Subcellular trace element distribution in Geosiphon pyriforme
International Nuclear Information System (INIS)
Maetz, Mischa; Schuessler, Arthur; Wallianos, Alexandros; Traxel, Kurt
1999-01-01
Geosiphon pyriforme is a unique endosymbiotic consortium consisting of a soil dwelling fungus and the cyanobacterium Nostoc punctiforme. At present this symbiosis becomes very interesting because of its phylogenetic relationship to the arbuscular mycorrhizal (AM) fungi. Geosiphon pyriforme could be an important model system for these obligate symbiotic fungi, which supply 80-90% of all land plant species with nutrients, in particular phosphorous and trace elements. Combined PIXE and STIM analyses of the various compartments of Geosiphon give hints for the matter exchange between the symbiotic partners and their environment and the kind of nutrient storage and acquisition, in particular related to nitrogen fixation and metabolism. To determine the quality of our PIXE results we analysed several geological and biological standards over a time period of three years. This led to an overall precision of about 6% and an accuracy of 5-10% for nearly all detectable elements. In combination with the correction model for the occurring mass loss during the analyses this holds true even for biological targets
Subcellular trace element distribution in Geosiphon pyriforme
Energy Technology Data Exchange (ETDEWEB)
Maetz, Mischa E-mail: mischa.maetz@mpi-hd.mpg.de; Schuessler, Arthur; Wallianos, Alexandros; Traxel, Kurt
1999-04-02
Geosiphon pyriforme is a unique endosymbiotic consortium consisting of a soil dwelling fungus and the cyanobacterium Nostoc punctiforme. At present this symbiosis becomes very interesting because of its phylogenetic relationship to the arbuscular mycorrhizal (AM) fungi. Geosiphon pyriforme could be an important model system for these obligate symbiotic fungi, which supply 80-90% of all land plant species with nutrients, in particular phosphorous and trace elements. Combined PIXE and STIM analyses of the various compartments of Geosiphon give hints for the matter exchange between the symbiotic partners and their environment and the kind of nutrient storage and acquisition, in particular related to nitrogen fixation and metabolism. To determine the quality of our PIXE results we analysed several geological and biological standards over a time period of three years. This led to an overall precision of about 6% and an accuracy of 5-10% for nearly all detectable elements. In combination with the correction model for the occurring mass loss during the analyses this holds true even for biological targets.
Energy Technology Data Exchange (ETDEWEB)
Wester, P O
1964-12-15
Subcellular fractions of beef heart tissue are investigated, by means of neutron activation analysis, with respect to their concentration of 17 different elements. A recently developed ion-exchange technique combined with gamma spectrometry is used. The homogeneity of the subcellular fractions is examined electron microscopically. The following elements are determined: As, Ba, Br, Cas Co, Cs, Cu, Fe, Hg, La, Mo, P, Rb, Se, Sm, W and Zn. The determination of Ag, Au, Cd, Ce, Cr, Sb and Sc is omitted, in view of contamination. Reproducible and characteristic patterns of distribution are obtained for all elements studied.
International Nuclear Information System (INIS)
Wester, P.O.
1964-12-01
Subcellular fractions of beef heart tissue are investigated, by means of neutron activation analysis, with respect to their concentration of 17 different elements. A recently developed ion-exchange technique combined with gamma spectrometry is used. The homogeneity of the subcellular fractions is examined electron microscopically. The following elements are determined: As, Ba, Br, Cas Co, Cs, Cu, Fe, Hg, La, Mo, P, Rb, Se, Sm, W and Zn. The determination of Ag, Au, Cd, Ce, Cr, Sb and Sc is omitted, in view of contamination. Reproducible and characteristic patterns of distribution are obtained for all elements studied
Activation analysis study on subcellular distribution of trace elements in human brain tumor
International Nuclear Information System (INIS)
Zheng Jian; Zhuan Guisun; Wang Yongji; Dong Mo; Zhang Fulin
1992-01-01
The concentrations of up to 11 elements in subcellular fractions of human brain (normal and malignant tumor) have been determined by a combination of gradient centrifugation and INAA methods. Samples of human brain were homogenized in a glass homogenizer tube, the homogenate was separated into nuclei, mitochondrial, myelin, synaptosome fractions, and these fractions were then analyzed using the INAA method. The discussions of elemental subcelleular distributions in human brain malignant tumor are presented in this paper. (author) 11 refs.; 2 figs.; 4 tabs
He, Mei; Ke, Cai-Huan; Wang, Wen-Xiong
2010-03-24
In current human health risk assessment, the maximum acceptable concentrations of contaminants in food are mostly based on the total concentrations. However, the total concentration of contaminants may not always reflect the available amount. Bioaccessibility determination is thus required to improve the risk assessment of contaminants. This study used an in vitro digestion model to assess the bioaccessibility of several trace elements (As, Cd, Cu, Fe, Se, and Zn) in the muscles of two farmed marine fish species (seabass Lateolabrax japonicus and red seabream Pagrosomus major ) of different body sizes. The total concentrations and subcellular distributions of these trace elements in fish muscles were also determined. Bioaccessibility of these trace elements was generally high (>45%), and the lowest bioaccessibility was observed for Fe. Cooking processes, including boiling, steaming, frying, and grilling, generally decreased the bioaccessibility of these trace elements, especially for Cu and Zn. The influences of frying and grilling were greater than those of boiling and steaming. The relationship of bioaccessibility and total concentration varied with the elements. A positive correlation was found for As and Cu and a negative correlation for Fe, whereas no correlation was found for Cd, Se, and Zn. A significant positive relationship was demonstrated between the bioaccessibility and the elemental partitioning in the heat stable protein fraction and in the trophically available fraction, and a negative correlation was observed between the bioaccessibility and the elemental partitioning in metal-rich granule fraction. Subcellular distribution may thus affect the bioaccessibility of metals and should be considered in the risk assessment for seafood safety.
Chandra, Subhash
2008-12-01
Secondary ion mass spectrometry (SIMS) based imaging techniques capable of subcellular resolution characterization of elements and molecules are becoming valuable tools in many areas of biology and medicine. Due to high vacuum requirements of SIMS, the live cells cannot be analyzed directly in the instrument. The sample preparation, therefore, plays a critical role in preserving the native chemical composition for SIMS analysis. This work focuses on the evaluation of frozen-hydrated and frozen freeze-dried sample preparations for SIMS studies of cultured cells with a CAMECA IMS-3f dynamic SIMS ion microscope instrument capable of producing SIMS images with a spatial resolution of 500 nm. The sandwich freeze-fracture method was used for fracturing the cells. The complimentary fracture planes in the plasma membrane were characterized by field-emission secondary electron microscopy (FESEM) in the frozen-hydrated state. The cells fractured at the dorsal surface were used for SIMS analysis. The frozen-hydrated SIMS analysis of individual cells under dynamic primary ion beam (O 2+) revealed local secondary ion signal enhancements correlated with the water image signals of 19(H 3O) +. A preferential removal of water from the frozen cell matrix in the Z-axis was also observed. These complications render the frozen-hydrated sample type less desirable for subcellular dynamic SIMS studies. The freeze-drying of frozen-hydrated cells, either inside the instrument or externally in a freeze-drier, allowed SIMS imaging of subcellular chemical composition. Morphological evaluations of fractured freeze-dried cells with SEM and confocal laser scanning microscopy (CLSM) revealed well-preserved mitochondria, Golgi apparatus, and stress fibers. SIMS analysis of fractured freeze-dried cells revealed well-preserved chemical composition of even the most highly diffusible ions like K + and Na + in physiologically relevant concentrations. The high K-low Na signature in individual cells
International Nuclear Information System (INIS)
Chandra, Subhash
2008-01-01
Secondary ion mass spectrometry (SIMS) based imaging techniques capable of subcellular resolution characterization of elements and molecules are becoming valuable tools in many areas of biology and medicine. Due to high vacuum requirements of SIMS, the live cells cannot be analyzed directly in the instrument. The sample preparation, therefore, plays a critical role in preserving the native chemical composition for SIMS analysis. This work focuses on the evaluation of frozen-hydrated and frozen freeze-dried sample preparations for SIMS studies of cultured cells with a CAMECA IMS-3f dynamic SIMS ion microscope instrument capable of producing SIMS images with a spatial resolution of 500 nm. The sandwich freeze-fracture method was used for fracturing the cells. The complimentary fracture planes in the plasma membrane were characterized by field-emission secondary electron microscopy (FESEM) in the frozen-hydrated state. The cells fractured at the dorsal surface were used for SIMS analysis. The frozen-hydrated SIMS analysis of individual cells under dynamic primary ion beam (O 2 + ) revealed local secondary ion signal enhancements correlated with the water image signals of 19 (H 3 O) + . A preferential removal of water from the frozen cell matrix in the Z-axis was also observed. These complications render the frozen-hydrated sample type less desirable for subcellular dynamic SIMS studies. The freeze-drying of frozen-hydrated cells, either inside the instrument or externally in a freeze-drier, allowed SIMS imaging of subcellular chemical composition. Morphological evaluations of fractured freeze-dried cells with SEM and confocal laser scanning microscopy (CLSM) revealed well-preserved mitochondria, Golgi apparatus, and stress fibers. SIMS analysis of fractured freeze-dried cells revealed well-preserved chemical composition of even the most highly diffusible ions like K + and Na + in physiologically relevant concentrations. The high K-low Na signature in individual cells
Saini, Harsh; Raicar, Gaurav; Dehzangi, Abdollah; Lal, Sunil; Sharma, Alok
2015-12-07
Protein subcellular localization is an important topic in proteomics since it is related to a protein׳s overall function, helps in the understanding of metabolic pathways, and in drug design and discovery. In this paper, a basic approximation technique from natural language processing called the linear interpolation smoothing model is applied for predicting protein subcellular localizations. The proposed approach extracts features from syntactical information in protein sequences to build probabilistic profiles using dependency models, which are used in linear interpolation to determine how likely is a sequence to belong to a particular subcellular location. This technique builds a statistical model based on maximum likelihood. It is able to deal effectively with high dimensionality that hinders other traditional classifiers such as Support Vector Machines or k-Nearest Neighbours without sacrificing performance. This approach has been evaluated by predicting subcellular localizations of Gram positive and Gram negative bacterial proteins. Copyright © 2015 Elsevier Ltd. All rights reserved.
International Nuclear Information System (INIS)
Seebaugh, David R.; Wallace, William G.
2009-01-01
Chronic exposure to polluted field conditions can impact metal bioavailability in prey and may influence metal transfer to predators. The present study investigated the assimilation of Cd, Hg and organic carbon by grass shrimp Palaemonetes pugio, collected along an impact gradient within the New York/New Jersey Harbor Estuary. Adult shrimp were collected from five Staten Island, New York study sites, fed 109 Cd- or 203 Hg-labeled amphipods or 14 C-labeled meals and analyzed for assimilation efficiencies (AE). Subsamples of amphipods and shrimp were subjected to subcellular fractionation to isolate metal associated with a compartment presumed to contain trophically available metal (TAM) (metal associated with heat-stable proteins [HSP - e.g., metallothionein-like proteins], heat-denatured proteins [HDP - e.g., enzymes] and organelles [ORG]). TAM- 109 Cd% and TAM- 203 Hg% in radiolabeled amphipods were ∼64% and ∼73%, respectively. Gradients in AE- 109 Cd% (∼54% to ∼75%) and AE- 203 Hg% (∼61% to ∼78%) were observed for grass shrimp, with the highest values exhibited by shrimp collected from sites within the heavily polluted Arthur Kill complex. Population differences in AE- 14 C% were not observed. Assimilated 109 Cd% partitioned to the TAM compartment in grass shrimp varied between ∼67% and ∼75%. 109 Cd bound to HSP in shrimp varied between ∼15% and ∼47%, while 109 Cd associated with metal-sensitive HDP was ∼17% to ∼44%. Percentages of assimilated 109 Cd bound to ORG were constant at ∼10%. Assimilated 203 Hg% associated with TAM in grass shrimp did not exhibit significant variation. Percentages of assimilated 203 Hg bound to HDP (∼47%) and ORG (∼11%) did not vary among populations and partitioning of 203 Hg to HSP was not observed. Using a simplified biokinetic model of metal accumulation from the diet, it is estimated that site-specific variability in Cd AE by shrimp and tissue Cd burdens in field-collected prey (polychaetes Nereis spp
International Nuclear Information System (INIS)
Cantino, M.E.; Schackmann, R.W.; Johnson, D.E.
1983-01-01
Energy-dispersive x-ray microanalysis was used to analyze changes in the subcellular distributions of Na, Mg, P, S, Cl, K, and Ca associated with the acrosome reaction of sea urchin sperm. Within 5 sec after induction of the acrosome reaction, nuclear Na and mitochondrial Ca increased and nuclear and mitochondrial K decreased. Uptake of mitochondrial P was detected after several minutes, and increases in nuclear Mg were detected only after 5-10 min of incubation following induction of the reaction. The results suggest that sudden permeability changes in the sperm plasma membrane are associated with the acrosome reaction, but that complete breakdown of membrane and cell function does not occur for several minutes
Directory of Open Access Journals (Sweden)
Thomas eNägele
2013-12-01
Full Text Available During the last decade genome sequencing has experienced a rapid technological development resulting in numerous sequencing projects and applications in life science. In plant molecular biology, the availability of sequence data on whole genomes has enabled the reconstruction of metabolic networks. Enzymatic reactions are predicted by the sequence information. Pathways arise due to the participation of chemical compounds as substrates and products in these reactions. Although several of these comprehensive networks have been reconstructed for the genetic model plant Arabidopsis thaliana, the integration of experimental data is still challenging. Particularly the analysis of subcellular organization of plant cells limits the understanding of regulatory instances in these metabolic networks in vivo. In this study, we develop an approach for the functional integration of experimental high-throughput data into such large-scale networks. We present a subcellular metabolic network model comprising 524 metabolic intermediates and 548 metabolic interactions derived from a total of 2769 reactions. We demonstrate how to link the metabolite covariance matrix of different Arabidopsis thaliana accessions with the subcellular metabolic network model for the inverse calculation of the biochemical Jacobian, finally resulting in the calculation of a matrix which satisfies a Lyaponov equation involving a covariance matrix. In this way, differential strategies of metabolite compartmentation and involved reactions were identified in the accessions when exposed to low temperature.
International Nuclear Information System (INIS)
Tonks, M.R.; Williamson, R.; Masson, R.
2015-01-01
The Finite Element Method (FEM) is a numerical technique for finding approximate solutions to boundary value problems. While FEM is commonly used to solve solid mechanics equations, it can be applied to a large range of BVPs from many different fields. FEM has been used for reactor fuels modelling for many years. It is most often used for fuel performance modelling at the pellet and pin scale, however, it has also been used to investigate properties of the fuel material, such as thermal conductivity and fission gas release. Recently, the United Stated Department Nuclear Energy Advanced Modelling and Simulation Program has begun using FEM as the basis of the MOOSE-BISON-MARMOT Project that is developing a multi-dimensional, multi-physics fuel performance capability that is massively parallel and will use multi-scale material models to provide a truly predictive modelling capability. (authors)
Directory of Open Access Journals (Sweden)
Giovanni Dalmasso
amplifying, cell-to-cell variability of mitochondrial morphology and energetic stress states. Overall, our modeling approach integrates biochemical and imaging knowledge, and presents a novel open-modeling approach to investigate how spatial and temporal mitochondrial dynamics contribute to functional homeostasis, and how subcellular organelle heterogeneity contributes to the emergence of cell heterogeneity.
Energy Technology Data Exchange (ETDEWEB)
Morris, J; Johnson, S
2007-12-03
The Distinct Element Method (also frequently referred to as the Discrete Element Method) (DEM) is a Lagrangian numerical technique where the computational domain consists of discrete solid elements which interact via compliant contacts. This can be contrasted with Finite Element Methods where the computational domain is assumed to represent a continuum (although many modern implementations of the FEM can accommodate some Distinct Element capabilities). Often the terms Discrete Element Method and Distinct Element Method are used interchangeably in the literature, although Cundall and Hart (1992) suggested that Discrete Element Methods should be a more inclusive term covering Distinct Element Methods, Displacement Discontinuity Analysis and Modal Methods. In this work, DEM specifically refers to the Distinct Element Method, where the discrete elements interact via compliant contacts, in contrast with Displacement Discontinuity Analysis where the contacts are rigid and all compliance is taken up by the adjacent intact material.
Directory of Open Access Journals (Sweden)
Jarrod S Johnson
2011-05-01
Full Text Available Barriers to infection act at multiple levels to prevent viruses, bacteria, and parasites from commandeering host cells for their own purposes. An intriguing hypothesis is that if a cell experiences stress, such as that elicited by inflammation, endoplasmic reticulum (ER expansion, or misfolded proteins, then subcellular barriers will be less effective at preventing viral infection. Here we have used models of cystic fibrosis (CF to test whether subcellular stress increases susceptibility to adeno-associated virus (AAV infection. In human airway epithelium cultured at an air/liquid interface, physiological conditions of subcellular stress and ER expansion were mimicked using supernatant from mucopurulent material derived from CF lungs. Using this inflammatory stimulus to recapitulate stress found in diseased airways, we demonstrated that AAV infection was significantly enhanced. Since over 90% of CF cases are associated with a misfolded variant of Cystic Fibrosis Transmembrane Conductance Regulator (ΔF508-CFTR, we then explored whether the presence of misfolded proteins could independently increase susceptibility to AAV infection. In these models, AAV was an order of magnitude more efficient at transducing cells expressing ΔF508-CFTR than in cells expressing wild-type CFTR. Rescue of misfolded ΔF508-CFTR under low temperature conditions restored viral transduction efficiency to that demonstrated in controls, suggesting effects related to protein misfolding were responsible for increasing susceptibility to infection. By testing other CFTR mutants, G551D, D572N, and 1410X, we have shown this phenomenon is common to other misfolded proteins and not related to loss of CFTR activity. The presence of misfolded proteins did not affect cell surface attachment of virus or influence expression levels from promoter transgene cassettes in plasmid transfection studies, indicating exploitation occurs at the level of virion trafficking or processing. Thus
International Nuclear Information System (INIS)
Bozoki, E.
1987-01-01
There is burgeoning interest in modeling-based accelerator control. With more and more stringent requirements on the performance, the importance of knowing, controlling, predicting the behavior of the accelerator system is growing. Modeling means two things: (1) the development of programs and data which predict the outcome of a measurement, and (2) devising and performing measurements to find the machine physics parameter and their behavior under different conditions. These two sides should be tied together in an iterative process. With knowledge gained on the real system, the model will be modified, calibrated, and fine-tuned. The model of a system consists of data and the modeling program. The Modeling Based Control Programs (MBC) should in the on-line mode control, optimize, and correct the machine. In the off-line mode, the MBC is used to simulate the machine as well as explore and study its behavior and responses under a wide variety of circumstances. 15 refs., 3 figs
Energy Technology Data Exchange (ETDEWEB)
Kunito, Takashi; Nakamura, Shinji; Ikemoto, Tokutaka; Anan, Yasumi; Kubota, Reiji; Tanabe, Shinsuke; Rosas, Fernando C.W.; Fillmann, Gilberto; Readman, James W
2004-10-01
Concentrations of trace elements (V, Cr, Mn, Fe, Co, Cu, Zn, Ga, As, Se, Rb, Sr, Mo, Ag, Cd, Sb, Cs, Ba, T-Hg, Org-Hg, Tl and Pb) were determined in liver samples of estuarine dolphin (Sotalia guianensis; n=20), Franciscana dolphin (Pontoporia blainvillei; n=23), Atlantic spotted dolphin (Stenella frontalis; n=2), common dolphin (Delphinus capensis; n=1) and striped dolphin (Stenella coeruleoalba; n=1) incidentally caught along the coast of Sao Paulo State and Parana State, Brazil, from 1997 to 1999. The hepatic concentrations of trace elements in the Brazilian cetaceans were comparable to the data available in literature on marine mammals from Northern Hemisphere. Concentrations of V, Se, Mo, Cd, T-Hg and Org-Hg increased with increasing age in liver of both estuarine and Franciscana dolphins. Very high concentrations of Cu (range, 262-1970 {mu}g/g dry wt.) and Zn (range, 242-369 {mu}g/g dry wt.) were observed in liver of sucklings of estuarine dolphin. Hepatic concentrations of V, Se, T-Hg, Org-Hg and Pb were significantly higher in estuarine dolphin, whereas Franciscana dolphin showed higher concentrations of Mn, Co, As and Rb. Ratio of Org-Hg to T-Hg in liver was significantly higher in Franciscana dolphin than estuarine dolphin, suggesting that demethylation ability of methyl Hg might be lower in liver of Franciscana than estuarine dolphins. High hepatic concentrations of Ag were found in some specimens of Franciscana dolphin (maximum, 20 {mu}g/g dry wt.), and 17% of Franciscana showed higher concentrations of Ag than Hg. These samples with high Ag concentration also exhibited elevated hepatic Se concentration, implying that Ag might be detoxified by Se in the liver. Higher correlation coefficient between (Hg + 0.5 Ag) and Se than between Hg and Se and the large distribution of Ag in non-soluble fraction in nuclear and mitochondrial fraction of the liver also suggests that Ag might be detoxified by Se via formation of Ag{sub 2}Se in the liver of Franciscana
International Nuclear Information System (INIS)
Kunito, Takashi; Nakamura, Shinji; Ikemoto, Tokutaka; Anan, Yasumi; Kubota, Reiji; Tanabe, Shinsuke; Rosas, Fernando C.W.; Fillmann, Gilberto; Readman, James W.
2004-01-01
Concentrations of trace elements (V, Cr, Mn, Fe, Co, Cu, Zn, Ga, As, Se, Rb, Sr, Mo, Ag, Cd, Sb, Cs, Ba, T-Hg, Org-Hg, Tl and Pb) were determined in liver samples of estuarine dolphin (Sotalia guianensis; n=20), Franciscana dolphin (Pontoporia blainvillei; n=23), Atlantic spotted dolphin (Stenella frontalis; n=2), common dolphin (Delphinus capensis; n=1) and striped dolphin (Stenella coeruleoalba; n=1) incidentally caught along the coast of Sao Paulo State and Parana State, Brazil, from 1997 to 1999. The hepatic concentrations of trace elements in the Brazilian cetaceans were comparable to the data available in literature on marine mammals from Northern Hemisphere. Concentrations of V, Se, Mo, Cd, T-Hg and Org-Hg increased with increasing age in liver of both estuarine and Franciscana dolphins. Very high concentrations of Cu (range, 262-1970 μg/g dry wt.) and Zn (range, 242-369 μg/g dry wt.) were observed in liver of sucklings of estuarine dolphin. Hepatic concentrations of V, Se, T-Hg, Org-Hg and Pb were significantly higher in estuarine dolphin, whereas Franciscana dolphin showed higher concentrations of Mn, Co, As and Rb. Ratio of Org-Hg to T-Hg in liver was significantly higher in Franciscana dolphin than estuarine dolphin, suggesting that demethylation ability of methyl Hg might be lower in liver of Franciscana than estuarine dolphins. High hepatic concentrations of Ag were found in some specimens of Franciscana dolphin (maximum, 20 μg/g dry wt.), and 17% of Franciscana showed higher concentrations of Ag than Hg. These samples with high Ag concentration also exhibited elevated hepatic Se concentration, implying that Ag might be detoxified by Se in the liver. Higher correlation coefficient between (Hg + 0.5 Ag) and Se than between Hg and Se and the large distribution of Ag in non-soluble fraction in nuclear and mitochondrial fraction of the liver also suggests that Ag might be detoxified by Se via formation of Ag 2 Se in the liver of Franciscana dolphin
Physical model of Nernst element
International Nuclear Information System (INIS)
Nakamura, Hiroaki; Ikeda, Kazuaki; Yamaguchi, Satarou
1998-08-01
Generation of electric power by the Nernst effect is a new application of a semiconductor. A key point of this proposal is to find materials with a high thermomagnetic figure-of-merit, which are called Nernst elements. In order to find candidates of the Nernst element, a physical model to describe its transport phenomena is needed. As the first model, we began with a parabolic two-band model in classical statistics. According to this model, we selected InSb as candidates of the Nernst element and measured their transport coefficients in magnetic fields up to 4 Tesla within a temperature region from 270 K to 330 K. In this region, we calculated transport coefficients numerically by our physical model. For InSb, experimental data are coincident with theoretical values in strong magnetic field. (author)
Gomes Fernandes, Maria; He, Nannan; Wang, Fang; Van Iperen, Liesbeth; Eguizabal, Cristina; Matorras, Roberto; Roelen, Bernard A J; Chuva De Sousa Lopes, Susana M
2018-02-01
What is the dynamics of expression of P-element induced wimpy testis-like (PIWIL) proteins in the germline during human fetal development and spermatogenesis? PIWIL1, PIWIL2, PIWIL3 and PIWIL4 were expressed in a sex-specific fashion in human germ cells (GC) during development and adulthood. PIWILs showed a mutually exclusive pattern of subcellular localization. PIWILs were present in the intermitochondrial cement and a single large granule in meiotic GC and their expression was different from that observed in mice, highlighting species-differences. In mice, PIWIL proteins play prominent roles in male infertility. PIWIL mouse mutants show either post-meiotic arrest at the round spermatid stage (PIWIL1) or arrest at the zygotene-pachytene stage of meiosis I (PIWIL2 and PIWIL4) in males, while females remain fertile. Recent studies have reported a robust piRNA pool in human fetal ovary. This is a qualitative analysis of PIWILs expression in paraffin-embedded fetal human male (N = 8), female gonads (N = 6) and adult testes (N = 5), and bioinformatics analysis of online available single-cell transcriptomics data of human fetal germ cells (n = 242). Human fetal gonads from elective abortion without medical indication and adult testes biopsies were donated for research with informed consent. Samples were fixed, paraffin-embedded and analyzed by immunofluorescence to study the temporal and cellular localization of PIWIL1, PIWIL2, PIWIL3 and PIWIL4. PIWIL1, PIWIL2 and PIWIL4 showed a mutually exclusive pattern of subcellular localization, particularly in female oocytes. To our surprise, PIWIL1 immunostaining revealed the presence of a single dense paranuclear body, resembling the chromatoid body of haploid spermatocytes, in meiotic oocytes. Moreover, in contrast to mice, PIWIL4, but not PIWIL2, localized to the intermitochondrial cement. PIWIL3 was not expressed in GC during development. The upregulation of PIWIL transcripts correlated with the transcription of markers
Directory of Open Access Journals (Sweden)
Gregory R Johnson
2015-12-01
Full Text Available Characterizing the spatial distribution of proteins directly from microscopy images is a difficult problem with numerous applications in cell biology (e.g. identifying motor-related proteins and clinical research (e.g. identification of cancer biomarkers. Here we describe the design of a system that provides automated analysis of punctate protein patterns in microscope images, including quantification of their relationships to microtubules. We constructed the system using confocal immunofluorescence microscopy images from the Human Protein Atlas project for 11 punctate proteins in three cultured cell lines. These proteins have previously been characterized as being primarily located in punctate structures, but their images had all been annotated by visual examination as being simply "vesicular". We were able to show that these patterns could be distinguished from each other with high accuracy, and we were able to assign to one of these subclasses hundreds of proteins whose subcellular localization had not previously been well defined. In addition to providing these novel annotations, we built a generative approach to modeling of punctate distributions that captures the essential characteristics of the distinct patterns. Such models are expected to be valuable for representing and summarizing each pattern and for constructing systems biology simulations of cell behaviors.
Finite element coiled cochlea model
Isailovic, Velibor; Nikolic, Milica; Milosevic, Zarko; Saveljic, Igor; Nikolic, Dalibor; Radovic, Milos; Filipović, Nenad
2015-12-01
Cochlea is important part of the hearing system, and thanks to special structure converts external sound waves into neural impulses which go to the brain. Shape of the cochlea is like snail, so geometry of the cochlea model is complex. The simplified cochlea coiled model was developed using finite element method inside SIFEM FP7 project. Software application is created on the way that user can prescribe set of the parameters for spiral cochlea, as well as material properties and boundary conditions to the model. Several mathematical models were tested. The acoustic wave equation for describing fluid in the cochlea chambers - scala vestibuli and scala timpani, and Newtonian dynamics for describing vibrations of the basilar membrane are used. The mechanical behavior of the coiled cochlea was analyzed and the third chamber, scala media, was not modeled because it does not have a significant impact on the mechanical vibrations of the basilar membrane. The obtained results are in good agreement with experimental measurements. Future work is needed for more realistic geometry model. Coiled model of the cochlea was created and results are compared with initial simplified coiled model of the cochlea.
Structural modeling techniques by finite element method
International Nuclear Information System (INIS)
Kang, Yeong Jin; Kim, Geung Hwan; Ju, Gwan Jeong
1991-01-01
This book includes introduction table of contents chapter 1 finite element idealization introduction summary of the finite element method equilibrium and compatibility in the finite element solution degrees of freedom symmetry and anti symmetry modeling guidelines local analysis example references chapter 2 static analysis structural geometry finite element models analysis procedure modeling guidelines references chapter 3 dynamic analysis models for dynamic analysis dynamic analysis procedures modeling guidelines and modeling guidelines.
Polymerization and oscillation stuttering in a filamentous model of the subcellular Min oscillation
Rutenberg, Andrew; Sengupta, Supratim; Sain, Anirban; Derr, Julien
2011-03-01
We present a computational model of the E. coli Min oscillation that involves polymerization of MinD filaments followed by depolymerization stimulated by filament-end zones of MinE. Our stochastic model is fully three-dimensional, and tracks the diffusion and interactions of every MinD and MinE molecule. We recover self-organized Min oscillations. We investigate the experimental phenomenon of oscillation stuttering, which we relate to the disruption of MinE tip-binding at the filament scale.
Wasnik, Vaibhav; Wingreen, Ned; Mukhopadhyay, Ranjan
2012-02-01
Recent experiments suggest that in the bacterium, B. subtilis, the cue for the localization of small sporulation protein, SpoVM, that plays a central role in spore coat formation, is curvature of the bacterial plasma membrane. This curvature-dependent localization is puzzling given the orders of magnitude difference in lengthscale of an individual protein and radius of curvature of the membrane. Here we develop a minimal model to study the relationship between curvature-dependent membrane absorption of SpoVM and clustering of membrane-associated SpoVM and compare our results with experiments.
Leonardo, T; Farhi, E; Boisson, A-M; Vial, J; Cloetens, P; Bohic, S; Rivasseau, C
2014-02-01
The newly discovered unicellular micro-alga Coccomyxa actinabiotis proves to be highly radio-tolerant and strongly concentrates radionuclides, as well as large amounts of toxic metals. This study helps in the understanding of the mechanisms involved in the accumulation and detoxification of silver and cobalt. Elemental distribution inside Coccomyxa actinabiotis cells was determined using synchrotron nano X-ray fluorescence spectroscopy at the ID22 nano fluorescence imaging beamline of the European Synchrotron Radiation Facility. The high resolution and high sensitivity of this technique enabled the assessment of elemental associations and exclusions in subcellular micro-algae compartments. A quantitative treatment of the scans was implemented to yield absolute concentrations of each endogenous and exogenous element with a spatial resolution of 100 nm and compared to the macroscopic content in cobalt and silver determined using inductively coupled plasma-mass spectrometry. The nano X-ray fluorescence imaging was complemented by transmission electron microscopy coupled to X-ray microanalysis (TEM-EDS), yielding differential silver distribution in the cell wall, cytosol, nucleus, chloroplast and mitochondria with unique resolution. The analysis of endogenous elements in control cells revealed that iron had a unique distribution; zinc, potassium, manganese, molybdenum, and phosphate had their maxima co-localized in the same area; and sulfur, copper and chlorine were almost homogeneously distributed among the whole cell. The subcellular distribution and quantification of cobalt and silver in micro-alga, assessed after controlled exposure to various concentrations, revealed that exogenous metals were mainly sequestered inside the cell rather than on mucilage or the cell wall, with preferential compartmentalization. Cobalt was homogeneously distributed outside of the chloroplast. Silver was localized in the cytosol at low concentration and in the whole cell excluding the
Kuthan, Hartmut
2003-03-07
The location of distinct sites is mandatory for many cellular processes. In the subcompartments of the cell nucleus, only very small numbers of diffusing macromolecules and specific target sites of some types may be present. In this case, we are faced with the Brownian movement of individual macromolecules and their "random search" for single/few specific target sites, rather than bulk-averaged diffusion and multiple sites. In this article, I consider the location of a distant central target site, e.g. a globular protein, by individual macromolecules executing unbiased (i.e. drift-free) random walks in a spherical compartment. For this walk-and-capture model, the closed-form analytic solution of the first passage time probability density function (p.d.f.) has been obtained as well as the first and second moment. In the limit of a large ratio of the radii of the spherical diffusion space and central target, well-known relations for the variance and the first two moments for the exponential p.d.f. were found to hold with high accuracy. These calculations reinforce earlier numerical results and Monte Carlo simulations. A major implication derivable from the model is that non-directed random movement is an effective means for locating single sites in submicron-sized compartments, even when the diffusion coefficients are comparatively small and the diffusing species are present in one copy only. These theoretical conclusions are underscored numerically for effective diffusion constants ranging from 0.5 to 10.0 microm(2) s(-1), which have been reported for a couple of nuclear proteins in their physiological environment. Spherical compartments of submicron size are, for example, the Cajal bodies (size: 0.1-1.0 microm), which are present in 1-5 copies in the cell nucleus. Within a small Cajal body of radius 0.1 microm a single diffusing protein molecule (with D=0.5 microm(2) s(-1)) would encounter a medium-sized protein of radius 2.5 nm within 1 s with a probability near
FINITE ELEMENT MODEL FOR PREDICTING RESIDUAL ...
African Journals Online (AJOL)
FINITE ELEMENT MODEL FOR PREDICTING RESIDUAL STRESSES IN ... the transverse residual stress in the x-direction (σx) had a maximum value of 375MPa ... the finite element method are in fair agreement with the experimental results.
Zhou, Hang; Yang, Yang; Shen, Hong-Bin
2017-03-15
Protein subcellular localization prediction has been an important research topic in computational biology over the last decade. Various automatic methods have been proposed to predict locations for large scale protein datasets, where statistical machine learning algorithms are widely used for model construction. A key step in these predictors is encoding the amino acid sequences into feature vectors. Many studies have shown that features extracted from biological domains, such as gene ontology and functional domains, can be very useful for improving the prediction accuracy. However, domain knowledge usually results in redundant features and high-dimensional feature spaces, which may degenerate the performance of machine learning models. In this paper, we propose a new amino acid sequence-based human protein subcellular location prediction approach Hum-mPLoc 3.0, which covers 12 human subcellular localizations. The sequences are represented by multi-view complementary features, i.e. context vocabulary annotation-based gene ontology (GO) terms, peptide-based functional domains, and residue-based statistical features. To systematically reflect the structural hierarchy of the domain knowledge bases, we propose a novel feature representation protocol denoted as HCM (Hidden Correlation Modeling), which will create more compact and discriminative feature vectors by modeling the hidden correlations between annotation terms. Experimental results on four benchmark datasets show that HCM improves prediction accuracy by 5-11% and F 1 by 8-19% compared with conventional GO-based methods. A large-scale application of Hum-mPLoc 3.0 on the whole human proteome reveals proteins co-localization preferences in the cell. www.csbio.sjtu.edu.cn/bioinf/Hum-mPLoc3/. hbshen@sjtu.edu.cn. Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com
Verification of Orthogrid Finite Element Modeling Techniques
Steeve, B. E.
1996-01-01
The stress analysis of orthogrid structures, specifically with I-beam sections, is regularly performed using finite elements. Various modeling techniques are often used to simplify the modeling process but still adequately capture the actual hardware behavior. The accuracy of such 'Oshort cutso' is sometimes in question. This report compares three modeling techniques to actual test results from a loaded orthogrid panel. The finite element models include a beam, shell, and mixed beam and shell element model. Results show that the shell element model performs the best, but that the simpler beam and beam and shell element models provide reasonable to conservative results for a stress analysis. When deflection and stiffness is critical, it is important to capture the effect of the orthogrid nodes in the model.
Critically Important Object Security System Element Model
Directory of Open Access Journals (Sweden)
I. V. Khomyackov
2012-03-01
Full Text Available A stochastic model of critically important object security system element has been developed. The model includes mathematical description of the security system element properties and external influences. The state evolution of the security system element is described by the semi-Markov process with finite states number, the semi-Markov matrix and the initial semi-Markov process states probabilities distribution. External influences are set with the intensity of the Poisson thread.
Finite element modeling of piezoelectric elements with complex electrode configuration
International Nuclear Information System (INIS)
Paradies, R; Schläpfer, B
2009-01-01
It is well known that the material properties of piezoelectric materials strongly depend on the state of polarization of the individual element. While an unpolarized material exhibits mechanically isotropic material properties in the absence of global piezoelectric capabilities, the piezoelectric material properties become transversally isotropic with respect to the polarization direction after polarization. Therefore, for evaluating piezoelectric elements the material properties, including the coupling between the mechanical and the electromechanical behavior, should be addressed correctly. This is of special importance for the micromechanical description of piezoelectric elements with interdigitated electrodes (IDEs). The best known representatives of this group are active fiber composites (AFCs), macro fiber composites (MFCs) and the radial field diaphragm (RFD), respectively. While the material properties are available for a piezoelectric wafer with a homogeneous polarization perpendicular to its plane as postulated in the so-called uniform field model (UFM), the same information is missing for piezoelectric elements with more complex electrode configurations like the above-mentioned ones with IDEs. This is due to the inhomogeneous field distribution which does not automatically allow for the correct assignment of the material, i.e. orientation and property. A variation of the material orientation as well as the material properties can be accomplished by including the polarization process of the piezoelectric transducer in the finite element (FE) simulation prior to the actual load case to be investigated. A corresponding procedure is presented which automatically assigns the piezoelectric material properties, e.g. elasticity matrix, permittivity, and charge vector, for finite element models (FEMs) describing piezoelectric transducers according to the electric field distribution (field orientation and strength) in the structure. A corresponding code has been
Nonlinear finite element modeling of corrugated board
A. C. Gilchrist; J. C. Suhling; T. J. Urbanik
1999-01-01
In this research, an investigation on the mechanical behavior of corrugated board has been performed using finite element analysis. Numerical finite element models for corrugated board geometries have been created and executed. Both geometric (large deformation) and material nonlinearities were included in the models. The analyses were performed using the commercial...
Wood, Scott T; Dean, Brian C; Dean, Delphine
2013-04-01
This paper presents a novel computer vision algorithm to analyze 3D stacks of confocal images of fluorescently stained single cells. The goal of the algorithm is to create representative in silico model structures that can be imported into finite element analysis software for mechanical characterization. Segmentation of cell and nucleus boundaries is accomplished via standard thresholding methods. Using novel linear programming methods, a representative actin stress fiber network is generated by computing a linear superposition of fibers having minimum discrepancy compared with an experimental 3D confocal image. Qualitative validation is performed through analysis of seven 3D confocal image stacks of adherent vascular smooth muscle cells (VSMCs) grown in 2D culture. The presented method is able to automatically generate 3D geometries of the cell's boundary, nucleus, and representative F-actin network based on standard cell microscopy data. These geometries can be used for direct importation and implementation in structural finite element models for analysis of the mechanics of a single cell to potentially speed discoveries in the fields of regenerative medicine, mechanobiology, and drug discovery. Copyright © 2012 Elsevier B.V. All rights reserved.
Non-linear finite element modeling
DEFF Research Database (Denmark)
Mikkelsen, Lars Pilgaard
The note is written for courses in "Non-linear finite element method". The note has been used by the author teaching non-linear finite element modeling at Civil Engineering at Aalborg University, Computational Mechanics at Aalborg University Esbjerg, Structural Engineering at the University...
Gomes Fernandes, Maria; He, Nannan; Wang, Fang; Van Iperen, Liesbeth; Eguizabal, Cristina; Matorras, Roberto; Roelen, Bernard A J; Chuva de Sousa Lopes, Susana M
2018-01-01
STUDY QUESTION: What is the dynamics of expression of P-element induced wimpy testis-like (PIWIL) proteins in the germline during human fetal development and spermatogenesis? SUMMARY ANSWER: PIWIL1, PIWIL2, PIWIL3 and PIWIL4 were expressed in a sex-specific fashion in human germ cells (GC) during
Business model elements impacting cloud computing adoption
DEFF Research Database (Denmark)
Bogataj, Kristina; Pucihar, Andreja; Sudzina, Frantisek
The paper presents a proposed research framework for identification of business model elements impacting Cloud Computing Adoption. We provide a definition of main Cloud Computing characteristics, discuss previous findings on factors impacting Cloud Computing Adoption, and investigate technology a...
Modeling beams with elements in phase space
International Nuclear Information System (INIS)
Nelson, E.M.
1998-01-01
Conventional particle codes represent beams as a collection of macroparticles. An alternative is to represent the beam as a collection of current carrying elements in phase space. While such a representation has limitations, it may be less noisy than a macroparticle model, and it may provide insights about the transport of space charge dominated beams which would otherwise be difficult to gain from macroparticle simulations. The phase space element model of a beam is described, and progress toward an implementation and difficulties with this implementation are discussed. A simulation of an axisymmetric beam using 1d elements in phase space is demonstrated
Directory of Open Access Journals (Sweden)
Tam Michael WC
2010-03-01
Full Text Available Abstract Background Puf proteins have important roles in controlling gene expression at the post-transcriptional level by promoting RNA decay and repressing translation. The Pumilio homology domain (PUM-HD is a conserved region within Puf proteins that binds to RNA with sequence specificity. Although Puf proteins have been well characterized in animal and fungal systems, little is known about the structural and functional characteristics of Puf-like proteins in plants. Results The Arabidopsis and rice genomes code for 26 and 19 Puf-like proteins, respectively, each possessing eight or fewer Puf repeats in their PUM-HD. Key amino acids in the PUM-HD of several of these proteins are conserved with those of animal and fungal homologs, whereas other plant Puf proteins demonstrate extensive variability in these amino acids. Three-dimensional modeling revealed that the predicted structure of this domain in plant Puf proteins provides a suitable surface for binding RNA. Electrophoretic gel mobility shift experiments showed that the Arabidopsis AtPum2 PUM-HD binds with high affinity to BoxB of the Drosophila Nanos Response Element I (NRE1 RNA, whereas a point mutation in the core of the NRE1 resulted in a significant reduction in binding affinity. Transient expression of several of the Arabidopsis Puf proteins as fluorescent protein fusions revealed a dynamic, punctate cytoplasmic pattern of localization for most of these proteins. The presence of predicted nuclear export signals and accumulation of AtPuf proteins in the nucleus after treatment of cells with leptomycin B demonstrated that shuttling of these proteins between the cytosol and nucleus is common among these proteins. In addition to the cytoplasmically enriched AtPum proteins, two AtPum proteins showed nuclear targeting with enrichment in the nucleolus. Conclusions The Puf family of RNA-binding proteins in plants consists of a greater number of members than any other model species studied to
Hydraulic modelling of the CARA Fuel element
International Nuclear Information System (INIS)
Brasnarof, Daniel O.; Juanico, Luis; Giorgi, M.; Ghiselli, Alberto M.; Zampach, Ruben; Fiori, Jose M.; Yedros, Pablo A.
2004-01-01
The CARA fuel element is been developing by the National Atomic Energy Commission for both Argentinean PHWRs. In order to keep the hydraulic restriction in their fuel channels, one of CARA's goals is to keep its similarity with both present fuel elements. In this paper is presented pressure drop test performed at a low-pressure facility (Reynolds numbers between 5x10 4 and 1,5x10 5 ) and rational base models for their spacer grid and rod assembly. Using these models, we could estimate the CARA hydraulic performance in reactor conditions that have shown to be satisfactory. (author) [es
Element-by-element parallel spectral-element methods for 3-D teleseismic wave modeling
Liu, Shaolin
2017-09-28
The development of an efficient algorithm for teleseismic wave field modeling is valuable for calculating the gradients of the misfit function (termed misfit gradients) or Fréchet derivatives when the teleseismic waveform is used for adjoint tomography. Here, we introduce an element-by-element parallel spectral-element method (EBE-SEM) for the efficient modeling of teleseismic wave field propagation in a reduced geology model. Under the plane-wave assumption, the frequency-wavenumber (FK) technique is implemented to compute the boundary wave field used to construct the boundary condition of the teleseismic wave incidence. To reduce the memory required for the storage of the boundary wave field for the incidence boundary condition, a strategy is introduced to efficiently store the boundary wave field on the model boundary. The perfectly matched layers absorbing boundary condition (PML ABC) is formulated using the EBE-SEM to absorb the scattered wave field from the model interior. The misfit gradient can easily be constructed in each time step during the calculation of the adjoint wave field. Three synthetic examples demonstrate the validity of the EBE-SEM for use in teleseismic wave field modeling and the misfit gradient calculation.
Discrete element modeling of microstructure of nacre
Chandler, Mei Qiang; Cheng, Jing-Ru C.
2018-04-01
The microstructure of nacre consists of polygon-shaped aragonite mineral tablets bonded by very thin layers of organic materials and is organized in a brick-mortar morphology. In this research, the discrete element method was utilized to model this structure. The aragonite mineral tablets were modeled with three-dimensional polygon particles generated by the Voronoi tessellation method to represent the Voronoi-like patterns of mineral tablets assembly observed in experiments. The organic matrix was modeled with a group of spring elements. The constitutive relations of the spring elements were inspired from the experimental results of organic molecules from the literature. The mineral bridges were modeled with simple elastic bonds with the parameters based on experimental data from the literature. The bulk stress-strain responses from the models agreed well with experimental results. The model results show that the mineral bridges play important roles in providing the stiffness and yield strength for the nacre, while the organic matrix in providing the ductility for the nacre. This work demonstrated the suitability of particle methods for modeling microstructures of nacre.
On constitutive modelling in finite element analysis
International Nuclear Information System (INIS)
Bathe, K.J.; Snyder, M.D.; Cleary, M.P.
1979-01-01
This compact contains a brief introduction to the problems involved in constitutive modeling as well as an outline of the final paper to be submitted. Attention is focussed on three important areas: (1) the need for using theoretically sound material models and the importance of recognizing the limitations of the models, (2) the problem of developing stable and effective numerical representations of the models, and (3) the necessity for selection of an appropriate finite element mesh that can capture the actual physical response of the complete structure. In the final paper, we will be presenting our recent research results pertaining to each of these problem areas. (orig.)
Boundary element method for modelling creep behaviour
International Nuclear Information System (INIS)
Zarina Masood; Shah Nor Basri; Abdel Majid Hamouda; Prithvi Raj Arora
2002-01-01
A two dimensional initial strain direct boundary element method is proposed to numerically model the creep behaviour. The boundary of the body is discretized into quadratic element and the domain into quadratic quadrilaterals. The variables are also assumed to have a quadratic variation over the elements. The boundary integral equation is solved for each boundary node and assembled into a matrix. This matrix is solved by Gauss elimination with partial pivoting to obtain the variables on the boundary and in the interior. Due to the time-dependent nature of creep, the solution has to be derived over increments of time. Automatic time incrementation technique and backward Euler method for updating the variables are implemented to assure stability and accuracy of results. A flowchart of the solution strategy is also presented. (Author)
Subcellular Iron Localization Mechanisms in Plants
Directory of Open Access Journals (Sweden)
Emre Aksoy
2017-12-01
Full Text Available The basic micro-nutrient element iron (Fe is present as a cofactor in the active sites of many metalloproteins with important roles in the plant. On the other hand, since it is excessively reactive, excess accumulation in the cell triggers the production of reactive oxygen species, leading to cell death. Therefore, iron homeostasis in the cell is very important for plant growth. Once uptake into the roots, iron is distributed to the subcellular compartments. Subcellular iron transport and hence cellular iron homeostasis is carried out through synchronous control of different membrane protein families. It has been discovered that expression levels of these membrane proteins increase under iron deficiency. Examination of the tasks and regulations of these carriers is very important in terms of understanding the iron intake and distribution mechanisms in plants. Therefore, in this review, the transporters responsible for the uptake of iron into the cell and its subcellular distribution between organelles will be discussed with an emphasis on the current developments about these transporters.
Ecosystem element transport model for Lake Eckarfjaerden
Energy Technology Data Exchange (ETDEWEB)
Konovalenko, L.; Bradshaw, C. [The Department of Ecology, Environment and Plant Sciences, Stockholm University (Sweden); Andersson, E.; Kautsky, U. [Swedish Nuclear Fuel and Waste Management Co. - SKB (Sweden)
2014-07-01
The ecosystem transport model of elements was developed for Lake Eckarfjaerden located in the Forsmark area in Sweden. Forsmark has currently a low level repository (SFR) and a repository for spent fuel is planned. A large number of data collected during site-investigation program 2002-2009 for planning the repository were available for the creation of the compartment model based on carbon circulation, physical and biological processes (e.g. primary production, consumption, respiration). The model is site-specific in the sense that the food web model is adapted to the actual food web at the site, and most estimates of biomass and metabolic rates for the organisms and meteorological data originate from site data. The functional organism groups of Lake Eckarfjaerden were considered as separate compartments: bacterio-plankton, benthic bacteria, macro-algae, phytoplankton, zooplankton, fish, benthic fauna. Two functional groups of bacteria were taken into account for the reason that they have the highest biomass of all functional groups during the winter, comprising 36% of the total biomass. Effects of ecological parameters, such as bacteria and algae biomass, on redistribution of a hypothetical radionuclide release in the lake were examined. The ecosystem model was used to estimate the environmental transfer of several elements (U, Th, Ra) and their isotopes (U-238, U-234,Th-232, Ra-226) to various aquatic organisms in the lake, using element-specific distribution coefficients for suspended particle and sediment. Results of chemical analyses of the water, sediment and biota were used for model validation. The model gives estimates of concentration factors for fish based on modelling rather on in situ measurement, which reduces the uncertainties for many radionuclides with scarce of data. Document available in abstract form only. (authors)
Consistent biokinetic models for the actinide elements
International Nuclear Information System (INIS)
Leggett, R.W.
2001-01-01
The biokinetic models for Th, Np, Pu, Am and Cm currently recommended by the International Commission on Radiological Protection (ICRP) were developed within a generic framework that depicts gradual burial of skeletal activity in bone volume, depicts recycling of activity released to blood and links excretion to retention and translocation of activity. For other actinide elements such as Ac, Pa, Bk, Cf and Es, the ICRP still uses simplistic retention models that assign all skeletal activity to bone surface and depicts one-directional flow of activity from blood to long-term depositories to excreta. This mixture of updated and older models in ICRP documents has led to inconsistencies in dose estimates and interpretation of bioassay for radionuclides with reasonably similar biokinetics. This paper proposes new biokinetic models for Ac, Pa, Bk, Cf and Es that are consistent with the updated models for Th, Np, Pu, Am and Cm. The proposed models are developed within the ICRP's generic model framework for bone-surface-seeking radionuclides, and an effort has been made to develop parameter values that are consistent with results of comparative biokinetic data on the different actinide elements. (author)
Modelling optimization involving different types of elements in finite element analysis
International Nuclear Information System (INIS)
Wai, C M; Rivai, Ahmad; Bapokutty, Omar
2013-01-01
Finite elements are used to express the mechanical behaviour of a structure in finite element analysis. Therefore, the selection of the elements determines the quality of the analysis. The aim of this paper is to compare and contrast 1D element, 2D element, and 3D element used in finite element analysis. A simple case study was carried out on a standard W460x74 I-beam. The I-beam was modelled and analyzed statically with 1D elements, 2D elements and 3D elements. The results for the three separate finite element models were compared in terms of stresses, deformation and displacement of the I-beam. All three finite element models yield satisfactory results with acceptable errors. The advantages and limitations of these elements are discussed. 1D elements offer simplicity although lacking in their ability to model complicated geometry. 2D elements and 3D elements provide more detail yet sophisticated results which require more time and computer memory in the modelling process. It is also found that the choice of element in finite element analysis is influence by a few factors such as the geometry of the structure, desired analysis results, and the capability of the computer
Energy Technology Data Exchange (ETDEWEB)
Cai, Zhongli; Chattopadhyay, Niladri; Kwon, Yongkyu Luke [Department of Pharmaceutical Sciences, University of Toronto, Toronto, Ontario M5S 3M2 (Canada); Pignol, Jean-Philippe [Department of Radiation Oncology, University of Toronto, Toronto, Ontario M4N 3M5, Canada and Department of Medical Biophysics, University of Toronto, Toronto, Ontario M4N 3M5 (Canada); Lechtman, Eli [Department of Medical Biophysics, University of Toronto, Toronto, Ontario M4N 3M5 (Canada); Reilly, Raymond M. [Department of Pharmaceutical Sciences, University of Toronto, Toronto, Ontario M5S 3M2 (Canada); Department of Medical Imaging, University of Toronto, Toronto, Ontario M5S 3E2 (Canada); Toronto General Research Institute, University Health Network, Toronto, Ontario M5G 2C4 (Canada)
2013-11-15
Purpose: The authors’ aims were to model how various factors influence radiation dose enhancement by gold nanoparticles (AuNPs) and to propose a new modeling approach to the dose enhancement factor (DEF).Methods: The authors used Monte Carlo N-particle (MCNP 5) computer code to simulate photon and electron transport in cells. The authors modeled human breast cancer cells as a single cell, a monolayer, or a cluster of cells. Different numbers of 5, 30, or 50 nm AuNPs were placed in the extracellular space, on the cell surface, in the cytoplasm, or in the nucleus. Photon sources examined in the simulation included nine monoenergetic x-rays (10–100 keV), an x-ray beam (100 kVp), and {sup 125}I and {sup 103}Pd brachytherapy seeds. Both nuclear and cellular dose enhancement factors (NDEFs, CDEFs) were calculated. The ability of these metrics to predict the experimental DEF based on the clonogenic survival of MDA-MB-361 human breast cancer cells exposed to AuNPs and x-rays were compared.Results: NDEFs show a strong dependence on photon energies with peaks at 15, 30/40, and 90 keV. Cell model and subcellular location of AuNPs influence the peak position and value of NDEF. NDEFs decrease in the order of AuNPs in the nucleus, cytoplasm, cell membrane, and extracellular space. NDEFs also decrease in the order of AuNPs in a cell cluster, monolayer, and single cell if the photon energy is larger than 20 keV. NDEFs depend linearly on the number of AuNPs per cell. Similar trends were observed for CDEFs. NDEFs using the monolayer cell model were more predictive than either single cell or cluster cell models of the DEFs experimentally derived from the clonogenic survival of cells cultured as a monolayer. The amount of AuNPs required to double the prescribed dose in terms of mg Au/g tissue decreases as the size of AuNPs increases, especially when AuNPs are in the nucleus and the cytoplasm. For 40 keV x-rays and a cluster of cells, to double the prescribed x-ray dose (NDEF = 2
Mean-field models and superheavy elements
International Nuclear Information System (INIS)
Reinhard, P.G.; Bender, M.; Maruhn, J.A.; Frankfurt Univ.
2001-03-01
We discuss the performance of two widely used nuclear mean-field models, the relativistic mean-field theory (RMF) and the non-relativistic Skyrme-Hartree-Fock approach (SHF), with particular emphasis on the description of superheavy elements (SHE). We provide a short introduction to the SHF and RMF, the relations between these two approaches and the relations to other nuclear structure models, briefly review the basic properties with respect to normal nuclear observables, and finally present and discuss recent results on the binding properties of SHE computed with a broad selection of SHF and RMF parametrisations. (orig.)
Subcellular Nanoparticle Distribution from Light Transmission Spectroscopy
Deatsch, Alison; Sun, Nan; Johnson, Jeffrey; Stack, Sharon; Tanner, Carol; Ruggiero, Steven
We have measured the particle-size distribution (PSD) of subcellular structures in plant and animal cells. We have employed a new technique developed by our group, Light Transmission Spectroscopy-combined with cell fractionation-to accurately measure PSDs over a wide size range: from 10 nm to 3000nm, which includes objects from the size of individual proteins to organelles. To date our experiments have included cultured human oral cells and spinach cells. These results show a power-law dependence of particle density with particle diameter, implying a universality of the packing distribution. We discuss modeling the cell as a self-similar (fractal) body comprised of spheres on all size scales. This goal of this work is to obtain a better understanding of the fundamental nature of particle packing within cells in order to enrich our knowledge of the structure, function, and interactions of sub-cellular nanostructures across cell types.
Modeling the element cycle of aquatic plants
International Nuclear Information System (INIS)
Asaeda, Takashi
2007-01-01
Aquatic plants play an important role in element cycles in wetlands and the efficiency of the process is extremely related to their proportional biomass allocation to above- and belowground organs. Therefore, the framework of most macrophyte productivity models is usually similar with a mass-balance approach consisting of gross production, respiration and mortality losses and the translocation between organs. These growth models are incorporated with decomposition models to evaluate the annual cycle of elements. Perennial emergent macrophytes with a relatively large biomass have a particularly important role in element cycles. Their phenological stages, such as the beginning of hibernation of belowground rhizome systems, emergence of new shoots in spring with resources stocked in the rhizomes, flowering, downward translocation of photosynthetic products later on and then the mortality of the aboveground system in late autumn, depend on the environmental conditions, basically the nutrients, water depth, climatic variations, etc. Although some species retain standing dead shoots for a long time, dead shoots easily fall into water, starting to decompose in the immediate aftermath. However, their decomposition rates in the water are relatively low, causing to accumulate large amounts of organic sediments on the bottom. Together with the deposition of allochthonous suspended matters in the stand, this process decreases the water depth, transforming wetlands gradually into land. The depth of penetration of roots into the sediments to uptake nutrients and water is extremely site specific, however, in water-logged areas, the maximum penetrable depth may be approximately estimated by considering the ability of oxygen transport into the rhizome system. The growth of perennial submerged plants is also estimated by a process similar to that of emergent macrophytes. However, compared with emergent macrophytes, the root system of submerged macrophytes is weaker, and the nutrient
Subcellular distribution of curium in beagle liver
International Nuclear Information System (INIS)
Bruenger, F.W.; Grube, B.J.; Atherton, D.R.; Taylor, G.N.; Stevens, W.
1976-01-01
The subcellular distribution of curium ( 243 244 Cm) was studied in canine liver from 2 hr to 47 days after injection of 3 μCi 243 244 Cm/kg of body weight. The pattern of distribution for Cm was similar to other trivalent actinide elements studied previously (Am, Cf). Initially (2 hr), most of the nuclide was found in the cytosol and at least 90 percent was protein bound. About 70 percent of the Cm was bound to ferritin, approximately 5 percent was associated with a protein of MW approximately 200,000, and approximately 25 percent was found in the low-molecular-weight region (approximately 5000). The decrease in the Cm content of cytosol, nuclei, and microsomes coincided with an increase in the amount associated with mitochondria and lysosomes. The concentration of the Cm in the mitochondrial fraction was higher than it was in the lysosomal fraction at each time studied. In the mitochondrial fraction approximately 30 percent of the Cm was bound to membranous or granular material, and 70 percent was found in the soluble fraction. The Cm concentration initially associated with cell nuclei was high but had diminished to 20 percent of the 2 hr concentration by 20 days post injection (PI). The subcellular distribution of Cm in the liver of a dog which had received the same dose and was terminated because of severe liver damage was studied at 384 days PI. The liver weighed 130 g and contained approximately 30 percent of the injected Cm. In contrast, a normal liver weighs 280 g and at 2 hr PI contains approximately 40 percent of the injected dose. The subcellular distribution of Cm in this severely damaged liver differed from the pattern observed at earlier times after injection. The relative concentration of Cm in the cytosol was doubled; it was higher in the nuclei-debris fraction; and it was lower in the mitochondrial and lysosomal fractions when compared to earlier times
Discrete element modelling of bedload transport
Loyer, A.; Frey, P.
