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Sample records for striped seabream lithognathus

  1. Age, growth, mortality, reproduction and feeding habits of the striped seabream, Lithognathus mormyrus (Pisces: Sparidae in the coastal waters of the Thracian Sea, Greece

    Directory of Open Access Journals (Sweden)

    Argyris Kallianiotis

    2005-09-01

    Full Text Available Age, growth, mortality, reproduction and feeding habits were analysed for Lithognathus mormyrus collected in the coastal waters of the Thracian Sea from November 1997 to September 1999. Specimens ranged from 42 to 341 mm in total length. Weight increased with size allometrically (b = 3.242 for immature individuals and isometrically (b = 2.960 for males, females and intersexuals. Growth was described by the standard form of the von Bertalanffy growth equation and the estimated parameters were k = 0.21, t0 = –0.996 and L? = 309.4. Total and natural instantaneous rate of mortality was found to be Z = 0.79 year-1 and M = 0.61 year-1. Sex inversion occurred mainly between 210 and 300 mm (4-9 age classes. Males reached sexual maturity at 162.1 mm (2.5 years and females at 190.40 mm (3.6 years. The spawning period occurred from May to September, while the gamete emission peaked in June-August. Stomach content analysis revealed that L. mormyrus is a carnivorous species feeding on benthic invertebrates, mainly polychaeta and bivalve molluscs. Ontogenetic variation in the diet composition showed that while growing, the fish become more generalist feeders. We also found that in the summer season the fish become more selective feeders.

  2. A method to determine size-specific natural mortality applied to westcoast steenbras ( Lithognathus aureti ) in Namibia

    DEFF Research Database (Denmark)

    Beyer, Jan; Kirchner, C.H.; Holtzhausen, J.A.

    1999-01-01

    in stocks that are close to a virgin state. Size-specific natural mortality rates of westcoast steenbras (Lithognathus aureti) were determined by using length frequencies of rod-caught fish from a lightly exploited and closed population at Meob Bay, Namibia. It was assumed that natural mortality...... to estimate fundamental mortality-to-growth ratio (M-infinity/K) without any prior knowledge on growth. The application of M-infinity for steenbras to obtain size-specific natural mortality rate for silver kob (Argyrosomus inodorus), as an input parameter for virtual population analysis, is also proposed. (C......In traditional single-species fish stock assessment natural mortality is considered constant, independent of age or size. It is argued that predation mortality is generally related to prey size, that it decreases with increasing size and that such size-specific signals can best be detected...

  3. Characterization of the peripheral thyroid system of gilthead seabream acclimated to different ambient salinities.

    NARCIS (Netherlands)

    Ruiz-Jarabo, I.; Klaren, P.H.M.; Louro, B.; Martos-Sitcha, J.A.; Pinto, P.I.; Vargas-Chacoff, L.; Flik, G.; Martinez-Rodriguez, G.; Power, D.M.; Mancera, J.M.; Arjona, F.J

    2016-01-01

    Thyroid hormones are involved in many developmental and physiological processes, including osmoregulation. The regulation of the thyroid system by environmental salinity in the euryhaline gilthead seabream (Sparus aurata) is still poorly characterized. To this end seabreams were exposed to four

  4. Characterization of the peripheral thyroid system of gilthead seabream acclimated to different ambient salinities.

    NARCIS (Netherlands)

    Ruiz-Jarabo, I.; Klaren, P.H.M.; Louro, B.; Martos-Sitcha, J.A.; Pinto, P.I.; Vargas-Chacoff, L.; Flik, G.; Martinez-Rodriguez, G.; Power, D.M.; Mancera, J.M.; Arjona, F.J.

    2017-01-01

    Thyroid hormones are involved in many developmental and physiological processes, including osmoregulation. The regulation of the thyroid system by environmental salinity in the euryhaline gilthead seabream (Sparus aurata) is still poorly characterized. To this end seabreams were exposed to four

  5. Evaluation of rumble stripes.

    Science.gov (United States)

    2010-01-01

    The objective of this study were to: a) monitor the initial installations of rumble stripes and b) evaluate the results of rumble stripe installations. : Ten rural, two-lane road locations were selected by the Kentucky Transportation Cabinet across t...

  6. Dietary Tools To Modulate Glycogen Storage in Gilthead Seabream Muscle: Glycerol Supplementation

    DEFF Research Database (Denmark)

    Silva, Tomé S.; Matos, Elisabete; Cordeiro, Odete D.

    2012-01-01

    seabream. Two diets were tested in duplicate (n = 42/tank). Results show 5% inclusion of crude glycerol in gilthead seabream diets induces increased muscle glycogen, ATP levels and firmness, with no deleterious effects in terms of growth, proximate composition, fatty acid profile, oxidative state...

  7. Wheat Stripe Rust

    OpenAIRE

    Pace, Mike; Israelsen, Clark; Evans, Kent; Barnhill, James

    2008-01-01

    Stripe rust, or yellow rust, is primarily a foliar fungal disease of wheat, although it can infect spike and stem tissues. If the pathogen infects the spike (head) it causes extensive quality and grain yield loss. The disease is caused by the fungus Puccinia striiformis f. sp. tritici. The fungus can only survive and reproduce on wheat. It survives from one season to the next on volunteer plants.

  8. Lighting up superconducting stripes

    Science.gov (United States)

    Ergeçen, Emre; Gedik, Nuh

    2018-02-01

    Cuprate superconductors display a plethora of complex phases as a function of temperature and carrier concentration, the understanding of which could provide clues into the mechanism of superconductivity. For example, when about one-eighth of the conduction electrons are removed from the copper oxygen planes in cuprates such as La2‑xBaxCuO4 (LBCO), the doped holes (missing electrons) organize into one-dimensional stripes (1). The bulk superconducting transition temperature (Tc) is greatly reduced, and just above Tc, electrical transport perpendicular to the planes (along the c axis) becomes resistive, but parallel to the copper oxygen planes, resistivity remains zero for a range of temperatures (2). It was proposed a decade ago (3) that this anisotropic behavior is caused by pair density waves (PDWs); superconducting Cooper pairs exist along the stripes within the planes but cannot tunnel to the adjacent layers. On page 575 of this issue, Rajasekaran et al. (4) now report detection of this state in LBCO using nonlinear reflection of high-intensity terahertz (THz) light.

  9. Exploding Stars and Stripes

    Science.gov (United States)

    2011-03-01

    The discovery of a pattern of X-ray "stripes" in the remains of an exploded star may provide the first direct evidence that a cosmic event can accelerate particles to energies a hundred times higher than achieved by the most powerful particle accelerator on Earth. This result comes from a very long observation of the Tycho supernova remnant with NASA's Chandra X-ray Observatory. It could explain how some of the extremely energetic particles bombarding the Earth, called cosmic rays, are produced. "We've seen lots of intriguing structures in supernova remnants, but we've never seen stripes before," said Kristoffer Eriksen, a postdoctoral researcher at Rutgers University who led the study. "This made us think very hard about what's happening in the blast wave of this powerful explosion." This latest study from Chandra provides support for a theory about how magnetic fields can be dramatically amplified in such blast waves. In this theory, the magnetic fields become highly tangled and the motions of the particles very turbulent near the expanding supernova shock wave at the front edge of the supernova remnant. High-energy charged particles can bounce back and forth across the shock wave repeatedly, gaining energy with each crossing. Theoretical models of the motion of the most energetic particles -- which are mostly protons -- are predicted to leave a messy network of holes and dense walls corresponding to weak and strong regions of magnetic fields, respectively. The X-ray stripes discovered by the Chandra researchers are thought to be regions where the turbulence is greater and the magnetic fields more tangled than surrounding areas, and may be the walls predicted by the theory. Electrons become trapped in these regions and emit X-rays as they spiral around the magnetic field lines. However, the regular and almost periodic pattern of the X-ray stripes was not predicted by the theory. "It was a big surprise to find such a neatly arranged set of stripes," said co

  10. QTL affecting morphometric traits and stress response in the gilthead seabream (Sparus aurata).

    NARCIS (Netherlands)

    Boulton, G.S.; Massault, C.; Ross, D.J.; Koning, de D.J.; Haley, C.S.; Bovenhuis, H.; Batargias, C.; Canario, A.; Kotoulas, G.; Tsigenopoulos, C.S.

    2011-01-01

    incipient selective breeding programme. This study, which examined the genetic architecture of seabream morphology and stress response to confinement, takes a step toward the use of marker assisted selection in this species. Major loci affecting these traits were mapped, using data from 460

  11. Do dietary amino acid profiles affect performance of larval gilthead seabream?

    OpenAIRE

    Aragão, C.; Conceição, L. E. C.; Lacuisse, M.; Yúfera, M.; Dinis, Maria Teresa

    2007-01-01

    Live preys commonly used in fish larval rearing seem to be imbalanced in terms of amino acids. Manipulation of their amino acid composition is di fficult, but the use of microencapsulated diets allows this manipulation. This study analysed the effect of amino acid supplementation, in order to compensate for dietary amino acid imbalances, on growth and survival of gilthead seabream ( Sparus aurata ) larvae.

  12. Mating behaviour and gamete release in gilthead seabream (Sparus aurata, Linnaeus 1758) held in captivity

    Energy Technology Data Exchange (ETDEWEB)

    Ibarra-Zatarain, Z.; Duncan, N.

    2015-07-01

    The present study aimed to describe the reproductive behaviour of gilthead seabream (Sparus aurata) in captivity. Twenty-four mature gilthead seabream, divided in two tanks, were utilized for the present study. Reproductive behaviour was recorded using submersibles cameras. A total of 67 spawning events were analysed. The mean duration time that gilthead seabream spent spawning was 54 ± 4 min/day, during which mean number of individual spawning events was 5.6 ± 0.2. The mean volume of eggs produced by both broodstocks was 405 ± 13.4 mL with a fertilization rate of 91.6 ± 0.4%. The reproductive behaviour began with a schooling behaviour and then forming light aggregations. From an aggregation or an encounter while swimming freely a female initiated a spawning rush followed by one or more males to gametes liberation. The spawning rush was brief, 1.6 ± 0.5 sec, over an approximately 1.7 ± 0.2 m distance from the tank bottom to the water surface. Pair spawning, between a single female and male, was the most common (71.6%). Group spawning was less common and involved a single female spawning with two males (22.5%) or three males (4.9%). Spawning rushes involving more than one female were not observed. Gilthead seabream in the present study presented a tendency to pair spawn and eggs collected as a “spawn” were actually the sum of many separate spawning events over a short time period. This is the first description of gilthead seabream spawning and the findings help to understand microsatellite based observations of spawning kinetics. (Author)

  13. Immunotoxicological effects of inorganic arsenic on gilthead seabream (Sparus aurata L.)

    Energy Technology Data Exchange (ETDEWEB)

    Guardiola, F.A.; Gónzalez-Párraga, M.P.; Cuesta, A. [Department of Cell Biology and Histology, Faculty of Biology, Campus Regional de Excelencia Internacional “Campus Mare Nostrum”, University of Murcia, 30100 Murcia (Spain); Meseguer, J. [Department of Cell Biology and Histology, Faculty of Biology, Campus Regional de Excelencia Internacional “Campus Mare Nostrum”, University of Murcia, 30100 Murcia (Spain); Department of Agricultural Chemistry, Geology and Pedology, Faculty of Chemistry, Campus Regional de Excelencia Internacional “Campus Mare Nostrum”, University of Murcia, 30100 Murcia (Spain); Martínez, S.; Martínez-Sánchez, M.J.; Pérez-Sirvent, C. [Department of Agricultural Chemistry, Geology and Pedology, Faculty of Chemistry, Campus Regional de Excelencia Internacional “Campus Mare Nostrum”, University of Murcia, 30100 Murcia (Spain); Esteban, M.A., E-mail: aesteban@um.es [Department of Cell Biology and Histology, Faculty of Biology, Campus Regional de Excelencia Internacional “Campus Mare Nostrum”, University of Murcia, 30100 Murcia (Spain)

    2013-06-15

    Highlights: •Short exposure to arsenic increases the hepato-somatic index and produces histopathological alterations in the liver. •Arsenic is bioaccumulated in the liver of gilthead seabream but no in the muscle. •Arsenic-exposure affects the innate immune system in the gilthead seabream. •Ten days of exposure to As enhances the immune parameters. -- Abstract: Arsenic (As) has been associated with multitude of animal and human health problems; however, its impact on host immune system has not been extensively investigated. In fish, there are very few works on the potential risks or problems associated to the presence of arsenic. In the present study we have evaluated the effects of exposure (30 days) to sub-lethal concentrations of arsenic (5 μM As{sub 2}O{sub 3}) in the teleost fish gilthead seabream (Sparus aurata), with special emphasis in the innate immune response. The arsenic concentration was determined using atomic fluorescence spectrometry (AFS) in liver and muscle of exposed fish showing As accumulation in the liver after 30 days of exposure. The hepatosomatic index was increased at significant extent after 10 days but returned to control values after 30 days of exposure. Histological alterations in the liver were observed including hypertrophy, vacuolization and cell-death processes. Focusing on the immunological response, the humoral immune parameters (seric IgM, complement and peroxidase activities) were no affected to a statistically significant extent. Regarding the cellular innate parameters, head-kidney leucocyte peroxidase, respiratory burst and phagocytic activities were significantly increased after 10 days of exposition compared to the control fish. Overall, As-exposure in the seabream affects the immune system. How this might interfere with fish biology, aquaculture management or human consumers warrants further investigations. This paper describes, for the first time, the immunotoxicological effects of arsenic exposure in the

  14. The Stripe State in Cupratesa

    Directory of Open Access Journals (Sweden)

    Lee T.-K.

    2012-03-01

    Full Text Available Since the discovery of high temperature superconductors (HTS two decades ago, many anomalous properties have been reported. One of the most interesting properties is the possible existence of the stripe state consisting of one dimensional charge-density modulation coupled with some kind of spin ordering. X-ray and neutron scattering experiments and recently high resolution scanning tunneling microscopy have reported direct evidences of such a structure. In particular it has found in the La-Sr-Cu-O (LSCO family the existence of the half-doped stripe with average of half a hole in one charge modulation period below and about 1/8 hole density. These results have fueled the idea about the presence of these charge or spin density wave states competing with the superconducting phase in underdoped HTS. They may even contribute to the pairing mechanism. In this talk, we will demonstrate that the presence of these stripes is actually a natural consequence of the strongly interacting t-J model by using a variational approach which provides a good enough accuracy to address the subtle result. Furthermore we show that half-doped stripes could be stabilized in hole-doped systems if we assume a simple electron-phonon interaction to renormalize the electron mass. However we have not found any evidence to support half-doped stripes in electron-doped systems.

  15. Improving striping operations through system optimization.

    Science.gov (United States)

    2015-09-01

    Striping operations generate a significant workload for Missouri Department of Transportation (MoDOT) maintenance : operations. The requirement for each striping crew to replenish its stock of paint and other consumable items from a bulk storage : fa...

  16. Genetic stock structure of white steenbras Lithognathus lithognathus ...

    African Journals Online (AJOL)

    To address this, mitochondrial DNA sequencing and genotyping of microsatellite loci in the nuclear genome were conducted to determine the genetic stock structure and level of gene flow in this species. Genetic diversity was high throughout the species' core distribution, with no evidence of isolation by way of distance or ...

  17. Age-dependent QTL affecting body weight in gilthead seabream (Sparus aurata L.

    Directory of Open Access Journals (Sweden)

    D. LOUKOVITIS

    2016-09-01

    Full Text Available We examined 24 maternal half-sib families of gilthead seabream to identify quantitative trait loci (QTL associated with body weight at four time points during a production cycle. 57 brooders and 637 offspring were genotyped for 14 informative microsatellite markers, spanning linkage groups 1 and 21. The QTL detection method was based on half-sib interval mapping analysis through a linear regression approach. One QTL was found significant at all time points in linkage group 1, with its effect having different profile across time, and one QTL in linkage group 21 that seems to impact body weight at a later growth stage of the species. Current results verified previously published QTL for growth in the above linkage groups, using a different genetic background of seabream. These QTL can be considered as valuable candidates for use in marker-assisted selective breeding programs, aiming at high rates of genetic improvement for growth in S. aurata.

  18. Effects of inulin on gilthead seabream (Sparus aurata L.) innate immune parameters.

    Science.gov (United States)

    Cerezuela, Rebeca; Cuesta, Alberto; Meseguer, José; Angeles Esteban, M

    2008-05-01

    Inulin, a fructooligossacharide, is a prebiotic that plays an important role in the immune function in mammals, but it has never been assayed in other vertebrate groups. Thus, we have studied the inulin effects on the gilthead seabream (Sparus aurata L.) innate immune response both in vitro and in vivo. For the in vitro study, head-kidney leucocytes were incubated with inulin (ranging from 0 to 1000 microg ml(-1)) for 30, 90, 180 and 300 min and 24h and any effect was observed on leucocyte viability or the main innate cellular immune responses (leucocyte peroxidase, phagocytic, respiratory burst and natural cytotoxic activities). For the in vivo study, seabream specimens were fed for 1 or 2 weeks with a commercial diet supplemented with inulin: 0 (control), 5 or 10 g inulin kg(-1) diet (0.5 and 1%, respectively). Inulin produced a significant inhibition in phagocytosis and respiratory burst in leucocytes from specimens fed diets containing 0.5% or 1% of inulin for 1 week. Based on the present results, inulin does not seem to be a good immunostimulant for seabream, though its effects in other species and combined with other immunostimulans (i.e. probiotics) might be of great interest.

  19. Metabolic fingerprinting of gilthead seabream (Sparus aurata liver to track interactions between dietary factors and seasonal temperature variations

    Directory of Open Access Journals (Sweden)

    Tomé S. Silva

    2014-08-01

    Full Text Available Farmed gilthead seabream is sometimes affected by a metabolic syndrome, known as the “winter disease”, which has a significant economic impact in the Mediterranean region. It is caused, among other factors, by the thermal variations that occur during colder months and there are signs that an improved nutritional status can mitigate the effects of this thermal stress. For this reason, a trial was undertaken where we assessed the effect of two different diets on gilthead seabream physiology and nutritional state, through metabolic fingerprinting of hepatic tissue. For this trial, four groups of 25 adult gilthead seabream were reared for 8 months, being fed either with a control diet (CTRL, low-cost commercial formulation or with a diet called “Winter Feed” (WF, high-cost improved formulation. Fish were sampled at two time-points (at the end of winter and at the end of spring, with liver tissue being taken for FT-IR spectroscopy. Results have shown that seasonal temperature variations constitute a metabolic challenge for gilthead seabream, with hepatic carbohydrate stores being consumed over the course of the inter-sampling period. Regarding the WF diet, results point towards a positive effect in terms of performance and improved nutritional status. This diet seems to have a mitigating effect on the deleterious impact of thermal shifts, confirming the hypothesis that nutritional factors can affect the capacity of gilthead seabream to cope with seasonal thermal variations and possibly contribute to prevent the onset of “winter disease”.

  20. LAJU RESPIRASI INDUK IKAN BLACKHEAD SEABREAM Acanthopagrus schlegelii PADA SUHU PEMELIHARAAN YANG BERBEDA

    Directory of Open Access Journals (Sweden)

    Vitas Atmadi Prakoso

    2017-10-01

    Full Text Available Laju respirasi hewan akuatik memiliki hubungan yang erat dengan metabolisme. Tingkat metabolisme hewan merupakan variabel yang dapat dipengaruhi faktor dalam maupun luar, salah satunya adalah suhu. Pada ikan, proses metabolisme juga berkorelasi dengan suhu. Salah satu jenis ikan yang perlu dikaji laju respirasinya adalah ikan blackhead seabream Acanthopagrus schlegelii yang merupakan spesies ikan laut yang popular di Korea Selatan, sehingga diperlukan lebih banyak informasi lagi mengenai laju respirasi ikan ini untuk mengoptimalkan metabolisme ikan ini dan berdampak kepada produktivitas budidaya. Penelitian ini bertujuan untuk mengevaluasi laju respirasi induk ikan blackhead seabream pada beberapa tingkatan suhu. Ikan blackhead seabream (panjang total 29,3 ± 2,2 cm dan bobot tubuh 538,3 ± 43,0 g diteliti menggunakan respirometer dalam sistem resirkulasi. Tiga kelompok percobaan dilakukan untuk mengukur laju respirasi berdasarkan perubahan suhu pemeliharaan (15°C, 20°C, dan 25°C. Hasil penelitian menunjukkan bahwa kecenderungan laju respirasi meningkat secara linier dengan peningkatan suhu perlakuan, dengan nilai tertinggi sebesar 164,8 ± 30,7 mg O2/kg/jam pada 25°C dan nilai terendah sebesar 72,4 ± 8,1 mg O2/kg/jam pada 15°C. Sementara itu, frekuensi pernapasan berkorelasi positif terhadap kenaikan suhu. Berdasarkan penelitian ini, dapat disimpulkan bahwa perubahan suhu dari 15°C ke 25°C menyebabkan peningkatan laju respirasi pada induk ikan blackhead seabream. It is well known that a close relationship exists between respiration rate and metabolism in aquatic animal. In fish, the metabolic rate is influenced by internal or external factors, such as temperature. This research observed the respiration rate of blackhead seabream, Acanthopagrus schlegelii, which is one of the popular marine fish species in South Korea. Despite the fish popularity, very few information are available about the fish’s respiration rate which is important

  1. Invasion of the striped mollusks

    International Nuclear Information System (INIS)

    Anon.

    1992-01-01

    Introduced to this country only five years ago, the prolific zebra mussel has infested the Great Lakes and has already begun to move into fresh waters beyond the region. Dense populations in utility water systems have caused serious problems, reducing plant efficiency and blocking lines used for cooling and fire fighting. Experts say the striped mollusk has the potential to become the industry's worst biological problem, possibly affecting 70% of US power plants. While it appears that the invader is here to stay, EPRI and others continue to develop and refine techniques to control mussel growth

  2. Shelf-life extension of gilthead seabream fillets by osmotic treatment and antimicrobial agents.

    Science.gov (United States)

    Tsironi, T N; Taoukis, P S

    2012-02-01

    The objectives of the study were to evaluate the effect of selected antimicrobial agents on the shelf life of osmotically pretreated gilthead seabream and to establish reliable kinetic equations for shelf-life determination validated in dynamic conditions. Fresh gilthead seabream (Sparus aurata) fillets were osmotically treated with 50% high dextrose equivalent maltodextrin (HDM, DE 47) plus 5% NaCl and 0·5% carvacrol, 0·5% glucono-δ-lactone or 1% Citrox (commercial antimicrobial mix). Untreated and treated slices were aerobically packed and stored isothermally (0-15°C). Microbial growth and quality-related chemical indices were modelled as functions of temperature. Models were validated at dynamic storage conditions. Osmotic pretreatment with the use of antimicrobials led to significant shelf-life extension of fillets, in terms of microbial growth and organoleptic deterioration. The shelf life was 7 days for control samples at 5°C. The osmotic pretreatment with carvacrol, glucono-δ-lactone and Citrox allowed for shelf-life extension by 8, 10 and 5 days at 5°C, respectively. The results of the study show the potential of adding carvacrol, glucono-δ-lactone or Citrox in the osmotic solution to extend the shelf life and improve commercial value of chilled osmotically pretreated fish products. The developed models can be a reliable tool for predicting the shelf life of fresh or minimally processed gilthead seabream fillets in the real chill chain. © 2012 The Authors. Journal of Applied Microbiology © 2012 The Society for Applied Microbiology.

  3. On the record of Red seabream Pagrus major (Temminck and Schlegel,1843 (Osteichthyes: Sparidae in the Adriatic Sea

    Directory of Open Access Journals (Sweden)

    Jakov Dulcic

    2007-03-01

    Full Text Available One specimen of red seabream Pagrus major, 44.9 cm total length, was caught in the eastern middle Adriatic (Island Molat, Cape Bonaster by long-line hook at a depth of about 20 m on a hard rocky bottom on 25 September 2004. It is the first record of this species in the Adriatic Sea and Mediterranean area.

  4. Growth and reproduction of the gilthead seabream Sparus aurata in Mellah lagoon (north-eastern Algeria

    Directory of Open Access Journals (Sweden)

    Lamya Chaoui

    2006-09-01

    Full Text Available Gilthead seabream Sparus aurata (L., a protandrous hermaphrodite, was caught in Mellah lagoon (Algeria from July 1997 to June 1998. Its age, growth and reproduction were studied. Fish ranged in size from 157 to 610 mm total length and weighed from 60 to 4000 g wet weight. There were fish aged 1+ to 7+ years old in the samples. Direct scale readings were made by counting the number of rings. These were compared with the data obtained by backcalculating the lengths at different ages. These two methods were in agreement and showed that the growth rate of gilthead seabream in Mellah lagoon is very high compared to other study areas. The growth parameters of the Von Bertalanffy equation were: L∞ = 55.33 cm, K = 0.513, t0 = - 0.282, with F’ = 7.359. The fitted length-weight relationship was W = 1.292. 10-2 L3.06. The reproductive season extended from October to January, with a peak in December. Sex inversion occurred at a total length of 44 cm. Sexual maturity was reached at 32.6 cm total length.

  5. Invasion of the striped mollusks

    Energy Technology Data Exchange (ETDEWEB)

    1991-09-01

    Introduced to this country only five years ago, the prolific zebra mussel has infested the Great Lakes and has already begun to move into fresh waters beyond the region. Dense populations in utility water systems have caused serious problems, reducing plant efficiency and blocking lines used for cooling and fire fighting. Experts say the striped mollusk has the potential to become the industry's worst biological problem, possibly affecting 70% of US power plants. While it appears that the invader is here to stay, EPRI and others continue to develop and refine techniques to control mussel growth. This article describes how the mollusk got here, reviews the problems it can cause and what is being done to mitigate the problems and control the growth and spread of the mollusk.

  6. Histamine and mast cell activator compound 48/80 are safe but inefficient systemic adjuvants for gilthead seabream vaccination.

    Science.gov (United States)

    Gómez González, N E; Cabas, I; Montero, J; García Alcázar, A; Mulero, V; García Ayala, A

    2017-07-01

    Histamine has a key role in the regulation of inflammatory and innate immune responses in vertebrates. Gilthead seabream (Sparus aurata L.), a marine hermaphrodite teleost of great commercial value, was the first fish species shown to possess histamine-containing mast cells (MCs) at mucosal tissues. MCs are highly abundant in the peritoneal exudate of gilthead seabream and compound 48/80 (Co 48/80), often used to promote MC activation and histamine release, is able to promote histamine release from gilthead seabream MCs in vitro and in vivo. The aim of the present study was to analyze the effect of histamine and Co 48/80 on the immune responses of gilthead seabream. For this purpose, histamine and Co 48/80 were intraperitoneally injected alone or combined with 10 9 heat-killed Vibrio anguillarum cells and their effects on head kidney and peritoneal exudate were analyzed. The results indicated that although histamine and Co 48/80 were both able to alter the percentage of peritoneal exudate and head kidney immune cell types, only Co 48/80 increased reactive oxygen species production by peritoneal leukocytes. In addition, histamine, but not Co 48/80, was able to slightly impair the humoral adaptive immune response, i.e. production of specific IgM to V. anguillarum. Notably, both histamine and Co 48/80 reduced the expression of the gene encoding histamine receptor H2 in peritoneal exudate leukocytes. These results show for the first time in fish that although systemic administration of histamine and Co 48/80 is safe, neither compound can be regarded as an efficient adjuvant for gilthead seabream vaccination. Copyright © 2017 Elsevier Ltd. All rights reserved.

  7. Stock characteristics of Hudson River striped bass

    International Nuclear Information System (INIS)

    Hoff, T.B.; McLaren, J.B.; Cooper, J.C.

    1988-01-01

    Striped bass, because of their tremendous popularity both commercially and recreationally, were a principal focus of the Hudson River power plant case. Between 1976 and 1979, over 23,000 age-II and older striped bass were studied as one facet of an extensive research program on the spring population in the Hudson River. Samples were collected from the overwintering as well as the spawning portion of the striped bass population, and included immature as well as mature fish. At least 12 age-groups contributed to spawning each year. Of these 12, age-groups III, IV, and V usually were most abundant, but the percentage of the population represented by any single age-group varied as the result of fluctuations in year-class strength. Males first became sexually mature at age II and females at age IV. Fast-growing individuals within a year class tended to mature earlier. Fecundity increased with the size of fish, reaching an observed maximum of about 3 million eggs per female. Although significant annual variations in maturity and growth were detected for Hudson River striped bass, there was no evidence of a consistent change in either variable that might be associated with increasing power plant operations and a reduction in striped bass abundance. Age at maturity and age structure are the two life history components that differ the most between the Hudson River population and other striped bass populations. 36 refs., 7 tabs

  8. The effects of swimming pattern on the energy use of gilthead seabream (Sparus aurata L.)

    DEFF Research Database (Denmark)

    Steinhausen, Maria Faldborg; Steffensen, John Fleng; Andersen, Niels Gerner

    2010-01-01

    Oxygen consumption ( ) was measured for gilthead seabream (Sparus aurata) during spontaneous and forced activities. During spontaneous activity, the swimming pattern was analysed for the effect on   on the average speed (U), turning rate (¿) and change in speed (¿U). All swimming characteristics...... and   during forced activity was also established. During spontaneous activity, 2.5 times more energy was used than in forced swimming at a speed of 0.5 BL s-1. This indicates that spontaneous swimming costs may be considerably higher compared with those of a fixed swimming speed. However, comparing...... contributed significantly to the source of spontaneous swimming costs, and the models explained up to 58% of the variation in   Prediction of   of fish in field studies can thereby be improved if changes in speed and direction are determined in addition to swimming speed. A relationship between swimming speed...

  9. METHODS OF OBTAINING LONGITUDINAL STRIPES LAYOUTS

    Directory of Open Access Journals (Sweden)

    OANA Dorina

    2014-05-01

    Full Text Available From the technological point of view it is necessary that the phase of warping to be done two or three multiple warp, which results in two or three rolls of the warp final will meet only the warping. To achieve longitudinal striped fabric spinning machines is necessary to have all tensioning mechanism dispensing rolls which requires their special construction. The homogeneity of the fabric from the point of view of the warp yarns tension must be ensured by synchronizing operation of the tensioning two cutting mechanisms of the two reels on which the wires are wound with a degree of waving and thus the fuel consumption at the different weaving. It is recommended that the design be adopted average float bonds, such that the wires can be wrapped around more than two final reels. In terms of manufacturing technology with longitudinal stripes fabrics have a more complicated and expensive technology to cross-striped fabrics for the manufacture of which technology is simplified. Cross-striped fabrics containing groups of warp threads those linked to floating average is materially different. Due to this degree of crimping of wires in the stripes with different bonds makes their contract to be different, having a direct influence on the wires consumption. The different contraction of wire weaving makes warp yarn length, contained in a linked reports are so different that it requires winding wires with different bonds also differing on the final rolls.

  10. Bioinspired Heterogeneous Structural Color Stripes from Capillaries.

    Science.gov (United States)

    Zhao, Ze; Wang, Huan; Shang, Luoran; Yu, Yunru; Fu, Fanfan; Zhao, Yuanjin; Gu, Zhongze

    2017-12-01

    As an important characteristic of many creatures, structural colors play a crucial role in the survival of organisms. Inspired by these features, an intelligent structural color material with a heterogeneous striped pattern and stimuli-responsivity by fast self-assembly of colloidal nanoparticles in capillaries with a certain diameter range are presented here. The width, spacing, color, and even combination of the structural color stripe patterns can be precisely tailored by adjusting the self-assembly parameters. Attractively, with the integration of a near-infrared (NIR) light responsive graphene hydrogel into the structural color stripe pattern, the materials are endowed with light-controlled reversible bending behavior with self-reporting color indication. It is demonstrated that the striped structural color materials can be used as NIR-light-triggered dynamic barcode labels for the anti-counterfeiting of different products. These features of the bioinspired structural color stripe pattern materials indicate their potential values for mimicking structural color organisms, which will find important applications in constructing intelligent sensors, anti-counterfeiting devices, and so on. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. Guiding thermomagnetic avalanches with soft magnetic stripes

    Energy Technology Data Exchange (ETDEWEB)

    Vlasko-Vlasov, V. K.; Colauto, F.; Benseman, T.; Rosenmann, D.; Kwok, W. -K.

    2017-12-01

    We demonstrate the potential for manipulating the ultrafast dynamics of thermomagnetic flux avalanches (TMA) in superconducting films with soft magnetic stripes deposited on the film. By tuning the in-plane magnetization of the stripes, we induce lines of strong magnetic potentials for Abrikosov vortices, resulting in guided slow motion of vortices along the stripe edges and preferential bursts of TMA along the stripes. Furthermore, we show that transversely polarized stripes can reduce the TMA size by diverting magnetic flux away from the major trunk of the TMA into interstripe gaps. Our data indicate that TMAs are launched from locations with enhanced vortex entry barrier, where flux accumulation followed by accelerated vortex discharge significantly reduces the threshold of the applied field ramping speed required for the creation of TMAs. Finally, vortex-antivortex annihilation at the moving front of an expanding TMA can account for the enhanced TMA activity in the receding branches of the sample's magnetization cycle and the preferred propagation of TMAs into maximum trapped flux regions.

  12. Differential proteome profile of skin mucus of gilthead seabream (Sparus aurata) after probiotic intake and/or overcrowding stress.

    Science.gov (United States)

    Cordero, Héctor; Morcillo, Patricia; Cuesta, Alberto; Brinchmann, Monica F; Esteban, María A

    2016-01-30

    Gilthead seabream (Sparus aurata L.) is the major cultured fish species in the Mediterranean area. High density stocking causes stress and increases the impact of diseases leading to economic losses. Probiotics could represent a solution to prevent diseases through several mechanisms such as improving the immune status and/or mucosal microbiota or competing with pathogens. The probiotic Shewanella putrefaciens, also known as Pdp11, was firstly isolated from the skin of healthy gilthead seabream. Our study focuses on the skin mucus proteome after dietary probiotic Pdp11 intake in fish maintained under normal or overcrowding conditions. 2-DE of skin mucus followed by LC-MS/MS analysis was done for each experimental group and differentially expressed proteins were identified. The results showed differentially expressed proteins especially involved in immune processes, such as lysozyme, complement C3, natural killer cell enhancing factor and nonspecific cytotoxic cell receptor protein 1, whose transcript profiles were studied by qPCR. A consistency between lysozyme protein levels in the mucus and lysozyme mRNA levels in skin was found. Further research is necessary to unravel the implications of skin mucosal immunity on fish welfare and disease. The present work reveals the proteomic changes, which are taking place in the skin mucus of stressed and non-stressed gilthead seabream after Pdp11 probiotic intake. The study contributes to improving the knowledge on skin mucosal immunology of this relevant farmed fish species. Furthermore, the paper shows for the first time how a suitable proteomic methodology, in this case 2-DE followed by LC-MS/MS is useful to perform a comparative study with a non-invasive technique of skin mucus of gilthead seabream. Copyright © 2015 Elsevier B.V. All rights reserved.

  13. Monospecies and multispecies probiotic formulations produce different systemic and local immunostimulatory effects in the gilthead seabream (Sparus aurata L.).

    Science.gov (United States)

    Salinas, Irene; Abelli, Luigi; Bertoni, Fabrizio; Picchietti, Simona; Roque, Ana; Furones, Dolors; Cuesta, Alberto; Meseguer, José; Esteban, Maria Angeles

    2008-07-01

    The effects of the oral administration of heat-inactivated Lactobacillus delbrüeckii ssp. lactis and Bacillus subtilis, individually or combined, on gilthead seabream immune responses were investigated both systemically and locally in the gut. In a first experiment, seabream (65 g) were fed for 3 weeks different diets supplemented with 1 x 10(7)CFU g(-1)Lactobacillus, 1 x 10(7)CFU g(-1)Bacillus, or 0.5 x 10(7)CFU g(-1)Lactobacillus plus 0.5 x 10(7)CFU g(-1)Bacillus. Controls were fed non-supplemented diet. Six fish per group were sampled at the end of the trial and some humoral and cellular systemic innate immune parameters were evaluated. Feeding the mixture of the two killed bacteria species significantly increased natural complement, serum peroxidase and phagocytic activities compared with controls. In a second experiment, juvenile seabream (13 g) were fed for 3 weeks the same experimental diets and total serum IgM and numbers of gut IgM(+) cells and acidophilic granulocytes were evaluated. All these parameters were significantly higher in the multispecies probiotic group compared to monospecies and control fed groups. The advantages provided by administration of killed probiotic bacteria as well as multispecies versus monospecies formulations are discussed in light of the results obtained and for their possible application in aquacultural practices.

  14. The IAC stripe82 legacy project

    Science.gov (United States)

    Román, Javier; Fliri, Juergen; Trujillo, Ignacio

    2017-03-01

    We present new deep co-adds of data taken within Stripe 82 of the Sloan Digital Sky Survey (SDSS), especially stacked to reach the faintest surface brightness limits of this data set. Our reduction puts special emphasis on preserving the characteristics of the background (sky + diffuse light) in the input images using a non-aggressive sky subtraction strategy, resulting in an exquisite quality on extremely faint structures. The IAC Stripe 82 co-adds offer a rather unique possibility to study the low surface brightness Universe like stellar haloes and disc truncations, low surface brightness, tidal galactic interactions, extremely faint dwarf galaxies, intra-cluster light or diffuse light from galactic dust. The imaging data is publicly available at http://www.iac.es/proyecto/stripe82/.

  15. Improving striping operations through system optimization - phase 2 : final report.

    Science.gov (United States)

    2016-07-01

    Striping operations generate a significant workload for MoDOT maintenance operations. The requirement for each striping crew : to replenish its stock of paint and other consumable items from a bulk storage facility, along with the necessity to make s...

  16. Probing optically silent superfluid stripes in cuprates

    Science.gov (United States)

    Rajasekaran, S.; Okamoto, J.; Mathey, L.; Fechner, M.; Thampy, V.; Gu, G. D.; Cavalleri, A.

    2018-02-01

    In many theoretical models of high-temperature superconductors, remnants of superconductivity persist to temperatures higher than the transition temperature, TC. Rajasekaran et al. used nonlinear terahertz spectroscopy to probe this region of the phase diagram of a cuprate superconductor that is well known for a stripe phase that appears for certain doping levels (see the Perspective by Ergeçen and Gedik). For a sample deep in the stripe phase, a large nonlinear signal persisted from the superconducting region up to temperatures much higher than TC. The findings suggest the formation of a peculiar spatially modulated superconducting state called the pair-density wave.

  17. DNA methylation profiles correlated to striped bass sperm fertility

    Science.gov (United States)

    Striped bass (Morone saxatilis) spermatozoa are used to fertilize in vitro the eggs of white bass (Morone chrysops) to produce the preferred hybrid for the striped bass aquaculture industry. Currently, only one source of domestic striped bass juveniles are available to growers that are not obtained ...

  18. substitution line for resistance to stripe rust

    Indian Academy of Sciences (India)

    2011-08-19

    Aug 19, 2011 ... c Indian Academy of Sciences. RESEARCH ARTICLE. Molecular cytogenetic characterization of a new wheat Secale africanum. 2R a. (2D) substitution line for resistance to stripe rust. MENGPING LEI, GUANGRONG LI, SUFEN ZHANG, CHENG LIU and ZUJUN YANG. ∗. School of Life Science and ...

  19. Breakup Behavior of a Capillary Bridge on a Hydrophobic Stripe Separating Two Hydrophilic Stripes

    Science.gov (United States)

    Hartmann, Maximilian; Hardt, Steffen

    2017-11-01

    The breakup dynamics of a capillary bridge on a hydrophobic area between two liquid filaments occupying two parallel hydrophilic stripes is studied experimentally. In addition calculations with the finite-element software Surface Evolver are performed to obtain the corresponding stable minimal surfaces. Droplets of de-ionized water are placed on substrates with alternating hydrophilic and hydrophobic stripes of different width. Their volume decreases by evaporation. This results in a droplet shaped as the letter ``H'' covering two hydrophilic stripes separated by one hydrophobic stripe. The width of the capillary bridge d(t) on the hydrophobic stripe during the breakup process is observed using a high-speed camera mounted on a bright-field microscope. The results of the experiments and the numerical studies show that the critical width dcrit, indicating the point where the capillary bridge becomes unstable, mainly depends on the width ratio of the hydrophilic and hydrophobic stripes. It is found that the time derivative of d(t) first decreases after dcrit has been reached. The final breakup dynamics then follows a t 2 / 3 scaling. We kindly acknowledge the financial support by the German Research Foundation (DFG) within the Collaborative Research Centre 1194 ``Interaction of Transport and Wetting Processes'', Project A02a.

  20. Life Cycle Assessment of Gilthead Seabream (Sparus aurata Production in Offshore Fish Farms

    Directory of Open Access Journals (Sweden)

    Benjamín García García

    2016-11-01

    Full Text Available Life cycle assessment is used in this study to evaluate the potential environmental impacts of producing gilthead seabream in an offshore sea farm exposed to storms in the Spanish Mediterranean Sea. The farming methods used can be considered as “basic” since no centralized or automatic food distribution system exists and there is no control system. This study aims to identify the main hotspots under these conditions and to propose and compare viable alternatives to them. Contribution analysis found that the component of the system with the greatest potential environmental impact (48% of the overall impact was fish feed, especially the raw material used. Other contributory factors were the fuel consumed by the vessels operating in the farm (35%, the dumping of N and P in the environment due to the metabolism of the fish (12%, the cages and their anchorage system (5%. A sensitivity analysis showed that a significant reduction in potential environmental impact can be achieved by increasing feeding efficiency. Feed formulation in raw materials is also an important factor and could serve to diminish overall adverse effects. A balance needs to be found between productive performance (growth, survival and feed conversion rate, feed price and its influence on production costs and the overall environmental consequences.

  1. Effects of Hypoxia on the Behaviour, Mortality and Plasma Electrolyte Concentrations of Goldlined Seabream, Rhabdosargus sarba

    Directory of Open Access Journals (Sweden)

    Hamed M. Al-Gheilani

    2008-01-01

    Full Text Available The behaviour, mortality rates and plasma electrolyte concentrations of goldlined seabream Rhabdosargus sarba challenged with low dissolved oxygen (DO conditions was studied in an experimental setup, comprising a control (7.9 ml/l DO and two hypoxic (2 ml/l and 1 ml/l DO treatments. Increased ventilation rates and decreased swimming activity were observed in hypoxic treatments, but some fish exhibited strenuous avoidance actions. No mortalities were observed after 3 h, 6 h, or 24 h, but 50% of males and 18% of females died in the 48 h treatment at 1 ml/l DO. The mean size of surviving fish (305± 32.1 g total weight was significantly smaller than those that died (425 ± 33.1 g. The plasma concentrations of Na+, Cl- and Mg2+ did not vary significantly relative to treatment, exposure time, fish size and gender, or interactions among treatment, time and gender. Ca2+ concentrations increased significantly after 48 h at 1 ml/l, but this result may be artificial because of the small sample size. The results suggest that R. sarba is comparatively tolerant of the low oxygen or hypoxic conditions that often occur in the coastal waters of Oman, where seasonal upwellings and  high primary productivity have in the past caused mass mortalities of demersal fishes.

