reconstruction on W(001) and Mo(001), adsorbate lateral ordering, surface Fermi contours and phonon anomalies on Pt(111) and Pd(001)), adsorbate vibrational damping, charge transfer in momentum space: W(011)-K, surface states and resonances (relativistic effects ampersand computations, surface resonances)

  7. Surface Water & Surface Drainage

    Data.gov (United States)

    Earth Data Analysis Center, University of New Mexico — This data set contains boundaries for all surface water and surface drainage for the state of New Mexico. It is in a vector digital data structure digitized from a...

  8. Stability indicators in network reconstruction.

    Directory of Open Access Journals (Sweden)

    Michele Filosi

    Full Text Available The number of available algorithms to infer a biological network from a dataset of high-throughput measurements is overwhelming and keeps growing. However, evaluating their performance is unfeasible unless a 'gold standard' is available to measure how close the reconstructed network is to the ground truth. One measure of this is the stability of these predictions to data resampling approaches. We introduce NetSI, a family of Network Stability Indicators, to assess quantitatively the stability of a reconstructed network in terms of inference variability due to data subsampling. In order to evaluate network stability, the main NetSI methods use a global/local network metric in combination with a resampling (bootstrap or cross-validation procedure. In addition, we provide two normalized variability scores over data resampling to measure edge weight stability and node degree stability, and then introduce a stability ranking for edges and nodes. A complete implementation of the NetSI indicators, including the Hamming-Ipsen-Mikhailov (HIM network distance adopted in this paper is available with the R package nettools. We demonstrate the use of the NetSI family by measuring network stability on four datasets against alternative network reconstruction methods. First, the effect of sample size on stability of inferred networks is studied in a gold standard framework on yeast-like data from the Gene Net Weaver simulator. We also consider the impact of varying modularity on a set of structurally different networks (50 nodes, from 2 to 10 modules, and then of complex feature covariance structure, showing the different behaviours of standard reconstruction methods based on Pearson correlation, Maximum Information Coefficient (MIC and False Discovery Rate (FDR strategy. Finally, we demonstrate a strong combined effect of different reconstruction methods and phenotype subgroups on a hepatocellular carcinoma miRNA microarray dataset (240 subjects, and we

  9. Genital reconstruction in exstrophy patients

    Directory of Open Access Journals (Sweden)

    R B Nerli

    2012-01-01

    Full Text Available Introduction: Surgery for bladder exstrophy has been evolving over the last four to five decades. Because survival has become almost universal, the focus has changed in the exstrophy-epispadias complex to improving quality of life. The most prevalent problem in the long-term function of exstrophy patients is the sexual activity of the adolescent and adult males. The penis in exstrophy patients appears short because of marked congenital deficiency of anterior corporal tissue. Many patients approach for genital reconstruction to improve cosmesis as well as to correct chordee. We report our series of male patients seeking genital reconstruction following exstrophy repair in the past. Materials and Methods: Fourteen adolescent/adult male patients attended urology services during the period January 2000-December 2009 seeking genital reconstruction following exstrophy repair in the past. Results: Three patients underwent epispadias repair, four patients had chordee correction with cosmetic excision of skin tags and seven patients underwent chordee correction with penile lengthening. All patients reported satisfaction in the answered questionnaire. Patients undergoing penile lengthening by partial corporal dissection achieved a mean increase in length of 1.614 ± 0.279 cm dorsally and 1.543 ± 0.230 cm ventrally. The satisfactory rate assessed by the Short Form-36 (SF-36 showed that irrespective of the different genital reconstructive procedures done, the patients were satisfied with cosmetic and functional outcome. Conclusions: Surgical procedures have transformed the management in these patients with bladder exstrophy. Bladders can be safely placed within the pelvis, with most patients achieving urinary continence and cosmetically acceptable external genitalia. Genital reconstruction in the form of correction of chordee, excision of ugly skin tags and lengthening of penis can be performed to give the patients a satisfactory cosmetic and functional

  10. Mandibular reconstruction in adults: a review.

    NARCIS (Netherlands)

    Goh, B.T.; Lee, S.; Tideman, H.; Stoelinga, P.J.W.