2011-12-01
Discrete element modelling (DEM) has been widely used in solid mechanics and in granular physics. In this type of modelling, each individual particle is taken into account and intergranular interactions are modelled with simple laws (e.g. Coulomb friction). Gravity and contact forces permit to solve the dynamical behaviour of the system. DEM is interesting to model configurations and access to parameters not directly available in laboratory experimentation, hence the term "numerical experimentations" sometimes used to describe DEM. DEM was used to model bedload transport experiments performed at the particle scale with spherical glass beads in a steep and narrow flume. Bedload is the larger material that is transported on the bed on stream channels. It has a great geomorphic impact. Physical processes ruling bedload transport and more generally coarse-particle/fluid systems are poorly known, arguably because granular interactions have been somewhat neglected. An existing DEM code (PFC3D) already computing granular interactions was used. We implemented basic hydrodynamic forces to model the fluid interactions (buoyancy, drag, lift). The idea was to use the minimum number of ingredients to match the experimental results. Experiments were performed with one-size and two-size mixtures of coarse spherical glass beads entrained by a shallow turbulent and supercritical water flow down a steep channel with a mobile bed. The particle diameters were 4 and 6mm, the channel width 6.5mm (about the same width as the coarser particles) and the channel inclination was typically 10%. The water flow rate and the particle rate were kept constant at the upstream entrance and adjusted to obtain bedload transport equilibrium. Flows were filmed from the side by a high-speed camera. Using image processing algorithms made it possible to determine the position, velocity and trajectory of both smaller and coarser particles. Modelled and experimental particle velocity and concentration depth
Some properties for modeling of fuel elements
International Nuclear Information System (INIS)
Nichols, F.A.
1979-01-01
Two areas key to the materials modeling of fuel element behavior are discussed. The relative importance of atomic diffusion vs. bubble migration is first surveyed and the interplay of bubble mobility and re-solution parameter is highlighted. It is concluded that biased bubble migration at higher temperatures is required to explain available gas-release data, especially during transients. At intermediate temperatures, random bubble migration is required to explain both gas-release rates and the observation of large (approx. 700A) intragranular bubbles following in-pile and post-irradiation transients. Different fuel models employ different values of re-solution parameter, both below and above an experimentally determined value. Bubble mobilities are deduced to approach theoretical, surface diffusion-controlled values during transients, but they may be somewhat less mobile during steady-state operation. Next, the present understanding of radiation-induced hardening and creep is discussed, highlighting the interplay of these two phenomena. An overall constitutive scheme is presented and predictions of failure limits are deduced therefrom employing instability analysis
Finite element modelling of composite castellated beam
Directory of Open Access Journals (Sweden)
Frans Richard
2017-01-01
Full Text Available Nowadays, castellated beam becomes popular in building structural as beam members. This is due to several advantages of castellated beam such as increased depth without any additional mass, passing the underfloor service ducts without changing of story elevation. However, the presence of holes can develop various local effects such as local buckling, lateral torsional buckling caused by compression force at the flange section of the steel beam. Many studies have investigated the failure mechanism of castellated beam and one technique which can prevent the beam fall into local failure is the use of reinforced concrete slab as lateral support on castellated beam, so called composite castellated beam. Besides of preventing the local failure of castellated beam, the concrete slab can increase the plasticity moment of the composite castellated beam section which can deliver into increasing the ultimate load of the beam. The aim of this numerical studies of composite castellated beam on certain loading condition (monotonic quasi-static loading. ABAQUS was used for finite element modelling purpose and compared with the experimental test for checking the reliability of the model. The result shows that the ultimate load of the composite castellated beam reached 6.24 times than the ultimate load of the solid I beam and 1.2 times compared the composite beam.
Calibration of discrete element model parameters: soybeans
Ghodki, Bhupendra M.; Patel, Manish; Namdeo, Rohit; Carpenter, Gopal
2018-05-01
Discrete element method (DEM) simulations are broadly used to get an insight of flow characteristics of granular materials in complex particulate systems. DEM input parameters for a model are the critical prerequisite for an efficient simulation. Thus, the present investigation aims to determine DEM input parameters for Hertz-Mindlin model using soybeans as a granular material. To achieve this aim, widely acceptable calibration approach was used having standard box-type apparatus. Further, qualitative and quantitative findings such as particle profile, height of kernels retaining the acrylic wall, and angle of repose of experiments and numerical simulations were compared to get the parameters. The calibrated set of DEM input parameters includes the following (a) material properties: particle geometric mean diameter (6.24 mm); spherical shape; particle density (1220 kg m^{-3} ), and (b) interaction parameters such as particle-particle: coefficient of restitution (0.17); coefficient of static friction (0.26); coefficient of rolling friction (0.08), and particle-wall: coefficient of restitution (0.35); coefficient of static friction (0.30); coefficient of rolling friction (0.08). The results may adequately be used to simulate particle scale mechanics (grain commingling, flow/motion, forces, etc) of soybeans in post-harvest machinery and devices.
Finite-element modeling and micromagnetic modeling of perpendicular writers
Heinonen, Olle; Bozeman, Steven P.
2006-04-01
We compare finite-element modeling (FEM) and fully micromagnetic modeling results of four prototypical writers for perpendicular recording. In general, the agreement between the two models is quite good in the vicinity of saturated or near-saturated magnetic material, such as the pole tip, for quantities such as the magnetic field, the gradient of the magnetic field and the write width. However, in the vicinity of magnetic material far from saturation, e.g., return pole or trailing edge write shield, there can be large qualitative and quantitative differences.
Modelling drawbeads with finite elements and verification
Carleer, B.D.; Carleer, B.D.; Vreede, P.T.; Vreede, P.T.; Louwes, M.F.M.; Louwes, M.F.M.; Huetink, Han
1994-01-01
Drawbeads are commonly used in deep drawing processes to control the flow of the blank during the forming operation. In finite element simulations of deep drawing the drawbead geometries are seldom included because of the small radii; because of these small radii a very large number of elements is
Matrix Elements in Fermion Dynamical Symmetry Model
Institute of Scientific and Technical Information of China (English)
LIU Guang-Zhou; LIU Wei
2002-01-01
In a neutron-proton system, the matrix elements of the generators for SO(8) × SO(8) symmetry areconstructed explicitly, and with these matrix elements the low-lying excitation spectra obtained by diagonalization arepresented. The excitation spectra for SO(7) nuclei Pd and Ru isotopes and SO(6) r-soft rotational nuclei Xe, Ba, andCe isotopes are calculated, and comparison with the experimental results is carried out.
Matrix Elements in Fermion Dynamical Symmetry Model
Institute of Scientific and Technical Information of China (English)
LIUGuang－Zhou; LIUWei
2002-01-01
In a neutron-proton system,the matrix elements of the generators for SO(8)×SO(8) symmetry are constructed exp;icitly,and with these matrix elements the low-lying excitation spsectra obtained by diagonalization are presented.The excitation spectra for SO(7) nuclei Pd and Ru isotopes and SO(6) r-soft rotational nuclei Xe,Ba,and Ce isotopes are calculated,and comparison with the experimental results is carried out.
Discrete element modeling of subglacial sediment deformation
DEFF Research Database (Denmark)
Damsgaard, Anders; Egholm, David L.; Piotrowski, Jan A.
2013-01-01
The Discrete Element Method (DEM) is used in this study to explore the highly nonlinear dynamics of a granular bed when exposed to stress conditions comparable to those at the bed of warm-based glaciers. Complementary to analog experiments, the numerical approach allows a detailed analysis...
Discrete element modeling of subglacial sediment deformation
DEFF Research Database (Denmark)
Damsgaard, Anders; Egholm, David L.; Piotrowski, Jan A.
The Discrete Element Method (DEM) is used to explore the highly nonlinear dynamics of a granular bed when exposed to stress conditions comparable to those at the bed of warm-based glaciers. In the DEM, the material is simulated on a grain-by-grain basis, and defining the micromechanical properties...
Finite element modelling of solidification phenomena
Indian Academy of Sciences (India)
Unknown
Abstract. The process of solidification process is complex in nature and the simulation of such process is required in industry before it is actually undertaken. Finite element method is used to simulate the heat transfer process accompanying the solidification process. The metal and the mould along with the air gap formation ...
Thermal model of the whole element furnace
International Nuclear Information System (INIS)
Cramer, E.R.
1998-01-01
A detailed thermal analysis was performed to calculate temperatures in the whole element test furnace that is used to conduct drying studies of N-Reactor fuel. The purpose of this analysis was to establish the thermal characteristics of the test system and to provide a basis for post-test analysis
Performance Modelling of Timber Facade Elements
Surmeli-Anac, A.N.
2013-01-01
Windows and doors are essential elements of buildings. These seemingly simple components have become increasingly complex over the last decades. They have to fulfil an increased number of functions which ask for contradictory solutions and need to comply with more and more severe requirements.
Finite element model for heat conduction in jointed rock masses
International Nuclear Information System (INIS)
Gartling, D.K.; Thomas, R.K.
1981-01-01
A computatonal procedure for simulating heat conduction in a fractured rock mass is proposed and illustrated in the present paper. The method makes use of a simple local model for conduction in the vicinity of a single open fracture. The distributions of fractures and fracture properties within the finite element model are based on a statistical representation of geologic field data. Fracture behavior is included in the finite element computation by locating local, discrete fractures at the element integration points
Plasma effects on subcellular structures
International Nuclear Information System (INIS)
Gweon, Bomi; Kim, Dan Bee; Jung, Heesoo; Choe, Wonho; Kim, Daeyeon; Shin, Jennifer H.
2010-01-01
Atmospheric pressure helium plasma treated human hepatocytes exhibit distinctive zones of necrotic and live cells separated by a void. We propose that plasma induced necrosis is attributed to plasma species such as oxygen radicals, charged particles, metastables and/or severe disruption of charged cytoskeletal proteins. Interestingly, uncharged cytoskeletal intermediate filaments are only minimally disturbed by plasma, elucidating the possibility of plasma induced electrostatic effects selectively destroying charged proteins. These bona fide plasma effects, which inflict alterations in specific subcellular structures leading to necrosis and cellular detachment, were not observed by application of helium flow or electric field alone.
CONTRIBUTIONS TO THE FINITE ELEMENT MODELING OF LINEAR ULTRASONIC MOTORS
Directory of Open Access Journals (Sweden)
Oana CHIVU
2013-05-01
Full Text Available The present paper is concerned with the main modeling elements as produced by means of thefinite element method of linear ultrasonic motors. Hence, first the model is designed and then a modaland harmonic analysis are carried out in view of outlining the main outcomes
Evaluation of two models for predicting elemental accumulation by arthropods
International Nuclear Information System (INIS)
Webster, J.R.; Crossley, D.A. Jr.
1978-01-01
Two different models have been proposed for predicting elemental accumulation by arthropods. Parameters of both models can be quantified from radioisotope elimination experiments. Our analysis of the 2 models shows that both predict identical elemental accumulation for a whole organism, though differing in the accumulation in body and gut. We quantified both models with experimental data from 134 Cs and 85 Sr elimination by crickets. Computer simulations of radioisotope accumulation were then compared with actual accumulation experiments. Neither model showed exact fit to the experimental data, though both showed the general pattern of elemental accumulation
Finite element model updating using bayesian framework and modal properties
CSIR Research Space (South Africa)
Marwala, T
2005-01-01
Full Text Available Finite element (FE) models are widely used to predict the dynamic characteristics of aerospace structures. These models often give results that differ from measured results and therefore need to be updated to match measured results. Some...
Modelling bucket excavation by finite element
Pecingina, O. M.
2015-11-01
Changes in geological components of the layers from lignite pits have an impact on the sustainability of the cup path elements and under the action of excavation force appear efforts leading to deformation of the entire assembly. Application of finite element method in the optimization of components leads to economic growth, to increase the reliability and durability of the studied machine parts thus the machine. It is obvious usefulness of knowledge the state of mechanical tensions that the designed piece or the assembly not to break under the action of tensions that must cope during operation. In the course of excavation work on all bucket cutting force components, the first coming into contact with the material being excavated cutting edge. Therefore in the study with finite element analysis is retained only cutting edge. To study the field of stress and strain on the cutting edge will be created geometric patterns for each type of cup this will be subject to static analysis. The geometric design retains the cutting edge shape and on this on the tooth cassette location will apply an areal force on the abutment tooth. The cutting edge real pattern is subjected to finite element study for the worst case of rock cutting by symmetrical and asymmetrical cups whose profile is different. The purpose of this paper is to determine the displacement and tensions field for both profiles considering the maximum force applied on the cutting edge and the depth of the cutting is equal with the width of the cutting edge of the tooth. It will consider the worst case when on the structure will act both the tangential force and radial force on the bucket profile. For determination of stress and strain field on the form design of cutting edge profile will apply maximum force assuming uniform distribution and on the edge surface force will apply a radial force. After geometric patterns discretization on the cutting knives and determining stress field, can be seen that at the
Modeling Human Elements of Decision-Making
2002-06-01
include factors such as personality, emotion , and level of expertise, which vary from individual to individual. The process of decision - making during... rational choice theories such as utility theory, to more descriptive psychological models that focus more on the process of decision - making ...descriptive nature, they provide a more realistic representation of human decision - making than the rationally based models. However these models do
Energy Technology Data Exchange (ETDEWEB)
Taborda, A; Benabdallah, N; Desbree, A [Institut de Radioprotection et de Surete Nucleaire, Fontenay-aux-roses (France)
2015-06-15
Purpose: To perform a dosimetry study at the sub-cellular scale of Auger-electron emitter 99m-Tc using a mouse single thyroid cellular model to investigate the contribution of the 99m-Tc Auger-electrons to the absorbed dose and possible link to the thyroid stunning in in vivo experiments in mice, recently reported in literature. Methods: The simulation of S-values for Auger-electron emitting radionuclides was performed using both the recent MCNP6 software and the Geant4-DNA extension of the Geant4 toolkit. The dosimetric calculations were validated through comparison with results from literature, using a simple model of a single cell consisting of two concentric spheres of unit density water and for six Auger-electron emitting radionuclides. Furthermore, the S-values were calculated using a single thyroid follicle model for uniformly distributed 123-I and 125-I radionuclides and compared with published S-values. After validation, the simulation of the S-values was performed for the 99m-Tc radionuclide within the several mouse thyroid follicle cellular compartments, considering the radiative and non-radiative transitions of the 99m-Tc radiation spectrum. Results: The calculated S-values using MCNP6 are in good agreement with the results from literature, validating its use for the 99m-Tc S-values calculations. The most significant absorbed dose corresponds to the case where the radionuclide is uniformly distributed in the follicular cell’s nucleus, with a S-value of 7.8 mGy/disintegration, due mainly to the absorbed Auger-electrons. The results show that, at a sub-cellular scale, the emitted X-rays and gamma particles do not contribute significantly to the absorbed dose. Conclusion: In this work, MCNP6 was validated for dosimetric studies at the sub-cellular scale. It was shown that the contribution of the Auger-electrons to the absorbed dose is important at this scale compared to the emitted photons’ contribution and can’t be neglected. The obtained S
Imaging Subcellular Structures in the Living Zebrafish Embryo.
Engerer, Peter; Plucinska, Gabriela; Thong, Rachel; Trovò, Laura; Paquet, Dominik; Godinho, Leanne
2016-04-02
In vivo imaging provides unprecedented access to the dynamic behavior of cellular and subcellular structures in their natural context. Performing such imaging experiments in higher vertebrates such as mammals generally requires surgical access to the system under study. The optical accessibility of embryonic and larval zebrafish allows such invasive procedures to be circumvented and permits imaging in the intact organism. Indeed the zebrafish is now a well-established model to visualize dynamic cellular behaviors using in vivo microscopy in a wide range of developmental contexts from proliferation to migration and differentiation. A more recent development is the increasing use of zebrafish to study subcellular events including mitochondrial trafficking and centrosome dynamics. The relative ease with which these subcellular structures can be genetically labeled by fluorescent proteins and the use of light microscopy techniques to image them is transforming the zebrafish into an in vivo model of cell biology. Here we describe methods to generate genetic constructs that fluorescently label organelles, highlighting mitochondria and centrosomes as specific examples. We use the bipartite Gal4-UAS system in multiple configurations to restrict expression to specific cell-types and provide protocols to generate transiently expressing and stable transgenic fish. Finally, we provide guidelines for choosing light microscopy methods that are most suitable for imaging subcellular dynamics.
Element-by-element parallel spectral-element methods for 3-D teleseismic wave modeling
Liu, Shaolin; Yang, Dinghui; Dong, Xingpeng; Liu, Qiancheng; Zheng, Yongchang
2017-01-01
The development of an efficient algorithm for teleseismic wave field modeling is valuable for calculating the gradients of the misfit function (termed misfit gradients) or Fréchet derivatives when the teleseismic waveform is used for adjoint
Towards improved modeling of steel-concrete composite wall elements
International Nuclear Information System (INIS)
Vecchio, Frank J.; McQuade, Ian
2011-01-01
Highlights: → Improved analysis of double skinned steel concrete composite containment walls. → Smeared rotating crack concept applied in formulation of new analytical model. → Model implemented into finite element program; numerically stable and robust. → Models behavior of shear-critical elements with greater ease and improved accuracy. → Accurate assessments of strength, deformation and failure mode of test specimens. - Abstract: The Disturbed Stress Field Model, a smeared rotating crack model for reinforced concrete based on the Modified Compression Field Theory, is adapted to the analysis of double-skin steel-concrete wall elements. The computational model is then incorporated into a two-dimensional nonlinear finite element analysis algorithm. Verification studies are undertaken by modeling various test specimens, including panel elements subject to uniaxial compression, panel elements subjected to in-plane shear, and wall specimens subjected to reversed cyclic lateral displacements. In all cases, the analysis model is found to provide accurate calculations of structural load capacities, pre- and post-peak displacement responses, post-peak ductility, chronology of damage, and ultimate failure mode. Minor deficiencies are found in regards to the accurate portrayal of faceplate buckling and the effects of interfacial slip between the faceplates and the concrete. Other aspects of the modeling procedure that are in need of further research and development are also identified and discussed.
Magnetic materials and 3D finite element modeling
Bastos, Joao Pedro A
2014-01-01
Magnetic Materials and 3D Finite Element Modeling explores material characterization and finite element modeling (FEM) applications. This book relates to electromagnetic analysis based on Maxwell’s equations and application of the finite element (FE) method to low frequency devices. A great source for senior undergraduate and graduate students in electromagnetics, it also supports industry professionals working in magnetics, electromagnetics, ferromagnetic materials science and electrical engineering. The authors present current concepts on ferromagnetic material characterizations and losses. They provide introductory material; highlight basic electromagnetics, present experimental and numerical modeling related to losses and focus on FEM applied to 3D applications. They also explain various formulations, and discuss numerical codes.
Finite Element Modeling of Airflow During Phonation
Directory of Open Access Journals (Sweden)
Šidlof P.
2010-07-01
Full Text Available In the paper a mathematical model of airflow in human vocal folds is presented. The geometry of the glottal channel is based on measurements of excised human larynges. The airflow is modeled by nonstationary incompressible Navier-Stokes equations in a 2D computational domain, which is deformed in time due to vocal fold vibration. The paper presents numerical results and focuses on flow separation in glottis. Quantitative data from numerical simulations are compared to results of measurements by Particle Image Velocimetry (PIV, performed on a scaled self-oscillating physical model of vocal folds.
finite element model for predicting residual stresses in shielded
African Journals Online (AJOL)
eobe
This paper investigates the prediction of residual stresses developed ... steel plates through Finite Element Model simulation and experiments. ... The experimental values as measured by the X-Ray diffractometer were of ... Based on this, it can be concluded that Finite Element .... Comparison of Residual Stresses from X.
Parallel direct solver for finite element modeling of manufacturing processes
DEFF Research Database (Denmark)
Nielsen, Chris Valentin; Martins, P.A.F.
2017-01-01
The central processing unit (CPU) time is of paramount importance in finite element modeling of manufacturing processes. Because the most significant part of the CPU time is consumed in solving the main system of equations resulting from finite element assemblies, different approaches have been...
A Finite Element Model for convection-dominatel transport problems
International Nuclear Information System (INIS)
Carmo, E.G.D. do; Galeao, A.C.N.R.
1987-08-01
A new Protev-Galerkin Finite Element Model which automatically incorporates the search for the appropriate upwind direction is presented. It is also shown that modifying the Petrov-Galerkin weightin functions associated with elements adjascent to downwing boudaries effectively eliminates numerical oscillations normally obtained near boundary layers. (Author) [pt
Model Reduction in Dynamic Finite Element Analysis of Lightweight Structures
DEFF Research Database (Denmark)
Flodén, Ola; Persson, Kent; Sjöström, Anders
2012-01-01
models may be created by assembling models of floor and wall structures into large models of complete buildings. When assembling the floor and wall models, the number of degrees of freedom quickly increases to exceed the limits of computer capacity, at least in a reasonable amount of computational time...... Hz. Three different methods of model reduction were investigated; Guyan reduction, component mode synthesis and a third approach where a new finite element model was created with structural elements. Eigenvalue and steady-state analyses were performed in order to compare the errors...
Subcellular localization of pituitary enzymes
Smith, R. E.
1970-01-01
A cytochemical procedure is reported for identifying subcellular sites of enzymes hydrolyzing beta-naphthylamine substrates, and to study the sites of reaction product localization in cells of various tissues. Investigations using the substrate Leu 4-methoxy-8-naphthylamine, a capture with hexonium pararosaniline, and the final chelation of osmium have identified the hydrolyzing enzyme of rat liver cells; this enzyme localized on cell membranes with intense deposition in the areas of the parcanaliculi. The study of cells in the anterior pituitary of the rat showed the deposition of reaction product on cell membrane; and on the membranes of secretion granules contained within the cell. The deposition of reaction product on the cell membrane however showed no increase or decrease with changes in the physiological state of the gland and release of secretion granules from specific cells.
Automatic terrain modeling using transfinite element analysis
Collier, Nathan; Calo, Victor M.
2010-01-01
An automatic procedure for modeling terrain is developed based on L2 projection-based interpolation of discrete terrain data onto transfinite function spaces. The function space is refined automatically by the use of image processing techniques
Probabilistic finite element modeling of waste rollover
International Nuclear Information System (INIS)
Khaleel, M.A.; Cofer, W.F.; Al-fouqaha, A.A.
1995-09-01
Stratification of the wastes in many Hanford storage tanks has resulted in sludge layers which are capable of retaining gases formed by chemical and/or radiolytic reactions. As the gas is produced, the mechanisms of gas storage evolve until the resulting buoyancy in the sludge leads to instability, at which point the sludge ''rolls over'' and a significant volume of gas is suddenly released. Because the releases may contain flammable gases, these episodes of release are potentially hazardous. Mitigation techniques are desirable for more controlled releases at more frequent intervals. To aid the mitigation efforts, a methodology for predicting of sludge rollover at specific times is desired. This methodology would then provide a rational basis for the development of a schedule for the mitigation procedures. In addition, a knowledge of the sensitivity of the sludge rollovers to various physical and chemical properties within the tanks would provide direction for efforts to reduce the frequency and severity of these events. In this report, the use of probabilistic finite element analyses for computing the probability of rollover and the sensitivity of rollover probability to various parameters is described
Discrete element weld model, phase 2
Prakash, C.; Samonds, M.; Singhal, A. K.
1987-01-01
A numerical method was developed for analyzing the tungsten inert gas (TIG) welding process. The phenomena being modeled include melting under the arc and the flow in the melt under the action of buoyancy, surface tension, and electromagnetic forces. The latter entails the calculation of the electric potential and the computation of electric current and magnetic field therefrom. Melting may occur at a single temperature or over a temperature range, and the electrical and thermal conductivities can be a function of temperature. Results of sample calculations are presented and discussed at length. A major research contribution has been the development of numerical methodology for the calculation of phase change problems in a fixed grid framework. The model has been implemented on CHAM's general purpose computer code PHOENICS. The inputs to the computer model include: geometric parameters, material properties, and weld process parameters.
Finite Element Modeling of Airflow During Phonation
Czech Academy of Sciences Publication Activity Database
Šidlof, P.; Lunéville, E.; Chambeyron, C.; Doaré, O.; Chaigne, A.; Horáček, Jaromír
2010-01-01
Roč. 4, č. 1 (2010), s. 121-132 ISSN 1802-680X R&D Projects: GA AV ČR KJB200760801 Institutional research plan: CEZ:AV0Z20760514 Keywords : vocal fold s * airflow * numerical modeling * ALE * flow separation Subject RIV: BI - Acoustics
Validation of High Displacement Piezoelectric Actuator Finite Element Models
Taleghani, B. K.
2000-01-01
The paper presents the results obtained by using NASTRAN(Registered Trademark) and ANSYS(Regitered Trademark) finite element codes to predict doming of the THUNDER piezoelectric actuators during the manufacturing process and subsequent straining due to an applied input voltage. To effectively use such devices in engineering applications, modeling and characterization are essential. Length, width, dome height, and thickness are important parameters for users of such devices. Therefore, finite element models were used to assess the effects of these parameters. NASTRAN(Registered Trademark) and ANSYS(Registered Trademark) used different methods for modeling piezoelectric effects. In NASTRAN(Registered Trademark), a thermal analogy was used to represent voltage at nodes as equivalent temperatures, while ANSYS(Registered Trademark) processed the voltage directly using piezoelectric finite elements. The results of finite element models were validated by using the experimental results.
Elements of matrix modeling and computing with Matlab
White, Robert E
2006-01-01
As discrete models and computing have become more common, there is a need to study matrix computation and numerical linear algebra. Encompassing a diverse mathematical core, Elements of Matrix Modeling and Computing with MATLAB examines a variety of applications and their modeling processes, showing you how to develop matrix models and solve algebraic systems. Emphasizing practical skills, it creates a bridge from problems with two and three variables to more realistic problems that have additional variables. Elements of Matrix Modeling and Computing with MATLAB focuses on seven basic applicat
Automatic terrain modeling using transfinite element analysis
Collier, Nathan
2010-05-31
An automatic procedure for modeling terrain is developed based on L2 projection-based interpolation of discrete terrain data onto transfinite function spaces. The function space is refined automatically by the use of image processing techniques to detect regions of high error and the flexibility of the transfinite interpolation to add degrees of freedom to these areas. Examples are shown of a section of the Palo Duro Canyon in northern Texas.
Modeling 3D PCMI using the Extended Finite Element Method with higher order elements
Energy Technology Data Exchange (ETDEWEB)
Jiang, W. [Idaho National Lab. (INL), Idaho Falls, ID (United States); Spencer, Benjamin W. [Idaho National Lab. (INL), Idaho Falls, ID (United States)
2017-03-31
This report documents the recent development to enable XFEM to work with higher order elements. It also demonstrates the application of higher order (quadratic) elements to both 2D and 3D models of PCMI problems, where discrete fractures in the fuel are represented using XFEM. The modeling results demonstrate the ability of the higher order XFEM to accurately capture the effects of a crack on the response in the vicinity of the intersecting surfaces of cracked fuel and cladding, as well as represent smooth responses in the regions away from the crack.
Unstructured Spectral Element Model for Dispersive and Nonlinear Wave Propagation
DEFF Research Database (Denmark)
Engsig-Karup, Allan Peter; Eskilsson, Claes; Bigoni, Daniele
2016-01-01
We introduce a new stabilized high-order and unstructured numerical model for modeling fully nonlinear and dispersive water waves. The model is based on a nodal spectral element method of arbitrary order in space and a -transformed formulation due to Cai, Langtangen, Nielsen and Tveito (1998). In...
Finite element modeling and simulation with ANSYS workbench
Chen, Xiaolin
2014-01-01
IntroductionSome Basic ConceptsAn Example in FEA: Spring SystemOverview of ANSYS WorkbenchSummaryProblemsBars and TrussesIntroductionReview of the 1-D Elasticity TheoryModeling of TrussesFormulation of the Bar ElementExamples with Bar ElementsCase Study with ANSYS WorkbenchSummaryProblemsBeams and FramesIntroductionReview of the Beam TheoryModeling of Beams and FramesFormulation of the Beam ElementExamples with Beam ElementsCase Study with ANSYS WorkbenchSummaryProblemsTwo-Dimensional ElasticityIntroductionReview of 2-D Elasticity TheoryModeling of 2-D Elasticity ProblemsFormulation of the Pla
Modeling of porous concrete elements under load
Directory of Open Access Journals (Sweden)
Demchyna B.H.
2017-12-01
Full Text Available It is known that cell concretes are almost immediately destroyed under load, having reached certain critical stresses. Such kind of destruction is called a “catastrophic failure”. Process of crack formation is one of the main factors, influencing process of concrete destruction. Modern theory of crack formation is mainly based on the Griffith theory of destruction. However, the mentioned theory does not completely correspond to the structure of cell concrete with its cell structure, because the theory is intended for a solid body. The article presents one of the possible variants of modelling of the structure of cell concrete and gives some assumptions concerning the process of crack formation in such hollow, not solid environment.
Modeling of porous concrete elements under load
Demchyna, B. H.; Famuliak, Yu. Ye.; Demchyna, Kh. B.
2017-12-01
It is known that cell concretes are almost immediately destroyed under load, having reached certain critical stresses. Such kind of destruction is called a "catastrophic failure". Process of crack formation is one of the main factors, influencing process of concrete destruction. Modern theory of crack formation is mainly based on the Griffith theory of destruction. However, the mentioned theory does not completely correspond to the structure of cell concrete with its cell structure, because the theory is intended for a solid body. The article presents one of the possible variants of modelling of the structure of cell concrete and gives some assumptions concerning the process of crack formation in such hollow, not solid environment.
Pathways and Subcellular Compartmentation of NAD Biosynthesis in Human Cells
Nikiforov, Andrey; Dölle, Christian; Niere, Marc; Ziegler, Mathias
2011-01-01
NAD is a vital redox carrier, and its degradation is a key element of important regulatory pathways. NAD-mediated functions are compartmentalized and have to be fueled by specific biosynthetic routes. However, little is known about the different pathways, their subcellular distribution, and regulation in human cells. In particular, the route(s) to generate mitochondrial NAD, the largest subcellular pool, is still unknown. To visualize organellar NAD changes in cells, we targeted poly(ADP-ribose) polymerase activity into the mitochondrial matrix. This activity synthesized immunodetectable poly(ADP-ribose) depending on mitochondrial NAD availability. Based on this novel detector system, detailed subcellular enzyme localizations, and pharmacological inhibitors, we identified extracellular NAD precursors, their cytosolic conversions, and the pathway of mitochondrial NAD generation. Our results demonstrate that, besides nicotinamide and nicotinic acid, only the corresponding nucleosides readily enter the cells. Nucleotides (e.g. NAD and NMN) undergo extracellular degradation resulting in the formation of permeable precursors. These precursors can all be converted to cytosolic and mitochondrial NAD. For mitochondrial NAD synthesis, precursors are converted to NMN in the cytosol. When taken up into the organelles, NMN (together with ATP) serves as substrate of NMNAT3 to form NAD. NMNAT3 was conclusively localized to the mitochondrial matrix and is the only known enzyme of NAD synthesis residing within these organelles. We thus present a comprehensive dissection of mammalian NAD biosynthesis, the groundwork to understand regulation of NAD-mediated processes, and the organismal homeostasis of this fundamental molecule. PMID:21504897
Three dimensional mathematical model of tooth for finite element analysis
Directory of Open Access Journals (Sweden)
Puškar Tatjana
2010-01-01
Full Text Available Introduction. The mathematical model of the abutment tooth is the starting point of the finite element analysis of stress and deformation of dental structures. The simplest and easiest way is to form a model according to the literature data of dimensions and morphological characteristics of teeth. Our method is based on forming 3D models using standard geometrical forms (objects in programmes for solid modeling. Objective. Forming the mathematical model of abutment of the second upper premolar for finite element analysis of stress and deformation of dental structures. Methods. The abutment tooth has a form of a complex geometric object. It is suitable for modeling in programs for solid modeling SolidWorks. After analyzing the literature data about the morphological characteristics of teeth, we started the modeling dividing the tooth (complex geometric body into simple geometric bodies (cylinder, cone, pyramid,.... Connecting simple geometric bodies together or substricting bodies from the basic body, we formed complex geometric body, tooth. The model is then transferred into Abaqus, a computational programme for finite element analysis. Transferring the data was done by standard file format for transferring 3D models ACIS SAT. Results. Using the programme for solid modeling SolidWorks, we developed three models of abutment of the second maxillary premolar: the model of the intact abutment, the model of the endodontically treated tooth with two remaining cavity walls and the model of the endodontically treated tooth with two remaining walls and inserted post. Conclusion Mathematical models of the abutment made according to the literature data are very similar with the real abutment and the simplifications are minimal. These models enable calculations of stress and deformation of the dental structures. The finite element analysis provides useful information in understanding biomechanical problems and gives guidance for clinical research.
Directory of Open Access Journals (Sweden)
Karunesh Kumar
Full Text Available 14-3-3 proteins are a large multigenic family of regulatory proteins ubiquitously found in eukaryotes. In plants, 14-3-3 proteins are reported to play significant role in both development and response to stress stimuli. Therefore, considering their importance, genome-wide analyses have been performed in many plants including Arabidopsis, rice and soybean. But, till date, no comprehensive investigation has been conducted in any C4 panicoid crops. In view of this, the present study was performed to identify 8, 5 and 26 potential 14-3-3 gene family members in foxtail millet (Si14-3-3, sorghum (Sb14-3-3 and maize (Zm14-3-3, respectively. In silico characterization revealed large variations in their gene structures; segmental and tandem duplications have played a major role in expansion of these genes in foxtail millet and maize. Gene ontology annotation showed the participation of 14-3-3 proteins in diverse biological processes and molecular functions, and in silico expression profiling indicated their higher expression in all the investigated tissues. Comparative mapping was performed to derive the orthologous relationships between 14-3-3 genes of foxtail millet and other Poaceae members, which showed a higher, as well as similar percentage of orthology among these crops. Expression profiling of Si14-3-3 genes during different time-points of abiotic stress and hormonal treatments showed a differential expression pattern of these genes, and sub-cellular localization studies revealed the site of action of Si14-3-3 proteins within the cells. Further downstream characterization indicated the interaction of Si14-3-3 with a nucleocytoplasmic shuttling phosphoprotein (SiRSZ21A in a phosphorylation-dependent manner, and this demonstrates that Si14-3-3 might regulate the splicing events by binding with phosphorylated SiRSZ21A. Taken together, the present study is a comprehensive analysis of 14-3-3 gene family members in foxtail millet, sorghum and maize
Kumar, Karunesh; Muthamilarasan, Mehanathan; Bonthala, Venkata Suresh; Roy, Riti; Prasad, Manoj
2015-01-01
14-3-3 proteins are a large multigenic family of regulatory proteins ubiquitously found in eukaryotes. In plants, 14-3-3 proteins are reported to play significant role in both development and response to stress stimuli. Therefore, considering their importance, genome-wide analyses have been performed in many plants including Arabidopsis, rice and soybean. But, till date, no comprehensive investigation has been conducted in any C4 panicoid crops. In view of this, the present study was performed to identify 8, 5 and 26 potential 14-3-3 gene family members in foxtail millet (Si14-3-3), sorghum (Sb14-3-3) and maize (Zm14-3-3), respectively. In silico characterization revealed large variations in their gene structures; segmental and tandem duplications have played a major role in expansion of these genes in foxtail millet and maize. Gene ontology annotation showed the participation of 14-3-3 proteins in diverse biological processes and molecular functions, and in silico expression profiling indicated their higher expression in all the investigated tissues. Comparative mapping was performed to derive the orthologous relationships between 14-3-3 genes of foxtail millet and other Poaceae members, which showed a higher, as well as similar percentage of orthology among these crops. Expression profiling of Si14-3-3 genes during different time-points of abiotic stress and hormonal treatments showed a differential expression pattern of these genes, and sub-cellular localization studies revealed the site of action of Si14-3-3 proteins within the cells. Further downstream characterization indicated the interaction of Si14-3-3 with a nucleocytoplasmic shuttling phosphoprotein (SiRSZ21A) in a phosphorylation-dependent manner, and this demonstrates that Si14-3-3 might regulate the splicing events by binding with phosphorylated SiRSZ21A. Taken together, the present study is a comprehensive analysis of 14-3-3 gene family members in foxtail millet, sorghum and maize, which provides
Monoterpene biosynthesis potential of plant subcellular compartments
Dong, L.; Jongedijk, E.J.; Bouwmeester, H.J.; Krol, van der A.R.
2016-01-01
Subcellular monoterpene biosynthesis capacity based on local geranyl diphosphate (GDP) availability or locally boosted GDP production was determined for plastids, cytosol and mitochondria. A geraniol synthase (GES) was targeted to plastids, cytosol, or mitochondria. Transient expression in Nicotiana
Optogenetic Tools for Subcellular Applications in Neuroscience.
Rost, Benjamin R; Schneider-Warme, Franziska; Schmitz, Dietmar; Hegemann, Peter
2017-11-01
The ability to study cellular physiology using photosensitive, genetically encoded molecules has profoundly transformed neuroscience. The modern optogenetic toolbox includes fluorescent sensors to visualize signaling events in living cells and optogenetic actuators enabling manipulation of numerous cellular activities. Most optogenetic tools are not targeted to specific subcellular compartments but are localized with limited discrimination throughout the cell. Therefore, optogenetic activation often does not reflect context-dependent effects of highly localized intracellular signaling events. Subcellular targeting is required to achieve more specific optogenetic readouts and photomanipulation. Here we first provide a detailed overview of the available optogenetic tools with a focus on optogenetic actuators. Second, we review established strategies for targeting these tools to specific subcellular compartments. Finally, we discuss useful tools and targeting strategies that are currently missing from the optogenetics repertoire and provide suggestions for novel subcellular optogenetic applications. Copyright © 2017 Elsevier Inc. All rights reserved.
Finite element model for nonlinear shells of revolution
International Nuclear Information System (INIS)
Cook, W.A.
1979-01-01
Nuclear material shipping containers have shells of revolution as basic structural components. Analytically modeling the response of these containers to severe accident impact conditions requires a nonlinear shell-of-revolution model that accounts for both geometric and material nonlinearities. Existing models are limited to large displacements, small rotations, and nonlinear materials. The paper presents a finite element model for a nonlinear shell of revolution that will account for large displacements, large strains, large rotations, and nonlinear materials
Hualien forced vibration calculation with a finite element model
International Nuclear Information System (INIS)
Wang, F.; Gantenbein, F.; Nedelec, M.; Duretz, Ch.
1995-01-01
The forced vibration tests of the Hualien mock-up were useful to validate finite element models developed for soil-structure interaction. In this paper the two sets of tests with and without backfill were analysed. the methods used are based on finite element modeling for the soil. Two approaches were considered: calculation of soil impedance followed by the calculation of the transfer functions with a model taking into account the superstructure and the impedance; direct calculation of the soil-structure transfer functions, with the soil and the structure being represented in the same model by finite elements. Blind predictions and post-test calculations are presented and compared with the test results. (author). 4 refs., 8 figs., 2 tabs
SPLAI: Computational Finite Element Model for Sensor Networks
Directory of Open Access Journals (Sweden)
Ruzana Ishak
2006-01-01
Full Text Available Wireless sensor network refers to a group of sensors, linked by a wireless medium to perform distributed sensing task. The primary interest is their capability in monitoring the physical environment through the deployment of numerous tiny, intelligent, wireless networked sensor nodes. Our interest consists of a sensor network, which includes a few specialized nodes called processing elements that can perform some limited computational capabilities. In this paper, we propose a model called SPLAI that allows the network to compute a finite element problem where the processing elements are modeled as the nodes in the linear triangular approximation problem. Our model also considers the case of some failures of the sensors. A simulation model to visualize this network has been developed using C++ on the Windows environment.
The Finite Element Numerical Modelling of 3D Magnetotelluric
Directory of Open Access Journals (Sweden)
Ligang Cao
2014-01-01
Full Text Available The ideal numerical simulation of 3D magnetotelluric was restricted by the methodology complexity and the time-consuming calculation. Boundary values, the variation of weighted residual equation, and the hexahedral mesh generation method of finite element are three major causes. A finite element method for 3D magnetotelluric numerical modeling is presented in this paper as a solution for the problem mentioned above. In this algorithm, a hexahedral element coefficient matrix for magnetoelluric finite method is developed, which solves large-scale equations using preconditioned conjugate gradient of the first-type boundary conditions. This algorithm is verified using the homogeneous model, and the positive landform model, as well as the low resistance anomaly model.
FINITE ELEMENT MODELING OF THIN CIRCULAR SANDWICH PLATES DEFLECTION
Directory of Open Access Journals (Sweden)
K. S. Kurachka
2014-01-01
Full Text Available A mathematical model of a thin circular sandwich plate being under the vertical load is proposed. The model employs the finite element method and takes advantage of an axisymmetric finite element that leads to the small dimension of the resulting stiffness matrix and sufficient accuracy for practical calculations. The analytical expressions for computing local stiffness matrices are found, which can significantly speed up the process of forming the global stiffness matrix and increase the accuracy of calculations. A software is under development and verification. The discrepancy between the results of the mathematical model and those of analytical formulas for homogeneous thin circularsandwich plates does not exceed 7%.
Elements for modeling and design of centrifugal compressor housings
International Nuclear Information System (INIS)
Magoia, J.E.; Calderon, T.
1990-01-01
Various aspects of the structural analysis of centrifugal compressor housings are studied. These are usually used in different kinds of nuclear sites. Multiple areas of the analysis are evaluated with elastic models based on finite elements: sensitivity to different variables, quality of models on facing theoretical solutions and performed measurements. The development of an excentric bar element improved for the rigidized plate model, is included. The definition of criteria for a more efficient structural analysis as well as recommendations for the design of centrifugal compressor housings concludes the work. (Author) [es
Finite element modeling of the filament winding process using ABAQUS
Miltenberger, Louis C.
1992-01-01
A comprehensive stress model of the filament winding fabrication process, previously implemented in the finite element program, WACSAFE, was implemented using the ABAQUS finite element software package. This new implementation, referred to as the ABWACSAFE procedure, consists of the ABAQUS software and a pre/postprocessing routine that was developed to prepare necessary ABAQUS input files and process ABAQUS displacement results for stress and strain computation. The ABWACSAF...
Comment on 'Modelling of surface energies of elemental crystals'
International Nuclear Information System (INIS)
Li Jinping; Luo Xiaoguang; Hu Ping; Dong Shanliang
2009-01-01
Jiang et al (2004 J. Phys.: Condens. Matter 16 521) present a model based on the traditional broken-bond model for predicting surface energies of elemental crystals. It is found that bias errors can be produced in calculating the coordination numbers of surface atoms, especially in the prediction of high-Miller-index surface energies. (comment)
a finite element model for the analysis of bridge decks
African Journals Online (AJOL)
Dr Obe
A FINITE ELEMENT MODEL FOR THE ANALYSIS OF BRIDGE DECKS. NIGERIAN JOURNAL OF TECHNOLOGY, VOL. 27 NO.1, MARCH 2008. 59. (a) Beam-plate system. (b) T-beam structural model. Fig. 1 Beam-plate structure idealisations. The matrix displacement method of analysis is used. The continuum structure is.
Finite element modelling of fibre-reinforced brittle materials
Kullaa, J.
1997-01-01
The tensile constitutive behaviour of fibre-reinforced brittle materials can be extended to two or three dimensions by using the finite element method with crack models. The three approaches in this study include the smeared and discrete crack concepts and a multi-surface plasticity model. The
MODELS OF THE USE OF DISTANCE LEARNING ELEMENTS IN SCHOOL
Directory of Open Access Journals (Sweden)
Vasyl I. Kovalchuk
2017-09-01
Full Text Available The article presents three models of the use of elements of distance learning at school. All models partially or fully implement the training, interaction and collaboration of the participants in the educational process. The first model is determined by the use of open cloud services and Web 2.0 for the implementation of certain educational and managerial tasks of the school. The second model uses support for learning management and content creation. The introduction of the second model is possible with the development of the IT infrastructure of the school, the training of teachers for the use of distance learning technologies, the creation of electronic educational resources. The third model combines the use of Web 2.0 technologies and training and content management systems. Models of the use of elements of distance learning are presented of the results of regional research experimental work of schools.
Three-dimensional modeling with finite element codes
Energy Technology Data Exchange (ETDEWEB)
Druce, R.L.
1986-01-17
This paper describes work done to model magnetostatic field problems in three dimensions. Finite element codes, available at LLNL, and pre- and post-processors were used in the solution of the mathematical model, the output from which agreed well with the experimentally obtained data. The geometry used in this work was a cylinder with ports in the periphery and no current sources in the space modeled. 6 refs., 8 figs.
Coulomb matrix elements in multi-orbital Hubbard models.
Bünemann, Jörg; Gebhard, Florian
2017-04-26
Coulomb matrix elements are needed in all studies in solid-state theory that are based on Hubbard-type multi-orbital models. Due to symmetries, the matrix elements are not independent. We determine a set of independent Coulomb parameters for a d-shell and an f-shell and all point groups with up to 16 elements (O h , O, T d , T h , D 6h , and D 4h ). Furthermore, we express all other matrix elements as a function of the independent Coulomb parameters. Apart from the solution of the general point-group problem we investigate in detail the spherical approximation and first-order corrections to the spherical approximation.
Fuel element transfer cask modelling using MCNP technique
International Nuclear Information System (INIS)
Rosli Darmawan
2009-01-01
Full text: After operating for more than 25 years, some of the Reaktor TRIGA PUSPATI (RTP) fuel elements would have been depleted. A few addition and fuel reconfiguration exercises have to be conducted in order to maintain RTP capacity. Presently, RTP spent fuels are stored at the storage area inside RTP tank. The need to transfer the fuel element outside of RTP tank may be prevalence in the near future. The preparation shall be started from now. A fuel element transfer cask has been designed according to the recommendation by the fuel manufacturer and experience of other countries. A modelling using MCNP code has been conducted to analyse the design. The result shows that the design of transfer cask fuel element is safe for handling outside the RTP tank according to recent regulatory requirement. (author)
Fuel Element Transfer Cask Modelling Using MCNP Technique
International Nuclear Information System (INIS)
Darmawan, Rosli; Topah, Budiman Naim
2010-01-01
After operating for more than 25 years, some of the Reaktor TRIGA Puspati (RTP) fuel elements would have been depleted. A few addition and fuel reconfiguration exercises have to be conducted in order to maintain RTP capacity. Presently, RTP spent fuels are stored at the storage area inside RTP tank. The need to transfer the fuel element outside of RTP tank may be prevalence in the near future. The preparation shall be started from now. A fuel element transfer cask has been designed according to the recommendation by the fuel manufacturer and experience of other countries. A modelling using MCNP code has been conducted to analyse the design. The result shows that the design of transfer cask fuel element is safe for handling outside the RTP tank according to recent regulatory requirement.
The development of a curved beam element model applied to finite elements method
International Nuclear Information System (INIS)
Bento Filho, A.
1980-01-01
A procedure for the evaluation of the stiffness matrix for a thick curved beam element is developed, by means of the minimum potential energy principle, applied to finite elements. The displacement field is prescribed through polynomial expansions, and the interpolation model is determined by comparison of results obtained by the use of a sample of different expansions. As a limiting case of the curved beam, three cases of straight beams, with different dimensional ratios are analised, employing the approach proposed. Finally, an interpolation model is proposed and applied to a curved beam with great curvature. Desplacements and internal stresses are determined and the results are compared with those found in the literature. (Author) [pt
Protein subcellular localization prediction using artificial intelligence technology.
Nair, Rajesh; Rost, Burkhard
2008-01-01
Proteins perform many important tasks in living organisms, such as catalysis of biochemical reactions, transport of nutrients, and recognition and transmission of signals. The plethora of aspects of the role of any particular protein is referred to as its "function." One aspect of protein function that has been the target of intensive research by computational biologists is its subcellular localization. Proteins must be localized in the same subcellular compartment to cooperate toward a common physiological function. Aberrant subcellular localization of proteins can result in several diseases, including kidney stones, cancer, and Alzheimer's disease. To date, sequence homology remains the most widely used method for inferring the function of a protein. However, the application of advanced artificial intelligence (AI)-based techniques in recent years has resulted in significant improvements in our ability to predict the subcellular localization of a protein. The prediction accuracy has risen steadily over the years, in large part due to the application of AI-based methods such as hidden Markov models (HMMs), neural networks (NNs), and support vector machines (SVMs), although the availability of larger experimental datasets has also played a role. Automatic methods that mine textual information from the biological literature and molecular biology databases have considerably sped up the process of annotation for proteins for which some information regarding function is available in the literature. State-of-the-art methods based on NNs and HMMs can predict the presence of N-terminal sorting signals extremely accurately. Ab initio methods that predict subcellular localization for any protein sequence using only the native amino acid sequence and features predicted from the native sequence have shown the most remarkable improvements. The prediction accuracy of these methods has increased by over 30% in the past decade. The accuracy of these methods is now on par with
A holistic 3D finite element simulation model for thermoelectric power generator element
International Nuclear Information System (INIS)
Wu, Guangxi; Yu, Xiong
2014-01-01
Highlights: • Development of a holistic simulation model for the thermoelectric energy harvester. • Account for delta Seebeck coefficient and carrier charge densities variations. • Solution of thermo-electric coupling problem with finite element method. • Model capable of predicting phenomena not captured by traditional models. • A simulation tool for design of innovative TEM materials and structures. - Abstract: Harvesting the thermal energy stored in the ambient environment provides a potential sustainable energy source. Thermoelectric power generators have advantages of having no moving parts, being durable, and light-weighted. These unique features are advantageous for many applications (i.e., carry-on medical devices, embedded infrastructure sensors, aerospace, transportation, etc.). To ensure the efficient applications of thermoelectric energy harvesting system, the behaviors of such systems need to be fully understood. Finite element simulations provide important tools for such purpose. Although modeling the performance of thermoelectric modules has been conducted by many researchers, due to the complexity in solving the coupled problem, the influences of the effective Seebeck coefficient and carrier density variations on the performance of thermoelectric system are generally neglected. This results in an overestimation of the power generator performance under strong-ionization temperature region. This paper presents an advanced simulation model for thermoelectric elements that considers the effects of both factors. The mathematical basis of this model is firstly presented. Finite element simulations are then implemented on a thermoelectric power generator unit. The characteristics of the thermoelectric power generator and their relationship to its performance are discussed under different working temperature regions. The internal physics processes of the TEM harvester are analyzed from the results of computational simulations. The new model
Energy Technology Data Exchange (ETDEWEB)
Beaumelle, Léa [INRA, UR 251 PESSAC, 78026 Versailles Cedex (France); Gimbert, Frédéric [Laboratoire Chrono-Environnement, UMR 6249 University of Franche-Comté/CNRS Usc INRA, 16 route de Gray, 25030 Besançon Cedex (France); Hedde, Mickaël [INRA, UR 251 PESSAC, 78026 Versailles Cedex (France); Guérin, Annie [INRA, US 0010 LAS Laboratoire d' analyses des sols, 273 rue de Cambrai, 62000 Arras (France); Lamy, Isabelle, E-mail: lamy@versailles.inra.fr [INRA, UR 251 PESSAC, 78026 Versailles Cedex (France)
2015-07-01
Subcellular fractionation of metals in organisms was proposed as a better way to characterize metal bioaccumulation. Here we report the impact of a laboratory exposure to a wide range of field-metal contaminated soils on the subcellular partitioning of metals in the earthworm Aporrectodea caliginosa. Soils moderately contaminated were chosen to create a gradient of soil metal availability; covering ranges of both soil metal contents and of several soil parameters. Following exposure, Cd, Pb and Zn concentrations were determined both in total earthworm body and in three subcellular compartments: cytosolic, granular and debris fractions. Three distinct proxies of soil metal availability were investigated: CaCl{sub 2}-extractable content dissolved content predicted by a semi-mechanistic model and free ion concentration predicted by a geochemical speciation model. Subcellular partitionings of Cd and Pb were modified along the gradient of metal exposure, while stable Zn partitioning reflected regulation processes. Cd subcellular distribution responded more strongly to increasing soil Cd concentration than the total internal content, when Pb subcellular distribution and total internal content were similarly affected. Free ion concentrations were better descriptors of Cd and Pb subcellular distribution than CaCl{sub 2} extractable and dissolved metal concentrations. However, free ion concentrations and soil total metal contents were equivalent descriptors of the subcellular partitioning of Cd and Pb because they were highly correlated. Considering lowly contaminated soils, our results raise the question of the added value of three proxies of metal availability compared to soil total metal content in the assessment of metal bioavailability to earthworm. - Highlights: • Earthworms were exposed to a wide panel of historically contaminated soils • Subcellular partitioning of Cd, Pb and Zn was investigated in earthworms • Three proxies of soil metal availability were
Analytical and finite element modeling of grounding systems
Energy Technology Data Exchange (ETDEWEB)
Luz, Mauricio Valencia Ferreira da [University of Santa Catarina (UFSC), Florianopolis, SC (Brazil)], E-mail: mauricio@grucad.ufsc.br; Dular, Patrick [University of Liege (Belgium). Institut Montefiore], E-mail: Patrick.Dular@ulg.ac.be
2007-07-01
Grounding is the art of making an electrical connection to the earth. This paper deals with the analytical and finite element modeling of grounding systems. An electrokinetic formulation using a scalar potential can benefit from floating potentials to define global quantities such as electric voltages and currents. The application concerns a single vertical grounding with one, two and three-layer soil, where the superior extremity stays in the surface of the soil. This problem has been modeled using a 2D axi-symmetric electrokinetic formulation. The grounding resistance obtained by finite element method is compared with the analytical one for one-layer soil. With the results of this paper it is possible to show that finite element method is a powerful tool in the analysis of the grounding systems in low frequencies. (author)
DEFF Research Database (Denmark)
Carstensen, Josephine Voigt; Jomaas, Grunde; Pankaj, Pankaj
2013-01-01
to extend this approach for RC at elevated temperatures. Prior to the extension, the approach is investigated for associated modeling issues and a set of limits of application are formulated. The available models of the behavior of plain concrete at elevated temperatures were used to derive inherent......One of the accepted approaches for postpeak finite-element modeling of RC comprises combining plain concrete, reinforcement, and interaction behaviors. In these, the postpeak strain-softening behavior of plain concrete is incorporated by the use of fracture energy concepts. This study attempts...... fracture energy variation with temperature. It is found that the currently used tensile elevated temperature model assumes that the fracture energy decays with temperature. The existing models in compression also show significant decay of fracture energy at higher temperatures (>400°) and a considerable...
Modelling of Granular Materials Using the Discrete Element Method
DEFF Research Database (Denmark)
Ullidtz, Per
1997-01-01
With the Discrete Element Method it is possible to model materials that consists of individual particles where a particle may role or slide on other particles. This is interesting because most of the deformation in granular materials is due to rolling or sliding rather that compression of the gra...
Vibrations of turbine blades bundles model with rubber damping elements
Czech Academy of Sciences Publication Activity Database
Půst, Ladislav; Pešek, Luděk
2014-01-01
Roč. 21, č. 1 (2014), s. 45-52 ISSN 1802-1484 R&D Projects: GA ČR GA101/09/1166 Institutional support: RVO:61388998 Keywords : mathematical model * bundle of five blades * rubber damping elements * eigenmodes Subject RIV: BI - Acoustics http://www.engineeringmechanics.cz/obsahy.html?R=21&C=1
Modeling of PHWR fuel elements using FUDA code
International Nuclear Information System (INIS)
Tripathi, Rahul Mani; Soni, Rakesh; Prasad, P.N.; Pandarinathan, P.R.
2008-01-01
The computer code FUDA (Fuel Design Analysis) is used for modeling PHWR fuel bundle operation history and carry out fuel element thermo-mechanical analysis. The radial temperature profile across fuel and sheath, fission gas release, internal gas pressure, sheath stress and strains during the life of fuel bundle are estimated
Model calculations of nuclear data for biologically-important elements
International Nuclear Information System (INIS)
Chadwick, M.B.; Blann, M.; Reffo, G.; Young, P.G.
1994-05-01
We describe calculations of neutron-induced reactions on carbon and oxygen for incident energies up to 70 MeV, the relevant clinical energy in radiation neutron therapy. Our calculations using the FKK-GNASH, GNASH, and ALICE codes are compared with experimental measurements, and their usefulness for modeling reactions on biologically-important elements is assessed
Lower bound plane stress element for modelling 3D structures
DEFF Research Database (Denmark)
Herfelt, Morten Andersen; Poulsen, Peter Noe; Hoang, Linh Cao
2017-01-01
In-plane action is often the primary load-carrying mechanism of reinforced concrete structures. The plate bending action will be secondary, and the behaviour of the structure can be modelled with a reasonable accuracy using a generalised three-dimensional plane stress element. In this paper...
Elasto-viscoplastic finite element model for prestressed concrete structures
International Nuclear Information System (INIS)
Prates Junior, N.P.; Silva, C.S.B.; Campos Filho, A.; Gastal, F.P.S.L.
1995-01-01
This paper presents a computational model, based on the finite element method, for the study of reinforced and prestressed concrete structures under plane stress states. It comprehends short and long-term loading situations, where creep and shrinkage in concrete and steel relaxation are considered. Elasto-viscoplastic constitutive models are used to describe the behavior of the materials. The model includes prestressing and no prestressing reinforcement, on situation with pre- and post-tension with and without bond. A set of prestressed concrete slab elements were tested under instantaneous and long-term loading. The experimental data for deflections, deformations and ultimate strength are used to compare and validate the results obtained through the proposed model. (author). 11 refs., 5 figs
(Environmental and geophysical modeling, fracture mechanics, and boundary element methods)
Energy Technology Data Exchange (ETDEWEB)
Gray, L.J.
1990-11-09
Technical discussions at the various sites visited centered on application of boundary integral methods for environmental modeling, seismic analysis, and computational fracture mechanics in composite and smart'' materials. The traveler also attended the International Association for Boundary Element Methods Conference at Rome, Italy. While many aspects of boundary element theory and applications were discussed in the papers, the dominant topic was the analysis and application of hypersingular equations. This has been the focus of recent work by the author, and thus the conference was highly relevant to research at ORNL.