  2. Quantitative trait loci for a neurocranium deformity, lack of operculum, in gilthead seabream (Sparus aurata L.).

    Science.gov (United States)

    Negrín-Báez, D; Navarro, A; Afonso, J M; Toro, M A; Zamorano, M J

    2016-04-01

    Lack of operculum, a neurocranial deformity, is the most common external abnormality to be found among industrially produced gilthead seabream (Sparus aurata L.), and this entails significant financial losses. This study conducts, for the first time in this species, a quantitative trait loci (QTL) analysis of the lack of operculum. A total of 142 individuals from a paternal half-sibling family (six full-sibling families) were selected for QTL mapping. They had previously shown a highly significant association with the prevalence of lack of operculum in a segregation analysis. All the fish were genotyped for 106 microsatellite markers using a set of multiplex PCRs (ReMsa1-ReMsa13). A linear regression methodology was used for the QTL analysis. Four QTL were detected for this deformity, two of which (QTLOP1 and QTLOP2) were significant. They were located at LG (linkage group) nine and LG10 respectively. Both QTL showed a large effect (about 27%), and furthermore, the association between lack of operculum and sire allelic segregation observed was statistically significant in the QTLOP1 analysis. These results represent a significant step towards including marker-assisted selection for this deformity in genetic breeding programmes to reduce the incidence of the deformity in the species. © 2016 Stichting International Foundation for Animal Genetics.

  3. The Effect of Phenanthrene on Some Hematological Indices Yellowfin Seabream (Acanthopagrus Latus

    Directory of Open Access Journals (Sweden)

    Mehrnaz Shirmohammadi

    2018-01-01

    Full Text Available Background: We examined the effects of phenanthrene (Phe on hematological parameters of yellowfin seabream (Acanthopagrus latus. Methods: The research was carried out in Jan 2016 at Khorramshahr University of Marine Science and Technology, Khorramshahr, Iran. Fish were injected with different concentrations (0, 2, 20 and 40 mg/kg of Phe and blood, samples were taken from fish 1, 4, 7 and 14 d after injection. Results: Results of Phe-treated fish showed a decrease in red blood cell and white blood cell counts, hematocrit amount after 4 d and in hemoglobin concentration after 7 d (P<0.05. Mean corpuscular hemoglobin concentration was enhanced in fish exposed to Phe up to day 4 (P<0.05. Phe-exposed fish showed an increase in the percentage of neutrophils with a decrease in the percentage of lymphocytes (P<0.05 and did not represent any effects on percentage of monocytes and eosinophils, mean corpuscular volume and mean corpuscular hemoglobin concentration. Conclusion: Changes in hematological parameters after exposure to Phe result in a decrease of non-specific immunity.

  4. STRIPE: Remote Driving Using Limited Image Data

    Science.gov (United States)

    Kay, Jennifer S.

    1997-01-01

    Driving a vehicle, either directly or remotely, is an inherently visual task. When heavy fog limits visibility, we reduce our car's speed to a slow crawl, even along very familiar roads. In teleoperation systems, an operator's view is limited to images provided by one or more cameras mounted on the remote vehicle. Traditional methods of vehicle teleoperation require that a real time stream of images is transmitted from the vehicle camera to the operator control station, and the operator steers the vehicle accordingly. For this type of teleoperation, the transmission link between the vehicle and operator workstation must be very high bandwidth (because of the high volume of images required) and very low latency (because delayed images can cause operators to steer incorrectly). In many situations, such a high-bandwidth, low-latency communication link is unavailable or even technically impossible to provide. Supervised TeleRobotics using Incremental Polyhedral Earth geometry, or STRIPE, is a teleoperation system for a robot vehicle that allows a human operator to accurately control the remote vehicle across very low bandwidth communication links, and communication links with large delays. In STRIPE, a single image from a camera mounted on the vehicle is transmitted to the operator workstation. The operator uses a mouse to pick a series of 'waypoints' in the image that define a path that the vehicle should follow. These 2D waypoints are then transmitted back to the vehicle, where they are used to compute the appropriate steering commands while the next image is being transmitted. STRIPE requires no advance knowledge of the terrain to be traversed, and can be used by novice operators with only minimal training. STRIPE is a unique combination of computer and human control. The computer must determine the 3D world path designated by the 2D waypoints and then accurately control the vehicle over rugged terrain. The human issues involve accurate path selection, and the

  5. Dietary administration of microalgae Navicula sp. affects immune status and gene expression of gilthead seabream (Sparus aurata).

    Science.gov (United States)

    Reyes-Becerril, Martha; Guardiola, Francisco; Rojas, Maurilia; Ascencio-Valle, Felipe; Esteban, María Ángeles

    2013-09-01

    Effects of silage microalgae enriched with a probiotic and lyophilized microalgae were evaluated on main immune parameters and different gene expression of gilthead seabream (Sparus aurata L.). A total of 60 seabream were grouped into 3 treatment diets which were a control diet (commercial diet) without microalgae (C), commercial diet supplemented with silage microalgae Navicula sp. plus Lactobacillus sakei 5-4 (10(6) CFU g(-1)) (SM), and commercial diet supplemented with lyophilized microalgae (LM) for 4 weeks. Generally, the results showed a significant increase in the immune parameters, principally in leucocyte peroxidase, phagocytosis and complement activities in fish fed with SM diet compared to control group. About the gene expression in head-kidney, transcript levels (Interleukin-8, Interleukin-1β and β-defensin) were upregulated in fish fed with SM after 4 weeks of treatments. However, the gene expression was upregulated in intestine from fish fed with LM with significant difference in transferrin and cyclooxygenase 2 gene at 2 weeks, and in occludin, transferrin, interleukin-8 and interleukin-1β at 4 weeks. Finally, about the digestive enzymes, LM diet caused an upregulated of α-amylase and alkaline phosphatase genes at 2 weeks; however SM diet caused an upregulated trypsin gene at 4 weeks. SM diet a higher enhancing effect on gilthead seabream immune parameters than that observed when using LM. Furthermore, dietary administration of microalgae Navicula sp. provokes upregulation of several genes in the gut that correlates with slight inflammation. Further studies are needed to know if this diatom could be useful for administering as diet supplement for farmed fish. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Algerian propolis extracts: Chemical composition, bactericidal activity and in vitro effects on gilthead seabream innate immune responses.

    Science.gov (United States)

    Soltani, El-Khamsa; Cerezuela, Rebeca; Charef, Noureddine; Mezaache-Aichour, Samia; Esteban, Maria Angeles; Zerroug, Mohamed Mihoub

    2017-03-01

    Propolis has been used as a medicinal agent for centuries. The chemical composition of four propolis samples collected from four locations of the Sétif region, Algeria, using gas chromatography-mass spectrometry was determined. More than 20 compounds and from 30 to 35 compounds were identified in the aqueous and ethanolic extracts, respectively. Furthermore, the antimicrobial activity of the propolis extracts against two marine pathogenic bacteria was evaluated. Finally, the in vitro effects of propolis on gilthead seabream (Sparus aurata L.) leucocyte activities were measured. The bactericidal activity of ethanolic extracts was very high against Shewanella putrefaciens, average against Photobacterium damselae and very low against Vibrio harveyi. The lowest bactericidal activity was always that found for the aqueous extracts. When the viability of gilthead seabream head-kidney leucocytes was measured after 30 min' incubation with the different extracts, both the ethanolic and aqueous extracts of one of the propolis samples (from Babor) and the aqueous extract of another (from Ain-Abbassa) provoked a significant decrease in cell viability when used at concentrations of 100 and 200 μg ml -1 . Furthermore, significant inhibitory effects were recorded on leucocyte respiratory burst activity when isolated leucocytes where preincubated with the extracts. This effect was dose-dependent in all cases except when extracts from a third propolis sample (from Boutaleb) were used. Our findings suggest that some of Algerian propolis extracts have bactericidal activity against important bacterial pathogens in seabream and significantly modulate in vitro leucocyte activities, confirming their potential as a source of new natural biocides and/or immunomodulators in aquaculture practice. Copyright © 2017 Elsevier Ltd. All rights reserved.

  7. Recombinant gilthead seabream (Sparus aurata) insulin-like growth factor-I: subcloning, expression in Escherichia coli, purification and characterization.

    Science.gov (United States)

    Fine, M; Amuly, R; Sandowski, Y; Marchant, T A; Chan, S J; Gertler, A; Funkenstein, B

    1997-04-01

    Gilthead seabream (Sparus aurata) insulin-like growth factor-I (gsIGF-I) cDNA coding for the mature protein was cloned in a pGEM-3Z vector, and then transferred into prokaryotic expression vector pET-11a and expressed in Escherichia coli BL21(DE3) cells upon induction with isopropyl thiogalactoside. The expressed protein contained within the inclusion-body pellet was solubilized in 4.5 M urea, refolded for 24 h at pH 11.3 in the presence of catalytic amounts of cysteine and purified to over 98% purity, as a monomeric methionyl-gsIGF-I. Amino acid composition and N-terminal sequence confirmed the identity to be the predicted protein. Binding assays of the 125I-gsIGF-I to gilthead seabream or carp (Cyprinus carpio) sera resulted in high specific binding, indicating the existence of one or more IGF-binding proteins. In binding experiments to crude gilthead seabream brain homogenate, using human (h) IGF-I as a ligand, the respective IC50 value of hIGF-I was about fourfold lower than that of gsIGF-I. Recombinant gsIGF-I exhibited mitogenic activity in a mouse mammary gland-derived MME-L1 cell line which was approximately 200-fold lower than that of hIGF-1. Binding experiments to intact MME-L1 cells suggests that this difference most likely results from a correspondingly lower affinity for IGF-I receptor in these cells. In contrast, the activities of gsIGF-I and hIGF-I measured by 35S uptake by gill arches from the goldfish (Carassius auratus) were identical, indicating that the recombinant gsIGF-I is biologically active.

  8. Crystal shapes on striped surface domains

    International Nuclear Information System (INIS)

    Valencia, Antoni

    2004-01-01

    The equilibrium shapes of a simple cubic crystal in contact with a planar chemically patterned substrate are studied theoretically using an effective interface model. The substrate is primarily made of lyophobic material and is patterned with a lyophilic (easily wettable) stripe domain. Three regimes can be distinguished for the equilibrium shapes of the crystal. The transitions between these regimes as the volume of the crystal is changed are continuous or discontinuous depending on the strength of the couplings between the crystal and the lyophilic and lyophobic surface domains. If the crystal grows through a series of states close to equilibrium, the discontinuous transitions correspond to growth instabilities. These transitions are compared with similar results that have been obtained for a volume of liquid wetting a lyophilic stripe domain

  9. Somatic indexes, chemical-nutritive characteristics and metal content in caught and reared sharpsnout seabream (Diplodus puntazzo

    Directory of Open Access Journals (Sweden)

    Giuseppe Moniello

    2010-01-01

    Full Text Available The aim of this study was to compare some somatic indexes, chemical-nutritive characteristics and the contents of some metals (Pb, Cu, Cr and Zn in the whole body and fillet from caught and reared sharpsnout seabream (Diplodus puntazzo. The fish came from three different conditions: reared in marine cages (R, captured in a natural lagoon (L and in the Mediterranean sea (S. Thirty fish per group, divided into three weight categories (100±15.3, 200±18.7 and 300±20.4g, were used for the trial. Reared sharpsnout seabream showed higher amounts of celomatic fat (3.41%, 2.43%, 0.21%, respectively for R, L and S and total lipid (13.86%, 11.23% and 5.06% respectively for R, L and S, and lower moisture (64.14%, 65.54%, 71.53% and protein (17.73, 19.03 and 19.17% than those caught in the lagoon and sea. The whole body of reared fish contained lower amounts of lead (0.70, 0.75 and 0.97mg/kg, respectively for R, L and S, copper (0.15, 0.38, 0.25mg/kg chrome (2.19, 3.52, 3.77mg/kg and higher zinc contents (63.47, 53.42, 47.31mg/kg than caught fish. Fatty acids from sharpsnout seabream fillets showed a high lipid quality as confirmed also by low values of Thrombogenic index (0.36, 0.30 and 0.22, respectively for L, S, R and Atherogenic index (0.47, 0.42 and 0.33, respectively for L, S, R. Reared sharpsnout seabream showed lower saturated fatty acid values (26.44%, 32.21%, 34.85%, respectively for R, S, L and higher oleic acid amount (21.61%, 19.15%, 11.99%, respectively for R, L and S. The subjects captured in the sea had a higher arachidonic acid content (5.44%, 1.76%, 0.59%, respectively for S, L, R. In the weight categories, the 100g subjects, showed higher incidence of viscera (VSI: 4.32%, 3.12% and 2.92%, respectively for 100, 200 and 300g and liver (HIS: 2.20%, 1.97%, and 1.77%, respectively for 100, 200 and 300g, higher moisture (69.49%, 67.03%, 64.69% and lower lipid rate (7.64%, 10.18%, 12.32%.

  10. Potencies of red seabream AHR1- and AHR2-mediated transactivation by dioxins: implication of both AHRs in dioxin toxicity.

    Science.gov (United States)

    Bak, Su-Min; Iida, Midori; Hirano, Masashi; Iwata, Hisato; Kim, Eun-Young

    2013-03-19

    To evaluate species- and isoform-specific responses to dioxins and related compounds (DRCs) via aryl hydrocarbon receptor (AHR) in the red seabream ( Pagrus major ), we constructed a reporter gene assay system. Each expression plasmid of red seabream AHR1 (rsAHR1) and AHR2 (rsAHR2) together with a reporter plasmid containing red seabream CYP1A 5'-flanking region were transfected into COS-7 cells. The cells were treated with graded concentrations of seven DRC congeners including 2,3,7,8-TCDD, 1,2,3,7,8-PeCDD, 1,2,3,4,7,8-HxCDD, 2,3,7,8-TCDF, 2,3,4,7,8-PeCDF, 1,2,3,4,7,8-HxCDF, and PCB126. Both rsAHR1 and rsAHR2 exhibited dose-dependent responses for all the tested congeners. The rsAHR isoform-specific TCDD induction equivalency factors (rsAHR1- and rsAHR2-IEFs) were calculated on the basis of 2,3,7,8-TCDD relative potency derived from the dose-response of each congener. The rsAHR1-IEFs of PeCDD, HxCDD, TCDF, PeCDF, and HxCDF were estimated as 0.17, 0.29, 2.5, 1.5, and 0.27, respectively. For PCB126, no rsAHR1-IEF was given because of less than 10% 2,3,7,8-TCDD maximum response. The rsAHR2-IEFs of PeCDD, HxCDD, TCDF, PeCDF, HxCDF, and PCB126 were estimated as 0.38, 0.13, 1.5, 0.93, 0.20, and 0.0085, respectively. The rsAHR1/2-IEF profiles were different from WHO toxic equivalency factors for fish. In silico docking simulations supported that both rsAHRs have potentials to bind to these congeners. These results suggest that dioxin toxicities may be mediated by both rsAHRs in red seabreams.

  11. The preparation of immunochromatographic stripe of methamphetamine

    International Nuclear Information System (INIS)

    Jiang Jing; Liu Yibing; Zhou Ling; Guo Weizheng

    2004-01-01

    A gold immunochromatographic assay (GICA) is developed for methamphetamine in urine. Colloidal gold is obtained by reducing the gold chloride with sodium citrate, and labeled methamphetamine monoclonal antibody. The drug or metabolite competes with the immobilized drug conjugate in the test area for the limited colloidal gold-labeled antibody complex in which the stripe is made to screen the drug abuser. This method has sensitivity of 1000 μg/L, and without cross-reaction with some drugs

  12. 3D face recognition using isogeodesic stripes.

    Science.gov (United States)

    Berretti, Stefano; Del Bimbo, Alberto; Pala, Pietro

    2010-12-01

    In this paper, we present a novel approach to 3D face matching that shows high effectiveness in distinguishing facial differences between distinct individuals from differences induced by nonneutral expressions within the same individual. The approach takes into account geometrical information of the 3D face and encodes the relevant information into a compact representation in the form of a graph. Nodes of the graph represent equal width isogeodesic facial stripes. Arcs between pairs of nodes are labeled with descriptors, referred to as 3D Weighted Walkthroughs (3DWWs), that capture the mutual relative spatial displacement between all the pairs of points of the corresponding stripes. Face partitioning into isogeodesic stripes and 3DWWs together provide an approximate representation of local morphology of faces that exhibits smooth variations for changes induced by facial expressions. The graph-based representation permits very efficient matching for face recognition and is also suited to being employed for face identification in very large data sets with the support of appropriate index structures. The method obtained the best ranking at the SHREC 2008 contest for 3D face recognition. We present an extensive comparative evaluation of the performance with the FRGC v2.0 data set and the SHREC08 data set.

  13. Classifying Variable Sources in SDSS Stripe 82

    Science.gov (United States)

    Willecke Lindberg, Christina

    2018-01-01

    SDSS (Sloan Digital Sky Survey) Stripe 82 is a well-documented and researched region of the sky that does not have all of its ~67,500 variable objects labeled. By collecting data and consulting different catalogs such as the Catalina Survey, we are able to slowly cross-match more objects and add classifications within the Stripe 82 catalog. Such matching is performed either by pairing SDSS identification numbers, or by converting and comparing the coordinates of every object within the Stripe 82 catalog to every object within the classified catalog, such as the Catalina Survey catalog. If matching is performed with converted coordinates, a follow-up check is performed to ascertain that the magnitudes of the paired objects are within a reasonable margin of error and that objects have not been mismatched. Once matches have been confirmed, the light curves of classified objects can then be used to determine features that most effectively separate the different types of variable objects in feature spaces. By classifying variable objects, we can construct a reference for subsequent large research surveys, such as LSST (the Large Synoptic Survey Telescope), that could utilize SDSS data as a training set for its own classifications.

  14. Occupational Noise Reduction in CNC Striping Process

    Science.gov (United States)

    Mahmad Khairai, Kamarulzaman; Shamime Salleh, Nurul; Razlan Yusoff, Ahmad

    2018-03-01

    Occupational noise hearing loss with high level exposure is common occupational hazards. In CNC striping process, employee that exposed to high noise level for a long time as 8-hour contributes to hearing loss, create physical and psychological stress that reduce productivity. In this paper, CNC stripping process with high level noises are measured and reduced to the permissible noise exposure. First condition is all machines shutting down and second condition when all CNC machine under operations. For both conditions, noise exposures were measured to evaluate the noise problems and sources. After improvement made, the noise exposures were measured to evaluate the effectiveness of reduction. The initial average noise level at the first condition is 95.797 dB (A). After the pneumatic system with leakage was solved, the noise reduced to 55.517 dB (A). The average noise level at the second condition is 109.340 dB (A). After six machines were gathered at one area and cover that area with plastic curtain, the noise reduced to 95.209 dB (A). In conclusion, the noise level exposure in CNC striping machine is high and exceed the permissible noise exposure can be reduced to acceptable levels. The reduction of noise level in CNC striping processes enhanced productivity in the industry.

  15. Effects of dietary inulin and heat-inactivated Bacillus subtilis on gilthead seabream (Sparus aurata L.) innate immune parameters.

    Science.gov (United States)

    Cerezuela, R; Cuesta, A; Meseguer, J; Esteban, M A

    2012-03-01

    In the present study, a feeding trial was conducted to evaluate the effect of inulin and heat-inactivated Bacillus subtilis, single or combined, on several innate immune activities of gilthead seabream (Sparus aurata). Forty-eight specimens were randomly assigned to four dietary treatments: 0 (control), inulin (10 g/kg, prebiotic group), B. subtilis (10(7) cfu/g, probiotic group), or B. subtilis + inulin (10(7) cfu/g + 10 g/kg, synbiotic group). After two and four weeks, six fish of each group were sampled, with the main innate immune parameters (natural haemolytic complement activity, serum and leucocyte peroxidase, phagocytosis, respiratory burst, and cytotoxic activities) being determined. Inulin or heat-inactivated B. subtilis failed to significantly stimulate the innate immune parameters assayed, although some activities showed no significant increase through these treatments. A combination of inulin and B. subtilis resulted in an increase of such parameters, with the haemolytic complement activity being the only one significantly stimulated. To conclude, inulin and B. subtilis, when administered as a synbiotic, have a synergistic effect and enhance some innate immune parameters of gilthead seabream.

  16. Extra- and intra-cellular ice formation of red seabream (Pagrus major) embryos at different cooling rates.

    Science.gov (United States)

    Li, J; Zhang, L L; Liu, Q H; Xu, X Z; Xiao, Z Z; Ma, D Y; Xu, S H; Xue, Q Z

    2009-08-01

    The ice crystal formation is assumed as the most lethal factor for the failure of fish embryo cryopreservation and intracellular ice formation (IIF) plays a central role in cell injury during cooling. The objectives were to observe the morphological changes of red seabream (Pagrus major) embryo during the cooling-thawing process, and to examine the effect of cryoprotectant and cooling rate on the temperatures of oil globule ice formation (T(OIF)), extra-cellular ice formation (T(EIF)) and intracellular ice formation (T(IIF)) using cryomicroscope. After thawing, the morphological changes of embryos were observed and recorded by the video attachment and monitor under the microscope. During the cooling process, three representative phenomena were observed: oil globule gradually turned bright firstly, then the whole field of view flashed and the embryo blackened. Cooling rate affect the temperature of both extra- and intra-cellular ice formations. T(EIF) and T(IIF) at high cooling rate were much lower than that at low cooling rate. And the value of T(EIF)-T(IIF) increased from 0.45 to 11.11 degrees C with the increase of cooling rate from 3 to130 degrees C/min. Taken together, our results suggested that high cooling rate with proper cryoprotectant would be a good option for red seabream embryo cryopreservation.

  17. Effect of Phenanthrene on the Tissue Structure of Liver and Aminotransferase Enzymes in Yellowfin Seabream (Acanthopagrus latus

    Directory of Open Access Journals (Sweden)

    Mehrnaz Shirmohammadi*

    2017-06-01

    Full Text Available Background: Polycyclic aromatic hydrocarbons (PAHs such as phenanthrene (Phe represent one of the most abundant forms of organic pollutants. The aim of this study was to assess changes in plasma levels of aminotransferase enzymes, total protein and liver tissue as biomarkers of yellowfin seabream (Acanthopagrus latus exposed to Phe for 14 d. Methods: The research was carried out in January 2016 at Khorramshahr University of Marine Sciences and Technology, Khorramshahr, Iran. Some 72 fish were injected with 2, 20, 40 and 70 mg/kg of Phe. Then tissue and blood samples were obtained at 1, 4, 7 and 14 d after injection. Results: Exposure of fish to Phe resulted in a significant increase of alanine aminotransferase (ALT, aspartate aminotransferase (AST and decrease of total protein after 7 d of the experiment (P<0.05. The main histopathological alteration was showed in different sampling days including nucleus margination, hypertrophy, vacuolation, melanomacrophages aggregates, sinusoid dilation, degeneration and picnotic nucleus. Degree of tissue change (DTC of liver was recorded in the Phe-exposed fish from normal range to moderate changes. Conclusion: The studied biomarkers such as changes in concentrations of ALT, AST and total protein as well as tissue damages in liver may be served as beneficial biomarker to assess Phe toxicity in yellowfin seabream.

  18. Inhomogeneous Stripe Phase Revisited for Surface Superconductivity

    Science.gov (United States)

    Barzykin, Victor; Gor'kov, Lev P.

    2002-11-01

    We consider 2D surface superconductivity in high magnetic fields parallel to the surface. We demonstrate that the spin-orbit interaction at the surface changes the properties of the inhomogeneous superconducting Larkin-Ovchinnikov-Fulde-Ferrell (LOFF) state that develops above fields given by the paramagnetic criterion. Strong spin-orbit interaction significantly broadens the range of existence of the LOFF phase, which takes the form of periodic superconducting stripes running along the field direction on the surface, leading to the anisotropy of its properties. Our results provide a tool for studying surface superconductivity as a function of doping.

  19. leaf and stripe rust resistance among ethiopian grown wheat ...

    African Journals Online (AJOL)

    ADMIN

    pathogen pathotypes. These varieties and lines, therefore, may be utilized in leaf and stripe rust resistance breeding programs. Key words/phrases: Leaf rust, resistance, stripe rust, Triticum aestivum, Triticum turgidum. * Current address: University of Limpopo, School of Agricultural and Environmental Sciences, Private Bag ...

  20. Transfer of stripe rust resistance from Aegilops variabilis to bread ...

    African Journals Online (AJOL)

    In terms of area, the bread wheat producing regions of China comprise the largest area in the world that is constantly threatened by stripe rust epidemics. Consequently, it is important to exploit new adultplant resistance genes in breeding. This study reports the transfer of stripe rust resistance from Aegilops variabilis to ...

  1. Competing States in the t-J Model: Uniform d-Wave State versus Stripe State versus Stripe State

    NARCIS (Netherlands)

    Corboz, P.R.; Rice, T.M.; Troyer, M.

    2014-01-01

    Variational studies of the t-J model on the square lattice based on infinite projected-entangled pair states confirm an extremely close competition between a uniform d-wave superconducting state and different stripe states. The site-centered stripe with an in-phase d-wave order has an equal or only

  2. Nutritional mitigation of winter thermal stress in gilthead seabream associated metabolic pathways and potential indicators of nutritional state

    DEFF Research Database (Denmark)

    Richard, Nadege; Silva, Tomé S.; Wulff, Tune

    2016-01-01

    A trial was carried out with gilthead seabream juveniles, aiming to investigate the ability of an enhanced dietary formulation (diet Winter Feed, WF, containing a higher proportion of marine-derived protein sources and supplemented in phospholipids, vitamin C, vitamin E and taurine) to assist fis...... and metabolic profiling purposes. Intragroup variability and co-measured information were also used to pinpoint which proteins displayed a stronger relation with fish nutritional state....... in coping with winter thermal stress, compared to a low-cost commercial diet (diet CTRL). In order to identify the metabolic pathways affected by WF diet, a comparative two dimensional differential in-gel electrophoresis (2D-DIGE) analysis of fish liver proteome (pH 4–7) was undertaken at the end of winter...

  3. Effects of dietary inulin, Bacillus subtilis and microalgae on intestinal gene expression in gilthead seabream (Sparus aurata L.).

    Science.gov (United States)

    Cerezuela, Rebeca; Meseguer, José; Esteban, M Ángeles

    2013-03-01

    The present work describes effects of dietary inulin, two microalgae (Tetraselmis chuii and Phaeodactylum tricornutum) and Bacillus subtilis (solely or combined with inulin or microalgae) on the expression of different genes in the intestine of the gilthead seabream (Sparus aurata L.) following four weeks of a feeding trial. Selected genes were grouped into five categories: genes involved in inflammation (genes encoding proinflammatory proteins), genes related to the cytoskeleton, genes encoding proteins of junction complexes, genes implicated in digestion processes and genes related to transport proteins. Regarding proinflammatory genes, interleukin-8 (IL-8) expression showed a significant increase in the fish fed all the assayed diets, except the B. subtilis + inulin diet, whereas the expression of caspase-1 (CASP-1) was also increased by the B. subtilis and B. subtilis + T. chuii diets. Cyclooxygenase-2 (COX-2) gene expression only increased in fish fed the B. subtilis diet. Among cytoskeletal and junctional genes, only β-actin and occludin were significantly affected by the assayed diets. β-actin expression was up-regulated by the inulin-containing diets (inulin and B. subtilis + inulin diets), whereas occludin expression increased in the fish fed all the assayed diets, except the P. tricornutum diet. Finally, the expression of transport protein genes demonstrated that the inulin diet and all the experimental diets containing B. subtilis significantly increased transferrin expression, whereas digestive enzymes were not affected by the experimental diets. In conclusion, our results demonstrated that inulin, B. subtilis and microalgae can modulate intestinal gene expression in the gilthead seabream. To our knowledge, this is the first study of the effects of some food additives on the intestinal expression of different genes in this species. More studies are needed to understand the role of these genes in maintaining the integrity and

  4. Effects of dietary administration of fenugreek seeds on metabolic parameters and immune status of gilthead seabream (Sparus aurata L.).

    Science.gov (United States)

    Guardiola, F A; Bahi, A; Esteban, M A

    2018-03-01

    Medical plants could be used as a prophylactic method in aquaculture because they are considered safe and so very promising alternatives to the use of chemicals. The aim of the present work was to examine the effects of dietary fenugreek (Trigonella foenum graecum) seeds administered for 8 weeks on the metabolic and immune status of gilthead seabream (Sparus aurata L.). Four experimental groups were designated: one receiving a basal diet (control) and three fed powdered fenugreek seeds incorporated in the fish feed at 1%, 5% and 10%. The results show that significant decreases in aspartate aminotransferase, creatine kinase, potassium and the albumin/globulin ratio were detected in the serum of fish fed 10% fenugreek compared with the values recorded in control fish. As regards the immune status, fish fed the 5% supplemented diet had higher haemolytic complement and peroxidase activities than the control fish whilst antiprotease activity was higher in fish fed the 1% fenugreek level respect to control fish and the fish fed the highest fenugreek supplementation rate. Interestingly, the results also revealed a significant enhancement of most of the cellular immune parameters studied, especially in fish fed the highest level of fenugreek (10%). However, the bacteriostatic activity of serum against fish pathogenic and non-pathogenic bacteria was non-affected to any significant extent in fish fed the supplemented diets. Overall, the results suggest that the high level of dietary fenugreek tested in this work (10%) did not negatively affect any of the metabolic parameters measured in serum but increased some of them. In addition, the inclusion of fenugreek seeds in the gilthead seabream diet at 5% or 10% improved the humoral and cellular immune activities, respectively. Further studies are needed to better understand the effects of this natural product, which may be suitable for use as a feed additive in fish aquaculture. Copyright © 2018 Elsevier Ltd. All rights

  5. Critical assessment of the evidence for striped nanoparticles.

    Directory of Open Access Journals (Sweden)

    Julian Stirling

    Full Text Available There is now a significant body of literature which reports that stripes form in the ligand shell of suitably functionalised Au nanoparticles. This stripe morphology has been proposed to strongly affect the physicochemical and biochemical properties of the particles. We critique the published evidence for striped nanoparticles in detail, with a particular focus on the interpretation of scanning tunnelling microscopy (STM data (as this is the only technique which ostensibly provides direct evidence for the presence of stripes. Through a combination of an exhaustive re-analysis of the original data, in addition to new experimental measurements of a simple control sample comprising entirely unfunctionalised particles, we show that all of the STM evidence for striped nanoparticles published to date can instead be explained by a combination of well-known instrumental artefacts, or by issues with data acquisition/analysis protocols. We also critically re-examine the evidence for the presence of ligand stripes which has been claimed to have been found from transmission electron microscopy, nuclear magnetic resonance spectroscopy, small angle neutron scattering experiments, and computer simulations. Although these data can indeed be interpreted in terms of stripe formation, we show that the reported results can alternatively be explained as arising from a combination of instrumental artefacts and inadequate data analysis techniques.

  6. Critical assessment of the evidence for striped nanoparticles.

    Science.gov (United States)

    Stirling, Julian; Lekkas, Ioannis; Sweetman, Adam; Djuranovic, Predrag; Guo, Quanmin; Pauw, Brian; Granwehr, Josef; Lévy, Raphaël; Moriarty, Philip

    2014-01-01

    There is now a significant body of literature which reports that stripes form in the ligand shell of suitably functionalised Au nanoparticles. This stripe morphology has been proposed to strongly affect the physicochemical and biochemical properties of the particles. We critique the published evidence for striped nanoparticles in detail, with a particular focus on the interpretation of scanning tunnelling microscopy (STM) data (as this is the only technique which ostensibly provides direct evidence for the presence of stripes). Through a combination of an exhaustive re-analysis of the original data, in addition to new experimental measurements of a simple control sample comprising entirely unfunctionalised particles, we show that all of the STM evidence for striped nanoparticles published to date can instead be explained by a combination of well-known instrumental artefacts, or by issues with data acquisition/analysis protocols. We also critically re-examine the evidence for the presence of ligand stripes which has been claimed to have been found from transmission electron microscopy, nuclear magnetic resonance spectroscopy, small angle neutron scattering experiments, and computer simulations. Although these data can indeed be interpreted in terms of stripe formation, we show that the reported results can alternatively be explained as arising from a combination of instrumental artefacts and inadequate data analysis techniques.

  7. Towards a deeper understanding of fatty acid bioaccessibility and its dependence on culinary treatment and lipid class: a case study of gilthead seabream (Sparus aurata).

    Science.gov (United States)

    Costa, Sara; Afonso, Cláudia; Cardoso, Carlos; Oliveira, Rui; Alves, Francisca; Nunes, Maria L; Bandarra, Narcisa M

    2016-11-08

    The bioaccessibility of total lipids and fatty acids (FA) in raw and grilled gilthead seabream (Sparus aurata) was determined using an in vitro digestion model. The particular impact of grilling on the FA profile of seabream was also studied. In addition, the influence of lipid class on the bioaccessibility of each FA was analysed. Grilling did not change the relative FA profile, and only the absolute values were altered. However, the relative FA profile varied across lipid classes, being more dissimilar between TAG and phospholipids. Long-chain SFA and PUFA seemed to be less bioaccessible. Moreover, grilling reduced bioaccessibility of protein, fat and many FA, with the highest reductions found in PUFA such as the DHA. Strong evidence supporting a predominantly regioselective action of lipase during in vitro digestion was found, and the impact of this phenomenon on FA bioaccessibility was assessed.

  8. Influence of supplemental maslinic acid (olive-derived triterpene) on the post-mortem muscle properties and quality traits of gilthead seabream

    DEFF Research Database (Denmark)

    Matos, E.; Silva, Tomé Santos; Wulff, Tune

    2013-01-01

    , enzymatic activities and protein expression in the muscle were assessed. Supplementing gilthead seabream diets with maslinic acid mainly resulted in hypertrophy of muscle fibres and inhibition of cathepsin B activity, with no observed differences in terms of glycogen and ATP content of the muscle, as well...... as glycogen phosphorylase activity. Proteomic analysis showed a low impact of maslinic acid supplementation on muscle metabolism, with most changes reflecting increased stress coping capacity and muscle hypertrophy in maslinic acid-fed fish. As a finishing strategy to improve the muscle's energetic status......Maslinic acid, a natural triterpene, was evaluated as a dietary supplement to modulate glycogen post-mortem mobilization in gilthead seabream muscle. For this purpose, a multidisciplinary trial was undertaken, where flesh quality criteria, as well as biochemical and histological parameters...

  9. Rice Distillers Dried Grain Is a Promising Ingredient as a Partial Replacement of Plant Origin Sources in the Diet for Juvenile Red Seabream (

    Directory of Open Access Journals (Sweden)

    Jin Choi

    2014-12-01

    Full Text Available This study was designed to test the effects of dietary distillers dried grain (DDG level on the growth performance, feed utilization, body composition and antioxidant activity of juvenile red seabream (Pagrus major. Six isonitrogenous and isocaloric diets were formulated to contain 0%, 5%, 10%, 15%, 20%, and 25% DDG from rice (designated as DDG0, DDG5, DDG10, DDG15, DDG20, and DDG25, respectively. Juvenile red seabream averaging 10.1±0.05 g were randomly distributed into 400-L tanks in a flow through systems. Three replicate groups of fish were fed one of the experimental diets to visual satiation two times a day for 10 weeks. Survival, weight gain, feed efficiency, protein efficiency ratio and hepatosomatic index of fish were not affected by dietary DDG levels (p>0.05. Proximate and amino acid composition of whole body in juvenile red seabream were not affected by dietary DDG levels (p>0.05. Plasma content of total protein, glucose, cholesterol, glutamic-pyruvic transaminase, phospholipid and triglyceride were not affected by dietary DDG levels (p>0.05. 1, 1-Diphenyl-2-picryl-hydrazyl radical and alkyl radical scavenging activities in plasma and liver of fish were not affected by dietary DDG levels (p>0.05. The results of this experiment suggest that DDG has the potential to replace plant origin ingredients such as wheat flour and corn gluten meal and could be used up to 25% in diet without incurring negative effects on the growth performance of juvenile red seabream.

  10. Oral delivery of live yeast Debaryomyces hansenii modulates the main innate immune parameters and the expression of immune-relevant genes in the gilthead seabream (Sparus aurata L.).

    Science.gov (United States)

    Reyes-Becerril, Martha; Salinas, Irene; Cuesta, Alberto; Meseguer, José; Tovar-Ramirez, Dariel; Ascencio-Valle, Felipe; Esteban, Maria Angeles

    2008-12-01

    Microorganisms isolated from fish can be used as prophylactic tools for aquaculture in the form of probiotic preparations. The purpose of this study was to evaluate the effects of dietary administration of the live yeast Debaryomyces hansenii CBS 8339 on the gilthead seabream (Sparus aurata L.) innate immune responses. Seabream were fed control or D. hansenii-supplemented diets (10(6) colony forming units, CFU g(-1)) for 4 weeks. Humoral (seric alternative complement and peroxidase activities), and cellular (peroxidase, phagocytic, respiratory burst and cytotoxic activities) innate immune parameters and antioxidant enzymes (superoxide dismutase (SOD) and catalase (CAT)) were measured from serum, head-kidney leucocytes and liver, respectively, after 2 and 4 weeks of feeding. Expression levels of immune-associated genes, Hep, IgM, TCR-beta, NCCRP-1, MHC-II alpha, CSF-1R, C3, TNF-alpha and IL-1 beta, were also evaluated by real-time PCR in head-kidney, liver and intestine. Humoral immune parameters were not significantly affected by the dietary supplementation of yeast at any time of the experiment. On the other hand, D. hansenii administration significantly enhanced leucocyte peroxidase and respiratory burst activity at week 4. Phagocytic and cytotoxic activities had significantly increased by week 2 of feeding yeast but unchanged by week 4. A significant increase in liver SOD activity was observed at week 2 of feeding with the supplemented diet; however CAT activity was not affected by the dietary yeast supplement at any time of the experiment. Finally, the yeast supplemented diet down-regulated the expression of most seabream genes, except C3, in liver and intestine and up-regulated all of them in the head-kidney. These results strongly support the idea that live yeast Debaryomyces hansenii strain CBS 8339 can stimulate the innate immune parameters in seabream, especially at cellular level.

  11. Application of a new real-time polymerase chain reaction assay for surveillance studies of lymphocystis disease virus in farmed gilthead seabream.

    Science.gov (United States)

    Valverde, Estefania J; Cano, Irene; Labella, Alejandro; Borrego, Juan J; Castro, Dolores

    2016-04-06

    Lymphocystis disease (LCD) is the main viral infection reported to affect cultured gilthead seabream (Sparus aurata) in Europe. The existence of subclinical Lymphocystis disease virus (LCDV) infection in this fish species has been recognised by using polymerase chain reaction (PCR)-based methods. Nevertheless, these methods do not provide quantitative results that can be useful in epidemiological and pathological studies. Moreover, carrier fish have been involved in viral transmission, therefore the use of specific and sensitive diagnostic methods to detect LCDV will be relevant for LCD prevention. We have developed a real-time PCR (qPCR) assay to detect and quantify LCDV. The assay was evaluated for viral diagnosis in surveillance studies in gilthead seabream farms, and also to identify viral reservoirs in a hatchery. The prevalence of LCDV infection in the asymptomatic gilthead seabream populations tested varied from 30 to 100 %, including data from one farm without previous records of LCD. Estimated viral load in caudal fin of subclinically infected fish was two to five orders of magnitude lower than in diseased fish. The qPCR assay allowed the detection of carrier fish in broodstock from a farm with a history of clinical LCD in juvenile fish. In addition, the quantitative detection of LCDV was achieved in all samples collected in the hatchery, including fertilized eggs, larvae and fingerlings, and also rotifer cultures and artemia metanauplii and cysts used for larval rearing. The qPCR assay developed in this study has proved to be a rapid, sensitive, and reliable method for LCDV diagnosis, which could be valuable to identify LCDV reservoirs or to study viral replication in gilthead seabream.

  12. Population biology of sparid fishes in qatari waters 3. Reproductive cycle and fecundity of black-banded Seabream, mylio bifasciatus (forsskal)

    OpenAIRE

    El Sayed, Abdel Fattah M. [عبد الفتاح محمد السيد

    1994-01-01

    The reproductive cycle, gonads maturation, gonado-somatic indices (GSI) and fecundity of black-banded seabream Mylio bifasciatus from the Arabian Gulf waters off Qatar were investigated. Bi-weekly samples representing all age groups were collected from January through December, 1993. Gonad maturation occurred in December-March. Spawning was restricted to about 2 weeks from mid to late April (2nd and 3rd quarters of the lunar month). No changes in gonads conditions were noted from May to Novem...

  13. Stripe order from the perspective of the Hubbard model

    Energy Technology Data Exchange (ETDEWEB)

    Devereaux, Thomas Peter

    2018-03-01

    A microscopic understanding of the strongly correlated physics of the cuprates must account for the translational and rotational symmetry breaking that is present across all cuprate families, commonly in the form of stripes. Here we investigate emergence of stripes in the Hubbard model, a minimal model believed to be relevant to the cuprate superconductors, using determinant quantum Monte Carlo (DQMC) simulations at finite temperatures and density matrix renormalization group (DMRG) ground state calculations. By varying temperature, doping, and model parameters, we characterize the extent of stripes throughout the phase diagram of the Hubbard model. Our results show that including the often neglected next-nearest-neighbor hopping leads to the absence of spin incommensurability upon electron-doping and nearly half-filled stripes upon hole-doping. The similarities of these findings to experimental results on both electron and hole-doped cuprate families support a unified description across a large portion of the cuprate phase diagram.