    2008-01-01

    Mandibular defects may result from trauma, inflammatory disease and benign or malignant tumours. Mastication, speech and facial aesthetics are often severely compromised without reconstruction. The goal of mandibular reconstruction is to restore facial form and function, implying repair of

  11. Discrete Wigner Function Reconstruction and Compressed Sensing

    OpenAIRE

    Zhang, Jia-Ning; Fang, Lei; Ge, Mo-Lin

    2011-01-01

    A new reconstruction method for Wigner function is reported for quantum tomography based on compressed sensing. By analogy with computed tomography, Wigner functions for some quantum states can be reconstructed with less measurements utilizing this compressed sensing based method.

  12. Multiview specular stereo reconstruction of large mirror surfaces

    KAUST Repository

    Balzer, Jonathan; Hö ler, Sebastian; Beyerer, Jü rgen

    2011-01-01

    In deflectometry, the shape of mirror objects is recovered from distorted images of a calibrated scene. While remarkably high accuracies are achievable, state-of-the-art methods suffer from two distinct weaknesses: First, for mainly constructive

  13. MRI and Stereo Vision Surface Reconstruction and Fusion

    NARCIS (Netherlands)

    El Chemaly, Trishia; Siepel, Françoise Jeanette; Rihana, Sandy; Groenhuis, Vincent; van der Heijden, Ferdinand; Stramigioli, Stefano

    2017-01-01

    Breast cancer, the most commonly diagnosed cancer in women worldwide, is mostly detected through a biopsy where tissue is extracted and chemically examined or pathologist assessed. Medical imaging plays a valuable role in targeting malignant tissue accurately and guiding the radiologist during

  14. Rotating optical geometry sensor for inner pipe-surface reconstruction

    Science.gov (United States)

    Ritter, Moritz; Frey, Christan W.

    2010-01-01

    The inspection of sewer or fresh water pipes is usually carried out by a remotely controlled inspection vehicle equipped with a high resolution camera and a lightning system. This operator-oriented approach based on offline analysis of the recorded images is highly subjective and prone to errors. Beside the subjective classification of pipe defects through the operator standard closed circuit television (CCTV) technology is not suitable for detecting geometrical deformations resulting from e.g. structural mechanical weakness of the pipe, corrosion of e.g. cast-iron material or sedimentations. At Fraunhofer Institute of Optronics, System Technologies and Image Exploitation (IOSB) in Karlsruhe, Germany, a new Rotating Optical Geometry Sensor (ROGS) for pipe inspection has been developed which is capable of measuring the inner pipe geometry very precisely over the whole pipe length. This paper describes the developed ROGS system and the online adaption strategy for choosing the optimal system parameters. These parameters are the rotation and traveling speed dependent from the pipe diameter. Furthermore, a practicable calibration methodology is presented which guarantees an identification of the several internal sensor parameters. ROGS has been integrated in two different systems: A rod based system for small fresh water pipes and a standard inspection vehicle based system for large sewer Pipes. These systems have been successfully applied to different pipe systems. With this measurement method the geometric information can be used efficiently for an objective repeatable quality evaluation. Results and experiences in the area of fresh water pipe inspection will be presented.

  15. Diamond surface: atomic and electronic structure

    International Nuclear Information System (INIS)

    Pate, B.B.

    1984-01-01

    Experimental studies of the diamond surface (with primary emphasis on the (111) surface) are presented. Aspects of the diamond surface which are addressed include (1) the electronic structure, (2) the atomic structure, and (3) the effect of termination of the lattice by foreign atoms. Limited studies of graphite are discussed for comparison with the diamond results. Experimental results from valence band and core level photoemission spectroscopy (PES), Auger electron spectroscopy (AES), low energy electron diffraction (LEED), and carbon 1s near edge x-ray absorption fine structure (NEXAFS) spectroscopy (both the total electron yield (TEY) and Auger electron yield (AEY) techniques) are used to study and characterize both the clean and hydrogenated surface. In addition, the interaction of hydrogen with the diamond surface is examined using results from vibrational high resolution low energy electron loss spectroscopy (in collaboration with Waclawski, Pierce, Swanson, and Celotta at the National Bureau of Standards) and photon stimulated ion desorption (PSID) yield at photon energies near the carbon k-edge (hv greater than or equal to 280 eV). Both EELS and PSID verify that the mechanically polished 1 x 1 surface is hydrogen terminated and also that the reconstructed surface is hydrogen free. The (111) 2 x 2/2 x 1 reconstructed surface is obtained from the hydrogenated (111) 1 x 1:H surface by annealing to approx. = 1000 0 C. We observe occupied intrinsic surface states and a surface chemical shift (0.95 +- 0.1 eV) to lower binding energy of the carbon 1s level on the hydrogen-free reconstructed surface. Atomic hydrogen is found to be reactive with the reconstructed surface, while molecular hydrogen is relatively inert. Exposure of the reconstructed surface to atomic hydrogen results in chemisorption of hydrogen and removal of the intrinsic surface state emission in and near the band gap region