Vibration tests on some models of PEC reactor core elements
International Nuclear Information System (INIS)
Bonacina, G.; Castoldi, A.; Zola, M.; Cecchini, F.; Martelli, A.; Vincenzi, D.
1982-01-01
This paper describes the aims of the experimental tests carried out at ISMES, within an agreement with the Department of Fast Reactors of ENEA, on some models of the elements of PEC Fast Nuclear Reactor Core in the frame of the activities for the seismic verification of the PEC core. The seismic verification is briefly described with particular attention to the problems arising from the shocks among the various elements during an earthquake, as well as the computer code used, the purpose and the techniques used to perform tests, some results and the first comparison between the theory and the experimental data
Calibration of a finite element composite delamination model by experiments
DEFF Research Database (Denmark)
Gaiotti, M.; Rizzo, C.M.; Branner, Kim
2013-01-01
This paper deals with the mechanical behavior under in plane compressive loading of thick and mostly unidirectional glass fiber composite plates made with an initial embedded delamination. The delamination is rectangular in shape, causing the separation of the central part of the plate into two...... distinct sub-laminates. The work focuses on experimental validation of a finite element model built using the 9-noded MITC9 shell elements, which prevent locking effects and aiming to capture the highly non linear buckling features involved in the problem. The geometry has been numerically defined...
Model order reduction techniques with applications in finite element analysis
Qu, Zu-Qing
2004-01-01
Despite the continued rapid advance in computing speed and memory the increase in the complexity of models used by engineers persists in outpacing them. Even where there is access to the latest hardware, simulations are often extremely computationally intensive and time-consuming when full-blown models are under consideration. The need to reduce the computational cost involved when dealing with high-order/many-degree-of-freedom models can be offset by adroit computation. In this light, model-reduction methods have become a major goal of simulation and modeling research. Model reduction can also ameliorate problems in the correlation of widely used finite-element analyses and test analysis models produced by excessive system complexity. Model Order Reduction Techniques explains and compares such methods focusing mainly on recent work in dynamic condensation techniques: - Compares the effectiveness of static, exact, dynamic, SEREP and iterative-dynamic condensation techniques in producing valid reduced-order mo...
Ruiz-Baier, Ricardo; Lunati, Ivan
2016-10-01
We present a novel discretization scheme tailored to a class of multiphase models that regard the physical system as consisting of multiple interacting continua. In the framework of mixture theory, we consider a general mathematical model that entails solving a system of mass and momentum equations for both the mixture and one of the phases. The model results in a strongly coupled and nonlinear system of partial differential equations that are written in terms of phase and mixture (barycentric) velocities, phase pressure, and saturation. We construct an accurate, robust and reliable hybrid method that combines a mixed finite element discretization of the momentum equations with a primal discontinuous finite volume-element discretization of the mass (or transport) equations. The scheme is devised for unstructured meshes and relies on mixed Brezzi-Douglas-Marini approximations of phase and total velocities, on piecewise constant elements for the approximation of phase or total pressures, as well as on a primal formulation that employs discontinuous finite volume elements defined on a dual diamond mesh to approximate scalar fields of interest (such as volume fraction, total density, saturation, etc.). As the discretization scheme is derived for a general formulation of multicontinuum physical systems, it can be readily applied to a large class of simplified multiphase models; on the other, the approach can be seen as a generalization of these models that are commonly encountered in the literature and employed when the latter are not sufficiently accurate. An extensive set of numerical test cases involving two- and three-dimensional porous media are presented to demonstrate the accuracy of the method (displaying an optimal convergence rate), the physics-preserving properties of the mixed-primal scheme, as well as the robustness of the method (which is successfully used to simulate diverse physical phenomena such as density fingering, Terzaghi's consolidation
A finite element model of ferroelectric/ferroelastic polycrystals
Energy Technology Data Exchange (ETDEWEB)
HWANG,STEPHEN C.; MCMEEKING,ROBERT M.
2000-02-17
A finite element model of polarization switching in a polycrystalline ferroelectric/ferroelastic ceramic is developed. It is assumed that a crystallite switches if the reduction in potential energy of the polycrystal exceeds a critical energy barrier per unit volume of switching material. Each crystallite is represented by a finite element with the possible dipole directions assigned randomly subject to crystallographic constraints. The model accounts for both electric field induced (i.e. ferroelectric) switching and stress induced (i.e. ferroelastic) switching with piezoelectric interactions. Experimentally measured elastic, dielectric, and piezoelectric constants are used consistently, but different effective critical energy barriers are selected phenomenologically. Electric displacement versus electric field, strain versus electric field, stress versus strain, and stress versus electric displacement loops of a ceramic lead lanthanum zirconate titanate (PLZT) are modeled well below the Curie temperature.
Finite element modeling of trolling-mode AFM.
Sajjadi, Mohammadreza; Pishkenari, Hossein Nejat; Vossoughi, Gholamreza
2018-06-01
Trolling mode atomic force microscopy (TR-AFM) has overcome many imaging problems in liquid environments by considerably reducing the liquid-resonator interaction forces. The finite element model of the TR-AFM resonator considering the effects of fluid and nanoneedle flexibility is presented in this research, for the first time. The model is verified by ABAQUS software. The effect of installation angle of the microbeam relative to the horizon and the effect of fluid on the system behavior are investigated. Using the finite element model, frequency response curve of the system is obtained and validated around the frequency of the operating mode by the available experimental results, in air and liquid. The changes in the natural frequencies in the presence of liquid are studied. The effects of tip-sample interaction on the excitation of higher order modes of the system are also investigated in air and liquid environments. Copyright © 2018 Elsevier B.V. All rights reserved.
Energy Technology Data Exchange (ETDEWEB)
Floriani, M.; Grasset, G.; Simon, O.; Morlon, H.; Laroche, L. [CEA Cadarache (DEI/SECRE/LRE), Laboratory of Radioecology and Ecotoxicology, Institute for Radioprotection and Nuclear Safety, 13 - Saint-Paul-lez-Durance (France)
2004-07-01
The global framework of this study is to go further in the understanding of the involved mechanisms of uranium and selenium internalisation at the subcellular level and of their toxicity towards several aquatic and terrestrial organisms. In this context, the applications and performances of a Scanning Transmission Electron Microscope (TEM/STEM) equipped with CCD camera and Energy-Dispersive- X-Ray (EDAX) analysis are reported. The principal merit of this equipment is the clear expression of element distribution with nanometer resolution. The sample for TEM analysis were prepared in ultrathin sections of 70-140 nm (thickness) and those for EDAX in sections of 200-500 nm. This method offers the possibility of a direct correlation between histological image and distribution map of trace elements. For each sample, following TEM analysis, EDAX spectra or EDAX mapping were also recorded to confirm the identity of the electron dense material in the scanned sections. Demonstration of the usefulness of this method to understand the bioaccumulation mechanisms and to study the effect of the pollutant uptake at the subcellular level was performed for target organs of a metal (U) and a metalloid (Se) in various biological models: a higher rooted plant (Phaseolus vulgaris)) and a freshwater invertebrate (Orconectes Limosus) and a unicellular green alga (Chlamydomonas reinhardtii)). TEM-EDAX analysis revealed the presence of U-deposits in gills and digestive gland in crayfish, and in vacuoles or in the cytoplasm of different rooted cells bean. In the alga, the accumulation of Se was found in electron-dense granules within cytoplasm associated with ultrastructural changes and starch accumulation. (author)
International Nuclear Information System (INIS)
Floriani, M.; Grasset, G.; Simon, O.; Morlon, H.; Laroche, L.
2004-01-01
The global framework of this study is to go further in the understanding of the involved mechanisms of uranium and selenium internalisation at the subcellular level and of their toxicity towards several aquatic and terrestrial organisms. In this context, the applications and performances of a Scanning Transmission Electron Microscope (TEM/STEM) equipped with CCD camera and Energy-Dispersive- X-Ray (EDAX) analysis are reported. The principal merit of this equipment is the clear expression of element distribution with nanometer resolution. The sample for TEM analysis were prepared in ultrathin sections of 70-140 nm (thickness) and those for EDAX in sections of 200-500 nm. This method offers the possibility of a direct correlation between histological image and distribution map of trace elements. For each sample, following TEM analysis, EDAX spectra or EDAX mapping were also recorded to confirm the identity of the electron dense material in the scanned sections. Demonstration of the usefulness of this method to understand the bioaccumulation mechanisms and to study the effect of the pollutant uptake at the subcellular level was performed for target organs of a metal (U) and a metalloid (Se) in various biological models: a higher rooted plant (Phaseolus vulgaris)) and a freshwater invertebrate (Orconectes Limosus) and a unicellular green alga (Chlamydomonas reinhardtii)). TEM-EDAX analysis revealed the presence of U-deposits in gills and digestive gland in crayfish, and in vacuoles or in the cytoplasm of different rooted cells bean. In the alga, the accumulation of Se was found in electron-dense granules within cytoplasm associated with ultrastructural changes and starch accumulation. (author)
Local Refinement of the Super Element Model of Oil Reservoir
Directory of Open Access Journals (Sweden)
A.B. Mazo
2017-12-01
Full Text Available In this paper, we propose a two-stage method for petroleum reservoir simulation. The method uses two models with different degrees of detailing to describe hydrodynamic processes of different space-time scales. At the first stage, the global dynamics of the energy state of the deposit and reserves is modeled (characteristic scale of such changes is km / year. The two-phase flow equations in the model of global dynamics operate with smooth averaged pressure and saturation fields, and they are solved numerically on a large computational grid of super-elements with a characteristic cell size of 200-500 m. The tensor coefficients of the super-element model are calculated using special procedures of upscaling of absolute and relative phase permeabilities. At the second stage, a local refinement of the super-element model is constructed for calculating small-scale processes (with a scale of m / day, which take place, for example, during various geological and technical measures aimed at increasing the oil recovery of a reservoir. Then we solve the two-phase flow problem in the selected area of the measure exposure on a detailed three-dimensional grid, which resolves the geological structure of the reservoir, and with a time step sufficient for describing fast-flowing processes. The initial and boundary conditions of the local problem are formulated on the basis of the super-element solution. This approach allows us to reduce the computational costs in order to solve the problems of designing and monitoring the oil reservoir. To demonstrate the proposed approach, we give an example of the two-stage modeling of the development of a layered reservoir with a local refinement of the model during the isolation of a water-saturated high-permeability interlayer. We show a good compliance between the locally refined solution of the super-element model in the area of measure exposure and the results of numerical modeling of the whole history of reservoir
Directory of Open Access Journals (Sweden)
Eils Roland
2006-06-01
Full Text Available Abstract Background The subcellular location of a protein is closely related to its function. It would be worthwhile to develop a method to predict the subcellular location for a given protein when only the amino acid sequence of the protein is known. Although many efforts have been made to predict subcellular location from sequence information only, there is the need for further research to improve the accuracy of prediction. Results A novel method called HensBC is introduced to predict protein subcellular location. HensBC is a recursive algorithm which constructs a hierarchical ensemble of classifiers. The classifiers used are Bayesian classifiers based on Markov chain models. We tested our method on six various datasets; among them are Gram-negative bacteria dataset, data for discriminating outer membrane proteins and apoptosis proteins dataset. We observed that our method can predict the subcellular location with high accuracy. Another advantage of the proposed method is that it can improve the accuracy of the prediction of some classes with few sequences in training and is therefore useful for datasets with imbalanced distribution of classes. Conclusion This study introduces an algorithm which uses only the primary sequence of a protein to predict its subcellular location. The proposed recursive scheme represents an interesting methodology for learning and combining classifiers. The method is computationally efficient and competitive with the previously reported approaches in terms of prediction accuracies as empirical results indicate. The code for the software is available upon request.
On the finite element modeling of the asymmetric cracked rotor
AL-Shudeifat, Mohammad A.
2013-05-01
The advanced phase of the breathing crack in the heavy duty horizontal rotor system is expected to be dominated by the open crack state rather than the breathing state after a short period of operation. The reason for this scenario is the expected plastic deformation in crack location due to a large compression stress field appears during the continuous shaft rotation. Based on that, the finite element modeling of a cracked rotor system with a transverse open crack is addressed here. The cracked rotor with the open crack model behaves as an asymmetric shaft due to the presence of the transverse edge crack. Hence, the time-varying area moments of inertia of the cracked section are employed in formulating the periodic finite element stiffness matrix which yields a linear time-periodic system. The harmonic balance method (HB) is used for solving the finite element (FE) equations of motion for studying the dynamic behavior of the system. The behavior of the whirl orbits during the passage through the subcritical rotational speeds of the open crack model is compared to that for the breathing crack model. The presence of the open crack with the unbalance force was found only to excite the 1/2 and 1/3 of the backward critical whirling speed. The whirl orbits in the neighborhood of these subcritical speeds were found to have nearly similar behavior for both open and breathing crack models. While unlike the breathing crack model, the subcritical forward whirling speeds have not been observed for the open crack model in the response to the unbalance force. As a result, the behavior of the whirl orbits during the passage through the forward subcritical rotational speeds is found to be enough to distinguish the breathing crack from the open crack model. These whirl orbits with inner loops that appear in the neighborhood of the forward subcritical speeds are then a unique property for the breathing crack model.
2D Finite Element Model of a CIGS Module
Energy Technology Data Exchange (ETDEWEB)
Janssen, G.J.M.; Slooff, L.H.; Bende, E.E. [ECN Solar Energy, P.O.Box 1, NL-1755 ZG Petten (Netherlands)
2012-06-15
The performance of thin-film CIGS (Copper indium gallium selenide) modules is often limited due to inhomogeneities in CIGS layers. A 2-dimensional Finite Element Model for CIGS modules is presented that predicts the impact of such inhomogeneities on the module performance. Results are presented of a module with a region of poor diode characteristics. It is concluded that according to this model the effects of poor diodes depend strongly on their location in the module and on their dispersion over the module surface. Due to its generic character the model can also be applied to other series connections of photovoltaic cells.
2D - Finite element model of a CIGS module
Energy Technology Data Exchange (ETDEWEB)
Janssen, G.J.M.; Slooff, L.H.; Bende, E.E. [ECN Solar Energy, Petten (Netherlands)
2012-09-15
The performance of thin-film CIGS modules is often limited due to inhomogeneities in CIGS layers. A 2-dimensional Finite Element Model for CIGS modules is demonstrated that predicts the impact of such inhomogeneities on the module performance. Results are presented of a module with a region of poor diode characteristics. It is concluded that according to this model the effects of poor diodes depend strongly on their location in the module and on their dispersion over the module surface. Due to its generic character the model can also be applied to other series connections of photovoltaic cells.
Finite element modeling of TFTR poloidal field coils
International Nuclear Information System (INIS)
Baumgartner, J.A.; O'Toole, J.A.
1986-01-01
The Tokamak Fusion Test Reactor (TFTR) Poloidal Field (PF) coils were originally analyzed to TFTR design conditions. The coils have been reanalyzed by PPPL and Grumman to determine operating limits under as-built conditions. Critical stress levels, based upon data obtained from the reanalysis of each PF coil, are needed for input to the TFTR simulation code algorithms. The primary objective regarding structural integrity has been to ascertain the magnitude and location of critical internal stresses in each PF coil due to various combinations of electromagnetic and thermally induced loads. For each PF coil, a global finite element model (FEM) of a coil sector is being analyzed to obtain the basic coil internal loads and displacements. Subsequent fine mesh local models of the coil lead stem and lead spur regions produce the magnitudes and locations of peak stresses. Each copper turn and its surrounding insulation are modeled using solid finite elements. The corresponding electromagnetic and thermal analyses are similarly modeled. A series of test beams were developed to determine the best combination of MSC/NASTRAN-type finite elements for use in PF coil analysis. The results of this analysis compare favorably with those obtained by the earlier analysis which was limited in scope
Modeling of the condyle elements within a biomechanical knee model
DEFF Research Database (Denmark)
Ribeiro, Ana; Rasmussen, John; Flores, Paulo
2012-01-01
The development of a computational multibody knee model able to capture some of the fundamental properties of the human knee articulation is presented. This desideratum is reached by including the kinetics of the real knee articulation. The research question is whether an accurate modeling of the...
Elements of a collaborative systems model within the aerospace industry
Westphalen, Bailee R.
2000-10-01
Scope and method of study. The purpose of this study was to determine the components of current aerospace collaborative efforts. There were 44 participants from two selected groups surveyed for this study. Nineteen were from the Oklahoma Air National Guard based in Oklahoma City representing the aviation group. Twenty-five participants were from the NASA Johnson Space Center in Houston representing the aerospace group. The surveys for the aviation group were completed in reference to planning missions necessary to their operations. The surveys for the aerospace group were completed in reference to a well-defined and focused goal from a current mission. A questionnaire was developed to survey active participants of collaborative systems in order to consider various components found within the literature. Results were analyzed and aggregated through a database along with content analysis of open-ended question comments from respondents. Findings and conclusions. This study found and determined elements of a collaborative systems model in the aerospace industry. The elements were (1) purpose or mission for the group or team; (2) commitment or dedication to the challenge; (3) group or team meetings and discussions; (4) constraints of deadlines and budgets; (5) tools and resources for project and simulations; (6) significant contributors to the collaboration; (7) decision-making formats; (8) reviews of project; (9) participants education and employment longevity; (10) cross functionality of team or group members; (11) training on the job plus teambuilding; (12) other key elements identified relevant by the respondents but not included in the model such as communication and teamwork; (13) individual and group accountability; (14) conflict, learning, and performance; along with (15) intraorganizational coordination. These elements supported and allowed multiple individuals working together to solve a common problem or to develop innovation that could not have been
Finite element analysis of three dimensional crack growth by the use of a boundary element sub model
DEFF Research Database (Denmark)
Lucht, Tore
2009-01-01
A new automated method to model non-planar three dimensional crack growth is proposed which combines the advantages of both the boundary element method and the finite element method. The proposed method links the two methods by a submodelling strategy in which the solution of a global finite...... element model containing an approximation of the crack is interpolated to a much smaller boundary element model containing a fine discretization of the real crack. The method is validated through several numerical comparisons and by comparison to crack growth measured in a test specimen for an engineering...
A vortex model for Darrieus turbine using finite element techniques
Energy Technology Data Exchange (ETDEWEB)
Ponta, Fernando L. [Universidad de Buenos Aires, Dept. de Electrotecnia, Grupo ISEP, Buenos Aires (Argentina); Jacovkis, Pablo M. [Universidad de Buenos Aires, Dept. de Computacion and Inst. de Calculo, Buenos Aires (Argentina)
2001-09-01
Since 1970 several aerodynamic prediction models have been formulated for the Darrieus turbine. We can identify two families of models: stream-tube and vortex. The former needs much less computation time but the latter is more accurate. The purpose of this paper is to show a new option for modelling the aerodynamic behaviour of Darrieus turbines. The idea is to combine a classic free vortex model with a finite element analysis of the flow in the surroundings of the blades. This avoids some of the remaining deficiencies in classic vortex models. The agreement between analysis and experiment when predicting instantaneous blade forces and near wake flow behind the rotor is better than the one obtained in previous models. (Author)
Critical elements on fitting the Bayesian multivariate Poisson Lognormal model
Zamzuri, Zamira Hasanah binti
2015-10-01
Motivated by a problem on fitting multivariate models to traffic accident data, a detailed discussion of the Multivariate Poisson Lognormal (MPL) model is presented. This paper reveals three critical elements on fitting the MPL model: the setting of initial estimates, hyperparameters and tuning parameters. These issues have not been highlighted in the literature. Based on simulation studies conducted, we have shown that to use the Univariate Poisson Model (UPM) estimates as starting values, at least 20,000 iterations are needed to obtain reliable final estimates. We also illustrated the sensitivity of the specific hyperparameter, which if it is not given extra attention, may affect the final estimates. The last issue is regarding the tuning parameters where they depend on the acceptance rate. Finally, a heuristic algorithm to fit the MPL model is presented. This acts as a guide to ensure that the model works satisfactorily given any data set.
Isotope and trace element models of crustal evolution
International Nuclear Information System (INIS)
O'Nions, R.K.; Hamilton, P.J.
1981-01-01
Some of the isotopic constraints on the development of continental crust from about 3.8 Ga ago are reviewed. Particularly it is noted that Archaean granitic (sensu lato) rocks have initial 143 Nd/ 144 Nd ratios close to predicted values for the bulk Earth at the time before emplacement, whereas those Phanerozoic granites investigated so far diverge considerably from the bulk Earth and betray the existence of later continental crust in their provenance. Geochemical evidence for recycling of some continent-derived elements into the mantle is examined and the important distinction between selected element recycling and bulk return of continental material is emphasized. Various transport models that have been proposed to model the development of continental crust are examined and some of their differences and similarities, particularly with respect to implications for continental recycling, are highlighted. (author)
Finite element modeling of micromachined MEMS photon devices
Evans, Boyd M., III; Schonberger, D. W.; Datskos, Panos G.
1999-09-01
The technology of microelectronics that has evolved over the past half century is one of great power and sophistication and can now be extended to many applications (MEMS and MOEMS) other than electronics. An interesting application of MEMS quantum devices is the detection of electromagnetic radiation. The operation principle of MEMS quantum devices is based on the photoinduced stress in semiconductors, and the photon detection results from the measurement of the photoinduced bending. These devices can be described as micromechanical photon detectors. In this work, we have developed a technique for simulating electronic stresses using finite element analysis. We have used our technique to model the response of micromechanical photon devices to external stimuli and compared these results with experimental data. Material properties, geometry, and bimaterial design play an important role in the performance of micromechanical photon detectors. We have modeled these effects using finite element analysis and included the effects of bimaterial thickness coating, effective length of the device, width, and thickness.
Finite Element Modeling of Micromachined MEMS Photon Devices
International Nuclear Information System (INIS)
Datskos, P.G.; Evans, B.M.; Schonberger, D.
1999-01-01
The technology of microelectronics that has evolved over the past half century is one of great power and sophistication and can now be extended to many applications (MEMS and MOEMS) other than electronics. An interesting application of MEMS quantum devices is the detection of electromagnetic radiation. The operation principle of MEMS quantum devices is based on the photoinduced stress in semiconductors, and the photon detection results from the measurement of the photoinduced bending. These devices can be described as micromechanical photon detectors. In this work, we have developed a technique for simulating electronic stresses using finite element analysis. We have used our technique to model the response of micromechanical photon devices to external stimuli and compared these results with experimental data. Material properties, geometry, and bimaterial design play an important role in the performance of micromechanical photon detectors. We have modeled these effects using finite element analysis and included the effects of bimaterial thickness coating, effective length of the device, width, and thickness
Finite element approximation to a model problem of transonic flow
International Nuclear Information System (INIS)
Tangmanee, S.
1986-12-01
A model problem of transonic flow ''the Tricomi equation'' in Ω is contained in IR 2 bounded by the rectangular-curve boundary is posed in the form of symmetric positive differential equations. The finite element method is then applied. When the triangulation of Ω-bar is made of quadrilaterals and the approximation space is the Lagrange polynomial, we get the error estimates. 14 refs, 1 fig
Development of a finite element model of decompressive craniectomy.
Directory of Open Access Journals (Sweden)
Tim L Fletcher
Full Text Available Decompressive craniectomy (DC, an operation whereby part of the skull is removed, is used in the management of patients with brain swelling. While the aim of DC is to reduce intracranial pressure, there is the risk that brain deformation and mechanical strain associated with the operation could damage the brain tissue. The nature and extent of the resulting strain regime is poorly understood at present. Finite element (FE models of DC can provide insight into this applied strain and hence assist in deciding on the best surgical procedures. However there is uncertainty about how well these models match experimental data, which are difficult to obtain clinically. Hence there is a need to validate any modelling approach outside the clinical setting. This paper develops an axisymmetric FE model of an idealised DC to assess the key features of such an FE model which are needed for an accurate simulation of DC. The FE models are compared with an experimental model using gelatin hydrogel, which has similar poro-viscoelastic material property characteristics to brain tissue. Strain on a central plane of the FE model and the front face of the experimental model, deformation and load relaxation curves are compared between experiment and FE. Results show good agreement between the FE and experimental models, providing confidence in applying the proposed FE modelling approach to DC. Such a model should use material properties appropriate for brain tissue and include a more realistic whole head geometry.
Hydrogeological Properties of Geological Elements in Geological Model around KURT
Energy Technology Data Exchange (ETDEWEB)
Park, Kyung Woo; Kim, Kyung Soo; Koh, Yong Kwon; Choi, Jong Won [Korea Atomic Energy Institue, Daejeon (Korea, Republic of)
2012-09-15
To develop site characterization technologies for a radioactive waste disposal research in KAERI, the geological and hydrogeological investigations have been carried out since 1997. In 2006, the KURT (KAERI Underground Research Tunnel) was constructed to study a solute migration, a microbiology and an engineered barrier system as well as deeply to understand geological environments in in-situ condition. This study is performed as one of the site characterization works around KURT. Several investigations such as a lineament analysis, a borehole/tunnel survey, a geophyscial survey and logging in borehole, were used to construct the geological model. As a result, the geological model is constructed, which includes the lithological model and geo-structural model in this study. Moreover, from the results of the in-situ hydraulic tests, the hydrogeological properties of elements in geological model were evaluated.
Modelling of Rotational Capacity in Reinforced Linear Elements
DEFF Research Database (Denmark)
Hestbech, Lars; Hagsten, Lars German; Fisker, Jakob
2011-01-01
on the rotational capacity of the plastic hinges. The documentation of ductility can be a difficult task as modelling of rotational capacity in plastic hinges of frames is not fully developed. On the basis of the Theory of Plasticity a model is developed to determine rotational capacity in plastic hinges in linear......The Capacity Design Method forms the basis of several seismic design codes. This design philosophy allows plastic deformations in order to decrease seismic demands in structures. However, these plastic deformations must be localized in certain zones where ductility requirements can be documented...... reinforced concrete elements. The model is taking several important parameters into account. Empirical values is avoided which is considered an advantage compared to previous models. Furthermore, the model includes force variations in the reinforcement due to moment distributions and shear as well...
Hydrogeological Properties of Geological Elements in Geological Model around KURT
International Nuclear Information System (INIS)
Park, Kyung Woo; Kim, Kyung Soo; Koh, Yong Kwon; Choi, Jong Won
2012-01-01
To develop site characterization technologies for a radioactive waste disposal research in KAERI, the geological and hydrogeological investigations have been carried out since 1997. In 2006, the KURT (KAERI Underground Research Tunnel) was constructed to study a solute migration, a microbiology and an engineered barrier system as well as deeply to understand geological environments in in-situ condition. This study is performed as one of the site characterization works around KURT. Several investigations such as a lineament analysis, a borehole/tunnel survey, a geophyscial survey and logging in borehole, were used to construct the geological model. As a result, the geological model is constructed, which includes the lithological model and geo-structural model in this study. Moreover, from the results of the in-situ hydraulic tests, the hydrogeological properties of elements in geological model were evaluated.
Hindle, D.; Malz, A.; Donndorf, S.; Kley, J.; Kopp, H.
2012-04-01
We develop a coupled numerical model for fluid flow in deforming sedimentary basins. We combine a distinct element method for large deformations of crustal materials, with a finite element method for fluid flow according to a diffusion type equation. The key question in such a model is how to simulate evolving permeabilities due to upper and possibly middle crustal deformation, and the coupled issue of how localisation of deformation in faults and shear zones is itself influenced by fluid flow and fluid pressure and vice versa. Currently our knowledge of these issues is restricted, even sketchy. There are a number of hypotheses, based partly on geological and isotope geochemical observations, such as "seismic pumping" models, and fluid induced weak décollement models for thrust sheet transport which have gained quite wide acceptance. Observations around thrusts at the present day have also often been interpreted as showing deformation induced permeability. However, combining all the physics of these processes into a numerical simulation is a complicated task given the ranges of, in particular time scales of the processes we infer to be operating based on our various observations. We start this task by using an elastic fracture relationship between normal stresses across distinct element contacts (which we consider to be the equivalent of discrete, sliding fractures) and their openness and hence their transmissivity. This relates the mechanical state of the distinct element system to a discrete permeability field. Further than that, the geometry of the mechanical system is used to provide boundary conditions for fluid flow in a diffusion equation which also incorporates the permeability field. The next question we address is how to achieve a feedback between fluid pressures and deformation. We try two approaches: one treats pore space in the DEM as real, and calculates the force exerted locally by fluids and adds this to the force balance of the model; another
Quantitative Modelling of Trace Elements in Hard Coal.
Smoliński, Adam; Howaniec, Natalia
2016-01-01
The significance of coal in the world economy remains unquestionable for decades. It is also expected to be the dominant fossil fuel in the foreseeable future. The increased awareness of sustainable development reflected in the relevant regulations implies, however, the need for the development and implementation of clean coal technologies on the one hand, and adequate analytical tools on the other. The paper presents the application of the quantitative Partial Least Squares method in modeling the concentrations of trace elements (As, Ba, Cd, Co, Cr, Cu, Mn, Ni, Pb, Rb, Sr, V and Zn) in hard coal based on the physical and chemical parameters of coal, and coal ash components. The study was focused on trace elements potentially hazardous to the environment when emitted from coal processing systems. The studied data included 24 parameters determined for 132 coal samples provided by 17 coal mines of the Upper Silesian Coal Basin, Poland. Since the data set contained outliers, the construction of robust Partial Least Squares models for contaminated data set and the correct identification of outlying objects based on the robust scales were required. These enabled the development of the correct Partial Least Squares models, characterized by good fit and prediction abilities. The root mean square error was below 10% for all except for one the final Partial Least Squares models constructed, and the prediction error (root mean square error of cross-validation) exceeded 10% only for three models constructed. The study is of both cognitive and applicative importance. It presents the unique application of the chemometric methods of data exploration in modeling the content of trace elements in coal. In this way it contributes to the development of useful tools of coal quality assessment.
Subcellular localization of cadmium in hyperaccumulator Populus ...
African Journals Online (AJOL)
In this study, subcellular localization of cadmium in hyperaccumulator grey poplar (Populus × canescens) was investigated by the transmission electron microscopy (TEM) method. Young Populus × canescens were grown and hydroponic experiments were conducted under four Cd2+ concentrations (10, 30, 50, and 70 μM) ...
Subcellular sites for bacterial protein export
Campo, Nathalie; Tjalsma, Harold; Buist, Girbe; Stepniak, Dariusz; Meijer, Michel; Veenhuis, Marten; Westermann, Martin; Müller, Jörg P.; Bron, Sierd; Kok, Jan; Kuipers, Oscar P.; Jongbloed, Jan D.H.
2004-01-01
Most bacterial proteins destined to leave the cytoplasm are exported to extracellular compartments or imported into the cytoplasmic membrane via the highly conserved SecA-YEG pathway. In the present studies, the subcellular distributions of core components of this pathway, SecA and SecY, and of the
Subcellular sites for bacterial protein export.
Campo, N.; Tjalsma, H.; Buist, G.; Stepniak, D.; Meijer, M.; Veenhuis, M.; Westermann, M.; Muller, J.P.; Bron, S.; Kok, J.; Kuipers, O.P.; Jongbloed, J.D.
2004-01-01
Most bacterial proteins destined to leave the cytoplasm are exported to extracellular compartments or imported into the cytoplasmic membrane via the highly conserved SecA-YEG pathway. In the present studies, the subcellular distributions of core components of this pathway, SecA and SecY, and of the
Expression and subcellular localization of antiporter regulating ...
African Journals Online (AJOL)
We examined the expression and subcellular localization of antiporter regulating protein OsARP in a submergence tolerant rice (Oryza sativa L.) cultivar FR13A. In the public databases, this protein was designated as putative Os02g0465900 protein. The cDNA containing the full-length sequence of OsARP gene was ...
Development of a finite element model of the human abdomen.
Lee, J B; Yang, K H
2001-11-01
Currently, three-dimensional finite element models of the human body have been developed for frequently injured anatomical regions such as the brain, chest, extremities and pelvis. While a few models of the human body include the abdomen, these models have tended to oversimplify the complexity of the abdominal region. As the first step in understanding abdominal injuries via numerical methods, a 3D finite element model of a 50(th) percentile male human abdomen (WSUHAM) has been developed and validated against experimental data obtained from two sets of side impact tests and a series of frontal impact tests. The model includes a detailed representation of the liver, spleen, kidneys, spine, skin and major blood vessels. Hollow organs, such as the esophagus, stomach, small and large intestines, gallbladder, bile ducts, ureters, rectum and adrenal glands are grouped into three bodybags in order to provide realistic inertial properties and to maintain the position of the solid organs in their appropriate locations. Using direct connections, the model was joined superiorly to a partial model of the human thorax, and inferiorly to models of the human pelvis and the lower extremities that have been previously developed. Material properties for various tissues of the abdomen were derived from the literature. Data obtained in a series of cadaveric pendulum impact tests conducted at Wayne State University (WSU), a series of lateral drop tests conducted at Association Peugeot-Renault (APR) and a series of cadaveric lower abdomen frontal impact tests conducted at WSU were used to validate the model. Results predicted by the model match these experimental data for various impact speeds, impactor masses and drop heights. Further study is still needed in order to fully validate WSUHAM before it can be used to assess various impact loading conditions associated with vehicular crashes.
Finite element modeling of ultrasonic inspection of weldments
International Nuclear Information System (INIS)
Dewey, B.R.; Adler, L.; Oliver, B.F.; Pickard, C.A.
1983-01-01
High performance weldments for critical service applications require 100% inspection. Balanced against the adaptability of the ultrasonic method for automated inspection are the difficulties encountered with nonhomogeneous and anisotropic materials. This research utilizes crystals and bicrystals of nickel to model austenitic weld metal, where the anisotropy produces scattering and mode conversion, making detection and measurement of actual defects difficult. Well characterized samples of Ni are produced in a levitation zone melting facility. Crystals in excess of 25 mm diameter and length are large enough to permit ultrasonic measurements of attenuation, wave speed, and spectral content. At the same time, the experiments are duplicated as finite element models for comparison purposes
Finite element modeling and experimentation of bone drilling forces
International Nuclear Information System (INIS)
Lughmani, W A; Bouazza-Marouf, K; Ashcroft, I
2013-01-01
Bone drilling is an essential part of many orthopaedic surgery procedures, including those for internal fixation and for attaching prosthetics. Estimation and control of bone drilling forces are critical to prevent drill breakthrough, excessive heat generation, and mechanical damage to the bone. This paper presents a 3D finite element (FE) model for prediction of thrust forces experienced during bone drilling. The model incorporates the dynamic characteristics involved in the process along with the accurate geometrical considerations. The average critical thrust forces and torques obtained using FE analysis, for set of machining parameters are found to be in good agreement with the experimental results
Finite Element Approximation of the FENE-P Model
Barrett , John ,; Boyaval , Sébastien
2017-01-01
We extend our analysis on the Oldroyd-B model in Barrett and Boyaval [1] to consider the finite element approximation of the FENE-P system of equations, which models a dilute polymeric fluid, in a bounded domain $D $\\subset$ R d , d = 2 or 3$, subject to no flow boundary conditions. Our schemes are based on approximating the pressure and the symmetric conforma-tion tensor by either (a) piecewise constants or (b) continuous piecewise linears. In case (a) the velocity field is approximated by c...
Finite element and analytical models for twisted and coiled actuator
Tang, Xintian; Liu, Yingxiang; Li, Kai; Chen, Weishan; Zhao, Jianguo
2018-01-01
Twisted and coiled actuator (TCA) is a class of recently discovered artificial muscle, which is usually made by twisting and coiling polymer fibers into spring-like structures. It has been widely studied since discovery due to its impressive output characteristics and bright prospects. However, its mathematical models describing the actuation in response to the temperature are still not fully developed. It is known that the large tensile stroke is resulted from the untwisting of the twisted fiber when heated. Thus, the recovered torque during untwisting is a key parameter in the mathematical model. This paper presents a simplified model for the recovered torque of TCA. Finite element method is used for evaluating the thermal stress of the twisted fiber. Based on the results of the finite element analyses, the constitutive equations of twisted fibers are simplified to develop an analytic model of the recovered torque. Finally, the model of the recovered torque is used to predict the deformation of TCA under varying temperatures and validated against experimental results. This work will enhance our understanding of the deformation mechanism of TCAs, which will pave the way for the closed-loop position control.
Sub-cellular force microscopy in single normal and cancer cells.
Babahosseini, H; Carmichael, B; Strobl, J S; Mahmoodi, S N; Agah, M
2015-08-07
This work investigates the biomechanical properties of sub-cellular structures of breast cells using atomic force microscopy (AFM). The cells are modeled as a triple-layered structure where the Generalized Maxwell model is applied to experimental data from AFM stress-relaxation tests to extract the elastic modulus, the apparent viscosity, and the relaxation time of sub-cellular structures. The triple-layered modeling results allow for determination and comparison of the biomechanical properties of the three major sub-cellular structures between normal and cancerous cells: the up plasma membrane/actin cortex, the mid cytoplasm/nucleus, and the low nuclear/integrin sub-domains. The results reveal that the sub-domains become stiffer and significantly more viscous with depth, regardless of cell type. In addition, there is a decreasing trend in the average elastic modulus and apparent viscosity of the all corresponding sub-cellular structures from normal to cancerous cells, which becomes most remarkable in the deeper sub-domain. The presented modeling in this work constitutes a unique AFM-based experimental framework to study the biomechanics of sub-cellular structures. Copyright © 2015 Elsevier Inc. All rights reserved.
Material Models for the Human Torso Finite Element Model
2018-04-04
44-mm standard for body armors required ballistic tests of armor backed by Roma Plastilina clay . The scope has expanded to include hard armors as...conditions were not fully considered, and that the connections between the clay -backed deflections and goat lethality were preliminary results... viscosity component needed to represent organic tissue in the Mat77 material model. Material characterizations from the published literature were drawn
Induction Heating Model of Cermet Fuel Element Environmental Test (CFEET)
Gomez, Carlos F.; Bradley, D. E.; Cavender, D. P.; Mireles, O. R.; Hickman, R. R.; Trent, D.; Stewart, E.
2013-01-01
Deep space missions with large payloads require high specific impulse and relatively high thrust to achieve mission goals in reasonable time frames. Nuclear Thermal Rockets (NTR) are capable of producing a high specific impulse by employing heat produced by a fission reactor to heat and therefore accelerate hydrogen through a rocket nozzle providing thrust. Fuel element temperatures are very high (up to 3000 K) and hydrogen is highly reactive with most materials at high temperatures. Data covering the effects of high-temperature hydrogen exposure on fuel elements are limited. The primary concern is the mechanical failure of fuel elements due to large thermal gradients; therefore, high-melting-point ceramics-metallic matrix composites (cermets) are one of the fuels under consideration as part of the Nuclear Cryogenic Propulsion Stage (NCPS) Advance Exploration System (AES) technology project at the Marshall Space Flight Center. The purpose of testing and analytical modeling is to determine their ability to survive and maintain thermal performance in a prototypical NTR reactor environment of exposure to hydrogen at very high temperatures and obtain data to assess the properties of the non-nuclear support materials. The fission process and the resulting heating performance are well known and do not require that active fissile material to be integrated in this testing. A small-scale test bed; Compact Fuel Element Environmental Tester (CFEET), designed to heat fuel element samples via induction heating and expose samples to hydrogen is being developed at MSFC to assist in optimal material and manufacturing process selection without utilizing fissile material. This paper details the analytical approach to help design and optimize the test bed using COMSOL Multiphysics for predicting thermal gradients induced by electromagnetic heating (Induction heating) and Thermal Desktop for radiation calculations.
International Nuclear Information System (INIS)
Ishida, Hitoshi; Meshii, Toshiyuki
2010-01-01
This study proposes an element size selection method named the 'Impact-Meshing (IM) method' for a finite element waves propagation analysis model, which is characterized by (1) determination of element division of the model with strain energy in the whole model, (2) static analysis (dynamic analysis in a single time step) with boundary conditions which gives a maximum change of displacement in the time increment and inertial (impact) force caused by the displacement change. In this paper, an example of application of the IM method to 3D ultrasonic wave propagation problem in an elastic solid is described. These examples showed an analysis result with a model determined by the IM method was convergence and calculation time for determination of element subdivision was reduced to about 1/6 by the IM Method which did not need determination of element subdivision by a dynamic transient analysis with 100 time steps. (author)
Finite element modeling of Balsa wood structures under severe loadings
International Nuclear Information System (INIS)
Toson, B.; Pesque, J.J.; Viot, P.
2014-01-01
In order to compute, in various situations, the requirements for transporting packages using Balsa wood as an energy absorber, a constitutive model is needed that takes into account all of the specific characteristics of the wood, such as its anisotropy, compressibility, softening, densification, and strain rate dependence. Such a model must also include the treatment of rupture of the wood when it is in traction. The complete description of wood behavior is not sufficient: robustness is also necessary because this model has to work in presence of large deformations and of many other external nonlinear phenomena in the surrounding structures. We propose such a constitutive model that we have developed using the commercial finite element package ABAQUS. The necessary data were acquired through an extensive compilation of the existing literature with the augmentation of personal measurements. Numerous validation tests are presented that represent different impact situations that a transportation cask might endure. (authors)
OXYGEN PRESSURE REGULATOR DESIGN AND ANALYSIS THROUGH FINITE ELEMENT MODELING
Directory of Open Access Journals (Sweden)
Asterios KOSMARAS
2017-05-01
Full Text Available Oxygen production centers produce oxygen in high pressure that needs to be defused. A regulator is designed and analyzed in the current paper for medical use in oxygen production centers. This study aims to design a new oxygen pressure regulator and perform an analysis using Finite Element Modeling in order to evaluate its working principle. In the design procedure,the main elements and the operating principles of a pressure regulator are taking into account. The regulator is designed and simulations take place in order to assessthe proposed design. Stress analysis results are presented for the main body of the regulator, as well as, flow analysis to determine some important flow characteristics in the inlet and outlet of the regulator.
Finite element modelling and analysis of composites toecaps
International Nuclear Information System (INIS)
Yang, C C; Duhovic, M; Lin, R J T; Bhattacharyya, D
2009-01-01
Composite toe-caps have attracted considerable attention due to their advantageous properties over traditional metallic toe-caps. However, the anisotropic properties of composite materials also make the toe-cap performance more complex to analyse. This project aims at developing a Finite Element (FE) model for composite toe-caps with the aid of compression testing data. The geometry of the toe-cap was first scanned and imported into an FEA software package to create a workable FE model. The method was then validated by comparing the FE model with experimental results of steel toe-caps. Manufacturing, modelling and testing of custom-made composite toe-cap samples were then carried out. Modelling outputs of composite toe-caps were compared with compression test data for validation. The stress distributions and deformations of the toe-caps were also analysed. Modelling of the steel and composite toe-caps was realized using LS-DYNA Solver and PrePost (registered) . All FE analyses were modelled with reference to European Standards. The developed FE models can in the future be used to model toe-caps with various materials to determine the effects of fibre orientation relating to structural strength, and to achieve structural optimisation.
Lower extremity finite element model for crash simulation
Energy Technology Data Exchange (ETDEWEB)
Schauer, D.A.; Perfect, S.A.
1996-03-01
A lower extremity model has been developed to study occupant injury mechanisms of the major bones and ligamentous soft tissues resulting from vehicle collisions. The model is based on anatomically correct digitized bone surfaces of the pelvis, femur, patella and the tibia. Many muscles, tendons and ligaments were incrementally added to the basic bone model. We have simulated two types of occupant loading that occur in a crash environment using a non-linear large deformation finite element code. The modeling approach assumed that the leg was passive during its response to the excitation, that is, no active muscular contraction and therefore no active change in limb stiffness. The approach recognized that the most important contributions of the muscles to the lower extremity response are their ability to define and modify the impedance of the limb. When nonlinear material behavior in a component of the leg model was deemed important to response, a nonlinear constitutive model was incorporated. The accuracy of these assumptions can be verified only through a review of analysis results and careful comparison with test data. As currently defined, the model meets the objective for which it was created. Much work remains to be done, both from modeling and analysis perspectives, before the model can be considered complete. The model implements a modeling philosophy that can accurately capture both kinematic and kinetic response of the lower limb. We have demonstrated that the lower extremity model is a valuable tool for understanding the injury processes and mechanisms. We are now in a position to extend the computer simulation to investigate the clinical fracture patterns observed in actual crashes. Additional experience with this model will enable us to make a statement on what measures are needed to significantly reduce lower extremity injuries in vehicle crashes. 6 refs.
田中, 英一; TANAKA, Eiichi; 山本, 創太; YAMAMOTO, Sota; 坂本, 誠二; SAKAMOTO, Seiji; 中西, 孝文; NAKANISHI, Takafumi; 原田, 敦; HARADA, Atsushi; 水野, 雅士; MIZUNO, Masashi
2004-01-01
This paper is concerned with an individual finite element modeling system for femur and biomechanical evaluations of the influences of loading conditions, bone shape and bone density on risks of hip fracture. Firstly, a method to construct an individual finite element model by morphological parameters that represent femoral shapes was developed. Using the models with different shapes constructed by this method, the effects of fall direction, posture of upper body, femur shape and bone density...
Finite element modeling of nanotube structures linear and non-linear models
Awang, Mokhtar; Muhammad, Ibrahim Dauda
2016-01-01
This book presents a new approach to modeling carbon structures such as graphene and carbon nanotubes using finite element methods, and addresses the latest advances in numerical studies for these materials. Based on the available findings, the book develops an effective finite element approach for modeling the structure and the deformation of grapheme-based materials. Further, modeling processing for single-walled and multi-walled carbon nanotubes is demonstrated in detail.
Gene ontology based transfer learning for protein subcellular localization
Directory of Open Access Journals (Sweden)
Zhou Shuigeng
2011-02-01
Full Text Available Abstract Background Prediction of protein subcellular localization generally involves many complex factors, and using only one or two aspects of data information may not tell the true story. For this reason, some recent predictive models are deliberately designed to integrate multiple heterogeneous data sources for exploiting multi-aspect protein feature information. Gene ontology, hereinafter referred to as GO, uses a controlled vocabulary to depict biological molecules or gene products in terms of biological process, molecular function and cellular component. With the rapid expansion of annotated protein sequences, gene ontology has become a general protein feature that can be used to construct predictive models in computational biology. Existing models generally either concatenated the GO terms into a flat binary vector or applied majority-vote based ensemble learning for protein subcellular localization, both of which can not estimate the individual discriminative abilities of the three aspects of gene ontology. Results In this paper, we propose a Gene Ontology Based Transfer Learning Model (GO-TLM for large-scale protein subcellular localization. The model transfers the signature-based homologous GO terms to the target proteins, and further constructs a reliable learning system to reduce the adverse affect of the potential false GO terms that are resulted from evolutionary divergence. We derive three GO kernels from the three aspects of gene ontology to measure the GO similarity of two proteins, and derive two other spectrum kernels to measure the similarity of two protein sequences. We use simple non-parametric cross validation to explicitly weigh the discriminative abilities of the five kernels, such that the time & space computational complexities are greatly reduced when compared to the complicated semi-definite programming and semi-indefinite linear programming. The five kernels are then linearly merged into one single kernel for
Surface photovoltage measurements and finite element modeling of SAW devices.
Energy Technology Data Exchange (ETDEWEB)
Donnelly, Christine
2012-03-01
Over the course of a Summer 2011 internship with the MEMS department of Sandia National Laboratories, work was completed on two major projects. The first and main project of the summer involved taking surface photovoltage measurements for silicon samples, and using these measurements to determine surface recombination velocities and minority carrier diffusion lengths of the materials. The SPV method was used to fill gaps in the knowledge of material parameters that had not been determined successfully by other characterization methods. The second project involved creating a 2D finite element model of a surface acoustic wave device. A basic form of the model with the expected impedance response curve was completed, and the model is ready to be further developed for analysis of MEMS photonic resonator devices.
Active earth pressure model tests versus finite element analysis
Pietrzak, Magdalena
2017-06-01
The purpose of the paper is to compare failure mechanisms observed in small scale model tests on granular sample in active state, and simulated by finite element method (FEM) using Plaxis 2D software. Small scale model tests were performed on rectangular granular sample retained by a rigid wall. Deformation of the sample resulted from simple wall translation in the direction `from the soil" (active earth pressure state. Simple Coulomb-Mohr model for soil can be helpful in interpreting experimental findings in case of granular materials. It was found that the general alignment of strain localization pattern (failure mechanism) may belong to macro scale features and be dominated by a test boundary conditions rather than the nature of the granular sample.
FEWA: a Finite Element model of Water flow through Aquifers
International Nuclear Information System (INIS)
Yeh, G.T.; Huff, D.D.
1983-11-01
This report documents the implementation and demonstration of a Finite Element model of Water flow through Aquifers (FEWA). The particular features of FEWA are its versatility and flexibility to deal with as many real-world problems as possible. Point as well as distributed sources/sinks are included to represent recharges/pumpings and rainfall infiltrations. All sources/sinks can be transient or steady state. Prescribed hydraulic head on the Dirichlet boundaries and fluxes on Neumann or Cauchy boundaries can be time-dependent or constant. Source/sink strength over each element and node, hydraulic head at each Dirichlet boundary node, and flux at each boundary segment can vary independently of each other. Either completely confined or completely unconfined aquifers, or partially confined and partially unconfined aquifers can be dealt with effectively. Discretization of a compound region with very irregular curved boundaries is made easy by including both quadrilateral and triangular elements in the formulation. Large-field problems can be solved efficiently by including a pointwise iterative solution strategy as an optional alternative to the direct elimination solution method for the matrix equation approximating the partial differential equation of groundwater flow. FEWA also includes transient flow through confining leaky aquifers lying above and/or below the aquifer of interest. The model is verified against three simple cases to which analytical solutions are available. It is then demonstrated by two examples of how the model can be applied to heterogeneous and anisotropic aquifers with transient boundary conditions, time-dependent sources/sinks, and confining aquitards for a confined aquifer of variable thickness and for a free surface problem in an unconfined aquifer, respectively. 20 references, 25 figures, 8 tables
FEWA: a Finite Element model of Water flow through Aquifers
Energy Technology Data Exchange (ETDEWEB)
Yeh, G.T.; Huff, D.D.
1983-11-01
This report documents the implementation and demonstration of a Finite Element model of Water flow through Aquifers (FEWA). The particular features of FEWA are its versatility and flexibility to deal with as many real-world problems as possible. Point as well as distributed sources/sinks are included to represent recharges/pumpings and rainfall infiltrations. All sources/sinks can be transient or steady state. Prescribed hydraulic head on the Dirichlet boundaries and fluxes on Neumann or Cauchy boundaries can be time-dependent or constant. Source/sink strength over each element and node, hydraulic head at each Dirichlet boundary node, and flux at each boundary segment can vary independently of each other. Either completely confined or completely unconfined aquifers, or partially confined and partially unconfined aquifers can be dealt with effectively. Discretization of a compound region with very irregular curved boundaries is made easy by including both quadrilateral and triangular elements in the formulation. Large-field problems can be solved efficiently by including a pointwise iterative solution strategy as an optional alternative to the direct elimination solution method for the matrix equation approximating the partial differential equation of groundwater flow. FEWA also includes transient flow through confining leaky aquifers lying above and/or below the aquifer of interest. The model is verified against three simple cases to which analytical solutions are available. It is then demonstrated by two examples of how the model can be applied to heterogeneous and anisotropic aquifers with transient boundary conditions, time-dependent sources/sinks, and confining aquitards for a confined aquifer of variable thickness and for a free surface problem in an unconfined aquifer, respectively. 20 references, 25 figures, 8 tables.
Modeling of Cementitious Representative Volume Element with Additives
Shahzamanian, M. M.; Basirun, W. J.
CEMHYD3D has been employed to simulate the representative volume element (RVE) of cementitious systems (Type I cement) containing fly ash (Class F) through a voxel-based finite element analysis (FEA) approach. Three-dimensional microstructures composed of voxels are generated for a heterogeneous cementitious material consisting of various constituent phases. The primary focus is to simulate a cementitious RVE containing fly ash and to present the homogenized macromechanical properties obtained from its analysis. Simple kinematic uniform boundary conditions as well as periodic boundary conditions were imposed on the RVE to obtain the principal and shear moduli. Our current work considers the effect of fly ash percentage on the elastic properties based on the mass and volume replacements. RVEs with lengths of 50, 100 and 200μm at different degrees of hydration are generated, and the elastic properties are modeled and simulated. In general, the elastic properties of a cementitious RVE with fly ash replacement for cement based on mass and volume differ from each other. Moreover, the finite element (FE) mesh density effect is studied. Results indicate that mechanical properties decrease with increasing mesh density.
Assessing women's lacrosse head impacts using finite element modelling.
Clark, J Michio; Hoshizaki, T Blaine; Gilchrist, Michael D
2018-04-01
Recently studies have assessed the ability of helmets to reduce peak linear and rotational acceleration for women's lacrosse head impacts. However, such measures have had low correlation with injury. Maximum principal strain interprets loading curves which provide better injury prediction than peak linear and rotational acceleration, especially in compliant situations which create low magnitude accelerations but long impact durations. The purpose of this study was to assess head and helmet impacts in women's lacrosse using finite element modelling. Linear and rotational acceleration loading curves from women's lacrosse impacts to a helmeted and an unhelmeted Hybrid III headform were input into the University College Dublin Brain Trauma Model. The finite element model was used to calculate maximum principal strain in the cerebrum. The results demonstrated for unhelmeted impacts, falls and ball impacts produce higher maximum principal strain values than stick and shoulder collisions. The strain values for falls and ball impacts were found to be within the range of concussion and traumatic brain injury. The results also showed that men's lacrosse helmets reduced maximum principal strain for follow-through slashing, falls and ball impacts. These findings are novel and demonstrate that for high risk events, maximum principal strain can be reduced by implementing the use of helmets if the rules of the sport do not effectively manage such situations. Copyright © 2018 Elsevier Ltd. All rights reserved.
Progress in Developing Finite Element Models Replicating Flexural Graphite Testing
International Nuclear Information System (INIS)
Bratton, Robert
2010-01-01
This report documents the status of flexural strength evaluations from current ASTM procedures and of developing finite element models predicting the probability of failure. This work is covered under QLD REC-00030. Flexural testing procedures of the American Society for Testing and Materials (ASTM) assume a linear elastic material that has the same moduli for tension and compression. Contrary to this assumption, graphite is known to have different moduli for tension and compression. A finite element model was developed and demonstrated that accounts for the difference in moduli tension and compression. Brittle materials such as graphite exhibit significant scatter in tensile strength, so probabilistic design approaches must be used when designing components fabricated from brittle materials. ASTM procedures predicting probability of failure in ceramics were compared to methods from the current version of the ASME graphite core components rules predicting probability of failure. Using the ASTM procedures yields failure curves at lower applied forces than the ASME rules. A journal paper was published in the Journal of Nuclear Engineering and Design exploring the statistical models of fracture in graphite.
A modified discrete element model for sea ice dynamics
Institute of Scientific and Technical Information of China (English)
LI Baohui; LI Hai; LIU Yu; WANG Anliang; JI Shunying
2014-01-01
Considering the discontinuous characteristics of sea ice on various scales, a modified discrete element mod-el (DEM) for sea ice dynamics is developed based on the granular material rheology. In this modified DEM, a soft sea ice particle element is introduced as a self-adjustive particle size function. Each ice particle can be treated as an assembly of ice floes, with its concentration and thickness changing to variable sizes un-der the conservation of mass. In this model, the contact forces among ice particles are calculated using a viscous-elastic-plastic model, while the maximum shear forces are described with the Mohr-Coulomb fric-tion law. With this modified DEM, the ice flow dynamics is simulated under the drags of wind and current in a channel of various widths. The thicknesses, concentrations and velocities of ice particles are obtained, and then reasonable dynamic process is analyzed. The sea ice dynamic process is also simulated in a vortex wind field. Taking the influence of thermodynamics into account, this modified DEM will be improved in the future work.
Discrete Element Modeling (DEM) of Triboelectrically Charged Particles: Revised Experiments
Hogue, Michael D.; Calle, Carlos I.; Curry, D. R.; Weitzman, P. S.
2008-01-01
In a previous work, the addition of basic screened Coulombic electrostatic forces to an existing commercial discrete element modeling (DEM) software was reported. Triboelectric experiments were performed to charge glass spheres rolling on inclined planes of various materials. Charge generation constants and the Q/m ratios for the test materials were calculated from the experimental data and compared to the simulation output of the DEM software. In this paper, we will discuss new values of the charge generation constants calculated from improved experimental procedures and data. Also, planned work to include dielectrophoretic, Van der Waals forces, and advanced mechanical forces into the software will be discussed.
Viscoelastic dynamic models of resilient elements used in railway tracks
Directory of Open Access Journals (Sweden)
Zbiciak Artur
2016-01-01
Full Text Available The paper presents selected theoretical aspects concerning viscoelastic dynamic modelling of resilient elements used in railway tracks. In order to characterize the research methodology for resilient mats in railway tracks, German Standards [1-4] are used herein. The main goal of the paper is to demonstrate the procedure of insertion loss calculation for a single degree of freedom truck system containing under-ballast mats. Selected results of certain dynamic characteristics of resilient truck systems (transmissibility, Bode and Nyquist plots etc. are also discussed. The results of calculations visualized in graphs, were obtained by using own applications written in programming language MATLAB.
A finite element model for the quench front evolution problem
International Nuclear Information System (INIS)
Folescu, J.; Galeao, A.C.N.R.; Carmo, E.G.D. do.
1985-01-01
A model for the rewetting problem associated with the loss of coolant accident in a PWR reactor is proposed. A variational formulation for the time-dependent heat conduction problem on fuel rod cladding is used, and appropriate boundary conditions are assumed in order to simulate the thermal interaction between the fuel rod cladding and the fluid. A numerical procedure which uses the finite element method for the spatial discretization and a Crank-Nicolson-like method for the step-by-step integration is developed. Some numerical results are presented showing the quench front evolution and its stationary profile. (Author) [pt
A coordination chemistry approach for modeling trace element adsorption
International Nuclear Information System (INIS)
Bourg, A.C.M.