  14. Curcurbita pepo subspecies delineates striped cucumber beetle (Acalymma vittatum) preference

    Science.gov (United States)

    Brzozowski, L; Leckie, B M; Gardner, J; Hoffmann, M P; Mazourek, M

    2016-01-01

    The striped cucumber beetle (Acalymma vittatum (F.)) is a destructive pest of cucurbit crops, and management could be improved by host plant resistance, especially in organic farming systems. However, despite the variation in striped cucumber beetle preference observed within the economically important species, Cucurbita pepo L., plant breeders and entomologists lacked a simple framework to classify and exploit these differences. This study used recent phylogenetic evidence and bioassays to organize striped cucumber beetle preference within C. pepo. Our results indicate preference contrasts between the two agriculturally relevant subspecies: C. pepo subsp. texana and C. pepo subsp. pepo. Plants of C. pepo subsp. pepo were more strongly preferred than C. pepo subsp. texana plants. This structure of beetle preference in C. pepo will allow plant breeders and entomologists to better focus research efforts on host plant non-preference to control striped cucumber beetles. PMID:27347423

  15. Pathological changes associated with white striping in broiler breast muscles.

    Science.gov (United States)

    Kuttappan, V A; Shivaprasad, H L; Shaw, D P; Valentine, B A; Hargis, B M; Clark, F D; McKee, S R; Owens, C M

    2013-02-01

    White striping is a condition in broiler chickens characterized grossly by the occurrence of white striations, seen parallel to the direction of muscle fibers, on broiler breast fillets and thighs. Based on visual evaluation of the intensity of white striping, breast fillets can be categorized into normal (NORM), moderate (MOD), and severe (SEV) categories. This study was undertaken to evaluate the details of changes in histology as well as proximate composition occurring in the fillets with respect to the 3 degrees of white striping. In experiment 1, representative breast fillets for each degree of white striping (n = 20) were collected from 45-d-old broilers, approximately 2 h postmortem. From each fillet, 2 skeletal muscle samples were obtained and fixed in 10% neutral buffered formalin. To identify and differentiate the histological changes, slides were prepared and stained using hematoxylin and eosin, Masson's Trichrome, and Oil Red O stains. In experiment 2, samples with 3 degrees of white striping were collected from 57-d-old birds for conducting proximate analysis. Major histopathological changes observed in the MOD and SEV samples consisted of loss of cross striations, variability in fiber size, floccular/vacuolar degeneration and lysis of fibers, mild mineralization, occasional regeneration (nuclear rowing and multinucleated cells), mononuclear cell infiltration, lipidosis, and interstitial inflammation and fibrosis. Microscopic lesions were visually scored for degeneration and necrosis, fibrosis, and lipidosis. The scale used to score the samples ranged from 0 (normal) to 3 (severe). There was an increase (P white striping increased from NORM to SEV. The results from the histopathological study were supported by the findings from proximate analysis confirming that the fat and protein contents of muscle increased (P white striping increased. In conclusion, the histopathological changes occurring in white striping indicate a degenerative myopathy that

  16. Effect of seaweed supplementation on growth performance, immune and oxidative stress responses in gilthead seabream (Sparus aurata

    Directory of Open Access Journals (Sweden)

    Augusto Cesar dos Santos Queiroz

    2014-06-01

    Full Text Available Seaweeds have important nutraceutical properties, including antioxidant and biological response-modifying qualities. Their dietary supplementation may increase the immune and antioxidant capacity of fish necessary to cope to stressful conditions and minimizing disease outbreaks. There are essentially four major groups of seaweed that can be classified by color, namely green (Chlorophyta, brown/yellow (Phaeophyta, red (Rhodophyta, and blue-green (Cyanophyta. Some green seaweed has active radical scavenging properties. Red and brown have bioactive compounds that play a vital role as antihypertensive and antioxidant. The current study was designed to evaluate the effects of seaweed supplementation on growth performance, immune and oxidative stress responses in gilthead seabream (Sparus aurata. Three seaweed species, each from one of the following groups, Rhodophyta (R, Phaeophyta (P and Chlorophyta (C, were supplemented to the experimental diets at 2.5% and 7.5% and tested against a control diet (Ctrl with no supplementation. In addition to six diets with seaweed in two different levels of supplementation: R2.5%, P2.5%, C2.5%, R7.5%, P7.5% and C7.5%; a diet with a mix (M, supplemented at 7.5% (2.5% of each algae was also tested. A total of 360 seabream fingerlings, 13.07 ± 0.13cm and 31.17 ± 0.63g were allocated in 24 rectangular tanks, 115L capacity each, with a 4L/min water output connected to a recirculation seawater system. Fish were fed twice a day until satiation and water quality (temperature: 20.5 ºC; D.O.: 8.13 mg/L; Ammonia: 0.5 mg/L Nitrite: 0.5 mg/L were daily monitored. At day 40 of the trial, an intermediate sampling was carried out. Standard zootechnical parameters were measured for the growth performance determination. In addition, blood, liver and intestine samples were collected for the evaluation of the immune (lysozyme and peroxidase and oxidative stress (lipid peroxidation, glutathione peroxidase, glutathione reductase

  17. Millijansky radio variability in SDSS stripe 82

    Energy Technology Data Exchange (ETDEWEB)

    Hodge, J. A.; Becker, R. H. [University of California, 1 Shields Avenue, Davis, CA 95616 (United States); White, R. L. [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218 (United States); Richards, G. T., E-mail: hodge@mpia.de [Drexel University, 3141 Chestnut Street, Philadelphia, PA 19104 (United States)

    2013-06-01

    We report on a blind survey for extragalactic radio variability that was carried out by comparing two epochs of data from the Faint Images of the Radio Sky at Twenty centimeters survey with a third epoch from a new 1.4 GHz survey of SDSS Stripe 82. The three epochs are spaced seven years apart and have an overlapping area of 60 deg{sup 2}. We uncover 89 variable sources down to the millijansky level, 75 of which are newly identified, and we find no evidence for transient phenomena. This new sample of variable sources allows us to infer an upper limit to the mean characteristic timescale of active galactic nucleus radio variability of 14 yr. We find that only 1% of extragalactic sources have fractional variability f {sub var} > 3, while 44% of Galactic sources vary by this much. The variable sample contains a larger fraction of quasars than a comparable non-variable control sample, though the majority of the variable sources appear to be extended galaxies in the optical. This implies that either quasars are not the dominant contributor to the variability of the sample, or that the deep optical data allow us to detect the host galaxies of some low-z quasars. We use the new, higher resolution data to report on the morphology of the variable sources. Finally, we show that the fraction of sources that are variable remains constant or increases at low flux densities. This may imply that next generation radio surveys with telescopes like Australian Square Kilometer Array Pathfinder and MeerKAT will see a constant or even increasing fraction of variable sources down into the sub-millijansky regime.

  18. From stripe to slab confinement for DNA linearization in nanochannels

    Science.gov (United States)

    Cifra, Peter; Benkova, Zuzana; Namer, Pavol

    We investigate suggested advantageous analysis in the linearization experiments with macromolecules confined in a stripe-like channel using Monte Carlo simulations. The enhanced chain extension in a stripe that is due to significant excluded volume interactions between monomers in two dimensions weakens on transition to experimentally feasible slit-like channel. Based on the chain extension-confinement strength dependence and the structure factor behavior for the chain in stripe we infer the excluded volume regime typical for two-dimensional systems. On transition to the slab geometry, the advantageous chain extension decreases and the Gaussian regime is observed for not very long semiflexible chains. The evidence for pseudo-ideality in confined chains is based on indicators such as the extension curves, variation of the extension with the persistence length or the structure factor. The slab behavior is observed when the stripe (originally of monomer thickness) reaches the thickness larger than cca 10nm in the third dimension. This maximum height of the slab to retain the advantage of the stripe is very low and this have implication for DNA linearization experiments. The presented analysis, however, has a broader relevance for confined polymers. Support from Slovak R&D Agency (SRDA-0451-11) is acknowledged.

  19. The Bromodomain testis-specific gene (Brdt characterization and expression in gilthead seabream, Sparus aurata, and European seabass, Dicentrarchus labrax

    Directory of Open Access Journals (Sweden)

    M. Úbeda-Manzanaro

    2016-05-01

    Full Text Available Multiple genes and transcription factors are involved in regulation and control of the complex process of sex determination and differentiation of fish species. Also more, several hormonal factors and some environmental conditions can also be adequate spawning strategies and stimuli for inducing reproduction of fish species. Brdt gene belongs to the bromodomain-extraterminal domain (BET family of transcriptional coregulators. In mammals, Brdt gene is almost exclusively expressed in testis. Furthermore, Brdt protein is involved in elongating spermatids, and is required for proper spermatogenesis and male fertility. However, from our understanding of fish species, the role of this gene as key, during gametogenesis, still remains unknown. In this study, two Brdt mRNA transcripts were isolated from two teleostean fish species, gilthead seabream and European seabass. In both species the shorter form lacked a functional C-terminal domain, which may involve a different function as transcriptional regulator. The pattern of Brdt expression showed that the highest levels occurred in the gonads. Significantly lower levels of expression were detected in brain, pituitary and different organ systems (heart, kidney, gills, among other somatic tissues from both studied species. In situ hybridization approach evidenced that Brdt mRNA expression was restricted to specific cell-types of the germ line, during both oogenesis and spermatogenesis processes.

  20. Toxicological in vitro effects of heavy metals on gilthead seabream (Sparus aurata L.) head-kidney leucocytes.

    Science.gov (United States)

    Morcillo, Patricia; Cordero, Héctor; Meseguer, José; Esteban, María Á; Cuesta, Alberto

    2015-12-25

    Heavy metals provoke toxicological effects on aquatic animal species, including fish, though their effects on fish leucocytes and immunotoxicology are still limited. In the present work the effects of heavy metals (Cd, Hg, Pb or As) on viability, oxidative stress and innate immune parameters of isolated head-kidney leucocytes from gilthead seabream (Sparus aurata) are studied. Cytotoxicity results indicated that short exposures (30 min or 2h) to Hg promoted both apoptosis and necrosis cell death of leucocytes whilst Cd, Pb and As did only by apoptosis, in all cases in a concentration- and time-dependent manner. In addition, production of free oxygen radicals was induced by Cd, Hg and As heavy metals. Cd failed to change phagocytosis but Hg and As increased the percentage of phagocytic cells but decreased the number of ingested particles per cell whilst Pb increased both phagocytic parameters. On the other hand, respiratory burst activity was significantly reduced by incubation with Cd, Hg and As but increased with Pb. Furthermore, the gene expression profiles partly support the functional finding of this work. This study provides an in vitro approach for elucidating the heavy metals toxicity, and particularly the immunotoxicity, in fish leucocytes. Copyright © 2015 Elsevier Ltd. All rights reserved.

  1. Roadway striping productivity data analysis for INDOT Greenfield and Crawfordsville districts.

    Science.gov (United States)

    2013-11-01

    The main objective of the SPR3650 project is to provide an accurate overview of striping operation so that INDOT finds a way to : effectively save significant investment for purchasing new striping trucks in near future without compromising roadwa...

  2. Twin InSb/GaAs quantum nano-stripes: Growth optimization and related properties

    Science.gov (United States)

    Narabadeesuphakorn, Phisut; Thainoi, Supachok; Tandaechanurat, Aniwat; Kiravittaya, Suwit; Nuntawong, Noppadon; Sopitopan, Suwat; Yordsri, Visittapong; Thanachayanont, Chanchana; Kanjanachuchai, Songphol; Ratanathammaphan, Somchai; Panyakeow, Somsak

    2018-04-01

    Growth of InSb/GaAs quantum nanostructures on GaAs substrate by using molecular beam epitaxy with low growth temperature and slow growth rate typically results in a mixture of isolated and paired nano-stripe structures, which are termed as single and twin nano-stripes, respectively. In this work, we investigate the growth conditions to maximize the number ratio between twin and single nano-stripes. The highest percentage of the twin nano-stripes of up to 59% was achieved by optimizing the substrate temperature and the nano-stripe growth rate. Transmission electron microscopy reveals the substantial size and height reduction of the buried nano-stripes. We also observed the Raman shift and photon emission from our twin nano-stripes. These twin nano-stripes are promising for spintronics and quantum computing devices.

  3. Dietary glucose stimulus at larval stage modifies the carbohydrate metabolic pathway in gilthead seabream (Sparus aurata) juveniles: An in vivo approach using (14)C-starch.

    Science.gov (United States)

    Rocha, Filipa; Dias, Jorge; Geurden, Inge; Dinis, Maria Teresa; Panserat, Stephane; Engrola, Sofia

    2016-11-01

    The concept of nutritional programming was investigated in order to enhance the use of dietary carbohydrates in gilthead seabream juveniles. We assessed the long-term effects of high-glucose stimuli, exerted at the larval stage, on the growth performance, nutrient digestibility and metabolic utilization and gene expression of seabream juveniles, challenged with a high-carbohydrate intake. During early development, a group of larvae (control, CTRL) were kept under a rich-protein-lipid feeding regime whereas another group (GLU) was subjected to high-glucose stimuli, delivered intermittently over time. At juvenile stage, triplicate groups (IBW: 2.5g) from each fish nutritional background were fed a high-protein (59.4%) low-carbohydrate (2.0%) diet before being subjected to a low-protein (43.0%) high-carbohydrate (33.0%) dietary challenge for 36-days. Fish from both treatments increased by 8-fold their initial body weight, but neither growth rate, feed intake, feed and protein efficiency, nutrient retention (except lipids) nor whole-body composition were affected (P˃0.05) by fish early nutritional history. Nutrient digestibility was also similar among both groups. The metabolic fate of (14)C-starch and (14)C-amino acids tracers was estimated; GLU juveniles showed higher absorption of starch-derived glucose in the gut, suggesting an enhanced digestion of carbohydrates, while amino acid use was not affected. Moreover, glucose was less used for de novo synthesis of hepatic proteins and muscle glycogen from GLU fish (Pmetabolic data suggests that the early glucose stimuli may alter carbohydrate utilization in seabream juveniles. Copyright © 2016 Elsevier Inc. All rights reserved.

  4. Seasonal expression of arginine vasotocin mRNA and its correlations to gonadal steroidogenic enzymes and sexually dimorphic coloration during sex reversal in the gilthead seabream (Sparus aurata).

    Science.gov (United States)

    Reyes-Tomassini, José J; Wong, Ten-Tsao; Zohar, Yonathan

    2017-06-01

    Arginine vasotocin is a hormone produced in the hypothalamus of teleost fish that has been shown to regulate gonad development and sexual behavior. To study the role of arginine vasotocin in the gonadal cycle of the hermaphrodite gilthead seabream, Sparus aurata, we cloned the seabream arginine vasotocin (avt) complementary DNA (cDNA). We investigated the expression of brain avt throughout the gonad cycle using real-time quantitative PCR and compared its expression levels to the expression levels of two key gonadal steroidogenic enzymes, cyp19a1a and cyp11b2. In July, when the process of sex reversal is thought to begin, avt expression was elevated over the previous 2 months. Avt in the brain remained at or above the level of July until November then peaked again in December. There was no difference between males and females in the expression levels of brain avt throughout the year. However, only in ambisexual fish was the expression of the cyp19a1a gonadal aromatase correlated to the expression of avt in the brain. Cyp11b2 did not show any correlation to brain avt expression. We also found that females had more intense body coloration than males and that this intensity peaked prior to spawning. Avt expression and female coloration were positively correlated. The fact that brain avt expression was lowest during gonad quiescence, together with the observation of a correlation between brain avt with gonadal cyp19a1a and body coloration during that time suggests that avt may play a role during the process of sex reversal and spawning of the gilthead seabream.

  5. Distinguishing Patterns of Charge Order: Stripes or Checkerboards

    Energy Technology Data Exchange (ETDEWEB)

    Robertson, J.A.

    2010-04-06

    In two dimensions, quenched disorder always rounds transitions involving the breaking of spatial symmetries so, in practice, it can often be difficult to infer what form the symmetry breaking would take in the 'ideal,' zero disorder limit. We discuss methods of data analysis which can be useful for making such inferences, and apply them to the problem of determining whether the preferred order in the cuprates is 'stripes' or 'checkerboards.' In many cases we show that the experiments clearly indicate stripe order, while in others (where the observed correlation length is short), the answer is presently uncertain.

  6. Visual acuity in the striped skunk (Mephitis mephitis).

    Science.gov (United States)

    Johnson-Ulrich, Zoe; Hoffmaster, Eric; Robeson, Audrey; Vonk, Jennifer

    2017-11-01

    The visual acuity of striped skunks (Mephitis mephitis) was tested using a 2 alternative forced-choice task with square wave gratings. Skunks were reinforced with food items for touching a ball in front of a striped stimulus when paired with a ball in front of a solid gray stimulus. Skunks demonstrated a maximum visual acuity of 0.42 cycles per degree when tested with bright outdoor illumination. This poor visual acuity may be due to their nocturnal lifestyle, lack of predation, and is consistent with their preferential use of smell and sound during foraging. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

  7. Effects of mannan oligosaccharide and inulin on sharpsnout seabream (Diplodus puntazzo) in the context of partial fish meal substitution by soybean meal

    OpenAIRE

    Giovanni Piccolo; Gerardo Centoducati; Fulvia Bovera; Raffaele Marrone; Antonino Nizza

    2013-01-01

    One hundred forty-four sharpsnout seabream of about 100 g initial body weight were randomly stocked in 12 experiment tanks (180 L). Testing conditions included 12 fish per tank, with triplicate tanks for treatment. The experimental period lasted 150 days. Average water temperature was 21.9±1.6°C, salinity was 30.0‰ and pH ranged from 7 to 8, throughout the experiment. A control diet (FM) was made from fish meal. One similar diet (SBM) was made with approximately 40% of the protein supplied by...

  8. 32 CFR Appendix E to Part 246 - Stars and Stripes (S&S) Board of Directors

    Science.gov (United States)

    2010-07-01

    ... 32 National Defense 2 2010-07-01 2010-07-01 false Stars and Stripes (S&S) Board of Directors E... DEFENSE (CONTINUED) MISCELLANEOUS STARS AND STRIPES (S&S) NEWSPAPER AND BUSINESS OPERATIONS Pt. 246, App. E Appendix E to Part 246—Stars and Stripes (S&S) Board of Directors A. Organization and Management...

  9. Mapping of stripe rust resistance gene in an Aegilops caudata ...

    Indian Academy of Sciences (India)

    ... rust resistance depicted a single major gene conditioning adult plant resistance (APR) with stripe rust reaction varying from TR-20MS in resistant RILs signifying the presence of some minor genes as well. Genetic association with leaf rust resistance revealed that two genes are located at a recombination distance of 13%.

  10. Anatomical studies of the gastrointestinal tract of the striped sand ...

    African Journals Online (AJOL)

    A study was carried out on the gross anatomical, morphometric features and histology of the gastrointestinal tract of the Striped Sand Snake (Psammophis sibilans). Ten snakes (five males and five females) were euthanized and dissected for the study. The gastrointestinal tract appeared as a straight tubular organ from oral ...

  11. Stripe domains and magnetoresistance in thermally deposited nickel films

    International Nuclear Information System (INIS)

    Sparks, P.D.; Stern, N.P.; Snowden, D.S.; Kappus, B.A.; Checkelsky, J.G.; Harberger, S.S.; Fusello, A.M.; Eckert, J.C.

    2004-01-01

    We report a study of the domain structure and magnetoresistance of thermally deposited nickel films. For films thicker than 17 nm, we observe striped domains with period varying with film thickness as a power law with exponent 0.21±0.02 up to 120 nm thickness. There is a negative magnetoresistance for fields out of the plane

  12. Distribution patterns of striped mullet Mugil cephalus in mangrove ...

    African Journals Online (AJOL)

    Spatial and seasonal variations in density of striped mullet Mugil cephalus were investigated in four mangrove creeks in Zanzibar, Tanzania, during a one-year cycle. Fish were collected monthly in the lower, intermediate and upper reaches of each creek using a beach-seine net. All fish collected were juveniles between 2 ...

  13. Mapping of stripe rust resistance gene in an Aegilops caudata ...

    Indian Academy of Sciences (India)

    Artificial rust epidemic was created by spraying the infector rows and experimental material with the mixture of uredinospores of Pst isolates 78S84 and 46S119. Stripe rust assessment was according to the modified Cobb's scale. (Peterson et al. 1948). The RIL population was screened at the seedling stage against leaf rust ...

  14. Monitoring quantity and quality of striped catfish pond effluent

    NARCIS (Netherlands)

    Heijden, van der P.G.M.; Poelman, M.; Bosma, R.H.; Long, N.; Son, V.M.

    2012-01-01

    The production of striped catfish and other fish species in ponds has several possible impacts on the environment, one of which is caused by the discharge of pond waste water (effluent), which is enriched with nitrogen and phosphorous compounds as result of feeding and fish faeces. To restrict the

  15. Intervertebral Disk Disease in 3 Striped Skunks (Mephitis mephitis)

    NARCIS (Netherlands)

    Krauss, M.W.; Benato, L.; McDonnell, J.; Schoemaker, N.J.; Westerhof, I.; Bronson, E.; Gielen, I.; van Caelenberg, A.; Hellebuyck, T.; Meij, B.P.; de Decker, S.

    Objective To describe diagnostic findings, surgical technique, and outcome in 3 striped skunks (Mephitis mephitis) with a history of paraparesis. Study Design Case series. Animals Skunks (n = 3) with paraparesis. Methods Neurologic examination revealed upper motor neuron disease (T2–L2) in 2 skunks

  16. Modulation of the innate immune responses in the striped ...

    African Journals Online (AJOL)

    Thus, most of the innate non-specific immune responses are inducible though they are constitutive of fish immune system exhibiting a basal level of activity even in the absence of pathogen challenge. Keywords: Aeromonas hydrophila, Experimental challenge, Innate immune response, Striped snakehead murrel ...

  17. Siim Nestor soovitab : Supreme 7aastane. White Stripes / Siim Nestor

    Index Scriptorium Estoniae

    Nestor, Siim, 1974-

    2005-01-01

    Kolmik Supreme tähistab oma 7. tegutsemisaastat 24. juunil Von Krahlis, kus toimub ka Krecki debüütalbumi "If You Live" (väljaandjaks ettevõte Umblu) esitlus. Detroidi blues-rock duo White Stripes esitleb oma uut albumit "Get Behind Me Satan" 29. juunil Tallinnas klubis Hollywood

  18. Mapping of stripe rust resistance gene in an Aegilops caudata ...

    Indian Academy of Sciences (India)

    Genetic mapping indicated the introgression of stripe rust resistance gene on wheat chromosome. 5DS in the region carrying leaf rust resistance gene LrAc, but as an independent introgression. Simple sequence repeat (SSR) and sequence-tagged site (STS) markers designed from the survey sequence data of 5DS ...

  19. Assessment of gill pathological responses in the tropical fish yellowfin seabream of Persian Gulf under mercury exposure

    Directory of Open Access Journals (Sweden)

    Leila Hassaninezhad

    2014-01-01

    Full Text Available Gill histomorphological alterations were used to assess the effects of chronic exposure to HgCl2 on the yellowfin seabream, Acanthopagrus latus. In this regard, 90 A. latus were exposed to sublethal concentrations of HgCl2 (10, 20, 35 and 50 μg/L for 3 weeks. Treated fish were erratic and showed respiratory distress. The most common morphological abnormalities included: filaments disorganization, increase of mucus secretion, debris and blood plaques on the filaments, losing or shortening of some filaments. The most frequent histopathological changes detected in the gills included extensive lifting of the lamellar epithelium and edema of lamellae with enlarged sub-epithelial spaces, exfoliated epithelium of lamellae, telangiectasia, hypertrophy and hyperplasia of the epithelial cell resulted in partial fusion of the secondary lamellae and a reduction of the water space, club shaping of gill lamellae, blood congestion. Some more severe alternations found in the gill of fish exposed to higher levels of HgCl2 (35 and 50 μg/L included lamellar aneurysm and hemorrhages with rupture of the lamellar epithelium. According to the results of the present study, mercuric chloride could cause major histomorphological changes in the gill of A. latus, decreasing its gas exchange capability. Two mercury concentrations (10 and 20 μg/L used in the present study were in agreement with the concentration of mercury in the water of different parts of Mahshahr creeks (the north of Persian Gulf (3.66 to 15 μg/L. Therefore, based on the results the presence of pathological alteration in A. latus inhibited in the natural environment (Mahshahr creeks seems to be logical.

  20. Biotransformation modulation and genotoxicity in white seabream upon exposure to paralytic shellfish toxins produced by Gymnodinium catenatum.

    Science.gov (United States)

    Costa, Pedro Reis; Pereira, Patrícia; Guilherme, Sofia; Barata, Marisa; Nicolau, Lídia; Santos, Maria Ana; Pacheco, Mário; Pousão-Ferreira, Pedro

    2012-01-15

    Fish are recurrently exposed to paralytic shellfish toxins (PSTs) produced by Gymnodinium catenatum. Nevertheless, the knowledge regarding metabolism of PSTs and their toxic effects in fish is scarce. Consequently, the current study aims to investigate the role of phase I and II detoxification enzymes on PST metabolism in the liver of white seabream (Diplodus sargus), assessing ethoxyresorufin-O-deethylase (EROD) and glutathione S-transferase (GST) activities. Moreover, the genotoxic potential of PSTs was examined through the erythrocytic nuclear abnormality (ENA) assay. Fish were intracoelomically (IC) injected with a nominal dose (expressed as saxitoxin equivalents) of 1.60 μg STXeq kg⁻¹ semipurified from a G. catenatum cell culture with previously determined toxin profile. Fish were sacrificed 2 and 6 days after IC injection. PST levels determined in fish liver were 15.2 and 12.2 μg STXeq kg⁻¹, respectively, at 2 and 6 days after the injection. Though several PSTs were administered, only dcSTX was detected in the liver after 2 and 6 days. This was regarded as an evidence that most of the N-sulfocarbamoyl and decarbamoyl toxins were rapidly biotransformed in D. sargus liver and/or eliminated. This was corroborated by a hepatic GST activity induction at 2 days after injection. Hepatic EROD activity was unresponsive to PSTs, suggesting that these toxins enter phase II of biotransformation directly. The genotoxic potential of PSTs was also demonstrated; these toxins were able to induce cytogenetic damage, such as chromosome (or chromatid) breaks or loss and segregational anomalies, measured by the ENA assay. Overall, this study pointed out the ecological risk associated with the contamination of fish with PSTs generated by G. catenatum blooms, providing the necessary first data for a proper interpretation of biomonitoring programs aiming to assess the impact of phytoplankton blooms in fish. Copyright © 2011 Elsevier B.V. All rights reserved.

  1. Biotransformation modulation and genotoxicity in white seabream upon exposure to paralytic shellfish toxins produced by Gymnodinium catenatum

    International Nuclear Information System (INIS)

    Reis Costa, Pedro; Pereira, Patrícia; Guilherme, Sofia; Barata, Marisa; Nicolau, Lídia; Santos, Maria Ana; Pacheco, Mário; Pousão-Ferreira, Pedro

    2012-01-01

    Fish are recurrently exposed to paralytic shellfish toxins (PSTs) produced by Gymnodinium catenatum. Nevertheless, the knowledge regarding metabolism of PSTs and their toxic effects in fish is scarce. Consequently, the current study aims to investigate the role of phase I and II detoxification enzymes on PST metabolism in the liver of white seabream (Diplodus sargus), assessing ethoxyresorufin-O-deethylase (EROD) and glutathione S-transferase (GST) activities. Moreover, the genotoxic potential of PSTs was examined through the erythrocytic nuclear abnormality (ENA) assay. Fish were intracoelomically (IC) injected with a nominal dose (expressed as saxitoxin equivalents) of 1.60 μg STXeq kg −1 semipurified from a G. catenatum cell culture with previously determined toxin profile. Fish were sacrificed 2 and 6 days after IC injection. PST levels determined in fish liver were15.2 and 12.2 μg STXeq kg −1 , respectively, at 2 and 6 days after the injection. Though several PSTs were administered, only dcSTX was detected in the liver after 2 and 6 days. This was regarded as an evidence that most of the N-sulfocarbamoyl and decarbamoyl toxins were rapidly biotransformed in D. sargus liver and/or eliminated. This was corroborated by a hepatic GST activity induction at 2 days after injection. Hepatic EROD activity was unresponsive to PSTs, suggesting that these toxins enter phase II of biotransformation directly. The genotoxic potential of PSTs was also demonstrated; these toxins were able to induce cytogenetic damage, such as chromosome (or chromatid) breaks or loss and segregational anomalies, measured by the ENA assay. Overall, this study pointed out the ecological risk associated with the contamination of fish with PSTs generated by G. catenatum blooms, providing the necessary first data for a proper interpretation of biomonitoring programs aiming to assess the impact of phytoplankton blooms in fish.

  2. Biotransformation modulation and genotoxicity in white seabream upon exposure to paralytic shellfish toxins produced by Gymnodinium catenatum

    Energy Technology Data Exchange (ETDEWEB)

    Reis Costa, Pedro, E-mail: prcosta@ipimar.pt [IPIMAR - National Institute for Biological Resources (INRB/IPIMAR), Av. Brasilia, 1449-006 Lisboa (Portugal); Pereira, Patricia [IPIMAR - National Institute for Biological Resources (INRB/IPIMAR), Av. Brasilia, 1449-006 Lisboa (Portugal); Department of Biology and CESAM, Aveiro University, Campus Universitario de Santiago, 3810-193 Aveiro (Portugal); Guilherme, Sofia [Department of Biology and CESAM, Aveiro University, Campus Universitario de Santiago, 3810-193 Aveiro (Portugal); Barata, Marisa; Nicolau, Lidia [IPIMAR - National Institute for Biological Resources (INRB/IPIMAR), Av. 5 Outubro, 8700-305 Olhao (Portugal); Santos, Maria Ana; Pacheco, Mario [Department of Biology and CESAM, Aveiro University, Campus Universitario de Santiago, 3810-193 Aveiro (Portugal); Pousao-Ferreira, Pedro [IPIMAR - National Institute for Biological Resources (INRB/IPIMAR), Av. 5 Outubro, 8700-305 Olhao (Portugal)

    2012-01-15

    Fish are recurrently exposed to paralytic shellfish toxins (PSTs) produced by Gymnodinium catenatum. Nevertheless, the knowledge regarding metabolism of PSTs and their toxic effects in fish is scarce. Consequently, the current study aims to investigate the role of phase I and II detoxification enzymes on PST metabolism in the liver of white seabream (Diplodus sargus), assessing ethoxyresorufin-O-deethylase (EROD) and glutathione S-transferase (GST) activities. Moreover, the genotoxic potential of PSTs was examined through the erythrocytic nuclear abnormality (ENA) assay. Fish were intracoelomically (IC) injected with a nominal dose (expressed as saxitoxin equivalents) of 1.60 {mu}g STXeq kg{sup -1} semipurified from a G. catenatum cell culture with previously determined toxin profile. Fish were sacrificed 2 and 6 days after IC injection. PST levels determined in fish liver were15.2 and 12.2 {mu}g STXeq kg{sup -1}, respectively, at 2 and 6 days after the injection. Though several PSTs were administered, only dcSTX was detected in the liver after 2 and 6 days. This was regarded as an evidence that most of the N-sulfocarbamoyl and decarbamoyl toxins were rapidly biotransformed in D. sargus liver and/or eliminated. This was corroborated by a hepatic GST activity induction at 2 days after injection. Hepatic EROD activity was unresponsive to PSTs, suggesting that these toxins enter phase II of biotransformation directly. The genotoxic potential of PSTs was also demonstrated; these toxins were able to induce cytogenetic damage, such as chromosome (or chromatid) breaks or loss and segregational anomalies, measured by the ENA assay. Overall, this study pointed out the ecological risk associated with the contamination of fish with PSTs generated by G. catenatum blooms, providing the necessary first data for a proper interpretation of biomonitoring programs aiming to assess the impact of phytoplankton blooms in fish.

  3. Tissue-specific changes in OGG1 and SOD mRNA expression caused by NaOCl exposure in black seabream ( Acanthopagrus schlegelii)

    Science.gov (United States)

    Park, Ho-Ra; Kim, Yong; Yeo, Won-Jun; Kim, Ji-Hye; Han, Kyung-Nam

    2017-09-01

    The DNA-damage defense mechanism was studied in black seabreams after oxidative stress caused by exposure to sodium hypochlorite (NaOCl). Liver, muscle, and brain tissues were obtained after different NaOCl-exposure times (0, 24, 48, 72, and 96 h) and concentrations (0.5, 1, 1.5, 2, and 3 mg/L), after which oxoguanine glycosylase (OGG1) and superoxide dismutase (SOD) mRNA-expression levels were analyzed. At all NaOCl concentrations tested, liver OGG1 expression increased to a maximum in a time-dependent manner after NaOCl exposure and then decreased. In muscles, OGG1 expression increased over time following exposure to a low concentration of NaOCl (0.5, 1, and 1.5 mg/L), whereas it showed a mixed pattern (both increases and decreases observed) in the high-concentration groups (2 and 3 mg/L). SOD mRNA expression increased over time, both in the liver and muscles. In the brain, both OGG1 and SOD mRNA expression levels were highest after exposure to the lowest NaOCl concentration (0.5 mg/L), whereas basal levels were maintained over time at higher concentrations. These results indicate that OGG1 and SOD provide resistance to oxidative stress in black seabreams. In addition, continuous exposure to oxidative stress can suppress enzyme expression, suggesting a risk for long-term exposure to NaOCl.

  4. Distinct Nature of Static and Dynamic Magnetic Stripes in Cuprate Superconductors

    Science.gov (United States)

    Jacobsen, H.; Holm, S. L.; Lǎcǎtuşu, M.-E.; Rømer, A. T.; Bertelsen, M.; Boehm, M.; Toft-Petersen, R.; Grivel, J.-C.; Emery, S. B.; Udby, L.; Wells, B. O.; Lefmann, K.

    2018-01-01

    We present detailed neutron scattering studies of the static and dynamic stripes in an optimally doped high-temperature superconductor, La2 CuO4 +y . We observe that the dynamic stripes do not disperse towards the static stripes in the limit of vanishing energy transfer. Therefore, the dynamic stripes observed in neutron scattering experiments are not the Goldstone modes associated with the broken symmetry of the simultaneously observed static stripes, and the signals originate from different domains in the sample. These observations support real-space electronic phase separation in the crystal, where the static stripes in one phase are pinned versions of the dynamic stripes in the other, having slightly different periods. Our results explain earlier observations of unusual dispersions in underdoped La2 -xSrx CuO4 (x =0.07 ) and La2 -xBax CuO4 (x =0.095 ).

  5. Distinct Nature of Static and Dynamic Magnetic Stripes in Cuprate Superconductors

    DEFF Research Database (Denmark)

    Jacobsen, H.; Holm, S. L.; Lăcătuşu, M. E.

    2018-01-01

    We present detailed neutron scattering studies of the static and dynamic stripes in an optimally doped high-Temperature superconductor, La2CuO4+y. We observe that the dynamic stripes do not disperse towards the static stripes in the limit of vanishing energy transfer. Therefore, the dynamic stripes...... observed in neutron scattering experiments are not the Goldstone modes associated with the broken symmetry of the simultaneously observed static stripes, and the signals originate from different domains in the sample. These observations support real-space electronic phase separation in the crystal, where...... the static stripes in one phase are pinned versions of the dynamic stripes in the other, having slightly different periods. Our results explain earlier observations of unusual dispersions in underdoped La2-xSrxCuO4 (x=0.07) and La2-xBaxCuO4 (x=0.095)....

  6. Bulk temperature measurement in thermally striped pipe flows

    International Nuclear Information System (INIS)

    Lemure, N.; Olvera, J.R.; Ruggles, A.E.

    1995-12-01

    The hot leg flows in some Pressurized Water Reactor (PWR) designs have a temperature distribution across the pipe cross-section. This condition is often referred to as a thermally striped flow. Here, the bulk temperature measurement of pipe flows with thermal striping is explored. An experiment is conducted to examine the feasibility of using temperature measurements on the external surface of the pipe to estimate the bulk temperature of the flow. Simple mixing models are used to characterize the development of the temperature profile in the flow. Simple averaging techniques and Backward Propagating Neural Net are used to predict bulk temperature from the external temperature measurements. Accurate bulk temperatures can be predicted. However, some temperature distributions in the flow effectively mask the bulk temperature from the wall and cause significant error in the bulk temperature predicted using this technique

  7. Striped bass stocks and concentrations of polychlorinated biphenyls

    Science.gov (United States)

    Fabrizio, Mary C.; Sloan, Ronald J.; O'Brien, John F.

    1991-01-01

    Harvest restrictions on striped bass Morone saxatilis fisheries in Atlantic coastal states were relaxed in 1990, but consistent, coastwide regulations of the harvest have been difficult to implement because of the mixed-stock nature of the fisheries and the recognized contamination of Hudson River fish by polychlorinated biphenyls (PCBs). We examined PCB concentrations and stock of origin of coastal striped bass to better understand the effects of these two factors on the composition of the harvest. The probability of observing differences in PCB concentration among fish from the Hudson River stock and the 'southern' group (Chesapeake Bay and Roanoke River stocks combined) was investigated with the logit model (a linear model for analysis of categorical data). Although total PCB concentrations were highly variable among fish from the two groups, striped bass classified as Hudson River stock had a significantly greater probability of having PCB concentrations equal to or greater than 2.00 mg/kg than did fish belonging to the southern group for all age- and size-classes examined. There was a significantly greater probability of observing total PCB concentrations equal to or exceeding 2.00 mg/kg in fish that were 5, 6, and 7 or more years old, and this probability increased linearly with age. We observed similar results when we examined the effect of size on total PCB concentration. The minimum-size limit estimated to permit escapement of fish to sustain stock production is 610 mm total length. Unless total PCB concentrations decrease in striped bass, it is likely that many harvestable fish will have concentrations that exceed the tolerance limit set by the U.S. Food and Drug Administration.

  8. Charge stripes and spin correlations in copper-oxide superconductors

    OpenAIRE

    Tranquada, J. M.

    1997-01-01

    Recent neutron diffraction studies have yielded evidence that, in a particular cuprate family, holes doped into the CuO(2) planes segregate into stripes that separate antiferromagnetic domains. Here it is shown that such a picture provides a quantitatively consistent interpretation of the spin fluctuations measured by neutron scattering in La(1.85)Sr(0.15)CuO(4) and YBa(2)Cu(3)O(6+x).

  9. Effect of feeding frequency on the daily rhythms of acidic digestion in a teleost fish (gilthead seabream).

    Science.gov (United States)

    Yúfera, Manuel; Romero, María José; Pujante, Isabel M; Astola, Antonio; Mancera, Juan Miguel; Sánchez-Vázquez, F J; Moyano, Francisco Javier; Martínez-Rodríguez, Gonzalo

    2014-11-01

    Gilthead seabream is a fish species of great importance in Mediterranean aquaculture, attracting many studies on nutrition and chronobiology, although nothing is known about the effect of feeding frequency on the daily rhythms of the gastric digestion process. In this article, we investigated daily rhythms in stomach fullness, gastric and intestine pH, as well as pepsin activity and expression of pepsinogen and proton pump in juvenile fish under three different feeding protocols: (A) one daily meal at 9:00, (B) two daily meals at 9:00 and 17:00 and (C) continuous feeding during the daytime. The results revealed that feeding protocol affected significantly the rhythm of gastric pH and the pepsin activity pattern. The gastric pH exhibited significant daily rhythms in the three cases with the acrophase located at night in the regimes A and B and during daytime, in the regime C. In the regimes A and B, the pepsin activity peaked few hours after the meals, although the afternoon meal in B produced a higher peak. In the regime C, the peak occurred in the middle of the feeding period. Lowest total pepsin activity was observed in regime A, and the highest activity with the regime C. In contrast, the pepsinogen gene expression remained low along the daily cycle, with an expression peak just before or after the morning meal in regimes A and C, respectively. The proton pump gene expression was also practically constant with a peak right after the morning meal in the regime C. On the other hand, intestinal pH showed a postprandial increase after the first morning meal in all the three treatments, recovering the resting values in the dark period. Two meals and continuous feeding allowed a better and prolonged gastric digestion and consequently the juveniles exhibited better growth with the same daily ration of food. In short, while the gastric digestion pattern is mainly driven by pH changes induced by the time of food ingestion, the regulation of the intestinal digestion seems

  10. Inheritance of skeletal deformities in gilthead seabream (Sparus aurata) - lack of operculum, lordosis, vertebral fusion and LSK complex.

    Science.gov (United States)

    Negrín-Báez, D; Navarro, A; Lee-Montero, I; Soula, M; Afonso, J M; Zamorano, M J

    2015-01-01

    Morphological abnormalities in farmed gilthead seabream (Sparus aurata) are a major problem as it entails significant economic losses. In this study, 3 large scale experiments under different conditions of spawning, offspring handling and breeders phenotype were performed to analyze the inheritance of 4 types of deformities in this species: lack of operculum, lordosis, vertebral fusion, which are 3 of the most important skeletal deformities, and LSK, which is a consecutive repetition of lordosis/scoliosis/kyphosis. In Exp. [1] (mass spawning and fingerling sorting), 900 fish were analyzed at 509 d post-hatching: 846 fish that had been on-grown in a farm and 54 LSK-deformed fish that had been reared separately after being selected during the fingerling sorting process. A total of 89 families were represented. A statistically significant association between 5 of these families (from 6 breeders) and LSK-deformed fish was found. In Exp. [2] (mass spawning and no fingerling sorting), 810 fish were analyzed at 2 ages: 179 and 689 d post-hatching. Significant relationships between 2 of the breeders and 2 of the families with the lack of operculum prevalence of their descendants were found at 689 d but not at 179 d. Heritabilities: 0.09 ± 0.09 at 179 d and 0.17 ± 0.08 at 689 d. Column deformities prevalence was low and no association with family was observed. Family relationships were determined by microsatellites multiplex PCR in both experiments. In Exp. [3] (designed mating), sires suffering from lordosis or lack of operculum or vertebral fusion deformities were mated with non-deformed dams and a mass-spawning mating was considered as a control. After analyzing 11,503 offspring at 159 d post-hatching, a significant relationship between each deformity prevalence and the mating of breeders suffering from the same deformity was observed. In addition, a significant prevalence of lack of operculum in offspring from lordotic matings was observed. Heritabilities ranged from

  11. Increases in immune parameters by inulin and Bacillus subtilis dietary administration to gilthead seabream (Sparus aurata L.) did not correlate with disease resistance to Photobacterium damselae.

    Science.gov (United States)

    Cerezuela, Rebeca; Guardiola, Francisco A; Meseguer, José; Esteban, M Ángeles

    2012-06-01

    The present work evaluates the effects of inulin and Bacillus subtilis, single or combined, on immune parameters, immune-related gene expression and protection against Photobacterium damselae subsp. piscicida in gilthead seabream (Sparus aurata). Three trials were conducted. In the first trial, different concentrations of inulin (10, 15 and 30 g kg(-1)) (as a prebiotic) were administered to determine the optimal concentration for stimulating the seabream's immune system. In the second trial, the optimum concentration of inulin (10 g kg(-1)) was combined with B. subtilis (as a probiotic). Following two and four weeks of the treatment, the main immune parameters, as well as the expression of seven immune-related genes, were measured. In the final trial, fish fed the same diet as in the second trial were challenged intraperitoneally with P. damselae subsp. piscicida (10(9) cfu g(-1)). Treatment groups for the second and third trial were control (non-supplemented diet), inulin (10 g kg(-1)), B. subtilis (10(7) cfu g(-1)) and inulin + B. subtilis (10 g kg(-1) and 10(7) cfu g(-1) respectively). Dietary administration of inulin or B. subtilis for two weeks stimulated the serum complement activity and the IgM level, as well as leucocyte phagocytic activity; furthermore, inulin stimulated leucocyte respiratory burst activity. When inulin and B. subtilis were administered together (as a synbiotic), only the serum complement activity and the IgM level increased in a statistically significant manner. Furthermore, the complement activity showed a significant increase in fish fed the three experimental diets for four weeks. The challenge experiment showed that the fish fed inulin or the synbiotic diet had non-significantly lower or significantly higher cumulative mortality, respectively, compared with the control group (non-supplemented diet). These results suggest that inulin and B. subtilis modulate the immune response of the gilthead seabream, although the combined

  12. Testicular involution prior to sex change in gilthead seabream is characterized by a decrease in DMRT1 gene expression and by massive leukocyte infiltration

    Directory of Open Access Journals (Sweden)

    Meseguer José

    2007-06-01

    Full Text Available Abstract Background Leukocytes are found within the testis of most, if not all, mammals and are involved in immunological surveillance, physiological regulation and tissue remodelling. The testis of seasonal breeding fish undergoes a regression process. In the present study, the second reproductive cycle (RC of the protandrous seasonal teleost fish, gilthead seabream, was investigated and the presence of leukocytes analysed. Special attention has been paid to the testicular degenerative process which is particularly active in the last stage of the second RC probably due to the immediacy of the sex change process. Methods Sexually mature specimens (n = 10–18 fish/month were sampled during the second RC. Some specimens were intraperitoneally injected with bromodeoxyuridin (BrdU before sampling. Light and electron microscopy was used to determine the different stages of gonadal development and the presence of leukocytes and PCR was used to analyse the gene expression of a testis-differentiating gene and of specific markers for macrophages and B and T lymphocytes. Immunocytochemistry and flow cytometry were performed using a specific antibody against acidophilic granulocytes from the gilthead seabream. Cell proliferation was detected by immunocytochemistry using an anti-BrdU antibody and apoptotic cells by in situ detection of DNA fragmentation. Results The fish in the western Mediterranean area developed as males during the first two RCs. The testis of all the specimens during the second RC underwent a degenerative process, which started at post-spawning and was enhanced during the testicular involution stage, when vitellogenic oocytes appeared in the ovary accompanied by a progressive increase in the ovarian index. However, only 40% of specimens were females in the third RC. Leukocytes (acidophilic granulocytes, macrophages and lymphocytes were present in the gonad and acidophilic granulocyte infiltration occurred during the last two stages. At

  13. Disorder induced stripes in d-wave superconductors

    Science.gov (United States)

    Schmid, Markus; Loder, Florian; Kampf, Arno P.; Kopp, Thilo

    2013-07-01

    Stripe phases are observed experimentally in several copper-based high-Tc superconductors near 1/8 hole doping. However, the specific characteristics may vary depending on the degree of dopant disorder and the presence or absence of a low-temperature tetragonal phase. On the basis of a Hartree-Fock decoupling scheme for the t-J model, we discuss the diverse behavior of stripe phases. In particular, the effect of inhomogeneities is investigated in two distinctly different parameter regimes which are characterized by the strength of the interaction. We observe that small concentrations of impurities or vortices pin the unidirectional density waves, and dopant disorder is capable of stabilizing a stripe phase in parameter regimes where homogeneous phases are typically favored in clean systems. The momentum-space results exhibit universal features for all coexisting density-wave solutions, nearly unchanged even in strongly disordered systems. These coexisting solutions feature generically a full energy gap and a particle-hole asymmetry in the density of states.