  16. Application of 3D reconstruction system in diabetic foot ulcer injury assessment

    Science.gov (United States)

    Li, Jun; Jiang, Li; Li, Tianjian; Liang, Xiaoyao

    2018-04-01

    To deal with the considerable deviation of transparency tracing method and digital planimetry method used in current clinical diabetic foot ulcer injury assessment, this paper proposes a 3D reconstruction system which can be used to get foot model with good quality texture, then injury assessment is done by measuring the reconstructed model. The system uses the Intel RealSense SR300 depth camera which is based on infrared structured-light as input device, the required data from different view is collected by moving the camera around the scanned object. The geometry model is reconstructed by fusing the collected data, then the mesh is sub-divided to increase the number of mesh vertices and the color of each vertex is determined using a non-linear optimization, all colored vertices compose the surface texture of the reconstructed model. Experimental results indicate that the reconstructed model has millimeter-level geometric accuracy and texture with few artificial effect.

  17. Graft infections after surgical aortic reconstructions

    OpenAIRE

    Berger, P.

    2015-01-01

    Prosthetic vascular grafts are frequently used to reconstruct (part) of the aorta. Every surgical procedure caries a certain risk for infection and when a prosthetic aortic graft is implanted, this may lead to an aortic graft infection (AGI). Endovascular techniques have gradually replaced open surgical reconstructions as first line of treatment for aorto-iliac diseases. Nowadays, open reconstructions are primarily reserved for patients unsuitable for endovascular reconstructions or for redo ...

  18. Craniofacial Reconstruction Evaluation by Geodesic Network

    OpenAIRE

    Zhao, Junli; Liu, Cuiting; Wu, Zhongke; Duan, Fuqing; Wang, Kang; Jia, Taorui; Liu, Quansheng

    2014-01-01

    Craniofacial reconstruction is to estimate an individual’s face model from its skull. It has a widespread application in forensic medicine, archeology, medical cosmetic surgery, and so forth. However, little attention is paid to the evaluation of craniofacial reconstruction. This paper proposes an objective method to evaluate globally and locally the reconstructed craniofacial faces based on the geodesic network. Firstly, the geodesic networks of the reconstructed craniofacial face and the or...

  19. REGEN: Ancestral Genome Reconstruction for Bacteria

    OpenAIRE

    Yang, Kuan; Heath, Lenwood S.; Setubal, João C.

    2012-01-01

    Ancestral genome reconstruction can be understood as a phylogenetic study with more details than a traditional phylogenetic tree reconstruction. We present a new computational system called REGEN for ancestral bacterial genome reconstruction at both the gene and replicon levels. REGEN reconstructs gene content, contiguous gene runs, and replicon structure for each ancestral genome. Along each branch of the phylogenetic tree, REGEN infers evolutionary events, including gene creation and deleti...

  20. Top reconstruction and boosted top experimental overview

    CERN Document Server

    Skinnari, Louise

    2015-01-01

    An overview of techniques used to reconstruct resolved and boosted top quarks is presented. Techniques for resolved top quark reconstruction include kinematic likelihood fitters and pseudo- top reconstruction. Many tools and methods are available for the reconstruction of boosted top quarks, such as jet grooming techniques, jet substructure variables, and dedicated top taggers. Different techniques as used by ATLAS and CMS analyses are described and the performance of different variables and top taggers are shown.

  1. Vertex Reconstruction in ATLAS Run II

    CERN Document Server

    Zhang, Matt; The ATLAS collaboration

    2016-01-01

    Vertex reconstruction is the process of taking reconstructed tracks and using them to determine the locations of proton collisions. In this poster we present the performance of our current vertex reconstruction algorithm, and look at investigations into potential improvements from a new seed finding method.