1986-01-01
The traditional distribution coefficient, Kd, is highly dependent on the water chemistry and the surface properties of the geological system being studied and is therefore quite inappropriate for use in predictive models. Adsorption, one of the many processes included in Kd values, is described here using a coordination chemistry approach. The concept of adsorption of cationic trace elements by solid hydrous oxides can be applied to natural solids. The adsorption process is thus understood in terms of a classical complexation leading to the formation of surface (heterogeneous) ligands. Applications of this concept to some freshwater, estuarine and marine environments are discussed. (author)
Peltier cells as temperature control elements: Experimental characterization and modeling
International Nuclear Information System (INIS)
Mannella, Gianluca A.; La Carrubba, Vincenzo; Brucato, Valerio
2014-01-01
The use of Peltier cells to realize compact and precise temperature controlled devices is under continuous extension in recent years. In order to support the design of temperature control systems, a simplified modeling of heat transfer dynamics for thermoelectric devices is presented. By following a macroscopic approach, the heat flux removed at the cold side of Peltier cell can be expressed as Q . c =γ(T c −T c eq ), where γ is a coefficient dependent on the electric current, T c and T c eq are the actual and steady state cold side temperature, respectively. On the other hand, a microscopic modeling approach was pursued via finite element analysis software packages. To validate the models, an experimental apparatus was designed and build-up, consisting in a sample vial with the surfaces in direct contact with Peltier cells. Both modeling approaches led to reliable prediction of transient and steady state sample temperature. -- Highlights: • Simplified modeling of heat transfer dynamics in Peltier cells. • Coupled macroscopic and microscopic approach. • Experimental apparatus: temperature control of a sample vial. • Both modeling approaches predict accurately the transient and steady state sample temperature
Long Fibre Composite Modelling Using Cohesive User's Element
International Nuclear Information System (INIS)
Kozak, Vladislav; Chlup, Zdenek
2010-01-01
The development glass matrix composites reinforced by unidirectional long ceramic fibre has resulted in a family of very perspective structural materials. The only disadvantage of such materials is relatively high brittleness at room temperature. The main micromechanisms acting as toughening mechanism are the pull out, crack bridging, matrix cracking. There are other mechanisms as crack deflection etc. but the primer mechanism is mentioned pull out which is governed by interface between fibre and matrix. The contribution shows a way how to predict and/or optimise mechanical behaviour of composite by application of cohesive zone method and write user's cohesive element into the FEM numerical package Abaqus. The presented results from numerical calculations are compared with experimental data. Crack extension is simulated by means of element extinction algorithms. The principal effort is concentrated on the application of the cohesive zone model with the special traction separation (bridging) law and on the cohesive zone modelling. Determination of micro-mechanical parameters is based on the combination of static tests, microscopic observations and numerical calibration procedures.
Finite element modeling of electrically rectified piezoelectric energy harvesters
International Nuclear Information System (INIS)
Wu, P H; Shu, Y C
2015-01-01
Finite element models are developed for designing electrically rectified piezoelectric energy harvesters. They account for the consideration of common interface circuits such as the standard and parallel-/series-SSHI (synchronized switch harvesting on inductor) circuits, as well as complicated structural configurations such as arrays of piezoelectric oscillators. The idea is to replace the energy harvesting circuit by the proposed equivalent load impedance together with the capacitance of negative value. As a result, the proposed framework is capable of being implemented into conventional finite element solvers for direct system-level design without resorting to circuit simulators. The validation based on COMSOL simulations carried out for various interface circuits by the comparison with the standard modal analysis model. The framework is then applied to the investigation on how harvested power is reduced due to fabrication deviations in geometric and material properties of oscillators in an array system. Remarkably, it is found that for a standard array system with strong electromechanical coupling, the drop in peak power turns out to be insignificant if the optimal load is carefully chosen. The second application is to design broadband energy harvesting by developing array systems with suitable interface circuits. The result shows that significant broadband is observed for the parallel (series) connection of oscillators endowed with the parallel-SSHI (series-SSHI) circuit technique. (paper)
Finite element modeling of electrically rectified piezoelectric energy harvesters
Wu, P. H.; Shu, Y. C.
2015-09-01
Finite element models are developed for designing electrically rectified piezoelectric energy harvesters. They account for the consideration of common interface circuits such as the standard and parallel-/series-SSHI (synchronized switch harvesting on inductor) circuits, as well as complicated structural configurations such as arrays of piezoelectric oscillators. The idea is to replace the energy harvesting circuit by the proposed equivalent load impedance together with the capacitance of negative value. As a result, the proposed framework is capable of being implemented into conventional finite element solvers for direct system-level design without resorting to circuit simulators. The validation based on COMSOL simulations carried out for various interface circuits by the comparison with the standard modal analysis model. The framework is then applied to the investigation on how harvested power is reduced due to fabrication deviations in geometric and material properties of oscillators in an array system. Remarkably, it is found that for a standard array system with strong electromechanical coupling, the drop in peak power turns out to be insignificant if the optimal load is carefully chosen. The second application is to design broadband energy harvesting by developing array systems with suitable interface circuits. The result shows that significant broadband is observed for the parallel (series) connection of oscillators endowed with the parallel-SSHI (series-SSHI) circuit technique.
Elements of Constitutive Modelling and Numerical Analysis of Frictional Soils
DEFF Research Database (Denmark)
Jakobsen, Kim Parsberg
of a constitutive model for soil is based on a profound knowledge of the soil behaviour upon loading. In the present study it is attempted to get a better understanding of the soil behaviour bv performing a number of triaxial compression tests on sand. The stress-strain behaviour of sand depends strongly......This thesis deals with elements of elasto-plastic constitutive modelling and numerical analysis of frictional soils. The thesis is based on a number of scientific papers and reports in which central characteristics of soil behaviour and applied numerical techniques are considered. The development...... and subsequently dilates during shear. The change in the volumetric behaviour of the soil skeleton is commonly referred to as the characteristic state. The stress ratio corresponding to the characteristic state is independent of the mean normal effective stress and the relative density, but depends on the stress...
MATERIAL ELEMENT MODEL FOR EXTRINSIC SEMICONDUCTORS WITH DEFECTS OF DISLOCATION
Directory of Open Access Journals (Sweden)
Maria Paola Mazzeo
2011-07-01
Full Text Available In a previous paper we outlined a geometric model for the thermodynamic description of extrinsic semiconductors with defects of dislocation.Applying a geometrization technique, within the rationalextended irreversible thermodynamics with internal variables, the dynamical system for simple material elements of these media, the expressions of the entropy function and the entropy 1-form were obtained. In this contribution we deepen the study of this geometric model. We give a detailed description of the defective media under consideration and of the dislocation core tensor, we introduce the transformation induced by the process and, applying the closure conditions for the entropy 1-form, we derive the necessary conditions for the existence of the entropy function. These and other results are new in the paper.The derivation of the relevant entropy 1-form is the starting point to introduce an extended thermodynamical phase space.
Discrete element modeling of calcium-silicate-hydrate
International Nuclear Information System (INIS)
Chandler, Mei Qiang; Peters, John F; Pelessone, Daniele
2013-01-01
The discrete element method (DEM) was used to model calcium-silicate-hydrate (C-S-H) at the nanoscale. The C-S-H nanoparticles were modeled as spherical particles with diameters of approximately 5 nm. Interparticle forces included traditional mechanical contact forces, van der Waals forces and ionic correlation forces due to negatively charged C-S-H nanoparticles and ion species in the nanopores. Previous work by the authors demonstrated the DEM method was feasible in studying the properties of the C-S-H nanostructures. In this work, the simulations were performed to look into the effects of nanoparticle packing, nanoparticle morphology, interparticle forces and nanoparticle properties on the deformation mechanisms and mechanical properties of the C-S-H matrix. This work will provide insights into possible ways to improve the properties of the C-S-H matrix. (paper)
Finite-element model of ultrasonic NDE [nondestructive evaluation
International Nuclear Information System (INIS)
Lord, W.
1989-07-01
An understanding of the way in which ultrasound interacts with defects in materials is essential to the development of improved nondestructive testing procedures for the inspection of critical power plant components. Traditionally, the modeling of such phenomena has been approached from an analytical standpoint in which appropriate assumptions are made concerning material properties, geometrical constraints and defect boundaries in order to arrive at closed form solutions. Such assumptions, by their very nature, tend to inhibit the development of complete input/output NDT system models suitable for predicting realistic piezoelectric transducer signals from the interaction of pulsed, finite-aperture ultrasound with arbitrarily shaped defects in the kinds of materials of interest to the utilities. The major thrust of EPRI Project RP 2687-2 is to determine the feasibility of applying finite element analysis techniques to overcome these problems. 85 refs., 64 figs., 3 tabs
Heterogeneous modelling and finite element analysis of the femur
Directory of Open Access Journals (Sweden)
Zhang Binkai
2017-01-01
Full Text Available As the largest and longest bone in the human body, the femur has important research value and application prospects. This paper introduces a fast reconstruction method with Mimics and ANSYS software to realize the heterogeneous modelling of the femur according to Hu distribution of the CT series, and simulates it in various situations by finite element analysis to study the mechanical characteristics of the femur. The femoral heterogeneous model shows the distribution of bone mineral density and material properties, which can be used to assess the diagnosis and treatment of bone diseases. The stress concentration position of the femur under different conditions can be calculated by the simulation, which can provide reference for the design and material selection of prosthesis.
NON-LINEAR FINITE ELEMENT MODELING OF DEEP DRAWING PROCESS
Directory of Open Access Journals (Sweden)
Hasan YILDIZ
2004-03-01
Full Text Available Deep drawing process is one of the main procedures used in different branches of industry. Finding numerical solutions for determination of the mechanical behaviour of this process will save time and money. In die surfaces, which have complex geometries, it is hard to determine the effects of parameters of sheet metal forming. Some of these parameters are wrinkling, tearing, and determination of the flow of the thin sheet metal in the die and thickness change. However, the most difficult one is determination of material properties during plastic deformation. In this study, the effects of all these parameters are analyzed before producing the dies. The explicit non-linear finite element method is chosen to be used in the analysis. The numerical results obtained for non-linear material and contact models are also compared with the experiments. A good agreement between the numerical and the experimental results is obtained. The results obtained for the models are given in detail.
Customized Finite Element Modelling of the Human Cornea.
Directory of Open Access Journals (Sweden)
Irene Simonini
Full Text Available To construct patient-specific solid models of human cornea from ocular topographer data, to increase the accuracy of the biomechanical and optical estimate of the changes in refractive power and stress caused by photorefractive keratectomy (PRK.Corneal elevation maps of five human eyes were taken with a rotating Scheimpflug camera combined with a Placido disk before and after refractive surgery. Patient-specific solid models were created and discretized in finite elements to estimate the corneal strain and stress fields in preoperative and postoperative configurations and derive the refractive parameters of the cornea.Patient-specific geometrical models of the cornea allow for the creation of personalized refractive maps at different levels of IOP. Thinned postoperative corneas show a higher stress gradient across the thickness and higher sensitivity of all geometrical and refractive parameters to the fluctuation of the IOP.Patient-specific numerical models of the cornea can provide accurate quantitative information on the refractive properties of the cornea under different levels of IOP and describe the change of the stress state of the cornea due to refractive surgery (PRK. Patient-specific models can be used as indicators of feasibility before performing the surgery.
Calibration under uncertainty for finite element models of masonry monuments
Energy Technology Data Exchange (ETDEWEB)
Atamturktur, Sezer,; Hemez, Francois,; Unal, Cetin
2010-02-01
Historical unreinforced masonry buildings often include features such as load bearing unreinforced masonry vaults and their supporting framework of piers, fill, buttresses, and walls. The masonry vaults of such buildings are among the most vulnerable structural components and certainly among the most challenging to analyze. The versatility of finite element (FE) analyses in incorporating various constitutive laws, as well as practically all geometric configurations, has resulted in the widespread use of the FE method for the analysis of complex unreinforced masonry structures over the last three decades. However, an FE model is only as accurate as its input parameters, and there are two fundamental challenges while defining FE model input parameters: (1) material properties and (2) support conditions. The difficulties in defining these two aspects of the FE model arise from the lack of knowledge in the common engineering understanding of masonry behavior. As a result, engineers are unable to define these FE model input parameters with certainty, and, inevitably, uncertainties are introduced to the FE model.
Directory of Open Access Journals (Sweden)
V. A. Zverev
2016-01-01
Full Text Available The article objective is to justify the rationale for selecting the multilayer finite element model parameters of the bearing structure of a general-purpose launch complex unit.A typical design element of the launch complex unit, i.e. a mount of the hydraulic or pneumatic cylinder, block, etc. is under consideration. The mount represents a set of the cantilevered axis and external structural cage. The most loaded element of the cage is disk to which a moment is transferred from the cantilevered axis due to actuator effort acting on it.To calculate the stress-strain state of disk was used a finite element method. Five models of disk mount were created. The only difference in models was the number of layers of the finite elements through the thickness of disk. There were models, which had one, three, five, eight, and fourteen layers of finite elements through the thickness of disk. For each model, we calculated the equivalent stresses arising from the action of the test load. Disk models were formed and calculated using the MSC Nastran complex software.The article presents results in the table to show data of equivalent stresses in each of the multi-layered models and graphically to illustrate the changing equivalent stresses through the thickness of disk.Based on these results we have given advice on selecting the proper number of layers in the model allowing a desirable accuracy of results with the lowest run time. In addition, it is concluded that there is a need to use the multi-layer models in assessing the performance of structural elements in case the stress exceeds the allowable one in their surface layers.
Finite Element Analysis of Patella Alta: A Patellofemoral Instability Model.
Watson, Nicole A; Duchman, Kyle R; Grosland, Nicole M; Bollier, Matthew J
2017-01-01
This study aims to provide biomechanical data on the effect of patella height in the setting of medial patellofemoral ligament (MPFL) reconstruction using finite element analysis. The study will also examine patellofemoral joint biomechanics using variable femoral insertion sites for MPFL reconstruction. A previously validated finite element knee model was modified to study patella alta and baja by translating the patella a given distance to achieve each patella height ratio. Additionally, the models were modified to study various femoral insertion sites of the MPFL (anatomic, anterior, proximal, and distal) for each patella height model, resulting in 32 unique scenarios available for investigation. In the setting of patella alta, the patellofemoral contact area decreased, resulting in a subsequent increase in maximum patellofemoral contact pressures as compared to the scenarios with normal patellar height. Additionally, patella alta resulted in decreased lateral restraining forces in the native knee scenario as well as following MPFL reconstruction. Changing femoral insertion sites had a variable effect on patellofemoral contact pressures; however, distal and anterior femoral tunnel malpositioning in the setting of patella alta resulted in grossly elevated maximum patellofemoral contact pressures as compared to other scenarios. Patella alta after MPFL reconstruction results in decreased lateral restraining forces and patellofemoral contact area and increased maximum patellofemoral contact pressures. When the femoral MPFL tunnel is malpositioned anteriorly or distally on the femur, the maximum patellofemoral contact pressures increase with severity of patella alta. When evaluating patients with patellofemoral instability, it is important to recognize patella alta as a potential aggravating factor. Failure to address patella alta in the setting of MPFL femoral tunnel malposition may result in even further increases in patellofemoral contact pressures, making it
Evaluation of radiation damping using 3-D finite element models
International Nuclear Information System (INIS)
Vaughan, D.K.; Isenberg, J.
1983-01-01
The paper presents an analytic approach which is being used to quantify the contribution of radiation damping to overall system damping. The approach uses three-dimensional finite element techniques and can easily include details of site geology, foundation shape, and embedment depth. The approach involves performing free vibration response analyses for each soil-structure interaction (SSI) mode of interest. The structural model is specified without damping and, consequently, amplitude decay of the structure's free vibration response is a measure of the radiation damping characteristics of the soil-structure system for the particular deformational mode being investigated. The computational approach developed is highly efficient in order to minimize the impact of including three-dimensional geometry within the model. A new finite element code, FLEX, has been developed to represent the soil continuum. FLEX uses a highly optimized explicit time integration algorithm which takes advantage of parallel processing on vector machines, such as the CRAY 1 computer. A modal representation of the superstructure is used in combination with a substructuring approach to solve for the coupled response of the soil-structure system. This requires solving for numerical Green's functions for each degree-of-freedom of the foundation (assumed rigid). Once computed for a particular site and foundation, these Green's functions may be used within a convolution integral to represent the continuum forces on the foundation for any free vibration SSI response computation of any superstructure model. This analytic approach is applied to an investigation of the radiation damping coefficients for the first two fundamental SSI modes of the HDR containment structure. (orig./HP)
Finite Element Modeling of the Posterior Eye in Microgravity
Feola, Andrew; Raykin, Julia; Mulugeta, Lealem; Gleason, Rudolph; Myers, Jerry G.; Nelson, Emily S.; Samuels, Brian; Ethier, C. Ross
2015-01-01
Microgravity experienced during spaceflight affects astronauts in various ways, including weakened muscles and loss of bone density. Recently, visual impairment and intracranial pressure (VIIP) syndrome has become a major concern for space missions lasting longer than 30 days. Astronauts suffering from VIIP syndrome have changes in ocular anatomical and visual impairment that persist after returning to earth. It is hypothesized that a cephalad fluid shift in microgravity may increase the intracranial pressure (ICP), which leads to an altered biomechanical environment of the posterior globe and optic nerve sheath (ONS).Currently, there is a lack of knowledge of how elevated ICP may lead to vision impairment and connective tissue changes in VIIP. Our goal was to develop a finite element model to simulate the acute effects of elevated ICP on the posterior eye and optic nerve sheath. We used a finite element (FE) analysis approach to understand the response of the lamina cribrosa and optic nerve to the elevations in ICP thought to occur in microgravity and to identify which tissue components have the greatest impact on strain experienced by optic nerve head tissues.
Finite element modelling of cornea mechanics: a review
Directory of Open Access Journals (Sweden)
Talisa Mohammad Nejad
2014-01-01
Full Text Available The cornea is a transparent tissue in front of the eye that refracts light and facilitates vision. A slight change in the geometry of the cornea remarkably affects the optical power. Because of this sensitivity, biomechanical study of the cornea can reveal much about its performance and function. In vivo and in vitro studies have been conducted to investigate the mechanics of the cornea and determine its characteristics. Numerical techniques such as the finite element method (FEM have been extensively implemented as effective and noninvasive methods for analyzing corneal mechanics and possible disorders. This article reviews the use of FEM for assessing the mechanical behavior of the cornea. Different applications of FEM in corneal disease studies, surgical predictions, impact simulations, and clinical applications have been reviewed. Some suggestions for the future of this type of modeling in the area of corneal mechanics are also discussed.
Modelling the Implications of Quality Management Elements on Strategic Flexibility
Directory of Open Access Journals (Sweden)
Ana Belén Escrig-Tena
2011-01-01
Full Text Available This paper presents a theoretical and empirical analysis of the implications of a quality management (QM initiative on strategic flexibility. Our study defines flexibility from a strategic approach and examines the extent to which, why, and how the triggering factors of strategic flexibility are related to QM elements. The hypotheses put forward are tested in an empirical study carried out on a sample of Spanish firms, using structural equation models. The results demonstrate the positive effect of adopting an integral QM initiative on enhancing strategic flexibility. QM enhances strategic flexibility more effectively when it is introduced comprehensively rather than in a piecemeal fashion. A series of practices linked to the application of a QM initiative are outlined, which managers can use to improve strategic flexibility. The approach used in the study can be applied to analyse other antecedents of flexibility and to propose possible studies that consider QM as an antecedent of other organisational variables.
Determining Trajectory of Triboelectrically Charged Particles, Using Discrete Element Modeling
2008-01-01
The Kennedy Space Center (KSC) Electrostatics and Surface Physics Laboratory is participating in an Innovative Partnership Program (IPP) project with an industry partner to modify a commercial off-the-shelf simulation software product to treat the electrodynamics of particulate systems. Discrete element modeling (DEM) is a numerical technique that can track the dynamics of particle systems. This technique, which was introduced in 1979 for analysis of rock mechanics, was recently refined to include the contact force interaction of particles with arbitrary surfaces and moving machinery. In our work, we endeavor to incorporate electrostatic forces into the DEM calculations to enhance the fidelity of the software and its applicability to (1) particle processes, such as electrophotography, that are greatly affected by electrostatic forces, (2) grain and dust transport, and (3) the study of lunar and Martian regoliths.
Element-specific density profiles in interacting biomembrane models
International Nuclear Information System (INIS)
Schneck, Emanuel; Rodriguez-Loureiro, Ignacio; Bertinetti, Luca; Gochev, Georgi; Marin, Egor; Novikov, Dmitri; Konovalov, Oleg
2017-01-01
Surface interactions involving biomembranes, such as cell–cell interactions or membrane contacts inside cells play important roles in numerous biological processes. Structural insight into the interacting surfaces is a prerequisite to understand the interaction characteristics as well as the underlying physical mechanisms. Here, we work with simplified planar experimental models of membrane surfaces, composed of lipids and lipopolymers. Their interaction is quantified in terms of pressure–distance curves using ellipsometry at controlled dehydrating (interaction) pressures. For selected pressures, their internal structure is investigated by standing-wave x-ray fluorescence (SWXF). This technique yields specific density profiles of the chemical elements P and S belonging to lipid headgroups and polymer chains, as well as counter-ion profiles for charged surfaces. (paper)
Modeling the behavior of optical elements in radiation environments
International Nuclear Information System (INIS)
Barlow, T.A.; Rhoades, C.E. Jr.; Merker, M.; Triplett, J.R.
1986-01-01
Calculation of heating caused by the deposition of x-rays in thin film optical elements is complicated because the mean free path of photo and autoionization electrons is comparable to the thin film thickness and thus the electron deposition cannot be considered local. This paper describes the modeling in a 1-D code of: (a) x-ray deposition and transport; (b) electron production, deposition and transport; and (c) thermal conduction and transport. X-ray transport is handled by multigroup discrete ordinates, electron transport is done by the method of characteristics, applied to the two term spherical harmonics expansion approximation (P1) to the Spencer-Lewis transport equation, and thermal transport is computed by a simple Richardson extrapolation of a backward Euler solution to the heat conduction equations. Results of a few test cases are presented. 8 refs., 26 figs., 2 tabs
Contribution to finite element modelling of airfoil aeroelastic instabilities
Directory of Open Access Journals (Sweden)
Horáček J.
2007-10-01
Full Text Available Nonlinear equations of motion for a flexibly supported rigid airfoil with additional degree of freedom for controlling of the profile motion by a trailing edge flap are derived for large vibration amplitudes. Preliminary results for numerical simulation of flow-induced airfoil vibrations in a laminar incompressible flow are presented for the NACA profile 0012 with three-degrees of freedom (vertical translation, rotation around the elastic axis and rotation of the flap. The developed numerical solution of the Navier – Stokes equations and the Arbitrary Eulerian-Lagrangian approach enable to consider the moving grid for the finite element modelling of the fluid flow around the oscillating airfoil. A sequence of numerical simulation examples is presented for Reynolds numbers up to about Re~10^5, when the system loses the aeroelastic stability, and when the large displacements of the profile and a post-critical behaviour of the system take place.
Finite-element modeling of soft tissue rolling indentation.
Sangpradit, Kiattisak; Liu, Hongbin; Dasgupta, Prokar; Althoefer, Kaspar; Seneviratne, Lakmal D
2011-12-01
We describe a finite-element (FE) model for simulating wheel-rolling tissue deformations using a rolling FE model (RFEM). A wheeled probe performing rolling tissue indentation has proven to be a promising approach for compensating for the loss of haptic and tactile feedback experienced during robotic-assisted minimally invasive surgery (H. Liu, D. P. Noonan, B. J. Challacombe, P. Dasgupta, L. D. Seneviratne, and K. Althoefer, "Rolling mechanical imaging for tissue abnormality localization during minimally invasive surgery, " IEEE Trans. Biomed. Eng., vol. 57, no. 2, pp. 404-414, Feb. 2010; K. Sangpradit, H. Liu, L. Seneviratne, and K. Althoefer, "Tissue identification using inverse finite element analysis of rolling indentation," in Proc. IEEE Int. Conf. Robot. Autom. , Kobe, Japan, 2009, pp. 1250-1255; H. Liu, D. Noonan, K. Althoefer, and L. Seneviratne, "The rolling approach for soft tissue modeling and mechanical imaging during robot-assisted minimally invasive surgery," in Proc. IEEE Int. Conf. Robot. Autom., May 2008, pp. 845-850; H. Liu, P. Puangmali, D. Zbyszewski, O. Elhage, P. Dasgupta, J. S. Dai, L. Seneviratne, and K. Althoefer, "An indentation depth-force sensing wheeled probe for abnormality identification during minimally invasive surgery," Proc. Inst. Mech. Eng., H, vol. 224, no. 6, pp. 751-63, 2010; D. Noonan, H. Liu, Y. Zweiri, K. Althoefer, and L. Seneviratne, "A dual-function wheeled probe for tissue viscoelastic property identification during minimally invasive surgery," in Proc. IEEE Int. Conf. Robot. Autom. , 2008, pp. 2629-2634; H. Liu, J. Li, Q. I. Poon, L. D. Seneviratne, and K. Althoefer, "Miniaturized force indentation-depth sensor for tissue abnormality identification," IEEE Int. Conf. Robot. Autom., May 2010, pp. 3654-3659). A sound understanding of wheel-tissue rolling interaction dynamics will facilitate the evaluation of signals from rolling indentation. In this paper, we model the dynamic interactions between a wheeled probe and a
3D finite element modeling of sliding wear
Buentello Hernandez, Rodolfo G.
Wear is defined as "the removal of material volume through some mechanical process between two surfaces". There are many mechanical situations that can induce wear and each can involve many wear mechanisms. This research focuses on the mechanical wear due to dry sliding between two surfaces. Currently there is a need to identify and compare materials that would endure sliding wear under severe conditions such as high velocities. The high costs associated with the field experimentation of systems subject to high-speed sliding, has prevented the collection of the necessary data required to fully characterize this phenomena. Simulating wear through Finite Elements (FE) would enable its prediction under different scenarios and would reduce experimentation costs. In the aerospace, automotive and weapon industries such a model can aid in material selection, design and/or testing of systems subjected to wear in bearings, gears, brakes, gun barrels, slippers, locomotive wheels, or even rocket test tracks. The 3D wear model presented in this dissertation allows one to reasonably predict high-speed sliding mechanical wear between two materials. The model predictions are reasonable, when compared against those measured on a sled slipper traveling over the Holloman High Speed Tests Track. This slipper traveled a distance of 5,816 meters in 8.14 seconds and reached a maximum velocity of 1,530 m/s.
Multiphase poroelastic finite element models for soft tissue structures
International Nuclear Information System (INIS)
Simon, B.R.
1992-01-01
During the last two decades, biological structures with soft tissue components have been modeled using poroelastic or mixture-based constitutive laws, i.e., the material is viewed as a deformable (porous) solid matrix that is saturated by mobile tissue fluid. These structures exhibit a highly nonlinear, history-dependent material behavior; undergo finite strains; and may swell or shrink when tissue ionic concentrations are altered. Give the geometric and material complexity of soft tissue structures and that they are subjected to complicated initial and boundary conditions, finite element models (FEMs) have been very useful for quantitative structural analyses. This paper surveys recent applications of poroelastic and mixture-based theories and the associated FEMs for the study of the biomechanics of soft tissues, and indicates future directions for research in this area. Equivalent finite-strain poroelastic and mixture continuum biomechanical models are presented. Special attention is given to the identification of material properties using a porohyperelastic constitutive law ans a total Lagrangian view for the formulation. The associated FEMs are then formulated to include this porohyperelastic material response and finite strains. Extensions of the theory are suggested in order to include inherent viscoelasticity, transport phenomena, and swelling in soft tissue structures. A number of biomechanical research areas are identified, and possible applications of the porohyperelastic and mixture-based FEMs are suggested. 62 refs., 11 figs., 3 tabs
Finite element modeling of superelastic nickel-titanium orthodontic wires.
Naceur, Ines Ben; Charfi, Amin; Bouraoui, Tarak; Elleuch, Khaled
2014-11-28
Thanks to its good corrosion resistance and biocompatibility, superelastic Ni–Ti wire alloys have been successfully used in orthodontic treatment. Therefore, it is important to quantify and evaluate the level of orthodontic force applied to the bracket and teeth in order to achieve tooth movement. In this study, three dimensional finite element models with a Gibbs-potential-based-formulation and thermodynamic principles were used. The aim was to evaluate the influence of possible intraoral temperature differences on the forces exerted by NiTi orthodontic arch wires with different cross sectional shapes and sizes. The prediction made by this phenomenological model, for superelastic tensile and bending tests, shows good agreement with the experimental data. A bending test is simulated to study the force variation of an orthodontic NiTi arch wire when it loaded up to the deflection of 3 mm, for this task one half of the arch wire and the 3 adjacent brackets were modeled. The results showed that the stress required for the martensite transformation increases with the increase of cross-sectional dimensions and temperature. Associated with this increase in stress, the plateau of this transformation becomes steeper. In addition, the area of the mechanical hysteresis, measured as the difference between the forces of the upper and lower plateau, increases.
Finite element modelling of vocal tract changes after voice therapy
Directory of Open Access Journals (Sweden)
Vampola T.
2011-06-01
Full Text Available Two 3D finite element (FE models were constructed, based on CT measurements of a subject phonating on [a:] before and after phonation into a tube. Acoustic analysis was performed by exciting the models with acoustic flow velocity at the vocal folds. The generated acoustic pressure of the response was computed in front of the mouth and inside the vocal tract for both FE models. Average amplitudes of the pressure oscillations inside the vocal tract and in front of the mouth were compared to display the cost-efficiency of sound energy transfer at different formant frequencies. The formants F1–F3 correspond to classical vibration modes also solvable by 1D vocal tract model. However, for higher formants, there occur more complicated transversal modes which require 3D modelling. A special attention is given to the higher frequency range (above 3.5 Hz where transversal modes exist between piriform sinuses and valleculae. Comparison of the pressure oscillation inside and outside the vocal tract showed that formants differ in their efficiency, F4 (at about 3.5 kHz, i.e. at the speaker’s or singer’s formant region being the most effective. The higher formants created a clear formant cluster around 4 kHz after the vocal exercise with the tube. Since the human ear is most sensitive to frequencies between 2 and 4 kHz concentration of sound energy in this frequency region (F4–F5 is effective for communication. The results suggest that exercising using phonation into tubes help in improving the vocal economy.
Finite-element solidification modelling of metals and binary alloys
International Nuclear Information System (INIS)
Mathew, P.M.
1986-12-01
In the Canadian Nuclear Fuel Waste Management Program, cast metals and alloys are being evaluated for their ability to support a metallic fuel waste container shell under disposal vault conditions and to determine their performance as an additional barrier to radionuclide release. These materials would be cast to fill residual free space inside the container and allowed to solidify without major voids. To model their solidification characteristics following casting, a finite-element model, FAXMOD-3, was adopted. Input parameters were modified to account for the latent heat of fusion of the metals and alloys considered. This report describes the development of the solidification model and its theoretical verification. To model the solidification of pure metals and alloys that melt at a distinct temperature, the latent heat of fusion was incorporated as a double-ramp function in the specific heat-temperature relationship, within an interval of +- 1 K around the solidification temperature. Comparison of calculated results for lead, tin and lead-tin eutectic melts, unidirectionally cooled with and without superheat, showed good agreement with an alternative technique called the integral profile method. To model the solidification of alloys that melt over a temperature interval, the fraction of solid in the solid-liquid region, as calculated from the Scheil equation, was used to determine the fraction of latent heat to be liberated over a temperature interval within the solid-liquid zone. Comparison of calculated results for unidirectionally cooled aluminum-4 wt.% copper melt, with and without superheat, showed good agreement with alternative finite-difference techniques
Hadron matrix elements of quark operators in the relativistic quark model, 2. Model calculation
Energy Technology Data Exchange (ETDEWEB)
Arisue, H; Bando, M; Toya, M [Kyoto Univ. (Japan). Dept. of Physics; Sugimoto, H
1979-11-01
Phenomenological studies of the matrix elements of two- and four-quark operators are made on the basis of relativistic independent quark model for typical three cases of the potentials: rigid wall, linearly rising and Coulomb-like potentials. The values of the matrix elements of two-quark operators are relatively well reproduced in each case, but those of four-quark operators prove to be too small in the independent particle treatment. It is suggested that the short-range two-quark correlations must be taken into account in order to improve the values of the matrix elements of the four-quark operators.
A finite element model for protein transport in vivo
Directory of Open Access Journals (Sweden)
Montas Hubert J
2007-06-01
Full Text Available Abstract Background Biological mass transport processes determine the behavior and function of cells, regulate interactions between synthetic agents and recipient targets, and are key elements in the design and use of biosensors. Accurately predicting the outcomes of such processes is crucial to both enhancing our understanding of how these systems function, enabling the design of effective strategies to control their function, and verifying that engineered solutions perform according to plan. Methods A Galerkin-based finite element model was developed and implemented to solve a system of two coupled partial differential equations governing biomolecule transport and reaction in live cells. The simulator was coupled, in the framework of an inverse modeling strategy, with an optimization algorithm and an experimental time series, obtained by the Fluorescence Recovery after Photobleaching (FRAP technique, to estimate biomolecule mass transport and reaction rate parameters. In the inverse algorithm, an adaptive method was implemented to calculate sensitivity matrix. A multi-criteria termination rule was developed to stop the inverse code at the solution. The applicability of the model was illustrated by simulating the mobility and binding of GFP-tagged glucocorticoid receptor in the nucleoplasm of mouse adenocarcinoma. Results The numerical simulator shows excellent agreement with the analytic solutions and experimental FRAP data. Detailed residual analysis indicates that residuals have zero mean and constant variance and are normally distributed and uncorrelated. Therefore, the necessary and sufficient criteria for least square parameter optimization, which was used in this study, were met. Conclusion The developed strategy is an efficient approach to extract as much physiochemical information from the FRAP protocol as possible. Well-posedness analysis of the inverse problem, however, indicates that the FRAP protocol provides insufficient
Non linear permanent magnets modelling with the finite element method
International Nuclear Information System (INIS)
Chavanne, J.; Meunier, G.; Sabonnadiere, J.C.
1989-01-01
In order to perform the calculation of permanent magnets with the finite element method, it is necessary to take into account the anisotropic behaviour of hard magnetic materials (Ferrites, NdFeB, SmCo5). In linear cases, the permeability of permanent magnets is a tensor. This one is fully described with the permeabilities parallel and perpendicular to the easy axis of the magnet. In non linear cases, the model uses a texture function which represents the distribution of the local easy axis of the cristallytes of the magnet. This function allows a good representation of the angular dependance of the coercitive field of the magnet. As a result, it is possible to express the magnetic induction B and the tensor as functions of the field and the texture parameter. This model has been implemented in the software FLUX3D where the tensor is used for the Newton-Raphson procedure. 3D demagnetization of a ferrite magnet by a NdFeB magnet is a suitable representative example. They analyze the results obtained for an ideally oriented ferrite magnet and a real one using a measured texture parameter
3D finite element modelling of sheet metal blanking process
Bohdal, Lukasz; Kukielka, Leon; Chodor, Jaroslaw; Kulakowska, Agnieszka; Patyk, Radoslaw; Kaldunski, Pawel
2018-05-01
The shearing process such as the blanking of sheet metals has been used often to prepare workpieces for subsequent forming operations. The use of FEM simulation is increasing for investigation and optimizing the blanking process. In the current literature a blanking FEM simulations for the limited capability and large computational cost of the three dimensional (3D) analysis has been largely limited to two dimensional (2D) plane axis-symmetry problems. However, a significant progress in modelling which takes into account the influence of real material (e.g. microstructure of the material), physical and technological conditions can be obtained by using 3D numerical analysis methods in this area. The objective of this paper is to present 3D finite element analysis of the ductile fracture, strain distribution and stress in blanking process with the assumption geometrical and physical nonlinearities. The physical, mathematical and computer model of the process are elaborated. Dynamic effects, mechanical coupling, constitutive damage law and contact friction are taken into account. The application in ANSYS/LS-DYNA program is elaborated. The effect of the main process parameter a blanking clearance on the deformation of 1018 steel and quality of the blank's sheared edge is analyzed. The results of computer simulations can be used to forecasting quality of the final parts optimization.
FEMA: a Finite Element Model of Material Transport through Aquifers
International Nuclear Information System (INIS)
Yeh, G.T.; Huff, D.D.
1985-01-01
This report documents the construction, verification, and demonstration of a Finite Element Model of Material Transport through Aquifers (FEMA). The particular features of FEMA are its versatility and flexibility to deal with as many real-world problems as possible. Mechanisms included in FEMA are: carrier fluid advection, hydrodynamic dispersion and molecular diffusion, radioactive decay, sorption, source/sinks, and degradation due to biological, chemical as well as physical processes. Three optional sorption models are embodied in FEMA. These are linear isotherm and Freundlich and Langmuir nonlinear isotherms. Point as well as distributed source/sinks are included to represent artificial injection/withdrawals and natural infiltration of precipitation. All source/sinks can be transient or steady state. Prescribed concentration on the Dirichlet boundary, given gradient on the Neumann boundary segment, and flux at each Cauchy boundary segment can vary independently of each other. The aquifer may consist of as many formations as desired. Either completely confined or completely unconfined or partially confined and partially unconfined aquifers can be dealt with effectively. FEMA also includes transient leakage to or from the aquifer of interest through confining beds from or to aquifers lying below and/or above
Development of a finite element model for ultrasonic NDT phenomena
International Nuclear Information System (INIS)
Lord, W.
1988-01-01
Ultrasonic NDT techniques are used extensively in the nuclear industry for the detection and characterization of defects in critical structural components such as pressure vessels and piping. The feasibility of applying finite element analysis methods to the problem of modeling ultrasound/defect interactions has been shown. Considerable work remains to be done before a full three-dimensional model is available for the prediction of realistic ultrasonic transducer signals from sound wave interaction with arbitrarily shaped defects in highly attenuative and anisotropic materials. However, a two-dimensional code has been developed that is capable of predicting finite aperture ultrasonic transducer signals associated with wave propagations in isotropic materials and that shows good qualitative agreement with corresponding experimental observations. This 2-D code has now been extended to include anisotropic materials such as centrifugally cast stainless steel (CCSS), a necessary step in the development of the full 3-D code. Results are given showing the capability of the 2-D code to predict the anomalous wave behavior normally associated with ultrasonic wave propagation in anisotropic materials. In addition, a new signal processing technique is discussed, based on the Wigner transformation, that shows promise for application to centrifugally cast stainless steel NDT problems
Finite Element Modeling of Reheat Stretch Blow Molding of PET
Krishnan, Dwarak; Dupaix, Rebecca B.
2004-06-01
Poly (ethylene terephthalate) or PET is a polymer used as a packaging material for consumer products such as beverages, food or other liquids, and in other applications including drawn fibers and stretched films. Key features that make it widely used are its transparency, dimensional stability, gas impermeability, impact resistance, and high stiffness and strength in certain preferential directions. These commercially useful properties arise from the fact that PET crystallizes upon deformation above the glass transition temperature. Additionally, this strain-induced crystallization causes the deformation behavior of PET to be highly sensitive to processing conditions. It is thus crucial for engineers to be able to predict its performance at various process temperatures, strain rates and strain states so as to optimize the manufacturing process. In addressing these issues; a finite element analysis of the reheat blow molding process with PET has been carried out using ABAQUS. The simulation employed a constitutive model for PET developed by Dupaix and Boyce et al.. The model includes the combined effects of molecular orientation and strain-induced crystallization on strain hardening when the material is deformed above the glass transition temperature. The simulated bottles were also compared with actual blow molded bottles to evaluate the validity of the simulation.
FEMA: a Finite Element Model of Material Transport through Aquifers
Energy Technology Data Exchange (ETDEWEB)
Yeh, G.T.; Huff, D.D.
1985-01-01
This report documents the construction, verification, and demonstration of a Finite Element Model of Material Transport through Aquifers (FEMA). The particular features of FEMA are its versatility and flexibility to deal with as many real-world problems as possible. Mechanisms included in FEMA are: carrier fluid advection, hydrodynamic dispersion and molecular diffusion, radioactive decay, sorption, source/sinks, and degradation due to biological, chemical as well as physical processes. Three optional sorption models are embodied in FEMA. These are linear isotherm and Freundlich and Langmuir nonlinear isotherms. Point as well as distributed source/sinks are included to represent artificial injection/withdrawals and natural infiltration of precipitation. All source/sinks can be transient or steady state. Prescribed concentration on the Dirichlet boundary, given gradient on the Neumann boundary segment, and flux at each Cauchy boundary segment can vary independently of each other. The aquifer may consist of as many formations as desired. Either completely confined or completely unconfined or partially confined and partially unconfined aquifers can be dealt with effectively. FEMA also includes transient leakage to or from the aquifer of interest through confining beds from or to aquifers lying below and/or above.
Distinct Element modeling of geophysical signatures during sinkhole collapse
Al-Halbouni, Djamil; Holohan, Eoghan P.; Taheri, Abbas; Dahm, Torsten
2017-04-01
A sinkhole forms due to the collapse of rocks or soil near the Earth's surface into an underground cavity. Such cavities represent large secondary pore spaces derived by dissolution and subrosion in the underground. By changing the stress field in the surrounding material, the growth of cavities can lead to a positive feedback, in which expansion and mechanical instability in the surrounding material increases or generates new secondary pore space (e.g. by fracturing), which in turn increases the cavity size, etc. A sinkhole forms due to the eventual subsidence or collapse of the overburden that becomes destabilized and fails all the way to the Earth's surface. Both natural processes like (sub)surface water movement and earthquakes, and human activities, such as mining, construction and groundwater extraction, intensify such feedbacks. The development of models for the mechanical interaction of a growing cavity and fracturing of its surrounding material, thus capturing related precursory geophysical signatures, has been limited, however. Here we report on the advances of a general, simplified approach to simulating cavity growth and sinkhole formation by using 2D Distinct Element Modeling (DEM) PFC5.0 software and thereby constraining pre-, syn- and post-collapse geophysical and geodetic signatures. This physically realistic approach allows for spontaneous cavity development and dislocation of rock mass to be simulated by bonded particle formulation of DEM. First, we present calibration and validation of our model. Surface subsidence above an instantaneously excavated circular cavity is tracked and compared with an incrementally increasing dissolution zone both for purely elastic and non-elastic material.This validation is important for the optimal choice of model dimensions and particles size with respect to simulation time. Second, a cavity growth approach is presented and compared to a well-documented case study, the deliberately intensified sinkhole collapse at
Modeling dynamic exchange of gaseous elemental mercury at polar sunrise.
Dastoor, Ashu P; Davignon, Didier; Theys, Nicolas; Van Roozendael, Michel; Steffen, Alexandra; Ariya, Parisa A
2008-07-15
At polar sunrise, gaseous elemental mercury (GEM) undergoes an exceptional dynamic exchange in the air and at the snow surface during which GEM can be rapidly removed from the atmosphere (the so-called atmospheric mercury depletion events (AMDEs)) as well as re-emitted from the snow within a few hours to days in the Polar Regions. Although high concentrations of total mercury in snow following AMDEs is well documented, there is very little data available on the redox transformation processes of mercury in the snow and the fluxes of mercury at the air/snow interface. Therefore, the net gain of mercury in the Polar Regions as a result of AMDEs is still an open question. We developed a new version of the global mercury model, GRAHM, which includes for the first time bidirectional surface exchange of GEM in Polar Regions in spring and summer by developing schemes for mercury halogen oxidation, deposition, and re-emission. Also for the first time, GOME satellite data-derived boundary layer concentrations of BrO have been used in a global mercury model for representation of halogen mercury chemistry. Comparison of model simulated and measured atmospheric concentrations of GEM at Alert, Canada, for 3 years (2002-2004) shows the model's capability in simulating the rapid cycling of mercury during and after AMDEs. Brooks et al. (1) measured mercury deposition, reemission, and net surface gain fluxes of mercury at Barrow, AK, during an intensive measurement campaign for a 2 week period in spring (March 25 to April 7, 2003). They reported 1.7, 1.0 +/- 0.2, and 0.7 +/- 0.2 microg m(-2) deposition, re-emission, and net surface gain, respectively. Using the optimal configuration of the model, we estimated 1.8 microg m(-2) deposition, 1.0 microg m(-2) re-emission, and 0.8 microg m(-2) net surface gain of mercury for the same time period at Barrow. The estimated net annual accumulation of mercury within the Arctic Circle north of 66.5 degrees is approximately 174 t with +/-7 t of
Investigation of faulted tunnel models by combined photoelasticity and finite element analysis
International Nuclear Information System (INIS)
Ladkany, S.G.; Huang, Yuping
1994-01-01
Models of square and circular tunnels with short faults cutting through their surfaces are investigated by photoelasticity. These models, when duplicated by finite element analysis can predict the stress states of square or circular faulted tunnels adequately. Finite element analysis, using gap elements, may be used to investigate full size faulted tunnel system
Advances in 3D electromagnetic finite element modeling
International Nuclear Information System (INIS)
Nelson, E.M.
1997-01-01
Numerous advances in electromagnetic finite element analysis (FEA) have been made in recent years. The maturity of frequency domain and eigenmode calculations, and the growth of time domain applications is briefly reviewed. A high accuracy 3D electromagnetic finite element field solver employing quadratic hexahedral elements and quadratic mixed-order one-form basis functions will also be described. The solver is based on an object-oriented C++ class library. Test cases demonstrate that frequency errors less than 10 ppm can be achieved using modest workstations, and that the solutions have no contamination from spurious modes. The role of differential geometry and geometrical physics in finite element analysis is also discussed
Adaptive Smoothed Finite Elements (ASFEM) for history dependent material models
International Nuclear Information System (INIS)
Quak, W.; Boogaard, A. H. van den
2011-01-01
A successful simulation of a bulk forming process with finite elements can be difficult due to distortion of the finite elements. Nodal smoothed Finite Elements (NSFEM) are an interesting option for such a process since they show good distortion insensitivity and moreover have locking-free behavior and good computational efficiency. In this paper a method is proposed which takes advantage of the nodally smoothed field. This method, named adaptive smoothed finite elements (ASFEM), revises the mesh for every step of a simulation without mapping the history dependent material parameters. In this paper an updated-Lagrangian implementation is presented. Several examples are given to illustrate the method and to show its properties.
Sub-cellular force microscopy in single normal and cancer cells
International Nuclear Information System (INIS)
Babahosseini, H.; Carmichael, B.; Strobl, J.S.; Mahmoodi, S.N.; Agah, M.
2015-01-01
This work investigates the biomechanical properties of sub-cellular structures of breast cells using atomic force microscopy (AFM). The cells are modeled as a triple-layered structure where the Generalized Maxwell model is applied to experimental data from AFM stress-relaxation tests to extract the elastic modulus, the apparent viscosity, and the relaxation time of sub-cellular structures. The triple-layered modeling results allow for determination and comparison of the biomechanical properties of the three major sub-cellular structures between normal and cancerous cells: the up plasma membrane/actin cortex, the mid cytoplasm/nucleus, and the low nuclear/integrin sub-domains. The results reveal that the sub-domains become stiffer and significantly more viscous with depth, regardless of cell type. In addition, there is a decreasing trend in the average elastic modulus and apparent viscosity of the all corresponding sub-cellular structures from normal to cancerous cells, which becomes most remarkable in the deeper sub-domain. The presented modeling in this work constitutes a unique AFM-based experimental framework to study the biomechanics of sub-cellular structures. - Highlights: • The cells are modeled as a triple-layered structure using Generalized Maxwell model. • The sub-domains include membrane/cortex, cytoplasm/nucleus, and nuclear/integrin. • Biomechanics of corresponding sub-domains are compared among normal and cancer cells. • Viscoelasticity of sub-domains show a decreasing trend from normal to cancer cells. • The decreasing trend becomes most significant in the deeper sub-domain
Sub-cellular force microscopy in single normal and cancer cells
Energy Technology Data Exchange (ETDEWEB)
Babahosseini, H. [VT MEMS Laboratory, The Bradley Department of Electrical and Computer Engineering, Blacksburg, VA 24061 (United States); Carmichael, B. [Nonlinear Intelligent Structures Laboratory, Department of Mechanical Engineering, University of Alabama, Tuscaloosa, AL 35487-0276 (United States); Strobl, J.S. [VT MEMS Laboratory, The Bradley Department of Electrical and Computer Engineering, Blacksburg, VA 24061 (United States); Mahmoodi, S.N., E-mail: nmahmoodi@eng.ua.edu [Nonlinear Intelligent Structures Laboratory, Department of Mechanical Engineering, University of Alabama, Tuscaloosa, AL 35487-0276 (United States); Agah, M., E-mail: agah@vt.edu [VT MEMS Laboratory, The Bradley Department of Electrical and Computer Engineering, Blacksburg, VA 24061 (United States)
2015-08-07
This work investigates the biomechanical properties of sub-cellular structures of breast cells using atomic force microscopy (AFM). The cells are modeled as a triple-layered structure where the Generalized Maxwell model is applied to experimental data from AFM stress-relaxation tests to extract the elastic modulus, the apparent viscosity, and the relaxation time of sub-cellular structures. The triple-layered modeling results allow for determination and comparison of the biomechanical properties of the three major sub-cellular structures between normal and cancerous cells: the up plasma membrane/actin cortex, the mid cytoplasm/nucleus, and the low nuclear/integrin sub-domains. The results reveal that the sub-domains become stiffer and significantly more viscous with depth, regardless of cell type. In addition, there is a decreasing trend in the average elastic modulus and apparent viscosity of the all corresponding sub-cellular structures from normal to cancerous cells, which becomes most remarkable in the deeper sub-domain. The presented modeling in this work constitutes a unique AFM-based experimental framework to study the biomechanics of sub-cellular structures. - Highlights: • The cells are modeled as a triple-layered structure using Generalized Maxwell model. • The sub-domains include membrane/cortex, cytoplasm/nucleus, and nuclear/integrin. • Biomechanics of corresponding sub-domains are compared among normal and cancer cells. • Viscoelasticity of sub-domains show a decreasing trend from normal to cancer cells. • The decreasing trend becomes most significant in the deeper sub-domain.
Lichen Parmelia sulcata time response model to environmental elemental availability
International Nuclear Information System (INIS)
Reis, M.A.; Alves, L.C.; Freitas, M.C.; Os, B. van; Wolterbeek, H.Th.
2000-01-01
Transplants of lichen Parmelia sulcata collected in an area previously identified as non polluted, were placed at six stations, five of which were near Power Plants and the other in an area expected to be a remote station. Together with the lichen transplants, two total deposition collection buckets and an aerosol sampler were installed. Lichens were recollected two every month from each station. At the same time the water collection buckets were replaced by new ones. The aerosol sampler filter was replaced every week, collection being effective only for 10 minutes out of every two hours; in the remote station aerosol filters were replaced only once a month, the collection rate being kept. Each station was run for a period of one year. Both lichens and aerosol filters were analysed by PIXE and INAA at ITN. Total deposition samples were dried under an infrared lamp, and afterwards acid digested and analysed by ICP-MS at the National Geological Survey of The Netherlands. Data for the three types of samples were then produced for a total of 16 elements. In this work we used the data set thus obtained to test a model for the time response of lichen Parmelia sulcata to a new environment. (author)
Finite element modeling of AP1000 nuclear island
International Nuclear Information System (INIS)
Tinic, S.; Orr, R.
2003-01-01
The AP1000 is a standard design developed by Westinghouse and its partners for an advanced nuclear power plant utilizing passive safety features. It is based on the certified design of the AP600 and has been uprated to 1000 MWe. The plant has five principal building structures; the nuclear island, the turbine building; the annex building; the diesel generator building and the radwaste building. The nuclear island consists of the containment building (the steel containment vessel and the containment internal structures), the shield building, and the auxiliary building. These structures are founded on a common basemat and are collectively known as the nuclear island. This paper describes use of the general purpose finite element program ANSYS [2] in structural analyses and qualification of the AP1000 nuclear island buildings. It describes the modeling of the shield building and the auxiliary building and the series of analyses and the flow of information from the global analyses to the detailed analyses and building qualification. (author)
Finite-element method modeling of hyper-frequency structures
International Nuclear Information System (INIS)
Zhang, Min
1990-01-01
The modelization of microwave propagation problems, including Eigen-value problem and scattering problem, is accomplished by the finite element method with vector functional and scalar functional. For Eigen-value problem, propagation modes in waveguides and resonant modes in cavities can be calculated in a arbitrarily-shaped structure with inhomogeneous material. Several microwave structures are resolved in order to verify the program. One drawback associated with the vector functional is the appearance of spurious or non-physical solutions. A penalty function method has been introduced to reduce spurious' solutions. The adaptive charge method is originally proposed in this thesis to resolve waveguide scattering problem. This method, similar to VSWR measuring technique, is more efficient to obtain the reflection coefficient than the matrix method. Two waveguide discontinuity structures are calculated by the two methods and their results are compared. The adaptive charge method is also applied to a microwave plasma excitor. It allows us to understand the role of different physical parameters of excitor in the coupling of microwave energy to plasma mode and the mode without plasma. (author) [fr
Finite Element Modelling of Seismic Liquefaction in Soils
Galavi, V.; Petalas, A.; Brinkgreve, R.B.J.
2013-01-01
Numerical aspects of seismic liquefaction in soils as implemented in the finite element code, PLAXIS, is described in this paper. After description of finite element equations of dynamic problems, three practical dynamic boundary conditions, namely viscous boundary tractions, tied degrees of freedom
Modelling Convergence of Finite Element Analysis of Cantilever Beam
African Journals Online (AJOL)
Convergence studies are carried out by investigating the convergence of numerical results as the number of elements is increased. If convergence is not obtained, the engineer using the finite element method has absolutely no indication whether the results are indicative of a meaningful approximation to the correct solution ...
A cohesive finite element formulation for modelling fracture and ...
Indian Academy of Sciences (India)
cohesive elements experience material softening and lose their stress carrying capacity. A few simple ..... In the present work, a Lagrangian finite element procedure is employed. In this formu clation ...... o, is related to 'c o by,. 't o='c o ¼ 1 ہ. 1.
Probabilistic models for access strategies to dynamic information elements
DEFF Research Database (Denmark)
Hansen, Martin Bøgsted; Olsen, Rasmus L.; Schwefel, Hans-Peter
In various network services (e.g., routing and instances of context-sensitive networking) remote access to dynamically changing information elements is a required functionality. Three fundamentally different strategies for such access are investigated in this paper: (1) a reactive approach...... initiated by the requesting entity, and two versions of proactive approaches in which the entity that contains the information element actively propagates its changes to potential requesters, either (2) periodically or (3) triggered by changes of the information element. This paper develops probabilistic...... for information elements spread over a large number of network nodes are provided, which allow to draw conclusions on scalability properties. The impact of different distribution types for the network delays as well as for the time between changes of the information element on the mismatch probability...
Finite element modeling of multilayered structures of fish scales.
Chandler, Mei Qiang; Allison, Paul G; Rodriguez, Rogie I; Moser, Robert D; Kennedy, Alan J
2014-12-01
The interlinked fish scales of Atractosteus spatula (alligator gar) and Polypterus senegalus (gray and albino bichir) are effective multilayered armor systems for protecting fish from threats such as aggressive conspecific interactions or predation. Both types of fish scales have multi-layered structures with a harder and stiffer outer layer, and softer and more compliant inner layers. However, there are differences in relative layer thickness, property mismatch between layers, the property gradations and nanostructures in each layer. The fracture paths and patterns of both scales under microindentation loads were different. In this work, finite element models of fish scales of A. spatula and P. senegalus were built to investigate the mechanics of their multi-layered structures under penetration loads. The models simulate a rigid microindenter penetrating the fish scales quasi-statically to understand the observed experimental results. Study results indicate that the different fracture patterns and crack paths observed in the experiments were related to the different stress fields caused by the differences in layer thickness, and spatial distribution of the elastic and plastic properties in the layers, and the differences in interface properties. The parametric studies and experimental results suggest that smaller fish such as P. senegalus may have adopted a thinner outer layer for light-weighting and improved mobility, and meanwhile adopted higher strength and higher modulus at the outer layer, and stronger interface properties to prevent ring cracking and interface cracking, and larger fish such as A. spatula and Arapaima gigas have lower strength and lower modulus at the outer layers and weaker interface properties, but have adopted thicker outer layers to provide adequate protection against ring cracking and interface cracking, possibly because weight is less of a concern relative to the smaller fish such as P. senegalus. Published by Elsevier Ltd.
A discrete finite element modelling and measurements for powder compaction
International Nuclear Information System (INIS)
Choi, J L; Gethin, D T
2009-01-01
An experimental investigation into friction between powder and a target surface together with numerical modelling of compaction and friction processes at a micro-scale are presented in this paper. The experimental work explores friction mechanisms by using an extended sliding plate apparatus operating at low load while sliding over a long distance. Tests were conducted for copper and 316 steel with variation in loads, surface finish and its orientation. The behaviours of the static and dynamic friction were identified highlighting the important influence of particle size, particle shape, material response and surface topography. The results also highlighted that under light loading the friction coefficient remains at a level lower than that derived from experiments on equipment having a wider dynamic range and this is attributed to the enhanced sensitivity of the measurement equipment. The results also suggest that friction variation with sliding distance is a consequence of damage, rather than presentation of an uncontaminated target sliding surface. The complete experimental cycle was modelled numerically using a combined discrete and finite element scheme enabling exploration of mechanisms that are defined at the particle level. Using compaction as the starting point, a number of simulation factors and process parameters were investigated. Comparisons were made with previously published work, showing reasonable agreement and the simulations were then used to explore the process response to the range of particle scale factors. Models comprising regular packing of round particles exhibited stiff response with high initial density. Models with random packing were explored and were found to reflect trends that are more closely aligned with experimental observation, including rearrangement, followed by compaction under a regime of elastic then plastic deformation. Numerical modelling of the compaction stage was extended to account for the shearing stage of the
Rehman, Asad; Ali, Ishtiaq; Qamar, Shamsul
An upwind space-time conservation element and solution element (CE/SE) scheme is extended to numerically approximate the dusty gas flow model. Unlike central CE/SE schemes, the current method uses the upwind procedure to derive the numerical fluxes through the inner boundary of conservation elements. These upwind fluxes are utilized to calculate the gradients of flow variables. For comparison and validation, the central upwind scheme is also applied to solve the same dusty gas flow model. The suggested upwind CE/SE scheme resolves the contact discontinuities more effectively and preserves the positivity of flow variables in low density flows. Several case studies are considered and the results of upwind CE/SE are compared with the solutions of central upwind scheme. The numerical results show better performance of the upwind CE/SE method as compared to the central upwind scheme.
Directory of Open Access Journals (Sweden)
Asad Rehman
Full Text Available An upwind space-time conservation element and solution element (CE/SE scheme is extended to numerically approximate the dusty gas flow model. Unlike central CE/SE schemes, the current method uses the upwind procedure to derive the numerical fluxes through the inner boundary of conservation elements. These upwind fluxes are utilized to calculate the gradients of flow variables. For comparison and validation, the central upwind scheme is also applied to solve the same dusty gas flow model. The suggested upwind CE/SE scheme resolves the contact discontinuities more effectively and preserves the positivity of flow variables in low density flows. Several case studies are considered and the results of upwind CE/SE are compared with the solutions of central upwind scheme. The numerical results show better performance of the upwind CE/SE method as compared to the central upwind scheme. Keywords: Dusty gas flow, Solid particles, Upwind schemes, Rarefaction wave, Shock wave, Contact discontinuity
Use of the iterative solution method for coupled finite element and boundary element modeling
International Nuclear Information System (INIS)
Koteras, J.R.