  14. Survey of cardiac pathologies in captive striped skunks (Mephitis mephitis).

    Science.gov (United States)

    Benato, Livia; Wack, Allison; Cerveny, Shannon N S; Rosenthal, Steven L; Bronson, Ellen

    2014-06-01

    Cardiac disease is a common finding in small mammals but it is rarely reported in striped skunks (Mephitis mephitis). The aim of this survey was to evaluate the prevalence of cardiac disease in striped skunks and to characterize the types of cardiac disease that might be present. In April 2010, a questionnaire was sent to veterinarians in zoologic collections with membership in the International Species Inventory System. Surveys were distributed to 55 institutions in the United States, Canada, and Europe. Twenty collections with a total of 95 skunks replied to the questionnaire. Of these, five collections reported at least one skunk with cardiac conditions for a total of 11 cases. In these 11 animals, the following conditions were diagnosed: myocardial fibrosis (n = 4), myxomatous valve degeneration (n = 4), hypertrophic cardiomyopathy (n = 1), dilated cardiomyopathy (n = 1), and valvular endocarditis (n = 1). Based on these findings, cardiac diseases should be considered as part of the differential diagnosis in captive striped skunks presenting with weakness, lethargy, and decreased appetite. Cardiac ultrasound also should be considered at the time of annual health examinations to evaluate for possible cardiac conditions at an early stage.

  15. Ultrafast charge localization in a stripe-phase nickelate

    Energy Technology Data Exchange (ETDEWEB)

    Coslovich, Giacomo; Huber, Bernhard; Lee, Wei-Sheng; Sasagawa, Takao; Hussain, Zahid; Bechtel, Hans A.; Martin, Michael C.; Shen, Zhi-Xun; W. Schoenlein, Robert; A. Kaindl, Robert

    2013-08-30

    Self-organized electronically-ordered phases are a recurring feature in correlated materials, resulting in e.g. fluctuating charge stripes whose role in high-Tc superconductivity is under debate. However, the relevant cause-effect relations between real-space charge correlations and low-energy excitations remain hidden in time-averaged studies. Here, we reveal ultrafast charge localization and lattice vibrational coupling as dynamical precursors of stripe formation in the model compound La1.75Sr0.25NiO4, using ultrafast and equilibrium mid-infrared spectroscopy. The opening of a pseudogap at a crossover temperature T* far above long-range stripe formation establishes the onset of electronic localization which is accompanied by an enhanced Fano asymmetry of Ni-O stretch vibrations. Ultrafast excitation triggers a sub-picosecond dynamics exposing the synchronous modulation of electron-phonon coupling and charge localization. These results illuminate the role of localization in forming the pseudogap in nickelates, opening a path to understanding this mysterious phase in a broad class of complex oxides.

  16. NATURAL TRANSVERSE VIBRATIONS OF A PRESTRESSED ORTHOTROPIC PLATE-STRIPE

    Directory of Open Access Journals (Sweden)

    Egorychev Oleg Aleksandrovich

    2012-10-01

    Full Text Available The article represents a new outlook at the boundary-value problem of natural vibrations of a homogeneous pre-stressed orthotropic plate-stripe. In the paper, the motion equation represents a new approximate hyperbolic equation (rather than a parabolic equation used in the majority of papers covering the same problem describing the vibration of a homogeneous orthotropic plate-stripe. The proposed research is based on newly derived boundary conditions describing the pin-edge, rigid, and elastic (vertical types of fixing, as well as the boundary conditions applicable to the unfixed edge of the plate. The paper contemplates the application of the Laplace transformation and a non-standard representation of a homogeneous differential equation with fixed factors. The article proposes a detailed representation of the problem of natural vibrations of a homogeneous orthotropic plate-stripe if rigidly fixed at opposite sides; besides, the article also provides frequency equations (no conclusions describing the plate characterized by the following boundary conditions: rigid fixing at one side and pin-edge fixing at the opposite side; pin-edge fixing at one side and free (unfixed other side; rigid fixing at one side and elastic fixing at the other side. The results described in the article may be helpful if applied in the construction sector whenever flat structural elements are considered. Moreover, specialists in solid mechanics and theory of elasticity may benefit from the ideas proposed in the article.

  17. The STRIPES Trial - Support to Rural India's Public Education System

    Science.gov (United States)

    2010-01-01

    Background Performance of primary school students in India lags far below government expectations, and major disparity exists between rural and urban areas. The Naandi Foundation has designed and implemented a programme using community members to deliver after-school academic support for children in over 1,100 schools in five Indian states. Assessments to date suggest that it might have a substantial effect. This trial aims to evaluate the impact of this programme in villages of rural Andhra Pradesh and will compare test scores for children in three arms: a control and two intervention arms. In both intervention arms additional after-school instruction and learning materials will be offered to all eligible children and in one arm girls will also receive an additional 'kit' with a uniform and clothes. Methods/Design The trial is a cluster-randomised controlled trial conducted in conjunction with the CHAMPION trial. In the CHAMPION trial 464 villages were randomised so that half receive health interventions aiming to reduce neonatal mortality. STRIPES will be introduced in those CHAMPION villages which have a public primary school attended by at least 15 students at the time of a baseline test in 2008. 214 villages of the 464 were found to fulfil above criteria, 107 belonging to the control and 107 to the intervention arm of the CHAMPION trial. These latter 107 villages will serve as control villages in the STRIPES trial. A further randomisation will be carried out within the 107 STRIPES intervention villages allocating half to receive an additional kit for girls on the top of the instruction and learning materials. The primary outcome of the trial is a composite maths and language test score. Discussion The study is designed to measure (i) whether the educational intervention affects the exam score of children compared to the control arm, (ii) if the exam scores of girls who receive the additional kit are different from those of girls living in the other STRIPES

  18. Microwave permeability of stripe patterned FeCoN thin film

    International Nuclear Information System (INIS)

    Wu, Yuping; Yang, Yong; Ma, Fusheng; Zong, Baoyu; Yang, Zhihong; Ding, Jun

    2017-01-01

    Magnetic stripe patterns are of great importance for microwave applications owing to their highly tunable microwave permeability by adjusting the geometrical dimensions. In this work, stripe patterned FeCoN films with 160 nm thickness are fabricated by using standard UV photolithography. Their microwave permeability are investigated systematically via both experiment and micromagnetic simulation. The good agreement between experimental and simulation results suggests that stripe width is crucial for the microwave magnetic properties of the stripe pattern. It is demonstrated by simulation that with increasing stripe width from 1 to 80 µm the initial permeability shows a continuous growth from about 8–322, whiles the resonance frequency drops dramatically from 18.7 to 3.1 GHz at 4 µm gap size. Smaller gap size would result in slightly increased initial permeability due to larger magnetic volume ratio, accompanied by decreased resonance frequency because of stronger magnetostatic interaction. Moreover, the experimental investigation on stripe length effect indicates that the stripe length should be kept as long as possible to achieve uniform bulk resonance mode and high permeability value. Insufficient stripe length would result in low frequency edge mode and decayed bulk mode. This study could provide valuable guidelines on the selection of proper geometry dimensions of FeCoN stripe patterns for high frequency applications. - Highlights: • This work presents a systematic study on permeability of FeCoN stripe pattern. • Geometrical parameters of the stripe pattern are systematically optimized. • Several important conclusions has been obtained. • The results offer guideline on FeCoN stripe patterns for high frequency applications.

  19. Microwave permeability of stripe patterned FeCoN thin film

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Yuping [Temasek Laboratories, National University of Singapore, 5A Engineering Drive 1, Singapore 117411 (Singapore); Yang, Yong, E-mail: tslyayo@nus.edu.sg [Temasek Laboratories, National University of Singapore, 5A Engineering Drive 1, Singapore 117411 (Singapore); Ma, Fusheng; Zong, Baoyu; Yang, Zhihong [Temasek Laboratories, National University of Singapore, 5A Engineering Drive 1, Singapore 117411 (Singapore); Ding, Jun [Department of Materials Science and Engineering, National University of Singapore, Singapore 117574 (Singapore)

    2017-03-15

    Magnetic stripe patterns are of great importance for microwave applications owing to their highly tunable microwave permeability by adjusting the geometrical dimensions. In this work, stripe patterned FeCoN films with 160 nm thickness are fabricated by using standard UV photolithography. Their microwave permeability are investigated systematically via both experiment and micromagnetic simulation. The good agreement between experimental and simulation results suggests that stripe width is crucial for the microwave magnetic properties of the stripe pattern. It is demonstrated by simulation that with increasing stripe width from 1 to 80 µm the initial permeability shows a continuous growth from about 8–322, whiles the resonance frequency drops dramatically from 18.7 to 3.1 GHz at 4 µm gap size. Smaller gap size would result in slightly increased initial permeability due to larger magnetic volume ratio, accompanied by decreased resonance frequency because of stronger magnetostatic interaction. Moreover, the experimental investigation on stripe length effect indicates that the stripe length should be kept as long as possible to achieve uniform bulk resonance mode and high permeability value. Insufficient stripe length would result in low frequency edge mode and decayed bulk mode. This study could provide valuable guidelines on the selection of proper geometry dimensions of FeCoN stripe patterns for high frequency applications. - Highlights: • This work presents a systematic study on permeability of FeCoN stripe pattern. • Geometrical parameters of the stripe pattern are systematically optimized. • Several important conclusions has been obtained. • The results offer guideline on FeCoN stripe patterns for high frequency applications.

  20. A Content Analysis Comparison between Stars and Stripes and Commercial National Newspapers

    Science.gov (United States)

    1990-01-01

    McQuail , Mass Communication Theory , (London: Sage Publications, 1983) 126. 15 He notes that some of the concerns... Communication Theory . London: SAGE Publications, 1983. " S & S Ombudsman’E Plan Draws Fire," European Stars and Stripes, 4 February 1990. "Stars and Stripes May...STRIPES AND COMMERCIAL NATIONAL NEWSPAPERS A THESIS APPROVED FOR THE DEPARTMENT OF JOURNALISM AND MASS COMMUNICATION By Shirley Rafey Bruce Hinson

  1. Effects of dietary supplementation with fenugreek seeds, alone or in combination with probiotics, on gilthead seabream (Sparus aurata L.) skin mucosal immunity.

    Science.gov (United States)

    Guardiola, F A; Bahi, A; Bakhrouf, A; Esteban, M A

    2017-06-01

    Despite increasing interest in modulating the immune response of fish, providing a combination of probiotics and herbal immunostimulants in aquafeed has rarely has been studied. The effects on gilthead seabream (Sparus aurata L.) of the dietary administration of fenugreek (Trigonella foenum graecum) seeds alone (FE), or combined with one of the following probiotic strains: Bacillus licheniformis (FEBL), Lactobacillus plantarum (FELP) or Bacillus subtilis (FEBS) were evaluated. Fish were fed a control or one of the supplemented diets for 3 weeks. After 2 and 3 weeks of the feeding trial, the abundance of terminal carbohydrates, IgM levels, enzymatic activities (proteases, alkaline phosphatase, esterase and ceruloplasmin) and bactericidal activity were determined in skin mucus. Our results demonstrated that the dietary administration of FE in combination with L. plantarum, particularly, increased carbohydrate abundance, the activity of certain enzymes such as ceruloplasmin, and bactericidal activity against the pathogenic bacterium Photobacterium damselae and the non-pathogenic bacterium B. subtilis in skin mucus at the end of the trial. The carbohydrates most affected by the FELP diet were mannose/glucose, N-acetyl-d-galactosamine and N-acetyl-β-d-glucosamine. Interestingly, IgM levels were significantly higher in fish fed the FELP and FEBS diets whilst protease activity generally increased in all supplemented diets, which could suggests that the main effect in this activity was to the result of FE supplementation although that fact cannot be confirmed because the effects of probiotics addition alone were not studied. These results suggest that the combined dietary administration of fenugreek and L. plantarum will best enhance the skin mucosal immunity response of gilthead seabream. Copyright © 2017 Elsevier Ltd. All rights reserved.

  2. Relationship of Soil Properties and Sugarcane Yields to Red Stripe in Louisiana.

    Science.gov (United States)

    Johnson, Richard M; Grisham, Michael P; Warnke, Kathryn Z; Maggio, Jeri R

    2016-07-01

    Symptoms of red stripe disease caused by Acidovorax avenae subsp. avenae in Louisiana between 1985 and 2010 were limited to the leaf stripe form, which caused no apparent yield loss. During 2010, the more severe top rot form was observed, and a study was initiated to investigate the distribution of red stripe in the field and determine its effects on cane and sugar yields. Soil properties data, red stripe incidence, and sugarcane yields were all highly variable and were not randomly distributed in the field. Combined harvest data showed a negative correlation between yield components and red stripe incidence, with the strongest relationship between sucrose per metric ton and disease incidence. Red stripe incidence was positively correlated with several soil properties, including phosphorus, potassium, zinc, and calcium. Red stripe incidence also was found to increase with increasing nitrogen rate, with the greatest effects in heavy soils. Results also indicated that using red-stripe-infected cane as a seed source can significantly decrease shoot emergence, stalk population, and subsequent cane and sugar yields. These combined data suggest that red stripe disease can exhibit a highly variable rate of infection in commercial sugarcane fields and may also significantly decrease sugar yields.

  3. Microsatellite markers linked to the locus of the watermelon fruit stripe pattern.

    Science.gov (United States)

    Gama, R N C S; Santos, C A F; Dias, R C S; Alves, J C S F; Nogueira, T O

    2015-01-16

    Agronomic performance and external and internal appearance of watermelon (Citrullus lanatus) fruit are important traits that should be taken into consideration during the development of a new cultivar, as well as being the principal identification elements used by the consumer, which are based on the external appearance and quality of the fruit. Externally, the fruit can be characterized in terms of the shape, the color of the lower rind, and the presence of grooves and stripes, the stripes can be classified as clearly defined or diffuse. The objective of this study was to identify microsatellite markers linked to the stripe pattern of watermelon fruit to support watermelon improvement programs, with the selection of this characteristic in the plantlet stage. F1 and F2 populations, result of a cross between the cultivars BRS Opara (clearly defined stripes) and Pérola (diffuse stripes), were phenotyped for their fruit stripe pattern. The CTAB 2X protocol was used for DNA extraction and 116 microsatellite markers were examined in a group of F2 plants that had fruit with well-defined stripes and fruit with diffuse stripes. The microsatellite loci MCPI_05 and MCPI_16 exhibited a linkage to the stripe pattern at a distance of 1.5 and 1.8 cM, respectively, with LOD scores of 39.28 and 38.11, respectively, which were located on chromosome six of the watermelon genome. These markers can be used in marker-assisted selection in watermelon improvement programs, by various research institutions.

  4. Physical Localization of a Locus from Agropyron cristatum Conferring Resistance to Stripe Rust in Common Wheat.

    Science.gov (United States)

    Zhang, Zhi; Song, Liqiang; Han, Haiming; Zhou, Shenghui; Zhang, Jinpeng; Yang, Xinming; Li, Xiuquan; Liu, Weihua; Li, Lihui

    2017-11-13

    Stripe rust, caused by Puccinia striiformis f. sp. tritici ( Pst ), is one of the most destructive diseases of wheat ( Triticum aestivum L.) worldwide. Agropyron cristatum (L.) Gaertn. (2 n = 28, PPPP), one of the wild relatives of wheat, exhibits resistance to stripe rust. In this study, wheat- A . cristatum 6P disomic addition line 4844-12 also exhibited resistance to stripe rust. To identify the stripe rust resistance locus from A . cristatum 6P, ten translocation lines, five deletion lines and the BC₂F₂ and BC₃F₂ populations of two wheat- A . cristatum 6P whole-arm translocation lines were tested with a mixture of two races of Pst in two sites during 2015-2016 and 2016-2017, being genotyped with genomic in situ hybridization (GISH) and molecular markers. The result indicated that the locus conferring stripe rust resistance was located on the terminal 20% of 6P short arm's length. Twenty-nine 6P-specific sequence-tagged-site (STS) markers mapped on the resistance locus have been acquired, which will be helpful for the fine mapping of the stripe rust resistance locus. The stripe rust-resistant translocation lines were found to carry some favorable agronomic traits, which could facilitate their use in wheat improvement. Collectively, the stripe rust resistance locus from A . cristatum 6P could be a novel resistance source and the screened stripe rust-resistant materials will be valuable for wheat disease breeding.

  5. Effects of dietary administration of fenugreek seeds, alone or in combination with probiotics, on growth performance parameters, humoral immune response and gene expression of gilthead seabream (Sparus aurata L.).

    Science.gov (United States)

    Bahi, A; Guardiola, F A; Messina, C; Mahdhi, A; Cerezuela, R; Santulli, A; Bakhrouf, A; Esteban, M A

    2017-01-01

    The use of immunostimulants is considered a promising preventive practice that may help to maintain animal welfare and a healthy environment, while increasing production and providing higher profits. The purpose of this study was to evaluate the effects on gilthead seabream (Sparus aurata L.) of the dietary administration of fenugreek (Trigonella foenum graecum) seeds, alone or combined with one of the following probiotic strains: Bacillus licheniformis (TSB27), Lactobacillus plantarum or Bacillus subtilis (B46). Gilthead seabream were fed a control or one of the supplemented diets for 3 weeks. The effects of these supplemented diets on growth performance parameters and the humoral immune response (natural haemolytic complement, peroxidase, total IgM levels, proteases and antiproteases activities) were evaluated after 2 and 3 weeks of feeding. Simultaneously, the expression levels of some immune-relevant genes (igm, tcr-β, csfr1 and bd) were measured in the head-kidney. Interestingly, all probiotic supplemented diets increased seabream growth rates, especially the B. licheniformis supplemented diet. Generally, humoral immune parameters were enhanced by the dietary supplementation at the different time points measured. The results showed a significant increases in the immune parameters, principally in fish fed only fenugreek or fenugreek combined with B. subtilis. Furthermore, real time qPCR revealed that dietary supplementation significantly enhances the expression of immune-associated genes in the head-kidney, particularly igm gene expression. These results suggest that fenugreek alone or combined with one of the probiotic strains mentioned enhances the immune response of gilthead seabream, a species with one of the highest rates of production in marine aquaculture. Copyright © 2016 Elsevier Ltd. All rights reserved.

  6. WE-EF-207-10: Striped Ratio Grids: A New Concept for Scatter Estimation

    Energy Technology Data Exchange (ETDEWEB)

    Hsieh, S [Stanford University, Stanford, CA (United States)

    2015-06-15

    Purpose: To propose a new method for estimating scatter in x-ray imaging. We propose the “striped ratio grid,” an anti-scatter grid with alternating stripes of high scatter rejection (attained, for example, by high grid ratio) and low scatter rejection. To minimize artifacts, stripes are oriented parallel to the direction of the ramp filter. Signal discontinuities at the boundaries between stripes provide information on local scatter content, although these discontinuities are contaminated by variation in primary radiation. Methods: We emulated a striped ratio grid by imaging phantoms with two sequential CT scans, one with and one without a conventional grid, and processed them together to mimic a striped ratio grid. Two phantoms were scanned with the emulated striped ratio grid and compared with a conventional anti-scatter grid and a fan-beam acquisition, which served as ground truth. A nonlinear image processing algorithm was developed to mitigate the problem of primary variation. Results: The emulated striped ratio grid reduced scatter more effectively than the conventional grid alone. Contrast is thereby improved in projection imaging. In CT imaging, cupping is markedly reduced. Artifacts introduced by the striped ratio grid appear to be minimal. Conclusion: Striped ratio grids could be a simple and effective evolution of conventional anti-scatter grids. Unlike several other approaches currently under investigation for scatter management, striped ratio grids require minimal computation, little new hardware (at least for systems which already use removable grids) and impose few assumptions on the nature of the object being scanned.

  7. Bi-sensory, striped representations: comparative insights from owl and platypus.

    Science.gov (United States)

    Pettigrew, John D

    2004-01-01

    Bi-sensory striped arrays are described in owl and platypus that share some similarities with the other variant of bi-sensory striped array found in primate and carnivore striate cortex: ocular dominance columns. Like ocular dominance columns, the owl and platypus striped systems each involve two different topographic arrays that are cut into parallel stripes, and interdigitated, so that higher-order neurons can integrate across both arrays. Unlike ocular dominance stripes, which have a separate array for each eye, the striped array in the middle third of the owl tectum has a separate array for each cerebral hemisphere. Binocular neurons send outputs from both hemispheres to the striped array where they are segregated into parallel stripes according to hemisphere of origin. In platypus primary somatosensory cortex (S1), the two arrays of interdigitated stripes are derived from separate sensory systems in the bill, 40,000 electroreceptors and 60,000 mechanoreceptors. The stripes in platypus S1 cortex produce bimodal electrosensory-mechanosensory neurons with specificity for the time-of-arrival difference between the two systems. This "thunder-and-lightning" system would allow the platypus to estimate the distance of the prey using time disparities generated at the bill between the earlier electrical wave and the later mechanical wave caused by the motion of benthic prey. The functional significance of parallel, striped arrays is not clear, even for the highly-studied ocular dominance system, but a general strategy is proposed here that is based on the detection of temporal disparities between the two arrays that can be used to estimate distance.

  8. Spatial distribution of Prosopis glandulosa var. torreyana in vegetation stripes of the southern Chihuahuan Desert

    Science.gov (United States)

    López-Portillo, Jorge; Montaña, Carlos

    1999-05-01

    Mosaics consisting of vegetation stripes surrounded by bare areas have been described in several arid and semiarid ecosystems. The dynamics of the system depends on the redistribution of rainwater which is preferentially stored and evapotranspired in the vegetated stripes. A process of plant `colonization' in the upslope fringe of the stripes has been described in some cases and a consequent upslope migration of the stripes has been inferred, but not confirmed in all cases quoted in the literature. In this paper, we studied the spatial distribution of mesquite ( Prosopis glandulosa var. torreyana) and the soil parameters in three vegetation stripes and their associated bare areas in the southern Chihuahuan Desert. The spatial distribution of mesquites of different sizes do not coincide with that expected under the hypothesis of an uniform upslope stripe migration, but soil data suggest that current bare areas had been vegetated some time ago. Dispersion and establishment abilities enhanced by overgrazing may explain the observed mesquite distribution, but the presence of trees with high basal diameters in any part of the stripes suggests stripe permanence at the same site and no upslope migration. These results point to the conflicting evidence on stripe migration that has been already found in other areas. The most probable scenario in our study area is that of a general long-term change of form of the stripes taking place at very variable speeds in different stripes, including the possibility that some of them remain stationary for prolonged periods, and showing different histories of colonization according to the life-history of the different species concerned. The speed and regularity of the process would show a very high temporal and spatial variability due to the interaction of climatic, geomorphologic and biotic interactions.

  9. Assessing Fishers' Support of Striped Bass Management Strategies.

    Science.gov (United States)

    Murphy, Robert D; Scyphers, Steven B; Grabowski, Jonathan H

    2015-01-01

    Incorporating the perspectives and insights of stakeholders is an essential component of ecosystem-based fisheries management, such that policy strategies should account for the diverse interests of various groups of anglers to enhance their efficacy. Here we assessed fishing stakeholders' perceptions on the management of Atlantic striped bass (Morone saxatilis) and receptiveness to potential future regulations using an online survey of recreational and commercial fishers in Massachusetts and Connecticut (USA). Our results indicate that most fishers harbored adequate to positive perceptions of current striped bass management policies when asked to grade their state's management regime. Yet, subtle differences in perceptions existed between recreational and commercial fishers, as well as across individuals with differing levels of fishing experience, resource dependency, and tournament participation. Recreational fishers in both states were generally supportive or neutral towards potential management actions including slot limits (71%) and mandated circle hooks to reduce mortality of released fish (74%), but less supportive of reduced recreational bag limits (51%). Although commercial anglers were typically less supportive of management changes than their recreational counterparts, the majority were still supportive of slot limits (54%) and mandated use of circle hooks (56%). Our study suggests that both recreational and commercial fishers are generally supportive of additional management strategies aimed at sustaining healthy striped bass populations and agree on a variety of strategies. However, both stakeholder groups were less supportive of harvest reductions, which is the most direct measure of reducing mortality available to fisheries managers. By revealing factors that influence stakeholders' support or willingness to comply with management strategies, studies such as ours can help managers identify potential stakeholder support for or conflicts that may

  10. Unfolding of Vortices into Topological Stripes in a Multiferroic Material

    Science.gov (United States)

    Wang, X.; Mostovoy, M.; Han, M. G.; Horibe, Y.; Aoki, T.; Zhu, Y.; Cheong, S.-W.

    2014-06-01

    Multiferroic hexagonal RMnO3 (R =rare earths) crystals exhibit dense networks of vortex lines at which six domain walls merge. While the domain walls can be readily moved with an applied electric field, the vortex cores so far have been impossible to control. Our experiments demonstrate that shear strain induces a Magnus-type force pulling vortices and antivortices in opposite directions and unfolding them into a topological stripe domain state. We discuss the analogy between this effect and the current-driven dynamics of vortices in superconductors and superfluids.

  11. MEDIASTINAL LYMPHOMA AND CHYLOTHORAX IN A STRIPED SKUNK (MEPHITIS MEPHITIS).

    Science.gov (United States)

    Liptovszky, Mátyás; Kerekes, Zoltán; Perge, Edina; Vajdovich, Péter; Papp, Endre Ákos; Molnár, Viktor

    2017-06-01

    Tumors are infrequently reported in skunks, with only a few case reports published in the literature. Chylothorax associated with mediastinal lymphoma was diagnosed in a captive 7-yr-old male striped skunk ( Mephitis mephitis ). The animal presented with anorexia and apathy. Supportive care and prednisolone improved the animal's clinical status for 2 wk preceding its death. Histopathology supported the clinical findings, and the tumor was classified as a mediastinal non-Hodgkin lymphoma, stage 2b, which has not been documented in the literature.

  12. Response to "Critical Assessment of the Evidence for Striped Nanoparticles".

    Directory of Open Access Journals (Sweden)

    Quy Khac Ong

    Full Text Available Stirling et al., (10.1371/journal.pone.0108482 presented an analysis on some of our publications on the formation of stripe-like domains on mixed-ligand coated gold nanoparticles. The authors shed doubts on some of our results however no valid argument is provided against what we have shown since our first publication: scanning tunneling microscopy (STM images of striped nanoparticles show stripe-like domains that are independent of imaging parameters and in particular of imaging speed. We have consistently ruled out the presence of artifacts by comparing sets of images acquired at different tip speeds, finding invariance of the stipe-like domains. Stirling and co-workers incorrectly analyzed this key control, using a different microscope and imaging conditions that do not compare to ours. We show here data proving that our approach is rigorous. Furthermore, we never solely relied on image analysis to draw our conclusions; we have always used the chemical nature of the particles to assess the veracity of our images. Stirling et al. do not provide any justification for the spacing of the features that we find on nanoparticles: ~1 nm for mixed ligand particles and ~ 0.5 nm for homoligand particles. Hence our two central arguments remain unmodified: independence from imaging parameters and dependence on ligand shell chemical composition. The paper report observations on our STM images; none is a sufficient condition to prove that our images are artifacts. We thoroughly addressed issues related to STM artifacts throughout our microscopy work. Stirling et al. provide guidelines for what they consider good STM images of nanoparticles, such images are indeed present in our literature. They conclude that the evidences we provided to date are insufficient, this is a departure from one of the authors' previous article which concluded that our images were composed of artifacts. Given that four independent laboratories have reproduced our measurements and

  13. Behavior and Body Patterns of the Larger Pacific Striped Octopus.

    Directory of Open Access Journals (Sweden)

    Roy L Caldwell

    Full Text Available Over thirty years ago anecdotal accounts of the undescribed Larger Pacific Striped Octopus suggested behaviors previously unknown for octopuses. Beak-to-beak mating, dens shared by mating pairs, inking during mating and extended spawning were mentioned in publications, and enticed generations of cephalopod biologists. In 2012-2014 we were able to obtain several live specimens of this species, which remains without a formal description. All of the unique behaviors listed above were observed for animals in aquaria and are discussed here. We describe the behavior, body color patterns, and postures of 24 adults maintained in captivity. Chromatophore patterns of hatchlings are also shown.

  14. Behavior and Body Patterns of the Larger Pacific Striped Octopus.

    Science.gov (United States)

    Caldwell, Roy L; Ross, Richard; Rodaniche, Arcadio; Huffard, Christine L

    2015-01-01

    Over thirty years ago anecdotal accounts of the undescribed Larger Pacific Striped Octopus suggested behaviors previously unknown for octopuses. Beak-to-beak mating, dens shared by mating pairs, inking during mating and extended spawning were mentioned in publications, and enticed generations of cephalopod biologists. In 2012-2014 we were able to obtain several live specimens of this species, which remains without a formal description. All of the unique behaviors listed above were observed for animals in aquaria and are discussed here. We describe the behavior, body color patterns, and postures of 24 adults maintained in captivity. Chromatophore patterns of hatchlings are also shown.

  15. Assessing the variability of Red Stripe Disease in Louisiana sugarcane using precision agriculture methods

    Science.gov (United States)

    Symptoms of red stripe disease caused by Acidovorax avenae subsp. avenae in Louisiana between 1985 and 2010 were limited to the leaf stripe form which caused no apparent yield loss. During 2010, the more severe top rot form was observed, and a study was initiated to investigate the distribution of r...

  16. Osmoregulatory effects of hypophysectomy and homologous prolactin replacement in hybrid striped bass

    DEFF Research Database (Denmark)

    Jackson, Leslie F; McCormick, Stephen D; Madsen, Steffen S

    2005-01-01

    The effects of ovine prolactin (oPRL) and striped bass prolactin (sbPRL; Morone saxatilis) on plasma osmolality, electrolyte balance, and gill Na+,K+-ATPase activity were investigated in hypophysectomized (Hx), freshwater (FW)-acclimated, hybrid striped bass (M. saxatilis x Morone chrysops...

  17. Color Fringes Bordering Black Stripes at the Bottom of a Swimming Pool

    Science.gov (United States)

    Fuster, Gonzalo; Rojas, Roberto; Slüsarenko, Viktor

    2016-01-01

    We have observed a nice example of chromatic dispersion due to refraction in water, in the form of color fringes bordering the black stripes that exist at the bottom of a swimming pool. Here we give a qualitative description of the phenomenon, explaining the role of the black stripes and the dispersive index of refraction of water.

  18. Genetics of leaf and stripe rust resistance in a bread wheat cultivar ...

    Indian Academy of Sciences (India)

    MYT), Mexico, has shown resistance to leaf rust and stripe rust in the Indian ... rust resistance against. -isogenic line genes present Leaf rust. Stripe rust. Origin. Source. Parentage. Tonichi. –. TR. 10.0. Mexico. RAMC CAR422/Anahuac75. CSP44. Lr48 .... separately have been reported earlier by several authors. Table 2.

  19. Genetics of adult plant stripe rust resistance in CSP44, a selection ...

    Indian Academy of Sciences (India)

    This suggests the presence of nonhypersensitive adult plant stripe rust resistance in the line CSP44. The evaluation of F1, F2 and F3 generations and F6 SSD families from the cross of CSP44 with susceptible wheat cultivar WL711 for stripe rust severity indicated that the resistance in CSP44 is based on two genes showing ...

  20. Genetics of adult plant stripe rust resistance in CSP44, a selection ...

    Indian Academy of Sciences (India)

    Unknown

    Wheat line CSP44, a selection from an Australian bread wheat cultivar Condor, has shown resistance to stripe rust in. India since the last twenty years. Seedlings and adult plants of CSP44 showed susceptible infection types against stripe rust race 46S119 but displayed average terminal disease severity of 2.67 on adult ...

  1. Comparisons of egg quality traits, egg weight loss and hatchability between striped and normal duck eggs.

    Science.gov (United States)

    Yuan, J; Wang, B; Huang, Z; Fan, Y; Huang, C; Hou, Z

    2013-01-01

    1. The egg quality of striped and normal duck eggs was compared to determine why striped eggs show decreased hatchability. A total of 430 eggs, obtained from a Pekin duck breeder flock aged 50-65 wks, were used in three experiments. The eggs were weighed and assigned randomly to measure egg quality traits, egg weight (EW) loss and hatchability during incubation. 2. There were no significant differences between egg types in terms of egg shape index, eggshell strength and thickness, albumen height, Haugh unit, yolk colour, weight of the eggshell with or without membranes, calcium, phosphorus, copper and manganese contents in the eggshell (with the inner and outer membranes or without the inner membrane), albumen weight, dry matter of albumen, crude protein (CP) of thick albumen and pH of the thick albumen. 3. The weight of eggshells with membranes, weight of thick albumen and CP of thin albumen in striped eggs were lower than those in normal eggs. 4. The thin albumen in striped eggs was heavier than that in normal eggs. The pH of the thin albumin in striped egg was significantly higher than that in normal eggs. 5. There were no significant differences in EW loss during incubation or duckling weight between striped and normal eggs. However, the hatchability of striped eggs was lower. 6. The lower weight of the eggshell inner membrane and thick albumen, lower CP content and higher pH in the thin albumen of striped eggs might contribute to lower hatchability.

  2. Mapping genes for resistance to stripe rust in spring wheat landrace PI 480035

    Science.gov (United States)

    Stripe rust caused by Puccinia striiformis Westend. f. sp. tritici Erikks. is an economically important disease of wheat (Triticum aestivum L.). Hexaploid spring wheat landrace PI 480035 was highly resistant to stripe rust in the field in Washington during 2011 and 2012. The objective of this resear...

  3. Movement patterns of an endangered fishery species, Lithognathus ...

    African Journals Online (AJOL)

    More than 60% of the 351 recaptured fish were recaptured within 1 km of their tagging site, some of which were at liberty in excess of three years. Most of the juveniles (93.9%), subadults (71.7%) and adults (64.0%) were recaptured within 10 km. Occasional long-distance movements of up to 800 km were recorded.

  4. The West Coast steenbras Lithognathus aureti is a large ...

    African Journals Online (AJOL)

    denise

    conditions, such as difference in sea surface temperature, density-dependent competition for food, or biochemical genetic variations between the two ..... The median monthly sea surface temperatures recorded by satellite data ..... mussels Choromytilus meridionalus and brown mussels. Perna perna to be the preferred food.

  5. Mice as stowaways? Colonization history of Danish striped field mice.

    Science.gov (United States)

    Andersen, Liselotte Wesley; Jacobsen, Magnus; Vedel-Smith, Christina; Jensen, Thomas Secher

    2017-07-01

    Species from the steppe region of Eastern Europe likely colonized northwestern Europe in connection with agriculture after 6500 BP. The striped field mouse ( Apodemus agrarius Pallas, 1783), is a steppe-derived species often found in human crops. It is common on the southern Danish islands of Lolland and Falster, which have been isolated from mainland Europe since approximately 10 300-8000 BP. Thus, this species could have been brought in with humans in connection with agriculture, or it could be an earlier natural invader. We sequenced 86 full mitochondrial genomes from the northwestern range of the striped field mouse, analysed phylogenetic relationships and estimated divergence time. The results supported human-induced colonization of Denmark in the Subatlantic or Subboreal period. A newly discovered population from Central Jutland in Denmark diverged from Falster approximately 100-670 years ago, again favouring human introduction. One individual from Sweden turned out to be a recent introduction from Central Jutland. © 2017 The Author(s).

  6. Systemic sarcocystosis in a striped skunk (Mephitis mephitis).

    Science.gov (United States)

    Burcham, G N; Ramos-Vara, J A; Vemulapalli, R

    2010-05-01

    A striped skunk with neurological signs was euthanized and examined via necropsy. Histologically, protozoa were found in multiple tissues. Protozoal schizonts measured 15 to 25 mum in diameter and contained 4 to 6 mum crescent-shaped merozoites. Protozoa were associated with necrosis and inflammation in the lung, brain, liver, and nasal epithelium. Immunohistochemistry labeled protozoa strongly positive for Sarcocystis neurona. Polymerase chain reaction-amplified products from the protozoan were 99.6% identical to the corresponding portion of the nuclear small subunit ribosomal RNA gene of S neurona. S neurona origin was further confirmed by amplifying a 451-base pair DNA fragment from the skunk lung, which differed by just 2 or 3 base pairs from the small subunit ribosomal RNA gene of S neurona. Striped skunks act as intermediate and aberrant hosts for S neurona; however, S neurona has rarely been found in extraneural tissues in any species, and systemic sarcocystosis has not been reported in skunks. Additionally, canine distemper virus infection was confirmed with histopathology and immunohistochemistry. Concurrent canine distemper suggests that immunosuppression may have played a role in S neurona infection in this skunk.

  7. Myxosporea (Cnidaria : Myxozoa) infecting the saddled seabream Oblada melanura (L. 1758) (Teleostei : Sparidae) and the painted comber Serranus scriba (L. 1758) (Teleostei : Serranidae) in Tunisia.

    Science.gov (United States)

    Laamiri, Sayef

    2017-05-19

    First parasitological surveys of Myxozoa are performed on the sparid saddled seabream Oblada melanura (Linnaeus, 1758) and the serranid painted comber Serranus scriba (Linnaeus, 1758) caught from the Bay of Bizerte and the Gulf of Tunis respectively in Northeast Tunisia, Western Mediterranean. In this study, 6 bivalvulid myxosporean species belonging to the 3 genera Ceratomyxa Thélohan, 1892, Myxodavisia Zhao, Zhou, Kent & Whipps, 2008 and Zschokkella Auerbach, 1910, are isolated infecting their hosts. Two species Ceratomyxa sp. 1 ex O. melanura (Prevalence (P) = 36%) and Ceratomyxa sp. 2 ex O. melanura (P = 13%) infected the saddled seabream and four species Ceratomyxa sp. 1 ex S. scriba (P = 11.7%), Ceratomyxa sp. 2 ex S. scriba (P = 6.7%), Myxodavisia sp. (P = 8.3%) and Zschokkella sp. (P = 5.6%) infected the painted comber. These myxosporeans differ, in vegetative stages and/or in mature spores, from all the previously known congeneric species, and are described here on the basis of their morphological and morphometric features, their host and tissue specificities and their biogeographical distribution. This is the first report of myxosporean infections in O. melanura and S. scriba. The occurrence of two ceratomyxid species in each host species supports that the genus Ceratomyxa is host-specific not only in sparids but also in serranids, which agrees with data previously obtained from Sparidae in Mediterranean Sea and from Serranidae in GBR, Australia. A member of the myxosporean genus Myxodavisia is recorded from the Mediterranean Sea for the first time, and Zschokkella spp. infections have not previously been recorded from a host in Serranidae. During the examination, a several cases of Co-infection among myxosporeans, both with two and three species, are provided and statistically studied. Indeed, 5% of the breams and 9.4% of the combers are infected with more than one myxosporean parasite. The relationship between myxosporean infections and some biological

  8. Stripe to slab confinement for the linearization of macromolecules in nanochannels.

    Science.gov (United States)

    Benková, Zuzana; Námer, Pavol; Cifra, Peter

    2015-03-21

    We investigated the recently suggested advantageous analysis of chain linearization experiments with macromolecules confined in a stripe-like channel (Huang and Battacharya, EPL, 2014, 106, 18004) using Monte Carlo simulations. The enhanced chain extension in a stripe, which is due to the significant excluded volume interactions between the monomers in two dimensions, weakens considerably on transition to an experimentally feasible slit-like channel. Based on the chain extension-confinement strength dependence and the structure factor behavior for a chain in a stripe, we infer the excluded volume regime (de Gennes regime) typical for two-dimensional systems. On widening of the stripe in a direction perpendicular to the stripe plane, i.e. on the transition to the slab geometry, the advantageous chain extension decreases and a Gaussian regime is observed for not very long semiflexible chains. The evidence for pseudo-ideality in confined chains is based on four indicators: the extension curves, variation of the extension with the persistence length P, estimated limits for the regimes in the investigated systems, and the structure factor behavior. The slab behavior can be observed when the two-dimensional stripe (originally of a one-monomer thickness) reaches a reduced thickness D larger than approximately D/P ≈ 0.2 in the third dimension. This maximum height of a slab at which the advantage of a stripe is retained is very low and has implications for DNA linearization experiments.

  9. Intervertebral disk disease in 3 striped skunks (Mephitis mephitis).

    Science.gov (United States)

    Krauss, Maximiljan W; Benato, Livia; Wack, Allison; McDonnell, John J; Schoemaker, Nico J; Westerhof, Ineke; Bronson, Ellen; Gielen, Ingrid; Van Caelenberg, Annemie; Hellebuyck, Tom; Meij, Björn P; De Decker, Steven

    2014-07-01

    To describe diagnostic findings, surgical technique, and outcome in 3 striped skunks (Mephitis mephitis) with a history of paraparesis. Case series. Skunks (n = 3) with paraparesis. Neurologic examination revealed upper motor neuron disease (T2-L2) in 2 skunks and lower motor neuron disease (L3-S3) in 1 skunk. Diagnostic imaging included radiography, myelography, CT, and MRI and confirmed intervertebral disk herniation (IVDH) in each skunk. Because initial treatment with pain medication and cage rest did not result in lasting improvement, spinal surgery was performed. Hemilaminectomy (2 skunks) and dorsal laminectomy (1 skunk) was performed with removal of extruded disk material. The skunks improved after surgery but all had minor residual neurologic deficits when examined at various times postoperatively. Thoracolumbar intervertebral disk herniation occurs in skunks, and must be included in the differential diagnosis of paraparesis. © Copyright 2014 by The American College of Veterinary Surgeons.

  10. Explanation of the nature of stripe magnetic anomalies without inversions

    Science.gov (United States)

    Melikhov, Vjacheslav; Lygin, Ivan; Sokolova, Tatiana

    2014-05-01

    Several scientists of different branches express doubts on the validity of the Earth's geomagnetic field inversions hypothesis [Vine F.J., Matthews D.H, 1963]. Presently a lot of information allows to link the appearance of stripe magnetic anomalies of both signs with the spreading fracture structure (horizontal segmentation of intrusions and sills, breaks in the strong crust, vertical movements of blocks), remagnetization near the borders of the blocks, hydrothermal activity. Non-inversion mechanism of origin of linear stripe magnetic anomalies in the oceans could be explained as follows. Ascending asthenospheric flows have been enrich with volatile components, become thinner, pressure on the walls of the lithospheric plates grows and part them. When it approaches the surface: - horizontal tensile pressure grows, - lithostatic pressure in the vertical column of rocks decreases, - crust strong upper layer flakes away and begins to move horizontally. It is important that thin magmatic and magnetic layers (further layers) of the newly formed strong upper crust move away from the ridge axis. The structure of such layers forms by horizontal stresses and so consist of the hills and depressions sequences or updiped and downdiped blocks heaped each other. This layer is the main source of the magnetic field and cannot be approximated by a horizontal homogeneous plate as it proved before. In the mid-ocean ridges (MOR) the folding periods of layer depend on its thickness and rigidity and horizontal velocity of spreading. The higher velocity - the longer periods of roughness are and contrary. Same pattern is observed for the stripe magnetic anomalies distribution. The magnetic field of the MOR forms there due to young lava flows which get thermoremanent magnetization according the current direction of geomagnetic field. Partial destruction of the relief, overlaying and creation of the new shapes occur when new magma penetrates the moved magnetic layer. The process entails

  11. Rogue wave and a pair of resonance stripe solitons to a reduced (3+1)-dimensional Jimbo-Miwa equation

    Science.gov (United States)

    Zhang, Xiaoen; Chen, Yong

    2017-11-01

    In this paper, a combination of stripe soliton and lump soliton is discussed to a reduced (3+1)-dimensional Jimbo-Miwa equation, in which such solution gives rise to two different excitation phenomena: fusion and fission. Particularly, a new combination of positive quadratic functions and hyperbolic functions is considered, and then a novel nonlinear phenomenon is explored. Via this method, a pair of resonance kink stripe solitons and rogue wave is studied. Rogue wave is triggered by the interaction between lump soliton and a pair of resonance kink stripe solitons. It is exciting that rogue wave must be attached to the stripe solitons from its appearing to disappearing. The whole progress is completely symmetry, the rogue wave starts itself from one stripe soliton and lose itself in another stripe soliton. The dynamic properties of the interaction between one stripe soliton and lump soliton, rogue wave are discussed by choosing appropriate parameters.