  2. Workbench surface editor of brain cortical surface

    Science.gov (United States)

    Dow, Douglas E.; Nowinski, Wieslaw L.; Serra, Luis

    1996-04-01

    We have developed a 3D reach-in tool to manually reconstruct 3D cortical surface patches from 2D brain atlas images. The first application of our cortex editor is building 3D functional maps, specifically Brodmann's areas. This tool may also be useful in clinical practice to adjust incorrectly mapped atlas regions due to the deforming effect of lesions. The cortex editor allows a domain expert to control the correlation of control points across slices. Correct correlation has been difficult for 3D reconstruction algorithms because the atlas slices are far apart and because of the complex topology of the cortex which differs so much from slice to slice. Also, higher precision of the resulting surfaces is demanded since these define 3D brain atlas features upon which future stereotactic surgery may be based. The cortex editor described in this paper provides a tool suitable for a domain expert to use in defining the 3D surface of a Brodmann's area.

  3. Mandibular reconstruction using bone allografts

    International Nuclear Information System (INIS)

    Chang Joon Yim

    1999-01-01

    Further understanding of bone healing mechanisms, bone physiology and bone biology, transplantation immunology, and development of Tissue Banking procedures has enabled oral and maxillofacial surgeons to reconstruct even the most difficult bony defects successfully with the preserved allogeneic bone implant. Although it had been known that bone allografts were clinically effective, its application has not been widespread until the reports of Inclan (I 942), Hyatt and Butler (I 950), and Wilson (I 95 1). Tissue Banking provides the surgeon with a readily available, relatively inexpensive, and relatively safe selection of allogeneic bone for clinical use. Now autogenous bone and allogeneic bone implants present a wide variety of surgical options to surgeons, whether used separately or in combination. The surgeons are able to make judicious and fruitful choices, only with a thorough knowledge of the above-mentioned biological principles and skillful techniques. Many kinds of bone grafting techniques have been tried for reconstructing defective osseous tissues of the oral and maxillofacial region, though they have varying degrees of success. The osseous defects which require grafting include those of various size, shape, position, or amount. Unlike autogenous grafts, whose function is to provide osteogenic cells, allografts are purely passive, offering only a matrix for the inductive phase of bone healing. The condition of the recipient bed is of primary importance, because the host must produce all of the essential elements for the bone allograft to become incorporated. Depending on the processing methods of the allogeneic bone, the bone graft materials have different qualities, different healing potentials and different indications. Proper selection of grafts and surgical techniques requires an understanding of graft immunology and the mechanisms of graft healing. The surgeons should know about the biological principles to raise the clinical success rate

  4. Observation of Pt-{100}-p(2×2-O reconstruction by an environmental TEM

    Directory of Open Access Journals (Sweden)

    Hengbo Li

    2016-06-01

    Full Text Available The surface structure of noble metal nanoparticles usually plays a crucial role during the catalytic process in the fields of energy and environment. It has been studied extensively by surface analytic methods, such as scanning tunneling microscopy. However, it is still challenging to secure a direct observation of the structural evolution of surfaces of nanocatalysts in reaction (gas and heating conditions at the atomic scale. Here we report an in-situ observation of atomic reconstruction on Pt {100} surfaces exposed to oxygen in an environmental transmission electron microscope (TEM. Our high-resolution TEM images revealed that Pt-{100}-p(2×2-O reconstruction occurs during the reaction between oxygen atoms and {100} facets. A reconstruction model was proposed, and TEM images simulated according to this model with different defocus values match the experimental results well.

  5. Atmospheric muons reconstruction with Antares

    International Nuclear Information System (INIS)

    Melissas, M.

    2007-09-01

    The ANTARES collaboration is building a neutrino telescope in the Mediterranean Sea. This detector contains 900 photomultiplier tubes, dispatched on 12 lines, in order to detect Cerenkov light from muon induced by neutrino interactions in the the vicinity of the detector. Currently the first 5 lines have been deployed. A first task consists in studying the stability of the detector calibration, which is a necessary step to understand the detector response. Then we studied optical properties of water, for this we developed a reconstruction method dedicated to LED Beacon. The extracted parameters are compatible with earlier measurements. A quality criteria to reject badly reconstructed track has been developed based on the likelihood of the tracks fit versus point fit. This has been applied to real data and a preliminary analysis of atmospheric muons with a 5-lines detector is performed. (author)

  6. The Algebraic Reconstruction Technique (ART)

    International Nuclear Information System (INIS)

    Raparia, D.; Alessi, J.; Kponou, A.