1993-07-01
Tunnels buried deep within the earth constitute an important class geomechanics problems. Two numerical techniques used for the analysis of geomechanics problems, the finite element method and the boundary element method, have complementary characteristics for applications to problems of this type. The usefulness of combining these two methods for use as a geomechanics analysis tool has been recognized for some time, and a number of coupling techniques have been proposed. However, not all of them lend themselves to efficient computational implementations for large-scale problems. This report examines a coupling technique that can form the basis for an efficient analysis tool for large scale geomechanics problems through the use of an iterative equation solver
Finite-Element Modeling of Timber Joints with Punched Metal Plate Fasteners
DEFF Research Database (Denmark)
Ellegaard, Peter
2006-01-01
The focus of this paper is to describe the idea and the theory behind a finite-element model developed for analysis of timber trusses with punched metal plate fasteners (nail plates). The finite-element model includes the semirigid and nonlinear behavior of the joints (nonlinear nail and plate...... elements) and contact between timber beams, if any (bilinear contact elements). The timber beams have linear-elastic properties. The section forces needed for design of the joints are given directly by the finite-element model, since special elements are used to model the nail groups and the nail plate...... the behavior of the joints very well at lower load levels. At higher load levels the stiffness is overestimated due to development of cracks in the timber and the linear-elastic timber properties in the finite-element model....
International Nuclear Information System (INIS)
Rousseau, J.
2009-07-01
That study focuses on concrete structures submitted to impact loading and is aimed at predicting local damage in the vicinity of an impact zone as well as the global response of the structure. The Discrete Element Method (DEM) seems particularly well suited in this context for modeling fractures. An identification process of DEM material parameters from macroscopic data (Young's modulus, compressive and tensile strength, fracture energy, etc.) will first be presented for the purpose of enhancing reproducibility and reliability of the simulation results with DE samples of various sizes. Then, a particular interaction, between concrete and steel elements, was developed for the simulation of reinforced concrete. The discrete elements method was validated on quasi-static and dynamic tests carried out on small samples of concrete and reinforced concrete. Finally, discrete elements were used to simulate impacts on reinforced concrete slabs in order to confront the results with experimental tests. The modeling of a large structure by means of DEM may lead to prohibitive computation times. A refined discretization becomes required in the vicinity of the impact, while the structure may be modeled using a coarse FE mesh further from the impact area, where the material behaves elastically. A coupled discrete-finite element approach is thus proposed: the impact zone is modeled by means of DE and elastic FE are used on the rest of the structure. An existing method for 3D finite elements was extended to shells. This new method was then validated on many quasi-static and dynamic tests. The proposed approach is then applied to an impact on a concrete structure in order to validate the coupled method and compare computation times. (author)
Particle models for discrete element modeling of bulk grain properties of wheat kernels
Recent research has shown the potential of discrete element method (DEM) in simulating grain flow in bulk handling systems. Research has also revealed that simulation of grain flow with DEM requires establishment of appropriate particle models for each grain type. This research completes the three-p...
Finite element model to study calcium distribution in oocytes ...
African Journals Online (AJOL)
Parvaiz Ahmad Naik
2015-03-20
Mar 20, 2015 ... Department of Mathematics, Maulana Azad National Institute of Technology, Bhopal 462051 ... finite element method has been employed to obtain the solution. ..... Nelson MT, Cheng H, Rubart M. Relaxation of arterial smooth.
Model studying the processes arising during fuel element overheating
International Nuclear Information System (INIS)
Usynin, G.B.; Anoshkin, Yu.I.; Vlasichev, G.N.; Galitskikh, Yu.N.; Semenychev, M.A.
1986-01-01
A calculational technique for studying heating and melting of fuel elements in the BN type reactors during an accident with heat release failure and a simulator with central rod heater intended for out-of-pile experiments is developed. The time rangeof the characteristic melting steps for the most thermally stressed fuel element at the reactor nominal power is calculated. The experimental study of the fuel element melting using a simulator with a tungsten heater has proved that the technique for the simultor and fuel can melting, respectively, is correct. The developed technique is used for determining the geometrical values and operational conditions for experiments with simulators, when quantitative and qualitative characteristics of the process under study are rather close to those natural for fuel elements
A Kriging Model Based Finite Element Model Updating Method for Damage Detection
Directory of Open Access Journals (Sweden)
Xiuming Yang
2017-10-01
Full Text Available Model updating is an effective means of damage identification and surrogate modeling has attracted considerable attention for saving computational cost in finite element (FE model updating, especially for large-scale structures. In this context, a surrogate model of frequency is normally constructed for damage identification, while the frequency response function (FRF is rarely used as it usually changes dramatically with updating parameters. This paper presents a new surrogate model based model updating method taking advantage of the measured FRFs. The Frequency Domain Assurance Criterion (FDAC is used to build the objective function, whose nonlinear response surface is constructed by the Kriging model. Then, the efficient global optimization (EGO algorithm is introduced to get the model updating results. The proposed method has good accuracy and robustness, which have been verified by a numerical simulation of a cantilever and experimental test data of a laboratory three-story structure.
A short summary on finite element modelling of fatigue crack closure
Energy Technology Data Exchange (ETDEWEB)
Singh, Konjengbam Darunkumar [Indian Institute of Technology, Guwahati (India); Parry, Matthew Roger [Airbus Operations Ltd, Bristol(United Kingdom); Sinclair, Ian [University of Southampton, Southampton (United Kingdom)
2011-12-15
This paper presents a short summary pertaining to the finite element modelling of fatigue crack closure. Several key issues related to finite element modelling of fatigue crack closure are highlighted: element type, mesh refinement, stabilization of crack closure, crack-tip node release scheme, constitutive model, specimen geometry, stress-states (i.e., plane stress, plane strain), crack closure monitoring. Reviews are presented for both straight and deflected cracks.
Discrete element modeling of deformable particles in YADE
Directory of Open Access Journals (Sweden)
Martin Haustein
2017-01-01
Full Text Available In this paper we describe the open-source discrete element framework YADE and the implementation of a new deformation engine. YADE is a highly expandable software package that allows the simulation of current industrial problems in the field of granular materials using particle-based numerical methods. The description of the compaction of powders and granular material like metal pellets is now possible with a pure and simple discrete element approach in a modern DEM-framework. The deformation is realized by expanding the radius of the spherical particles, depending on their overlap, so that the volume of the material is kept constant.
Ageing evaluation model of nuclear reactors structural elements
International Nuclear Information System (INIS)
Ziliukas, A.; Jutas, A.; Leisis, V.
2002-01-01
In this article the estimation of non-failure probability by random faults on the structural elements of nuclear reactors is presented. Ageing is certainly a significant factor in determining the limits of nuclear plant lifetime or life extensions. Usually the non failure probability rates failure intensity, which is characteristic for structural elements ageing in nuclear reactors. In practice the reliability is increased incorrectly because not all failures are fixed and cumulated. Therefore, the methodology with using the fine parameter of the failures flow is described. The comparison of non failure probability and failures flow is carried out. The calculation of these parameters in the practical example is shown too. (author)
Modeling of parasitic elements in high voltage multiplier modules
Wang, J.
2014-01-01
It is an inevitable trend that the power conversion module will have higher switching frequency and smaller volume in the future. Bandgap devices, such as SiC and GaN devices, accelerate the process. With this process, the parasitic elements in the module will probably have stronger influence on
Lichens (Parmelia sulcata) time response model to environmental elemental availability
Reis, M.A.; Alves, L.C.; Freitas, M.C.; Os, B. van; Wolterbeek, H.T.
1999-01-01
Parmelia sulcata transplants, collected in a non-polluted area, were exposed to new atmospheric conditions at six stations, of which five were located near power plants and one at an unpolluted area. Data were collected for a 1-year period, on rainfall, airborne particulates, elemental deposition
Can finite element models detect clinically inferior cemented hip implants?
Stolk, J.; Maher, S.A.; Verdonschot, N.J.J.; Prendergast, P.J.; Huiskes, R.
2003-01-01
Rigorous preclinical testing of cemented hip prostheses against the damage accumulation failure scenario will reduce the incidence of aseptic loosening. For that purpose, a finite element simulation is proposed that predicts damage accumulation in the cement mantle and prosthetic migration. If the
Zhou, Xunfei; Hsieh, Sheng-Jen
2017-05-01
After years of development, Fused Deposition Modeling (FDM) has become the most popular technique in commercial 3D printing due to its cost effectiveness and easy-to-operate fabrication process. Mechanical strength and dimensional accuracy are two of the most important factors for reliability of FDM products. However, the solid-liquid-solid state changes of material in the FDM process make it difficult to monitor and model. In this paper, an experimental model was developed to apply cost-effective infrared thermography imaging method to acquire temperature history of filaments at the interface and their corresponding cooling mechanism. A three-dimensional finite element model was constructed to simulate the same process using element "birth and death" feature and validated with the thermal response from the experimental model. In 6 of 9 experimental conditions, a maximum of 13% difference existed between the experimental and numerical models. This work suggests that numerical modeling of FDM process is reliable and can facilitate better understanding of bead spreading and road-to-road bonding mechanics during fabrication.
Analysis of pipe mitred bends using beam models - by finite element method
International Nuclear Information System (INIS)
Salles, A.C.S.L. de.
1984-01-01
The formulation of a recently proposed displacement based straight pipe element for the analysis of pipe mitred bends is summarized in this work. The element kinematics includes axial, bending, torsional and ovalisation displacements, all varying cubically along the axis of the element. Interaction effects between angle adjoined straight pipe section are modeled including the appropriate additional strain terms in the stiffness matrix formulation and by using a penalty procedure to enforce continuity of pipe skin flexural rotations at the common helical edge. The element model capabilities are ilustrated in some sample analysis and the results are compared with other available experimental, analytical or more complex numerical models. (Author) [pt
Mathematical model of thermal and mechanical steady state fuel element behaviour TEDEF
International Nuclear Information System (INIS)
Dinic, N.; Kostic, Z.; Josipovic, M.
1987-01-01
In this paper a numerical model of thermal and thermomechanical behaviour of a cylindrical metal uranium fuel element is described. Presented are numerical method and computer program for solving the stationary temperature field and thermal stresses of a fuel element. The model development is a second phase of analysis of these phenomena, and may as well be used for analysing power nuclear reactor fuel elements behaviour. (author)
Subcellular site and nature of intracellular cadmium in plants
International Nuclear Information System (INIS)
Wagner, G.J.
1979-01-01
The mechanisms underlying heavy metal accumulation, toxicity, and tolerance in higher plants are poorly understood. Since subcellular processes are undoubtedly involved in all these phenomena, it is of interest to study the extent, subcellular site and nature of intracellularly accumulated cadmium in higher plants. Whole plants supplied 109 CdCl 2 or 112 CdSO 4 accumulated Cd into roots and aerial tissues. Preparation of protoplasts from aerial tissues followed by subcellular fractionation of the protoplasts to obtain intact vacuoles, chloroplasts and cytosol revealed the presence of Cd in the cytosol but not in vacuoles or chloroplasts. No evidence was obtained for the production of volatile Cd complexes in tobacco
Seismic analysis of the APR1400 nuclear reactor system using a verified beam element model
International Nuclear Information System (INIS)
Park, Jong-beom; Park, No-Cheol; Lee, Sang-Jeong; Park, Young-Pil; Choi, Youngin
2017-01-01
Highlights: • A simplified beam element model is constructed based on the real dynamic characteristics of the APR1400. • Time history analysis is performed to calculate the seismic responses of the structures. • Large deformations can be observed at the in-phase mode of reactor vessel and core support barrel. - Abstract: Structural integrity is the first priority in the design of nuclear reactor internal structures. In particular, nuclear reactor internals should be designed to endure external forces, such as those due to earthquakes. Many researchers have performed finite element analyses to meet these design requirements. Generally, a seismic analysis model should reflect the dynamic characteristics of the target system. However, seismic analysis based on the finite element method requires long computation times as well as huge storage space. In this research, a beam element model was developed and confirmed based on the real dynamic characteristics of an advanced pressurized water nuclear reactor 1400 (APR1400) system. That verification process enhances the accuracy of the finite element analysis using the beam elements, remarkably. Also, the beam element model reduces seismic analysis costs. Therefore, the beam element model was used to perform the seismic analysis. Then, the safety of the APR1400 was assessed based on a seismic analysis of the time history responses of its structures. Thus, efficient, accurate seismic analysis was demonstrated using the proposed beam element model.
Seismic analysis of the APR1400 nuclear reactor system using a verified beam element model
Energy Technology Data Exchange (ETDEWEB)
Park, Jong-beom [Department of Mechanical Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722 (Korea, Republic of); Park, No-Cheol, E-mail: pnch@yonsei.ac.kr [Department of Mechanical Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722 (Korea, Republic of); Lee, Sang-Jeong; Park, Young-Pil [Department of Mechanical Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722 (Korea, Republic of); Choi, Youngin [Korea Institute of Nuclear Safety, 62 Gwahak-ro, Yuseong-gu, Daejeon 34142 (Korea, Republic of)
2017-03-15
Highlights: • A simplified beam element model is constructed based on the real dynamic characteristics of the APR1400. • Time history analysis is performed to calculate the seismic responses of the structures. • Large deformations can be observed at the in-phase mode of reactor vessel and core support barrel. - Abstract: Structural integrity is the first priority in the design of nuclear reactor internal structures. In particular, nuclear reactor internals should be designed to endure external forces, such as those due to earthquakes. Many researchers have performed finite element analyses to meet these design requirements. Generally, a seismic analysis model should reflect the dynamic characteristics of the target system. However, seismic analysis based on the finite element method requires long computation times as well as huge storage space. In this research, a beam element model was developed and confirmed based on the real dynamic characteristics of an advanced pressurized water nuclear reactor 1400 (APR1400) system. That verification process enhances the accuracy of the finite element analysis using the beam elements, remarkably. Also, the beam element model reduces seismic analysis costs. Therefore, the beam element model was used to perform the seismic analysis. Then, the safety of the APR1400 was assessed based on a seismic analysis of the time history responses of its structures. Thus, efficient, accurate seismic analysis was demonstrated using the proposed beam element model.
Material model for non-linear finite element analyses of large concrete structures
Engen, Morten; Hendriks, M.A.N.; Øverli, Jan Arve; Åldstedt, Erik; Beushausen, H.
2016-01-01
A fully triaxial material model for concrete was implemented in a commercial finite element code. The only required input parameter was the cylinder compressive strength. The material model was suitable for non-linear finite element analyses of large concrete structures. The importance of including
Modeling and Simulation of a Nuclear Fuel Element Test Section
Moran, Robert P.; Emrich, William
2011-01-01
"The Nuclear Thermal Rocket Element Environmental Simulator" test section closely simulates the internal operating conditions of a thermal nuclear rocket. The purpose of testing is to determine the ideal fuel rod characteristics for optimum thermal heat transfer to their hydrogen cooling/working fluid while still maintaining fuel rod structural integrity. Working fluid exhaust temperatures of up to 5,000 degrees Fahrenheit can be encountered. The exhaust gas is rendered inert and massively reduced in temperature for analysis using a combination of water cooling channels and cool N2 gas injectors in the H2-N2 mixer portion of the test section. An extensive thermal fluid analysis was performed in support of the engineering design of the H2-N2 mixer in order to determine the maximum "mass flow rate"-"operating temperature" curve of the fuel elements hydrogen exhaust gas based on the test facilities available cooling N2 mass flow rate as the limiting factor.
Ning, Zengping; He, Libin; Xiao, Tangfu; Márton, László
2015-01-01
The accumulation of thallium (Tl) in brassicaceous crops is widely known, but both the uptake extents of Tl by the individual cultivars of green cabbage and the distribution of Tl in the tissues of green cabbage are not well understood. Five commonly available cultivars of green cabbage grown in the Tl-spiked pot-culture trials were studied for the uptake extent and subcellular distribution of Tl. The results showed that all the trial cultivars mainly concentrated Tl in the leaves (101∼192 mg/kg, DW) rather than in the roots or stems, with no significant differences among cultivars (p = 0.455). Tl accumulation in the leaves revealed obvious subcellular fractionation: cell cytosol and vacuole > cell wall > cell organelles. The majority (∼ 88%) of leaf-Tl was found to be in the fraction of cytosol and vacuole, which also served as the major storage site for other major elements such as Ca and Mg. This specific subcellular fractionation of Tl appeared to enable green cabbage to avoid Tl damage to its vital organelles and to help green cabbage tolerate and detoxify Tl. This study demonstrated that all the five green cabbage cultivars show a good application potential in the phytoremediation of Tl-contaminated soils.
An effective finite element model for the prediction of hydrogen induced cracking in steel pipelines
Traidia, Abderrazak; Alfano, Marco; Lubineau, Gilles; Duval, Sé bastien; Sherik, Abdelmounam M.
2012-01-01
This paper presents a comprehensive finite element model for the numerical simulation of Hydrogen Induced Cracking (HIC) in steel pipelines exposed to sulphurous compounds, such as hydrogen sulphide (H2S). The model is able to mimic the pressure
Finite element modelling and updating of friction stir welding (FSW joint for vibration analysis
Directory of Open Access Journals (Sweden)
Zahari Siti Norazila
2017-01-01
Full Text Available Friction stir welding of aluminium alloys widely used in automotive and aerospace application due to its advanced and lightweight properties. The behaviour of FSW joints plays a significant role in the dynamic characteristic of the structure due to its complexities and uncertainties therefore the representation of an accurate finite element model of these joints become a research issue. In this paper, various finite elements (FE modelling technique for prediction of dynamic properties of sheet metal jointed by friction stir welding will be presented. Firstly, nine set of flat plate with different series of aluminium alloy; AA7075 and AA6061 joined by FSW are used. Nine set of specimen was fabricated using various types of welding parameters. In order to find the most optimum set of FSW plate, the finite element model using equivalence technique was developed and the model validated using experimental modal analysis (EMA on nine set of specimen and finite element analysis (FEA. Three types of modelling were engaged in this study; rigid body element Type 2 (RBE2, bar element (CBAR and spot weld element connector (CWELD. CBAR element was chosen to represent weld model for FSW joints due to its accurate prediction of mode shapes and contains an updating parameter for weld modelling compare to other weld modelling. Model updating was performed to improve correlation between EMA and FEA and before proceeds to updating, sensitivity analysis was done to select the most sensitive updating parameter. After perform model updating, total error of the natural frequencies for CBAR model is improved significantly. Therefore, CBAR element was selected as the most reliable element in FE to represent FSW weld joint.
Finite element modeling of a 3D coupled foot-boot model.
Qiu, Tian-Xia; Teo, Ee-Chon; Yan, Ya-Bo; Lei, Wei
2011-12-01
Increasingly, musculoskeletal models of the human body are used as powerful tools to study biological structures. The lower limb, and in particular the foot, is of interest because it is the primary physical interaction between the body and the environment during locomotion. The goal of this paper is to adopt the finite element (FE) modeling and analysis approaches to create a state-of-the-art 3D coupled foot-boot model for future studies on biomechanical investigation of stress injury mechanism, foot wear design and parachute landing fall simulation. In the modeling process, the foot-ankle model with lower leg was developed based on Computed Tomography (CT) images using ScanIP, Surfacer and ANSYS. Then, the boot was represented by assembling the FE models of upper, insole, midsole and outsole built based on the FE model of the foot-ankle, and finally the coupled foot-boot model was generated by putting together the models of the lower limb and boot. In this study, the FE model of foot and ankle was validated during balance standing. There was a good agreement in the overall patterns of predicted and measured plantar pressure distribution published in literature. The coupled foot-boot model will be fully validated in the subsequent works under both static and dynamic loading conditions for further studies on injuries investigation in military and sports, foot wear design and characteristics of parachute landing impact in military. Copyright © 2011 IPEM. Published by Elsevier Ltd. All rights reserved.
Rahimi Dalkhani, Amin; Javaherian, Abdolrahim; Mahdavi Basir, Hadi
2018-04-01
Wave propagation modeling as a vital tool in seismology can be done via several different numerical methods among them are finite-difference, finite-element, and spectral-element methods (FDM, FEM and SEM). Some advanced applications in seismic exploration benefit the frequency domain modeling. Regarding flexibility in complex geological models and dealing with the free surface boundary condition, we studied the frequency domain acoustic wave equation using FEM and SEM. The results demonstrated that the frequency domain FEM and SEM have a good accuracy and numerical efficiency with the second order interpolation polynomials. Furthermore, we developed the second order Clayton and Engquist absorbing boundary condition (CE-ABC2) and compared it with the perfectly matched layer (PML) for the frequency domain FEM and SEM. In spite of PML method, CE-ABC2 does not add any additional computational cost to the modeling except assembling boundary matrices. As a result, considering CE-ABC2 is more efficient than PML for the frequency domain acoustic wave propagation modeling especially when computational cost is high and high-level absorbing performance is unnecessary.
Finite element model updating in structural dynamics using design sensitivity and optimisation
Calvi, Adriano
1998-01-01
Model updating is an important issue in engineering. In fact a well-correlated model provides for accurate evaluation of the structure loads and responses. The main objectives of the study were to exploit available optimisation programs to create an error localisation and updating procedure of nite element models that minimises the "error" between experimental and analytical modal data, addressing in particular the updating of large scale nite element models with se...
Monoterpene biosynthesis potential of plant subcellular compartments.
Dong, Lemeng; Jongedijk, Esmer; Bouwmeester, Harro; Van Der Krol, Alexander
2016-01-01
Subcellular monoterpene biosynthesis capacity based on local geranyl diphosphate (GDP) availability or locally boosted GDP production was determined for plastids, cytosol and mitochondria. A geraniol synthase (GES) was targeted to plastids, cytosol, or mitochondria. Transient expression in Nicotiana benthamiana indicated local GDP availability for each compartment but resulted in different product levels. A GDP synthase from Picea abies (PaGDPS1) was shown to boost GDP production. PaGDPS1 was also targeted to plastids, cytosol or mitochondria and PaGDPS1 and GES were coexpressed in all possible combinations. Geraniol and geraniol-derived products were analyzed by GC-MS and LC-MS, respectively. GES product levels were highest for plastid-targeted GES, followed by mitochondrial- and then cytosolic-targeted GES. For each compartment local boosting of GDP biosynthesis increased GES product levels. GDP exchange between compartments is not equal: while no GDP is exchanged from the cytosol to the plastids, 100% of GDP in mitochondria can be exchanged to plastids, while only 7% of GDP from plastids is available for mitochondria. This suggests a direct exchange mechanism for GDP between plastids and mitochondria. Cytosolic PaGDPS1 competes with plastidial GES activity, suggesting an effective drain of isopentenyl diphosphate from the plastids to the cytosol. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.
Tau regulates the subcellular localization of calmodulin
Energy Technology Data Exchange (ETDEWEB)
Barreda, Elena Gomez de [Centro de Biologia Molecular ' Severo Ochoa' , CSIC/UAM, Universidad Autonoma de Madrid, Cantoblanco, 28049 Madrid (Spain); Avila, Jesus, E-mail: javila@cbm.uam.es [Centro de Biologia Molecular ' Severo Ochoa' , CSIC/UAM, Universidad Autonoma de Madrid, Cantoblanco, 28049 Madrid (Spain); CIBER de Enfermedades Neurodegenerativas, 28031 Madrid (Spain)
2011-05-13
Highlights: {yields} In this work we have tried to explain how a cytoplasmic protein could regulate a cell nuclear function. We have tested the role of a cytoplasmic protein (tau) in regulating the expression of calbindin gene. We found that calmodulin, a tau-binding protein with nuclear and cytoplasmic localization, increases its nuclear localization in the absence of tau. Since nuclear calmodulin regulates calbindin expression, a decrease in nuclear calmodulin, due to the presence of tau that retains it at the cytoplasm, results in a change in calbindin expression. -- Abstract: Lack of tau expression in neuronal cells results in a change in the expression of few genes. However, little is known about how tau regulates gene expression. Here we show that the presence of tau could alter the subcellular localization of calmodulin, a protein that could be located at the cytoplasm or in the nucleus. Nuclear calmodulin binds to co-transcription factors, regulating the expression of genes like calbindin. In this work, we have found that in neurons containing tau, a higher proportion of calmodulin is present in the cytoplasm compared with neurons lacking tau and that an increase in cytoplasmic calmodulin correlates with a higher expression of calbindin.
Tau regulates the subcellular localization of calmodulin
International Nuclear Information System (INIS)
Barreda, Elena Gomez de; Avila, Jesus
2011-01-01
Highlights: → In this work we have tried to explain how a cytoplasmic protein could regulate a cell nuclear function. We have tested the role of a cytoplasmic protein (tau) in regulating the expression of calbindin gene. We found that calmodulin, a tau-binding protein with nuclear and cytoplasmic localization, increases its nuclear localization in the absence of tau. Since nuclear calmodulin regulates calbindin expression, a decrease in nuclear calmodulin, due to the presence of tau that retains it at the cytoplasm, results in a change in calbindin expression. -- Abstract: Lack of tau expression in neuronal cells results in a change in the expression of few genes. However, little is known about how tau regulates gene expression. Here we show that the presence of tau could alter the subcellular localization of calmodulin, a protein that could be located at the cytoplasm or in the nucleus. Nuclear calmodulin binds to co-transcription factors, regulating the expression of genes like calbindin. In this work, we have found that in neurons containing tau, a higher proportion of calmodulin is present in the cytoplasm compared with neurons lacking tau and that an increase in cytoplasmic calmodulin correlates with a higher expression of calbindin.
International Nuclear Information System (INIS)
Muto, K.; Motosaka, M.; Kamata, M.; Masuda, K.; Urao, K.; Mameda, T.
1985-01-01
In order to investigate the 3-dimensional earthquake response characteristics of an embedded structure with consideration for soil-structure interaction, the authors have developed an analytical method using 3-dimensional hybrid model of boundary elements (BEM) and finite elements (FEM) and have conducted a dynamic analysis of an actual nuclear reactor building. This paper describes a comparative study between two different embedment depths in soil as elastic half-space. As the results, it was found that the earthquake response intensity decreases with the increase of the embedment depth and that this method was confirmed to be effective for investigating the 3-D response characteristics of embedded structures such as deflection pattern of each floor level, floor response spectra in high frequency range. (orig.)
Directory of Open Access Journals (Sweden)
Jelena Jovanović
2010-03-01
Full Text Available The research is oriented on improvement of environmental management system (EMS using BSC (Balanced Scorecard model that presents strategic model of measurem ents and improvement of organisational performance. The research will present approach of objectives and environmental management me trics involvement (proposed by literature review in conventional BSC in "Ad Barska plovi dba" organisation. Further we will test creation of ECO-BSC model based on business activities of non-profit organisations in order to improve envir onmental management system in parallel with other systems of management. Using this approach we may obtain 4 models of BSC that includ es elements of environmen tal management system for AD "Barska plovidba". Taking into acc ount that implementation and evaluation need long period of time in AD "Barska plovidba", the final choice will be based on 14598 (Information technology - Software product evaluation and ISO 9126 (Software engineering - Product quality using AHP method. Those standards are usually used for evaluation of quality software product and computer programs that serve in organisation as support and factors for development. So, AHP model will be bas ed on evolution criteria based on suggestion of ISO 9126 standards and types of evaluation from two evaluation teams. Members of team & will be experts in BSC and environmental management system that are not em ployed in AD "Barska Plovidba" organisation. The members of team 2 will be managers of AD "Barska Plovidba" organisation (including manage rs from environmental department. Merging results based on previously cr eated two AHP models, one can obtain the most appropriate BSC that includes elements of environmental management system. The chosen model will present at the same time suggestion for approach choice including ecological metrics in conventional BSC model for firm that has at least one ECO strategic orientation.
Advancements in the behavioral modeling of fuel elements and related structures
International Nuclear Information System (INIS)
Billone, M.C.; Montgomery, R.O.; Rashid, Y.R.; Head, J.L.
1989-01-01
An important aspect of the design and analysis of nuclear reactors is the ability to predict the behavior of fuel elements in the adverse environment of a reactor system. By understanding the thermomechanical behavior of the different materials which constitute a nuclear fuel element, analysis and predictions can be made regarding the integrity and reliability of fuel element designs. The SMiRT conference series, through the division on fuel elements and the post-conference seminars on fuel element modeling, provided technical forums for the international participation in the exchange of knowledge concerning the thermomechanical modeling of fuel elements. This paper discusses the technical advances in the behavioral modeling of fuel elements presented at the SMiRT conference series since its inception in 1971. Progress in the areas of material properties and constitutive relationships, modeling methodologies, and integral modeling approaches was reviewed and is summarized in light of their impact on the thermomechanical modeling of nuclear fuel elements. 34 refs., 5 tabs
Subcellular analysis by laser ablation electrospray ionization mass spectrometry
Vertes, Akos; Stolee, Jessica A; Shrestha, Bindesh
2014-12-02
In various embodiments, a method of laser ablation electrospray ionization mass spectrometry (LAESI-MS) may generally comprise micro-dissecting a cell comprising at least one of a cell wall and a cell membrane to expose at least one subcellular component therein, ablating the at least one subcellular component by an infrared laser pulse to form an ablation plume, intercepting the ablation plume by an electrospray plume to form ions, and detecting the ions by mass spectrometry.
Finite element model updating of concrete structures based on imprecise probability
Biswal, S.; Ramaswamy, A.
2017-09-01
Imprecise probability based methods are developed in this study for the parameter estimation, in finite element model updating for concrete structures, when the measurements are imprecisely defined. Bayesian analysis using Metropolis Hastings algorithm for parameter estimation is generalized to incorporate the imprecision present in the prior distribution, in the likelihood function, and in the measured responses. Three different cases are considered (i) imprecision is present in the prior distribution and in the measurements only, (ii) imprecision is present in the parameters of the finite element model and in the measurement only, and (iii) imprecision is present in the prior distribution, in the parameters of the finite element model, and in the measurements. Procedures are also developed for integrating the imprecision in the parameters of the finite element model, in the finite element software Abaqus. The proposed methods are then verified against reinforced concrete beams and prestressed concrete beams tested in our laboratory as part of this study.
Energy Technology Data Exchange (ETDEWEB)
El Shawish, Samir, E-mail: Samir.ElShawish@ijs.si [Jožef Stefan Institute, Jamova cesta 39, SI-1000 Ljubljana (Slovenia); Cizelj, Leon [Jožef Stefan Institute, Jamova cesta 39, SI-1000 Ljubljana (Slovenia); Simonovski, Igor [European Commission, DG-JRC, Institute for Energy and Transport, P.O. Box 2, NL-1755 ZG Petten (Netherlands)
2013-08-15
Highlights: ► We estimate the performance of cohesive elements for modeling grain boundaries. ► We compare the computed stresses in ABAQUS finite element solver. ► Tests are performed in analytical and realistic models of polycrystals. ► Most severe issue is found within the plastic grain response. ► Other identified issues are related to topological constraints in modeling space. -- Abstract: We propose and demonstrate several tests to estimate the performance of the cohesive elements in ABAQUS for modeling grain boundaries in complex spatial structures such as polycrystalline aggregates. The performance of the cohesive elements is checked by comparing the computed stresses with the theoretically predicted values for a homogeneous material under uniaxial tensile loading. Statistical analyses are performed under different loading conditions for two elasto-plastic models of the grains: isotropic elasticity with isotropic hardening plasticity and anisotropic elasticity with crystal plasticity. Tests are conducted on an analytical finite element model generated from Voronoi tessellation as well as on a realistic finite element model of a stainless steel wire. The results of the analyses highlight several issues related to the computation of normal and shear stresses. The most severe issue is found within the plastic grain response where the computed normal stresses on a particularly oriented cohesive elements are significantly underestimated. Other issues are found to be related to topological constraints in the modeling space and result in the increased scatter of the computed stresses.
Subcellular controls of mercury trophic transfer to a marine fish
International Nuclear Information System (INIS)
Dang Fei; Wang Wenxiong
2010-01-01
Different behaviors of inorganic mercury [Hg(II)] and methylmercury (MeHg) during trophic transfer along the marine food chain have been widely reported, but the mechanisms are not fully understood. The bioavailability of ingested mercury, quantified by assimilation efficiency (AE), was investigated in a marine fish, the grunt Terapon jarbua, based on mercury subcellular partitioning in prey and purified subcellular fractions of prey tissues. The subcellular distribution of Hg(II) differed substantially among prey types, with cellular debris being a major (49-57% in bivalves) or secondary (14-19% in other prey) binding pool. However, MeHg distribution varied little among prey types, with most MeHg (43-79%) in heat-stable protein (HSP) fraction. The greater AEs measured for MeHg (90-94%) than for Hg(II) (23-43%) confirmed the findings of previous studies. Bioavailability of each purified subcellular fraction rather than the proposed trophically available metal (TAM) fraction could better elucidate mercury assimilation difference. Hg(II) associated with insoluble fraction (e.g. cellular debris) was less bioavailable than that in soluble fraction (e.g. HSP). However, subcellular distribution was shown to be less important for MeHg, with each fraction having comparable MeHg bioavailability. Subcellular distribution in prey should be an important consideration in mercury trophic transfer studies.
Subcellular controls of mercury trophic transfer to a marine fish
Energy Technology Data Exchange (ETDEWEB)
Dang Fei [Department of Biology, Hong Kong University of Science and Technology (HKUST), Clear Water Bay, Kowloon (Hong Kong); Wang Wenxiong, E-mail: wwang@ust.hk [Department of Biology, Hong Kong University of Science and Technology (HKUST), Clear Water Bay, Kowloon (Hong Kong)
2010-09-15
Different behaviors of inorganic mercury [Hg(II)] and methylmercury (MeHg) during trophic transfer along the marine food chain have been widely reported, but the mechanisms are not fully understood. The bioavailability of ingested mercury, quantified by assimilation efficiency (AE), was investigated in a marine fish, the grunt Terapon jarbua, based on mercury subcellular partitioning in prey and purified subcellular fractions of prey tissues. The subcellular distribution of Hg(II) differed substantially among prey types, with cellular debris being a major (49-57% in bivalves) or secondary (14-19% in other prey) binding pool. However, MeHg distribution varied little among prey types, with most MeHg (43-79%) in heat-stable protein (HSP) fraction. The greater AEs measured for MeHg (90-94%) than for Hg(II) (23-43%) confirmed the findings of previous studies. Bioavailability of each purified subcellular fraction rather than the proposed trophically available metal (TAM) fraction could better elucidate mercury assimilation difference. Hg(II) associated with insoluble fraction (e.g. cellular debris) was less bioavailable than that in soluble fraction (e.g. HSP). However, subcellular distribution was shown to be less important for MeHg, with each fraction having comparable MeHg bioavailability. Subcellular distribution in prey should be an important consideration in mercury trophic transfer studies.
International Nuclear Information System (INIS)
Murnal, Pranesh; Kotalwar, Sandip; Ramarao, A.; Sinha, S.K.; Singh, U.P.
2008-01-01
Finite Element Modeling is one of the efficient analytical tools for analysis of complicated structures subjected to variety of loads. However the reliability of the analyses is always questionable due to idealizations and assumptions made in the design. The model can be more realistic if it is refined based on experimental support. This paper presents refinement of finite-element model of Koyna Dam-foot Power House (KDPH) building, which is structurally complicated and asymmetrical. The dynamic properties of the building have been identified experimentally through Ambient Vibration Tests (AVT). The building has also been elaborately modeled analytically. The finite-element model is further refined so as to minimize the differences between analytical and the measured natural frequency of the building. The final refined finite-element model of KDPH building is able to produce natural frequency in good agreement with the measured natural frequency of the building. (author)
Determination of acoustic vibration in watermelon by finite element modeling
Nourain, Jamal; Ying, Yibin B.; Wang, Jianping; Rao, Xiuqin
2004-11-01
The analysis of the vibration responses of a fruit is suggested to measure firmness non-destructively. A wooden ball excited the fruits and the response signals were captured using an accelerometer sensor. The method has been well studied and understood on ellipsoidal shaped fruit (watermelon). In this work, using the finite element simulations, the applicability of the method on watermelon was investigated. The firmness index is dependent on the mass, density, and natural frequency of the lowest spherical modes (under free boundary conditions). This developed index extends the firmness estimation for fruits or vegetables from a spherical to an ellipsoidal shape. The mode of Finite element analysis (FEA) of watermelon was generated based on measured geometry, and it can be served as a theoretical reference for predicting the modal characteristics as a function of design parameters such as material, geometrical, and physical properties. It was found that there were four types of mode shapes. The 1st one was first-type longitudinal mode, the 2nd one was the second-type longitudinal mode, the 3rd one was breathing mode or pure compression mode, and the fourth was flexural or torsional mode shape. As suggested in many references, the First-type spherical vibration mode or oblate-Prolate for watermelon is the lowest bending modes, it's most likely related to fruit firmness. Comparisons of finite element and experimental modal parameters show that both results were agreed in mode shape as well as natural frequencies. In order to measure the vibration signal of the mode, excitation and sensors should be placed on the watermelon surface far away from the nodal lines. The excitation and the response sensors should be in accordance with vibration directions. The correlations between the natural frequency and firmness was 0.856, natural frequency and Young's modulus was 0.800, and the natural frequency and stiffness factor (SF) was 0.862. The stiffness factor (SF) is adequate
Study of gap conductance model for thermo mechanical fully coupled finite element model
International Nuclear Information System (INIS)
Kim, Hyo Cha; Yang, Yong Sik; Kim, Dae Ho; Bang, Je Geon; Kim, Sun Ki; Koo, Yang Hyun
2012-01-01
A light water reactor (LWR) fuel rod consists of zirconium alloy cladding and uranium dioxide pellets, with a slight gap between them. Therefore, the mechanical integrity of zirconium alloy cladding is the most critical issue, as it is an important barrier for fission products released into the environment. To evaluate the stress and strain of the cladding during operation, fuel performance codes with a one-dimensional (1D) approach have been reported since the 1970s. However, it is difficult for a 1D model to simulate the stress and strain of the cladding accurately owing to a lack of degree of freedom. A LWR fuel performance code should include thermo-mechanical coupled model owing to the existence of the fuel-cladding gap. Generally, the gap that is filled with helium gas results in temperature drop along radius direction. The gap conductance that determines temperature gradient within the gap is very sensitive to gap thickness. For instance, once the gap size increases up to several microns in certain region, difference of surface temperatures increases up to 100 Kelvin. Therefore, iterative thermo-mechanical coupled analysis is required to solve temperature distribution throughout pellet and cladding. Consequently, the Finite Element (FE) module, which can simulate a higher degree of freedom numerically, is an indispensable requirement to understand the thermomechanical behavior of cladding. FRAPCON-3, which is reliable performance code, has iterative loop for thermo-mechanical coupled calculation to solve 1D gap conductance model. In FEMAXI-III, 1D thermal analysis module and FE module for stress-strain analysis were separated. 1D thermal module includes iterative analysis between them. DIONISIO code focused on thermal contact model as function of surface roughness and contact pressure when the gap is closed. In previous works, gap conductance model has been developed only for 1D model or hybrid model (1D and FE). To simulate temperature, stress and strain
Multivariate Hawkes process models of the occurrence of regulatory elements
DEFF Research Database (Denmark)
Carstensen, L; Sandelin, A; Winther, Ole
2010-01-01
distribution of the occurrences of these TREs along the genome. RESULTS: We present a model of TRE occurrences known as the Hawkes process. We illustrate the use of this model by analyzing two different publically available data sets. We are able to model, in detail, how the occurrence of one TRE is affected....... For each of the two data sets we provide two results: first, a qualitative description of the dependencies among the occurrences of the TREs, and second, quantitative results on the favored or avoided distances between the different TREs. CONCLUSIONS: The Hawkes process is a novel way of modeling the joint...
Carbonatite and alkaline intrusion-related rare earth element deposits–A deposit model
Verplanck, Philip L.; Van Gosen, Bradley S.
2011-01-01
The rare earth elements are not as rare in nature as their name implies, but economic deposits with these elements are not common and few deposits have been large producers. In the past 25 years, demand for rare earth elements has increased dramatically because of their wide and diverse use in high-technology applications. Yet, presently the global production and supply of rare earth elements come from only a few sources. China produces more than 95 percent of the world's supply of rare earth elements. Because of China's decision to restrict exports of these elements, the price of rare earth elements has increased and industrial countries are concerned about supply shortages. As a result, understanding the distribution and origin of rare earth elements deposits, and identifying and quantifying our nation's rare earth elements resources have become priorities. Carbonatite and alkaline intrusive complexes, as well as their weathering products, are the primary sources of rare earth elements. The general mineral deposit model summarized here is part of an effort by the U.S. Geological Survey's Mineral Resources Program to update existing models and develop new descriptive mineral deposit models to supplement previously published models for use in mineral-resource and mineral-environmental assessments. Carbonatite and alkaline intrusion-related REE deposits are discussed together because of their spatial association, common enrichment in incompatible elements, and similarities in genesis. A wide variety of commodities have been exploited from carbonatites and alkaline igneous rocks, such as rare earth elements, niobium, phosphate, titanium, vermiculite, barite, fluorite, copper, calcite, and zirconium. Other enrichments include manganese, strontium, tantalum, thorium, vanadium, and uranium.
UNIFIED MODELS OF ELEMENTS OF POWER SUPPLY SYSTEMS BASED ON EQUATIONS IN PHASE COORDINATES
Directory of Open Access Journals (Sweden)
Yu.N. Vepryk
2015-12-01
Full Text Available Purpose. The models of electrical machines in the phase coordinates, the universal algorithm for the simulation of separate elements in a d-q coordinates system and in a phase-coordinates system are proposed. Methodology. Computer methods of investigation of transients in electrical systems are based on a compilation of systems of differential equations and their numerical integration solution methods. To solve differential equations an implicit method of numerical integration was chosen. Because it provides to complete structural simulation possibility: firstly developing models of separate elements and then forming a model of the complex system. For the mathematical simulation of electromagnetic transients in the elements of the electrical systems has been accepted the implicit Euler-Cauchy method, because it provides a higher precision and stability of the computing processes. Results. In developing the model elements identified two groups of elements: - Static elements and electrical machines in the d-q coordinates; - Rotating electrical machines in phase coordinates. As an example, the paper provides a model of synchronous and asynchronous electric machines in the d-q coordinates system and the phase coordinate system. The generalization algorithm and the unified notation form of equations of elements of an electrical system are obtained. It provides the possibility of using structural methods to develop a mathematical model of power systems under transient conditions. Practical value. In addition, the using of a computer model allows to implement multivariant calculations for research and study of factors affecting the quantitative characteristics of the transients.
Modeling bistable behaviors in morphing structures through finite element simulations.
Guo, Qiaohang; Zheng, Huang; Chen, Wenzhe; Chen, Zi
2014-01-01
Bistable structures, exemplified by the Venus flytrap and slap bracelets, can transit between different configurations upon certain external stimulation. Here we study, through three-dimensional finite element simulations, the bistable behaviors in elastic plates in the absence of terminate loads, but with pre-strains in one (or both) of the two composite layers. Both the scenarios with and without a given geometric mis-orientation angle are investigated, the results of which are consistent with recent theoretical and experimental studies. This work can open ample venues for programmable designs of plant/shell structures with large deformations, with applications in designing bio-inspired robotics for biomedical research and morphing/deployable structures in aerospace engineering.
Lumped Mass Modeling for Local-Mode-Suppressed Element Connectivity
DEFF Research Database (Denmark)
Joung, Young Soo; Yoon, Gil Ho; Kim, Yoon Young
2005-01-01
connectivity parameterization (ECP) is employed. On the way to the ultimate crashworthy structure optimization, we are now developing a local mode-free topology optimization formulation that can be implemented in the ECP method. In fact, the local mode-freeing strategy developed here can be also used directly...... experiencing large structural changes, appears to be still poor. In ECP, the nodes of the domain-discretizing elements are connected by zero-length one-dimensional elastic links having varying stiffness. For computational efficiency, every elastic link is now assumed to have two lumped masses at its ends....... Choosing appropriate penalization functions for lumped mass and link stiffness is important for local mode-free results. However, unless the objective and constraint functions are carefully selected, it is difficult to obtain clear black-and-white results. It is shown that the present formulation is also...
DEFF Research Database (Denmark)
Høier, Birgitte; Prats Gavalda, Clara; Qvortrup, Klaus
2013-01-01
The subcellular distribution and secretion of vascular endothelial growth factor (VEGF) was examined in skeletal muscle of healthy humans. Skeletal muscle biopsies were obtained from m.v. lateralis before and after a 2 h bout of cycling exercise. VEGF localization was conducted on preparations...... regions and between the contractile elements within the muscle fibers; and in pericytes situated on the skeletal muscle capillaries. Quantitation of the subsarcolemmal density of VEGF vesicles, calculated on top of myonuclei, in the muscle fibers revealed a ∼50% increase (P...
Key Elements of the Tutorial Support Management Model
Lynch, Grace; Paasuke, Philip
2011-01-01
In response to an exponential growth in enrolments the "Tutorial Support Management" (TSM) model has been adopted by Open Universities Australia (OUA) after a two-year project on the provision of online tutor support in first year, online undergraduate units. The essential focus of the TSM model was the development of a systemic approach…
Crack modeling of rotating blades with cracked hexahedral finite element method
Liu, Chao; Jiang, Dongxiang
2014-06-01
Dynamic analysis is the basis in investigating vibration features of cracked blades, where the features can be applied to monitor health state of blades, detect cracks in an early stage and prevent failures. This work presents a cracked hexahedral finite element method for dynamic analysis of cracked blades, with the purpose of addressing the contradiction between accuracy and efficiency in crack modeling of blades in rotor system. The cracked hexahedral element is first derived with strain energy release rate method, where correction of stress intensity factors of crack front and formulation of load distribution of crack surface are carried out to improve the modeling accuracy. To consider nonlinear characteristics of time-varying opening and closure effects caused by alternating loads, breathing function is proposed for the cracked hexahedral element. Second, finite element method with contact element is analyzed and used for comparison. Finally, validation of the cracked hexahedral element is carried out in terms of breathing effects of cracked blades and natural frequency in different crack depths. Good consistency is acquired between the results with developed cracked hexahedral element and contact element, while the computation time is significantly reduced in the previous one. Therefore, the developed cracked hexahedral element achieves good accuracy and high efficiency in crack modeling of rotating blades.
International Nuclear Information System (INIS)
Hawileh, Rami A.; El-Maaddawy, Tamer A.; Naser, Mohannad Z.
2012-01-01
Highlights: ► A 3D nonlinear FE model is developed of RC deep beams with web openings. ► We used cohesion elements to simulate bond. ► The developed FE model is suitable for analysis of such complex structures. -- Abstract: This paper aims to develop 3D nonlinear finite element (FE) models for reinforced concrete (RC) deep beams containing web openings and strengthened in shear with carbon fiber reinforced polymer (CFRP) composite sheets. The web openings interrupted the natural load path either fully or partially. The FE models adopted realistic materials constitutive laws that account for the nonlinear behavior of materials. In the FE models, solid elements for concrete, multi-layer shell elements for CFRP and link elements for steel reinforcement were used to simulate the physical models. Special interface elements were implemented in the FE models to simulate the interfacial bond behavior between the concrete and CFRP composites. A comparison between the FE results and experimental data published in the literature demonstrated the validity of the computational models in capturing the structural response for both unstrengthened and CFRP-strengthened deep beams with openings. The developed FE models can serve as a numerical platform for performance prediction of RC deep beams with openings strengthened in shear with CFRP composites.
International Nuclear Information System (INIS)
Ostachowicz, W; Kudela, P
2010-01-01
A Spectral Element Method is used for wave propagation modelling. A 3D solid spectral element is derived with shape functions based on Lagrange interpolation and Gauss-Lobatto-Legendre points. This approach is applied for displacement approximation suited for fundamental modes of Lamb waves as well as potential distribution in piezoelectric transducers. The novelty is the model geometry extension from flat to curved elements for application in shell-like structures. Exemplary visualisations of waves excited by the piezoelectric transducers in curved shell structure made of aluminium alloy are presented. Simple signal analysis of wave interaction with crack is performed. The crack is modelled by separation of appropriate nodes between elements. An investigation of influence of the crack length on wave propagation signals is performed. Additionally, some aspects of the spectral element method implementation are discussed.
Towards GLUE 2: evolution of the computing element information model
International Nuclear Information System (INIS)
Andreozzi, S; Burke, S; Field, L; Konya, B
2008-01-01
A key advantage of Grid systems is the ability to share heterogeneous resources and services between traditional administrative and organizational domains. This ability enables virtual pools of resources to be created and assigned to groups of users. Resource awareness, the capability of users or user agents to have knowledge about the existence and state of resources, is required in order utilize the resource. This awareness requires a description of the services and resources typically defined via a community-agreed information model. One of the most popular information models, used by a number of Grid infrastructures, is the GLUE Schema, which provides a common language for describing Grid resources. Other approaches exist, however they follow different modeling strategies. The presence of different flavors of information models for Grid resources is a barrier for enabling inter-Grid interoperability. In order to solve this problem, the GLUE Working Group in the context of the Open Grid Forum was started. The purpose of the group is to oversee a major redesign of the GLUE Schema which should consider the successful modeling choices and flaws that have emerged from practical experience and modeling choices from other initiatives. In this paper, we present the status of the new model for describing computing resources as the first output from the working group with the aim of dissemination and soliciting feedback from the community
Modelling of Conveyor Belt Passage by Driving Drum Using Finite Element Methods
Directory of Open Access Journals (Sweden)
Nikoleta Mikušová
2017-12-01
Full Text Available The finite element methods are used in many disciplines by the development of products, typically in mechanical engineering (for example in automotive industry, biomechanics, etc.. Some modern programs of the finite element's methods have specific tools (electromagnetic, fluid and structural simulations. The finite elements methods allow detailed presentation of structures by bending or torsion, complete design, testing and optimization before the prototype production. The aims of this paper were to the model of conveyor belt passage by driving drum. The model was created by the program Abaqus CAE. The created model presented data about forces, pressures, and deformation of the belt conveyor.
Mapping the subcellular distribution of biomolecules at the ultrastructural level by ion microscopy.
Galle, P; Escaig, F; Dantin, F; Zhang, L
1996-05-01
Analytical ion microscopy, a method proposed and developed in 1960 by Casting and Slodzian at the Orsay University (France), makes it possible to obtain easily and rapidly analytical images representing the distribution in a tissue section of elements or isotopes (beginning from the three isotopes of hydrogen until to transuranic elements), even when these elements or isotopes are at a trace concentration of 1 ppm or less. This method has been applied to study the subcellular distribution of different varieties of biomolecules. The subcellular location of these molecules can be easily determined when the molecules contain in their structures a specific atom such as fluorine, iodine, bromine or platinum, what is the case of many pharmaceutical drugs. In this situation, the distribution of these specific atoms can be considered as representative of the distribution of the corresponding molecule. In other cases, the molecules must be labelled with an isotope which may be either radioactive or stable. Recent developments in ion microscopy allow the obtention of their chemical images at ultra structural level. In this paper we present the results obtained with the prototype of a new Scanning Ion Microscope used for the study of the intracellular distribution of different varieties of molecules: glucocorticoids, estrogens, pharmaceutical drugs and pyrimidine analogues.
Efficient Finite Element Models for Calculation of the No-load losses of the Transformer
Directory of Open Access Journals (Sweden)
Kamran Dawood
2017-10-01
Full Text Available Different transformer models are examined for the calculation of the no-load losses using finite element analysis. Two-dimensional and three-dimensional finite element analyses are used for the simulation of the transformer. Results of the finite element method are also compared with the experimental results. The Result shows that 3-dimensional provide high accuracy as compared to the 2 dimensional full and half model. However, the 2-dimensional half model is the less time-consuming method as compared to the 3 and 2-dimensional full model. Simulation time duration taken by the different models of the transformer is also compared. The difference between the 3-dimensional finite element method and experimental results are less than 3%. These numerical methods can help transformer designers to minimize the development of the prototype transformers.
Lower bound element and submodel for modelling of joints between precast concrete panels
DEFF Research Database (Denmark)
Herfelt, Morten Andersen; Poulsen, Peter Noe; Hoang, Linh Cao
2015-01-01
In practice, precast concrete structures are designed using either analytical methods or linear finite element tools, and the in-situ cast joints between the precast panels are assessed using conservative empirical design formulas. This often leads to a suboptimal design, and local mechanisms ins....... The computational time and problem size of the joint element and detailed model will be discussed....
Some aspects to improve sound insulation prediction models for lightweight elements
Gerretsen, E.
2007-01-01
The best approach to include lightweight building elements in prediction models for airborne and impact sound insulation between rooms, as in EN 12354, is not yet completely clear. Two aspects are at least of importance, i.e. to derive the sound reduction index R for lightweight elements for
Model Experiments on Chemical Properties of Superheavy Elements in Aqueous Solutions
Szeglowski, Z
2003-01-01
This paper presents a brief review of model experiments on investigation of chemical properties of transactinide elements, ranging from 104 to 116. The possibilities of isolation of the nuclei of these elements from nuclear reaction products, using the ion-exchange method, are also considered.
Stochastic Finite Element Analysis of Non-Linear Structures Modelled by Plasticity Theory
DEFF Research Database (Denmark)
Frier, Christian; Sørensen, John Dalsgaard
2003-01-01
A Finite Element Reliability Method (FERM) is introduced to perform reliability analyses on two-dimensional structures in plane stress, modeled by non-linear plasticity theory. FERM is a coupling between the First Order Reliability Method (FORM) and the Finite Element Method (FEM). FERM can be us...
Bag-model matrix elements of the parity-violating weak hamiltonian for charmed baryons
International Nuclear Information System (INIS)
Ebert, D.; Kallies, W.
1983-01-01
Baryon matrix elements of the parity-violating part of the charmchanging weak Hamiltonian might be significant and comparable with those of the parity-conserving one due to large symmetry breaking. Expression for these new matrix elements by using the MIT-bag model are derived and their implications on earlier calculations of nonleptonic charmed-baryon decays are estimated
Towards GLUE2 evolution of the computing element information model
Andreozzi, S; Field, L; Kónya, B
2008-01-01
A key advantage of Grid systems is the ability to share heterogeneous resources and services between traditional administrative and organizational domains. This ability enables virtual pools of resources to be created and assigned to groups of users. Resource awareness, the capability of users or user agents to have knowledge about the existence and state of resources, is required in order utilize the resource. This awareness requires a description of the services and resources typically defined via a community-agreed information model. One of the most popular information models, used by a number of Grid infrastructures, is the GLUE Schema, which provides a common language for describing Grid resources. Other approaches exist, however they follow different modeling strategies. The presence of different flavors of information models for Grid resources is a barrier for enabling inter-Grid interoperability. In order to solve this problem, the GLUE Working Group in the context of the Open Grid Forum was started. ...
Finite element modelling of elastic intraplate stresses due to ...
Indian Academy of Sciences (India)
Among a range of material parameters analysed, the model with a mechan- ically strong lower ..... curves marked by solid circles and diamonds cor- respond to two values of .... the Indian continental lithosphere: Role of diffusion creep;. Proc.
Modeling impact damper in building frames using GAP element
Directory of Open Access Journals (Sweden)
Seyed Mehdi Zahrai
2017-05-01
Full Text Available Main effective factor in impact dampers to control vibration is to create disruption in structural oscillation amplitude using small forces induced by auxiliary masses to reduce strong vibrations. So far, modeling of the impact damper has been conducted solely through MATLAB software. Naturally, the functional aspects of this software are limited in research and development aspects compared to the common programs such as SAP2000 and ETABS. In this paper, a Single Degree of Freedom System, SDOF, is first modeled under harmonic loading with maximum amplitude of 0.4g in SAP2000 program. Then, the results are compared with numerical model. In this way, the proposed model is validated and the SDOF system equipped with an impact damper is investigated under the Kobe and Northridge earthquake records using SAP2000 model. Based on obtained results, the system equipped with an impact damper under the Kobe and Northridge earthquakes for structures considered in this study would have better seismic performance in which maximum displacements are reduced 6% and 33% respectively. Finally, impact dampers are modeled in a 4-story building structure with concentric bracing leading to 12% reduction in story drifts.
Distinct element modelling of joint behavior in nearfield rock
International Nuclear Information System (INIS)
Hoekmark, H.; Israelsson, J.
1991-09-01
The investigation reported here concerns numerical simulations of the behaviour of the jointed rock mass in the nearest surroundings Of a portion of a KBS3 type tunnel, including one deposition hole. Results from three-dimensional models are presented and compared to results obtained from previous investigations of two-dimensional models. The three-dimensional models and the previous two-dimensional models relate to conditions prevailing in and around the BMT drift in Stripa mine. In particular are the importance of conditions, implicitly assumed in two-dimensional models, regarding joint orientation and joint persistence, investigated. The evaluation of the results is focused on effects on joint apertures. The implications regarding rock permeability is discussed for a couple of cases. It is found that the real three-dimensional geometry is of great importance, and that the two-dimensional models in some cases tend to overestimate the magnitudes of inelastic joint displacements and associated aperture changes considerably, i.e. the real three-dimensional situation implies locking effects, that generally stabilizes the block assembly. It is recommended that further three-dimensional simulations should be performed to determine relevant ranges of alteration of fracture apertures, caused by excavation and thermal processes, and that fracture geometries, that are typical to virgin granitic rock, should be defined and used as input for these simulations. (au)
Subcellular boron and fluorine distributions with SIMS ion microscopy in BNCT and cancer research
Energy Technology Data Exchange (ETDEWEB)
Subhash Chandra
2008-05-30
The development of a secondary ion mass spectrometry (SIMS) based technique of Ion Microscopy in boron neutron capture therapy (BNCT) was the main goal of this project, so that one can study the subcellular location of boron-10 atoms and their partitioning between the normal and cancerous tissue. This information is fundamental for the screening of boronated drugs appropriate for neutron capture therapy of cancer. Our studies at Cornell concentrated mainly on studies of glioblastoma multiforme (GBM). The early years of the grant were dedicated to the development of cryogenic methods and correlative microscopic approaches so that a reliable subcellular analysis of boron-10 atoms can be made with SIMS. In later years SIMS was applied to animal models and human tissues of GBM for studying the efficacy of potential boronated agents in BNCT. Under this grant the SIMS program at Cornell attained a new level of excellence and collaborative SIMS studies were published with leading BNCT researchers in the U.S.
Subcellular boron and fluorine distributions with SIMS ion microscopy in BNCT and cancer research
International Nuclear Information System (INIS)
Subhash, Chandra
2008-01-01
The development of a secondary ion mass spectrometry (SIMS) based technique of Ion Microscopy in boron neutron capture therapy (BNCT) was the main goal of this project, so that one can study the subcellular location of boron-10 atoms and their partitioning between the normal and cancerous tissue. This information is fundamental for the screening of boronated drugs appropriate for neutron capture therapy of cancer. Our studies at Cornell concentrated mainly on studies of glioblastoma multiforme (GBM). The early years of the grant were dedicated to the development of cryogenic methods and correlative microscopic approaches so that a reliable subcellular analysis of boron-10 atoms can be made with SIMS. In later years SIMS was applied to animal models and human tissues of GBM for studying the efficacy of potential boronated agents in BNCT. Under this grant the SIMS program at Cornell attained a new level of excellence and collaborative SIMS studies were published with leading BNCT researchers in the U.S.
Soft tissue deformation using a Hierarchical Finite Element Model.