  12. Static and dynamic magnetic properties of stripe-patterned Fe20Ni80 soft magnetic films

    Science.gov (United States)

    Zhu, Zengtai; Feng, Hongmei; Cheng, Xiaohong; Xie, Hongkang; Liu, Qingfang; Wang, Jianbo

    2018-01-01

    Stripe-patterned soft magnetic Fe20Ni80 films were fabricated on silicon substrate via radio frequency magnetron sputtering technology. The static and dynamic magnetic properties of samples were measured by a vibrating sample magnetometer and vector network analyzer. The vector network analyzer ferromagnetic resonance technique was used to analyze the experimental results, which showed that damping and in-plane uniaxial anisotropy can be tuned significantly for the samples with various stripe widths from 5 to 20 µm. A stripe-shaped anisotropy model was used to analyze the experimental results, which were in accord with the theoretical predictions. Moreover, the variation of damping was investigated in detail.

  13. Striped Bass Spawning in Non-Estuarine Portions of the Savannah River

    Energy Technology Data Exchange (ETDEWEB)

    Martin, D.; Paller, M.

    2007-04-17

    Historically, the estuarine portions of the Savannah River have been considered to be the only portion of the river in which significant amounts of striped bass (Morone saxatilis) spawning normally occur. A reexamination of data from 1983 through 1985 shows a region between River Kilometers 144 and 253 where significant numbers of striped bass eggs and larvae occur with estimated total egg production near that currently produced in the estuarine reaches. It appears possible that there are two separate spawning populations of striped bass in the Savannah River.

  14. Magnetic stripes and holes: Complex domain patterns in perforated films with weak perpendicular anisotropy

    Directory of Open Access Journals (Sweden)

    F. Valdés-Bango

    2017-05-01

    Full Text Available Hexagonal antidot arrays have been patterned on weak perpendicular magnetic anisotropy NdCo films by e-beam lithography and lift off. Domain structure has been characterized by Magnetic Force Microscopy at remanence. On a local length scale, of the order of stripe pattern period, domain configuration is controlled by edge effects within the stripe pattern: stripe domains meet the hole boundary at either perpendicular or parallel orientation. On a longer length scale, in-plane magnetostatic effects dominate the system: clear superdomains are observed in the patterned film with average in-plane magnetization along the easy directions of the antidot array, correlated over several antidot array cells.

  15. Magnetic stripes and holes: Complex domain patterns in perforated films with weak perpendicular anisotropy

    Science.gov (United States)

    Valdés-Bango, F.; Vélez, M.; Alvarez-Prado, L. M.; Alameda, J. M.; Martín, J. I.

    2017-05-01

    Hexagonal antidot arrays have been patterned on weak perpendicular magnetic anisotropy NdCo films by e-beam lithography and lift off. Domain structure has been characterized by Magnetic Force Microscopy at remanence. On a local length scale, of the order of stripe pattern period, domain configuration is controlled by edge effects within the stripe pattern: stripe domains meet the hole boundary at either perpendicular or parallel orientation. On a longer length scale, in-plane magnetostatic effects dominate the system: clear superdomains are observed in the patterned film with average in-plane magnetization along the easy directions of the antidot array, correlated over several antidot array cells.

  16. Effects of mannan oligosaccharide and inulin on sharpsnout seabream (Diplodus puntazzo in the context of partial fish meal substitution by soybean meal

    Directory of Open Access Journals (Sweden)

    Giovanni Piccolo

    2013-03-01

    Full Text Available One hundred forty-four sharpsnout seabream of about 100 g initial body weight were randomly stocked in 12 experiment tanks (180 L. Testing conditions included 12 fish per tank, with triplicate tanks for treatment. The experimental period lasted 150 days. Average water temperature was 21.9±1.6°C, salinity was 30.0‰ and pH ranged from 7 to 8, throughout the experiment. A control diet (FM was made from fish meal. One similar diet (SBM was made with approximately 40% of the protein supplied by soybean meal. The remaining two diets (SBM-MOS and SBM-INU were formulated adding 8 g of mannanoligosaccharide (MOS and inulin (INU per kg of the SBM diet, respectively. The results showed that mean final weight (average values 234.4 g, specific growth rate (average values 0.585, feed conversion rate (average values 2.05 and protein efficiency ratio (average values 1.01 were unaffected by MOS or INU supplementation to SBM diet. Body proximate composition was affected by MOS and INU supplementation. Fish fed SBM-MOS and SBM-INU diets showed the highest moisture level and the lowest lipid content. Also the total polyunsaturated fatty of the lipids was reduced by MOS and INU in comparison to SBM diet alone.

  17. Exposure of the gilthead seabream (Sparus aurata to sediments contaminated with heavy metals down-regulates the gene expression of stress biomarkers

    Directory of Open Access Journals (Sweden)

    Said Benhamed

    2016-01-01

    Full Text Available Heavy metals incidence in the aquatic environment and its accumulation in fish are under constant review. Gilthead seabream (Sparus aurata specimens were exposed for two weeks to sediments highly concentrated in metals, collected at the Portman Bay (Murcia, Spain. The metals bioaccumulation was tested in liver, muscle and skin. The potential of the sediment exposure to induce variation of the stress biomarkers genes was conducted in liver and skin. Results revealed that sediments were highly contaminated with metals. However, following 2 weeks exposure to the sediments, Cd accumulates only in liver. Interestingly, the expression of the genes mta, hsp 70 and hsp 90 were significantly down-regulated in skin. Nevertheless, cyp1a1 gene was up-regulated only in liver. Results uphold that the stress response magnitude was organ-dependent and the skin was the most responsive tissue to metal stress conditions. These results suggest that skin should be considered as target organ for biomarkers analysis in fishes.

  18. Vertebrae length and ultra-structure measurements of collagen fibrils and mineral content in the vertebrae of lordotic gilthead seabreams (Sparus aurata).

    Science.gov (United States)

    Berillis, Panagiotis; Panagiotopoulos, Nikolaos; Boursiaki, Vaia; Karapanagiotidis, Ioannis T; Mente, Eleni

    2015-08-01

    Skeletal deformities of gilthead seabream (Sparus aurata) are a major factor affecting the production cost, the external morphology and survival and growth of the fish. Adult individuals of S. aurata were collected from a commercial fish farm in Greece and were divided into two groups: one with the presence of lordosis, a skeletal deformity, and one without any skeletal deformity. Fishes were X-rayed, and cervical, abdominal and caudal vertebrae lengths were measured. Vertebrae were taken from the site of the vertebral column where lordosis occurred. One part was decalcified and prepared for collagen examination with transmission electron microscopy, and the rest were incinerated, and the Ca and P contents were measured. The stoichiometries of the samples were obtained by EDS (Energy Dispersive Spectroscopy). The same procedure was followed for fish without skeletal deformities (vertebrae were taken from the middle region of the vertebral column). The decalcified vertebrae parts were examined with TEM, collagen micrographs were taken and the fibrils' periods and diameters were measured. There were no significant differences for both Ca and P or the collagen fibrils' periods between the two fish groups. The mean lengths of the cervical, abdominal and caudal vertebrae where lordosis occurred were similar to the lengths of the respective regions of the individuals without the skeletal deformity. The TEM examination showed a significantly smaller mean vertebrae collagen fibril diameter from the fishes with lordosis compared with those from the controls, revealing the significance of collagen to bone structure. Copyright © 2015 Elsevier Ltd. All rights reserved.

  19. Sequence analysis of RNA3 of Maize stripe virus associated with stripe disease of sorghum (Sorghum bicolor in India

    Directory of Open Access Journals (Sweden)

    Kalanghad Puthankalam SRINIVAS

    2014-05-01

    Full Text Available Maize stripe virus (MSpV, one of the distinct species of the genus Tenuivirus, has been associated with stripe disease of sorghum in India. In this study, we report the complete sequence analysis of ambisense RNA3 of four MSpV isolates associated with this disease, to confirm its correct identity. The RNA3 of four MSpV-Sorg isolates is 2357 nucleotides in length with two ORFs, one in virion sense (594 nucleotides, non-structural protein 3, NS3 and the other in complementary sense (951 nucleotides, coat protein, CP. The intergenic region between these two ORFs is 653 nucleotides in length, which is rich in U and A residues. The deduced molecular weights of NS3 and CP are ≈22 and ≈34 kDa, respectively. RNA3 has ≈82% sequence identity at nucleotide level with RNA3 of MSpV infecting maize in Florida, USA and Reunion. NS3 and CP ORFs shared ≈94% and ≈95% identities at amino acid levels, respectively with MSpV isolates of maize from Florida and Reunion. The internal non-coding region between two ORFs has 67–68% identity at nucleotide level with the reported MSpV isolates from Florida and Reunion. The sequence identity was more than ≈98% among the four isolates of MSpV-Sorg. Compared to maize-infecting MSpV isolates in USA and Reunion, the sorghum-infecting MSpV isolates in India had more amino acid substitutions in both NS3 and CP. This is the first report of complete sequence analysis of MSpV RNA3 from Asia.

  20. Improving sustainability of striped catfish (Pangasianodon hypophthalmus) farming in the Mekong Delta, Vietnam through recirculation technology

    NARCIS (Netherlands)

    Nguyen, Nhut

    2016-01-01

    The aim of this thesis was to document improvements in sustainability indicators of striped catfish (Pangasianodon hypophthalmus, Sauvage, 1878) production through the application of recirculation and waste treatment techniques. To be able to document improvements in sustainability, in each system

  1. Nonlocal Electron-Phonon Interaction as a Source of Dynamic Charge Stripes in the Cuprates

    Directory of Open Access Journals (Sweden)

    Claus Falter

    2012-01-01

    small pockets with reduced doping. We argue that the incompressibility of the orbital and simultaneously the compressibility of the orbital in the pseudogap state seem to be required to nucleate dynamic stripes.

  2. Striped Marlin Hardparts and Gonads Collected by the PIRO Hawaii Longline Observer Program

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Compilation of all samples collected from striped marlin (Tetrapturus audax) collected and brought to the Aiea Heights Research Facility by the PIRO Hawaii Longline...

  3. Complementary Response of Static Spin-Stripe Order and Superconductivity to Nonmagnetic Impurities in Cuprates

    Science.gov (United States)

    Guguchia, Z.; Roessli, B.; Khasanov, R.; Amato, A.; Pomjakushina, E.; Conder, K.; Uemura, Y. J.; Tranquada, J. M.; Keller, H.; Shengelaya, A.

    2017-08-01

    We report muon-spin rotation and neutron-scattering experiments on nonmagnetic Zn impurity effects on the static spin-stripe order and superconductivity of the La214 cuprates. Remarkably, it was found that, for samples with hole doping x ≈1 /8 , the spin-stripe ordering temperature Tso decreases linearly with Zn doping y and disappears at y ≈4 %, demonstrating a high sensitivity of static spin-stripe order to impurities within a CuO2 plane. Moreover, Tso is suppressed by Zn in the same manner as the superconducting transition temperature Tc for samples near optimal hole doping. This surprisingly similar sensitivity suggests that the spin-stripe order is dependent on intertwining with superconducting correlations.

  4. Evaluation of the effectiveness of centerline rumble stripes on rural roads.

    Science.gov (United States)

    2015-03-01

    This report documents the site characteristics, constructability, summary of audibility testing, and maintenance response of centerline rumble : stripes at two locations: US Route 4 in Mendon-Killington and VT Route 105 in Sheldon. : The primary obje...

  5. Histopathologic correlates of radial stripes on MR images in lysosomal storage disorders.

    NARCIS (Netherlands)

    Voorn, J.P. van der; Pouwels, P.J.; Kamphorst, W.; Powers, J.M.; Lammens, M.M.Y.; Barkhof, F.; Knaap, M.S. van der

    2005-01-01

    BACKGROUND AND PURPOSE: Radially oriented hypointense stripes in hyperintense cerebral white matter are recognized on T2-weighted images of certain lysosomal storage disorders. We compared in vivo and postmortem MR imaging with histopathologic findings in three patients with metachromatic

  6. Yr32 for resistance to stripe (yellow) rust present in the wheat cultivar Carstens V

    DEFF Research Database (Denmark)

    Eriksen, L.; Afshari, F.; Christiansen, M.J.

    2004-01-01

    Stripe or yellow rust of wheat, caused by Puccinia striiformis f. sp. tritici, is an important disease in many wheat-growing regions of the world. A number of major genes providing resistance to stripe rust have been used in breeding, including one gene that is present in the differential tester...... Carstens V. The objective of this study was to locate and map a stripe rust resistance gene transferred from Carstens V to Avocet S and to use molecular tools to locate a number of genes segregating in the cross Savannah/Senat. One of the genes present in Senat was predicted to be a gene that is present...... in Carstens V. For this latter purpose, stripe rust response data from both seedling and field tests on a doubled haploid population consisting of 77 lines were compared to an available molecular map for the same lines using a non-parametric quantitative trait loci (QTL) analysis. Results obtained in Denmark...

  7. Propagation of dark stripe beams in nonlinear media: Snake instability and creation of optical vortices

    DEFF Research Database (Denmark)

    Mamaev, A.V.; Saffman, M.; Zozulya, A.A.

    1996-01-01

    We analyze the evolution of (1+1) dimensional dark stripe beams in bulk media with a photorefractive nonlinear response. These beams, including solitary wave solutions, are shown to be unstable with respect to symmetry breaking and formation of structure along the initially homogeneous coordinate....... Experimental results show the complete sequence of events starting from self-focusing of the stripe, its bending due to the snake instability, and subsequent decay into a set of optical vortices....

  8. Topographic Organization of Inferior Olive Projections to the Zebrin II Stripes in the Pigeon Cerebellar Uvula

    Directory of Open Access Journals (Sweden)

    Iulia Craciun

    2018-03-01

    Full Text Available This study was aimed at mapping the organization of the projections from the inferior olive (IO to the ventral uvula in pigeons. The uvula is part of the vestibulocerebellum (VbC, which is involved in the processing of optic flow resulting from self-motion. As in other areas of the cerebellum, the uvula is organized into sagittal zones, which is apparent with respect to afferent inputs, the projection patterns of Purkinje cell (PC efferents, the response properties of PCs and the expression of molecular markers such as zebrin II (ZII. ZII is heterogeneously expressed such that there are sagittal stripes of PCs with high ZII expression (ZII+, alternating with sagittal stripes of PCs with little to no ZII expression (ZII−. We have previously demonstrated that a ZII+/− stripe pair in the uvula constitutes a functional unit, insofar as the complex spike activity (CSA of all PCs within a ZII+/− stripe pair respond to the same type of optic flow stimuli. In the present study we sought to map the climbing fiber (CF inputs from the IO to the ZII+ and ZII− stripes in the uvula. We injected fluorescent Cholera Toxin B (CTB of different colors (red and green into ZII+ and ZII− bands of functional stripe pair. Injections in the ZII+ and ZII− bands resulted in retrograde labeling of spatially separate, but adjacent regions in the IO. Thus, although a ZII+/− stripe pair represents a functional unit in the pigeon uvula, CF inputs to the ZII+ and ZII− stripes of a unit arise from separate regions of the IO.

  9. Stripe patterns in a granular system induced by slow deformation of its container

    OpenAIRE

    Kitsunezaki, So; Kurumatani, Akemi

    2001-01-01

    We investigate the formation of stripe patterns that appear on the surface of a dry granular system as the container is deformed very slowly. In an experimental study using nearly mono-disperse glass beads, we found that many faults develop beneath t he surface. Our results show that the spacing of stripes is independent of the system size and does not depend significantly on the grain size.

  10. Are stripes beneficial? Dazzle camouflage influences perceived speed and hit rates.

    Directory of Open Access Journals (Sweden)

    Bettina von Helversen

    Full Text Available In the animal kingdom, camouflage refers to patterns that help potential prey avoid detection. Mostly camouflage is thought of as helping prey blend in with their background. In contrast, disruptive or dazzle patterns protect moving targets and have been suggested as an evolutionary force in shaping the dorsal patterns of animals. Dazzle patterns, such as stripes and zigzags, are thought to reduce the probability with which moving prey will be captured by impairing predators' perception of speed. We investigated how different patterns of stripes (longitudinal-i.e., parallel to movement direction-and vertical-i.e., perpendicular to movement direction affect the probability with which humans can hit moving objects and if differences in hitting probability are caused by a misperception of speed. A first experiment showed that longitudinally striped objects were hit more often than unicolored objects. However, vertically striped objects did not differ from unicolored objects. A second study examining the link between perceived speed and hitting probability showed that longitudinally and vertically striped objects were both perceived as moving faster and were hit more often than unicolored objects. In sum, our results provide evidence that striped patterns disrupt the perception of speed, which in turn influences how often objects are hit. However, the magnitude and the direction of the effects depend on additional factors such as speed and the task setup.

  11. Structural lability of Barley stripe mosaic virus virions.

    Directory of Open Access Journals (Sweden)

    Valentin V Makarov

    Full Text Available Virions of Barley stripe mosaic virus (BSMV were neglected for more than thirty years after their basic properties were determined. In this paper, the physicochemical characteristics of BSMV virions and virion-derived viral capsid protein (CP were analyzed, namely, the absorption and intrinsic fluorescence spectra, circular dichroism spectra, differential scanning calorimetry curves, and size distributions by dynamic laser light scattering. The structural properties of BSMV virions proved to be intermediate between those of Tobacco mosaic virus (TMV, a well-characterized virus with rigid rod-shaped virions, and flexuous filamentous plant viruses. The BSMV virions were found to be considerably more labile than expected from their rod-like morphology and a distant sequence relation of the BSMV and TMV CPs. The circular dichroism spectra of BSMV CP subunits incorporated into the virions, but not subunits of free CP, demonstrated a significant proportion of beta-structure elements, which were proposed to be localized mostly in the protein regions exposed on the virion outer surface. These beta-structure elements likely formed during virion assembly can comprise the N- and C-terminal protein regions unstructured in the non-virion CP and can mediate inter-subunit interactions. Based on computer-assisted structure modeling, a model for BSMV CP subunit structural fold compliant with the available experimental data was proposed.

  12. Experimental Toxoplasma gondii infection in striped skunk (Mephitis mephitis).

    Science.gov (United States)

    Quirk, Travis; Dubey, J P

    2008-06-01

    Twenty-three striped skunks (Mephitis mephitis) without demonstrable antibodies in 1:25 serum dilution in the modified agglutination test (MAT) were fed sporulated Toxoplasma gondii oocysts (9 skunks) or tissue cysts (10 skunks), and 4 skunks (controls) were not fed T. gondii. Skunks were bled before feeding T. gondii, 10 and 23- 25 days postinoculation (PI). All 9 seronegative skunks fed oocysts died of acute toxoplasmosis between 7 and 19 days PI; T. gondii tachyzoites were found in histological sections of many tissues. One of the 10 skunks fed tissue cysts and 1 of the 4 controls also died of acute toxoplasmosis days 19 and 20 PI; these animals probably became infected by ingestion of unexcysted oocysts passed in feces of skunks fed oocysts that were housed in the same room that skunks fed tissue cysts were housed. The remaining 9 skunks fed tissue cysts and the 3 controls developed only a mild illness and were killed in good health on days 23-25 PI. Antibodies to T. gondii were not found in 1:25 serum dilution of any of the 19 of 23 skunks that were alive on day 10 PI; 12 of 13 skunks had antibodies (MAT 1:80 or higher) on the day they were killed. Antibodies were not found in 1 skunk. Results indicate that skunks can develop IgG antibodies to T. gondii within 3 wk PI, and primary toxoplasmosis can be fatal in skunks.

  13. Evaluation of marked-recapture for estimating striped skunk abundance

    Science.gov (United States)

    Greenwood, R.J.; Sargeant, A.B.; Johnson, D.H.

    1985-01-01

    The mark-recapture method for estimating striped skunk (Mephitis mephitis) abundance was evaluated by systematically livetrapping a radio-equipped population on a 31.4-km2 study area in North Dakota during late April of 1977 and 1978. The study population was 10 females and 13 males in 1977 and 20 females and 8 males in 1978. Skunks were almost exclusively nocturnal. Males traveled greater nightly distances than females (3.3 vs. 2.6 km, P skunks spent on the study area. Little variation in capture probabilities was found among trap-nights. Skunks exhibited neither trap-proneness nor shyness. Capture rates in 1977 were higher for males than for females; the reverse occurred in 1978. Variation in individual capture rates was indicated among males in 1977 and among females in 1978. Ten estimators produced generally similar results, but all underestimated true population size. Underestimation was a function of the number of untrapped skunks, primarily those that spent limited time on the study area. The jackknife method produced the best estimates of skunk abundance.

  14. Characterizing the Heat Flow from Between Enceladus' Tiger Stripes

    Science.gov (United States)

    Howett, C.; Spencer, J. R.; Verbiscer, A.

    2017-12-01

    Enceladus' heat flow provides a fundamental constraint on its tidal dissipation mechanisms, orbital evolution, and the physical processes that generate the plumes. Determining the total amount of emission is proving difficult, as different techniques produce differing constraints. For example, an initial estimate of this value, 5.8±1.3 GW, was made by Spencer et al. (2006) using Cassini Composite Infrared Spectrometer (CIRS) 600 to 1100 cm-1 observations, which was refined using 10 to 600 cm-1 CIRS observations to 15.8±3.1 GW by Howett et al. (2011). However, recent reanalysis of high-spatial resolution 10 to 1100 cm-1 CIRS observations of Enceladus' active south polar region conducted by Spencer and Howett gives a heat flow of 4.64±0.23 GW. Whilst all of these heat flow estimates are much larger than those expected in a steady state, 1.1 GW (Meyer and Wisdom, 2007), their obvious discrepancy is a puzzle. In this work we seek to help understand these discrepancies by determining how much endogenic heat flow is coming from the funiscular terrain between Enceladus active tiger stripes.

  15. Strategies for Wheat Stripe Rust Pathogenicity Identified by Transcriptome Sequencing.

    Directory of Open Access Journals (Sweden)

    Diana P Garnica

    Full Text Available Stripe rust caused by the fungus Puccinia striiformis f.sp. tritici (Pst is a major constraint to wheat production worldwide. The molecular events that underlie Pst pathogenicity are largely unknown. Like all rusts, Pst creates a specialized cellular structure within host cells called the haustorium to obtain nutrients from wheat, and to secrete pathogenicity factors called effector proteins. We purified Pst haustoria and used next-generation sequencing platforms to assemble the haustorial transcriptome as well as the transcriptome of germinated spores. 12,282 transcripts were assembled from 454-pyrosequencing data and used as reference for digital gene expression analysis to compare the germinated uredinospores and haustoria transcriptomes based on Illumina RNAseq data. More than 400 genes encoding secreted proteins which constitute candidate effectors were identified from the haustorial transcriptome, with two thirds of these up-regulated in this tissue compared to germinated spores. RT-PCR analysis confirmed the expression patterns of 94 effector candidates. The analysis also revealed that spores rely mainly on stored energy reserves for growth and development, while haustoria take up host nutrients for massive energy production for biosynthetic pathways and the ultimate production of spores. Together, these studies substantially increase our knowledge of potential Pst effectors and provide new insights into the pathogenic strategies of this important organism.

  16. Response of Gilthead Seabream (Sparus aurata L., 1758 Larvae to Nursery Odor Cues as Described by a New Set of Behavioral Indexes

    Directory of Open Access Journals (Sweden)

    Pedro Morais

    2017-10-01

    Full Text Available Temperate marine fish larvae use a series of environmental cues (e.g., olfactory, hearing, visual to mediate the selection of nursery habitats. However, habitat selection may vary according to individuals' physiological condition. Therefore, this study aimed to determine the ability of gilthead seabream (Sparus aurata L., 1758 larvae to utilize natural odor cues to locate nursery habitats along ontogeny and to examine how it varies with individual's physiological condition. The hypothesis being tested is that S. aurata larvae prefer coastal rocky reefs as nursery areas, but they might use coastal lagoons as nursery grounds—ecosystems known for their productivity—if under starvation conditions, as a compensatory mechanism to avoid slow growth or even death. A choice-chamber experiment was used to investigate the behavioral responses of satiated and starved laboratory-reared S. aurata larvae, along ontogeny (pre-flexion, flexion, post-flexion, to water collected in a coastal artificial rocky reef and a coastal lagoon. The physiological condition of S. aurata larvae was determined by analyzing several biochemical condition indices. Complementarily, a new set of four preference indexes were developed—Choice-Chamber Preference Indexes—and discussed to provide a clear measure of the behavioral changes of a species along ontogeny by balancing all the behavioral choices made during the experimental trials, including the unresponsive behavior. A developmental threshold was identified at 24 days post-hatching, before which insufficient swimming capability disabled responsive behavior. Beyond this threshold, post-flexion larvae preferred rocky coastal water over lagoon water, even if under starvation conditions or poor physiological condition, despite the fact that the unresponsive behavior was largely predominant. S. aurata larvae displayed a cautionary behavioral strategy, so the compensatory mechanisms to ensure metapopulation stability and

  17. A New Estimate of the Power Emitted by Enceladus' Tiger Stripes

    Science.gov (United States)

    Spencer, John R.; Howett, C. J.; Verbiscer, A. J.; Hurford, T. A.; Segura, M.; Spencer, D. C.

    2013-10-01

    The heat flow from the south pole of Enceladus is a fundamental constraint on its tidal dissipation mechanisms, orbital evolution, and the physical processes that generate the plumes. Cassini Composite Infrared Spectrometer (CIRS) observations of the integrated 17 - 1000 micron thermal emission from the south pole have produced an estimated heat flow of 15.8 +/- 3.1 GW (Howett et al. 2011). This is a surprisingly high value, about 10x higher than can be generated by steady-state tidal heating (Meyer and Wisdom 2007). The estimate includes all sources of south polar endogenic emission, but is model-dependent because the observation also includes passive re-radiation of absorbed sunlight, which must be modeled and subtracted from the observed radiation. An alternate approach is to use higher spatial resolution CIRS observations in which emission from the tiger stripes, which is certainly endogenic, is spatially separated from emission from the surrounding terrain, which consists of passive emission plus a possible endogenic component. Tiger stripe emission is thus a lower bound on total endogenic emission, and is itself important as a constraint on plume generation and transport. CIRS has several observations of 9 - 16 micron emission with sufficient resolution to resolve the tiger stripes, but only limited resolved observations at longer wavelengths where most heat is radiated. Combining the best resolved data at all wavelengths, with reasonable assumptions about the ratio of long to short wavelength emission, we obtain preliminary estimates of tiger stripe thermal emission of roughly 4.2 GW, to which must be added ~0.5 GW of plume latent heat (Ingersoll and Pankine 2009), for a total tiger stripe power of about 4.7 GW. We are investigating whether the discrepancy between the new tiger stripe heat flow estimate, and the earlier estimate for the entire south pole, results from a large heat flow component that is not from the tiger stripes, or possible inaccuracies in

  18. Introgression of Chromosome 3Ns from Psathyrostachys huashanica into Wheat Specifying Resistance to Stripe Rust

    Science.gov (United States)

    Kang, Houyang; Wang, Yi; Fedak, George; Cao, Wenguang; Zhang, Haiqin; Fan, Xing; Sha, Lina; Xu, Lili; Zheng, Youliang; Zhou, Yonghong

    2011-01-01

    Wheat stripe rust is a destructive disease in the cool and humid wheat-growing areas of the world. Finding diverse sources of stripe rust resistance is critical for increasing genetic diversity of resistance for wheat breeding programs. Stripe rust resistance was identified in the alien species Psathyrostachys huashanica, and a wheat- P. huashanica amphiploid line (PHW-SA) with stripe rust resistance was reported previously. In this study, a P. huashanica 3Ns monosomic addition line (PW11) with superior resistance to stripe rust was developed, which was derived from the cross between PHW-SA and wheat J-11. We evaluated the alien introgressions PW11-2, PW11-5 and PW11-8 which were derived from line PW11 for reaction to new Pst race CYR32, and used molecular and cytogenetic tools to characterize these lines. The introgressions were remarkably resistant to CYR32, suggesting that the resistance to stripe rust of the introgressions thus was controlled by gene(s) located on P. huashanica chromosome 3Ns. All derived lines were cytologically stable in term of meiotic chromosome behavior. Two 3Ns chromosomes of P. huashanica were detected in the disomic addition line PW11-2. Chromosomes 1B of substitution line PW11-5 had been replaced by a pair of P. huashanica 3Ns chromosomes. In PW11-8, a small terminal segment from P. huashanica chromosome arm 3NsS was translocated to the terminal region of wheat chromosomes 3BL. Thus, this translocated chromosome is designated T3BL-3NsS. These conclusions were further confirmed by SSR analyses. Two 3Ns-specific markers Xgwm181 and Xgwm161 will be useful to rapidly identify and trace the translocated fragments. These introgressions, which had significant characteristics of resistance to stripe rust, could be utilized as novel germplasms for wheat breeding. PMID:21760909

  19. Meat quality of broiler breast fillets with white striping and woody breast muscle myopathies.

    Science.gov (United States)

    Tijare, V V; Yang, F L; Kuttappan, V A; Alvarado, C Z; Coon, C N; Owens, C M

    2016-09-01

    The global poultry industry has been faced with emerging broiler breast meat quality issues including conditions known as white striping (WS, white striations parallel to muscle fibers) and woody breast (WB, hardness of raw fillet). Experiments were conducted to evaluate effects of WS and WB hardness on meat quality traits in broiler breast fillets. In Exp. 1, birds were processed at approximately 9 wk of age and deboned at 4 h postmortem (PM); in Exp. 2, birds were processed at approximately 6 and 9 wk of age and deboned at 2 h PM. Fillets were categorized as: normal for both white striping and woody breast (NORM); moderate for white striping and mild for woody breast (MILD); severe for white striping and mild for woody breast (WS); severe for woody breast and moderate for white striping (WB); or severe for both white striping and woody breast (BOTH). Sarcomere length, gravimetric fragmentation index, marination uptake, cook loss, and Meullenet-Owens razor shear energy (MORSE) values on non-marinated and marinated fillets were assessed. Sarcomeres tended to be longer (P = 0.07) with increasing severity of WS and WB in both experiments and gravimetric fragmentation index did not differ (P > 0.05) among categories. Marinade uptake decreased (P  0.05) in non-marinated fillets, the marinated BOTH fillets had greater MORSE values (P  0.05) among categories of marinated breasts. At 9 wk, WS and BOTH were higher (P white striping and woody breast, individually or in combination, negatively impact meat quality, especially water holding capacity attributes such as marinade uptake and cook loss. © 2016 Poultry Science Association Inc.

  20. WISE-Selected Red and Obscured Quasars in Stripe 82

    Science.gov (United States)

    Glikman, Eilat; Lacy, M.; Urrutia, T.; Urry, C. M.

    2013-01-01

    We identified a sample of 120 dust-reddened quasars identified by matching radio sources detected at 1.4 GHz in the Faint Images of the Radio Sky at Twenty Centimeters (FIRST) survey with the near-infrared Two Micron All Sky Survey (2MASS) catalog and color-selecting red sources. We interpret this population of objects as a tansitional phase in merger-driven quasar/galaxy co-evolution where these reddened quasars are shedding their dusty environment prior to becoming a “normal” blue quasar. When correcting for extinction, we find that red quasars make up ~15%-20% of the luminous quasar population. The radio requirement was intended to avoid contamination from stars, but restricts our sample to radio-detected objects. With the release of the Wide-Field Infrared Survey Explorer (WISE) we can now select all red quasars regardless of their radio propoerties, using infrared colors. We present a pilot survey for heavily obscured luminous quasars using infrared selection from WISE colors in the SDSS Stripe 82. We concentrated on objects with both bright WISE 22 micron fluxes and 2MASS magnitudes that lack spectra in SDSS to identify the brightest (mostly high luminosity) sources that complement the fainter objects in Spitzer-selected samples. Our relatively liberal color selection produced a candidate list of 12 sources. We obtained near-infrared spectra for all using SpeX on IRTF and have spectroscopically confirmed at least five obscured and reddened quasars. We explore the nature of the dusty quasar population and how it depends on redshift, luminosity and radio-loudness.

  1. Zero-bias-field microwave dynamic magnetic properties in trapezoidal ferromagnetic stripe

    International Nuclear Information System (INIS)

    Bi, Mei; Wang, Xin; Lu, Haipeng; Zhang, Li; Deng, Longjiang; Xie, Jianliang

    2016-01-01

    Dynamic magnetization response of the axially magnetized ferromagnetic stripe with trapezoidal cross section has been studied. The stripe with beveled edges exhibits multiple resonant peaks modes under an in-plane microwave excitation compared with the single resonant of vertical edge surfaces. The complexity of the observed response is attributed to the spatially nonuniform equilibrium spin distribution at the stripe edges. Micromagnetic simulations identify spin waves as spatially localized mode at the modified edges. This one is also described by effective pinning boundary conditions taking into account finite-size effects, which is related to the exchange interaction, surface anisotropy and dipole–dipole interaction. These results provide detailed insights into the nonlinear spin dynamics of microstructures influenced by the edge properties. - Highlights: • Series of FeCoNbBCu stripes with trapezoidal cross section have been fabricated. • The stripe with beveled edges exhibits multiple resonant peaks modes. • Micromagnetic simulations identify the spatially localized mode. • The effective pinning boundary conditions taking into account finite-size effects.

  2. Development of a Spectrophotometric System to Detect White Striping Physiopathy in Whole Chicken Carcasses

    Science.gov (United States)

    Traffano-Schiffo, Maria Victoria; Castro-Giraldez, Marta; Colom, Ricardo J.; Fito, Pedro J.

    2017-01-01

    Due to the high intensification of poultry production in recent years, white chicken breast striping is one of the most frequently seen myopathies. The aim of this research was to develop a spectrophotometry-based sensor to detect white striping physiopathy in chicken breast meat in whole chicken carcasses with skin. Experiments were carried out using normal and white striping breasts. In order to understand the mechanism involved in this physiopathy, the different tissues that conform each breast were analyzed. Permittivity in radiofrequency (40 Hz to 1 MHz) was measured using two different sensors; a sensor with two flat plates to analyze the whole breast with skin (NB or WSB), and a two needles with blunt-ended sensor to analyze the different surface tissues of the skinless breast. In the microwave range (500 MHz to 20 GHz), permittivity was measured as just was described for the two needles with blunt-ended sensor. Moreover, fatty acids composition was determined by calorimetry techniques from −40 °C to 50 °C at 5 °C/min after previously freeze-drying the samples, and pH, microstructure by Cryo-SEM and binocular loupe structure were also analyzed. The results showed that the white striping physiopathy consists of the partial breakdown of the pectoral muscle causing an increase in fatty acids, reducing the quality of the meat. It was possible to detect white striping physiopathy in chicken carcasses with skin using spectrophotometry of radiofrequency spectra. PMID:28471378

  3. Charged Stripes in the Two-Orbital Hubbard Model for Pnictides

    Science.gov (United States)

    Yao, Dao-Xin; Luo, Qinlong; Prestel, Thomas; Daghofer, Maria; Moreo, Adriana; Dagotto, Elbio

    2011-03-01

    The two-orbital Hubbard model for the pnictides is studied numerically in the real-space Hartree-Fock approximation. Upon electron doping, states with a nonuniform ditribution of charge are stabilized. The patterns observed correspond to charge stripes that run perpendicular to the direction of the spin stripes of the undoped magnetic ground state. These striped states are robust when the undoped state has a gap, although with a decreasing amplitude as the gap decreases. Results for hole doping and implications for recent experiments that reported electronic nematic states and spin incommensurability in the pnictides are also discussed. This work was supported by the U.S. Department of Energy, Office of Basic Energy Sciences, Materials Sciences and Engineering Division (Q.L., A.M., E.D.), the SYSU and NSFC-11074310 (D.X.Y.), the DFG under the Emmy-Noether program (T.P., M.D.).

  4. Lump Solutions and Resonance Stripe Solitons to the (2+1-Dimensional Sawada-Kotera Equation

    Directory of Open Access Journals (Sweden)

    Xian Li

    2017-01-01

    Full Text Available Based on the symbolic computation, a class of lump solutions to the (2+1-dimensional Sawada-Kotera (2DSK equation is obtained through making use of its Hirota bilinear form and one positive quadratic function. These solutions contain six parameters, four of which satisfy two determinant conditions to guarantee the analyticity and rational localization of the solutions, while the others are free. Then by adding an exponential function into the original positive quadratic function, the interaction solutions between lump solutions and one stripe soliton are derived. Furthermore, by extending this method to a general combination of positive quadratic function and hyperbolic function, the interaction solutions between lump solutions and a pair of resonance stripe solitons are provided. Some figures are given to demonstrate the dynamical properties of the lump solutions, interaction solutions between lump solutions, and stripe solitons by choosing some special parameters.

  5. Influence of substrate on the magnetic properties of Ni and permalloy sub-micrometric patterned stripes

    Energy Technology Data Exchange (ETDEWEB)

    Duque, J G S [Nucleo de Fisica, UFS, 49500-000, Itabaiana, SE (Brazil); Rosa, W O [CSIC, Instituto de Ciencia de Materiales, 28049 Madrid (Spain); Nunes, W C [Instituto de Fisica, UFF, Campus da Praia Vermelha, Niteroi, RJ 24.210-340 (Brazil); De Araujo, A E P [Unidade Academica de Garanhuns, UFRPE, CEP 55296-190, Garanhuns-PE (Brazil); Pagliuso, P G; Cescato, L; Knobel, M [Instituto de Fisica ' Gleb Wataghin' , UNICAMP, CP 6165, Campinas SP (Brazil); Socolovsky, L M [UFG, Instituto de Fisica, BR-74001970 Goiania, GO (Brazil); Zysler, R D, E-mail: jduque@fisica.ufs.b [Centro Atomico Bariloche, 8400 San Carlos de Bariloche, RN (Argentina)

    2010-01-20

    The magnetic properties of sub-micrometric magnetic structures of Ni and permalloy (Ni{sub 80}Fe{sub 20}) patterned stripes are studied as functions of temperature. The samples are produced by combining an interferometric lithographic technique with sputtering. At room temperature, ferromagnetic resonance and hysteresis data indicate the existence of an in-plane uniaxial anisotropy in both samples. The NiFe sample has an easy axis along the stripes direction in the entire studied temperature range (2 < T < 300 K). On the other hand, an interesting change in the easy magnetization direction is observed in Ni samples, from parallel to perpendicular to the axis of the stripes, when the temperature is decreased. The results are interpreted in terms of a competition between shape and magnetoelastic anisotropies.

  6. A new species of striped Ichthyophis Fitzinger, 1826 (Amphibia: Gymnophiona: Ichthyophiidae) from Myanmar.

    Science.gov (United States)

    Wilkinson, Mark; Presswell, Bronwen; Sherratt, Emma; Papadopoulou, Anna; Gower, David J

    2014-04-02

    A new species of striped ichthyophiid caecilian, Ichthyophis multicolor sp. nov., is described on the basis of morphological and molecular data from a sample of 14 specimens from Ayeyarwady Region, Myanmar. The new species resembles superficially the Indian I. tricolor Annandale, 1909 in having both a pale lateral stripe and an adjacent dark ventrolateral stripe contrasting with a paler venter. It differs from I. tricolor in having many more annuli, and in many details of cranial osteology, and molecular data indicate that it is more closely related to other Southeast Asian Ichthyophis than to those of South Asia. The caecilian fauna of Myanmar is exceptionally poorly known but is likely to include chikilids as well as multiple species of Ichthyophis.

  7. Striped states in a many-body system of tilted dipoles

    Science.gov (United States)

    Wenzel, Matthias; Böttcher, Fabian; Langen, Tim; Ferrier-Barbut, Igor; Pfau, Tilman

    2017-11-01

    We study theoretically and experimentally the behavior of a strongly confined dipolar Bose-Einstein condensate in the regime of quantum-mechanical stabilization by beyond-mean-field effects. Theoretically, we demonstrate that self-organized "striped" ground states are predicted in the framework of the extended Gross-Pitaevskii theory. Experimentally, by tilting the magnetic dipoles we show that self-organized striped states can be generated, likely in their metastable state. Matter-wave interference experiments with multiple stripes show that there is no long-range off-diagonal order (global phase coherence). We outline a parameter range where global phase coherence could be established, thus paving the way towards the observation of supersolid states in this system.

  8. Effect of white striping on chemical composition and nutritional value of chicken breast meat

    Directory of Open Access Journals (Sweden)

    Massimiliano Petracci

    2014-03-01

    Full Text Available White striping defect (appearance of white striations parallel to muscle fiber on surface of breast is considered an emerging issue in chicken breast meat which is related to increasing growth rate of modern hybrid birds. This study was aimed at evaluating the effect of white striping on chemical composition and nutritional value of chicken breast meat. During three replications, a total of 108 Pectoralis major muscles representing three degrees of white striping (absence=normal; presence classified in 2 levels as moderate or severe were selected to determine proximate composition (moisture, protein, lipid and collagen as well as sarcoplasmic and myofibrillar protein profile by sodium dodecyl sulphatepolyacrylamide gel electrophoresis analysis. The results showed that both severe and moderate white-striped fillets had higher fat content (2.53 vs 1.46 vs 0.78%; P<0.001, lower protein level (20.9 vs 22.2 vs 22.9%; P<0.001, decreased quality of protein as proven by higher collagen content (1.30 vs 1.37 vs 1.43%; P<0.001, and different pattern on myofibrillar and sarcoplasmic fractions when compared to normal fillets. Moreover, severe white-striped fillets exhibited higher energy content (450.7 vs 421.1 kJ/100g; P<0.01 with respect to normal meat. In conclusion, there was a large worsening of nutritional value of chicken breast meat following occurrence of white striping and this might impair consumer attitude towards poultry meat.

  9. Determination of the quality of stripe-marked and cracked eggs during storage

    Directory of Open Access Journals (Sweden)

    Yu Chi Liu

    2017-07-01

    Full Text Available Objective Stripe marks, which occasionally occur on the shell, do not cause breakage to the shell and shell membranes of eggs. This study investigated the quality of intact eggs (IEs, minor stripe-marked eggs (MEs, severe stripe-marked eggs (SEs, and cracked eggs (CEs during 3-week storage at 25°C. Methods Shell eggs were collected the day after being laid and were washed. Among them, eggs without any visual cracks or stripe marks on the shells were evaluated as IEs by the plant employees using candling in a darkened egg storage room; the remaining eggs exhibited some eggshell defects. At day 3, the eggs were further categorized into IEs, MEs, SEs, CEs, and broken eggs (BEs on the basis of the description given. Except BEs, which were discarded, the remaining eggs were stored at 25°C (approximate relative humidity 50% and then analyzed. Results Stripe marks were observed primarily within the first 3 days after washing. At day 3, CEs had significantly (p<0.05 lower Haugh unit values, but all eggs had grades AA or A, according to the United States Department of Agriculture standard. As storage time increased, differences in egg quality between groups were more obvious. IEs had the highest eggshell breaking strength. During storage, the total plate counts and pathogens, namely Escherichia coli, Campylobacter spp., Staphylococcus aureus, and Salmonella spp., were not detectable in the internal content of IEs and SEs. Conclusion In conclusion, cracks degraded egg quality severely and minor stripe marks only slightly influenced the egg quality.