    1997-01-01

    Projections of charged particle beam current density (profiles) are frequently used as a measure of beam position and size. In conventional practice only two projections, usually horizontal and vertical, are measured. This puts a severe limit on the detail of information that can be achieved. A third projection provides a significant improvement. The Algebraic Reconstruction Technique (ART) uses three or more projections to reconstruct 3-dimensional density profiles. At the 200 MeV H-linac, we have used this technique to measure beam density, and it has proved very helpful, especially in helping determine if there is any coupling present in x-y phase space. We will present examples of measurements of current densities using this technique

  7. Septal graft in laryngeal reconstruction

    International Nuclear Information System (INIS)

    Bahannan, Abdulrahman; Slavicek, A.; Taudy, M.; Chovanec, M.

    2006-01-01

    A 62-year-old woman presented with symptoms of dyspnea. Ultrasonography and computed tomography examinations revealed mass extending from the cricoid cartilage to the left lobe of thyroid gland and thyroid cartilage. Cytology revealed possibility of cartilaginous origin, which was proven to be chondrosarcoma (Grade 1) from the biopsy specimen obtained during panendosopy. She underwent one stage radical resection and immediate reconstruction of laryngeal skeleton defect by mucocartilaginous graft from the nasal septum. Her postoperative course was optimal with preservation of the laryngeal functions. Twenty-eight months postoperatively, she had to undergo total laryngectomy as a salvage procedure for the advanced local recurrence. We report on the relatively easy technique for functional reconstruction of the large laryngeal defect with the employment cartilage graft from the nasal septum. (author)

  8. Phylogenetic reconstruction methods: an overview.

    Science.gov (United States)

    De Bruyn, Alexandre; Martin, Darren P; Lefeuvre, Pierre

    2014-01-01

    Initially designed to infer evolutionary relationships based on morphological and physiological characters, phylogenetic reconstruction methods have greatly benefited from recent developments in molecular biology and sequencing technologies with a number of powerful methods having been developed specifically to infer phylogenies from macromolecular data. This chapter, while presenting an overview of basic concepts and methods used in phylogenetic reconstruction, is primarily intended as a simplified step-by-step guide to the construction of phylogenetic trees from nucleotide sequences using fairly up-to-date maximum likelihood methods implemented in freely available computer programs. While the analysis of chloroplast sequences from various Vanilla species is used as an illustrative example, the techniques covered here are relevant to the comparative analysis of homologous sequences datasets sampled from any group of organisms.

  9. Direct reconstruction of dark energy.

    Science.gov (United States)

    Clarkson, Chris; Zunckel, Caroline

    2010-05-28

    An important issue in cosmology is reconstructing the effective dark energy equation of state directly from observations. With so few physically motivated models, future dark energy studies cannot only be based on constraining a dark energy parameter space. We present a new nonparametric method which can accurately reconstruct a wide variety of dark energy behavior with no prior assumptions about it. It is simple, quick and relatively accurate, and involves no expensive explorations of parameter space. The technique uses principal component analysis and a combination of information criteria to identify real features in the data, and tailors the fitting functions to pick up trends and smooth over noise. We find that we can constrain a large variety of w(z) models to within 10%-20% at redshifts z≲1 using just SNAP-quality data.

  10. Structure Assisted Compressed Sensing Reconstruction of Undersampled AFM Images

    DEFF Research Database (Denmark)

    Oxvig, Christian Schou; Arildsen, Thomas; Larsen, Torben

    2017-01-01

    reconstruction algorithms that enables the use of our proposed structure model in the reconstruction process. Through a large set of reconstructions, the general reconstruction capability improvement achievable using our structured model is shown both quantitatively and qualitatively. Specifically, our...

  11. Towards easy and reliable AFM tip shape determination using blind tip reconstruction

    International Nuclear Information System (INIS)

    Flater, Erin E.; Zacharakis-Jutz, George E.; Dumba, Braulio G.; White, Isaac A.; Clifford, Charles A.