Faraci, Alessandro; Bello, Fernando; Darzi, Ara
2004-01-01
Simulating soft tissue deformation in real-time has become increasingly important in order to provide a realistic virtual environment for training surgical skills. Several methods have been proposed with the aim of rendering in real-time the mechanical and physiological behaviour of human organs, one of the most popular being Finite Element Method (FEM). In this paper we present a new approach to the solution of the FEM problem introducing the concept of parent and child mesh within the development of a hierarchical FEM. The online selection of the child mesh is presented with the purpose to adapt the mesh hierarchy in real-time. This permits further refinement of the child mesh increasing the detail of the deformation without slowing down the simulation and giving the possibility of integrating force feedback. The results presented demonstrate the application of our proposed framework using a desktop virtual reality (VR) system that incorporates stereo vision with integrated haptics co-location via a desktop Phantom force feedback device.
Coupling between a geochemical model and a transport model of dissolved elements
International Nuclear Information System (INIS)
Jacquier, P.
1988-10-01
In order to assess the safety analysis of an underground repository, the transport of radioelements in groundwater and their interactions with the geological medium are modelled. The objective of this work is the setting up and experimental validation of the coupling of a geochemical model with a transport model of dissolved elements. A laboratory experiment was developed at the CEA center of Cadarache. Flow-through experiments were carried out on columns filled with crushed limestone, where several inflow conditions were taken into account as the temperature, the presence of a pollutant (strontium chloride) at different concentrations. The results consist of the evolution of the chemical composition of the water at the outlet of the column. The final aim of the study is to explain these results with a coupled model where geochemical and transport phenomena are modelled in a two-step procedure. This code, called STELE, was built by introducing a geochemical code, CHIMERE, into an existing transport code, METIS. At this stage, the code CHIMERE can take into account: any chemical reaction in aqueous phase (complexation, acid-base reaction, redox equilibrium), dissolution-precipitation of minerals and solid phases, dissolution-degassing of gas. The paper intends to describe the whole process leading to the coupling which can be forecasted over the next years between geochemical and transport models
A finite element model for nonlinear shells of revolution
International Nuclear Information System (INIS)
Cook, W.A.
1979-01-01
A shell-of-revolution model was developed to analyze impact problems associated with the safety analysis of nuclear material shipping containers. The nonlinear shell theory presented by Eric Reissner in 1972 was used to develop our model. Reissner's approach includes transverse shear deformation and moments turning about the middle surface normal. With these features, this approach is valid for both thin and thick shells. His theory is formulated in terms of strain and stress resultants that refer to the undeformed geometry. This nonlinear shell model is developed using the virtual work principle associated with Reissner's equilibrium equations. First, the virtual work principle is modified for incremental loading; then it is linearized by assuming that the nonlinear portions of the strains are known. By iteration, equilibrium is then approximated for each increment. A benefit of this approach is that this iteration process makes it possible to use nonlinear material properties. (orig.)
Two dimensional finite element heat transfer models for softwood
Hongmei Gu; John F. Hunt
2004-01-01
The anisotropy of wood creates a complex problem for solving heat and mass transfer problems that require analyses be based on fundamental material properties of the wood structure. Most heat transfer models use average thermal properties across either the radial or tangential directions and have not differentiated the effects of cellular alignment, earlywood/latewood...
Elements of episodic-like memory in animal models.
Crystal, Jonathon D
2009-03-01
Representations of unique events from one's past constitute the content of episodic memories. A number of studies with non-human animals have revealed that animals remember specific episodes from their past (referred to as episodic-like memory). The development of animal models of memory holds enormous potential for gaining insight into the biological bases of human memory. Specifically, given the extensive knowledge of the rodent brain, the development of rodent models of episodic memory would open new opportunities to explore the neuroanatomical, neurochemical, neurophysiological, and molecular mechanisms of memory. Development of such animal models holds enormous potential for studying functional changes in episodic memory in animal models of Alzheimer's disease, amnesia, and other human memory pathologies. This article reviews several approaches that have been used to assess episodic-like memory in animals. The approaches reviewed include the discrimination of what, where, and when in a radial arm maze, dissociation of recollection and familiarity, object recognition, binding, unexpected questions, and anticipation of a reproductive state. The diversity of approaches may promote the development of converging lines of evidence on the difficult problem of assessing episodic-like memory in animals.
Implementation of a Unified Constitutive Model into the ABAQUS Finite Element Package
National Research Council Canada - National Science Library
Wescott, R
1999-01-01
Unified constitutive models have previously been developed at AMRL and implemented into the PAFEC and ABAQUS Finite Element packages to predict the stress-strain response of structures that undergo...
Predictive modelling of gene expression from transcriptional regulatory elements.
Budden, David M; Hurley, Daniel G; Crampin, Edmund J
2015-07-01
Predictive modelling of gene expression provides a powerful framework for exploring the regulatory logic underpinning transcriptional regulation. Recent studies have demonstrated the utility of such models in identifying dysregulation of gene and miRNA expression associated with abnormal patterns of transcription factor (TF) binding or nucleosomal histone modifications (HMs). Despite the growing popularity of such approaches, a comparative review of the various modelling algorithms and feature extraction methods is lacking. We define and compare three methods of quantifying pairwise gene-TF/HM interactions and discuss their suitability for integrating the heterogeneous chromatin immunoprecipitation (ChIP)-seq binding patterns exhibited by TFs and HMs. We then construct log-linear and ϵ-support vector regression models from various mouse embryonic stem cell (mESC) and human lymphoblastoid (GM12878) data sets, considering both ChIP-seq- and position weight matrix- (PWM)-derived in silico TF-binding. The two algorithms are evaluated both in terms of their modelling prediction accuracy and ability to identify the established regulatory roles of individual TFs and HMs. Our results demonstrate that TF-binding and HMs are highly predictive of gene expression as measured by mRNA transcript abundance, irrespective of algorithm or cell type selection and considering both ChIP-seq and PWM-derived TF-binding. As we encourage other researchers to explore and develop these results, our framework is implemented using open-source software and made available as a preconfigured bootable virtual environment. © The Author 2014. Published by Oxford University Press. For Permissions, please email: journals.permissions@oup.com.
A generic biokinetic model for predicting the behaviour of the lanthanide elements in the human body
International Nuclear Information System (INIS)
Taylor, D.M.; Leggett, R.W.
2003-01-01
Information on the biokinetics of the 15 elements of the lanthanide series, 57 La to 71 Lu, is too sparse to permit individual development of meaningful biokinetic models to describe the behaviour of each of the elements in humans. The lanthanides show a regular gradation in chemical properties across the series, and animal studies indicate that this is reflected in regular differences in their deposition in tissues such as the liver and skeleton. These regular differences in chemical and biological behaviour have been utilised to construct a generic lanthanide biokinetic model and to define element-specific parameters for each element in the series. This report describes the use of the available biokinetic data for humans and animals to derive the parameters for each of the elements. (author)
Energy Technology Data Exchange (ETDEWEB)
Patra, Anirban [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Wen, Wei [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Martinez Saez, Enrique [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Tome, Carlos [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
2016-05-31
This report describes the implementation of a crystal plasticity framework (VPSC) for irradiation hardening and plastic deformation in the finite element code, MOOSE. Constitutive models for irradiation hardening and the crystal plasticity framework are described in a previous report [1]. Here we describe these models briefly and then describe an algorithm for interfacing VPSC with finite elements. Example applications of tensile deformation of a dog bone specimen and a 3D pre-irradiated bar specimen performed using MOOSE are demonstrated.
Directory of Open Access Journals (Sweden)
E. Majchrzak
2008-12-01
Full Text Available The dual reciprocity boundary element method is applied for numerical modelling of solidification process. This variant of the BEM is connected with the transformation of the domain integral to the boundary integrals. In the paper the details of the dual reciprocity boundary element method are presented and the usefulness of this approach to solidification process modelling is demonstrated. In the final part of the paper the examples of computations are shown.
Mohd Yunos, Mohd Bulkiah
2007-01-01
There has been enormous increase in the formation of strategic alliance and the research efforts devoted to understanding alliance development process over the last few decades. However, the critical elements that influence the each stage of alliance development are yet unexplored. This dissertation aims to fill this gap and to supplement it by introducing an integrated process model of strategic alliance development and its critical elements. The process model for strategic alliance developm...
A finite element model for analyzing horizontal well BHA behavior
Energy Technology Data Exchange (ETDEWEB)
Akgun, F. [Petroleum Engineering, The Petroleum Institute, P.O. Box 17555, Al-Ain (United Arab Emirates)
2004-04-01
appropriate BHA can be designed if bit side force and bit tilt are determined accurately. Finite element method (FEM) used in this study determines the bit side force and bit tilt simultaneously. The FEM is superior to existing analytical techniques because it can accommodate many more independent parameters which otherwise cannot be taken into account. As a matter of fact, it is believed that oversimplification of actual physical phenomena with unacceptable assumptions is the major source of error with existing BHA designs. This paper presents an FEM technique in assessing the bit tilt and side forces and compares the results with the existing techniques.
Modelling the elements of country vulnerability to earthquake disasters.
Asef, M R
2008-09-01
Earthquakes have probably been the most deadly form of natural disaster in the past century. Diversity of earthquake specifications in terms of magnitude, intensity and frequency at the semicontinental scale has initiated various kinds of disasters at a regional scale. Additionally, diverse characteristics of countries in terms of population size, disaster preparedness, economic strength and building construction development often causes an earthquake of a certain characteristic to have different impacts on the affected region. This research focuses on the appropriate criteria for identifying the severity of major earthquake disasters based on some key observed symptoms. Accordingly, the article presents a methodology for identification and relative quantification of severity of earthquake disasters. This has led to an earthquake disaster vulnerability model at the country scale. Data analysis based on this model suggested a quantitative, comparative and meaningful interpretation of the vulnerability of concerned countries, and successfully explained which countries are more vulnerable to major disasters.
Finite elements modeling of delaminations in composite laminates
DEFF Research Database (Denmark)
Gaiotti, m.; Rizzo, C.M.; Branner, Kim
2011-01-01
of the buckling strength of composite laminates containing delaminations. Namely, non-linear buckling and post-buckling analyses are carried out to predict the critical buckling load of elementary composite laminates affected by rectangular delaminations of different sizes and locations, which are modelled......The application of composite materials in many structures poses to engineers the problem to create reliable and relatively simple methods, able to estimate the strength of multilayer composite structures. Multilayer composites, like other laminated materials, suffer from layer separation, i.......e., delaminations, which may affect the stiffness and stability of structural components. Especially deep delaminations in the mid surface of laminates are expected to reduce the effective flexural stiffness and lead to collapse, often due to buckling behaviour. This paper deals with the numerical modelling...
Finite element modelling of vocal tract changes after voice therapy
Czech Academy of Sciences Publication Activity Database
Vampola, T.; Laukkanen, A. M.; Horáček, Jaromír; Švec, J. G.
2011-01-01
Roč. 5, č. 1 (2011), s. 77-88 ISSN 1802-680X R&D Projects: GA ČR GA101/08/1155 Institutional research plan: CEZ:AV0Z20760514 Keywords : biomechanics of human voice * voice production modelling * vocal excersing * voice training Subject RIV: BI - Acoustics http://www.kme.zcu.cz/acm/index.php/acm/article/view/138
Methanol Oxidation on Model Elemental and Bimetallic Transition Metal Surfaces
DEFF Research Database (Denmark)
Tritsaris, G. A.; Rossmeisl, J.
2012-01-01
Direct methanol fuel cells are a key enabling technology for clean energy conversion. Using density functional theory calculations, we study the methanol oxidation reaction on model electrodes. We discuss trends in reactivity for a set of monometallic and bimetallic transition metal surfaces, flat...... sites on the surface and to screen for novel bimetallic surfaces of enhanced activity. We suggest platinum copper surfaces as promising anode catalysts for direct methanol fuel cells....
Finite Element Method Based Modeling of Resistance Spot-Welded Mild Steel
Directory of Open Access Journals (Sweden)
Miloud Zaoui
Full Text Available Abstract This paper deals with Finite Element refined and simplified models of a mild steel spot-welded specimen, developed and validated based on quasi-static cross-tensile experimental tests. The first model was constructed with a fine discretization of the metal sheet and the spot weld was defined as a special geometric zone of the specimen. This model provided, in combination with experimental tests, the input data for the development of the second model, which was constructed with respect to the mesh size used in the complete car finite element model. This simplified model was developed with coarse shell elements and a spring-type beam element was used to model the spot weld behavior. The global accuracy of the two models was checked by comparing simulated and experimental load-displacement curves and by studying the specimen deformed shapes and the plastic deformation growth in the metal sheets. The obtained results show that both fine and coarse finite element models permit a good prediction of the experimental tests.
Lee, Sabrina S M; Arnold, Allison S; Miara, Maria de Boef; Biewener, Andrew A; Wakeling, James M
2013-09-03
Hill-type models are commonly used to estimate muscle forces during human and animal movement-yet the accuracy of the forces estimated during walking, running, and other tasks remains largely unknown. Further, most Hill-type models assume a single contractile element, despite evidence that faster and slower motor units, which have different activation-deactivation dynamics, may be independently or collectively excited. This study evaluated a novel, two-element Hill-type model with "differential" activation of fast and slow contractile elements. Model performance was assessed using a comprehensive data set (including measures of EMG intensity, fascicle length, and tendon force) collected from the gastrocnemius muscles of goats during locomotor experiments. Muscle forces predicted by the new two-element model were compared to the forces estimated using traditional one-element models and to the forces measured in vivo using tendon buckle transducers. Overall, the two-element model resulted in the best predictions of in vivo gastrocnemius force. The coefficient of determination, r(2), was up to 26.9% higher and the root mean square error, RMSE, was up to 37.4% lower for the two-element model than for the one-element models tested. All models captured salient features of the measured muscle force during walking, trotting, and galloping (r(2)=0.26-0.51), and all exhibited some errors (RMSE=9.63-32.2% of the maximum in vivo force). These comparisons provide important insight into the accuracy of Hill-type models. The results also show that incorporation of fast and slow contractile elements within muscle models can improve estimates of time-varying, whole muscle force during locomotor tasks. Copyright © 2013 Elsevier Ltd. All rights reserved.
International Nuclear Information System (INIS)
Sappal, Ravinder; Burka, John; Dawson, Susan; Kamunde, Collins
2009-01-01
Zinc homeostasis was studied at the tissue and gill subcellular levels in rainbow trout (Oncorhynchus mykiss) following waterborne and dietary exposures, singly and in combination. Juvenile rainbow trout were exposed to 150 or 600 μg l -1 waterborne Zn, 1500 or 4500 μg g -1 dietary Zn, and a combination of 150 μg l -1 waterborne and 1500 μg g -1 dietary Zn for 40 days. Accumulation of Zn in tissues and gill subcellular fractions was measured. At the tissue level, the carcass acted as the main Zn depot containing 84-90% of whole body Zn burden whereas the gill held 4-6%. At the subcellular level, the majority of gill Zn was bioavailable with the estimated metabolically active pool being 81-90%. Interestingly, the nuclei-cellular debris fraction bound the highest amount (40%) of the gill Zn burden. There was low partitioning of Zn into the detoxified pool (10-19%) suggesting that sequestration and chelation are not major mechanisms of cellular Zn homeostasis in rainbow trout. Further, the subcellular partitioning of Zn did not conform to the spill-over model of metal toxicity because Zn binding was indiscriminate irrespective of exposure concentration and duration. The contribution of the branchial and gastrointestinal uptake pathways to Zn accumulation depended on the tissue. Specifically, in plasma, blood cells, and gill, uptake from water was dominant whereas both pathways appeared to contribute equally to Zn accumulation in the carcass. Subcellularly, additive uptake from the two pathways was observed in the heat-stable proteins (HSP) fraction. Toxicologically, Zn exposure caused minimal adverse effects manifested by a transitory inhibition of protein synthesis in gills in the waterborne exposure. Overall, subcellular fractionation appears to have value in the quest for a better understanding of Zn homeostasis and interactions between branchial and gastrointestinal uptake pathways
Energy Technology Data Exchange (ETDEWEB)
Sappal, Ravinder; Burka, John; Dawson, Susan [Department of Biomedical Sciences, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, PE C1A 4P3 (Canada); Kamunde, Collins [Department of Biomedical Sciences, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, PE C1A 4P3 (Canada)], E-mail: ckamunde@upei.ca
2009-03-09
Zinc homeostasis was studied at the tissue and gill subcellular levels in rainbow trout (Oncorhynchus mykiss) following waterborne and dietary exposures, singly and in combination. Juvenile rainbow trout were exposed to 150 or 600 {mu}g l{sup -1} waterborne Zn, 1500 or 4500 {mu}g g{sup -1} dietary Zn, and a combination of 150 {mu}g l{sup -1} waterborne and 1500 {mu}g g{sup -1} dietary Zn for 40 days. Accumulation of Zn in tissues and gill subcellular fractions was measured. At the tissue level, the carcass acted as the main Zn depot containing 84-90% of whole body Zn burden whereas the gill held 4-6%. At the subcellular level, the majority of gill Zn was bioavailable with the estimated metabolically active pool being 81-90%. Interestingly, the nuclei-cellular debris fraction bound the highest amount (40%) of the gill Zn burden. There was low partitioning of Zn into the detoxified pool (10-19%) suggesting that sequestration and chelation are not major mechanisms of cellular Zn homeostasis in rainbow trout. Further, the subcellular partitioning of Zn did not conform to the spill-over model of metal toxicity because Zn binding was indiscriminate irrespective of exposure concentration and duration. The contribution of the branchial and gastrointestinal uptake pathways to Zn accumulation depended on the tissue. Specifically, in plasma, blood cells, and gill, uptake from water was dominant whereas both pathways appeared to contribute equally to Zn accumulation in the carcass. Subcellularly, additive uptake from the two pathways was observed in the heat-stable proteins (HSP) fraction. Toxicologically, Zn exposure caused minimal adverse effects manifested by a transitory inhibition of protein synthesis in gills in the waterborne exposure. Overall, subcellular fractionation appears to have value in the quest for a better understanding of Zn homeostasis and interactions between branchial and gastrointestinal uptake pathways.
Model tests and elasto-plastic finite element analysis on multicavity type PCRV
International Nuclear Information System (INIS)
Nojiri, Y.; Yamazaki, M.; Kotani, K.; Matsuzaki, Y.
1978-01-01
Multicavity type PCRV models were tested to investigate elastic stress distributions, cracking and failure mode of the models, and to determine the adequacy and relative accuracy of finite element structural analyses. The behavior of the models under pressure was investigated, and it was found that the predictions of the analyses showed a good agreement with the test results
Development of a surrogate model for elemental analysis using a natural gamma ray spectroscopy tool
International Nuclear Information System (INIS)
Zhang, Qiong
2015-01-01
A systematic computational method for obtaining accurate elemental standards efficiently for varying borehole conditions was developed based on Monte Carlo simulations, surrogate modeling, and data assimilation. Elemental standards are essential for spectral unfolding in formation evaluation applications commonly used for nuclear well logging tools. Typically, elemental standards are obtained by standardized measurements, but these experiments are expensive and lack the flexibility to address different logging conditions. In contrast, computer-based Monte Carlo simulations provide an accurate and more flexible approach to obtaining elemental standards for formation evaluation. The presented computational method recognizes that in contrast to typical neutron–photon simulations, where the source is typically artificial and well characterized (Galford, 2009), an accurate knowledge of the source is essential for matching the obtained Monte Carlo elemental standards with their experimental counterparts. Therefore, source distributions are adjusted to minimize the L2 difference of the Monte Carlo computed and experimental standards. Subsequently, an accurate surrogate model is developed accounting for different casing and cement thicknesses, and tool positions within the borehole. The adjusted source distributions are then utilized to generate and validate spectra for varying borehole conditions: tool position, casing and cement thickness. The effect of these conditions on the spectra are investigated and discussed in this work. Given that Monte Carlo modeling provides much lower cost and more flexibility, employing Monte Carlo could enhance the processing of nuclear tool logging data computed standards. - Highlights: • A novel computational model for efficiently computing elemental standards for varying borehole conditions has been developed. • A model of an experimental test pit was implemented in the Monte Carlo code GEANT4 for computing elemental standards.
Optical choppers with rotational elements: modeling, design and prototypes
Duma, Virgil-Florin; Cira, Octavian; Demian, Dorin
2017-05-01
We present a brief overview of our contributions regarding the analysis and design of optical choppers. Their applications range numerous domains, from optical sensing in radiometry or telescopes to laser manufacturing and biomedical imaging - for example for the controlled attenuation of light, the elimination of selected spectral domains, or the switching of optical paths. While these aspects are pointed out, the paper describes our analysis, modeling, and manufacturing of prototypes for choppers with: (a) wheels with windows with linear margins; (b) wheels with windows with non-linear margins (semi-circular or elliptical), outward or inward; (c) rotational shafts with different shapes, with slits or with holes. While variant (a) represents classical choppers, variant (b) represents the "eclipse" choppers that we have developed and also patented for the solution with two adjustable wheels that can produce circular windows. Variant (c), of choppers with shafts is also a patent application. Their transmission functions are discussed, for the shape of the laser pulses produced and for the attenuation coefficients obtained. While this discussion has been completed analytically for top-hat laser beams, it has been modeled using simulations for Gaussian and Bessel beams. Design, manufacturing aspects, and prototypes of the different chopper configurations complete the presentation.
Lumped element modelling of superconducting circuits with SPICE
Baveco, Maurice Antoine
2015-01-01
In this project research is carried out aimed at benchmarking a general-purpose circuit simulation software tool (”SPICE”). The project lasted for 8 weeks, from 29 June 2015 until 21 August 2015 at Performance Evaluation section at CERN. The goal was to apply it on a model of superconducting magnets, namely the main dipole circuit (RB circuit) of the the LHC (Large Hadron Collider), developed by members of the section. Then the strengths and the flaws of the tool were investigated. Transient effects were the main simulation focus point. In the first stage a simplified RB circuit was modelled in SPICE based on subcircuits. The first results were promising but still not with a perfect agreement. After implementing more detailed subcircuits there is an improvement and promising agreement achieved between SPICE and the results of the paper (PSpice) [2]. In general there are more strengths than drawbacks of simulating with SPICE. For example, it should have a shorter simulation time than PSpice for the same mo...
Modeling of trim panels in the energy finite element analysis
Moravaeji, Seyed-Javid
Modeling a trim panel is divided into finding the power exchange through two different paths: (i) the connection of the outer and inner panels (ii) through the layers directly. The vibrational power exchanged through the mounts is modeled as the connection of two parallel plates connected via a beam. Wave matrices representing plates and beams are derived separately; then a matrix method is proposed to solve for the wave amplitudes and hence the vibrational power exchange between the plates accordingly. A closed form formula for the case of connection of two identical plates is derived. For the power transmission loss directly through the layers, first transfer matrices representing layers made of different materials is considered. New matrices for a porous layer are derived. A method of finding the layered structure transfer matrix is proposed. It is concluded that in general a single isotropic layer cannot replace a structure accurately. Finally, on the basis of an equivalent transfer matrix, an optimization process for is proposed to replace the panel by a suitable set of layers.
Energy Technology Data Exchange (ETDEWEB)
Brown, Roslyn N.; Sanford, James A.; Park, Jea H.; Deatherage, Brooke L.; Champion, Boyd L.; Smith, Richard D.; Heffron, Fred; Adkins, Joshua N.
2012-06-01
Towards developing a systems-level pathobiological understanding of Salmonella enterica, we performed a subcellular proteomic analysis of this pathogen grown under standard laboratory and infection-mimicking conditions in vitro. Analysis of proteins from cytoplasmic, inner membrane, periplasmic, and outer membrane fractions yielded coverage of over 30% of the theoretical proteome. Confident subcellular location could be assigned to over 1000 proteins, with good agreement between experimentally observed location and predicted/known protein properties. Comparison of protein location under the different environmental conditions provided insight into dynamic protein localization and possible moonlighting (multiple function) activities. Notable examples of dynamic localization were the response regulators of two-component regulatory systems (e.g., ArcB, PhoQ). The DNA-binding protein Dps that is generally regarded as cytoplasmic was significantly enriched in the outer membrane for all growth conditions examined, suggestive of moonlighting activities. These observations imply the existence of unknown transport mechanisms and novel functions for a subset of Salmonella proteins. Overall, this work provides a catalog of experimentally verified subcellular protein location for Salmonella and a framework for further investigations using computational modeling.
A CFD numerical model for the flow distribution in a MTR fuel element
International Nuclear Information System (INIS)
Andrade, Delvonei Alves de; Santos, Pedro Henrique Di Giovanni; Oliveira, Fabio Branco Vaz de; Torres, Walmir Maximo; Umbehaun, Pedro Ernesto; Souza, Jose Antonio Batista de; Belchior Junior, Antonio; Sabundjian, Gaiane; Prado, Adelk de Carvalho; Angelo, Gabriel
2015-01-01
Previously, an instrumented dummy fuel element (DMPV-01), with the same geometric characteristics of a MTR fuel element, was designed and constructed for pressure drop and flow distribution measurement experiments at the IEA-R1 reactor core. This dummy element was also used to measure the flow distribution among the rectangular flow channels formed by element fuel plates. A CFD numerical model was developed to complement the studies. This work presents the proposed CFD model as well as a comparison between numerical and experimental results of flow rate distribution among the internal flow channels. Numerical results show that the model reproduces the experiments very well and can be used for the studies as a more convenient and complementary tool. (author)
A CFD numerical model for the flow distribution in a MTR fuel element
Energy Technology Data Exchange (ETDEWEB)
Andrade, Delvonei Alves de; Santos, Pedro Henrique Di Giovanni; Oliveira, Fabio Branco Vaz de; Torres, Walmir Maximo; Umbehaun, Pedro Ernesto; Souza, Jose Antonio Batista de; Belchior Junior, Antonio; Sabundjian, Gaiane; Prado, Adelk de Carvalho, E-mail: acprado@ipen.br, E-mail: delvonei@ipen.br, E-mail: dpedro_digiovanni_s@hotmail.com, E-mail: fabio@ipen.br, E-mail: wmtorres@ipen.br, E-mail: umbehaun@ipen.br, E-mail: jasouza@ipen.br, E-mail: abelchior@ipen.br, E-mail: gdjian@ipen.br [Instituto de Pesquisas Energeticas e Nucleares (IPEN/CNEN-SP), Sao Paulo, SP (Brazil). Centro de Engenharia Nuclear; Angelo, Edvaldo, E-mail: eangelo@mackenzie.br [Universidade Presbiteriana Mackenzie, Sao Paulo, SP (Brazil); Angelo, Gabriel, E-mail: gangelo@fei.edu.br [Fundacao Educacional Inaciana (FEI), Sao Bernardo do Campo, SP (Brazil)
2015-07-01
Previously, an instrumented dummy fuel element (DMPV-01), with the same geometric characteristics of a MTR fuel element, was designed and constructed for pressure drop and flow distribution measurement experiments at the IEA-R1 reactor core. This dummy element was also used to measure the flow distribution among the rectangular flow channels formed by element fuel plates. A CFD numerical model was developed to complement the studies. This work presents the proposed CFD model as well as a comparison between numerical and experimental results of flow rate distribution among the internal flow channels. Numerical results show that the model reproduces the experiments very well and can be used for the studies as a more convenient and complementary tool. (author)
Structural elements regulating amyloidogenesis: a cholinesterase model system.
Directory of Open Access Journals (Sweden)
Létitia Jean
2008-03-01
Full Text Available Polymerization into amyloid fibrils is a crucial step in the pathogenesis of neurodegenerative syndromes. Amyloid assembly is governed by properties of the sequence backbone and specific side-chain interactions, since fibrils from unrelated sequences possess similar structures and morphologies. Therefore, characterization of the structural determinants driving amyloid aggregation is of fundamental importance. We investigated the forces involved in the amyloid assembly of a model peptide derived from the oligomerization domain of acetylcholinesterase (AChE, AChE(586-599, through the effect of single point mutations on beta-sheet propensity, conformation, fibrilization, surfactant activity, oligomerization and fibril morphology. AChE(586-599 was chosen due to its fibrilization tractability and AChE involvement in Alzheimer's disease. The results revealed how specific regions and residues can control AChE(586-599 assembly. Hydrophobic and/or aromatic residues were crucial for maintaining a high beta-strand propensity, for the conformational transition to beta-sheet, and for the first stage of aggregation. We also demonstrated that positively charged side-chains might be involved in electrostatic interactions, which could control the transition to beta-sheet, the oligomerization and assembly stability. Further interactions were also found to participate in the assembly. We showed that some residues were important for AChE(586-599 surfactant activity and that amyloid assembly might preferentially occur at an air-water interface. Consistently with the experimental observations and assembly models for other amyloid systems, we propose a model for AChE(586-599 assembly in which a steric-zipper formed through specific interactions (hydrophobic, electrostatic, cation-pi, SH-aromatic, metal chelation and polar-polar would maintain the beta-sheets together. We also propose that the stacking between the strands in the beta-sheets along the fiber axis could
Straightened cervical lordosis causes stress concentration: a finite element model study
Energy Technology Data Exchange (ETDEWEB)
Wei, Wei; Shi, Shiyuan; Fei, Jun; Wang, Yifan; Chen, Chunyue [Hangzhou Red Cross Hospital, Hangzhou, Zhejiang, (China); Liao, Shenhui [School of Information Science and Engineering, Central South University, Changsha, Hunan (China)
2013-03-15
In this study, we propose a finite element analysis of the complete cervical spine with straightened and normal physiological curvature by using a specially designed modelling system. An accurate finite element model is established to recommend plausible approaches to treatment of cervical spondylosis through the finite element analysis results. There are few reports of biomechanics influence of the straightened cervical curve. It is difficult to measure internal responses of cervical spine directly. However, the finite element method has been reported to have the capability to quantify both external and internal responses to mechanical loading, such as the strain and stress distribution of spinal components. We choose a subject with a straightened cervical spine from whom to collect the CT scan data, which formed the basis of the finite element analysis. By using a specially designed modelling system, a high quality finite element model of the complete cervical spine with straightened curvature was generated, which was then mapped to reconstruct a normal physiological curvature model by a volumetric mesh deformation method based on discrete differential properties. Then, the same boundary conditions were applied to do a comparison. The result demonstrated that the active movement range of straightened cervical spine decreased by 24–33 %, but the stress increased by 5–95 %. The stress was concentrated at the facet joint cartilage, uncovertebral joint and the disk. The results suggest that cervical lordosis may have a direct impact on cervical spondylosis treatment. These results may be useful for clinical treatment of cervical spondylosis with straightened curvature.
Straightened cervical lordosis causes stress concentration: a finite element model study
International Nuclear Information System (INIS)
Wei, Wei; Shi, Shiyuan; Fei, Jun; Wang, Yifan; Chen, Chunyue; Liao, Shenhui
2013-01-01
In this study, we propose a finite element analysis of the complete cervical spine with straightened and normal physiological curvature by using a specially designed modelling system. An accurate finite element model is established to recommend plausible approaches to treatment of cervical spondylosis through the finite element analysis results. There are few reports of biomechanics influence of the straightened cervical curve. It is difficult to measure internal responses of cervical spine directly. However, the finite element method has been reported to have the capability to quantify both external and internal responses to mechanical loading, such as the strain and stress distribution of spinal components. We choose a subject with a straightened cervical spine from whom to collect the CT scan data, which formed the basis of the finite element analysis. By using a specially designed modelling system, a high quality finite element model of the complete cervical spine with straightened curvature was generated, which was then mapped to reconstruct a normal physiological curvature model by a volumetric mesh deformation method based on discrete differential properties. Then, the same boundary conditions were applied to do a comparison. The result demonstrated that the active movement range of straightened cervical spine decreased by 24–33 %, but the stress increased by 5–95 %. The stress was concentrated at the facet joint cartilage, uncovertebral joint and the disk. The results suggest that cervical lordosis may have a direct impact on cervical spondylosis treatment. These results may be useful for clinical treatment of cervical spondylosis with straightened curvature.
Finite element model updating of natural fibre reinforced composite structure in structural dynamics
Directory of Open Access Journals (Sweden)
Sani M.S.M.
2016-01-01
Full Text Available Model updating is a process of making adjustment of certain parameters of finite element model in order to reduce discrepancy between analytical predictions of finite element (FE and experimental results. Finite element model updating is considered as an important field of study as practical application of finite element method often shows discrepancy to the test result. The aim of this research is to perform model updating procedure on a composite structure as well as trying improving the presumed geometrical and material properties of tested composite structure in finite element prediction. The composite structure concerned in this study is a plate of reinforced kenaf fiber with epoxy. Modal properties (natural frequency, mode shapes, and damping ratio of the kenaf fiber structure will be determined using both experimental modal analysis (EMA and finite element analysis (FEA. In EMA, modal testing will be carried out using impact hammer test while normal mode analysis using FEA will be carried out using MSC. Nastran/Patran software. Correlation of the data will be carried out before optimizing the data from FEA. Several parameters will be considered and selected for the model updating procedure.
Elements of complexity in subsurface modeling, exemplified with three case studies
Energy Technology Data Exchange (ETDEWEB)
Freedman, Vicky L. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Truex, Michael J. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Rockhold, Mark [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Bacon, Diana H. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Freshley, Mark D. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Wellman, Dawn M. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
2017-04-03
There are complexity elements to consider when applying subsurface flow and transport models to support environmental analyses. Modelers balance the benefits and costs of modeling along the spectrum of complexity, taking into account the attributes of more simple models (e.g., lower cost, faster execution, easier to explain, less mechanistic) and the attributes of more complex models (higher cost, slower execution, harder to explain, more mechanistic and technically defensible). In this paper, modeling complexity is examined with respect to considering this balance. The discussion of modeling complexity is organized into three primary elements: 1) modeling approach, 2) description of process, and 3) description of heterogeneity. Three examples are used to examine these complexity elements. Two of the examples use simulations generated from a complex model to develop simpler models for efficient use in model applications. The first example is designed to support performance evaluation of soil vapor extraction remediation in terms of groundwater protection. The second example investigates the importance of simulating different categories of geochemical reactions for carbon sequestration and selecting appropriate simplifications for use in evaluating sequestration scenarios. In the third example, the modeling history for a uranium-contaminated site demonstrates that conservative parameter estimates were inadequate surrogates for complex, critical processes and there is discussion on the selection of more appropriate model complexity for this application. All three examples highlight how complexity considerations are essential to create scientifically defensible models that achieve a balance between model simplification and complexity.
Ju, Yun-Ru; Yang, Ying-Fei; Tsai, Jeng-Wei; Cheng, Yi-Hsien; Chen, Wei-Yu; Liao, Chung-Min
2017-07-01
Fluctuation exposure of trace metal copper (Cu) is ubiquitous in aquatic environments. The purpose of this study was to investigate the impacts of chronically pulsed exposure on biodynamics and subcellular partitioning of Cu in freshwater tilapia (Oreochromis mossambicus). Long-term 28-day pulsed Cu exposure experiments were performed to explore subcellular partitioning and toxicokinetics/toxicodynamics of Cu in tilapia. Subcellular partitioning linking with a metal influx scheme was used to estimate detoxification and elimination rates. A biotic ligand model-based damage assessment model was used to take into account environmental effects and biological mechanisms of Cu toxicity. We demonstrated that the probability causing 50% of susceptibility risk in response to pulse Cu exposure in generic Taiwan aquaculture ponds was ~33% of Cu in adverse physiologically associated, metabolically active pool, implicating no significant susceptibility risk for tilapia. We suggest that our integrated ecotoxicological models linking chronic exposure measurements with subcellular partitioning can facilitate a risk assessment framework that provides a predictive tool for preventive susceptibility reduction strategies for freshwater fish exposed to pulse metal stressors.
Micromechanical Failure Analyses for Finite Element Polymer Modeling
Energy Technology Data Exchange (ETDEWEB)
CHAMBERS,ROBERT S.; REEDY JR.,EARL DAVID; LO,CHI S.; ADOLF,DOUGLAS B.; GUESS,TOMMY R.
2000-11-01
Polymer stresses around sharp corners and in constrained geometries of encapsulated components can generate cracks leading to system failures. Often, analysts use maximum stresses as a qualitative indicator for evaluating the strength of encapsulated component designs. Although this approach has been useful for making relative comparisons screening prospective design changes, it has not been tied quantitatively to failure. Accurate failure models are needed for analyses to predict whether encapsulated components meet life cycle requirements. With Sandia's recently developed nonlinear viscoelastic polymer models, it has been possible to examine more accurately the local stress-strain distributions in zones of likely failure initiation looking for physically based failure mechanisms and continuum metrics that correlate with the cohesive failure event. This study has identified significant differences between rubbery and glassy failure mechanisms that suggest reasonable alternatives for cohesive failure criteria and metrics. Rubbery failure seems best characterized by the mechanisms of finite extensibility and appears to correlate with maximum strain predictions. Glassy failure, however, seems driven by cavitation and correlates with the maximum hydrostatic tension. Using these metrics, two three-point bending geometries were tested and analyzed under variable loading rates, different temperatures and comparable mesh resolution (i.e., accuracy) to make quantitative failure predictions. The resulting predictions and observations agreed well suggesting the need for additional research. In a separate, additional study, the asymptotically singular stress state found at the tip of a rigid, square inclusion embedded within a thin, linear elastic disk was determined for uniform cooling. The singular stress field is characterized by a single stress intensity factor K{sub a} and the applicable K{sub a} calibration relationship has been determined for both fully bonded and
Finite element modelling of aluminum alloy 2024-T3 under transverse impact loading
Abdullah, Ahmad Sufian; Kuntjoro, Wahyu; Yamin, A. F. M.
2017-12-01
Fiber metal laminate named GLARE is a new aerospace material which has great potential to be widely used in future lightweight aircraft. It consists of aluminum alloy 2024-T3 and glass-fiber reinforced laminate. In order to produce reliable finite element model of impact response or crashworthiness of structure made of GLARE, one can initially model and validate the finite element model of the impact response of its constituents separately. The objective of this study was to develop a reliable finite element model of aluminum alloy 2024-T3 under low velocity transverse impact loading using commercial software ABAQUS. Johnson-Cook plasticity and damage models were used to predict the alloy's material properties and impact behavior. The results of the finite element analysis were compared to the experiment that has similar material and impact conditions. Results showed good correlations in terms of impact forces, deformation and failure progressions which concluded that the finite element model of 2024-T3 aluminum alloy under low velocity transverse impact condition using Johnson-Cook plastic and damage models was reliable.
Subcellular site and nature of intracellular cadmium in plants
International Nuclear Information System (INIS)
Wagner, G.J.
1979-01-01
The mechanisms underlying heavy metal accumulation, toxicity and tolerance in higher plants are poorly understood. Since subcellular processes are undoubtedly involved in all these phenomena, it is of interest to study the extent of, subcellular site of and nature of intracellularly accumulated cadmium in higher plants. Whole plants supplied 109 CdCl 2 or 112 CdSO 4 accumulated Cd into roots and aerial tissues. Preparation of protoplasts from aerial tissue followed by subcellular fractionation of the protoplasts to obtain intact vacuoles, chloroplasts and cytosol revealed the presence of Cd in the cytosol but not in vacuoles or chloroplasts. Particulate materials containing other cell components were also labeled. Of the 109 Cd supplied to plants, 2 to 10% was recovered in both cytosol preparations and in particulate materials. Cytosol contained proteinaceous--Cd complexes, free metal and low molecular weight Cd complexes. Labeling of protoplasts gave similar results. No evidence was obtained for the production of volatile Cd complexes in tobacco
Protein subcellular localization assays using split fluorescent proteins
Waldo, Geoffrey S [Santa Fe, NM; Cabantous, Stephanie [Los Alamos, NM
2009-09-08
The invention provides protein subcellular localization assays using split fluorescent protein systems. The assays are conducted in living cells, do not require fixation and washing steps inherent in existing immunostaining and related techniques, and permit rapid, non-invasive, direct visualization of protein localization in living cells. The split fluorescent protein systems used in the practice of the invention generally comprise two or more self-complementing fragments of a fluorescent protein, such as GFP, wherein one or more of the fragments correspond to one or more beta-strand microdomains and are used to "tag" proteins of interest, and a complementary "assay" fragment of the fluorescent protein. Either or both of the fragments may be functionalized with a subcellular targeting sequence enabling it to be expressed in or directed to a particular subcellular compartment (i.e., the nucleus).
Lee, Jaehoon; Hulse, Nathan C; Wood, Grant M; Oniki, Thomas A; Huff, Stanley M
2016-01-01
In this study we developed a Fast Healthcare Interoperability Resources (FHIR) profile to support exchanging a full pedigree based family health history (FHH) information across multiple systems and applications used by clinicians, patients, and researchers. We used previously developed clinical element models (CEMs) that are capable of representing the FHH information, and derived essential data elements including attributes, constraints, and value sets. We analyzed gaps between the FHH CEM elements and existing FHIR resources. Based on the analysis, we developed a profile that consists of 1) FHIR resources for essential FHH data elements, 2) extensions for additional elements that were not covered by the resources, and 3) a structured definition to integrate patient and family member information in a FHIR message. We implemented the profile using an open-source based FHIR framework and validated it using patient-entered FHH data that was captured through a locally developed FHH tool.
Efficient Analysis of Structures with Rotatable Elements Using Model Order Reduction
Directory of Open Access Journals (Sweden)
G. Fotyga
2016-04-01
Full Text Available This paper presents a novel full-wave technique which allows for a fast 3D finite element analysis of waveguide structures containing rotatable tuning elements of arbitrary shapes. Rotation of these elements changes the resonant frequencies of the structure, which can be used in the tuning process to obtain the S-characteristics desired for the device. For fast commutations of the response as the tuning elements are rotated, the 3D finite element method is supported by multilevel model-order reduction, orthogonal projection at the boundaries of macromodels and the operation called macromodels cloning. All the time-consuming steps are performed only once in the preparatory stage. In the tuning stage, only small parts of the domain are updated, by means of a special meshing technique. In effect, the tuning process is performed extremely rapidly. The results of the numerical experiments confirm the efficiency and validity of the proposed method.
A parametric model order reduction technique for poroelastic finite element models.
Lappano, Ettore; Polanz, Markus; Desmet, Wim; Mundo, Domenico
2017-10-01
This research presents a parametric model order reduction approach for vibro-acoustic problems in the frequency domain of systems containing poroelastic materials (PEM). The method is applied to the Finite Element (FE) discretization of the weak u-p integral formulation based on the Biot-Allard theory and makes use of reduced basis (RB) methods typically employed for parametric problems. The parametric reduction is obtained rewriting the Biot-Allard FE equations for poroelastic materials using an affine representation of the frequency (therefore allowing for RB methods) and projecting the frequency-dependent PEM system on a global reduced order basis generated with the proper orthogonal decomposition instead of standard modal approaches. This has proven to be better suited to describe the nonlinear frequency dependence and the strong coupling introduced by damping. The methodology presented is tested on two three-dimensional systems: in the first experiment, the surface impedance of a PEM layer sample is calculated and compared with results of the literature; in the second, the reduced order model of a multilayer system coupled to an air cavity is assessed and the results are compared to those of the reference FE model.
Wang, Q; Yang, Y; Fei, Q; Li, D; Li, J J; Meng, H; Su, N; Fan, Z H; Wang, B Q
2017-06-06
Objective: To build a three-dimensional finite element models of a modified posterior cervical single open-door laminoplasty with short-segmental lateral mass screws fusion. Methods: The C(2)-C(7) segmental data were obtained from computed tomography (CT) scans of a male patient with cervical spondylotic myelopathy and spinal stenosis.Three-dimensional finite element models of a modified cervical single open-door laminoplasty (before and after surgery) were constructed by the combination of software package MIMICS, Geomagic and ABAQUS.The models were composed of bony vertebrae, articulating facets, intervertebral disc and associated ligaments.The loads of moments 1.5Nm at different directions (flexion, extension, lateral bending and axial rotation)were applied at preoperative model to calculate intersegmental ranges of motion.The results were compared with the previous studies to verify the validation of the models. Results: Three-dimensional finite element models of the modified cervical single open- door laminoplasty had 102258 elements (preoperative model) and 161 892 elements (postoperative model) respectively, including C(2-7) six bony vertebraes, C(2-3)-C(6-7) five intervertebral disc, main ligaments and lateral mass screws.The intersegmental responses at the preoperative model under the loads of moments 1.5 Nm at different directions were similar to the previous published data. Conclusion: Three-dimensional finite element models of the modified cervical single open- door laminoplasty were successfully established and had a good biological fidelity, which can be used for further study.
The modeling experience of fuel element units operation under MSC.MARC and MENTAT 2008R1
International Nuclear Information System (INIS)
Kulakov, G.; Kashirin, B.; Kosaurov, A.; Konovalov, Y.; Kuznetsov, A.; Medvedev, A.; Novikov, V.; Vatulin, A.
2009-01-01
MSC Software is leading developer of CAE-software in the world, so behaviour of fuel elements modeling with MSC.MARC use is of great practical importance. Behaviour of fuel elements usually is modeled in the elastic-viscous-plastic statement with account on fuel swelling during irradiation. For container type fuel elements contact interaction between fuel pellets and cladding or other parts of fuel element in top and bottom plugs must be in account. Results of simulated behaviour of various type fuel elements - container type fuel elements for PWR and RBMK reactors, dispersion type fuel elements for research reactors are presented. (authors)
Biomechanics of subcellular structures by non-invasive Brillouin microscopy
Antonacci, Giuseppe; Braakman, Sietse
2016-11-01
Cellular biomechanics play a pivotal role in the pathophysiology of several diseases. Unfortunately, current methods to measure biomechanical properties are invasive and mostly limited to the surface of a cell. As a result, the mechanical behaviour of subcellular structures and organelles remains poorly characterised. Here, we show three-dimensional biomechanical images of single cells obtained with non-invasive, non-destructive Brillouin microscopy with an unprecedented spatial resolution. Our results quantify the longitudinal elastic modulus of subcellular structures. In particular, we found the nucleoli to be stiffer than both the nuclear envelope (p biomechanics and its role in pathophysiology.
Neptunium 237 behaviour in subcellular fractions of rat kidneys
International Nuclear Information System (INIS)
Kreslov, V.V.; Maksutova, A.Ya.; Mushkacheva, G.S.
1978-01-01
Subcellular distribution of intravenously injected (1 and 0.5 μCi/rat) neptunium nitrate (5- and 6-valent) in kidneys of rat males and females has been investigated. It has been shown that the radionuclide was unevenly distributed within the cell. As early as 24 hours after administration, about 50 per cent of neptunium were concentrated in the mitochondrial fraction. The data are presented on variations in neptunium behaviour within subcellular fractions of rat kidneys depending on the sex of animals, valency and dose of the isotope
Dynamics Modeling and Analysis of Local Fault of Rolling Element Bearing
Directory of Open Access Journals (Sweden)
Lingli Cui
2015-01-01
Full Text Available This paper presents a nonlinear vibration model of rolling element bearings with 5 degrees of freedom based on Hertz contact theory and relevant bearing knowledge of kinematics and dynamics. The slipping of ball, oil film stiffness, and the nonlinear time-varying stiffness of the bearing are taken into consideration in the model proposed here. The single-point local fault model of rolling element bearing is introduced into the nonlinear model with 5 degrees of freedom according to the loss of the contact deformation of ball when it rolls into and out of the local fault location. The functions of spall depth corresponding to defects of different shapes are discussed separately in this paper. Then the ode solver in Matlab is adopted to perform a numerical solution on the nonlinear vibration model to simulate the vibration response of the rolling elements bearings with local fault. The simulation signals analysis results show a similar behavior and pattern to that observed in the processed experimental signals of rolling element bearings in both time domain and frequency domain which validated the nonlinear vibration model proposed here to generate typical rolling element bearings local fault signals for possible and effective fault diagnostic algorithms research.
Nazari, Mohammad Ali; Perrier, Pascal; Payan, Yohan
2013-01-01
Purpose: The authors aimed to design a distributed lambda model (DLM), which is well adapted to implement three-dimensional (3-D), finite-element descriptions of muscles. Method: A muscle element model was designed. Its stress-strain relationships included the active force-length characteristics of the ? model along the muscle fibers, together…
European column buckling curves and finite element modelling including high strength steels
DEFF Research Database (Denmark)
Jönsson, Jeppe; Stan, Tudor-Cristian
2017-01-01
Eurocode allows for finite element modelling of plated steel structures, however the information in the code on how to perform the analysis or what assumptions to make is quite sparse. The present paper investigates the deterministic modelling of flexural column buckling using plane shell elements...... imperfections may be very conservative if considered by finite element analysis as described in the current Eurocode code. A suggestion is given for a slightly modified imperfection formula within the Ayrton-Perry formulation leading to adequate inclusion of modern high grade steels within the original four...... bucking curves. It is also suggested that finite element or frame analysis may be performed with equivalent column bow imperfections extracted directly from the Ayrton-Perry formulation....
Heat transfer model and finite element formulation for simulation of selective laser melting
Roy, Souvik; Juha, Mario; Shephard, Mark S.; Maniatty, Antoinette M.
2017-10-01
A novel approach and finite element formulation for modeling the melting, consolidation, and re-solidification process that occurs in selective laser melting additive manufacturing is presented. Two state variables are introduced to track the phase (melt/solid) and the degree of consolidation (powder/fully dense). The effect of the consolidation on the absorption of the laser energy into the material as it transforms from a porous powder to a dense melt is considered. A Lagrangian finite element formulation, which solves the governing equations on the unconsolidated reference configuration is derived, which naturally considers the effect of the changing geometry as the powder melts without needing to update the simulation domain. The finite element model is implemented into a general-purpose parallel finite element solver. Results are presented comparing to experimental results in the literature for a single laser track with good agreement. Predictions for a spiral laser pattern are also shown.
Solid Modeling and Finite Element Analysis of an Overhead Crane Bridge
Directory of Open Access Journals (Sweden)
C. Alkin
2005-01-01
Full Text Available The design of an overhead crane bridge with a double box girder has been investigated and a case study of a crane with 35 ton capacity and 13 m span length has been conducted. In the initial phase of the case study, conventional design calculations proposed by F. E. M. Rules and DIN standards were performed to verify the stress and deflection levels. The crane design was modeled using both solids and surfaces. Finite element meshes with 4-node tetrahedral and 4-node quadrilateral shell elements were generated from the solid and shell models, respectively. After a comparison of the finite element analyses, the conventional calculations and performance of the existing crane, the analysis with quadratic shell elements was found to give the most realistic results. As a result of this study, a design optimization method for an overhead crane is proposed.
Three-dimensional linear fracture mechanics analysis by a displacement-hybrid finite-element model
International Nuclear Information System (INIS)
Atluri, S.N.; Kathiresan, K.; Kobayashi, A.S.
1975-01-01
This paper deals with a finite-element procedures for the calculation of modes I, II and III stress intensity factors, which vary, along an arbitrarily curved three-dimensional crack front in a structural component. The finite-element model is based on a modified variational principle of potential energy with relaxed continuity requirements for displacements at the inter-element boundary. The variational principle is a three-field principle, with the arbitrary interior displacements for the element, interelement boundary displacements, and element boundary tractions as variables. The unknowns in the final algebraic system of equations, in the present displacement hybrid finite element model, are the nodal displacements and the three elastic stress intensity factors. Special elements, which contain proper square root and inverse square root crack front variations in displacements and stresses, respectively, are used in a fixed region near the crack front. Interelement displacement compatibility is satisfied by assuming an independent interelement boundary displacement field, and using a Lagrange multiplier technique to enforce such interelement compatibility. These Lagrangean multipliers, which are physically the boundary tractions, are assumed from an equilibrated stress field derived from three-dimensional Beltrami (or Maxwell-Morera) stress functions that are complete. However, considerable care should be exercised in the use of these stress functions such that the stresses produced by any of these stress function components are not linearly dependent
3-dimensional finite element modelling of reactor building internal structure for static analysis
International Nuclear Information System (INIS)
Joshi, M.H.; Reddy, V.J.; Kushwaha, H.S.; Reddy, G.R.; Karandikar, G.V.
1991-01-01
a) Thin shell element gives fairly accurate results when compared to 3-D Brick element for the type of structure and loading in Reactor Building. b) The maximum element size is fixed from model 3(c) i.e. 2.0 m. c) Openings with size smaller than 0.5 m can be neglected without affecting the results very much. d) For any such problem, the methodology described in this paper can be used to take rational decisions which will ensure reasonable accuracy. (author)
A finite element modeling method for predicting long term corrosion rates
International Nuclear Information System (INIS)
Fu, J.W.; Chan, S.
1984-01-01
For the analyses of galvanic corrosion, pitting and crevice corrosion, which have been identified as possible corrosion processes for nuclear waste isolation, a finite element method has been developed for the prediction of corrosion rates. The method uses a finite element mesh to model the corrosive environment and the polarization curves of metals are assigned as the boundary conditions to calculate the corrosion cell current distribution. A subroutine is used to calculate the chemical change with time in the crevice or the pit environments. In this paper, the finite element method is described along with experimental confirmation
Directory of Open Access Journals (Sweden)
Flávio Luiz de Silva Bussamra
Full Text Available Abstract Hybrid quasi-Trefftz finite elements have been applied with success to the analysis of laminated plates. Two independent fields are approximated by linearly independent, hierarchical polynomials: the stress basis in the domain, adapted from Papkovitch-Neuber solution of Navier equations, and the displacement basis, defined on element surface. The stress field that satisfies the Trefftz constraint a priori for isotropic material is adapted for orthotropic materials, which leads to the term "quasi". In this work, the hexahedral hybrid quasi-Trefftz stress element is applied to the modeling of nonsymmetric laminates and laminated composite plates with geometric discontinuities. The hierarchical p-refinement is exploited.
Hadron matrix elements of quark operators in the relativistic quark model
Energy Technology Data Exchange (ETDEWEB)
Bando, Masako; Toya, Mihoko [Kyoto Univ. (Japan). Dept. of Physics; Sugimoto, Hiroshi
1979-07-01
General formulae for evaluating matrix elements of two- and four-quark operators sandwiched by one-hadron states are presented on the basis of the relativistic quark model. Observed hadronic quantities are expressed in terms of those matrix elements of two- and four-quark operators. One observes various type of relativistic expression for the matrix elements which in the non-relativistic case reduce to simple expression of the so-called ''the wave function at the origin /sup +/psi(0)/sup +/''.
A sliding point contact model for the finite element structures code EURDYN
International Nuclear Information System (INIS)
Smith, B.L.
1986-01-01
A method is developed by which sliding point contact between two moving deformable structures may be incorporated within a lumped mass finite element formulation based on displacements. The method relies on a simple mechanical interpretation of the contact constraint in terms of equivalent nodal forces and avoids the use of nodal connectivity via a master slave arrangement or pseudo contact element. The methodology has been iplemented into the EURDYN finite element program for the (2D axisymmetric) version coupled to the hydro code SEURBNUK. Sample calculations are presented illustrating the use of the model in various contact situations. Effects due to separation and impact of structures are also included. (author)
DEFF Research Database (Denmark)
Kiel, Nikolaj; Andersen, Lars Vabbersgaard; Niu, Bin
2012-01-01
. With the number of modules in the three axial directions defined, wall and floor panels are constructed, placed and coupled in the global model. The core of this modular finite element model consists of connecting the different panels to each other in a rational manner, where the accuracy is as high as possible......, with as many applications as possible, for the least possible computational cost. The coupling method of the structural panels in the above mentioned modular finite element model is in this paper discussed and evaluated. The coupling of the panels are performed using the commercial finite element program....... In this way a well-defined master geometry is present onto which all panels can be tied. But as the skeleton is an element itself, it will have a physical mass and a corresponding stiffness to be included in the linear system of equations. This means that the skeleton will influence the structure...
Finite element prediction of the swift effect based on Taylor-type polycrystal plasticity models
Duchene, Laurent; Delannay, L.; Habraken, Anne
2004-01-01
This paper describes the main concepts of the stress-strain interpolation model that has been implemented in the non-linear finite element code Lagamine. This model consists in a local description of the yield locus based on the texture of the material through the full constraints Taylor’s model. The prediction of the Swift effect is investigated: the influence of the texture evolution is shown up. The LAMEL model is also investigated for the Swift effect prediction. Peer reviewed
A review on application of finite element modelling in bone biomechanics
Directory of Open Access Journals (Sweden)
Sandeep Kumar Parashar
2016-09-01
Full Text Available In the past few decades the finite element modelling has been developed as an effective tool for modelling and simulation of the biomedical engineering system. Finite element modelling (FEM is a computational technique which can be used to solve the biomedical engineering problems based on the theories of continuum mechanics. This paper presents the state of art review on finite element modelling application in the four areas of bone biomechanics, i.e., analysis of stress and strain, determination of mechanical properties, fracture fixation design (implants, and fracture load prediction. The aim of this review is to provide a comprehensive detail about the development in the area of application of FEM in bone biomechanics during the last decades. It will help the researchers and the clinicians alike for the better treatment of patients and future development of new fixation designs.
Cohesive Modeling of Transverse Cracking in Laminates with a Single Layer of Elements per Ply
VanDerMeer, Frans P.; Davila, Carlos G.
2013-01-01
This study aims to bridge the gap between classical understanding of transverse cracking in cross-ply laminates and recent computational methods for the modeling of progressive laminate failure. Specifically, the study investigates under what conditions a finite element model with cohesive X-FEM cracks can reproduce the in situ effect for the ply strength. It is shown that it is possible to do so with a single element across the thickness of the ply, provided that the interface stiffness is properly selected. The optimal value for this interface stiffness is derived with an analytical shear lag model. It is also shown that, when the appropriate statistical variation of properties has been applied, models with a single element through the thickness of a ply can predict the density of transverse matrix cracks
International Nuclear Information System (INIS)
Lassmann, K.
1991-01-01
Fuel element modelling is a wide field of activity that spans decades of research and code development for different reactor systems and very different situations such as normal operation, off-normal situations and severe accidents. Modern computer technology helps to take the full advantage of detailed model development performed over the past for daily design analyses, safety analyses, conception of new experiments and investigation of an improved nuclear fuel utilization and fuel element performance. The basic development of the concepts of fuel element modelling can be considered as finished. The future trends are the development of refined models based on a deeper understanding of the physical and mechanical basis. Areas of interest are transient phenomena especially the fission product behaviour, burnup-enhanced phenomena, PCI and fuel reliability, severe core damage and chemical aspects. The seminar presentations reflect this variety
International Nuclear Information System (INIS)
Choi, S. N.; Kim, H. N.; Jang, K. S.; Kim, H. J.
2000-01-01
The purpose of this paper is to determine a two dimensional axisymmetric model through a comparative study between a three dimensional and an axisymmetric finite element analysis of the reactor coolant piping nozzle subject to internal pressure. The finite element analysis results show that the stress adopting the axisymmetric model with the radius of equivalent spherical vessel are well agree with that adopting the three dimensional model. The radii of equivalent spherical vessel are 3.5 times and 7.3 times of the radius of the reactor coolant piping for the safety injection nozzle and for the residual heat removal nozzle, respectively
International Nuclear Information System (INIS)
Sim, J.; Soroushian, P.