  10. Effect of white striping on turkey breast meat quality.

    Science.gov (United States)

    Soglia, F; Baldi, G; Laghi, L; Mudalal, S; Cavani, C; Petracci, M

    2018-01-08

    In the past decades, the intense selection practices carried out in order to develop fast growing and high breast-yield turkey hybrids profoundly modified the muscle physiology leading to the development of growth-related alterations and muscular abnormalities. White striations of variable thickness have been particularly observed on the ventral surface of Pectoralis major muscle belonging from heavy male turkeys since several years. However, although the effects of white striping (WS) have been extensively studied on broilers, this condition was not considered as a main quality issue by both turkey producers and meat industry. Thus, this study aimed at evaluating whether the occurrence of WS in heavy male turkeys affects the quality traits and technological properties of meat to the same extent previously observed for broilers. In two replications, 72 Pectoralis major muscles were classified as: normal (NORM), moderate WS (MOD) and severe WS (SEV) cases. The whole muscle was weighed and cut in order to assess colour, ultimate pH, water holding (drip and cooking losses) and binding (marinade uptake) capacities, NMR relaxation properties, shear force as well as proximate composition of meat. The Pectoralis major muscles affected by WS (both moderate and severe cases) exhibited a one-fifth increased weight in comparison with their NORM counterpart. However, the occurrence of WS only partially affected the proximate composition of the meat. In detail, although moisture, collagen and protein contents did not differ among the groups, if compared with NORM, higher lipid levels were found in SEV muscles, whereas MOD had intermediate values. On the other hand, both MOD and SEV exhibited lower ash content. Despite these variations in proximate composition, both water holding and binding capacities of turkey breast meat were not affected by WS. Indeed, quality traits of raw (pH, colour, cooking losses and shear force) and marinated (uptake, cooking losses and shear force

  11. Discrete modes of a ferromagnetic stripe dipolarly coupled to a ferromagnetic film: a Brillouin light scattering study

    International Nuclear Information System (INIS)

    Gubbiotti, G; Tacchi, S; Carlotti, G; Ono, T; Roussigne, Y; Tiberkevich, V S; Slavin, A N

    2007-01-01

    Spin wave excitations in a magnetic structure consisting of a series of long permalloy stripes of a rectangular cross section magnetized along the stripe length and situated above a continuous permalloy film are studied both experimentally and theoretically. Stripes and continuous film are coupled by dipole-dipole interaction across 10 nm thick Cu spacers. Experimental measurements made using the Brillouin light scattering technique (with the light wavevector oriented along the stripe width) provide evidence for one dispersive spin wave mode associated with the continuous film and several discrete non-dispersive modes resonating within the finite width of the stripes. To interpret the experimental spectra, an analytic theory based on the spin wave formalism for finite-width magnetic stripes has been developed, achieving a good qualitative and partly quantitative description of the experimentally observed spin wave spectrum of the system. In particular, it is explained why the presence of a continuous magnetic film near the magnetic stripe leads to a substantial decrease of the frequencies of the discrete dipolar spin wave modes localized within the stripes. A more quantitative description of the measured frequencies and of the spatial profiles of the spin wave eigenmodes has been obtained by numerical calculations performed using a finite element method

  12. Checkerboard local density of states in striped domains pinned by vortices

    DEFF Research Database (Denmark)

    Andersen, B.M.; Hedegård, P.; Bruus, Henrik

    2003-01-01

    We discuss recent elastic neutron scattering and scanning tunneling experiments on high-T-c cuprates exposed to an applied magnetic field. Antiferromagnetic vortex cores operating as pinning centers for surrounding stripes is qualitatively consistent with the neutron data provided the stripes have...... the antiphase modulation. Within a Green's function formalism we study the low energy electronic structure around the vortices and find that besides the dispersive quantum interference there exists a non-dispersive checkerboard interference pattern consistent with recent scanning tunneling measurements. Thus...

  13. Magnetic anisotropy of two-dimensional nanostructures: Transition-metal triangular stripes

    International Nuclear Information System (INIS)

    Dorantes-Davila, J.; Villasenor-Gonzalez, P.; Pastor, G.M.

    2005-01-01

    The magnetic anisotropy energy (MAE) of one-dimensional stripes having infinite length and triangular lateral structure are investigated in the framework of a self-consistent tight-binding method. One observes discontinuous changes in the easy magnetization direction along the crossover from one to two dimensions. The MAE oscillates as a function of stripe width and depends strongly on the considered transition metal (TM). The MAE of the two-leg ladder is strongly reduced as compared to that of the monoatomic chain and the convergence to the two-dimensional limit is rather slow

  14. Magnetic anisotropy of two-dimensional nanostructures: Transition-metal triangular stripes

    Energy Technology Data Exchange (ETDEWEB)

    Dorantes-Davila, J. [Instituto de Fisica, Universidad Autonoma de San Luis Potosi, San Luis Potosi (Mexico)]. E-mail: jdd@ifisica.uaslp.mx; Villasenor-Gonzalez, P. [Instituto de Fisica, Universidad Autonoma de San Luis Potosi, San Luis Potosi (Mexico); Pastor, G.M. [Laboratoire de Physique Quantique, Centre National de la Recherche Scientifique, Universite Paul Sabatier, Toulouse (France)

    2005-07-15

    The magnetic anisotropy energy (MAE) of one-dimensional stripes having infinite length and triangular lateral structure are investigated in the framework of a self-consistent tight-binding method. One observes discontinuous changes in the easy magnetization direction along the crossover from one to two dimensions. The MAE oscillates as a function of stripe width and depends strongly on the considered transition metal (TM). The MAE of the two-leg ladder is strongly reduced as compared to that of the monoatomic chain and the convergence to the two-dimensional limit is rather slow.

  15. Feshbach shape resonance for high Tc pairing in superlattices of quantum stripes and quantum wells

    Directory of Open Access Journals (Sweden)

    A Bianconi

    2006-09-01

    Full Text Available   The Feshbach shape resonances in the interband pairing in superconducting superlattices of quantum wells or quantum stripes is shown to provide the mechanism for high Tc superconductivity. This mechanism provides the Tc amplification driven by the architecture of material: superlattices of quantum wells (intercalated graphite or diborides and superlattices of quantum stripes (doped high Tc cuprate perovskites where the chemical potential is tuned to a Van Hove-Lifshitz singularity (vHs in the electronic energy spectrum of the superlattice associated with the change of the Fermi surface dimensionality in one of the subbands.

  16. Partial resistance to stripe rust and its effect on sustainability of wheat yield

    International Nuclear Information System (INIS)

    Qamar, M.; Din, R.U.; Gardazi, D.A.

    2014-01-01

    Stripe rust (Puccinia striiformis Westend. f. sp. tritici) poses a serious threat to wheat production in cooler areas of Pakistan. The 70% area of wheat in Pakistan is prone to stripe rust disease. It can cause 10-17% yield losses if susceptible cultivars are planted under favorable conditions. Level of partial plant resistance in bread wheat and its impact on sustainable wheat production was studied at the National Agricultural Research Centre, Islamabad under natural conditions in the field. Eleven Pakistani commercial wheat cultivars/advance lines including check (Inqalab 91) were assessed for the level of partial resistance against stripe rust using Area Under the Disease Progress Curve (AUDPC), disease severity (DS) and epidemic growth rate in comparison with wheat cultivar, Inqalab 91. During 2007 cropping season, natural epidemic was developed and relative AUDPC was recorded from 0 to 100% whereas the 2008 cropping season was dry and no stripe rust appeared. Two advanced lines (NR 268 and NR 285) showed the infection type (IT) less than 7 (incompatible reaction) to the mixture of prevailing stripe rust inoculums. Very low level of DS and AUDPC were recorded in the remaining cultivars/lines indicating a high level of partial resistance to stripe rust compared to the susceptible check cultivar, Inqalab 91. Among eight cultivars/lines that showed compatible type of reaction (IT greater then equal to 7), one was resistant (relative AUDPC = 20% of Inqalab 91) and six showed very high resistance levels (relative AUDPC greater then equal to 5%). Maximum level of resistance (relative AUDPC = 0.1%) was observed in advanced line, NR 271. The wheat cultivars/lines that showed a slow disease development (low DS and AUDPC), could be considered as -1 partially resistant for stripe rust infection. The yield (2178 kg ha) of susceptible check cultivar Inqalab-91 during 2007 was reduced to 45% as -1 compared to its yield (3945 kg ha) in epidemic free year (2008). Thus the use

  17. Evaluation of thermal striping risks: Limitation of cracks initiation and propagation

    International Nuclear Information System (INIS)

    Drubay, B.; Acker, D.

    1994-01-01

    Thermal striping is the effect of a rapid random oscillation of surface temperature inducing a corresponding fluctuation of surface strains. It occurs on components situated in the mixing zone of coolant streams of different temperatures and is characterised by large numbers of strain cycles having the potential to add to the fatigue damage produced by strain cycles associated with all other plant operating events. The purpose of this paper is to describe the R and D works performed in the frame of the European Fast Reactor project between 1985 and 1992 on the thermal striping: experimental works and validation of assessment methodology. (author)

  18. Sonographic anatomy of the newborn hip and high-resolution US equipments: internal capsular stripe and perichondral gap

    International Nuclear Information System (INIS)

    Ortore, P.; Fodor, G.; Psenner, F.; Stuefert, S.; Scherer, M.

    1991-01-01

    The use of high-resolution US equipments in the examination of the newborn hip allowed the evaluation of a thin echogenic stripe (the internal capsule stripe), which defines laterally the acetabular hyaline cartilage. By means of an anatomo-histological preparation the echogenic stripe can be related to either the capsular circular fibres or the interface between the latter and the hyaline cartilage. The internal capsular stripe, together with the echogenic synovial stripe, precisely delimit the whole acetabular hyaline cartilage. Further-more, in many babies high-resolution US sometimes fails to demonstrate Graft's 'perichondral gap', so that an accurate anatomic knowledge of the hip becomes necessary in the evaluation of acetabular labrum

  19. Otolith reading and multi-model inference for improved estimation of age and growth in the gilthead seabream Sparus aurata (L.)

    Science.gov (United States)

    Mercier, Lény; Panfili, Jacques; Paillon, Christelle; N'diaye, Awa; Mouillot, David; Darnaude, Audrey M.

    2011-05-01

    Accurate knowledge of fish age and growth is crucial for species conservation and management of exploited marine stocks. In exploited species, age estimation based on otolith reading is routinely used for building growth curves that are used to implement fishery management models. However, the universal fit of the von Bertalanffy growth function (VBGF) on data from commercial landings can lead to uncertainty in growth parameter inference, preventing accurate comparison of growth-based history traits between fish populations. In the present paper, we used a comprehensive annual sample of wild gilthead seabream ( Sparus aurata L.) in the Gulf of Lions (France, NW Mediterranean) to test a methodology improving growth modelling for exploited fish populations. After validating the timing for otolith annual increment formation for all life stages, a comprehensive set of growth models (including VBGF) were fitted to the obtained age-length data, used as a whole or sub-divided between group 0 individuals and those coming from commercial landings (ages 1-6). Comparisons in growth model accuracy based on Akaike Information Criterion allowed assessment of the best model for each dataset and, when no model correctly fitted the data, a multi-model inference (MMI) based on model averaging was carried out. The results provided evidence that growth parameters inferred with VBGF must be used with high caution. Hence, VBGF turned to be among the less accurate for growth prediction irrespective of the dataset and its fit to the whole population, the juvenile or the adult datasets provided different growth parameters. The best models for growth prediction were the Tanaka model, for group 0 juveniles, and the MMI, for the older fish, confirming that growth differs substantially between juveniles and adults. All asymptotic models failed to correctly describe the growth of adult S. aurata, probably because of the poor representation of old individuals in the dataset. Multi

  20. Inheritance of trunk striping in the Sumatran tiger barb, Barbus tetrazona.

    Science.gov (United States)

    Frankel, J S

    1985-01-01

    The Sumatran tiger barb, Barbus tetrazona, exhibits three truck (pelvic) striping phenotypes: complete, incomplete, and half banded. Segregation patterns observed in the progeny from 12 different matings indicate that the inheritance of these phenotypes is controlled by two autosomal gene loci acting additively, with complete dominance at each locus.

  1. Helminths of sympatric striped, hog-nosed, and spotted skunks in west-central Texas.

    Science.gov (United States)

    Neiswenter, Sean A; Pence, Danny B; Dowler, Robert C

    2006-07-01

    Twenty-eight hog-nosed skunks (Conepatus leuconotus), 23 striped skunks (Mephitis mephitis), and nine spotted skunks (Spilogale gracilis) from an area of sympatry in west-central Texas were examined for helminth parasites. Shared helminth species among all three host species were one nematode (Physaloptera maxillaris), two acanthocephalans (Pachysentis canicola, Macracanthorhynchus ingens), and one cestode (Mathevotaenia mephitis). Two nematodes (Gongylonema sp. and Filaria taxidaea) occurred in both the striped and hog-nosed skunks. One nematode (Filaroides milksi) and one acanthocephalan (Oncicola canis) were collected only from C. leuconotus. The most common helminth infections for striped and hog-nosed skunks were P. maxillaris and P. canicola. Helminth species richness was highest in hog-nosed skunks, but striped skunks had the highest prevalences and intensities of all the common helminth species. The helminth fauna of spotted skunks was markedly depauperate in terms of species richness and helminth abundance compared to the other two host species. Differences in helminth communities across these three sympatric skunks may be related to differences in their relative abundance, behavior, food habits, and geographic range.

  2. Improving sustainability of striped catfish (Pangasianodon hypophthalmus) farming in the Mekong Delta, Vietnam through recirculation technology

    NARCIS (Netherlands)

    Nguyen, Nhut

    2016-01-01

    The aim of this thesis was to document improvements in sustainability indicators of striped catfish (Pangasianodon hypophthalmus, Sauvage, 1878) production through the application of recirculation and waste treatment techniques. To be able to document improvements in sustainability, in each

  3. 3D Measurement Technology by Structured Light Using Stripe-Edge-Based Gray Code

    International Nuclear Information System (INIS)

    Wu, H B; Chen, Y; Wu, M Y; Guan, C R; Yu, X Y

    2006-01-01

    The key problem of 3D vision measurement using triangle method based on structured light is to acquiring projecting angle of projecting light accurately. In order to acquire projecting angle thereby determine the corresponding relationship between sampling point and image point, method for encoding and decoding structured light based on stripe edge of Gray code is presented. The method encoded with Gray code stripe and decoded with stripe edge acquired by sub-pixel technology instead of pixel centre, so latter one-bit decoding error was removed. Accuracy of image sampling point location and correspondence between image sampling point and object sampling point achieved sub-pixel degree. In addition, measurement error caused by dividing projecting angle irregularly by even-width encoding stripe was analysed and corrected. Encoding and decoding principle and decoding equations were described. Finally, 3dsmax and Matlab software were used to simulate measurement system and reconstruct measured surface. Indicated by experimental results, measurement error is about 0.05%

  4. Hypoxia tolerance and partitioning of bimodal respiration in the striped catfish (Pangasianodon hypophthalmus)

    DEFF Research Database (Denmark)

    Lefevre, Sjannie; Huong, Do Thi Thanh; Wang, Tobias

    2011-01-01

    Air-breathing fish are common in the tropics, and their importance in Asian aquaculture is increasing, but the respiratory physiology of some of the key species such as the striped catfish, Pangasianodon hypophthalmus Sauvage 1878 is unstudied. P. hypophthalmus is an interesting species as it app...

  5. The effect of freezing rate on the quality of Striped Bass Spermatozoa

    Science.gov (United States)

    Several studies have been conducted in an attempt to determine the optimal freezing rate for the cryopreservation of striped bass (Morone saxatilis) spermatozoa. In this study, the effects of freezing rate (-10, -15, -20 and -40oC/minute) on gamete quality including, viability, motion characteristi...

  6. Variation in the timing of reproduction of the four-striped field mouse ...

    African Journals Online (AJOL)

    We used the four-striped field mouse, Rhabdomys pumilio (Sparrmann, 1784), to test the hypothesis that reproduction in a small, short-lived mammal will be opportunistic, characterized by temporal and spatial variation in the timing of events, and only be inhibited under harsh and predictable winter conditions. Field mice ...

  7. Genetic analysis and location of gene for resistance to stripe rust in ...

    Indian Academy of Sciences (India)

    2013-08-06

    Aug 6, 2013 ... to rust race CYR26. The gene YrSD in Strube Dickkopf resistant to stripe rust CYR26 using SSR method was located on chromosome 5B. There are four pairs (Wmc640,. Barc59, Wmc783 and Wms497) polymorphic SSR primers on chromosome 5B which produced polymorphic DNA bands between the ...

  8. Luminous Obscured AGN Unveiled in the Stripe 82 X-ray Survey

    Science.gov (United States)

    LaMassa, Stephanie; Glikman, Eilat; Brusa, Marcella; Rigby, Jane; Tasnim Ananna, Tonima; Stern, Daniel; Lira, Paulina; Urry, Meg; Salvato, Mara; Alexandroff, Rachael; Allevato, Viola; Cardamone, Carolin; Civano, Francesca Maria; Coppi, Paolo; Farrah, Duncan; Komossa, S.; Lanzuisi, Giorgio; Marchesi, Stefano; Richards, Gordon; Trakhtenbrot, Benny; Treister, Ezequiel

    2018-01-01

    Stripe 82X is a wide-area (30 deg2) X-ray survey overlapping the legacy Sloan Digital Sky Survey (SDSS) Stripe 82 field, designed to uncover rare, high luminosity active galactic nuclei (AGN). We report on the results of an on-going near-infrared (NIR) spectroscopic campaign to follow-up reddened AGN candidates with Palomar TripleSpec, Keck NIRSPEC, and Gemini GNIRS. We identified 8 AGN in our bright NIR sample (K colors (> 4, Vega); four of these sources had existing optical spectra in SDSS. We targeted four out of 34 obscured AGN candidates in our faint NIR sample (K > 17, Vega), all of which are undetected in the single-epoch SDSS imaging, making them the best candidates for the most obscured and/or the most distant reddend AGN in Stripe 82X. All twelve sources are Type 1 AGN, with the FWHM of at least one permitted emission line exceeding 1300 km/s. We find that our nearly complete bright NIR sample (12/13 obscured AGN candidates have spectroscopic redshifts) is more distant (z > 0.5) than a matched sample of blue Type 1 AGN from Stripe 82X; these AGN tend to be more luminous than their blue, unobscured counterparts. Results from our pilot program of faint NIR-selected obscured AGN candidates demonstrate that our selection recovers reddened quasars missed by SDSS.

  9. Quantifying sustainability indicators in striped catfish Pangasianodon hypophthalmus downstream and upstream ponds

    NARCIS (Netherlands)

    Nhut, N.; Hao, N.V.; Bosma, R.H.; Verreth, J.A.V.; Verdegem, M.C.J.; Eding, E.H.

    2017-01-01

    To assess the potential for improving sustainability and efficiency in an important Vietnamese finfish culture, we quantified sustainability indicators for 2 downstream and 2 upstream 3 to 4 m deep ponds for striped catfish Pangasianodon hypophthalmus (Sauvage, 1878) production along the Mekong

  10. Parallel carbon nanotube stripes in polymer thin film with remarkable conductive anisotropy.

    Science.gov (United States)

    Huang, Jinrui; Zhu, Yutian; Jiang, Wei; Yin, Jinghua; Tang, Qingxin; Yang, Xiaodong

    2014-02-12

    In our previous study ( Mao et al. J. Phys. Chem. Lett. 2013 , 4 , 43 - 47 ), we proposed a novel method, that is, the shear-flow-induced hierarchical self-assembly of two-dimensional fillers (octadecylamine-functionalized graphene) into the well-ordered parallel stripes in a polymer matrix, to fabricate the anisotropic conductive materials. In this study, we extend this method to one-dimensional multiwalled carbon nanotubes (MWCNTs). Under the induction of shear flow, the dispersed poly(styrene ethylene/butadiene-styrene) (SEBS) phase and MWCNTs can spontaneously assemble into well-ordered parallel stripes in the polypropylene (PP) thin film. The electrical measurements indicate that the electrical resistivity in the direction parallel to the stripes is almost 6 orders of magnitude lower than that in the perpendicular direction, which is by far the most striking conductive anisotropy for the plastic anisotropic conductive materials. In addition, it is found that the size of the MWCNT stripe as well as the electrical property of the resulting anisotropic conductive thin film can be well-controlled by the gap of the shear cell.

  11. Post-epizootic chronic dolphin morbillivirus infection in Mediterranean striped dolphins Stenella coeruleoalba.

    Science.gov (United States)

    Soto, Sara; Alba, Ana; Ganges, Llilianne; Vidal, Enric; Raga, Juan Antonio; Alegre, Ferrán; González, Beatriz; Medina, Pascual; Zorrilla, Irene; Martínez, Jorge; Marco, Alberto; Pérez, Mónica; Pérez, Blanca; Pérez de Vargas Mesas, Ana; Martínez Valverde, Rosa; Domingo, Mariano

    2011-10-06

    Dolphin morbillivirus (DMV) has caused 2 epizootics with high mortality rates on the Spanish Mediterranean coast, in 1990 and 2006-07, mainly affecting striped dolphins Stenella coeruleoalba. Following the first epizootic unusual DMV infections affecting only the central nervous system of striped dolphins were found, with histological features similar to subacute sclerosing panencephalitis and old dog encephalitis, the chronic latent localised infections caused by defective forms of measles virus and canine distemper virus, respectively. Between 2008 and 2010, monitoring by microscopic and immunohistochemical (IHC) studies of 118 striped dolphins stranded along Catalonia, the Valencia Region and Andalusia showed similar localised DMV nervous system infections in 25.0, 28.6 and 27.4% of cases, respectively, with no significant differences among regions or sex. The body length of DMV-infected dolphins was statistically greater than that of non-infected dolphins (196.5 vs. 160.5 cm; p dolphins with positive IHC-DMV had positive PCR results. All 6 cases were positive with the 78 bp RT-PCR. These findings contraindicate the use of the 429 bp RT-PCR protocol based on the P gene to detect this specific form of DMV. DMV localised nervous infection constitutes the most relevant single cause of stranding and death in Mediterranean striped dolphins in the years following a DMV epizootic, and it might even overwhelm the effects of the epizootic itself, at least in 2007.

  12. Genetics of adult plant stripe rust resistance in CSP44, a selection ...

    Indian Academy of Sciences (India)

    Unknown

    areas of temperate zones (Johnson 1988). Yield losses can be considerable, ranging from about 40 per cent to com- plete destruction of the crop depending upon the growth stage at which the disease attacks. Using diverse genes for resistance against stripe rust disease is the most eco- nomical and environmentally safe ...

  13. Molecular mapping of a stripe rust resistance gene in wheat line C51

    Indian Academy of Sciences (India)

    Stripe rust, a major disease in areas where cool temperatures prevail, can strongly influence grain yield. To control this disease, breeders have incorporated seedling resistance genes from a variety of sources outside the primary wheat gene pool. The wheat line C51, introduced from the International Center for Agricultural ...

  14. VICS82: The VISTA–CFHT Stripe 82 Near-infrared Survey

    Science.gov (United States)

    Geach, J. E.; Lin, Y.-T.; Makler, M.; Kneib, J.-P.; Ross, N. P.; Wang, W.-H.; Hsieh, B.-C.; Leauthaud, A.; Bundy, K.; McCracken, H. J.; Comparat, J.; Caminha, G. B.; Hudelot, P.; Lin, L.; Van Waerbeke, L.; Pereira, M. E. S.; Mast, D.

    2017-07-01

    We present the VISTA–CFHT Stripe 82 (VICS82) survey: a near-infrared (J+Ks) survey covering 150 square degrees of the Sloan Digital Sky Survey (SDSS) equatorial Stripe 82 to an average depth of J = 21.9 AB mag and Ks = 21.4 AB mag (80% completeness limits; 5σ point-source depths are approximately 0.5 mag brighter). VICS82 contributes to the growing legacy of multiwavelength data in the Stripe 82 footprint. The addition of near-infrared photometry to the existing SDSS Stripe 82 coadd ugriz photometry reduces the scatter in stellar mass estimates to δ {log}({M}\\star )≈ 0.3 dex for galaxies with {M}\\star > {10}9 {M}ȯ at z≈ 0.5, and offers improvement compared to optical-only estimates out to z≈ 1, with stellar masses constrained within a factor of approximately 2.5. When combined with other multiwavelength imaging of the Stripe, including moderate-to-deep ultraviolet (GALEX), optical and mid-infrared (Spitzer-IRAC) coverage, as well as tens of thousands of spectroscopic redshifts, VICS82 gives access to approximately 0.5 Gpc3 of comoving volume. Some of the main science drivers of VICS82 include (a) measuring the stellar mass function of {L}\\star galaxies out to z∼ 1; (b) detecting intermediate-redshift quasars at 2≲ z≲ 3.5; (c) measuring the stellar mass function and baryon census of clusters of galaxies, and (d) performing cross-correlation experiments of cosmic microwave background lensing in the optical/near-infrared that link stellar mass to large-scale dark matter structure. Here we define and describe the survey, highlight some early science results, and present the first public data release, which includes an SDSS-matched catalog as well as the calibrated pixel data themselves.

  15. Measurement Error Affects Risk Estimates for Recruitment to the Hudson River Stock of Striped Bass

    Directory of Open Access Journals (Sweden)

    Dennis J. Dunning

    2002-01-01

    Full Text Available We examined the consequences of ignoring the distinction between measurement error and natural variability in an assessment of risk to the Hudson River stock of striped bass posed by entrainment at the Bowline Point, Indian Point, and Roseton power plants. Risk was defined as the probability that recruitment of age-1+ striped bass would decline by 80% or more, relative to the equilibrium value, at least once during the time periods examined (1, 5, 10, and 15 years. Measurement error, estimated using two abundance indices from independent beach seine surveys conducted on the Hudson River, accounted for 50% of the variability in one index and 56% of the variability in the other. If a measurement error of 50% was ignored and all of the variability in abundance was attributed to natural causes, the risk that recruitment of age-1+ striped bass would decline by 80% or more after 15 years was 0.308 at the current level of entrainment mortality (11%. However, the risk decreased almost tenfold (0.032 if a measurement error of 50% was considered. The change in risk attributable to decreasing the entrainment mortality rate from 11 to 0% was very small (0.009 and similar in magnitude to the change in risk associated with an action proposed in Amendment #5 to the Interstate Fishery Management Plan for Atlantic striped bass (0.006— an increase in the instantaneous fishing mortality rate from 0.33 to 0.4. The proposed increase in fishing mortality was not considered an adverse environmental impact, which suggests that potentially costly efforts to reduce entrainment mortality on the Hudson River stock of striped bass are not warranted.

  16. Estimating abundance of adult striped bass in reservoirs using mobile hydroacoustics

    Science.gov (United States)

    Hightower, Joseph E.; Taylor, J. Christopher; Degan, Donald J.

    2013-01-01

    Hydroacoustic surveys have proven valuable for estimating reservoir forage fish abundance but are more challenging for adult predators such as striped bass Morone saxatilis. Difficulties in assessing striped bass in reservoirs include their low density and the inability to distinguish species with hydroacoustic data alone. Despite these difficulties, mobile hydroacoustic surveys have potential to provide useful data for management because of the large sample volume compared to traditional methods such as gill netting and the ability to target specific areas where striped bass are aggregated. Hydroacoustic estimates of reservoir striped bass have been made using mobile surveys, with data analysis using a threshold for target strength in order to focus on striped bass-sized targets, and auxiliary sampling with nets to obtain species composition. We provide recommendations regarding survey design, based in part on simulations that provide insight on the level of effort that would be required to achieve reasonable estimates of abundance. Future surveys may be able to incorporate telemetry or other sonar techniques such as side-scan or multibeam in order to focus survey efforts on productive habitats (within lake and vertically). However, species apportionment will likely remain the main source of error, and we see no hydroacoustic system on the horizon that will identify fish by species at the spatial and temporal scale required for most reservoir surveys. In situations where species composition can be reliably assessed using traditional gears, abundance estimates from hydroacoustic methods should be useful to fishery managers interested in developing harvest regulations, assessing survival of stocked juveniles, identifying seasonal aggregations, and examining predator–prey balance.

  17. Remapping of the stripe rust resistance gene Yr10 in common wheat.

    Science.gov (United States)

    Yuan, Cuiling; Wu, Jingzheng; Yan, Baiqiang; Hao, Qunqun; Zhang, Chaozhong; Lyu, Bo; Ni, Fei; Caplan, Allan; Wu, Jiajie; Fu, Daolin

    2018-02-23

    Yr10 is an important gene to control wheat stripe rust, and the search for Yr10 needs to be continued. Wheat stripe rust or yellow rust is a devastating fungal disease caused by Puccinia striiformis f. sp. tritici (Pst). Host disease resistance offers a primary source for controlling wheat stripe rust. The stripe rust resistance gene Yr10 confers the race-specific resistance to most tested Pst races in China including CYR29. Early studies proposed that Yr10 was a nucleotide-binding site, leucine-rich repeat gene archived as GenBank accession AF149112 (hereafter designated the Yr10 candidate gene or Yr10 CG ). In this study, we revealed that 15 Chinese wheat cultivars positive for Yr10 CG are susceptible to CYR29. We then expressed the Yr10 CG cDNA in the common wheat 'Bobwhite'. The Yr10 CG -cDNA positive transgenic plants were also susceptible to CYR29. Thus, it is highly unlikely that Yr10 CG corresponds to the Yr10 resistance gene. Using the Yr10 donor 'Moro' and the Pst-susceptible wheat 'Huixianhong', we generated two F 3 populations that displayed a single Mendelian segregation on the Yr10 gene, and used them to remap the Yr10 gene. Six markers were placed in the Yr10 region, with the Yr10 CG gene now mapping about 1.2-cM proximal to the Yr10 locus and the Xsdauw79 marker is completely linked to the Yr10 locus. Apparently, the Yr10 gene has not yet been identified. Fine mapping and positional cloning of Yr10 is important for gene pyramiding for stripe rust resistance in wheat.

  18. Evidence for Increased Aggressiveness in a Recent Widespread Strain of Puccinia striiformis f. sp. tritici Causing Stripe Rust of Wheat

    DEFF Research Database (Denmark)

    Milus, Eugene A; Kristensen, Kristian; Hovmøller, Mogens S

    2009-01-01

    Stripe rust (yellow rust) of wheat, caused by Puccinia striiformis f. sp. tritici, has become more severe in eastern United States, Australia, and elsewhere since 2000. Recent research has shown that this coincided with a global spread of two closely related strains that were similar based...... to the warm temperature regime for all variables. Based on these results and previously published models for stripe rust epidemics, recent severe stripe rust epidemics were most likely enhanced by the pathogen's increased aggressiveness, especially at higher temperature. Furthermore, these results demonstrate...... that wheat rust fungi can adapt to warmer temperatures and cause severe disease in previously unfavorable environments...

  19. Early osteological development of white perch and striped bass with emphasis on identification of their larvae. [Morone saxatilis; Morone americana

    Energy Technology Data Exchange (ETDEWEB)

    Fritzsche, R.A. (Univ. of Mississippi, University); Johnson, G.D.

    1980-07-01

    A cartilage and bone straining technique was employed to study the developmental osteology of the striped bass (Morone saxatilis) and white perch (Morone americana). Special attention was given to those osteological characters that appeared to be unique to the larvae of each species. Larval striped bass and white perch exhibited diagnostic differences in the position and shape of the median ethmoid, predorsal bones, dorsal- and anal-fin pterygiophores, vertebral column, and caudal skeleton. These differences were discernible at the earliest appearance of these elements as cartilage, and allow identification of striped bass and white perch larvae above a length of about 7.5 mm.

  20. Population Genetics of red striped mullet (Mullus surmuletus in Turkish Seas Based on Mitochondrial and Nuclear DNA data

    Directory of Open Access Journals (Sweden)

    Fevzi Bardakci

    2014-07-01

    This study was determined a preview of genetic structure of red striped mullet because of few sampling localities so a further study is would be useful to determine its population structure along its distribution area in detail.

  1. Technological quality, mineral profile, and sensory attributes of broiler chicken breasts affected by White Striping and Wooden Breast myopathies.

    Science.gov (United States)

    Tasoniero, G; Cullere, M; Cecchinato, M; Puolanne, E; Dalle Zotte, A

    2016-11-01

    The aim of the research was to study the impact of white striping and wooden breast myopathies on the technological quality, mineral, and sensory profile of poultry meat. With this purpose, a total of 138 breasts were selected for a control group with normal breasts (N), a group of breasts characterised by white striping (WS) myopathy, and a group of breasts having both white striping and wooden breast myopathies (WSWB). Data revealed that the simultaneous presence of the two myopathies, with respect to the WS lesion individually considered, had a further detrimental effect on pH (6.04 vs. 5.96; P white striping and wooden breast myopathies. © 2016 Poultry Science Association Inc.

  2. Identification and mapping of leaf, stem and stripe rust resistance quantitative trait loci and their interactions in durum wheat

    OpenAIRE

    Singh, A.; Pandey, M. P.; Singh, A. K.; Knox, R. E.; Ammar, K.; Clarke, J. M.; Clarke, F. R.; Singh, R. P.; Pozniak, C. J.; DePauw, R. M.; McCallum, B. D.; Cuthbert, R. D.; Randhawa, H. S.; Fetch, T. G.

    2012-01-01

    Leaf rust (Puccinia triticina Eriks.), stripe rust (Puccinia striiformis f. tritici Eriks.) and stem rust (Puccinia graminis f. sp. tritici) cause major production losses in durum wheat (Triticum turgidum L. var. durum). The objective of this research was to identify and map leaf, stripe and stem rust resistance loci from the French cultivar Sachem and Canadian cultivar Strongfield. A doubled haploid population from Sachem/Strongfield and parents were phenotyped for seedling reaction to leaf ...

  3. Race-Specific Adult-Plant Resistance in Winter Wheat to Stripe Rust and Characterization of Pathogen Virulence Patterns.

    Science.gov (United States)

    Milus, Eugene A; Moon, David E; Lee, Kevin D; Mason, R Esten

    2015-08-01

    Stripe rust, caused by Puccinia striiformis f. sp. tritici, is an important disease of wheat in the Great Plains and southeastern United States. Growing resistant cultivars is the preferred means for managing stripe rust, but new virulence in the pathogen population overcomes some of the resistance. The objectives of this study were to characterize the stripe rust resistance in contemporary soft and hard red winter wheat cultivars, to characterize the virulence of P. striiformis f. sp. tritici isolates based on the resistances found in the cultivars, and to determine wheat breeders' perceptions on the importance and methods for achieving stripe rust resistance. Seedlings of cultivars were susceptible to recent isolates, indicating they lacked effective all-stage resistance. However, adult-plants were resistant or susceptible depending on the isolate, indicating they had race-specific adult-plant resistance. Using isolates collected from 1990 to 2013, six major virulence patterns were identified on adult plants of twelve cultivars that were selected as adult-plant differentials. Race-specific adult-plant resistance appears to be the only effective type of resistance protecting wheat from stripe rust in eastern United States. Among wheat breeders, the importance of incorporating stripe rust resistance into cultivars ranged from high to low depending on the frequency of epidemics in their region, and most sources of stripe rust resistance were either unknown or already overcome by virulence in the pathogen population. Breeders with a high priority for stripe rust resistance made most of their selections based on adult-plant reactions in the field, whereas breeders with a low priority for resistance based selections on molecular markers for major all-stage resistance genes.

  4. [Prediction model of meteorological grade of wheat stripe rust in winter-reproductive area, Sichuan Basin, China].

    Science.gov (United States)

    Guo, Xiang; Wang, Ming Tian; Zhang, Guo Zhi

    2017-12-01

    The winter reproductive areas of Puccinia striiformis var. striiformis in Sichuan Basin are often the places mostly affected by wheat stripe rust. With data on the meteorological condition and stripe rust situation at typical stations in the winter reproductive area in Sichuan Basin from 1999 to 2016, this paper classified the meteorological conditions inducing wheat stripe rust into 5 grades, based on the incidence area ratio of the disease. The meteorological factors which were biologically related to wheat stripe rust were determined through multiple analytical methods, and a meteorological grade model for forecasting wheat stripe rust was created. The result showed that wheat stripe rust in Sichuan Basin was significantly correlated with many meteorological factors, such as the ave-rage (maximum and minimum) temperature, precipitation and its anomaly percentage, relative humidity and its anomaly percentage, average wind speed and sunshine duration. Among these, the average temperature and the anomaly percentage of relative humidity were the determining factors. According to a historical retrospective test, the accuracy of the forecast based on the model was 64% for samples in the county-level test, and 89% for samples in the municipal-level test. In a meteorological grade forecast of wheat stripe rust in the winter reproductive areas in Sichuan Basin in 2017, the prediction was accurate for 62.8% of the samples, with 27.9% error by one grade and only 9.3% error by two or more grades. As a result, the model could deliver satisfactory forecast results, and predicate future wheat stripe rust from a meteorological point of view.

  5. Multilayer graphene electro-absorption optical modulator based on double-stripe silicon nitride waveguide.

    Science.gov (United States)

    Fan, Meiyong; Yang, Huimin; Zheng, Pengfei; Hu, Guohua; Yun, Binfeng; Cui, Yiping

    2017-09-04

    A graphene electro-absorption optical modulator based on double-stripe silicon nitride waveguide is proposed and analyzed. By embedding four graphene layers in the double-stripe silicon nitride waveguide and the graphene layers co-electrode design, the total metal-graphene contact resistance can be reduced 50% and as high as 30.6GHz modulation bandwidth can be achieved theoretically. The calculated extinction ratio and figure of merit are 0.1658dB/um and 9.7, respectively. And the required switching voltage from its minimum to maximum absorption state is 3.8180V and 780.50fJ/bit power consuming can be achieved. The proposed modulator can remedy the lack of high speed modulator on the passive silicon nitride waveguide.

  6. Effect of an electric field on the properties of BN Möbius stripes

    Energy Technology Data Exchange (ETDEWEB)

    Lemos de Melo, J. [Departamento de Física, CCEN, Universidade Federal da Paraíba, Caixa Postal 5008, 58051-900 João Pessoa, PB (Brazil); Azevedo, S., E-mail: sazevedo@fisica.ufpb.br [Departamento de Física, CCEN, Universidade Federal da Paraíba, Caixa Postal 5008, 58051-900 João Pessoa, PB (Brazil); Kaschny, J.R. [Instituto Federal da Bahia, Campus Vitória da Conquista, Av. Amazonas 3150, 45075-265 Vitória da conquista, BA (Brazil)

    2014-09-15

    In the present work, we present a first-principles study on the effects of an external electric field on the structural stability and electronic properties of boron nitride Möbius stripes with armchair and zigzag chirality. The calculation results indicate that the gap energy can be remarkably reduced by the application of an external field. Such reduction is in principle attributed to the occurrence of Stark effect, which significance depends on the orientation of the applied field relative to the stripe axis. Moreover, the electric field produces significant changes on dipole momentum of the structure and induces a negative shift on the calculated total energy, reducing the obtained formation energy. - Highlights: • The gap energy is remarkably reduced by the application of an external field. • The electric field produces significant changes on dipole momentum. • The field induces a negative shift on the total energy due to Stark effect.

  7. On fast iterative mapping algorithms for stripe based coarse-grained reconfigurable architectures

    Science.gov (United States)

    Mehta, Gayatri; Patel, Krunalkumar; Pollard, Nancy S.

    2015-01-01

    Reconfigurable devices have potential for great flexibility/efficiency, but mapping algorithms onto these architectures is a long-standing challenge. This paper addresses this challenge for stripe based coarse-grained reconfigurable architectures (CGRAs) by drawing on insights from graph drawing. We adapt fast, iterative algorithms from hierarchical graph drawing to the problem of mapping to stripe based architectures. We find that global sifting is 98 times as fast as simulated annealing and produces very compact designs with 17% less area on average, at a cost of 5% greater wire length. Interleaving iterations of Sugiyama and global sifting is 40 times as fast as simulated annealing and achieves somewhat more compact designs with 1.8% less area on average, at a cost of only 1% greater wire length. These solutions can enable fast design space exploration, rapid performance testing, and flexible programming of CGRAs "in the field."

  8. Pigment cell interactions and differential xanthophore recruitment underlying zebrafish stripe reiteration and Danio pattern evolution.

    Science.gov (United States)

    Patterson, Larissa B; Bain, Emily J; Parichy, David M

    2014-11-06

    Fishes have diverse pigment patterns, yet mechanisms of pattern evolution remain poorly understood. In zebrafish, Danio rerio, pigment-cell autonomous interactions generate dark stripes of melanophores that alternate with light interstripes of xanthophores and iridophores. Here, we identify mechanisms underlying the evolution of a uniform pattern in D. albolineatus in which all three pigment cell classes are intermingled. We show that in this species xanthophores differentiate precociously over a wider area, and that cis regulatory evolution has increased expression of xanthogenic Colony Stimulating Factor-1 (Csf1). Expressing Csf1 similarly in D. rerio has cascading effects, driving the intermingling of all three pigment cell classes and resulting in the loss of stripes, as in D. albolineatus. Our results identify novel mechanisms of pattern development and illustrate how pattern diversity can be generated when a core network of pigment-cell autonomous interactions is coupled with changes in pigment cell differentiation.

  9. Effect of the tiger stripes on the deformation of Saturn's moon Enceladus

    Science.gov (United States)

    Souček, Ondřej; Hron, Jaroslav; Běhounková, Marie; Čadek, Ondřej

    2016-07-01

    Enceladus is a small icy moon of Saturn with active jets of water emanating from fractures around the south pole, informally called tiger stripes, which might be connected to a subsurface water ocean. The effect of these features on periodic tidal deformation of the moon has so far been neglected because of the difficulties associated with implementation of faults in continuum mechanics models. Here we estimate the maximum possible impact of the tiger stripes on tidal deformation and heat production within Enceladus's ice shell by representing them as narrow zones with negligible frictional and bulk resistance passing vertically through the whole ice shell. Assuming a uniform ice shell thickness of 25 km, consistent with the recent estimate of libration, we demonstrate that the faults can dramatically change the distribution of stress and strain in Enceladus's south polar region, leading to a significant increase of the heat production in this area.

  10. Theoretical and experimental investigations of efficient light coupling with spatially varied all dielectric striped waveguides

    Science.gov (United States)

    Yilmaz, Y. A.; Tandogan, S. E.; Hayran, Z.; Giden, I. H.; Turduev, M.; Kurt, H.