    2014-01-01

    Quantitative determination of the geometry of an atomic force microscope (AFM) probe tip is critical for robust measurements of the nanoscale properties of surfaces, including accurate measurement of sample features and quantification of tribological characteristics. Blind tip reconstruction, which determines tip shape from an AFM image scan without knowledge of tip or sample shape, was established most notably by Villarrubia [J. Res. Natl. Inst. Stand. Tech. 102 (1997)] and has been further developed since that time. Nevertheless, the implementation of blind tip reconstruction for the general user to produce reliable and consistent estimates of tip shape has been hindered due to ambiguity about how to choose the key input parameters, such as tip matrix size and threshold value, which strongly impact the results of the tip reconstruction. These key parameters are investigated here via Villarrubia's blind tip reconstruction algorithms in which we have added the capability for users to systematically vary the key tip reconstruction parameters, evaluate the set of possible tip reconstructions, and determine the optimal tip reconstruction for a given sample. We demonstrate the capabilities of these algorithms through analysis of a set of simulated AFM images and provide practical guidelines for users of the blind tip reconstruction method. We present a reliable method to choose the threshold parameter corresponding to an optimal reconstructed tip shape for a given image. Specifically, we show that the trend in how the reconstructed tip shape varies with threshold number is so regular that the optimal, or Goldilocks, threshold value corresponds with the peak in the derivative of the RMS difference with respect to the zero threshold curve vs. threshold number. - Highlights: • Blind tip reconstruction algorithms have been implemented and augmented to determine the optimal input parameters. • We demonstrate the capabilities of the algorithms using a simulated AFM

  12. Electro-optical system for the high speed reconstruction of computed tomography images

    International Nuclear Information System (INIS)

    Tresp, V.

    1989-01-01

    An electro-optical system for the high-speed reconstruction of computed tomography (CT) images has been built and studied. The system is capable of reconstructing high-contrast and high-resolution images at video rate (30 images per second), which is more than two orders of magnitude faster than the reconstruction rate achieved by special purpose digital computers used in commercial CT systems. The filtered back-projection algorithm which was implemented in the reconstruction system requires the filtering of all projections with a prescribed filter function. A space-integrating acousto-optical convolver, a surface acoustic wave filter and a digital finite-impulse response filter were used for this purpose and their performances were compared. The second part of the reconstruction, the back projection of the filtered projections, is computationally very expensive. An optical back projector has been built which maps the filtered projections onto the two-dimensional image space using an anamorphic lens system and a prism image rotator. The reconstructed image is viewed by a video camera, routed through a real-time image-enhancement system, and displayed on a TV monitor. The system reconstructs parallel-beam projection data, and in a modified version, is also capable of reconstructing fan-beam projection data. This extension is important since the latter are the kind of projection data actually acquired in high-speed X-ray CT scanners. The reconstruction system was tested by reconstructing precomputed projection data of phantom images. These were stored in a special purpose projection memory and transmitted to the reconstruction system as an electronic signal. In this way, a projection measurement system that acquires projections sequentially was simulated

  13. Mastectomy Skin Necrosis After Breast Reconstruction: A Comparative Analysis Between Autologous Reconstruction and Implant-Based Reconstruction.

    Science.gov (United States)

    Sue, Gloria R; Lee, Gordon K

    2018-05-01

    Mastectomy skin necrosis is a significant problem after breast reconstruction. We sought to perform a comparative analysis on this complication between patients undergoing autologous breast reconstruction and patients undergoing 2-stage expander implant breast reconstruction. A retrospective review was performed on consecutive patients undergoing autologous breast reconstruction or 2-stage expander implant breast reconstruction by the senior author from 2006 through 2015. Patient demographic factors including age, body mass index, history of diabetes, history of smoking, and history of radiation to the breast were collected. Our primary outcome measure was mastectomy skin necrosis. Fisher exact test was used for statistical analysis between the 2 patient cohorts. The treatment patterns of mastectomy skin necrosis were then analyzed. We identified 204 patients who underwent autologous breast reconstruction and 293 patients who underwent 2-stage expander implant breast reconstruction. Patients undergoing autologous breast reconstruction were older, heavier, more likely to have diabetes, and more likely to have had prior radiation to the breast compared with patients undergoing implant-based reconstruction. The incidence of mastectomy skin necrosis was 30.4% of patients in the autologous group compared with only 10.6% of patients in the tissue expander group (P care in the autologous group, only 3.2% were treated with local wound care in the tissue expander group (P skin necrosis is significantly more likely to occur after autologous breast reconstruction compared with 2-stage expander implant-based breast reconstruction. Patients with autologous reconstructions are more readily treated with local wound care compared with patients with tissue expanders, who tended to require operative treatment of this complication. Patients considering breast reconstruction should be counseled appropriately regarding the differences in incidence and management of mastectomy skin

  14. Reconstruction of Attosecond Pulse Trains

    Science.gov (United States)

    Mairesse, Y.; Agostini, P.; Breger, P.; Carre, B.; Merdji, A.; Monchicourt, P.; Salieres, P.; Varju, K.; Gustafsson, E.; Johnsson, P.; Mauritsson, J.; Remetter, T.; L'Huillier, A.; Frasinski, L. J.