1989-01-01
An improved model for predicting the reinforced concrete element behavior under dynamic strain rates was developed using the layer modeling technique. The developed strain rate sensitive model for axial/flexural analysis of reinforced concrete elements was used to predict the test results, performed at different loading rates, and the predictions were reasonable. The developed analysis technique was used to study the loading rate sensitivity of reinforced concrete beams and columns with different geometry and material properties. Two design formulas for computing the loading rate dependent axial and flexural strengths of reinforced concrete sections are suggested
International Nuclear Information System (INIS)
1983-03-01
The 46 papers of the meeting concerned with computer models of Water Reactor fuel elements cover practically all aspects of behavior of fuel elements in normal operation and in accident condition. Each session of the meeting produced a critical evaluation of one of the 5 topics into which the subject area had been divided. The sessions' report summarize the papers and make recommendations for further work. Separate abstracts were prepared for all the papers presented at this meeting
Lee, Jaehoon; Hulse, Nathan C.; Wood, Grant M.; Oniki, Thomas A.; Huff, Stanley M.
2017-01-01
In this study we developed a Fast Healthcare Interoperability Resources (FHIR) profile to support exchanging a full pedigree based family health history (FHH) information across multiple systems and applications used by clinicians, patients, and researchers. We used previously developed clinical element models (CEMs) that are capable of representing the FHH information, and derived essential data elements including attributes, constraints, and value sets. We analyzed gaps between the FHH CEM ...
Finite element analysis of a model scale footing on clean and oil contaminated sand
International Nuclear Information System (INIS)
Evgin, E.; Boulon, M.; Das, B.M.
1995-01-01
The effects of oil contamination on the behavior of a model scale footing is determined. Tests are carried out with both clean and oil contaminated sand. The data show that the bearing capacity of the footing is reduced significantly as a result of oil contamination. A finite element analysis is performed to calculate the bearing capacity of the footing and the results are compared with the experimental data. The significance of using an interface element in the analysis is discussed
Finite element modelling of creep process - steady state stresses and strains
Directory of Open Access Journals (Sweden)
Sedmak Aleksandar S.
2014-01-01
Full Text Available Finite element modelling of steady state creep process has been described. Using an analogy of visco-plastic problem with a described procedure, the finite element method has been used to calculate steady state stresses and strains in 2D problems. An example of application of such a procedure have been presented, using real life problem - cylindrical pipe with longitudinal crack at high temperature, under internal pressure, and estimating its residual life, based on the C*integral evaluation.
A high performance finite element model for wind farm modeling in forested areas
Owen, Herbert; Avila, Matias; Folch, Arnau; Cosculluela, Luis; Prieto, Luis
2015-04-01
Wind energy has grown significantly during the past decade and is expected to continue growing in the fight against climate change. In the search for new land where the impact of the wind turbines is small several wind farms are currently being installed in forested areas. In order to optimize the distribution of the wind turbines within the wind farm the Reynolds Averaged Navier Stokes equations are solved over the domain of interest using either commercial or in house codes. The existence of a canopy alters the Atmospheric Boundary Layer wind profile close to the ground. Therefore in order to obtain a more accurate representation of the flow in forested areas modification to both the Navier Stokes and turbulence variables equations need to be introduced. Several existing canopy models have been tested in an academic problem showing that the one proposed by Sogachev et. al gives the best results. This model has been implemented in an in house CFD solver named Alya. It is a high performance unstructured finite element code that has been designed from scratch to be able to run in the world's biggest supercomputers. Its scalabililty has recently been tested up to 100000 processors in both American and European supercomputers. During the past three years the code has been tuned and tested for wind energy problems. Recent efforts have focused on the canopy model following industry needs. In this work we shall benchmark our results in a wind farm that is currently being designed by Scottish Power and Iberdrola in Scotland. This is a very interesting real case with extensive experimental data from five different masts with anemometers at several heights. It is used to benchmark both the wind profiles and the speed up obtained between different masts. Sixteen different wind directions are simulated. The numerical model provides very satisfactory results for both the masts that are affected by the canopy and those that are not influenced by it.
Nonlinear transfer of elements from soil to plants: impact on radioecological modeling
Energy Technology Data Exchange (ETDEWEB)
Tuovinen, Tiina S.; Kolehmainen, Mikko; Roivainen, Paeivi; Kumlin, Timo; Makkonen, Sari; Holopainen, Toini; Juutilainen, Jukka [University of Eastern Finland, Department of Environmental and Biological Sciences, P.O. Box 1627, Kuopio (Finland)
2016-08-15
In radioecology, transfer of radionuclides from soil to plants is typically described by a concentration ratio (CR), which assumes linearity of transfer with soil concentration. Nonlinear uptake is evidenced in many studies, but it is unclear how it should be taken into account in radioecological modeling. In this study, a conventional CR-based linear model, a nonlinear model derived from observed uptake into plants, and a new simple model based on the observation that nonlinear uptake leads to a practically constant concentration in plant tissues are compared. The three models were used to predict transfer of {sup 234}U, {sup 59}Ni and {sup 210}Pb into spruce needles. The predictions of the nonlinear and the new model were essentially similar. In contrast, plant radionuclide concentration was underestimated by the linear model when the total element concentration in soil was relatively low, but within the range commonly observed in nature. It is concluded that the linear modeling could easily be replaced by a new approach that more realistically reflects the true processes involved in the uptake of elements into plants. The new modeling approach does not increase the complexity of modeling in comparison with CR-based linear models, and data needed for model parameters (element concentrations) are widely available. (orig.)
Real-time volumetric deformable models for surgery simulation using finite elements and condensation
DEFF Research Database (Denmark)
Bro-Nielsen, Morten; Cotin, S.
1996-01-01
This paper discusses the application of SD solid volumetric Finite Element models to surgery simulation. In particular it introduces three new ideas for solving the problem of achieving real-time performance for these models. The simulation system we have developed is described and we demonstrate...
Finite element based bladder modeling for image-guided radiotherapy of bladder cancer
Chai, Xiangfei; van Herk, Marcel; van de Kamer, Jeroen B.; Hulshof, Maarten C. C. M.; Remeijer, Peter; Lotz, Heidi T.; Bel, Arjan
2011-01-01
Purpose: A biomechanical model was constructed to give insight into pelvic organ motion as a result of bladder filling changes. Methods: The authors used finite element (FE) modeling to simulate bladder wall deformation caused by urine inflow. For ten volunteers, a series of MRI scans of the pelvic
Application of the Single Hardening Model in the Finite Element Program ABAQUS
DEFF Research Database (Denmark)
Jakobsen, Kim Parsberg
model, developed by Lade and Kim (Kim & Lade 1988, Lade & Kim 1988a, Lade & Kim 1988b) is implemented as a user defined material module, UMAT, in the commercial finite element program, ABAQUS. The advantages of the Single Hardening Model Iie in its ability to predict elastic and plastic displacements...
Finite element model updating of a small steel frame using neural networks
International Nuclear Information System (INIS)
Zapico, J L; González, M P; Alonso, R; González-Buelga, A
2008-01-01
This paper presents an experimental and analytical dynamic study of a small-scale steel frame. The experimental model was physically built and dynamically tested on a shaking table in a series of different configurations obtained from the original one by changing the mass and by causing structural damage. Finite element modelling and parameterization with physical meaning is iteratively tried for the original undamaged configuration. The finite element model is updated through a neural network, the natural frequencies of the model being the net input. The updating process is made more accurate and robust by using a regressive procedure, which constitutes an original contribution of this work. A novel simplified analytical model has been developed to evaluate the reduction of bending stiffness of the elements due to damage. The experimental results of the rest of the configurations have been used to validate both the updated finite element model and the analytical one. The statistical properties of the identified modal data are evaluated. From these, the statistical properties and a confidence interval for the estimated model parameters are obtained by using the Latin Hypercube sampling technique. The results obtained are successful: the updated model accurately reproduces the low modes identified experimentally for all configurations, and the statistical study of the transmission of errors yields a narrow confidence interval for all the identified parameters
Creating a Test-Validated Finite-Element Model of the X-56A Aircraft Structure
Pak, Chan-Gi; Truong, Samson
2014-01-01
Small modeling errors in a finite-element model will eventually induce errors in the structural flexibility and mass, thus propagating into unpredictable errors in the unsteady aerodynamics and the control law design. One of the primary objectives of the X-56A Multi-Utility Technology Testbed aircraft is the flight demonstration of active flutter suppression and, therefore, in this study, the identification of the primary and secondary modes for the structural model tuning based on the flutter analysis of the X-56A aircraft. The ground-vibration test-validated structural dynamic finite-element model of the X-56A aircraft is created in this study. The structural dynamic finite-element model of the X-56A aircraft is improved using a model-tuning tool. In this study, two different weight configurations of the X-56A aircraft have been improved in a single optimization run. Frequency and the cross-orthogonality (mode shape) matrix were the primary focus for improvement, whereas other properties such as c.g. location, total weight, and off-diagonal terms of the mass orthogonality matrix were used as constraints. The end result was an improved structural dynamic finite-element model configuration for the X-56A aircraft. Improved frequencies and mode shapes in this study increased average flutter speeds of the X-56A aircraft by 7.6% compared to the baseline model.
Creating a Test Validated Structural Dynamic Finite Element Model of the X-56A Aircraft
Pak, Chan-Gi; Truong, Samson
2014-01-01
Small modeling errors in the finite element model will eventually induce errors in the structural flexibility and mass, thus propagating into unpredictable errors in the unsteady aerodynamics and the control law design. One of the primary objectives of the Multi Utility Technology Test-bed, X-56A aircraft, is the flight demonstration of active flutter suppression, and therefore in this study, the identification of the primary and secondary modes for the structural model tuning based on the flutter analysis of the X-56A aircraft. The ground vibration test-validated structural dynamic finite element model of the X-56A aircraft is created in this study. The structural dynamic finite element model of the X-56A aircraft is improved using a model tuning tool. In this study, two different weight configurations of the X-56A aircraft have been improved in a single optimization run. Frequency and the cross-orthogonality (mode shape) matrix were the primary focus for improvement, while other properties such as center of gravity location, total weight, and offdiagonal terms of the mass orthogonality matrix were used as constraints. The end result was a more improved and desirable structural dynamic finite element model configuration for the X-56A aircraft. Improved frequencies and mode shapes in this study increased average flutter speeds of the X-56A aircraft by 7.6% compared to the baseline model.
A finite element model for the stress and flexibility analysis of curved pipes
International Nuclear Information System (INIS)
Guerreiro, J.N.C.
1987-03-01
We present a finite element model for the analysis of pipe bends with flanged ends or flanged tangents. Comments are made on the consideration of the internal pressure load. Flexibility and stress instensification factores obtained with the present model are compared with others available. (Author) [pt
Several advances in the analytic element method have been made to enhance its performance and facilitate three-dimensional ground-water flow modeling in a regional aquifer setting. First, a new public domain modular code (ModAEM) has been developed for modeling ground-water flow ...
International Nuclear Information System (INIS)
Jiujiang Zhao; Chunying Chen; Peiqun Zhang; Zhifang Chai
2004-01-01
Selenium and mercury distribution in porcine tissues and their subcellular fractions from a mercury-polluted area of Guizhou Province and from a not mercury-exposed area of Beijing in China have been studied with neutron activation analysis and hydride generation-atomic fluorescence spectrometry. Both the selenium and mercury levels are higher in Guizhou porcine tissues and their subcellular fractions than those in Beijing. These two elements are highly enriched in kidney and liver of Guizhou pig, while selenium is only enriched in the kidney of Beijing pig. Exposure of mercury may result in redistribution of Se and Hg in vivo. The Hg/Se molar ratio of the subcellular fractions is very low in the case of relatively low mercury level and gradually reaches to a high constant value with increasing level of mercury, which implies that selenium and mercury may form some special complexes in the organisms. (author)
Finite element modelling of different CANDU fuel bundle types in various refuelling conditions
International Nuclear Information System (INIS)
Roman, M. R.; Ionescu, D. V.; Olteanu, G.; Florea, S.; Radut, A. C.
2016-01-01
The objective of this paper is to develop a finite element model for static strength analysis of the CANDU standard with 37 elements fuel bundle and the SEU43 with 43 elements fuel bundle design for various refuelling conditions. The computer code, ANSYS7.1, is used to simulate the axial compression in CANDU type fuel bundles subject to hydraulic drag loads, deflection of fuel elements, stresses and displacements in the end plates. Two possible situations for the fuelling machine side stops are considered in our analyses, as follows: the last fuel bundle is supported by the two side stops and a side stop can be blocked therefore, the last fuel bundle is supported by only one side stop. The results of the analyses performed are briefly presented and also illustrated in a graphical form. The finite element model developed in present study is verified against test results for endplate displacement and element bowing obtained from strength tests with fuel bundle string and fuelling machine side-stop simulators. Comparison of ANSYS model predictions with these experimental results led to a very good agreement. Despite the difference in hydraulic load between SEU43 and CANDU standard fuel bundles strings, the maximum stress in the SEU43 endplate is about the same with the maximum stress in the CANDU standard endplate. The comparative assessment reveals that SEU43 fuel bundle is able to withstand high flow rate without showing a significant geometric instability. (authors)
Using a finite element pediatric hip model in clinical 2 evaluation - a feasibility study
DEFF Research Database (Denmark)
Skytte, T. L.; Mikkelsen, Lars Pilgaard; Sonne-Holm, Stig
2017-01-01
The paper describe a method to construct a finite element model of the hip joint of a child based on clinical recorded CT data. A model which can be used for diagnostic aid and pre-operative surgical evaluation. First part of this development is a feasibility study of this method. A scan...... to previous published experimental studies and computational models investigating the adult hip joint. Good correlation between the current model and previous models were found. The current case specific modeling technique may be a useful complement to the previously developed hip models....
A multi-element cosmological model with a complex space-time topology
Kardashev, N. S.; Lipatova, L. N.; Novikov, I. D.; Shatskiy, A. A.
2015-02-01
Wormhole models with a complex topology having one entrance and two exits into the same space-time of another universe are considered, as well as models with two entrances from the same space-time and one exit to another universe. These models are used to build a model of a multi-sheeted universe (a multi-element model of the "Multiverse") with a complex topology. Spherical symmetry is assumed in all the models. A Reissner-Norström black-hole model having no singularity beyond the horizon is constructed. The strength of the central singularity of the black hole is analyzed.
International Nuclear Information System (INIS)
Pan, Y.C.; Kennedy, J.M.
1983-01-01
In assessing the safety of a liquid metal fast breeder reactor (LMFBR), a major concern is that of hot sodium coming into contact with either unprotected concrete or steel-lined concrete equipment cells and containment structures. An aspect of this is the potential of concrete cracking which would significantly influence the safety assessment. Concrete cracking in finite element analysis can be modeled as a blunt crack in which the crack is assumed to be uniformly distributed throughout the area of the element. A blunt crack model based on the energy release rate and the effective strength concepts which was insensitive to the element size was presented by Bazant and Cedolin. Some difficulties were encountered in incorporating their approach into a general purpose finite element code. An approach based on the J-integral to circumvent some of the difficulties was proposed by Pan, Marchertas, and Kennedy. Alternatively, cracking can also be modeled as a sharp crack where the crack surface is treated as the boundary of the finite element mesh. The sharp crack model is adopted by most researchers and its J-integral has been well established. It is desirable to establish the correlation between the J-integrals, or the energy release rates, for the blunt crack model and the sharp crack model so that data obtained from one model can be used on the other
A comparison of 100 human genes using an alu element-based instability model.
Directory of Open Access Journals (Sweden)
George W Cook
Full Text Available The human retrotransposon with the highest copy number is the Alu element. The human genome contains over one million Alu elements that collectively account for over ten percent of our DNA. Full-length Alu elements are randomly distributed throughout the genome in both forward and reverse orientations. However, full-length widely spaced Alu pairs having two Alus in the same (direct orientation are statistically more prevalent than Alu pairs having two Alus in the opposite (inverted orientation. The cause of this phenomenon is unknown. It has been hypothesized that this imbalance is the consequence of anomalous inverted Alu pair interactions. One proposed mechanism suggests that inverted Alu pairs can ectopically interact, exposing both ends of each Alu element making up the pair to a potential double-strand break, or "hit". This hypothesized "two-hit" (two double-strand breaks potential per Alu element was used to develop a model for comparing the relative instabilities of human genes. The model incorporates both 1 the two-hit double-strand break potential of Alu elements and 2 the probability of exon-damaging deletions extending from these double-strand breaks. This model was used to compare the relative instabilities of 50 deletion-prone cancer genes and 50 randomly selected genes from the human genome. The output of the Alu element-based genomic instability model developed here is shown to coincide with the observed instability of deletion-prone cancer genes. The 50 cancer genes are collectively estimated to be 58% more unstable than the randomly chosen genes using this model. Seven of the deletion-prone cancer genes, ATM, BRCA1, FANCA, FANCD2, MSH2, NCOR1 and PBRM1, were among the most unstable 10% of the 100 genes analyzed. This algorithm may lay the foundation for comparing genetic risks posed by structural variations that are unique to specific individuals, families and people groups.
A comparison of 100 human genes using an alu element-based instability model.
Cook, George W; Konkel, Miriam K; Walker, Jerilyn A; Bourgeois, Matthew G; Fullerton, Mitchell L; Fussell, John T; Herbold, Heath D; Batzer, Mark A
2013-01-01
The human retrotransposon with the highest copy number is the Alu element. The human genome contains over one million Alu elements that collectively account for over ten percent of our DNA. Full-length Alu elements are randomly distributed throughout the genome in both forward and reverse orientations. However, full-length widely spaced Alu pairs having two Alus in the same (direct) orientation are statistically more prevalent than Alu pairs having two Alus in the opposite (inverted) orientation. The cause of this phenomenon is unknown. It has been hypothesized that this imbalance is the consequence of anomalous inverted Alu pair interactions. One proposed mechanism suggests that inverted Alu pairs can ectopically interact, exposing both ends of each Alu element making up the pair to a potential double-strand break, or "hit". This hypothesized "two-hit" (two double-strand breaks) potential per Alu element was used to develop a model for comparing the relative instabilities of human genes. The model incorporates both 1) the two-hit double-strand break potential of Alu elements and 2) the probability of exon-damaging deletions extending from these double-strand breaks. This model was used to compare the relative instabilities of 50 deletion-prone cancer genes and 50 randomly selected genes from the human genome. The output of the Alu element-based genomic instability model developed here is shown to coincide with the observed instability of deletion-prone cancer genes. The 50 cancer genes are collectively estimated to be 58% more unstable than the randomly chosen genes using this model. Seven of the deletion-prone cancer genes, ATM, BRCA1, FANCA, FANCD2, MSH2, NCOR1 and PBRM1, were among the most unstable 10% of the 100 genes analyzed. This algorithm may lay the foundation for comparing genetic risks posed by structural variations that are unique to specific individuals, families and people groups.
Reducing Data Size Inequality during Finite Element Model Separation into Superelements
Directory of Open Access Journals (Sweden)
Yu. V. Berchun
2015-01-01
Full Text Available The work considers two methods of automatic separation of final element model into super-elements to decrease computing resource demand when solving the linearly - elastic problems of solid mechanics. The first method represents an algorithm to separate a final element grid into simply connected sub-regions according to the set specific number of nodes in the super-element. The second method is based on the generation of a super-element with the set specific data size of the coefficient matrix of the system of equations of the internal nodes balance, which are eliminated during super-element transformation. Both methods are based on the theory of graphs. The data size of a matrix of coefficients is assessed on the assumption that the further solution of a task will use Holetsky’s method. Before assessment of data size, a KatkhillaMackey's (Cuthill-McKee algorithm renumbers the internal nodes of a super-element both to decrease a profile width of the appropriate matrix of the system of equations of balance and to reduce the number of nonzero elements. Test examples show work results of abovementioned methods compared in terms of inequality of generated super-element separation according to the number of nodes and data size of the coefficient matrix of the system of equations of the internal nodes balance. It is shown that the offered approach provides smaller inequality of data size of super-element matrixes, with slightly increasing inequality by the number of tops.
International Nuclear Information System (INIS)
Aristovich, K Y; Khan, S H
2010-01-01
Realistic computer modelling of biological objects requires building of very accurate and realistic computer models based on geometric and material data, type, and accuracy of numerical analyses. This paper presents some of the automatic tools and algorithms that were used to build accurate and realistic 3D finite element (FE) model of whole-brain. These models were used to solve the forward problem in magnetic field tomography (MFT) based on Magnetoencephalography (MEG). The forward problem involves modelling and computation of magnetic fields produced by human brain during cognitive processing. The geometric parameters of the model were obtained from accurate Magnetic Resonance Imaging (MRI) data and the material properties - from those obtained from Diffusion Tensor MRI (DTMRI). The 3D FE models of the brain built using this approach has been shown to be very accurate in terms of both geometric and material properties. The model is stored on the computer in Computer-Aided Parametrical Design (CAD) format. This allows the model to be used in a wide a range of methods of analysis, such as finite element method (FEM), Boundary Element Method (BEM), Monte-Carlo Simulations, etc. The generic model building approach presented here could be used for accurate and realistic modelling of human brain and many other biological objects.
Energy Technology Data Exchange (ETDEWEB)
Dubois, Maitee [Institut national de la recherche scientifique - Eau, Terre et Environnement, Universite du Quebec, Quebec City, Quebec, G1K 9A9 (Canada); Hare, Landis [Institut national de la recherche scientifique - Eau, Terre et Environnement, Universite du Quebec, Quebec City, Quebec, G1K 9A9 (Canada)], E-mail: landis@ete.inrs.ca
2009-03-15
Subcellular selenium (Se) distributions in the oligochaete Tubifex tubifex and in the insect Chironomus riparius did not vary with Se exposure duration, which was consistent with the observations that the duration of prey Se exposure had little influence on either Se assimilation or loss by a predatory insect (the alderfly Sialis velata). However, these two prey types differed in how Se was distributed in their cells. Overall, the predator assimilated a mean of 66% of the Se present in its prey, which was similar to the mean percentage of Se in prey cells (62%) that was theoretically available for uptake (that is, Se in the protein and organelle fractions). Likewise, data for cadmium, nickel and thallium suggest that predictions of trace element transfer between prey and predator are facilitated by considering the subcellular partitioning of these contaminants in prey cells. - Selenium assimilation by a predatory aquatic insect depends on Se availability in the cells of its prey.
International Nuclear Information System (INIS)
Dubois, Maitee; Hare, Landis
2009-01-01
Subcellular selenium (Se) distributions in the oligochaete Tubifex tubifex and in the insect Chironomus riparius did not vary with Se exposure duration, which was consistent with the observations that the duration of prey Se exposure had little influence on either Se assimilation or loss by a predatory insect (the alderfly Sialis velata). However, these two prey types differed in how Se was distributed in their cells. Overall, the predator assimilated a mean of 66% of the Se present in its prey, which was similar to the mean percentage of Se in prey cells (62%) that was theoretically available for uptake (that is, Se in the protein and organelle fractions). Likewise, data for cadmium, nickel and thallium suggest that predictions of trace element transfer between prey and predator are facilitated by considering the subcellular partitioning of these contaminants in prey cells. - Selenium assimilation by a predatory aquatic insect depends on Se availability in the cells of its prey
Development and validation of a weight-bearing finite element model for total knee replacement.
Woiczinski, M; Steinbrück, A; Weber, P; Müller, P E; Jansson, V; Schröder, Ch
2016-01-01
Total knee arthroplasty (TKA) is a successful procedure for osteoarthritis. However, some patients (19%) do have pain after surgery. A finite element model was developed based on boundary conditions of a knee rig. A 3D-model of an anatomical full leg was generated from magnetic resonance image data and a total knee prosthesis was implanted without patella resurfacing. In the finite element model, a restarting procedure was programmed in order to hold the ground reaction force constant with an adapted quadriceps muscle force during a squat from 20° to 105° of flexion. Knee rig experimental data were used to validate the numerical model in the patellofemoral and femorotibial joint. Furthermore, sensitivity analyses of Young's modulus of the patella cartilage, posterior cruciate ligament (PCL) stiffness, and patella tendon origin were performed. Pearson's correlations for retropatellar contact area, pressure, patella flexion, and femorotibial ap-movement were near to 1. Lowest root mean square error for retropatellar pressure, patella flexion, and femorotibial ap-movement were found for the baseline model setup with Young's modulus of 5 MPa for patella cartilage, a downscaled PCL stiffness of 25% compared to the literature given value and an anatomical origin of the patella tendon. The results of the conducted finite element model are comparable with the experimental results. Therefore, the finite element model developed in this study can be used for further clinical investigations and will help to better understand the clinical aspects after TKA with an unresurfaced patella.
Transport and dispersion of pollutants in surface impoundments: a finite element model
International Nuclear Information System (INIS)
Yeh, G.T.
1980-07-01
A surface impoundment model in finite element (SIMFE) is presented to enable the simulation of flow circulations and pollutant transport and dispersion in natural or artificial lakes, reservoirs or ponds with any number of islands. This surface impoundment model consists of two sub-models: hydrodynamic and pollutant transport models. Both submodels are simulated by the finite element method. While the hydrodynamic model is solved by the standard Galerkin finite element scheme, the pollutant transport model can be solved by any of the twelve optional finite element schemes built in the program. Theoretical approximations and the numerical algorithm of SIMFE are described. Detail instruction of the application are given and listing of FORTRAN IV source program are provided. Two sample problems are given. One is for an idealized system with a known solution to show the accuracy and partial validation of the models. The other is applied to Prairie Island for a set of hypothetical input data, typifying a class of problems to which SIMFE may be applied
Transport and dispersion of pollutants in surface impoundments: a finite element model
Energy Technology Data Exchange (ETDEWEB)
Yeh, G.T.
1980-07-01
A surface impoundment model in finite element (SIMFE) is presented to enable the simulation of flow circulations and pollutant transport and dispersion in natural or artificial lakes, reservoirs or ponds with any number of islands. This surface impoundment model consists of two sub-models: hydrodynamic and pollutant transport models. Both submodels are simulated by the finite element method. While the hydrodynamic model is solved by the standard Galerkin finite element scheme, the pollutant transport model can be solved by any of the twelve optional finite element schemes built in the program. Theoretical approximations and the numerical algorithm of SIMFE are described. Detail instruction of the application are given and listing of FORTRAN IV source program are provided. Two sample problems are given. One is for an idealized system with a known solution to show the accuracy and partial validation of the models. The other is applied to Prairie Island for a set of hypothetical input data, typifying a class of problems to which SIMFE may be applied.
Validation Assessment of a Glass-to-Metal Seal Finite-Element Model
Energy Technology Data Exchange (ETDEWEB)
Jamison, Ryan Dale [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Buchheit, Thomas E. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Emery, John M [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Romero, Vicente J. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Stavig, Mark E. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Newton, Clay S. [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Brown, Arthur [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States)
2017-10-01
Sealing glasses are ubiquitous in high pressure and temperature engineering applications, such as hermetic feed-through electrical connectors. A common connector technology are glass-to-metal seals where a metal shell compresses a sealing glass to create a hermetic seal. Though finite-element analysis has been used to understand and design glass-to-metal seals for many years, there has been little validation of these models. An indentation technique was employed to measure the residual stress on the surface of a simple glass-to-metal seal. Recently developed rate- dependent material models of both Schott 8061 and 304L VAR stainless steel have been applied to a finite-element model of the simple glass-to-metal seal. Model predictions of residual stress based on the evolution of material models are shown. These model predictions are compared to measured data. Validity of the finite- element predictions is discussed. It will be shown that the finite-element model of the glass-to-metal seal accurately predicts the mean residual stress in the glass near the glass-to-metal interface and is valid for this quantity of interest.
Lau, Stephan; Güllmar, Daniel; Flemming, Lars; Grayden, David B.; Cook, Mark J.; Wolters, Carsten H.; Haueisen, Jens
2016-01-01
Magnetoencephalography (MEG) signals are influenced by skull defects. However, there is a lack of evidence of this influence during source reconstruction. Our objectives are to characterize errors in source reconstruction from MEG signals due to ignoring skull defects and to assess the ability of an exact finite element head model to eliminate such errors. A detailed finite element model of the head of a rabbit used in a physical experiment was constructed from magnetic resonance and co-registered computer tomography imaging that differentiated nine tissue types. Sources of the MEG measurements above intact skull and above skull defects respectively were reconstructed using a finite element model with the intact skull and one incorporating the skull defects. The forward simulation of the MEG signals reproduced the experimentally observed characteristic magnitude and topography changes due to skull defects. Sources reconstructed from measured MEG signals above intact skull matched the known physical locations and orientations. Ignoring skull defects in the head model during reconstruction displaced sources under a skull defect away from that defect. Sources next to a defect were reoriented. When skull defects, with their physical conductivity, were incorporated in the head model, the location and orientation errors were mostly eliminated. The conductivity of the skull defect material non-uniformly modulated the influence on MEG signals. We propose concrete guidelines for taking into account conducting skull defects during MEG coil placement and modeling. Exact finite element head models can improve localization of brain function, specifically after surgery. PMID:27092044
Comparisons between a high resolution discrete element model and analogue model
LI, C. S.; Yin, H.; WU, C.; Zhang, J.
2017-12-01
A two-dimensional discrete element model (DEM) with high resolution is constructed to simulate the evolution of thrust wedge and an analogue model (AM) experiment is constructed to compare with the DEM results. This efficient parallel DEM program is written in the C language, and it is useful to solve the complex geological problems. More detailed about fold and thrust belts of DEM can be identified with the help of strain field. With non-rotating and non-tensile assumption, dynamic evolution of DEM is highly consistent with AM. Simulations in different scale can compare with each other by conversion formulas in DEM. Our results show that: (1) The overall evolution of DEM and AM is broadly similar. (2) Shortening is accommodated by in-sequence forward propagation of thrusts. The surface slope of the thrust wedge is within the stable field predicted by critical taper theory. (3) Details of thrust spacing, dip angle and number of thrusts vary between DEM and AM for the shortening experiment, but the characteristics of thrusts are similar on the whole. (4) Dip angles of the forward thrusts increased from foreland (ca. 30°) to the mobile wall (ca. 80°) (5) With shortening, both models had not the obvious volume loss. Instead, the volume basic remained unchanged in the whole extrusion processes. (6) Almost all high strain values are within fold-and-thrust belts in DEM, which allows a direct comparison between the fault zone identified on the DEM deformation field and that in the strain field. (7) The first fault initiates at deep depths and propagate down toward the surface. For the maximal volumetric strain focused on the décollement near the mobile wall, strengthening the material and making it for brittle. (8) With non-tensile particles for DEM, contraction is broadly distributed throughout the model and dilation is hardly any, which also leads to a higher efficient computation. (9) High resolution DEM can to first order successfully reproduce structures observed
ALG-2 oscillates in subcellular localization, unitemporally with calcium oscillations
DEFF Research Database (Denmark)
la Cour, Jonas Marstrand; Mollerup, Jens; Berchtold, Martin Werner
2007-01-01
discovered that the subcellular distribution of a tagged version of ALG-2 could be directed by physiological external stimuli (including ATP, EGF, prostaglandin, histamine), which provoke intracellular Ca2+ oscillations. Cellular stimulation led to a redistribution of ALG-2 from the cytosol to a punctate...
Predicting Subcellular Localization of Proteins by Bioinformatic Algorithms
DEFF Research Database (Denmark)
Nielsen, Henrik
2015-01-01
was used. Various statistical and machine learning algorithms are used with all three approaches, and various measures and standards are employed when reporting the performances of the developed methods. This chapter presents a number of available methods for prediction of sorting signals and subcellular...
Tip chip : Subcellular sampling from single cancer cells
Quist, Jos; Sarajlic, Edin; Lai, Stanley C.S.; Lemay, Serge G.
2016-01-01
To analyze the molecular content of single cells, cell lysis is typically required, yielding a snapshot of cell behavior only. To follow complex molecular profiles over time, subcellular sampling methods potentially can be used, but to date these methods involve laborious offline analysis. Here we
An Eulerian-Lagrangian finite-element method for modeling crack growth in creeping materials
International Nuclear Information System (INIS)
Lee Hae Sung.
1991-01-01
This study is concerned with the development of finite-element-solution methods for analysis of quasi-static, ductile crack growth in history-dependent materials. The mixed Eulerian-Langrangian description (ELD) kinematic model is shown to have several desirable properties for modeling inelastic crack growth. Accordingly, a variational statement based on the ELD for history-dependent materials is developed, and a new moving-grid finite-element method based on the variational statement is presented. The moving-grid finite-element method based on the variational statement is presented. The moving-grid finite-element method is applied to the analysis of transient, quasi-static, mode-III crack growth in creeping materials. A generalized Petrov-Galerkin method (GPG) is developed that simultaneously stabilizes the statement to admit L 2 basis functions for the nonlinear strain field. Quasi-static, model-III crack growth in creeping materials under small-scale-yielding (SSY) conditions is considered. The GPG/ELD moving-grid finite-element formulation is used to model a transient crack-growth problem. The GPG/ELD results compare favorably with previously-published numerical results and the asymptotic solutions
The ACR-program for automatic finite element model generation for part through cracks
International Nuclear Information System (INIS)
Leinonen, M.S.; Mikkola, T.P.J.
1989-01-01
The ACR-program (Automatic Finite Element Model Generation for Part Through Cracks) has been developed at the Technical Research Centre of Finland (VTT) for automatic finite element model generation for surface flaws using three dimensional solid elements. Circumferential or axial cracks can be generated on the inner or outer surface of a cylindrical or toroidal geometry. Several crack forms are available including the standard semi-elliptical surface crack. The program can be used in the development of automated systems for fracture mechanical analyses of structures. The tests for the accuracy of the FE-mesh have been started with two-dimensional models. The results indicate that the accuracy of the standard mesh is sufficient for practical analyses. Refinement of the standard mesh is needed in analyses with high load levels well over the limit load of the structure
Model study of acid rain effect on adsorption of trace elements on soils using a multitracer
International Nuclear Information System (INIS)
Wang, H.F.; Ambe, S.; Takematsu, N.; Ambe, F.
1998-01-01
Using a radioactive multitracer and model acid rain (HCl or H 2 SO 4 solution), batch experiments were performed to examine the pH effect on the adsorption-desorption equilibrium of 16 elements on soils as a model study of an acid rain effect. Kaolin, black soil (original and with organic matter almost removed) and Kureha soil (original and with organic matter almost removed) were used as adsorbents. Characteristic dependence on the pH value of the suspension was observed for the adsorption of the elements on kaolin and the soils. The results of this model study indicate that acid rain decreases the retention of cations, while it increases or does not change the adsorption of anions on soils. Organic matter in soils has a positive effect on the extent of adsorption of most elements investigated. (author)
A three-dimensional spectral element model for the solution of the hydrostatic primitive equations
Iskandarani, M; Levin, J C
2003-01-01
We present a spectral element model to solve the hydrostatic primitive equations governing large-scale geophysical flows. The highlights of this new model include unstructured grids, dual h-p paths to convergence, and good scalability characteristics on present day parallel computers including Beowulf-class systems. The behavior of the model is assessed on three process-oriented test problems involving wave propagation, gravitational adjustment, and nonlinear flow rectification, respectively. The first of these test problems is a study of the convergence properties of the model when simulating the linear propagation of baroclinic Kelvin waves. The second is an intercomparison of spectral element and finite-difference model solutions to the adjustment of a density front in a straight channel. Finally, the third problem considers the comparison of model results to measurements obtained from a laboratory simulation of flow around a submarine canyon. The aforementioned tests demonstrate the good performance of th...
An elemental model of retrospective revaluation without within-compound associations.
Connor, Patrick C; Lolordo, Vincent M; Trappenberg, Thomas P
2014-03-01
When retrospective revaluation phenomena (e.g., unovershadowing: AB+, then A-, then test B) were discovered, simple elemental models were at a disadvantage because they could not explain such phenomena. Extensions of these models and novel models appealed to within-compound associations to accommodate these new data. Here, we present an elemental, neural network model of conditioning that explains retrospective revaluation apart from within-compound associations. In the model, previously paired stimuli (say, A and B, after AB+) come to activate similar ensembles of neurons, so that revaluation of one stimulus (A-) has the opposite effect on the other stimulus (B) through changes (decreases) in the strength of the inhibitory connections between neurons activated by B. The ventral striatum is discussed as a possible home for the structure and function of the present model.
Directory of Open Access Journals (Sweden)
Lewis Victoria
2012-04-01
Full Text Available Abstract Background Prion disease transmission and pathogenesis are linked to misfolded, typically protease resistant (PrPres conformers of the normal cellular prion protein (PrPC, with the former posited to be the principal constituent of the infectious 'prion'. Unexplained discrepancies observed between detectable PrPres and infectivity levels exemplify the complexity in deciphering the exact biophysical nature of prions and those host cell factors, if any, which contribute to transmission efficiency. In order to improve our understanding of these important issues, this study utilized a bioassay validated cell culture model of prion infection to investigate discordance between PrPres levels and infectivity titres at a subcellular resolution. Findings Subcellular fractions enriched in lipid rafts or endoplasmic reticulum/mitochondrial marker proteins were equally highly efficient at prion transmission, despite lipid raft fractions containing up to eight times the levels of detectable PrPres. Brain homogenate infectivity was not differentially enhanced by subcellular fraction-specific co-factors, and proteinase K pre-treatment of selected fractions modestly, but equally reduced infectivity. Only lipid raft associated infectivity was enhanced by sonication. Conclusions This study authenticates a subcellular disparity in PrPres and infectivity levels, and eliminates simultaneous divergence of prion strains as the explanation for this phenomenon. On balance, the results align best with the concept that transmission efficiency is influenced more by intrinsic characteristics of the infectious prion, rather than cellular microenvironment conditions or absolute PrPres levels.
Dispersion analysis of the Pn -Pn-1DG mixed finite element pair for atmospheric modelling
Melvin, Thomas
2018-02-01
Mixed finite element methods provide a generalisation of staggered grid finite difference methods with a framework to extend the method to high orders. The ability to generate a high order method is appealing for applications on the kind of quasi-uniform grids that are popular for atmospheric modelling, so that the method retains an acceptable level of accuracy even around special points in the grid. The dispersion properties of such schemes are important to study as they provide insight into the numerical adjustment to imbalance that is an important component in atmospheric modelling. This paper extends the recent analysis of the P2 - P1DG pair, that is a quadratic continuous and linear discontinuous finite element pair, to higher polynomial orders and also spectral element type pairs. In common with the previously studied element pair, and also with other schemes such as the spectral element and discontinuous Galerkin methods, increasing the polynomial order is found to provide a more accurate dispersion relation for the well resolved part of the spectrum but at the cost of a number of unphysical spectral gaps. The effects of these spectral gaps are investigated and shown to have a varying impact depending upon the width of the gap. Finally, the tensor product nature of the finite element spaces is exploited to extend the dispersion analysis into two-dimensions.
Heat transfer and pressure drop of a reactor fuel element model with polyzonal spiral finning
Energy Technology Data Exchange (ETDEWEB)
Oka, S; Becirspahic, S [Institute of Nuclear Sciences Boris Kidric, Heat Transfer Department, Vinca, Beograd (Serbia and Montenegro)
1964-10-15
Heat transfer and pressure drop of a reactor fuel element model with polyzonal spiral finning have been investigated. The St-number distribution over length and perimeter of he finning are given. The mean and minimum St{sub k}-number are plotted against the Re-number. The influence of the gap between two fuel elements upon heat transfer and pressure drop, in dependence on the Re-number, and the influence of the length of the fuel element on pressure drop across the gap are shown. The influence of the relative position of the splitters of two neighboring fuel elements on pressure drop and heat transfer is shown. The investigations were performed in the Re-number range 15,000 to 100,000 (author)
The association of LUR modeled PM2.5 elemental composition with personal exposure
International Nuclear Information System (INIS)
Montagne, Denise; Hoek, Gerard; Nieuwenhuijsen, Mark; Lanki, Timo; Pennanen, Arto; Portella, Meritxell; Meliefste, Kees; Wang, Meng; Eeftens, Marloes; Yli-Tuomi, Tarja; Cirach, Marta; Brunekreef, Bert
2014-01-01
Background and aims: Land use regression (LUR) models predict spatial variation of ambient concentrations, but little is known about the validity in predicting personal exposures. In this study, the association of LUR modeled concentrations of PM 2.5 components with measured personal concentrations was determined. The elements of interest were copper (Cu), iron (Fe), potassium (K), nickel (Ni), sulfur (S), silicon (Si), vanadium (V) and zinc (Zn). Methods: In Helsinki (Finland), Utrecht (the Netherlands) and Barcelona (Spain) five participants from urban background, five from suburban background and five from busy street sites were selected in each city (15 participants per city). Outdoor, indoor and personal 96-hour PM 2.5 samples were collected by the participants over periods of two weeks in three different seasons (winter, summer and spring/autumn) and the overall average was calculated. Elemental composition was measured by ED-XRF spectrometry. The LUR models for the average ambient concentrations of each element were developed by the ESCAPE project. Results: LUR models predicted the within-city variation of average outdoor Cu and Fe concentrations moderately well (range in R 2 27–67% for Cu and 24–54% for Fe). The outdoor concentrations of the other elements were not well predicted. The LUR modeled concentration only significantly correlated with measured personal Fe exposure in Utrecht and Ni and V in Helsinki. The LUR model predictions did not correlate with measured personal Cu exposure. After excluding observations with an indoor/outdoor ratio of > 1.5, modeled Cu outdoor concentrations correlated with indoor concentrations in Helsinki and Utrecht and personal concentrations in Utrecht. The LUR model predictions were associated with measured outdoor, indoor and personal concentrations for all elements when the data for the three cities was pooled. Conclusions: Within-city modeled variation of elemental composition of PM 2.5 did not predict measured
International Nuclear Information System (INIS)
Wang Zhengzhi; Xu Yun; Gu Ping
2012-01-01
A polypropylene nanofibrillar array was successfully fabricated by template-assisted nanofabrication strategy. Adhesion properties of this gecko-inspired structure were studied through two parallel and independent approaches: experiments and finite element simulations. Experimental results show relatively good normal adhesion, but accompanied by high preloads. The interfacial adhesion was modelled by effective spring elements with piecewise-linear constitution. The effective elasticity of the fibre-array system was originally calculated from our measured elasticity of single nanowire. Comparisons of the experimental and simulative results reveal quantitative agreement except for some explainable deviations, which suggests the potential applicability of the present models and applied theories. (fast track communication)
MESH-TO-BIM: FROM SEGMENTED MESH ELEMENTS TO BIM MODEL WITH LIMITED PARAMETERS
Directory of Open Access Journals (Sweden)
X. Yang
2018-05-01
Full Text Available Building Information Modelling (BIM technique has been widely utilized in heritage documentation and comes to a general term Historical/Heritage BIM (HBIM. The current HBIM project mostly employs the scan-to-BIM process to manually create the geometric model from the point cloud. This paper explains how it is possible to shape from the mesh geometry with reduced human involvement during the modelling process. Aiming at unbuilt heritage, two case studies are handled in this study, including a ruined Roman stone architectural and a severely damaged abbey. The pipeline consists of solid element modelling based on documentation data using Autodesk Revit, a common BIM platform, and the successive modelling from these geometric primitives using Autodesk Dynamo, a visual programming built-in plugin tool in Revit. The BIM-based reconstruction enriches the classic visual model from computer graphics approaches with measurement, semantic and additional information. Dynamo is used to develop a semi-automated function to reduce the manual process, which builds the final BIM model from segmented parametric elements directly. The level of detail (LoD of the final models is dramatically relevant with the manual involvement in the element creation. The proposed outline also presents two potential issues in the ongoing work: combining the ontology semantics with the parametric BIM model, and introducing the proposed pipeline into the as-built HBIM process.
Finite element modeling of nonlinear piezoelectric energy harvesters with magnetic interaction
International Nuclear Information System (INIS)
Upadrashta, Deepesh; Yang, Yaowen
2015-01-01
Piezoelectric energy harvesting from ambient vibrations is a potential technology for powering wireless sensors and low power electronic devices. The conventional linear harvesters suffer from narrow operational bandwidth. Many attempts have been made especially using the magnetic interaction to broaden the bandwidth of harvesters. The finite element (FE) modeling has been used only for analyzing the linear harvesters in the literature. The main difficulties in extending the FE modeling to analyze the nonlinear harvesters involving magnetic interaction are developing the mesh needed for magnetic interaction in dynamic problems and the high demand on computational resource needed for solving the coupled electrical–mechanical–magnetic problem. In this paper, an innovative method is proposed to model the magnetic interaction without inclusion of the magnetic module. The magnetic force is modeled using the nonlinear spring element available in ANSYS finite element analysis (FEA) package, thus simplifying the simulation of nonlinear piezoelectric energy harvesters as an electromechanically coupled problem. Firstly, an FE model of a monostable nonlinear harvester with cantilever configuration is developed and the results are validated with predictions from the theoretical model. Later, the proposed technique of FE modeling is extended to a complex 2-degree of freedom nonlinear energy harvester for which an accurate analytical model is difficult to derive. The performance predictions from FEA are compared with the experimental results. It is concluded that the proposed modeling technique is able to accurately analyze the behavior of nonlinear harvesters with magnetic interaction. (paper)
Ochoa-Avendaño, J.; Garzon-Alvarado, D. A.; Linero, Dorian L.; Cerrolaza, M.
2017-01-01
This paper presents the formulation, implementation, and validation of a simplified qualitative model to determine the crack path of solids considering static loads, infinitesimal strain, and plane stress condition. This model is based on finite element method with a special meshing technique, where nonlinear link elements are included between the faces of the linear triangular elements. The stiffness loss of some link elements represents the crack opening. Three experimental tests of bending...
International Nuclear Information System (INIS)
Verfondern, K.; Mueller, D.
1991-01-01
Computer codes for modelling the fission product release behavior of spherical fuel elements for High Temperature Reactors (HTR) have been developed for the purpose of being used in risk analyses for HTRs. An important part of the validation and verification procedure for these calculation models is the theoretical investigation of accident simulation experiments which have been conducted in the KueFA test facility in the Hot Cells at KFA. The paper gives a presentation of the basic modeling and the calculational results of fission product release from modern German HTR fuel elements in the temperature range 1600-1800 deg. C using the TRISO coated particle failure model PANAMA and the diffusion model FRESCO. Measurements of the transient release behavior for cesium and strontium and of their concentration profiles after heating have provided informations about diffusion data in the important retention barriers of the fuel: silicon carbide and matrix graphite. It could be shown that the diffusion coefficients of both cesium and strontium in silicon carbide can significantly be reduced using a factor in the range of 0.02 - 0.15 compared to older HTR fuel. Also in the development of fuel element graphite, a tendency towards lower diffusion coefficients for both nuclides can be derived. Special heating tests focussing on the fission gases and iodine release from the matrix contamination have been evaluated to derive corresponding effective diffusion data for iodine in fuel element graphite which are more realistic than the iodine transport data used so far. Finally, a prediction of krypton and cesium release from spherical fuel elements under heating conditions will be given for fuel elements which at present are irradiated in the FRJ2, Juelich, and which are intended to be heated at 1600/1800 deg. C in the KueFA furnace in near future. (author). 7 refs, 11 figs
Computer modelling of water reactor fuel element performance and life time
International Nuclear Information System (INIS)
Bibilashvili, Yu.K.; Golovnin, I.S.; Elesin, V.F.
1983-01-01
Well calibrated models and methods of calculation permit the confident prediction of fuel element behaviour under most different operational conditions; based on the prediction of this kind one can improve designs and fuel element behaviour. Therefore, in the Soviet Union in the development of reactor cores for NPP one of the leading parts is given to design problems associated with computer modelling of fuel element performance and reliability. Special attention is paid to methods of calculation that permit the prediction of fuel element behaviour under conditions which either make experimental studies very complicated (practically impossible) or require laborious and expensive in-pile tests. Primarily it concerns accidents of different types, off-normal conditions, transients, fuel element behaviour at high burn-up, when an accumulation of a great amount of fission fragments is accompanied by changes in physical and mechanical properties as induced by irradiation damage, mechanical fatigue, physical and chemical reactions with a coolant, fission products etc. Some major computer modelling programs for the prediction of water reactor fuel behaviour are briefly described below and tendencies in the further development of work in this area are summarized
Subcellular distribution and chemical forms of cadmium in Phytolacca americana L
Energy Technology Data Exchange (ETDEWEB)
Fu Xiaoping; Dou Changming [Ministry of Agriculture Key Laboratory of Non-point Source Pollution Control, Institute of Environmental Science and Technology, Zhejiang University, Hangzhou 310029 (China); Chen Yingxu, E-mail: yingxu_chen@hotmail.com [Ministry of Agriculture Key Laboratory of Non-point Source Pollution Control, Institute of Environmental Science and Technology, Zhejiang University, Hangzhou 310029 (China); Chen Xincai; Shi Jiyan; Yu Mingge; Xu Jie [Ministry of Agriculture Key Laboratory of Non-point Source Pollution Control, Institute of Environmental Science and Technology, Zhejiang University, Hangzhou 310029 (China)
2011-02-15
Phytolacca americana L. (pokeweed) is a promising species for Cd phytoextraction with large biomass and fast growth rate. To further understand the mechanisms involved in Cd tolerance and detoxification, the present study investigated subcellular distribution and chemical forms of Cd in pokeweed. Subcellular fractionation of Cd-containing tissues indicated that both in root and leaves, the majority of the element was located in soluble fraction and cell walls. Meanwhile, Cd taken up by pokeweed existed in different chemical forms. Results showed that the greatest amount of Cd was found in the extraction of 80% ethanol in roots, followed by 1 M NaCl, d-H{sub 2}O and 2% HAc, while in leaves and stems, most of the Cd was extracted by 1 M NaCl, and the subdominant amount of Cd was extracted by 80% ethanol. It could be suggested that Cd compartmentation with organo-ligands in vacuole or integrated with pectates and proteins in cell wall might be responsible for the adaptation of pokeweed to Cd stress.
Comolli, L R; Kundmann, M; Downing, K H
2006-07-01
We illustrate the combined use of cryo-electron tomography and spectroscopic difference imaging in the study of subcellular structure and subcellular bodies in whole bacteria. We limited our goal and focus to bodies with a distinct elemental composition that was in a sufficiently high concentration to provide the necessary signal-to-noise level at the relatively large sample thicknesses of the intact cell. This combination proved very powerful, as demonstrated by the identification of a phosphorus-rich body in Caulobacter crescentus. We also confirmed the presence of a body rich in carbon, demonstrated that these two types of bodies are readily recognized and distinguished from each other, and provided, for the first time to our knowledge, structural information about them in their intact state. In addition, we also showed the presence of a similar type of phosphorus-rich body in Deinococcus grandis, a member of a completely unrelated bacteria genus. Cryo-electron microscopy and tomography allowed the study of the biogenesis and morphology of these bodies at resolutions better than 10 nm, whereas spectroscopic difference imaging provided a direct identification of their chemical composition.
Righter, K.; Danielson, L.; Pando, K.; Shofner, G.; Lee, C. -T.
2013-01-01
Siderophile elements have been used to constrain conditions of core formation and differentiation for the Earth, Mars and other differentiated bodies [1]. Recent models for the Earth have concluded that the mantle and core did not fully equilibrate and the siderophile element contents of the mantle can only be explained under conditions where the oxygen fugacity changes from low to high during accretion and the mantle and core do not fully equilibrate [2,3]. However these conclusions go against several physical and chemical constraints. First, calculations suggest that even with the composition of accreting material changing from reduced to oxidized over time, the fO2 defined by metal-silicate equilibrium does not change substantially, only by approximately 1 logfO2 unit [4]. An increase of more than 2 logfO2 units in mantle oxidation are required in models of [2,3]. Secondly, calculations also show that metallic impacting material will become deformed and sheared during accretion to a large body, such that it becomes emulsified to a fine scale that allows equilibrium at nearly all conditions except for possibly the length scale for giant impacts [5] (contrary to conclusions of [6]). Using new data for D(Mo) metal/silicate at high pressures, together with updated partitioning expressions for many other elements, we will show that metal-silicate equilibrium across a long span of Earth s accretion history may explain the concentrations of many siderophile elements in Earth's mantle. The modeling includes refractory elements Ni, Co, Mo, and W, as well as highly siderophile elements Au, Pd and Pt, and volatile elements Cd, In, Bi, Sb, Ge and As.
Lateral strength force of URM structures based on a constitutive model for interface element
Directory of Open Access Journals (Sweden)
A.H. Akhaveissy
Full Text Available This paper presents the numerical implementation of a new proposed interface model for modeling the behavior of mortar joints in masonry walls. Its theoretical framework is fully based on the plasticity theory. The Von Mises criterion is used to simulate the behavior of brick and stone units. The interface laws for contact elements are formulated to simulate the softening behavior of mortar joints under tensile stress; a normal linear cap model is also used to limit compressive stress. The numerical predictions based on the proposed model for the behavior of interface elements correlate very highly with test data. A new explicit formula based on results of proposed interface model is also presented to estimate the strength of unreinforced masonry structures. The closed form solution predicts the ultimate lateral load of unreinforced masonry walls less error percentage than ATC and FEMA-307. Consequently, the proposed closed form solution can be used satisfactorily to analyze unreinforced masonry structures.
Naghibi Beidokhti, Hamid; Janssen, Dennis; van de Groes, Sebastiaan; Hazrati, Javad; Van den Boogaard, Ton; Verdonschot, Nico
2017-12-08
In finite element (FE) models knee ligaments can represented either by a group of one-dimensional springs, or by three-dimensional continuum elements based on segmentations. Continuum models closer approximate the anatomy, and facilitate ligament wrapping, while spring models are computationally less expensive. The mechanical properties of ligaments can be based on literature, or adjusted specifically for the subject. In the current study we investigated the effect of ligament modelling strategy on the predictive capability of FE models of the human knee joint. The effect of literature-based versus specimen-specific optimized material parameters was evaluated. Experiments were performed on three human cadaver knees, which were modelled in FE models with ligaments represented either using springs, or using continuum representations. In spring representation collateral ligaments were each modelled with three and cruciate ligaments with two single-element bundles. Stiffness parameters and pre-strains were optimized based on laxity tests for both approaches. Validation experiments were conducted to evaluate the outcomes of the FE models. Models (both spring and continuum) with subject-specific properties improved the predicted kinematics and contact outcome parameters. Models incorporating literature-based parameters, and particularly the spring models (with the representations implemented in this study), led to relatively high errors in kinematics and contact pressures. Using a continuum modelling approach resulted in more accurate contact outcome variables than the spring representation with two (cruciate ligaments) and three (collateral ligaments) single-element-bundle representations. However, when the prediction of joint kinematics is of main interest, spring ligament models provide a faster option with acceptable outcome. Copyright © 2017 Elsevier Ltd. All rights reserved.
Metschan, Stephen L.; Wilden, Kurtis S.; Sharpless, Garrett C.; Andelman, Rich M.
1993-01-01
Textile manufacturing processes offer potential cost and weight advantages over traditional composite materials and processes for transport fuselage elements. In the current study, design cost modeling relationships between textile processes and element design details were developed. Such relationships are expected to help future aircraft designers to make timely decisions on the effect of design details and overall configurations on textile fabrication costs. The fundamental advantage of a design cost model is to insure that the element design is cost effective for the intended process. Trade studies on the effects of processing parameters also help to optimize the manufacturing steps for a particular structural element. Two methods of analyzing design detail/process cost relationships developed for the design cost model were pursued in the current study. The first makes use of existing databases and alternative cost modeling methods (e.g. detailed estimating). The second compares design cost model predictions with data collected during the fabrication of seven foot circumferential frames for ATCAS crown test panels. The process used in this case involves 2D dry braiding and resin transfer molding of curved 'J' cross section frame members having design details characteristic of the baseline ATCAS crown design.
Reliability modelling and analysis of a multi-state element based on a dynamic Bayesian network
Li, Zhiqiang; Xu, Tingxue; Gu, Junyuan; Dong, Qi; Fu, Linyu
2018-04-01
This paper presents a quantitative reliability modelling and analysis method for multi-state elements based on a combination of the Markov process and a dynamic Bayesian network (DBN), taking perfect repair, imperfect repair and condition-based maintenance (CBM) into consideration. The Markov models of elements without repair and under CBM are established, and an absorbing set is introduced to determine the reliability of the repairable element. According to the state-transition relations between the states determined by the Markov process, a DBN model is built. In addition, its parameters for series and parallel systems, namely, conditional probability tables, can be calculated by referring to the conditional degradation probabilities. Finally, the power of a control unit in a failure model is used as an example. A dynamic fault tree (DFT) is translated into a Bayesian network model, and subsequently extended to a DBN. The results show the state probabilities of an element and the system without repair, with perfect and imperfect repair, and under CBM, with an absorbing set plotted by differential equations and verified. Through referring forward, the reliability value of the control unit is determined in different kinds of modes. Finally, weak nodes are noted in the control unit.
Modeling fragmentation with new high order finite element technology and node splitting
Directory of Open Access Journals (Sweden)
Olovsson Lars
2015-01-01
Full Text Available The modeling of fragmentation has historically been linked to the weapons industry where the main goal is to optimize a bomb or to design effective blast shields. Numerical modeling of fragmentation from dynamic loading has traditionally been modeled by legacy finite element solvers that rely on element erosion to model material failure. However this method results in the removal of too much material. This is not realistic as retaining the mass of the structure is critical to modeling the event correctly. We propose a new approach implemented in the IMPETUS AFEA SOLVER® based on the following: New High Order Finite Elements that can easily deal with very large deformations; Stochastic distribution of initial damage that allows for a non homogeneous distribution of fragments; and a Node Splitting Algorithm that allows for material fracture without element erosion that is mesh independent. The approach is evaluated for various materials and scenarios: -Titanium ring electromagnetic compression; Hard steel Taylor bar impact, Fused silica Taylor bar impact, Steel cylinder explosion, The results obtained from the simulations are representative of the failure mechanisms observed experimentally. The main benefit of this approach is good energy conservation (no loss of mass and numerical robustness even in complex situations.
Evaluation of the finite element software ABAQUS for biomechanical modelling of biphasic tissues.
Wu, J Z; Herzog, W; Epstein, M
1998-02-01
The biphasic cartilage model proposed by Mow et al. (1980) has proven successful to capture the essential mechanical features of articular cartilage. In order to analyse the joint contact mechanics in real, anatomical joints, the cartilage model needs to be implemented into a suitable finite element code to approximate the irregular surface geometries of such joints. However, systematic and extensive evaluation of the capacity of commercial software for modelling the contact mechanics with biphasic cartilage layers has not been made. This research was aimed at evaluating the commercial finite element software ABAQUS for analysing biphasic soft tissues. The solutions obtained using ABAQUS were compared with those obtained using other finite element models and analytical solutions for three numerical tests: an unconfined indentation test, a test with the contact of a spherical cartilage surface with a rigid plate, and an axi-symmetric joint contact test. It was concluded that the biphasic cartilage model can be implemented into the commercial finite element software ABAQUS to analyse practical joint contact problems with biphasic articular cartilage layers.