    2017-07-01

    Integrated photonic systems require efficient, compact, and broadband solutions for strong light coupling into and out of optical waveguides. The present work investigates an efficient optical power transferring the problem between optical waveguides having different widths of in/out terminals. We propose a considerably practical and feasible concept to implement and design an optical coupler by introducing gradually index modulation to the coupler section. The index profile of the coupler section is modulated with a Gaussian function by the help of striped waveguides. The effective medium theory is used to replace the original spatially varying index profile with dielectric stripes of a finite length/width having a constant effective refractive index. 2D and 3D finite-difference time-domain analyzes are utilized to investigate the sampling effect of the designed optical coupler and to determine the parameters that play a crucial role in enhancing the optical power transfer performance. Comparing the coupling performance of conventional benchmark adiabatic and butt couplers with the designed striped waveguide coupler, the corresponding coupling efficiency increases from approximately 30% to 95% over a wide frequency interval. In addition, to realize the realistic optical coupler appropriate to integrated photonic applications, the proposed structure is numerically designed on a silicon-on-insulator wafer. The implemented SOI platform based optical coupler operates in the telecom wavelength regime (λ = 1.55 μm), and the dimensions of the striped coupler are kept as 9.77 μm (along the transverse to propagation direction) and 7.69 μm (along the propagation direction) where the unit distance is fixed to be 465 nm. Finally, to demonstrate the operating design principle, the microwave experiments are conducted and the spot size conversion ratio as high as 7.1:1 is measured, whereas a coupling efficiency over 60% in the frequency range of 5.0-16.0 GHz has been also

  11. Familiarity breeds contempt: effects of striped skunk color, shape, and abundance on wild carnivore behavior

    OpenAIRE

    Jennifer S. Hunter

    2009-01-01

    Multicomponent aposematic warning signals are generally accepted to function as a deterrent to predatory attacks; however, the relative importance of specific visual cues used by wild predators to recognize defended animals is poorly understood. Here, I use naturally and reciprocally colored taxidermy models of striped skunks (Mephitis mephitis) and gray foxes (Urocyon cinereoargenteus) to explore the impact of aposematic coloration and body shape on the behavior of wild mammalian predators. ...

  12. Effective genes for resistance to stripe rust and virulence of Puccinia ...

    African Journals Online (AJOL)

    The results revealed that stripe rust resistance genes Yr3, Yr5, Yr10, Yr15, Yr26, YrSP and YrCV were resistant, while Yr18 showed moderate susceptibility at all locations. Genes YrA-, Yr2, Yr6, Yr7, Yr8, Yr9, Yr17, Yr27 and gene combinations Opata (Yr27+Yr18) and Super Kauz (Yr9, Yr27, Yr18) were found susceptible.

  13. Species Profiles: Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (South Atlantic). Striped Bass

    Science.gov (United States)

    1989-12-01

    the sides (Werner 1980). Osteological vomer and paiatines (Hardy 1978). differences are also evident in the three species (Woolcott 1957; Harrell 1984...Percichthyidae) by means of osteological patterns, meristics and Holland, B.F., Jr., and G.F. Yelverton. 1973. morphometrics. Ph.D. Dissertation. Uni...1957. Comparative osteology Striped Bass Subcommittee of the House of of serranid fishes of the genus Roccus Representatives. 9 pp. (Mitchill). Copeia

  14. Tiger Stripes and Cassini ISS High-Resolution Imaging of Enceladus

    Science.gov (United States)

    Helfenstein, Paul; Denk, T.; Giese, B.; McEwen, A. S.; Neukum, G.; Perry, J.; Porco, C. C.; Thomas, P. C.; Turtle, E.; Verbiscer, A.; Veverka, J.

    2008-09-01

    Deciphering the mechanisms of Enceladus’ plumes is one of the most important and challenging tasks for planetary science. Cassini has provided a wealth of data by remote and in-situ data collection, but fundamental details of the vents and their context remain elusive. Three flybys of Enceladus by Cassini in 2008, on August 11 (altitude: 50km), October 9 (30km), and October 31 (200 km) are designed to further our knowledge of Enceladus’ geology and geophysics. Anticipated data include images as good as 7 m/pixel of parts of the geologically active South Polar Terrain (SPT). We targeted six different known eruption sites (Spitale and Porco 2007, Nature 449, 695-697) along Cairo Sulcus, Baghdad Suclus, and Damascus Sulcus, as well as non-active portions of the the "tiger stripes" and bright grooved terrain in between. On each of the three flybys we also plan contiguous ISS broadband multi-spectral mosaics of the entire SPT region so that we can search for volcanically and tectonically driven temporal changes and construct detailed digital terrain maps. Previous images of the tiger stripes and other rift systems on Enceladus resolve geomorphic structures on hundred meter scales or larger. Within those resolution limits, tiger stripes are morphologically distinguished most strongly from comparably sized young looking rifts elsewhere on Enceladus by their prominent upturned flanks, the muted appearance of their surface relief, and their relative absence of distinct cliff faces, probably of solid ice along scarps. The anticipated new high-resolution images will provide critical structural details needed to identify the extent to which unique attributes of tiger stripes are caused by mantling by plume fallout, tectonic deformation, seismic disruption, or perhaps thermal processes. Here, we present a first analysis of the August 11 close flyby images.

  15. Cytogenetics and stripe rust resistance of wheat-Thinopyrum elongatum hybrid derivatives.

    Science.gov (United States)

    Li, Daiyan; Long, Dan; Li, Tinghui; Wu, Yanli; Wang, Yi; Zeng, Jian; Xu, Lili; Fan, Xing; Sha, Lina; Zhang, Haiqin; Zhou, Yonghong; Kang, Houyang

    2018-01-01

    Amphidiploids generated by distant hybridization are commonly used as genetic bridge to transfer desirable genes from wild wheat species into cultivated wheat. This method is typically used to enhance the resistance of wheat to biotic or abiotic stresses, and to increase crop yield and quality. Tetraploid Thinopyrum elongatum exhibits strong adaptability, resistance to stripe rust and Fusarium head blight, and tolerance to salt, drought, and cold. In the present study, we produced hybrid derivatives by crossing and backcrossing the Triticum durum-Th. elongatum partial amphidiploid ( Trititrigia 8801, 2 n  = 6 ×  = 42, AABBEE) with wheat cultivars common to the Sichuan Basin. By means of cytogenetic and disease resistance analyses, we identified progeny harboring alien chromosomes and measured their resistance to stripe rust. Hybrid progenies possessed chromosome numbers ranging from 40 to 47 (mean = 42.72), with 40.0% possessing 42 chromosomes. Genomic in situ hybridization revealed that the number of alien chromosomes ranged from 1 to 11. Out of the 50 of analyzed lines, five represented chromosome addition (2 n  = 44 = 42 W + 2E) and other five were chromosome substitution lines (2 n  = 42 = 40 W + 2E). Importantly, a single chromosome derived from wheat- Th. elongatum intergenomic Robertsonian translocations chromosome was occurred in 12 lines. Compared with the wheat parental cultivars ('CN16' and 'SM482'), the majority (70%) of the derivative lines were highly resistant to strains of stripe rust pathogen known to be prevalent in China. The findings suggest that these hybrid-derivative lines with stripe rust resistance could potentially be used as germplasm sources for further wheat improvement.

  16. Eliminating Vertical Stripe Defects on Silicon Steel Surface by L1/2 Regularization

    OpenAIRE

    Jing, Wenfeng; Meng, Deyu; Qiao, Chen; Peng, Zhiming

    2011-01-01

    The vertical stripe defects on silicon steel surface seriously affect the appearance and electromagnetic properties of silicon steel products. Eliminating such defects is adifficult and urgent technical problem. This paper investigates the relationship between the defects and their influence factors by classification methods. However, when the common classification methods are used in the problem, we cannot obtain a classifier with high accuracy. Byanalysis of the data set, we find that it is...

  17. Sustained eruptions on Enceladus explained by turbulent dissipation in tiger stripes

    Science.gov (United States)

    Kite, Edwin S.; Rubin, Allan M.

    2016-04-01

    Spacecraft observations suggest that the plumes of Saturn’s moon Enceladus draw water from a subsurface ocean, but the sustainability of conduits linking ocean and surface is not understood. Observations show eruptions from “tiger stripe” fissures that are sustained (although tidally modulated) throughout each orbit, and since the 2005 discovery of the plumes. Peak plume flux lags peak tidal extension by ˜1 rad, suggestive of resonance. Here, we show that a model of the tiger stripes as tidally flexed slots that puncture the ice shell can simultaneously explain the persistence of the eruptions through the tidal cycle, the phase lag, and the total power output of the tiger stripe terrain, while suggesting that eruptions are maintained over geological timescales. The delay associated with flushing and refilling of O(1)-m-wide slots with ocean water causes erupted flux to lag tidal forcing and helps to buttress slots against closure, while tidally pumped in-slot flow leads to heating and mechanical disruption that staves off slot freezeout. Much narrower and much wider slots cannot be sustained. In the presence of long-lived slots, the 106-y average power output of the tiger stripes is buffered by a feedback between ice melt-back and subsidence to O(1010) W, which is similar to observed power output, suggesting long-term stability. Turbulent dissipation makes testable predictions for the final flybys of Enceladus by Cassini. Our model shows how open connections to an ocean can be reconciled with, and sustain, long-lived eruptions. Turbulent dissipation in long-lived slots helps maintain the ocean against freezing, maintains access by future Enceladus missions to ocean materials, and is plausibly the major energy source for tiger stripe activity.

  18. Numerical investigation on thermal stratification and striping phenomena in various coolants

    International Nuclear Information System (INIS)

    Zumao Yang; Muramatsu, Toshiharu

    2000-02-01

    It is important to study thermal stratification and striping phenomena for they can induce thermal fatigue failure of structures. This presentation uses the AQUA code, which has been developed in Japan Nuclear Cycle Development Institute (JNC), to investigate the characteristics of these thermal phenomena in water, liquid sodium, liquid lead and carbon dioxide gas. There are altogether eight calculated cases with same Richardson number and initial inlet hot velocity in thermal stratification calculations, in which four cases have same velocity difference between inlet hot and cold fluid, the other four cases with same temperature difference. The calculated results show: (1) The fluid's properties and initial conditions have considerable effects on thermal stratification, which is decided by the combination of such as thermal conduction, viscous dissipation and buoyant force, etc., and (2) The gas has distinctive thermal stratification characteristics from those of liquid because for horizontal flow in the transportation of momentum and energy, the drastic exchange usually happens at the hot-cold interface for liquid, however, the buoyancy and natural convection make the quick exchange position depart from the hot-cold interface for gas. In thermal striping analysis, only the first step work has been finished. The calculated results show: (1) the vertical flow has some difference in thermal stratification characteristics from those of horizontal flow, and (2) For deep thermal striping analysis in the calculated area, more attention should be paid to the center area along Z-direction for liquid and small velocity area for gas. (author)

  19. Aleutian Disease: An Emerging Disease in Free-Ranging Striped Skunks (Mephitis mephitis) From California.

    Science.gov (United States)

    LaDouceur, E E B; Anderson, M; Ritchie, B W; Ciembor, P; Rimoldi, G; Piazza, M; Pesti, D; Clifford, D L; Giannitti, F

    2015-11-01

    Aleutian disease virus (ADV, Amdovirus, Parvoviridae) primarily infects farmed mustelids (mink and ferrets) but also other fur-bearing animals and humans. Three Aleutian disease (AD) cases have been described in captive striped skunks; however, little is known about the relevance of AD in free-ranging carnivores. This work describes the pathological findings and temporospatial distribution in 7 cases of AD in free-ranging striped skunks. All cases showed neurologic disease and were found in a 46-month period (2010-2013) within a localized geographical region in California. Lesions included multisystemic plasmacytic and lymphocytic inflammation (ie, interstitial nephritis, myocarditis, hepatitis, meningoencephalitis, pneumonia, and splenitis), glomerulonephritis, arteritis with or without fibrinoid necrosis in several organs (ie, kidney, heart, brain, and spleen), splenomegaly, ascites/hydrothorax, and/or encephalomalacia with cerebral microangiopathy. ADV infection was confirmed in all cases by specific polymerase chain reaction and/or in situ hybridization. The results suggest that AD is an emerging disease in free-ranging striped skunks in California. © The Author(s) 2014.

  20. Pathogen dynamics and morbidity of striped skunks in the absence of rabies.

    Science.gov (United States)

    Gehrt, Stanley D; Kinsel, Michael J; Anchor, Chris

    2010-04-01

    Parasites have the potential to influence the population dynamics of mammalian hosts, either as a single devastating pathogen or as a community effect. Striped skunks (Mephitis mephitis) are typically host to rabies, which often regulates population numbers. We assessed micro- and macroparasite dynamics in striped skunk populations in the absence of rabies, to determine if a single pathogen, or community, was responsible for a majority of skunk deaths. We monitored mortality due to pathogens, and prevalence of pathogens via serology and necropsy, in two populations of striped skunks in northern Illinois during 1998-2004. Transmissible pathogens requiring direct transmission (i.e., canine distemper virus, canine parvovirus) exhibited high annual variability in prevalence. In contrast, those pathogens employing a more indirect, environmental route of transmission (i.e., Leptospira interrogans and Toxoplasma gondii) appeared to exhibit relatively less annual variability in prevalence. Skunks were diagnosed with infections from an average of 4.08 (SD=2.52, n=32) species of endoparasites, with a range of 1-11. Macroparasite prevalence and intensity did not vary among seasons, or sex or age of host. Severe infections occurred with multiple parasite species, and patterns of aggregation suggested some parasite species, or more likely the parasite community, act as a limiting mechanism in skunk populations.

  1. Summer habitat selection by striped bass, Morone Saxatilis, in Cherokee Reservoir, Tennessee, 1977

    Energy Technology Data Exchange (ETDEWEB)

    Waddle, H.R.; Coutant, C.C.; Wilson, J.L.

    1980-02-01

    Summer habitat selection patterns of 18 adult striped bass (Morone saxatilis) in Cherokee Reservoir were monitored with externally attached temperature-sensing acoustic or radio transmitters from June through September 1977. Mortalities of adult striped bass in this reservoir were hypothesized to be related to high summer temperatures and low dissolved oxygen (DO). The inhabited areas or refuges differed from noninhabited areas by maintaining temperatures less than or equal to 22 C and DO concentrations greater than 5 mg/liter. Total water hardness, pH, and water transparency were not significantly different among refuges and noninhabited areas. Movement of fish outside refuges occurred more frequently and for longer periods during June when the summer pattern of high temperatures and low DO was less severe. Fish experienced temperatures between 15 and 27 C with mean temperatures of individuals ranging from 18.5 to 22.0 C. Several tagged fish migrated outside the refuges and selected the lowest available temperature, generally near 21 C, even though DO concentrations at these temperatures were 3 mg/liter or less. Long-term survival of tagged and nontagged fish outside refuges was undetermined because no fish were tracked outside a refuge for more than 12 days without being lost. This study indicates that temperature strongly influences the behavior of striped bass and that adults of this species may have a thermal preferendum of approximately 21 C.

  2. Eliminating Vertical Stripe Defects on Silicon Steel Surface by L1/2 Regularization

    Directory of Open Access Journals (Sweden)

    Wenfeng Jing

    2011-01-01

    Full Text Available The vertical stripe defects on silicon steel surface seriously affect the appearance and electromagnetic properties of silicon steel products. Eliminating such defects is adifficult and urgent technical problem. This paper investigates the relationship between the defects and their influence factors by classification methods. However, when the common classification methods are used in the problem, we cannot obtain a classifier with high accuracy. Byanalysis of the data set, we find that it is imbalanced and inconsistent. Because the common classification methods are based on accuracy-maximization criterion, they are not applicable to imbalanced and inconsistent data set. Thus, we propose asupport-degree-maximization criterion and anovel cost-sensitive loss function and also establish an improved L1/2 regularization approach for solution of the problem. Moreover, by employing reweighted iteration gradient boosting algorithm, we obtain a linear classifier with a high support degree. Through analyzing the classifier, we formulate a rule under which the silicon steel vertical stripe defects do not occur in the existing production environment. By applying the proposed rule to 50TW600 silicon steel production, the vertical stripe defects of the silicon steel products have been greatly decreased.

  3. Stripes developed at the strong limit of nematicity in FeSe film

    Science.gov (United States)

    Li, Wei; Zhang, Yan; Deng, Peng; Xu, Zhilin; Mo, S.-K.; Yi, Ming; Ding, Hao; Hashimoto, M.; Moore, R. G.; Lu, D.-H.; Chen, Xi; Shen, Z.-X.; Xue, Qi-Kun

    2017-10-01

    A single monolayer of iron selenide grown on strontium titanate shows an impressive enhancement of superconductivity compared with the bulk, as well as a novel Fermi surface topology, extreme two-dimensionality, and the possibility of phonon-enhanced electron pairing. For films thicker than one unit cell, however, the electronic structure is markedly different, with a drastically suppressed superconductivity and strong nematicity appearing. The physics driving this extraordinary dichotomy of superconducting behaviour is far from clear. Here, we use low-temperature scanning tunnelling microscopy to study multilayers of iron selenide grown by molecular beam epitaxy, and find a stripe-type charge ordering instability that develops beneath the nematic state. The charge ordering is visible and pinned in the vicinity of impurities. And as it emerges in the strong limit of nematicity, it suggests that a magnetic fluctuation with a rather small wavevector may be competing with the ordinary collinear antiferromagnetic ordering in multilayer films. The existence of stripes in iron-based superconductors, which resemble the stripe order in cuprates, not only suggests that electronic anisotropy and correlation are playing an important role, but also provides a platform for probing the complex interactions between nematicity, charge ordering, magnetism and superconductivity in high-temperature superconductors.

  4. Reduction of Uncorrelated Striping Noise—Applications for Hyperspectral Pushbroom Acquisitions

    Directory of Open Access Journals (Sweden)

    Christian Rogass

    2014-11-01

    Full Text Available Hyperspectral images are of increasing importance in remote sensing applications. Imaging spectrometers provide semi-continuous spectra that can be used for physics based surface cover material identification and quantification. Preceding radiometric calibrations serve as a basis for the transformation of measured signals into physics based units such as radiance. Pushbroom sensors collect incident radiation by at least one detector array utilizing the photoelectric effect. Temporal variations of the detector characteristics that differ with foregoing radiometric calibration cause visually perceptible along-track stripes in the at-sensor radiance data that aggravate succeeding image-based analyses. Especially, variations of the thermally induced dark current dominate and have to be reduced. In this work, a new approach is presented that efficiently reduces dark current related stripe noise. It integrates an across-effect gradient minimization principle. The performance has been evaluated using artificially degraded whiskbroom (reference and real pushbroom acquisitions from EO-1 Hyperion and AISA DUAL that are significantly covered by stripe noise. A set of quality indicators has been used for the accuracy assessment. They clearly show that the new approach outperforms a limited set of tested state-of-the-art approaches and achieves a very high accuracy related to ground-truth for selected tests. It may substitute recent algorithms in the Reduction of Miscalibration Effects (ROME framework that is broadly used to reduce radiometric miscalibrations of pushbroom data takes.

  5. Implications of white striping and wooden breast abnormalities on quality traits of raw and marinated chicken meat.

    Science.gov (United States)

    Mudalal, S; Lorenzi, M; Soglia, F; Cavani, C; Petracci, M

    2015-04-01

    One of the consequences of intense genetic selection for growth of poultry is the recent appearance of abnormalities in chicken breast muscles, such as white striping (characterised by superficial white striations) and wooden breast (characterised by pale and bulged areas with substantial hardness). The aim of this study was to evaluate the quality traits of chicken fillets affected by white striping and wooden breast abnormalities. In two replications, 192 fillets were divided into the following four classes: normal (n=48; absence of any visual defects), white striping (n=48, presence of white striations), wooden breast (n=48; diffusely presence of hardened areas) and white striping/wooden breast (n=48; fillets affected by both abnormalities). Morphology, raw meat texture and technological properties were assessed in both unprocessed (pH, colour, drip loss, cooking loss and cooked meat shear force) and marinated meat (marinade uptake, purge loss, cooking loss and cooked meat shear force). Fillets affected by white striping, wooden breast or both abnormalities exhibited higher breast weights compared with normal fillets (305.5, 298.7, 318.3 and 244.7 g, respectively; Pmeat hardness compared with both normal and the white striping abnormality, for which there was no difference. Overall, the occurrence of the individual and combined white striping and wooden breast abnormalities resulted in substantial reduction in the quality of breast meat, although these abnormalities are associated with distinct characteristics. Wooden breast fillets showed lower marinade uptake and higher cooking losses than white-striped fillets for both unprocessed and marinated meats. On the other hand, white-striped fillets showed a moderate decline in marinade and cooking yield. Fillets affected by both abnormalities had the highest (Pmeat, drip loss, purge loss and cooked meat shear force were negligible or relatively low and of little practical importance. Thus, the presence of white

  6. Hematologic and plasma chemistry RIs for cultured Striped catfish (Pangasius hypophthalmus) in recirculating aquaculture systems.

    Science.gov (United States)

    Galagarza, Oscar A; Kuhn, David D; Smith, Stephen A; Hrubec, Terry C

    2017-09-01

    Striped catfish (Pangasius hypophthalmus) is a valuable aquaculture fish species produced primarily in Southeast Asia. In the United States, it is bred as an ornamental species. Striped catfish has high productivity and great demand in numerous countries around the world, yet little is known about its normal physiology. The objective of this study was to establish hematologic and blood chemistry RIs for healthy juvenile Striped catfish. Blood samples were collected from 70 Striped catfish raised in recirculating aquaculture systems. Whole blood and plasma samples were analyzed for multiple hematologic and chemistry variables using standard techniques. The RIs for hematology were as follows: PCV 23.5-35.9%, MCV 106.3-156.6 fL, RBC count 1.79-2.75 × 10 6 cells/μL, thrombocytes 26,318-73,333 cells/μL, total WBC count 36,294-94,286 cells/μL, total lymphocytes 18,997-59,998 cells/μL, small lymphocytes 13,763-51,490 cells/μL, large lymphocytes 715-21,200 cells/μL, granulocytes 4504-18,291 cells/μL, and monocytes 0-7549 cells/μL. Plasma chemistry RIs were the following: ALP 32.7-74.6 U/L, AST 20.3-1235.8 U/L, sodium 135.2-147.7 mmol/L, potassium 3.3-5.0 mmol/L, chloride 120.1-133.6 mmol/L, calcium 2.7-3.6 mmol/L, magnesium 0.9-1.3 mmol/L, phosphorous 1.4-2.7 mmol/L, glucose 4.6-7.6 mmol/L, cholesterol 2.8-5.3 mmol/L, total protein 30-42 g/L, albumin 7-11 g/L, globulin 22-32 g/L, albumin:globulin ratio 0.27-0.37, creatinine 0-8 μmol/L, and osmolality 251.8-327.9 mOsm/kg. Reference intervals reported here can help veterinarians and fish health specialists monitor the health status of Striped catfish under recirculating aquaculture conditions for research, exhibition, and production purposes. © 2017 American Society for Veterinary Clinical Pathology.

  7. The STRIPES trial--support to rural India's public education system.

    Science.gov (United States)

    Eble, Alex; Mann, Vera; Bhakta, Preetha; Lakshminarayana, Rashmi; Frost, Chris; Elbourne, Diana; Boone, Peter

    2010-02-01

    Performance of primary school students in India lags far below government expectations, and major disparity exists between rural and urban areas. The Naandi Foundation has designed and implemented a programme using community members to deliver after-school academic support for children in over 1,100 schools in five Indian states. Assessments to date suggest that it might have a substantial effect. This trial aims to evaluate the impact of this programme in villages of rural Andhra Pradesh and will compare test scores for children in three arms: a control and two intervention arms. In both intervention arms additional after-school instruction and learning materials will be offered to all eligible children and in one arm girls will also receive an additional 'kit' with a uniform and clothes. The trial is a cluster-randomised controlled trial conducted in conjunction with the CHAMPION trial. In the CHAMPION trial 464 villages were randomised so that half receive health interventions aiming to reduce neonatal mortality. STRIPES will be introduced in those CHAMPION villages which have a public primary school attended by at least 15 students at the time of a baseline test in 2008. 214 villages of the 464 were found to fulfil above criteria, 107 belonging to the control and 107 to the intervention arm of the CHAMPION trial. These latter 107 villages will serve as control villages in the STRIPES trial. A further randomisation will be carried out within the 107 STRIPES intervention villages allocating half to receive an additional kit for girls on the top of the instruction and learning materials. The primary outcome of the trial is a composite maths and language test score. The study is designed to measure (i) whether the educational intervention affects the exam score of children compared to the control arm, (ii) if the exam scores of girls who receive the additional kit are different from those of girls living in the other STRIPES intervention arm. One of the goals of

  8. The working out of a design rule in case of structures submitted to thermal striping

    International Nuclear Information System (INIS)

    Lejeail, Y.

    1994-01-01

    Thermal striping is a complex phenomenon involving incomplete mixing of hot and cold jets of fluid near a component surface, thus submitted to random fast temperature fluctuations. Because of his nature, the zones where thermal striping can occur in a fast breeder reactor are well known; these areas can suffer fatigue damage. It has been studied by several authors and some thermomechanical design rules against this fatigue damage have been proposed. In the french point of view, the problem is the determination of the margin between the mean and the design strain controlled fatigue curves, giving the allowable maximum temperature range that a component can sustain during his life without crack initiation. The purpose of this paper is the presentation of literature results (particularly on uniaxial smooth specimens) concerning the effects of different factors such as surface finish, environment, weldments, ageing, scatter of fatigue results, prior high strain cycling...on the high temperature fatigue life, which are of first importance for the determination of design factors in case of thermal striping. The remaining question is the combination of these factors. For the analysis of thermal striping test results, it is of great interest and importance to compare the crack initiation cycles and to use a coherent strain for uniaxial and equibiaxial fatigue results, as we show in the interpretation of FAENA and SPLASH tests (performed respectively by Y. Bergamaschi and B. Marini). An analysis based on elastic calculations as proposed in the RCCMR design code gives a good correlation, despite the ambiguous choice of some coefficients in best fit analysis. This problem disappears entirely in case of high cycles/low temperature variations. Then we present a strategy for the accomplishment of simplified thermal striping tests on the FAENA sodium loop in view of acquiring a better design factor knowledge. With this experimental program, we intend to study the interaction of

  9. Assessing the Effects of Suomi NPP VIIRS M15/M16 Detector Radiometric Stability and Relative Spectral Response Variation on Striping

    Directory of Open Access Journals (Sweden)

    Zhuo Wang

    2016-02-01

    Full Text Available Modern satellite radiometers have many detectors with different relative spectral response (RSR. Effect of RSR differences on striping and the root cause of striping in sensor data record (SDR radiance and brightness temperature products have not been well studied. A previous study used MODTRAN radiative transfer model (RTM to analyze striping. In this study, we make efforts to find the possible root causes of striping. Line-by-Line RTM (LBLRTM is used to evaluate the effect of RSR difference on striping and the atmospheric dependency for VIIRS bands M15 and M16. The results show that previous study using MODTRAN is repeatable: the striping is related to the difference between band-averaged and detector-level RSR, and the BT difference has some atmospheric dependency. We also analyzed VIIRS earth view (EV data with several striping index methods. Since the EV data is complex, we further analyze the onboard calibration data. Analysis of Variance (ANOVA test shows that the noise along track direction is the major reason for striping. We also found evidence of correlation between solar diffuser (SD and blackbody (BB for detector 1 in M15. Digital Count Restoration (DCR and detector instability are possibly related to the striping in SD and EV data, but further analysis is needed. These findings can potentially lead to further SDR processing improvements.

  10. Bayesian Spatiotemporal Pattern and Eco-climatological Drivers of Striped Skunk Rabies in the North Central Plains.

    Science.gov (United States)

    Raghavan, Ram K; Hanlon, Cathleen A; Goodin, Douglas G; Davis, Rolan; Moore, Michael; Moore, Susan; Anderson, Gary A

    2016-04-01

    Striped skunks are one of the most important terrestrial reservoirs of rabies virus in North America, and yet the prevalence of rabies among this host is only passively monitored and the disease among this host remains largely unmanaged. Oral vaccination campaigns have not efficiently targeted striped skunks, while periodic spillovers of striped skunk variant viruses to other animals, including some domestic animals, are routinely recorded. In this study we evaluated the spatial and spatio-temporal patterns of infection status among striped skunk cases submitted for rabies testing in the North Central Plains of US in a Bayesian hierarchical framework, and also evaluated potential eco-climatological drivers of such patterns. Two Bayesian hierarchical models were fitted to point-referenced striped skunk rabies cases [n = 656 (negative), and n = 310 (positive)] received at a leading rabies diagnostic facility between the years 2007-2013. The first model included only spatial and temporal terms and a second covariate model included additional covariates representing eco-climatic conditions within a 4 km(2) home-range area for striped skunks. The better performing covariate model indicated the presence of significant spatial and temporal trends in the dataset and identified higher amounts of land covered by low-intensity developed areas [Odds ratio (OR) = 3.41; 95% Bayesian Credible Intervals (CrI) = 2.08, 3.85], higher level of patch fragmentation (OR = 1.70; 95% CrI = 1.25, 2.89), and diurnal temperature range (OR = 0.54; 95% CrI = 0.27, 0.91) to be important drivers of striped skunk rabies incidence in the study area. Model validation statistics indicated satisfactory performance for both models; however, the covariate model fared better. The findings of this study are important in the context of rabies management among striped skunks in North America, and the relevance of physical and climatological factors as risk factors for skunk to human rabies transmission and

  11. Bayesian Spatiotemporal Pattern and Eco-climatological Drivers of Striped Skunk Rabies in the North Central Plains.

    Directory of Open Access Journals (Sweden)

    Ram K Raghavan

    2016-04-01

    Full Text Available Striped skunks are one of the most important terrestrial reservoirs of rabies virus in North America, and yet the prevalence of rabies among this host is only passively monitored and the disease among this host remains largely unmanaged. Oral vaccination campaigns have not efficiently targeted striped skunks, while periodic spillovers of striped skunk variant viruses to other animals, including some domestic animals, are routinely recorded. In this study we evaluated the spatial and spatio-temporal patterns of infection status among striped skunk cases submitted for rabies testing in the North Central Plains of US in a Bayesian hierarchical framework, and also evaluated potential eco-climatological drivers of such patterns. Two Bayesian hierarchical models were fitted to point-referenced striped skunk rabies cases [n = 656 (negative, and n = 310 (positive] received at a leading rabies diagnostic facility between the years 2007-2013. The first model included only spatial and temporal terms and a second covariate model included additional covariates representing eco-climatic conditions within a 4 km(2 home-range area for striped skunks. The better performing covariate model indicated the presence of significant spatial and temporal trends in the dataset and identified higher amounts of land covered by low-intensity developed areas [Odds ratio (OR = 3.41; 95% Bayesian Credible Intervals (CrI = 2.08, 3.85], higher level of patch fragmentation (OR = 1.70; 95% CrI = 1.25, 2.89, and diurnal temperature range (OR = 0.54; 95% CrI = 0.27, 0.91 to be important drivers of striped skunk rabies incidence in the study area. Model validation statistics indicated satisfactory performance for both models; however, the covariate model fared better. The findings of this study are important in the context of rabies management among striped skunks in North America, and the relevance of physical and climatological factors as risk factors for skunk to human rabies

  12. Some effects of temperature, chlorine, and copper on the survival and growth of the coon stripe shrimp, Pandalus danae

    International Nuclear Information System (INIS)

    Gibson, C.I.; Thatcher, T.O.; Apts, C.W.

    1975-03-01

    The CTM (Critical Thermal Maxima) values for coon stripe shrimp increase with an increase in shrimp size. The CTM values for coon strip shrimp increase with an increase in the rate at which the temperature is elevated. Coon stripe shrimp are more resistant to chlorine when acclimated and exposed at 7.5 0 C-10 0 C than (a) when acclimated at 7.5 0 C and exposed at 15 0 C or 20 0 C, or when (b) acclimated and exposed at 15 0 C which is near their optimum short-term growth temperature (16 0 C). The optimal growing temperature for (1 to 7g) coon stripe shrimp for periods up to one month is 16 0 C. Copper at a concentration of 0.04 mg/l effectively retards the growth of (1-2g) coon stripe shrimp at 16 0 C over a one-month period. Chlorine at a concentration of 0.18 mg/l is lethal to (1-2g) coon stripe shrimp at 16 0 C and reduced their growth at 0.08 mg/l over a one-month period. (U.S.)

  13. Comparison of hematologic and serologic profiles of broiler birds with normal and severe degrees of white striping in breast fillets.

    Science.gov (United States)

    Kuttappan, V A; Huff, G R; Huff, W E; Hargis, B M; Apple, J K; Coon, C; Owens, C M

    2013-02-01

    White striping is the white striation occasionally observed parallel to the direction of muscle fibers in broiler breast fillets and thighs at the processing plant. Broiler breast fillets can be categorized as normal (NORM), moderate (MOD), or severe (SEV) based on the degree of white striping. Histologically, SEV fillets are characterized by the highest degree of degeneration of muscle fibers along with fibrosis and lipidosis when compared with NORM. The present study was undertaken to compare the hematologic and serologic profiles of broilers with NORM and SEV degrees of white striping to get more information on the systemic changes associated with the condition. Day-old male broiler chicks of a commercial strain were grown on the same diet in 6 replicate pens (n = 32 birds/pen). Blood samples (5 mL) were collected from the wing vein of each bird on the day before processing for analyzing hematologic and serologic profiles. At 63 d, the birds were weighed and processed in a commercial inline processing system. Weight of the butterfly fillets, liver, and abdominal fat pad were recorded. Left-side fillets were scored to obtain the degree of white striping for each bird. Representative samples for NORM (n = 24) and SEV (n = 17) categories were selected to compare the hematologic and serologic profiles. The SEV birds had greater (P white striping. The elevated serum enzyme levels confirm the muscle damage associated with the degenerative myopathy in SEV birds.

  14. Tagging methods for estimating population size and mortality rates of inland striped bass populations

    Science.gov (United States)

    Hightower, Joseph E.; Pollock, Kenneth H.

    2013-01-01

    Striped bass Morone saxatilis in inland reservoirs play an important role ecologically and in supporting recreational fishing. To manage these populations, biologists need information about abundance and mortality. Abundance estimates can be used to assess the effectiveness of stocking programs that maintain most reservoir striped bass populations. Mortality estimates can indicate the relative impact of fishing versus natural mortality and the need for harvest regulation. The purpose of this chapter is to evaluate tagging studies as a way of obtaining information about abundance and mortality. These approaches can be grouped into three broad categories: tag recapture, tag return, and telemetry. Tag-recapture methods are typically used to estimate population size and other demographic parameters but are often difficult to apply in large systems. A fishing tournament can be an effective way of generating tagging or recapture effort in large systems, compared to using research sampling only. Tag-return methods that rely on angler harvest and catch and release can be used to estimate fishing (F) and natural (M) mortality rates and are a practical approach in large reservoirs. The key to success in tag-return studies is to build in auxiliary studies to estimate short-term tagging mortality, short- and longterm tag loss, reporting rate, and mortality associated with catch and release. F and M can also be estimated using telemetry tags. Advantages of this approach are that angler nonreporting does not bias estimates and fish with transmitters provide useful ecological data. Cost can be a disadvantage of telemetry studies; thus, combining telemetry tags with conventional tag returns in an integrated analysis is often the optimal approach. In summary, tagging methods can be a powerful tool for assessing the effectiveness of inland striped bass stocking programs and the relative impact of fishing versus natural mortality

  15. Extended Viral Shedding of a Low Pathogenic Avian Influenza Virus by Striped Skunks (Mephitis mephitis)

    Science.gov (United States)

    Root, J. Jeffrey; Shriner, Susan A.; Bentler, Kevin T.; Gidlewski, Thomas; Mooers, Nicole L.; Ellis, Jeremy W.; Spraker, Terry R.; VanDalen, Kaci K.; Sullivan, Heather J.; Franklin, Alan B.

    2014-01-01

    Background Striped skunks (Mephitis mephitis) are susceptible to infection with some influenza A viruses. However, the viral shedding capability of this peri-domestic mammal and its potential role in influenza A virus ecology are largely undetermined. Methodology/Principal Findings Striped skunks were experimentally infected with a low pathogenic (LP) H4N6 avian influenza virus (AIV) and monitored for 20 days post infection (DPI). All of the skunks exposed to H4N6 AIV shed large quantities of viral RNA, as detected by real-time RT-PCR and confirmed for live virus with virus isolation, from nasal washes and oral swabs (maximum ≤106.02 PCR EID50 equivalent/mL and ≤105.19 PCR EID50 equivalent/mL, respectively). Some evidence of potential fecal shedding was also noted. Following necropsy on 20 DPI, viral RNA was detected in the nasal turbinates of one individual. All treatment animals yielded evidence of a serological response by 20 DPI. Conclusions/Significance These results indicate that striped skunks have the potential to shed large quantities of viral RNA through the oral and nasal routes following exposure to a LP AIV. Considering the peri-domestic nature of these animals, along with the duration of shedding observed in this species, their presence on poultry and waterfowl operations could influence influenza A virus epidemiology. For example, this species could introduce a virus to a naive poultry flock or act as a trafficking mechanism of AIV to and from an infected poultry flock to naive flocks or wild bird populations. PMID:24489638

  16. Flexible registration method for light-stripe sensors considering sensor misalignments

    Science.gov (United States)

    Gorschenew, W.; Kaestner, M.; Reithmeier, Eduard

    2017-06-01

    In many application areas such as object reconstruction or quality assurance, it is required to completely or partly measure the shape of an object or at least the cross section of the required object region. For complex geometries, therefore, multiple views are needed to bypass undercuts respectively occlusions. Hence, a multi-sensor measuring system for complex geometries has to consist of multiple light-stripe sensors that are surrounding the measuring object in order to complete the measurements in a prescribed time. The number of sensors depends on the object geometry and dimensions. In order to create a uniform 3D data set from the data of individual sensors, a registration of each individual data set into a common global coordinate system has to be performed. Stateof- the-art registration methods for light-stripe sensors use only data from object intersection with the respective laser plane of each sensor. At the same time the assumption is met that all laser planes are coplanar and that there are corresponding points in two data sets. However, this assumption does not represent the real case, because it is nearly impossible to align multiple laser planes in the same plane. For this reason, sensor misalignments are neglected by this assumption. In this work a new registration method for light-stripe sensors is presented that considers sensor misalignments as well as intended sensor displacements and tiltings. The developed method combines 3D pose estimation and triangulated data to properly register the real sensor pose in 3D space.

  17. Salinity stress, enhancing basal and induced immune responses in striped catfish Pangasianodon hypophthalmus (Sauvage).

    Science.gov (United States)

    Schmitz, Mélodie; Ziv, Tamar; Admon, Arie; Baekelandt, Sébastien; Mandiki, Syaghalirwa N M; L'Hoir, Maëlenn; Kestemont, Patrick

    2017-09-07

    In the Mekong Delta, striped catfish are faced with chronic salinity stress related to saltwater intrusion induced by global climatic changes. In this study, striped catfish juveniles were submitted to a prolonged salinity stress (up to 10ppt) over three weeks followed by infection with a virulent bacterial strain, Edwardsiella ictaluri. Osmoregulatory parameters were investigated. In addition, a label free quantitative proteomics workflow was performed on kidneys. The workflow consisted of an initial global profiling of relative peptide abundances (by LC/MS, peak area quantification based on extracted ion currents), followed by identification (by MS/MS). The aim of the study was to highlight specific functional pathways modified during realistic salinity stress, particularly those involved in immunity. In kidney proteome, 2483 proteins were identified, of which 400 proteins were differentially expressed between the freshwater and the saline water conditions. Several pathways and functional categories were highlighted, mostly related to energy metabolism, protein metabolism, actin cytoskeleton, signaling, immunity, and detoxification. In particular, the responsiveness of proteins involved in small GTPases and Mitogen Activated Protein Kinase p38 signaling, phagolysosome maturation, and T-cells regulation is discussed. In the Mekong River Delta (Vietnam), striped catfish production is threatened by extensive sea water intrusion exacerbated by sea level rise. In fish, the effect of chronic exposure to salinity stress on immune capacities and response to disease has been poorly investigated. This study aims to highlight the main molecular changes occurring in the kidney during acclimation to salinity stress, particularly those involved in the immune defences of fish. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Optical sectioning microscopes with no moving parts using a micro-stripe array light emitting diode.

    Science.gov (United States)

    Poher, V; Zhang, H X; Kennedy, G T; Griffin, C; Oddos, S; Gu, E; Elson, D S; Girkin, M; French, P M W; Dawson, M D; Neil, M A

    2007-09-03

    We describe an optical sectioning microscopy system with no moving parts based on a micro-structured stripe-array light emitting diode (LED). By projecting arbitrary line or grid patterns onto the object, we are able to implement a variety of optical sectioning microscopy techniques such as grid-projection structured illumination and line scanning confocal microscopy, switching from one imaging technique to another without modifying the microscope setup. The micro-structured LED and driver are detailed and depth discrimination capabilities are measured and calculated.

  19. Primary diffuse malignant peritoneal mesothelioma in a striped skunk (Mephitis mephitis).

    Science.gov (United States)

    Kim, Su-Min; Oh, Yeonsu; Oh, Suk-Hun; Han, Jeong-Hee

    2016-03-01

    A 10-year-old female striped skunk (Mephitis mephitis) was admitted with severe abdominal distension and lethargy. Cytological examination of the peritoneal fluid revealed activated mesothelial cells. At necropsy, numerous growing together, projecting, 2 to 20 mm in diameter tawny to white masses were scattered throughout the peritoneum including the mesentery, omentum and intestinal serosa. Microscopically, the tumor was composed of prominent papillo-tubular structures, and immunohistochemically, the spindle to polygonal-shaped tumor cells with nuclear polymorphism were strongly reactive for calretinin. Based on those diagnostic features, the neoplasia was diagnosed as malignant mesothelioma. This is the first case report of mesothelioma in the skunk.

  20. Polymorphic microsatellite markers for the striped skunk, Mephitis mephitis, and other mephitids.

    Science.gov (United States)

    Dragoo, Jerry W; Coan, Kathryn E; Moore, Kristin A; Henke, Scott E; Fleischer, Robert C; Wisely, Samantha M

    2009-01-01

    We report 10 polymorphic microsatellite loci primers developed for striped skunks (Mephitis mephitis), a widespread mesocarnivore in North America. Numbers of alleles in these loci ranged from seven to 14 and the observed heterozygosity ranged from 0.76 to 1.0. These primers will be useful for studying population dynamics of skunks where rabies is endemic and will be useful to estimate genetic relatedness among females sharing winter dens. Most of these primers amplify across species within the Mephitidae. © 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

  1. Electronic structure of a striped nickelate studied by the exact exchange for correlated electrons (EECE) approach

    KAUST Repository

    Schwingenschlögl, Udo

    2009-12-01

    Motivated by a RIXS study of Wakimoto, et al.(Phys. Rev. Lett., 102 (2009) 157001) we use density functional theory to analyze the magnetic order in the nickelate La5/3Sr1/3NiO4 and the details of its crystal and electronic structure. We compare the generalized gradient approximation to the hybrid functional approach of exact exchange for correlated electrons (EECE). In contrast to the former, the latter reproduces the insulating state of the compound and the midgap states. The EECE approach, in general, appears to be appropriate for describing stripe phases in systems with orbital degrees of freedom. Copyright © EPLA, 2009.

  2. Stripe patterns in two-dimensional systems with core-corona molecular architecture.

    Science.gov (United States)

    Malescio, Gianpietro; Pellicane, Giuseppe

    2004-08-01

    The behavior of a two-dimensional system of particles interacting through a potential consisting of a hard core surrounded by a soft repulsive corona is investigated at several densities and temperatures. We find that the competition between hard and soft repulsions gives origin to the spontaneous formation of spatial patterns resembling stripe textures. The effect of varying the hard and soft core radii ratio as well as that of adding an attractive component to the interparticle interaction is studied. The model investigated is relevant for macromolecular topologies possessing two intrinsic length scales.