    2006-11-01

    We show that it is possible to completely reconstruct the intensity profile of the attosecond bursts emitted as a superposition of high harmonics from a series of RABBIT measurements carried out at different infrared intensities. The electric field can be recovered from a measurement of the central harmonic chirp. Timing, chirp and variations of the carrier-to-envelope phase of the attosecond bursts are accessible to the proposed method.

  15. Hanford Environmental Dose Reconstruction Project

    International Nuclear Information System (INIS)

    Cannon, S.D.; Finch, S.M.

    1992-10-01

    The objective of the Hanford Environmental Dose Reconstruction (HEDR) Project is to estimate the radiation doses that individuals and populations could have received from nuclear operations at Hanford since 1944. The independent Technical Steering Panel (TSP) provides technical direction. The project is divided into the following technical tasks. These tasks correspond to the path radionuclides followed from release to impact on humans (dose estimates):Source Terms, Environmental Transport, Environmental Monitoring Data, Demography, Food Consumption, and Agriculture, and Environmental Pathways and Dose Estimates

  16. Computed laminography and reconstruction algorithm

    International Nuclear Information System (INIS)

    Que Jiemin; Cao Daquan; Zhao Wei; Tang Xiao

    2012-01-01

    Computed laminography (CL) is an alternative to computed tomography if large objects are to be inspected with high resolution. This is especially true for planar objects. In this paper, we set up a new scanning geometry for CL, and study the algebraic reconstruction technique (ART) for CL imaging. We compare the results of ART with variant weighted functions by computer simulation with a digital phantom. It proves that ART algorithm is a good choice for the CL system. (authors)

  17. Colour reconstruction of underwater images

    OpenAIRE

    Hoth, Julian; Kowalczyk, Wojciech

    2017-01-01

    Objects look very different in the underwater environment compared to their appearance in sunlight. Images with correct colouring simplify the detection of underwater objects and may allow the use of visual SLAM algorithms developed for land-based robots underwater. Hence, image processing is required. Current algorithms focus on the colour reconstruction of scenery at diving depth where different colours can still be distinguished. At greater depth this is not the case. In this study it is i...

  18. A Reduction of the Graph Reconstruction Conjecture

    Directory of Open Access Journals (Sweden)

    Monikandan S.

    2014-08-01

    Full Text Available A graph is said to be reconstructible if it is determined up to isomor- phism from the collection of all its one-vertex deleted unlabeled subgraphs. Reconstruction Conjecture (RC asserts that all graphs on at least three vertices are reconstructible. In this paper, we prove that interval-regular graphs and some new classes of graphs are reconstructible and show that RC is true if and only if all non-geodetic and non-interval-regular blocks G with diam(G = 2 or diam(Ḡ = diam(G = 3 are reconstructible

  19. BES-II fast data reconstruction

    International Nuclear Information System (INIS)

    Rong Gang; Zhang Jiawen; Guo Yiqing; Zhang Shaoqiang; Zhao Dixin

    2002-01-01

    The BES-II fast data reconstruction is reported. Based on PC FARM and/or a 'Distributed Clustered Linux PC System', BES-II fast data reconstruction system is set up. With this system the BES-II data can be fully reconstructed in about 20 minutes after data collection. It takes only 12 minutes to fully reconstruct 30000 events, collected with BES-II detector at BEPC Collider, with a P III-800 PC. The detector performance can be examined based on fully reconstructed data in about 20 minutes after data taking in the BES-II experiment

  20. A variational study on BRDF reconstruction in a structured light scanner

    DEFF Research Database (Denmark)

    Nielsen, Jannik Boll; Stets, Jonathan Dyssel; Lyngby, Rasmus Ahrenkiel

    2017-01-01

    Time-efficient acquisition of reflectance behavior together with surface geometry is a challenging problem. In this study, we investigate the impact of system parameter uncertainties when incorporating a data-driven BRDF reconstruction approach into the standard pipeline of a structured light...... setup. Results show that while uncertainties in vertex positions and normals have a high impact on the quality of reconstructed BRDFs, object geometry