Finite Element Model for Nonlinear Analysis of Reinforced Concrete Beams and Plane Frames
Directory of Open Access Journals (Sweden)
R.S.B. STRAMANDINOLI
Full Text Available Abstract In this work, a two-dimensional finite element (FE model for physical and geometric nonlinear analysis of reinforced concrete beams and plane frames, developed by the authors, is presented. The FE model is based on the Euler-Bernoulli Beam Theory, in which shear deformations are neglected. The bar elements have three nodes with a total of seven degrees of freedom. Three Gauss-points are utilized for the element integration, with the element section discretized into layers at each Gauss point (Fiber Model. It is assumed that concrete and reinforcing bars are perfectly bonded, and each section layer is assumed to be under a uniaxial stress-state. Nonlinear constitutive laws are utilized for both concrete and reinforcing steel layers, and a refined tension-stiffening model, developed by the authors, is included. The Total Lagrangean Formulation is adopted for geometric nonlinear consideration and several methods can be utilized to achieve equilibrium convergence of the nonlinear equations. The developed model is implemented into a computer program named ANEST/CA, which is validated by comparison with some tests on RC beams and plane frames, showing an excellent correlation between numerical and experimental results.
ELASTO-KINEMATIC COMPUTATIONAL MODEL OF SUSPENSION WITH FLEXIBLE SUPPORTING ELEMENTS
Directory of Open Access Journals (Sweden)
Tomáš Vrána
2016-04-01
Full Text Available This paper analyzes the impact of flexibility of individual supporting elements of independent suspension on its elasto-kinematic characteristics. The toe and camber angle are the geometric parameters of the suspension, which waveforms and their changes under the action of vertical, longitudinal and transverse forces affect the stability of the vehicle. To study these dependencies, the computational multibody system (MBS model of axle suspension in the system HyperWorks is created. There are implemented Finite-Element-Method (FEM models reflecting the flexibility of the main supporting elements. These are subframe, the longitudinal arms, transverse arms and knuckle. Flexible models are developed using Component Mode Synthesis (CMS by Craig-Bampton. The model further comprises force elements, such as helical springs, shock absorbers with a stop of the wheel and the anti-roll bar. Rubber-metal bushings are modeled flexibly, using nonlinear deformation characteristics. Simulation results are validated by experimental measurements of geometric parameters of real suspension.
International Nuclear Information System (INIS)
Yeh, G.T.; Wong, K.V.; Craig, P.M.; Davis, E.C.
1985-01-01
This paper presents the construction, verification, and application of two groundwater flow and contaminant transport models: A Finite Element Model of Water Flow through Aquifers (FEWA) and A Finite Element Model of Material Transport through Aquifers (FEMA). The construction is based on the finite element approximation of partial differential equations of groundwater flow (FEWA) and of solute movement (FEMA). The particular features of FEWA and FEMA are their versatility and flexibility for dealing with nearly all vertically integrated two-dimensional problems. The models were verified against both analytical solutions and widely used US Geological Survey finite difference approximations. They were then applied for calibration and validation, using data obtained in experiments at the Engineering Test Facility at Oak Ridge National Laboratory. Results indicated that the models are valid for this specific site. To demonstrate the versatility anf flexibility of the models, they were applied to two hypothetical, but realistic, complex problems and three field sites across the United States. In these applications the models yielded good agreement with the field data for all three sites. Finally, the predictive capabilities of the models were demonstrated using data obtained at the Hialeah Preston site in Florida. This case illustrates the capability of FEWA and FEMA as predictive tools and their usefulness in the management of groundwater flow and contaminant transport. 25 refs
A discrete-element model for viscoelastic deformation and fracture of glacial ice
Riikilä, T. I.; Tallinen, T.; Åström, J.; Timonen, J.
2015-10-01
A discrete-element model was developed to study the behavior of viscoelastic materials that are allowed to fracture. Applicable to many materials, the main objective of this analysis was to develop a model specifically for ice dynamics. A realistic model of glacial ice must include elasticity, brittle fracture and slow viscous deformations. Here the model is described in detail and tested with several benchmark simulations. The model was used to simulate various ice-specific applications with resulting flow rates that were compatible with Glen's law, and produced under fragmentation fragment-size distributions that agreed with the known analytical and experimental results.
Zhan, Yijian; Meschke, Günther
2017-07-08
The effective analysis of the nonlinear behavior of cement-based engineering structures not only demands physically-reliable models, but also computationally-efficient algorithms. Based on a continuum interface element formulation that is suitable to capture complex cracking phenomena in concrete materials and structures, an adaptive mesh processing technique is proposed for computational simulations of plain and fiber-reinforced concrete structures to progressively disintegrate the initial finite element mesh and to add degenerated solid elements into the interfacial gaps. In comparison with the implementation where the entire mesh is processed prior to the computation, the proposed adaptive cracking model allows simulating the failure behavior of plain and fiber-reinforced concrete structures with remarkably reduced computational expense.
Energy Technology Data Exchange (ETDEWEB)
Rojas C, E. L.; Ferro F, G. [ININ, Carretera Mexico-Toluca s/n, Ocoyoacac 52750, Estado de Mexico (Mexico); Santos C, C. L., E-mail: leticia.rojas@inin.gob.m [Universidad Autonoma del Estado de Mexico, Paseo Tollocan esquina Paseo Colon s/n, Toluca 50120, Estado de Mexico (Mexico)
2010-10-15
The utility of radiolabeled peptides for the early and specific diagnosis of cancer is being investigated around the world. Recent investigations have demonstrated the specificity of {sup 99m}Tc-bombesin conjugates to target breast and prostate cancer cells. The novel idea of adding the Tat (49-57) peptide to the radiopharmaceutical in order to penetrate the cell nucleus is a new proposal for therapy at cellular level. {sup 99m}Tc radionuclide produces Auger energy of 0.9 keV/decay and internal conversion electron energy of 15.4 keV/decay, which represent 11.4% of the total {sup 99m}Tc energy released per decay. It is expected that the dose delivered at specific microscopic levels in cancer cells induce a therapeutic effect. The aim of this research was to assess in vitro internalization kinetics in breast and prostate cancer cells of {sup 99m}Tc-Tat(49-57)-bombesin and to evaluate the radiation absorbed dose at subcellular level simulating the electron transport. The pen main program from the 2006 version of the Penelope code was used to simulate and calculate the absorbed dose by Auger and internal conversion electron contribution in the membrane, cytoplasm and nucleus of Pc-3 prostate cancer and MCF7 and MDA human breast cancer cell lines. Nuclear data were obtained from the 2002 BNM-LNHB {sup 99m}Tc decay scheme. The spatial distribution of the absorbed doses to the membrane, cytoplasm and nucleus were calculated using a geometric model built from real images of cancer cells. The elemental cell composition was taken from the literature. The biokinetic data were obtained evaluating total disintegrations in each subcellular compartment by integration of the time-activity curves acquired from experimental data. Results showed that 61, 63 and 46% of total disintegrations per cell-bound {sup 99m}Tc-Tat-Bn activity unit occurred in the nucleus of Pc-3, MCF7 and MDA-MB231 respectively. {sup 99m}Tc--Tat-Bn absorbed doses were 1.78, 5.76 and 2.59 Gy/Bq in the nucleus of
Narsai, Reena; Devenish, James; Castleden, Ian; Narsai, Kabir; Xu, Lin; Shou, Huixia; Whelan, James
2013-12-01
Omics research in Oryza sativa (rice) relies on the use of multiple databases to obtain different types of information to define gene function. We present Rice DB, an Oryza information portal that is a functional genomics database, linking gene loci to comprehensive annotations, expression data and the subcellular location of encoded proteins. Rice DB has been designed to integrate the direct comparison of rice with Arabidopsis (Arabidopsis thaliana), based on orthology or 'expressology', thus using and combining available information from two pre-eminent plant models. To establish Rice DB, gene identifiers (more than 40 types) and annotations from a variety of sources were compiled, functional information based on large-scale and individual studies was manually collated, hundreds of microarrays were analysed to generate expression annotations, and the occurrences of potential functional regulatory motifs in promoter regions were calculated. A range of computational subcellular localization predictions were also run for all putative proteins encoded in the rice genome, and experimentally confirmed protein localizations have been collated, curated and linked to functional studies in rice. A single search box allows anything from gene identifiers (for rice and/or Arabidopsis), motif sequences, subcellular location, to keyword searches to be entered, with the capability of Boolean searches (such as AND/OR). To demonstrate the utility of Rice DB, several examples are presented including a rice mitochondrial proteome, which draws on a variety of sources for subcellular location data within Rice DB. Comparisons of subcellular location, functional annotations, as well as transcript expression in parallel with Arabidopsis reveals examples of conservation between rice and Arabidopsis, using Rice DB (http://ricedb.plantenergy.uwa.edu.au). © 2013 The Authors The Plant Journal © 2013 John Wiley & Sons Ltd.
A discrete element model for the investigation of the geometrically nonlinear behaviour of solids
Ockelmann, Felix; Dinkler, Dieter
2018-07-01
A three-dimensional discrete element model for elastic solids with large deformations is presented. Therefore, an discontinuum approach is made for solids. The properties of elastic material are transferred analytically into the parameters of a discrete element model. A new and improved octahedron gap-filled face-centred cubic close packing of spheres is split into unit cells, to determine the parameters of the discrete element model. The symmetrical unit cells allow a model with equal shear components in each contact plane and fully isotropic behaviour for Poisson's ratio above 0. To validate and show the broad field of applications of the new model, the pin-pin Euler elastica is presented and investigated. The thin and sensitive structure tends to undergo large deformations and rotations with a highly geometrically nonlinear behaviour. This behaviour of the elastica can be modelled and is compared to reference solutions. Afterwards, an improved more realistic simulation of the elastica is presented which softens secondary buckling phenomena. The model is capable of simulating solids with small strains but large deformations and a strongly geometrically nonlinear behaviour, taking the shear stiffness of the material into account correctly.
Studies of biaxial mechanical properties and nonlinear finite element modeling of skin.
Shang, Xituan; Yen, Michael R T; Gaber, M Waleed
2010-06-01
The objective of this research is to conduct mechanical property studies of skin from two individual but potentially connected aspects. One is to determine the mechanical properties of the skin experimentally by biaxial tests, and the other is to use the finite element method to model the skin properties. Dynamic biaxial tests were performed on 16 pieces of abdominal skin specimen from rats. Typical biaxial stress-strain responses show that skin possesses anisotropy, nonlinearity and hysteresis. To describe the stress-strain relationship in forms of strain energy function, the material constants of each specimen were obtained and the results show a high correlation between theory and experiments. Based on the experimental results, a finite element model of skin was built to model the skin's special properties including anisotropy and nonlinearity. This model was based on Arruda and Boyce's eight-chain model and Bischoff et al.'s finite element model of skin. The simulation results show that the isotropic, nonlinear eight-chain model could predict the skin's anisotropic and nonlinear responses to biaxial loading by the presence of an anisotropic prestress state.
Cheng Piao; Todd F. Shupe; R.C. Tang; Chung Y. Hse
2008-01-01
Tapered composite poles with biomimicry features as in bamboo are a new generation of wood laminated composite poles that may some day be considered as an alternative to solid wood poles that are widely used in the transmission and telecommunication fields. Five finite element models were developed with ANSYS to predict and assess the performance of five types of...
Mereghetti, A; Cerutti, F; Versaci, R; Vlachoudis, V
2012-01-01
Extended FLUKA models of accelerator beam lines can be extremely complex: heavy to manipulate, poorly versatile and prone to mismatched positioning. We developed a framework capable of creating the FLUKA model of an arbitrary portion of a given accelerator, starting from the optics configuration and a few other information provided by the user. The framework includes a builder (LineBuilder), an element database and a series of configuration and analysis scripts. The LineBuilder is a Python program aimed at dynamically assembling complex FLUKA models of accelerator beam lines: positions, magnetic fields and scorings are automatically set up, and geometry details such as apertures of collimators, tilting and misalignment of elements, beam pipes and tunnel geometries can be entered at user’s will. The element database (FEDB) is a collection of detailed FLUKA geometry models of machine elements. This framework has been widely used for recent LHC and SPS beam-machine interaction studies at CERN, and led to a dra...
Spectral element model for 2-D electrostatic fields in a linear synchronous motor
van Beek, T.A.; Curti, M.; Jansen, J.W.; Gysen, B.L.J.; Paulides, J.J.H.; Lomonova, E.A.
2017-01-01
This paper presents a fast and accurate 2-D spectral element model for analyzing electric field distributions in linear synchronous motors. The electric field distribution is derived using the electric scalar potential for static cases. The spatial potential and electric field distributions obtained
The next step in coastal numerical models: spectral/hp element methods?
DEFF Research Database (Denmark)
Eskilsson, Claes; Engsig-Karup, Allan Peter; Sherwin, Spencer J.
2005-01-01
In this paper we outline the application of spectral/hp element methods for modelling nonlinear and dispersive waves. We present one- and two-dimensional test cases for the shallow water equations and Boussinesqtype equations – including highly dispersive Boussinesq-type equations....
Accuracy of semi-analytical finite elements for modelling wave propagation in rails
CSIR Research Space (South Africa)
Andhavarapu, EV
2010-01-01
Full Text Available The semi-analytical finite element method (SAFE) is a popular method for analysing guided wave propagation in elastic waveguides of complex cross-section such as rails. The convergence of these models has previously been studied for linear...
Applications of discrete element method in modeling of grain postharvest operations
Grain kernels are finite and discrete materials. Although flowing grain can behave like a continuum fluid at times, the discontinuous behavior exhibited by grain kernels cannot be simulated solely with conventional continuum-based computer modeling such as finite-element or finite-difference methods...
Artificial intelligence and finite element modelling for monitoring flood defence structures
Pyayt, A.L.; Mokhov, I.I.; Kozionov, A.; Kusherbaeva, V.; Melnikova, N.B.; Krzhizhanovskaya, V.V.; Meijer, R.J.
2011-01-01
We present a hybrid approach to monitoring the stability of flood defence structures equipped with sensors. This approach combines the finite element modelling with the artificial intelligence for real-time signal processing and anomaly detection. This combined method has been developed for the
Finite Element Modelling of Bends and Creases during Folding Ultra Thin Stainless Steel Foils
Datta, K.; Akagi, H.; Geijselaers, Hubertus J.M.; Huetink, Han
2003-01-01
Finite Element Modelling of an ultra thin foil of SUS 304 stainless steel is carried out. These foils are 20 mm and below in thickness. The development of stresses and strains during folding of these foils is studied. The objective of this study is to induce qualities of paper in the foils of
Multiscale Model Reduction with Generalized Multiscale Finite Element Methods in Geomathematics
Efendiev, Yalchin R.; Presho, Michael
2015-01-01
In this chapter, we discuss multiscale model reduction using Generalized Multiscale Finite Element Methods (GMsFEM) in a number of geomathematical applications. GMsFEM has been recently introduced (Efendiev et al. 2012) and applied to various problems. In the current chapter, we consider some of these applications and outline the basic methodological concepts.
The aetiology of pressure sores: combining animal experiments and finite element modelling
Bosboom, E.M.H.; Oomens, C.W.J.; Bouten, C.V.C.; Janssen, J.D.; Kuipers, H.
1999-01-01
Animal experiments were performed to study the relationship between strictly controlled external mechanical loads and the onset of tissue damage. The finite element model was used to determine the local stresses and strains within the tissues during the experiments. By comparison of the results of
2017-11-13
finite element flow solver JENRE developed at the Naval Research Laboratory. The Crocco- Busemann relation is used to account for the compressibility. In...3 1. Comparison with the measurement data...Naval Research Laboratory. The Crocco-Busemann relation is used to account for the compressibility. In this wall-model implementation, the first
A numerical strategy for finite element modeling of frictionless asymmetric vocal fold collision
DEFF Research Database (Denmark)
Granados, Alba; Misztal, Marek Krzysztof; Brunskog, Jonas
2016-01-01
. Theoretical background and numerical analysis of the finite-element position-based contact model are presented, along with validation. A novel contact detection mechanism capable to detect collision in asymmetric oscillations is developed. The effect of inexact contact constraint enforcement on vocal fold...
Verschoor, M.; Jalba, A.C.
2012-01-01
Elastically deformable models have found applications in various areas ranging from mechanical sciences and engineering to computer graphics. The method of Finite Elements has been the tool of choice for solving the underlying PDE, when accuracy and stability of the computations are more important
Measurement of Temperature and Soil Properties for Finite Element Model Verification
2012-08-01
In recent years, ADOT&PF personnel have used TEMP/W, a commercially available two-dimensional finite element program, to conduct thermal modeling of various : embankment configurations in an effort to reduce the thawing of ice-rich permafrost through...
Mechanism of distal radius fracture as analyzed by 3D finite element model
International Nuclear Information System (INIS)
Tomizawa, Kazuo
2007-01-01
The purpose of this study is to see the difference of distal radius fracture between normal and osteoporotic bones and in its patterns due to limb position at injury through simulation and analysis of the biomechanics using three-dimensional (3D) finite element model. CT images were taken with SIEMENS machine, of right wrist joints of 32 and 76 years old, normal healthy man and osteoporotic woman, respectively. The wrist joint angles at CT were 70 degrees both at dorsiflexion and at palmerflexion for simulating fracture at tumbling down. The 3D bone model reconstructed from CT images with Forge software (Studio PON) was trimmed to remain the distal radial-ulnar portion and proximal carpal bones to make simulation easer, and the simplified 3D model was divided to 56,622 elements and 13,274 nodal points (normal bone) or 51,760 and 12,940 (osteoporosis), respectively, in 3 areas of different bone densities calculated with Scion Image processor. This 3D finite element model was analyzed with the software ANSYS LS-DYNA 10.0 for simulating the fracture (the defined yield stress attained) by impacting the elements of carpal bones to the radial bone joint surface with a measure of Mises stress. In osteoporotic bone, fracture was found to occur at dorsal cortex closer to the joint surface. Fracture occurred at dorsal and palmer cortex at dorsiflexion and palmerflexion, respectively. (R.T.)
Multiscale Model Reduction with Generalized Multiscale Finite Element Methods in Geomathematics
Efendiev, Yalchin R.
2015-09-02
In this chapter, we discuss multiscale model reduction using Generalized Multiscale Finite Element Methods (GMsFEM) in a number of geomathematical applications. GMsFEM has been recently introduced (Efendiev et al. 2012) and applied to various problems. In the current chapter, we consider some of these applications and outline the basic methodological concepts.
Modeling electromagnetic rail launchers at speed using 3D finite elements
International Nuclear Information System (INIS)
Rodger, D.; Leonard, P.J.; Eastham, J.F.
1991-01-01
In this paper a new finite element technique for modelling 3D transient eddy currents in moving conductors is described. This has been implemented in the MEGA software package for 2 and 3D electromagnetic field analysis. The application of the technique to railgun launchers is illustrated
Development of Laboratory Model Ecosystems as Early Warning Elements of Environmental Pollution
1974-12-01
AD-AOll 851 DEVELOPMENT OF LABORATORY MODEL ECOSYSTEMS AS EARLY WARNING ELEMENTS OF ENVIRONMENTAL POLLUTION Robert L. Metcalf... ENVIRONMENTAL POLLUTION Robert L. Metcalf, Ph. D. University of Illinois Urbana-Champaign, Illinois INTRODUCTION Problems of environmental pollution with...house dust is unsafe to breathe (Ewing and Pearson, 1974). Most of the source of our concern about environmental pollution by trace substances relates
Press, J.; Broughton, J.; Kudela, R. M.
2014-12-01
Suspended and dissolved trace elements are key determinants of water quality in estuarine and coastal waters. High concentrations of trace element pollutants in the San Francisco Bay estuary necessitate consistent and thorough monitoring to mitigate adverse effects on biological systems and the contamination of water and food resources. Although existing monitoring programs collect annual in situ samples from fixed locations, models proposed by Benoit, Kudela, & Flegal (2010) enable calculation of the water column total concentration (WCT) and the water column dissolved concentration (WCD) of 14 trace elements in the San Francisco Bay from a more frequently sampled metric—suspended solids concentration (SSC). This study tests the application of these models with SSC calculated from remote sensing data, with the aim of validating a tool for continuous synoptic monitoring of trace elements in the San Francisco Bay. Using HICO imagery, semi-analytical and empirical SSC algorithms were tested against a USGS dataset. A single-band method with statistically significant linear fit (p Arsenic, Iron, and Lead in the southern region of the Bay were found to exceed EPA water quality criteria for human health and aquatic life. The results of this study demonstrate the potential of monitoring programs using remote observation of trace element concentrations, and provide the foundation for investigation of pollutant sources and pathways over time.
International Nuclear Information System (INIS)
Barbieri, R.A.; Gastal, F.P.S.L.; Filho, A.C.
2005-01-01
Unbounded prestressed concrete has a growing importance all over the world and may be an useful technique for the structures involved in the construction of nuclear facilities. The absence of bonding means no strain compatibility so that equations developed for reinforced concrete are no longer valid. Practical estimates about the ultimate stress in the unbounded tendons may be obtained with empirical or numerical methods only. In order to contribute to the understanding on the behaviour of unbounded prestressed concrete members, a numerical model has been developed using a hybrid type finite element formulation for planar frame structures. Instead of short elements, as in the conventional finite element formulation, long elements may be used, improving computational efficiency. A further advantage is that the curvature variation within the element is obtained with higher accuracy if compared to the traditional formulation. This feature is important for unbounded tendons since its stresses depend on the whole member deformation. Second order effects in the planar frame are considered with either Updated or Partially Updated Lagrangian approaches. Instantaneous and time dependent behaviour as well as cyclic loads are considered too. Comparison with experimental results for prestressed concrete beams shows the adequacy of the proposed model. (authors)
Jin, Qiyun; Thompson, David J.; Lurcock, Daniel E. J.; Toward, Martin G. R.; Ntotsios, Evangelos
2018-05-01
A numerical model is presented for the ground-borne vibration produced by trains running in tunnels. The model makes use of the assumption that the geometry and material properties are invariant in the axial direction. It is based on the so-called two-and-a-half dimensional (2.5D) coupled Finite Element and Boundary Element methodology, in which a two-dimensional cross-section is discretised into finite elements and boundary elements and the third dimension is represented by a Fourier transform over wavenumbers. The model is applied to a particular case of a metro line built with a cast-iron tunnel lining. An equivalent continuous model of the tunnel is developed to allow it to be readily implemented in the 2.5D framework. The tunnel structure and the track are modelled using solid and beam finite elements while the ground is modelled using boundary elements. The 2.5D track-tunnel-ground model is coupled with a train consisting of several vehicles, which are represented by multi-body models. The response caused by the passage of a train is calculated as the sum of the dynamic component, excited by the combined rail and wheel roughness, and the quasi-static component, induced by the constant moving axle loads. Field measurements have been carried out to provide experimental validation of the model. These include measurements of the vibration of the rail, the tunnel invert and the tunnel wall. In addition, simultaneous measurements were made on the ground surface above the tunnel. Rail roughness and track characterisation measurements were also made. The prediction results are compared with measured vibration obtained during train passages, with good agreement.
Finite element speaker-specific face model generation for the study of speech production.
Bucki, Marek; Nazari, Mohammad Ali; Payan, Yohan
2010-08-01
In situations where automatic mesh generation is unsuitable, the finite element (FE) mesh registration technique known as mesh-match-and-repair (MMRep) is an interesting option for quickly creating a subject-specific FE model by fitting a predefined template mesh onto the target organ. The irregular or poor quality elements produced by the elastic deformation are corrected by a 'mesh reparation' procedure ensuring that the desired regularity and quality standards are met. Here, we further extend the MMRep capabilities and demonstrate the possibility of taking into account additional relevant anatomical features. We illustrate this approach with an example of biomechanical model generation of a speaker's face comprising face muscle insertions. While taking advantage of the a priori knowledge about tissues conveyed by the template model, this novel, fast and automatic mesh registration technique makes it possible to achieve greater modelling realism by accurately representing the organ surface as well as inner anatomical or functional structures of interest.
Finite element modeling of stress corrosion cracking for electromagnetic nondestructive evaluations
International Nuclear Information System (INIS)
Wang, J.; Yusa, N.; Hashizume, H.
2012-01-01
This paper discusses appropriate numerical model for a stress corrosion crack (SCC) from the viewpoint of anisotropy of their conductivity. Two SCCs, which are introduced into a plate of type 316 stainless steel, are considered. Finite element simulations are carried out to evaluate the conductivity. In the simulations, the cracks are modeled as a region with a constant width on the basis of the destructive tests. The results show the conductivity on direction of width has large effect to the accuracy of numerical modeling of SCC, whereas the conductivities on direction of length and depth almost do not have remarkable effects. The results obtained by this study indicate that distribution of conductivity along the surface of a crack would be more important than the anisotropy in modeling SCCs in finite element simulations
Finite element modeling of camber evolution during sintering of bi-layers
DEFF Research Database (Denmark)
Tadesse Molla, Tesfaye; Ni, De Wei; Bulatova, Regina
2014-01-01
The need for understanding the mechanisms and optimization of shape distortions during sintering of bilayers is necessary while producing structures with functionally graded architectures. A finite element model based on the continuum theory of sintering was developed to understand the camber...... developments during sintering of bilayers composed of La0.85Sr0.15MnO3 and Ce0.9Gd0.1O1.95 tapes. Free shrinkage kinetics of both tapes were used to estimate the parameters necessary for the finite element models. Systematic investigations of the factors affecting the kinetics of distortions such as gravity...... and friction as well as the initial geometric parameters of the bilayers were made using optical dilatometry experiments and the model. The developed models were able to capture the observed behaviors of the bilayers’ distortions during sintering. Finally, we present the importance of understanding and hence...
The finite-difference and finite-element modeling of seismic wave propagation and earthquake motion
International Nuclear Information System (INIS)
Moszo, P.; Kristek, J.; Galis, M.; Pazak, P.; Balazovijech, M.
2006-01-01
Numerical modeling of seismic wave propagation and earthquake motion is an irreplaceable tool in investigation of the Earth's structure, processes in the Earth, and particularly earthquake phenomena. Among various numerical methods, the finite-difference method is the dominant method in the modeling of earthquake motion. Moreover, it is becoming more important in the seismic exploration and structural modeling. At the same time we are convinced that the best time of the finite-difference method in seismology is in the future. This monograph provides tutorial and detailed introduction to the application of the finite-difference, finite-element, and hybrid finite-difference-finite-element methods to the modeling of seismic wave propagation and earthquake motion. The text does not cover all topics and aspects of the methods. We focus on those to which we have contributed. (Author)
DEFF Research Database (Denmark)
Cai, Hongzhu; Hu, Xiangyun; Xiong, Bin
2017-01-01
method which is unconditionally stable. We solve the diffusion equation for the electric field with a total field formulation. The finite element system of equation is solved using the direct method. The solutions of electric field, at different time, can be obtained using the effective time stepping...... method with trivial computation cost once the matrix is factorized. We try to keep the same time step size for a fixed number of steps using an adaptive time step doubling (ATSD) method. The finite element modeling domain is also truncated using a semi-adaptive method. We proposed a new boundary...... condition based on approximating the total field on the modeling boundary using the primary field corresponding to a layered background model. We validate our algorithm using several synthetic model studies....
International Nuclear Information System (INIS)
Young, G.A. Jr.; Najafabadi, R.; Strohmayer, W.; Baldrey, D.G.; Hamm, B.; Harris, J.; Sticht, J.; Wimmer, E.
2003-01-01
Atomistic modeling methods were employed to investigate the effects of impurity elements on the metallurgy, irradiation embrittlement, and environmentally assisted cracking of nickel-base alloys exposed to nuclear environments. Calculations were performed via ab initio atomistic modeling methods to ensure the accuracy and reliability of the results. A Griffith-type fracture criterion was used to quantitatively assess the effect of elements or element pairs on the grain boundary cohesive strength. In order of most embrittling to most strengthening, the elements are ranked as: He, Li, S, H, C, Zr, P, Fe, Mn, Nb, Cr, and B. Helium is strongly embrittling (-2.04 eV/atom lowering of the Griffith energy), phosphorus has little effect on the grain boundary (0.1 eV/atom), and boron offers appreciable strengthening (1.03 eV/atom increase in the Griffith energy). Calculations for pairs of elements (H-Li, H-B, H-C, H-P, and H-S) show little interaction on the grain boundary cohesive energy, so that for the conditions studied, linear superposition of elemental effects is a good approximation. These calculations help explain metallurgical effects (e.g. why boron can strengthen grain boundaries), irradiation embrittlement (e.g. how boron transmutation results in grain boundary embrittlement), as well as how grain boundary impurity elements can affect environmentally assisted cracking (i.e. low temperature crack propagation and stress corrosion cracking) of nickel-base alloys
Kim, H. Alicia; Hardie, Robert; Yamakov, Vesselin; Park, Cheol
2015-01-01
This paper is the second part of a two-part series where the first part presents a molecular dynamics model of a single Boron Nitride Nanotube (BNNT) and this paper scales up to multiple BNNTs in a polymer matrix. This paper presents finite element (FE) models to investigate the effective elastic and piezoelectric properties of (BNNT) nanocomposites. The nanocomposites studied in this paper are thin films of polymer matrix with aligned co-planar BNNTs. The FE modelling approach provides a computationally efficient way to gain an understanding of the material properties. We examine several FE models to identify the most suitable models and investigate the effective properties with respect to the BNNT volume fraction and the number of nanotube walls. The FE models are constructed to represent aligned and randomly distributed BNNTs in a matrix of resin using 2D and 3D hollow and 3D filled cylinders. The homogenisation approach is employed to determine the overall elastic and piezoelectric constants for a range of volume fractions. These models are compared with an analytical model based on Mori-Tanaka formulation suitable for finite length cylindrical inclusions. The model applies to primarily single-wall BNNTs but is also extended to multi-wall BNNTs, for which preliminary results will be presented. Results from the Part 1 of this series can help to establish a constitutive relationship for input into the finite element model to enable the modeling of multiple BNNTs in a polymer matrix.
Sanbi, M.; Saadani, R.; Sbai, K.; Rahmoune, M.
2015-01-01
Theoretical and numerical results of the modeling of a smart plate are presented for optimal active vibration control. The smart plate consists of a rectangular aluminum piezocomposite plate modeled in cantilever configuration with surface bonded thermopiezoelectric patches. The patches are symmetrically bonded on top and bottom surfaces. A generic thermopiezoelastic theory for piezocomposite plate is derived, using linear thermopiezoelastic theory and Kirchhoff assumptions. Finite element eq...
Two-dimensional finite element heat transfer model of softwood. Part II, Macrostructural effects
Hongmei Gu; John F. Hunt
2006-01-01
A two-dimensional finite element model was used to study the effects of structural features on transient heat transfer in softwood lumber with various orientations. Transient core temperature was modeled for lumber samples âcutâ from various locations within a simulated log. The effects of ring orientation, earlywood to latewood (E/L) ratio, and ring density were...
International Nuclear Information System (INIS)
Moosavi, K.; Setayeshi, S.; Maragheh, M.Gh.; Ahmadi, S.J.; Kardan, M.R.; Banaem, L.M.
2009-01-01
In this study, an experimental design using artificial neural networks for an optimization on the strontium separation model for fission products (inactive trace elements) is investigated. The goal is to optimize the separation parameters to achieve maximum amount of strontium that is separated from the fission products. The result of the optimization method causes a proper purity of Strontium-89 that was separated from the fission products. It is also shown that ANN may be establish a method to optimize the separation model.
Extensions to a nonlinear finite element axisymmetric shell model based on Reissner's shell theory
International Nuclear Information System (INIS)
Cook, W.A.
1981-01-01
A finite element shell-of-revolution model has been developed to analyze shipping containers under severe impact conditions. To establish the limits for this shell model, I studied the basic assumptions used in its development; these are listed in this paper. Several extensions were evident from the study of these limits: a thick shell, a plastic hinge, and a linear normal stress. (orig./HP)
Finite Element Based Lagrangian Vortex Dynamics Model for Wind Turbine Aerodynamics
International Nuclear Information System (INIS)
McWilliam, Michael K; Crawford, Curran
2014-01-01
This paper presents a novel aerodynamic model based on Lagrangian Vortex Dynamics (LVD) formulated using a Finite Element (FE) approach. The advantage of LVD is improved fidelity over Blade Element Momentum Theory (BEMT) while being faster than Numerical Navier-Stokes Models (NNSM) in either primitive or velocity-vorticity formulations. The model improves on conventional LVD in three ways. First, the model is based on an error minimization formulation that can be solved with fast root finding algorithms. In addition to improving accuracy, this eliminates the intrinsic numerical instability of conventional relaxed wake simulations. The method has further advantages in optimization and aero-elastic simulations for two reasons. The root finding algorithm can solve the aerodynamic and structural equations simultaneously, avoiding Gauss-Seidel iteration for compatibility constraints. The second is that the formulation allows for an analytical definition for sensitivity calculations. The second improvement comes from a new discretization scheme based on an FE formulation and numerical quadrature that decouples the spatial, influencing and temporal meshes. The shape for each trailing filament uses basis functions (interpolating splines) that allow for both local polynomial order and element size refinement. A completely independent scheme distributes the influencing (vorticity) elements along the basis functions. This allows for concentrated elements in the near wake for accuracy and progressively less in the far-wake for efficiency. Finally the third improvement is the use of a far-wake model based on semi-infinite vortex cylinders where the radius and strength are related to the wake state. The error-based FE formulation allows the transition to the far wake to occur across a fixed plane
Finite element modeling of single-walled carbon nanotubes with introducing a new wall thickness
International Nuclear Information System (INIS)
Jalalahmadi, B; Naghdabadi, R
2007-01-01
A three-dimensional finite element (FE) model for armchair, zigzag and chiral single-walled carbon nanotubes (SWCNTs) is proposed. By considering the covalent bonds as connecting elements between carbon atoms, a nanotube is simulated as a space frame-like structure. Here, the carbon atoms act as joints of the connecting elements. To create the FE models, nodes are placed at the locations of carbon atoms and the bonds between them are modeled using three-dimensional elastic beam elements. Using Morse atomic potential, the elastic moduli of beam elements are obtained via considering a linkage between molecular and continuum mechanics. Also, a new wall thickness ( bond diameter) equal to 0.1296 nm is introduced. In order to demonstrate the applicability of FE model and new wall thickness, the influence of tube wall thickness, diameter and chirality on the Young's modulus of SWCNTs is investigated. It is found that the choice of wall thickness significantly affects the calculation of Young's modulus. For the values of wall thickness used in the literature, the Young's moduli are estimated which agree very well with the corresponding theoretical results and experimental measurements. We also investigate the dependence of elastic moduli on diameter and chirality of the nanotube. The larger tube diameter, the higher Young's modulus of SWCNT. The Young's modulus of chiral SWCNTs is found to be generally larger than that of armchair and zigzag SWCNTs. The presented results demonstrate that the proposed FE model and wall thickness may provide a valuable tool for studying the mechanical behavior of carbon nanotubes and their application in nano-composites
Leser, Patrick E.; Hochhalter, Jacob D.; Newman, John A.; Leser, William P.; Warner, James E.; Wawrzynek, Paul A.; Yuan, Fuh-Gwo
2015-01-01
Utilizing inverse uncertainty quantification techniques, structural health monitoring can be integrated with damage progression models to form probabilistic predictions of a structure's remaining useful life. However, damage evolution in realistic structures is physically complex. Accurately representing this behavior requires high-fidelity models which are typically computationally prohibitive. In the present work, a high-fidelity finite element model is represented by a surrogate model, reducing computation times. The new approach is used with damage diagnosis data to form a probabilistic prediction of remaining useful life for a test specimen under mixed-mode conditions.
Finite element modeling of surface subsidence induced by underground coal mining
International Nuclear Information System (INIS)
Su, D.W.H.
1992-01-01
The ability to predict the effects of longwall mining on topography and surface structures is important for any coal company in making permit applications and anticipating potential mining problems. The sophisticated finite element model described and evaluated in this paper is based upon five years of underground and surface observations and evolutionary development of modeling techniques and attributes. The model provides a very powerful tool to address subsidence and other ground control questions. The model can be used to calculate postmining stress and strain conditions at any horizon between the mine and the ground surface. This holds the promise of assisting in the prediction of mining-related hydrological effects
A 3D finite element simulation model for TBM tunnelling in soft ground
Kasper, Thomas; Meschke, Günther
2004-12-01
A three-dimensional finite element simulation model for shield-driven tunnel excavation is presented. The model takes into account all relevant components of the construction process (the soil and the ground water, the tunnel boring machine with frictional contact to the soil, the hydraulic jacks, the tunnel lining and the tail void grouting). The paper gives a detailed description of the model components and the stepwise procedure to simulate the construction process. The soil and the grout material are modelled as saturated porous media using a two-field finite element formulation. This allows to take into account the groundwater, the grouting pressure and the fluid interaction between the soil and slurry at the cutting face and between the soil and grout around the tail void. A Cam-Clay plasticity model is used to describe the material behaviour of cohesive soils. The cementitious grouting material in the tail void is modelled as an ageing elastic material with time-dependent stiffness and permeability. To allow for an automated computation of arbitrarily long and also curvilinear driving paths with suitable finite element meshes, the simulation procedure has been fully automated. The simulation of a tunnel advance in soft cohesive soil below the ground water table is presented and the results are compared with measurements taken from the literature. Copyright
Finite element modelling of fibre Bragg grating strain sensors and experimental validation
Malik, Shoaib A.; Mahendran, Ramani S.; Harris, Dee; Paget, Mark; Pandita, Surya D.; Machavaram, Venkata R.; Collins, David; Burns, Jonathan M.; Wang, Liwei; Fernando, Gerard F.
2009-03-01
Fibre Bragg grating (FBG) sensors continue to be used extensively for monitoring strain and temperature in and on engineering materials and structures. Previous researchers have also developed analytical models to predict the loadtransfer characteristics of FBG sensors as a function of applied strain. The general properties of the coating or adhesive that is used to surface-bond the FBG sensor to the substrate has also been modelled using finite element analysis. In this current paper, a technique was developed to surface-mount FBG sensors with a known volume and thickness of adhesive. The substrates used were aluminium dog-bone tensile test specimens. The FBG sensors were tensile tested in a series of ramp-hold sequences until failure. The reflected FBG spectra were recorded using a commercial instrument. Finite element analysis was performed to model the response of the surface-mounted FBG sensors. In the first instance, the effect of the mechanical properties of the adhesive and substrate were modelled. This was followed by modelling the volume of adhesive used to bond the FBG sensor to the substrate. Finally, the predicted values obtained via finite element modelling were correlated to the experimental results. In addition to the FBG sensors, the tensile test specimens were instrumented with surface-mounted electrical resistance strain gauges.
Development of a user element in ABAQUS for modelling of cohesive laws in composite structures
DEFF Research Database (Denmark)
Feih, S.
2006-01-01
forward, and most existing publications consider theoretical and therefore simpler softening shapes. In this article, bridging laws were implemented intoan interface element in the UEL user subroutine in the finite element code ABAQUS. Comparison with different experimental data points for crack opening...... measurements of the crack growth resistance and the end opening of the notch. The advantage of this method is that these bridging laws represent material laws independent of the specimen geometry. However, theadaption of the experimentally determined shape to a numerically valid model shape is not straight...
Applications of a global nuclear-structure model to studies of the heaviest elements
International Nuclear Information System (INIS)
Moeller, P.; Nix, J.R.
1993-01-01
We present some new results on heavy-element nuclear-structure properties calculated on the basis of the finite-range droplet model and folded-Yukawa single-particle potential. Specifically, we discuss calculations of nuclear ground-state masses and microscopic corrections, α-decay properties, β-decay properties, fission potential-energy surfaces, and spontaneous-fission half-lives. These results, obtained in a global nuclear-structure approach, are particularly reliable for describing the stability properties of the heaviest elements
Modeling approach for annular-fuel elements using the ASSERT-PV subchannel code
International Nuclear Information System (INIS)
Dominguez, A.N.; Rao, Y.
2012-01-01
The internally and externally cooled annular fuel (hereafter called annular fuel) is under consideration for a new high burn-up fuel bundle design in Atomic Energy of Canada Limited (AECL) for its current, and its Generation IV reactor. An assessment of different options to model a bundle fuelled with annular fuel elements is presented. Two options are discussed: 1) Modify the subchannel code ASSERT-PV to handle multiple types of elements in the same bundle, and 2) coupling ASSERT-PV with an external application. Based on this assessment, the selected option is to couple ASSERT-PV with the thermalhydraulic system code CATHENA. (author)
International Nuclear Information System (INIS)
Brown, T.A.; Gillespie, G.H.
2000-01-01
Ion-beam optics models for simulating electrostatic prisms (deflectors) of different geometries have been developed for the envelope (matrix) computer code TRACE 3-D as a part of the development of a suite of electrostatic beamline element models which includes lenses, acceleration columns, quadrupoles and prisms. The models for electrostatic prisms are described in this paper. The electrostatic prism model options allow the first-order modeling of cylindrical, spherical and toroidal electrostatic deflectors. The application of these models in the development of ion-beam transport systems is illustrated through the modeling of a spherical electrostatic analyzer as a component of the new low-energy beamline at the Center for Accelerator Mass Spectrometry. Although initial tests following installation of the new beamline showed that the new spherical electrostatic analyzer was not behaving as predicted by these first-order models, operational conditions were found under which the analyzer now works properly as a double-focusing spherical electrostatic prism
Neurosurgery simulation using non-linear finite element modeling and haptic interaction
Lee, Huai-Ping; Audette, Michel; Joldes, Grand R.; Enquobahrie, Andinet
2012-02-01
Real-time surgical simulation is becoming an important component of surgical training. To meet the realtime requirement, however, the accuracy of the biomechancial modeling of soft tissue is often compromised due to computing resource constraints. Furthermore, haptic integration presents an additional challenge with its requirement for a high update rate. As a result, most real-time surgical simulation systems employ a linear elasticity model, simplified numerical methods such as the boundary element method or spring-particle systems, and coarse volumetric meshes. However, these systems are not clinically realistic. We present here an ongoing work aimed at developing an efficient and physically realistic neurosurgery simulator using a non-linear finite element method (FEM) with haptic interaction. Real-time finite element analysis is achieved by utilizing the total Lagrangian explicit dynamic (TLED) formulation and GPU acceleration of per-node and per-element operations. We employ a virtual coupling method for separating deformable body simulation and collision detection from haptic rendering, which needs to be updated at a much higher rate than the visual simulation. The system provides accurate biomechancial modeling of soft tissue while retaining a real-time performance with haptic interaction. However, our experiments showed that the stability of the simulator depends heavily on the material property of the tissue and the speed of colliding objects. Hence, additional efforts including dynamic relaxation are required to improve the stability of the system.
FEMWATER: a finite-element model of water flow through saturated-unsaturated porous media
International Nuclear Information System (INIS)
Yeh, G.T.; Ward, D.S.
1980-10-01
Upon examining the Water Movement Through Saturated-Unsaturated Porous Media: A Finite-Element Galerkin Model, it was felt that the model should be modified and expanded. The modification is made in calculating the flow field in a manner consistent with the finite element approach, in evaluating the moisture-content increasing rate within the region of interest, and in numerically computing the nonlinear terms. With these modifications, the flow field is continuous everywhere in the flow regime, including element boundaries and nodal points, and the mass loss through boundaries is much reduced. Expansion is made to include four additional numerical schemes which would be more appropriate for many situations. Also, to save computer storage, all arrays pertaining to the boundary condition information are compressed to smaller dimension, and to ease the treatment of different problems, all arrays are variably dimensioned in all subroutines. This report is intended to document these efforts. In addition, in the derivation of finite-element equations, matrix component representation is used, which is believed more readable than the matrix representation in its entirety. Two identical sample problems are simulated to show the difference between the original and revised models
Accuracy of finite-element models for the stress analysis of multiple-holed moderator blocks
International Nuclear Information System (INIS)
Smith, P.D.; Sullivan, R.M.; Lewis, A.C.; Yu, H.J.
1981-01-01
Two steps have been taken to quantify and improve the accuracy in the analysis. First, the limitations of various approximation techniques have been studied with the aid of smaller benchmark problems containing fewer holes. Second, a new family of computer programs has been developed for handling such large problems. This paper describes the accuracy studies and the benchmark problems. A review is given of some proposed modeling techniques including local mesh refinement, homogenization, a special-purpose finite element, and substructuring. Some limitations of these approaches are discussed. The new finite element programs and the features that contribute to their efficiency are discussed. These include a standard architecture for out-of-core data processing and an equation solver that operates on a peripheral array processor. The central conclusions of the paper are: (1) modeling approximation methods such as local mesh refinement and homogenization tend to be unreliable, and they should be justified by a fine mesh benchmark analysis; and (2) finite element codes are now available that can achieve accurate solutions at a reasonable cost, and there is no longer a need to employ modeling approximations in the two-dimensional analysis of HTGR fuel elements. 10 figures
Yang, Sam
The dissertation presents the mathematical formulation, experimental validation, and application of a volume element model (VEM) devised for modeling, simulation, and optimization of energy systems in their early design stages. The proposed model combines existing modeling techniques and experimental adjustment to formulate a reduced-order model, while retaining sufficient accuracy to serve as a practical system-level design analysis and optimization tool. In the VEM, the physical domain under consideration is discretized in space using lumped hexahedral elements (i.e., volume elements), and the governing equations for the variable of interest are applied to each element to quantify diverse types of flows that cross it. Subsequently, a system of algebraic and ordinary differential equations is solved with respect to time and scalar (e.g., temperature, relative humidity, etc.) fields are obtained in both spatial and temporal domains. The VEM is capable of capturing and predicting dynamic physical behaviors in the entire system domain (i.e., at system level), including mutual interactions among system constituents, as well as with their respective surroundings and cooling systems, if any. The VEM is also generalizable; that is, the model can be easily adapted to simulate and optimize diverse systems of different scales and complexity and attain numerical convergence with sufficient accuracy. Both the capability and generalizability of the VEM are demonstrated in the dissertation via thermal modeling and simulation of an Off-Grid Zero Emissions Building, an all-electric ship, and a vapor compression refrigeration (VCR) system. Furthermore, the potential of the VEM as an optimization tool is presented through the integrative thermodynamic optimization of a VCR system, whose results are used to evaluate the trade-offs between various objective functions, namely, coefficient of performance, second law efficiency, pull-down time, and refrigerated space temperature, in
Finite element modelling of the foot for clinical application: A systematic review.
Behforootan, Sara; Chatzistergos, Panagiotis; Naemi, Roozbeh; Chockalingam, Nachiappan
2017-01-01
Over the last two decades finite element modelling has been widely used to give new insight on foot and footwear biomechanics. However its actual contribution for the improvement of the therapeutic outcome of different pathological conditions of the foot, such as the diabetic foot, remains relatively limited. This is mainly because finite element modelling has only been used within the research domain. Clinically applicable finite element modelling can open the way for novel diagnostic techniques and novel methods for treatment planning/optimisation which would significantly enhance clinical practice. In this context this review aims to provide an overview of modelling techniques in the field of foot and footwear biomechanics and to investigate their applicability in a clinical setting. Even though no integrated modelling system exists that could be directly used in the clinic and considerable progress is still required, current literature includes a comprehensive toolbox for future work towards clinically applicable finite element modelling. The key challenges include collecting the information that is needed for geometry design, the assignment of material properties and loading on a patient-specific basis and in a cost-effective and non-invasive way. The ultimate challenge for the implementation of any computational system into clinical practice is to ensure that it can produce reliable results for any person that belongs in the population for which it was developed. Consequently this highlights the need for thorough and extensive validation of each individual step of the modelling process as well as for the overall validation of the final integrated system. Copyright © 2016 IPEM. Published by Elsevier Ltd. All rights reserved.
International Nuclear Information System (INIS)
Caty, O.; Maire, E.; Youssef, S.; Bouchet, R.
2008-01-01
Closed-cell cellular materials exhibit several interesting properties. These properties are, however, very difficult to simulate and understand from the knowledge of the cellular microstructure. This problem is mostly due to the highly complex organization of the cells and to their very fine walls. X-ray tomography can produce three-dimensional (3-D) images of the structure, enabling one to visualize locally the damage of the cell walls that would result in the structure collapsing. These data could be used for meshing with continuum elements of the structure for finite element (FE) calculations. But when the density is very low, the walls are fine and the meshes based on continuum elements are not suitable to represent accurately the structure while preserving the representativeness of the model in terms of cell size. This paper presents a shell FE model obtained from tomographic 3-D images that allows bigger volumes of low-density closed-cell cellular materials to be calculated. The model is enriched by direct thickness measurement on the tomographic images. The values measured are ascribed to the shell elements. To validate and use the model, a structure composed of stainless steel hollow spheres is firstly compressed and scanned to observe local deformations. The tomographic data are also meshed with shells for a FE calculation. The convergence of the model is checked and its performance is compared with a continuum model. The global behavior is compared with the measures of the compression test. At the local scale, the model allows the local stress and strain field to be calculated. The calculated deformed shape is compared with the deformed tomographic images
Subcellular distribution of styrene oxide in rat liver
International Nuclear Information System (INIS)
Pacifici, G.M.; Cuoci, L.; Rane, A.
1984-01-01
The subcellular distribution of ( 3 H)-styrene-7,8-oxide was studied in the rat liver. The compound was added to liver homogenate to give a final concentration of 2 X 10(-5); 2 X 10(-4) and 2 X 10(-3) M. Subcellular fractions were obtained by differential centrifugation. Most of styrene oxide (59-88%) was associated with the cytosolic fraction. Less than 15 percent of the compound was retrieved in each of the nuclear, mitochondrial and microsomal fractions. A considerable percentage of radioactivity was found unextractable with the organic solvents, suggesting that styrene oxide reacted with the endogenous compounds. The intracellular distribution of this epoxide was also studied in the perfused rat liver. Comparable results with those previously described were obtained. The binding of styrene oxide to the cytosolic protein was investigated by equilibrium dialysis and ultrafiltration. Only a small percentage of the compound was bound to protein
Modelling the tearing crack growth in a ductile ferritic steel using X-FEM elements
International Nuclear Information System (INIS)
Simatos, A.; Prabel, B.; Marie, S.; Nedelec, M.; Combescure, A.
2012-01-01
Extended Finite Element Method (X-FEM) is used to model a cracked structure without meshing explicitly the crack. Indeed, the crack is represented by a discontinuity of the displacement field through additional degrees of freedom using Heaviside type function or derived from the Irwin's singular fields. Initially, the stress integration in the XFEM framework supposed to divide the cut elements into sub-triangles that are conform to the crack. This was motivated in order to integrate the behaviour accurately on both sides of the crack in particular at proximity of the crack tip where singular enrichments are present. This strategy induces field projections from the usual Gauss point configuration to a variable new one that depends on the crack position in the element. For ductile fracture modelization, this approach is not applicable, because in presence of large scale yield, the projection of internal variable fields is not conservative, in particular at proximity of the crack tip. In order to circumvent this problem, a new integration strategy was proposed by B. Prabel. It consists in using 64 Gauss points that are placed without regards to the crack position. This simple integration scheme permits to take implicitly into account the crack position and the fields in the element in an accurate and consistent way. This strategy was used in problem calculation for which the plastic radius remained small. It allowed introducing the over integrated elements in the probable propagation zone, just before plastification. In the case of ductile tearing, the plasticity is not confined near the crack tip and an improvement of the proposed strategy is made. This is then used to model large ductile crack growth in a ductile ferritic steel. To validate the predictions, the modelization is compared to a second F.E. calculation using the node release technique for the crack propagation. It is then shown that the two predictions are strictly equivalents. (authors)
A Floating Node Method for the Modelling of Discontinuities Within a Finite Element
Pinho, Silvestre T.; Chen, B. Y.; DeCarvalho, Nelson V.; Baiz, P. M.; Tay, T. E.
2013-01-01
This paper focuses on the accurate numerical representation of complex networks of evolving discontinuities in solids, with particular emphasis on cracks. The limitation of the standard finite element method (FEM) in approximating discontinuous solutions has motivated the development of re-meshing, smeared crack models, the eXtended Finite Element Method (XFEM) and the Phantom Node Method (PNM). We propose a new method which has some similarities to the PNM, but crucially: (i) does not introduce an error on the crack geometry when mapping to natural coordinates; (ii) does not require numerical integration over only part of a domain; (iii) can incorporate weak discontinuities and cohesive cracks more readily; (iv) is ideally suited for the representation of multiple and complex networks of (weak, strong and cohesive) discontinuities; (v) leads to the same solution as a finite element mesh where the discontinuity is represented explicitly; and (vi) is conceptually simpler than the PNM.
Finite element modelling for mode-I fracture behaviour of CFRP
Chetan, H. C.; Kattimani, Subhaschandra; Murigendrappa, S. M.
2018-04-01
Debonding is a major failure mechanism in Carbon Fiber Reinforced Polymer (CFRP) due to presence of many adhesion joins, in between many layers. In the current study a finite element simulation is carried out using Virtual Crack Closure Technique (VCCT) and Cohesive Zone Modelling (CZM) using Abaqus as analysis tool. A comparative study is performed in to order analyze convergence of results from CZM and VCCT. It was noted that CZM results matched well with published literature. The results from VCCT were also in good comparison with experimental data of published literature, but were seen to be overestimated. Parametric study is performed to evaluate the variation of input parameters like initial stiffness, element size, peak stress and energy release rate `G'. From the numerical evaluation, it was noted that CZM simulation relies largely on element size and peak stress.
Plant subcellular proteomics: Application for exploring optimal cell function in soybean.
Wang, Xin; Komatsu, Setsuko
2016-06-30
Plants have evolved complicated responses to developmental changes and stressful environmental conditions. Subcellular proteomics has the potential to elucidate localized cellular responses and investigate communications among subcellular compartments during plant development and in response to biotic and abiotic stresses. Soybean, which is a valuable legume crop rich in protein and vegetable oil, can grow in several climatic zones; however, the growth and yield of soybean are markedly decreased under stresses. To date, numerous proteomic studies have been performed in soybean to examine the specific protein profiles of cell wall, plasma membrane, nucleus, mitochondrion, chloroplast, and endoplasmic reticulum. In this review, methods for the purification and purity assessment of subcellular organelles from soybean are summarized. In addition, the findings from subcellular proteomic analyses of soybean during development and under stresses, particularly flooding stress, are presented and the proteins regulated among subcellular compartments are discussed. Continued advances in subcellular proteomics are expected to greatly contribute to the understanding of the responses and interactions that occur within and among subcellular compartments during development and under stressful environmental conditions. Subcellular proteomics has the potential to investigate the cellular events and interactions among subcellular compartments in response to development and stresses in plants. Soybean could grow in several climatic zones; however, the growth and yield of soybean are markedly decreased under stresses. Numerous proteomics of cell wall, plasma membrane, nucleus, mitochondrion, chloroplast, and endoplasmic reticulum was carried out to investigate the respecting proteins and their functions in soybean during development or under stresses. In this review, methods of subcellular-organelle enrichment and purity assessment are summarized. In addition, previous findings of
Modeling of asphalt by means of discrete element method – an initial study
DEFF Research Database (Denmark)
Feng, Huan; Hededal, Ole; Stang, Henrik
of conducting time-consuming and lab-costly procedures. The use of numerical models, capable of reducing greatly the testing cost, has shown great potential in characterizing asphalt-aggregate mixtures for both material evaluation and structural design purposes, [1],[2]. Discrete element method (DEM) is one...... – will be applied. The work presented here will focus on the discrete element method as a tool for modelling composite materials, i.e. determination of a representative volume; boundary conditions; characterisation of the components mastic (binder + filler) and aggregates; and establishment of virtual test samples....... Results from initial tests will be presented and the future development of the model towards characterising asphalt from its composition will be outlined....
Developing ISM Dust Grain Models with Precision Elemental Abundances from IXO
Valencic, L. A.; Smith, R. K.; Juet, A.
2009-01-01
The exact nature of interstellar dust grains in the Galaxy remains mysterious, despite their ubiquity. Many viable models exist, based on available IR-UV data and assumed elemental abundances. However, the abundances, which are perhaps the most stringent constraint, are not well known: modelers must use proxies in the absence of direct measurements for the diffuse interstellar medium (ISM). Recent revisions of these proxy values have only added to confusion over which is the best representative for the diffuse ISM, and highlighted the need for direct, high signal-to-noise measurements from the ISM itself. The International X-ray Observatory's superior facilities will enable high-precision elemental abundance measurements. We ill show how these results will measure both the overall ISM abundances and challenge dust models, allowing us to construct a more realistic picture of the ISM.
A Three End-Member Mixing Model Based on Isotopic Composition and Elemental Ratio
Directory of Open Access Journals (Sweden)
Kon-Kee Liu Shuh-Ji Kao
2007-01-01
Full Text Available A three end-member mixing model based on nitrogen isotopic composition and organic carbon to nitrogen ratio of suspended particulate matter in an aquatic environment has been developed. Mathematical expressions have been derived for the calculation of the fractions of nitrogen or organic carbon originating from three different sources of distinct isotopic and elemental compositions. The model was successfully applied to determine the contributions from anthropogenic wastes, soils and bedrock-derived sediments to particulate nitrogen and particulate organic carbon in the Danshuei River during the flood caused by Typhoon Bilis in August 2000. The model solutions have been expressed in a general form that allows applications to mixtures with other types of isotopic compositions and elemental ratios or in forms other than suspended particulate matter.
A novel macro-model for spin-transfer-torque based magnetic-tunnel-junction elements
Lee, Seungyeon; Lee, Hyunjoo; Kim, Sojeong; Lee, Seungjun; Shin, Hyungsoon
2010-04-01
Spin-transfer-torque (STT) switching in magnetic-tunnel-junction (MTJ) has important merits over the conventional field induced magnetic switching (FIMS) MRAM in avoiding half-select problem, and improving scalability and selectivity. Design of MRAM circuitry using STT-based MTJ elements requires an accurate circuit model which exactly emulates the characteristics of an MTJ in a circuit simulator such as HSPICE. This work presents a novel macro-model that fully emulates the important characteristics of STT-based MTJ. The macro-model is realized as a three terminal sub-circuit that reproduces asymmetric resistance versus current (R-I) characteristics and temperature dependence of R-I hysteresis of STT-based MTJ element.
A Finite Element Model for Mechanical Analysis of LHC Main Dipole Magnet Coils
Pojer, Mirko; Scandale, Walter
2007-01-01
After years of studies and observations, the mechanical stability of the LHC main dipole magnets still remains an open issue. The robustness of these magnets has already been asserted and their reliability in operation is not far from being proven. However, anomalous mechanical behaviors sometimes observed are not yet completely understood. A finite element model, which has been recently developed at CERN, aims at providing an instrument for better explaining these anomalies. Cable modeling and contact between elements, friction and mechanical hysteresis are the key features of this model. The simulation of the hysteresis experienced by the coil during collaring, presented here, is the starting point for the representation of the whole life cycle of the dipole coil.