  3. The IAC Stripe 82 Legacy Project: a wide-area survey for faint surface brightness astronomy

    Science.gov (United States)

    Fliri, Jürgen; Trujillo, Ignacio

    2016-02-01

    We present new deep co-adds of data taken within Stripe 82 of the Sloan Digital Sky Survey (SDSS), especially stacked to reach the faintest surface brightness limits of this data set. Stripe 82 covers 275 ° ^2 within -50° ≤ RA ≤ +60° and -1.25° ≤ Dec. ≤ +1.25°. We discuss the steps of our reduction which puts special emphasis on preserving the characteristics of the background (sky + diffuse light) in the input images using a non-aggressive sky subtraction strategy. Our reduction reaches a limit of ˜28.5 mag arcsec-2 (3σ, 10 × 10 arcsec2) in the r band. The effective surface brightness limit (50 per cent completeness for exponential light distribution) lies at ˜ 25.5 mag arcsec-2. For point sources, we reach 50 per cent completeness limits (3σ level) of (24.2, 25.2, 24.7, 24.3, 23.0) mag in (u, g, r, I, z). This is between 1.7 and 2.0 mag deeper than the single-epoch SDSS releases. The co-adds show point spread functions (PSFs) with median full width at half-maximum values ranging from 1 arcsec in I and z to 1.3 arcsec in the u band. The imaging data are made publicly available at http://www.iac.es/proyecto/stripe82. The release includes deep co-adds and representations of the PSF for each field. Additionally, we provide object catalogues with stars and galaxies confidently separated until g ˜ 23 mag. The IAC Stripe 82 co-adds offer a rather unique possibility to study the low surface brightness Universe, exemplified by the discovery of stellar streams around NGC 0426 and NGC 0936. We also discuss further science cases like stellar haloes and disc truncations, low surface brightness galaxies, the intracluster light in galaxy clusters and the diffuse emission of Galactic dust known as Galactic Cirrus.

  4. Stripe segregation and magnetic coupling in the nickelate La 5/3Sr1/3NiO4

    KAUST Repository

    Schwingenschlögl, Udo

    2009-03-02

    We investigate the consequences of the stripe formation in the nickelate La5/3Sr1/3NiO4 for the details of its crystal structure and electronic states. Our data are based on numerical simulations within density functional theory (DFT) and the generalized gradient approximation (GGA). The on-site Coulomb interaction is included in terms of the LDA+U scheme. Structure optimization of preliminary experimental data indicates a strong interaction between the structural and electronic degrees of freedom. In particular, we find a segregation of the diagonal filled stripes induced by a delicate interplay with the magnetic coupling. Beyond the cooperative effect of stripe segregation and spin order, distinct octahedral distortions are essential for the formation of an insulating state. © 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  5. Uptake, distribution, and depuration of 14C-benzene in northern anchovy, Engraulis mordax, and striped bass, Morone saxatilis

    International Nuclear Information System (INIS)

    Korn, S.; Hirsch, N.; Struhsaker, J.W.

    1976-01-01

    The uptake, distribution, and depuration of water-soluble, monocyclic hydrocarbon contained in petroleum and refined products was studied in two species of marine fish. Mature northern anchovy, Engraulis mordax, and juvenile striped bass, Morone saxatilis, were exposed to sublethal concentrations of O 14 -benzene for 48 h. Residues in tissues exhibiting a high lipid content or representing apparent major metabolic sites were measured during the exposure and afterwards when the fish were transferred to clean seawater. Fish exhibited a rapid uptake over a wide range of benzene concentrations in the water column. Accumulation in anchovy was considerably greater than in striped bass. Results indicate that the pathway of hydrocarbons through the liver, gallbladder, intestines, and colon is a major depuration route. Residues were depurated rapidly after cessation of exposure; in striped bass tissues most residues were undetectable by 7 days

  6. Study the effect of striping in two-step anodizing process on pore arrangement of nano-porous alumina

    International Nuclear Information System (INIS)

    Rahimi, M.H.; Saramad, S.; Tabaian, S.H.; Marashi, S.P.; Zolfaghari, A.; Mohammadalinezhad, M.

    2009-01-01

    Two-step anodic oxidation of aluminum is generally employed to produce the ordered porous anodized alumina (PAA). Dissolving away (striping) the oxide film after the first anodizing step plays a key role in the final arrangement of nano-pores. In this work, different striping durations between 1 and 6 h were applied to the sample that was initially anodized at a constant voltage of 40 V at 17 deg. C for 15 h. The striping duration of 3 h was realized as the optimum time for achieving the best ordering degree for the pores. Scanning electron microscopy (SEM) was used during and at the end of the process to examine the cross section and finishing surface of the specimens. Linear-angular fast Fourier transform (LA-FFT), an in-house technique based on MATLAB software, was employed to assess the ordering degree of the anodized samples.

  7. Mapping bound plasmon propagation on a nanoscale stripe waveguide using quantum dots: influence of spacer layer thickness

    Directory of Open Access Journals (Sweden)

    Chamanei S. Perera

    2015-10-01

    Full Text Available In this paper we image the highly confined long range plasmons of a nanoscale metal stripe waveguide using quantum emitters. Plasmons were excited using a highly focused 633 nm laser beam and a specially designed grating structure to provide stronger incoupling to the desired mode. A homogeneous thin layer of quantum dots was used to image the near field intensity of the propagating plasmons on the waveguide. We observed that the photoluminescence is quenched when the QD to metal surface distance is less than 10 nm. The optimised spacer layer thickness for the stripe waveguides was found to be around 20 nm. Authors believe that the findings of this paper prove beneficial for the development of plasmonic devices utilising stripe waveguides.

  8. Identification and mapping of leaf, stem and stripe rust resistance quantitative trait loci and their interactions in durum wheat.

    Science.gov (United States)

    Singh, A; Pandey, M P; Singh, A K; Knox, R E; Ammar, K; Clarke, J M; Clarke, F R; Singh, R P; Pozniak, C J; Depauw, R M; McCallum, B D; Cuthbert, R D; Randhawa, H S; Fetch, T G

    2013-02-01

    Leaf rust (Puccinia triticina Eriks.), stripe rust (Puccinia striiformis f. tritici Eriks.) and stem rust (Puccinia graminis f. sp. tritici) cause major production losses in durum wheat (Triticum turgidum L. var. durum). The objective of this research was to identify and map leaf, stripe and stem rust resistance loci from the French cultivar Sachem and Canadian cultivar Strongfield. A doubled haploid population from Sachem/Strongfield and parents were phenotyped for seedling reaction to leaf rust races BBG/BN and BBG/BP and adult plant response was determined in three field rust nurseries near El Batan, Obregon and Toluca, Mexico. Stripe rust response was recorded in 2009 and 2011 nurseries near Toluca and near Njoro, Kenya in 2010. Response to stem rust was recorded in field nurseries near Njoro, Kenya, in 2010 and 2011. Sachem was resistant to leaf, stripe and stem rust. A major leaf rust quantitative trait locus (QTL) was identified on chromosome 7B at Xgwm146 in Sachem. In the same region on 7B, a stripe rust QTL was identified in Strongfield. Leaf and stripe rust QTL around DArT marker wPt3451 were identified on chromosome 1B. On chromosome 2B, a significant leaf rust QTL was detected conferred by Strongfield, and at the same QTL, a Yr gene derived from Sachem conferred resistance. Significant stem rust resistance QTL were detected on chromosome 4B. Consistent interactions among loci for resistance to each rust type across nurseries were detected, especially for leaf rust QTL on 7B. Sachem and Strongfield offer useful sources of rust resistance genes for durum rust breeding.

  9. Evaluation of rumble stripes on low-volume rural roads in Iowa--phase I : final report, July 2009, tech transfer summary.

    Science.gov (United States)

    2009-07-01

    Objectives : Determine if rumble stripes can be used as a strategy to combat roadway departures and reduce the number of run-off-road (ROR) crashes. : Install edge line rumble stripes along the lane edge at a narrow width to avoid intruding o...

  10. The dissection and SSR mapping of a high-temperature adult-plant stripe rust resistance gene in American spring wheat cultivar Alturas

    Science.gov (United States)

    Stripe rust is one of major diseases in wheat production worldwide. The best economic and efficient method is to utilize resistant varieties. Alturas has high-temperature adult-plant resistance. In order to determine stripe rust resistance characteristics, resistance gene combination and molecular m...

  11. Reducing dietary protein in pond production of hybrid striped bass (Morone chrysops x M. saxatilis): Effects on fish performance and water quality dynamics

    Science.gov (United States)

    In previous work, we demonstrated that diets containing 40% digestible protein (DP) (45% crude protein) and 18 %lipid supplemented with Met and Lys resulted in superior performance and nutrient retentions in hybrid striped bass compared to less energy-dense diets when rearing hybrid striped bass at ...

  12. Estudo histomorfológico do músculo pectoralis de frangos de corte acometidos com white striping

    OpenAIRE

    Tamara Zinn Ferreira

    2014-01-01

    A seleção de linhagens de frangos de corte com altas taxas de crescimento e aumento de rendimento muscular vem contribuindo para o surgimento de perdas significativas na indústria avícola em decorrência de modificações anatômicas. Dentre estas alterações, destaca-se uma miopatia que se caracteriza pelo aparecimento de graus de estrias esbranquiçadas no músculo Pectoralis major, as quais seguem a direção da fibra muscular, referida como white striping. A etiologia da white striping ainda é des...

  13. A novel fungal hyperparasite of Puccinia striiformis f. sp. tritici, the causal agent of wheat stripe rust.

    Directory of Open Access Journals (Sweden)

    Gangming Zhan

    Full Text Available Puccinia striiformis f. sp. tritici (Pst, the causal fungus of wheat stripe rust, was previously reported to be infected by Lecanicillium lecanii, Microdochium nivale and Typhula idahoensis. Here, we report a novel hyperparasite on Pst. This hyperparasitic fungus was identified as Cladosporium cladosporioides (Fresen. GA de Vries based on morphological characteristics observed by light and scanning electron microscopy together with molecular data. The hyperparasite reduced the production and viability of urediniospores and, therefore, could potentially be used for biological control of wheat stripe rust.

  14. Trade-offs between reproduction and health in free-ranging African striped mice.

    Science.gov (United States)

    Schoepf, I; Pillay, N; Schradin, C

    2017-05-01

    Energy is limited and must be allocated among competing life-history traits. Reproduction is considered one of the most energetically demanding life-history stages. Therefore, the amount of energy an individual invests in reproduction might carry fitness costs through reduced energy allocation to other activities such as health maintenance. We investigated whether reproduction impacts health in the seasonally breeding African striped mouse (Rhabdomys pumilio). We measured health in individuals that reproduced (breeders) and individuals that did not reproduce (their adult offspring) and tested whether: (1) breeders' health before reproduction was similar to that of their offspring (representing a baseline); (2) breeders' health deteriorated after reproduction; (3) breeders' health after reproduction was worse than that of their offspring. We collected blood samples from 12 breeding females and 11 breeding males both at the onset and at the end of the breeding season and from 12 adult daughters and 11 adult sons that did not reproduce at the end of the breeding season. Health was assessed using serum biochemistry analysis with VetScan Abaxis. Breeders differed considerably in their health before and after reproduction, particularly in parameters associated with digestion (lower amylase in males), metabolism (lower albumin, alkaline phosphatase, creatinine and glucose), osmoregulation (lower potassium and phosphorous in females) and immunity (higher globulin and altered alanine aminotransferase). Our results suggest that with the onset of breeding striped mice shifted their energy allocation from maintaining health to reproduction, indicating that investment into reproduction carries significant health costs.

  15. Inhibitory Effect of Camptothecin against Rice Bacterial Brown Stripe Pathogen Acidovorax avenae subsp. avenae RS-2.

    Science.gov (United States)

    Dong, Qiaolin; Luo, Ju; Qiu, Wen; Cai, Li; Anjum, Syed Ishtiaq; Li, Bin; Hou, Mingsheng; Xie, Guanlin; Sun, Guochang

    2016-07-27

    Camptothecin (CPT) has anticancer, antiviral, and antifungal properties. However, there is a dearth of information about antibacterial activity of CPT. Therefore, in this study, we investigated the inhibitory effect of CPT on Acidovorax avenae subsp. avenae strain RS-2, the pathogen of rice bacterial brown stripe, by measuring cell growth, DNA damage, cell membrane integrity, the expression of secretion systems, and topoisomerase-related genes, as well as the secretion of effector protein Hcp. Results indicated that CPT solutions at 0.05, 0.25, and 0.50 mg/mL inhibited the growth of strain RS-2 in vitro, while the inhibitory efficiency increased with an increase in CPT concentration, pH, and incubation time. Furthermore, CPT treatment affected bacterial growth and replication by causing membrane damage, which was evidenced by transmission electron microscopic observation and live/dead cell staining. In addition, quantitative real-time PCR analysis indicated that CPT treatment caused differential expression of eight secretion system-related genes and one topoisomerase-related gene, while the up-regulated expression of hcp could be justified by the increased secretion of Hcp based on the ELISA test. Overall, this study indicated that CPT has the potential to control the bacterial brown stripe pathogen of rice.

  16. Inhibitory Effect of Camptothecin against Rice Bacterial Brown Stripe Pathogen Acidovorax avenae subsp. avenae RS-2

    Directory of Open Access Journals (Sweden)

    Qiaolin Dong

    2016-07-01

    Full Text Available Camptothecin (CPT has anticancer, antiviral, and antifungal properties. However, there is a dearth of information about antibacterial activity of CPT. Therefore, in this study, we investigated the inhibitory effect of CPT on Acidovorax avenae subsp. avenae strain RS-2, the pathogen of rice bacterial brown stripe, by measuring cell growth, DNA damage, cell membrane integrity, the expression of secretion systems, and topoisomerase-related genes, as well as the secretion of effector protein Hcp. Results indicated that CPT solutions at 0.05, 0.25, and 0.50 mg/mL inhibited the growth of strain RS-2 in vitro, while the inhibitory efficiency increased with an increase in CPT concentration, pH, and incubation time. Furthermore, CPT treatment affected bacterial growth and replication by causing membrane damage, which was evidenced by transmission electron microscopic observation and live/dead cell staining. In addition, quantitative real-time PCR analysis indicated that CPT treatment caused differential expression of eight secretion system-related genes and one topoisomerase-related gene, while the up-regulated expression of hcp could be justified by the increased secretion of Hcp based on the ELISA test. Overall, this study indicated that CPT has the potential to control the bacterial brown stripe pathogen of rice.

  17. Effects of the Presidente Rivera oil spill on young-of-year striped bass

    International Nuclear Information System (INIS)

    Weisberg, S.B.; Burton, W.H.; Herman, R.L.

    1990-01-01

    On 24, June 1989, approximately 300,000 gallons of No. 6 fuel oil was spilled from the tanker Presidente Rivera into the Delaware River. This paper reports that the spill occurred in the center of the striped bass nursery area, only six weeks after the prime spawning period. Toxic effects of the spill on young-of-year striped bass were investigated using in situ bioassay techniques. Seventy-five liter chambers, each containing 30 hatchery-reared fish, were moored at four locations within the spill zone and at one upstream references are. chemical analysis of the water was conducted on area. Chemical analysis of the water was conducted on Days 1, 4, and 13 of the experiment. Despite significant oil fouling on chambers, no dissolved aromatic hydrocarbons were detected in the water column. Acute mortality was not apparent, with greater than 90% survival at all stations after four days. After 13 days, survival at the station closest to the spill site was about 20% less than at the reference station

  18. Evolution and genetics of root hair stripes in the root epidermis.

    Science.gov (United States)

    Dolan, L; Costa, S

    2001-03-01

    Root hair pattern develops in a number of different ways in angiosperm. Cells in the epidermis of some species undergo asymmetric cell divisions to form a smaller daughter cell from which a hair grows, and a larger cell that forms a non-hair epidermal cell. In other species any cell in the epidermis can form a root hair. Hair cells are arranged in files along the Arabidopsis root, located in the gaps between underlying cortical cell files. Epidermal cells overlying a single cortical cell file develop as non-hair epidermal cells. Genetic analysis has identified a transcription factor cascade required for the formation of this pattern. WEREWOLF (WER) and GLABRA2 (GL2) are required for the formation of non-hair epidermal cells while CAPRICE (CPC) is required for hair cell development. Recent analyses of the pattern of epidermal cells among the angiosperms indicate that this striped pattern of cell organization evolved from non-striped ancestors independently in a number of diverse evolutionary lineages. The genetic basis for the evolution of epidermal pattern in angiosperms may now be examined.

  19. DE-STRIPING FOR TDICCD REMOTE SENSING IMAGE BASED ON STATISTICAL FEATURES OF HISTOGRAM

    Directory of Open Access Journals (Sweden)

    H.-T. Gao

    2016-06-01

    Full Text Available Aim to striping noise brought by non-uniform response of remote sensing TDI CCD, a novel de-striping method based on statistical features of image histogram is put forward. By analysing the distribution of histograms,the centroid of histogram is selected to be an eigenvalue representing uniformity of ground objects,histogrammic centroid of whole image and each pixels are calculated first,the differences between them are regard as rough correction coefficients, then in order to avoid the sensitivity caused by single parameter and considering the strong continuity and pertinence of ground objects between two adjacent pixels,correlation coefficient of the histograms is introduces to reflect the similarities between them,fine correction coefficient is obtained by searching around the rough correction coefficient,additionally,in view of the influence of bright cloud on histogram,an automatic cloud detection based on multi-feature including grey level,texture,fractal dimension and edge is used to pre-process image.Two 0-level panchromatic images of SJ-9A satellite with obvious strip noise are processed by proposed method to evaluate the performance, results show that the visual quality of images are improved because the strip noise is entirely removed,we quantitatively analyse the result by calculating the non-uniformity ,which has reached about 1% and is better than histogram matching method.

  20. The effect of environmental hypercapnia and size on nitrite toxicity in the striped catfish (Pangasianodon hypophthalmus)

    DEFF Research Database (Denmark)

    Hvas, Malthe; Damsgaard, Christian; Gam, Le Thi Hong

    2016-01-01

    Striped catfish (Pangasianodon hypophthalmus) are farmed intensively at high stocking densities in Vietnam where they are likely to encounter environmental hypercapnia as well as occasional high levels of aquatic nitrite. Nitrite competes with Cl- for uptake at the branchial HCO3-/Cl- exchanger, ...... the ambient concentration, while small fish did not. Small P. hypophthalmus instead had significantly higher plasma [nitrate], and haemoglobin concentrations, revealing greater capacity for detoxifying nitrite by oxidising it to nitrate.......Striped catfish (Pangasianodon hypophthalmus) are farmed intensively at high stocking densities in Vietnam where they are likely to encounter environmental hypercapnia as well as occasional high levels of aquatic nitrite. Nitrite competes with Cl- for uptake at the branchial HCO3-/Cl- exchanger...... to a reduced nitrite uptake. To assess the effect of hypercapnia on nitrite uptake, fish were cannulated in the dorsal aorta, allowing repeated blood sampling for measurements of haemoglobin derivatives, plasma ions and acid-base status during exposure to 0.9 mM nitrite alone and in combination with acute...

  1. STRIPING NOISE REMOVAL OF IMAGES ACQUIRED BY CBERS 2 CCD CAMERA SENSOR

    Directory of Open Access Journals (Sweden)

    E. Amraei

    2014-10-01

    Full Text Available CCD Camera is a multi-spectral sensor that is carried by CBERS 2 satellite. Imaging technique in this sensor is push broom. In images acquired by the CCD Camera, some vertical striping noise can be seen. This is due to the detectors mismatch, inter detector variability, improper calibration of detectors and low signal-to-noise ratio. These noises are more profound in images acquired from the homogeneous surfaces, which are processed at level 2. However, the existence of these noises render the interpretation of the data and extracting information from these images difficult. In this work, spatial moment matching method is proposed to modify these images. In this method, the statistical moments such as mean and standard deviation of columns in each band are used to balance the statistical specifications of the detector array to those of reference values. After the removal of the noise, some periodic diagonal stripes remain in the image where their removal by using the aforementioned method seems impossible. Therefore, to omit them, frequency domain Butterworth notch filter was applied. Finally to evaluate the results, the image statistical moments such as the mean and standard deviation were deployed. The study proves the effectiveness of the method in noise removal.

  2. Magnetostatic Green's functions for the description of spin waves in finite rectangular magnetic dots and stripes

    International Nuclear Information System (INIS)

    Guslienko, Konstantin Y.; Slavin, Andrei N.

    2011-01-01

    We present derivation of the magnetostatic Green's functions used in calculations of spin-wave spectra of finite-size non-ellipsoidal (rectangular) magnetic elements. The elements (dots) are assumed to be single domain particles having uniform static magnetization. We consider the case of flat dots, when the in-plane dot size is much larger than the dot height (film thickness), and assume the uniform distribution of the variable magnetization along the dot height. The limiting cases of magnetic waveguides with rectangular cross-section and thin magnetic stripes are also considered. The developed method of tensorial Green's functions is used to solve the Maxwell equations in the magnetostatic limit, and to represent the Landau-Lifshitz equation of motion for the magnetization of a magnetic element in a closed integro-differential form. - Highlights: → The Green's functions method is used to solve the magnetostatic equations. → Explicit Green's functions are written for thin magnetic dots and stripes. → Spin-wave frequencies for finite rectangular magnetic elements are calculated.

  3. Striped-tailed Yellow-finch nesting success in abandoned mining pits from central Brazilian cerrado

    Directory of Open Access Journals (Sweden)

    DT. Gressler

    Full Text Available Suitability of degraded areas as breeding habitats can be tested through assessment of nest predation rates. In this study we estimated nest success in relation to several potential predictors of nest survival in the Stripe-tailed Yellow-finch (Sicalis citrina breeding in abandoned mining pits at Brasília National Park. We monitored 73 nests during the 2007-breeding season. Predation was the main cause of nest failure (n = 48, 66%; while six nests were abandoned (8% and 19 nests produced young (26%. Mayfield’s daily survival rates and nest success were 0.94 and 23%, respectively. Our results from nest survival models on program MARK indicated that daily survival rates increase linearly towards the end of the breeding season and decrease as nests aged. None of the nest individual covariates we tested - nest height, nest size, nest substrate, and edge effect - were important predictors of nest survival; however, nests placed on the most common plant tended to have higher survival probabilities. Also, there was no observer effect on daily survival rates. Our study suggests that abandoned mining pits may be suitable alternative breeding habitats for Striped-tailed Yellow-finches since nest survival rates were similar to other studies in the central cerrado region.

  4. The striped skunk (Mephitis mephitis) is an intermediate host for Sarcocystis neurona.

    Science.gov (United States)

    Cheadle, M A; Yowell, C A; Sellon, D C; Hines, M; Ginn, P E; Marsh, A E; MacKay, R J; Dame, J B; Greiner, E C

    2001-06-01

    Striped skunks, initially negative for antibodies to Sarcocystis neurona, formed sarcocysts in skeletal muscles after inoculation with S. neurona sporocysts collected from a naturally infected Virginia opossum (Didelphis virginiana). Skunks developed antibodies to S. neurona by immunoblot and muscles containing sarcocysts were fed to laboratory-reared opossums which then shed sporulated Sarcocystis sporocysts in their faeces. Mean dimensions for sporocysts were 11.0 x 7.5 microm and each contained four sporozoites and a residuum. Sarcocysts from skunks and sporocysts from opossums fed infected skunk muscle were identified as S. neurona using PCR and DNA sequence analysis. A 2-month-old, S. neurona-naive pony foal was orally inoculated with 5 x 10(5) sporocysts. Commercial immunoblot for antibodies to S. neurona performed using CSF collected from the inoculated pony was low positive at 4 weeks p.i., positive at 6 weeks p.i., and strong positive at 8 weeks p.i. Gamma-interferon gene knockout mice inoculated with skunk/opossum derived sporocysts developed serum antibodies to S. neurona and clinical neurologic disease. Merozoites of S. neurona present in the lung, cerebrum, and cerebellum of mice were detected by immunohistochemistry using polyclonal antibodies to S. neurona. Based on the results of this study, the striped skunk is an intermediate host of S. neurona.

  5. Neutral and acidic milk oligosaccharides of the striped skunk (Mephitidae: Mephitis mephitis).

    Science.gov (United States)

    Taufik, Epi; Sekii, Nobuhiro; Senda, Akitsugu; Fukuda, Kenji; Saito, Tadao; Eisert, Regina; Oftedal, Olav T; Urashima, Tadasu

    2013-07-01

    The biological significance of the tremendous variation in proportions of oligosaccharides and lactose among mammalian milks is poorly understood. We investigated milk oligosaccharides of the striped skunk (Mephitis mephitis) and compared these results to other species of the clade Mustelida. Individual oligosaccharides were identified by proton nuclear magnetic resonance spectroscopy. In the striped skunk, six oligosaccharides were identified: isoglobotriose, 2'-fucosyllactose, A-tetrasaccharide, Galili pentasaccharide, 3'-sialyllactose and monosialyl monogalactosyl lacto-N-neohexaose. Four of these have been found in related Mustelida and the other two in more distantly related carnivorans. The neutral and acidic oligosaccharides derive from three core structures: lactose (Gal(β1-4)Glc), lacto-N-neotetraose (Gal(β1-4)GlcNAc(β1-3)Gal(β1-4)Glc) and lacto-N-neohexaose (Gal(β1-4)GlcNAc(β1-3)[Gal(β1-4)GlcNAc(β1-6)]Gal(β1-4)Glc). © 2013 Japanese Society of Animal Science.

  6. Emergent Ising degrees of freedom above a double-stripe magnetic ground state

    Science.gov (United States)

    Zhang, Guanghua; Flint, Rebecca

    2017-12-01

    Double-stripe magnetism [Q =(π /2 ,π /2 )] has been proposed as the magnetic ground state for both the iron-telluride and BaTi2Sb2O families of superconductors. Double-stripe order is captured within a J1-J2-J3 Heisenberg model in the regime J3≫J2≫J1 . Intriguingly, besides breaking spin-rotational symmetry, the ground-state manifold has three additional Ising degrees of freedom associated with bond ordering. Via their coupling to the lattice, they give rise to an orthorhombic distortion and to two nonuniform lattice distortions with wave vector (π ,π ) . Because the ground state is fourfold degenerate, modulo rotations in spin space, only two of these Ising bond order parameters are independent. Here, we introduce an effective field theory to treat all Ising order parameters, as well as magnetic order, and solve it within a large-N limit. All three transitions, corresponding to the condensations of two Ising bond order parameters and one magnetic order parameter are simultaneous and first order in three dimensions, but lower dimensionality, or equivalently weaker interlayer coupling, and weaker magnetoelastic coupling can split the three transitions, and in some cases allows for two separate Ising phase transitions above the magnetic one.

  7. Calibration of Binocular Vision Sensors Based on Unknown-Sized Elliptical Stripe Images

    Directory of Open Access Journals (Sweden)

    Zhen Liu

    2017-12-01

    Full Text Available Most of the existing calibration methods for binocular stereo vision sensor (BSVS depend on a high-accuracy target with feature points that are difficult and costly to manufacture and. In complex light conditions, optical filters are used for BSVS, but they affect imaging quality. Hence, the use of a high-accuracy target with certain-sized feature points for calibration is not feasible under such complex conditions. To solve these problems, a calibration method based on unknown-sized elliptical stripe images is proposed. With known intrinsic parameters, the proposed method adopts the elliptical stripes located on the parallel planes as a medium to calibrate BSVS online. In comparison with the common calibration methods, the proposed method avoids utilizing high-accuracy target with certain-sized feature points. Therefore, the proposed method is not only easy to implement but is a realistic method for the calibration of BSVS with optical filter. Changing the size of elliptical curves projected on the target solves the difficulty of applying the proposed method in different fields of view and distances. Simulative and physical experiments are conducted to validate the efficiency of the proposed method. When the field of view is approximately 400 mm × 300 mm, the proposed method can reach a calibration accuracy of 0.03 mm, which is comparable with that of Zhang’s method.

  8. Development of structural response diagram approach to evaluation of thermal stress caused by thermal striping

    Energy Technology Data Exchange (ETDEWEB)

    Kasahara, Naoto; Yacumpai, Apisara [Japan Nuclear Cycle Development Inst., Oarai, Ibaraki (Japan). Oarai Engineering Center; Takasho, Hideki

    1999-02-01

    At incomplete mixing area of high temperature and low temperature fluids near the surface of structures, temperature fluctuation of fluid gives thermal fatigue damage to wall structures. This thermohydraulic and thermomechanical coupled phenomenon is called thermal striping, which has so complex mechanism and sometimes causes crack initiation on the structural surfaces that rational evaluation methods are required for screening rules in design codes. In this study, frequency response characteristics of structures and its mechanism were investigated by both numerical and theoretical methods. Based on above investigation, a structural response diagram was derived, which can predict stress amplitude of structures from temperature amplitude and frequency of fluids. Furthermore, this diagram was generalized to be the Non-dimensional structural response diagram by introducing non-dimensional parameters such as Biot number, non-dimensional frequency, and non-dimensional stress. The use of the Non-dimensional structural response diagram appears to evaluate thermal stress caused by thermal striping, rapidly without structural analysis, and rationally with considering attenuation by non-stationary heat transfer and thermal unloading. This diagram can also give such useful information as sensitive frequency range to adjust coupled thermohydraulic and thermomechanical analysis models taking account of four kinds of attenuation factors: turbulent mixing, molecular diffusion, non-stationary heat transfer, and thermal unloading. (author)

  9. Stem and stripe rust resistance in wheat induced by gamma rays and thermal neutrons

    International Nuclear Information System (INIS)

    Skorda, E.A.

    1977-01-01

    Attempts were made to produce rust-resistant mutants in wheat cultivars. Seeds of G-38290 and G-58383 (T. aestivum), Methoni and Ilectra (T. durum) varieties were irradiated with different doses of γ-rays (3.5, 5, 8, 11, 15 and 21 krad) and thermal neutrons (1.7, 4, 5.5, 7.5, 10.5 and 12.5x10 12 ) and the M 1 plants were grown under isolation in the field. The objective was mainly to induce stripe, leaf and stem rust resistance in G-38290, Methoni and Ilectra varieties and leaf rust resistance in G-58383. Mutations for rust resistance were detected by using the ''chimera method'' under natural and artificial field epiphytotic conditions in M 2 and successive generations. The mutants detected were tested for resistance to a broad spectrum of available races. Mutants resistant or moderately resistant to stripe and stem rusts but not to leaf rust, were selected from G-38290. From the other three varieties tested no rust-resistant mutants were detected. The frequency of resistant mutants obtained increased with increased γ-ray dose-rate, but not with increased thermal neutron doses. Some mutants proved to be resistant or moderately resistant to both rusts and others to one of them. Twenty of these mutants were evaluated for yield from M 5 to M 8 . Some of them have reached the final stage of regional yield trials and one, induced by thermal neutrons, was released this year. (author)

  10. Implications of power plant mortality for management of the Hudson River striped bass fishery

    International Nuclear Information System (INIS)

    Goodyear, C.P.

    1988-01-01

    The Atlantic coastal stock of striped bass apparently declined from colonial times to the early 1930s and subsequently recovered. The reasons for the decline and recovery are not known, but fishing remains a possible explanation, which would suggest population sensitivity to increased mortality. Evidence suggests that fishing mortality has been increasing in recent years and will continue to increase in the absence of management intervention. The consequence of increased fishing mortality is an increase in the marginal effect of the power plant mortality which based on the utilities' models and parameter fits, could result in important reductions in the Hudson River striped bass population. Any management actions imposed to arrest population decline or to increase yield per effort in the fishery would be required to mitigate the impact of the power plants by reducing fishing mortality. It is estimated that a 20% conditional power plant mortality is equivalent to a 14% increase in the number of average fishermen using the stock. Consequently, should any management intervention be required on behalf of the population, managers would be required to reduce fishing mortality by about 14% just to account for the power plant mortality. 26 refs., 5 figs., 4 tabs

  11. Visualization analysis of tiger-striped flow mark generation phenomena in injection molding

    Science.gov (United States)

    Owada, Shigeru; Yokoi, Hidetoshi

    2016-03-01

    The generation mechanism of tiger-striped flow marks of polypropylene (PP)/rubber/talc blends in injection molding was investigated by dynamic visualization analysis in a glass-inserted mold. The analysis revealed that the behavior of the melt flow front correlates with the flow mark generation. The cloudy part in the tiger-striped flow marks corresponded to the low transcription rate area of the melt diverging near the cavity wall, while the glossy part corresponded to the high transcription rate area of the melt converging toward the cavity wall side. The melt temperature at the high transcription rate area was slightly lower than that at the low transcription rate area. These phenomena resulted due to the difference in the temperature of the melt front that was caused by the asymmetric fountain flow. These results suggest the followings; At the moment when the melt is broken near the one side of cavity wall due to piling the extensional strains up to a certain level, the melt spurts out near the broken side. It results in generating asymmetric fountain flow temporarily to relax the extensional front surface, which moves toward the opposite side to form the high transcription area.

  12. Nanoscale stripe arrays templated on Moiré patterns in graphite

    Science.gov (United States)

    McNally, Michael J.; Koç, Mumin Mehmet; Torricelli, Gauthier; von Haeften, Klaus

    2016-04-01

    Large areas of nanoscale stripe arrays were produced by drop casting silica nanoparticle solutions on highly oriented pyrolytic graphite surfaces at room temperature and imaged with atomic force microscopy. The alignment of the striped areas always reflected the threefold symmetry of the graphite surface. Two different patterns were observed, with different coverages, line separations and mutual orientation, being offset by 30°. Measurement of the relative angles and separations of the line patterns showed a very good match with an underlying Moiré pattern, resulting from the rotation of the top graphene layers. Closer-spaced lines were attributed to the zig-zag direction of the Moiré pattern whereas wider-spaced lines belonged to the armchair direction. The different abundance and apparent difference in long-term stability suggested that stability was governed by the number of reactive vertices per unit area as opposed to the number of vertices per line-length. Whilst sequential images recorded over several days revealed long term stability of all zig-zag arrays, attachment and detachment of single nanoparticles was observed. By contrast, arrays aligned in the armchair direction appeared and vanished collectively, suggesting condensation and evaporation of a fluid of nanoparticles floating on the surface.

  13. Arabidopsis thaliana Yellow Stripe1-Like4 and Yellow Stripe1-Like6 localize to internal cellular membranes and are involved in metal ion homeostasis.

    Directory of Open Access Journals (Sweden)

    Heng-Hsuan eChu

    2013-07-01

    Full Text Available Several members of the Yellow Stripe1-Like (YSL family of transporter proteins are able to transport metal-nicotianamine (NA complexes. Substantial progress has been made in understanding the roles of the Arabidopsis YSLs that are most closely related to the founding member of the family, ZmYS1 (e.g., AtYSL1, AtYSL2 and AtYSL3, but there is little information concerning members of the other two well-conserved YSL clades. Here, we provide evidence that AtYSL4 and AtYSL6, which are the only genes in Arabidopsis belong to YSL Group II, are localized to vacuole membranes and to internal membranes resembling endoplasmic reticulum. Both single and double mutants for YSL4 and YSL6 were rigorously analyzed, and have surprisingly mild phenotypes, in spite of the strong and wide-ranging expression of YSL6. However, in the presence of toxic levels of Mn and Ni, plants with mutations in YSL4 and YSL6 and plants overexpressing GFP-tagged YSL6 showed growth defects, indicating a role for these transporters in heavy metal stress responses.

  14. 75 FR 13720 - Endangered and Threatened Wildlife and Plants; 90-Day Finding on a Petition to List the Striped...

    Science.gov (United States)

    2010-03-23

    ... extinction of the striped newt population. In summary, we find that the information provided in the petition... Provided in the Petition The petitioners state that although many amphibians are declining worldwide due to... potential population extinction. In summary, we find that the information provided in the petition, as well...

  15. Dynamics of longitudinal and transverse modes along the junction plane in GaAlAs stripe lasers

    DEFF Research Database (Denmark)

    Mengel, F; Ostoich, V

    1977-01-01

    Observations of the transient excitation of higher order transverse modes along the junction plane in DH GaAlAs stripe lasers during subnanosecond pulse modulation is reported. These modes are strongly excited at the onset of the light pulse, they decay during 200 ps, and reappear after 400-600 ps...

  16. Effect of ingredient particle sizes and dietary viscosity on digestion and faecal waste of striped catfish (Pangasianodon hypophthalmus)

    NARCIS (Netherlands)

    Tran, Tu; Hien, T.T.T.; Bosma, R.H.; Heinsbroek, L.T.N.; Verreth, J.A.J.; Schrama, J.W.

    2017-01-01

    The ingredients' particle size and dietary viscosity may alter digestion, performance and faecal waste management of fish. This study aimed to assess the effect of grinding screen sizes of feed ingredients and dietary viscosity on digestibility, faecal waste and performance of striped catfish

  17. Sloan Digital Sky Survey Standard Star Catalog for Stripe 82: The Dawn of Industrial 1% Optical Photometry

    National Research Council Canada - National Science Library

    Ivezic, Zeljko; Smith, J. A; Miknaitis, Gajus; Lin, Huan; Tucker, Douglas; Lupton, Robert H; Gunn, James E; Knapp, Gillian R; Strauss, Michael A; Sesar, Branimir

    2007-01-01

    ... (at least four per band, with a median of 10) in the ugriz system. The catalog includes 1.01 million nonvariable unresolved objects from the equatorial stripe 82 in the right ascension range and with the corresponding r-band...

  18. A record of Striped Hog-nosed Skunk Conepatus semistriatus in central Panama, between two known sub-ranges

    NARCIS (Netherlands)

    Esser, H.J.; Liefting, Y.; Kays, R.; Jansen, P.A.

    2012-01-01

    Striped Hog-nosed Skunk Conepatus semistriatus was camera-trapped in central Panama. The photographs, taken in a densely forested area, probably belong to a single, wandering, individual. These photographs represent the easternmost record of C. semistriatus in Central America and confirm an earlier,

  19. Differences in the response of a striped dolphin (Stenella coeruleoalba) and a harbour porpoise (Phocoena phocoena) to an acoustic alarm

    NARCIS (Netherlands)

    Kastelein, R.A.; Jennings, N.; Verboom, W.C.; Haan, D.de; Schooneman, N.M.

    2006-01-01

    Small cetacean bycatch in gillnet fisheries may be reduced by deterring odontocetes from nets acoustically. However, different odontocete species may respond differently to acoustic signals from alarms. Therefore, in this study a striped dolphin and a harbour porpoise were subjected simultaneously

  20. Differences in the response of a striped dolphin (Stenella coeruleoalba) and a harbour popoise (Phocoena phocoena) to an acoustic alarm

    NARCIS (Netherlands)

    Kastelein, R.A.; Jennings, N.; Verboom, W.C.; Haan, de D.; Schooneman, N.M.

    2006-01-01

    Small cetacean bycatch in gillnet fisheries may be reduced by deterring odontocetes from nets acoustically. However, different odontocete species may respond differently to acoustic signals from alarms. Therefore, in this study a striped dolphin and a harbour porpoise were subjected simultaneously

  1. Computer simulation model for the striped bass young-of-the-year population in the Hudson River

    International Nuclear Information System (INIS)

    Eraslan, A.H.; Van Winkle, W.; Sharp, R.D.; Christensen, S.W.; Goodyear, C.P.; Rush, R.M.; Fulkerson, W.

    1975-09-01

    This report presents a daily transient (tidal-averaged), longitudinally one-dimensional (cross-section-averaged) computer simulation model for the assessment of the entrainment and impingement impacts of power plant operations on young-of-the-year populations of the striped bass, Morone saxatilis, in the Hudson River

  2. Interactions with the actin cytoskeleton are required for cell wall localization of barley stripe mosaic virus TGB proteins

    Science.gov (United States)

    The host cytoskeleton and membrane system are the main routes by which plant viruses move within or between cells. Barley stripe mosaic virus (BSMV) -induced actin filament thickening was visualized in the cytoskeleton of agroinfiltrated Nicotiana benthamiana epidermal cells expressing DsRed:Talin. ...

  3. Bipartite stripe-like order of magneto-crystalline structure in Fe-based superconductors

    Energy Technology Data Exchange (ETDEWEB)

    Yazdani, A., E-mail: Yazdania@modares.ac.ir; Hesani, M.

    2017-01-01

    Emergence of superconductivity in the iron-based superconductor of “LaFeAsO” is a consequence of the characteristic behavior of antiferromagnetic structure at different triplet critical points. Here, we studied x{sub 2}{sup c} (highest concentration bound) = 0.5. A new second antiferromagnetic (AFM) structure was found that is developed for three different geometrical arrangements of O/H, resulting in three different antiferromagnetic structures at x{sub 2}{sup c} = 0.5. Both crystal and magnetic orderings are a consequence of the stripe-like ordering in the stripe configuration of “H” and “O”. Moreover, in our calculation a strong correlation was obtained between the magnetic and geometrical structures, resulting in the non-uniform magnetic moments of ∼1.30 μβ (AFM1-1) and ∼1.66 μβ (AFM1-3). This phenomenon results in the Jahn-Teller distortion, reflected in the non-uniformity of spin-induced distribution, in the range of 1.07 μβ close to “H” and 1.53 μβ close to “O”, in order to stabilize the ground state of the magneto-crystalline structure. This newly found second antiferromagnetic ordering behaves as the ground state with a lower cohesive energy, resulting in a lower magnetic moment. The effects are more pronounced in the displacement of atomic positions, reflecting in the repulsion of intra-layer La atoms from each other and the attraction of inter-layer Fe atoms toward each other, in direction to induce the anisotropy variable of η ≈ 0.78. - Highlights: • A new second antiferromagnetic structure was found. • Both crystal and magnetic orderings are a consequence of stripe-like ordering. • A strong correlation between the magnetic and geometrical structures was obtained. • Decrease of asymmetrical magnetic moment in direction to the decreased energy. • The effects are more pronounced on the displacement of topological atomic position.

  4. Appraisal of wheat germplasm for adult plant resistance against stripe rust

    Directory of Open Access Journals (Sweden)

    Saleem Kamran

    2015-12-01

    Full Text Available The resurgence of wheat stripe rust is of great concern for world food security. Owing to resistance breakdown and the appearance of new virulent high-temperature adapted races of Puccinia striiformis f. sp. tritici (Pst, many high yielding commercial varieties in the country lost their yield potential. Searching for new sources of resistance is the best approach to mitigate the problem. Quantitative resistance (partial or adult plant or durable resistance is reported to be more stable than race specific resistance. In the current perusal, a repertoire of 57 promising wheat lines along with the KLcheck line Morocco, developed through hybridisation and selection of local and international lines with International Maize and Wheat Improvement Center (CIMMYT origin, were evaluated under natural field conditions at Nuclear Institute for Agriculture and Biology (NIAB during the 2012−2013 and 2013−2014 time periods. Final rust severity (FRS, the area under the rust progress curve (AURPC, the relative area under the rust progress curve (rAURPC, and the coefficient of infection (CI were unraveled to infer the level of quantitative resistance. Final rust severity was recorded when the susceptible check exhibited 100% severity. There were 21 lines which were immune (no disease, 16 which were resistant, five moderately resistant, two resistant-to-moderately resistant, one moderately resistant-to-moderately susceptible, 5 moderately susceptible-to-susceptible, one moderately susceptible, and six exhibited a susceptible response. Nevertheless, 51 lines exhibited a high level of partial resistance while the three lines, NW-5-1212-1, NW-7-30-1, and NW-7-5 all showed a moderate level of partial resistance based on FRS, while 54 lines, on the basis of AURPC and rAURPC, were identified as conferring a high level of partial resistance. Moreover, adult plant resistance was conferred by 47 wheat lines, based on CI value. It was striking that, 13 immune lines

  5. THE 31 DEG{sup 2} RELEASE OF THE STRIPE 82 X-RAY SURVEY: THE POINT SOURCE CATALOG

    Energy Technology Data Exchange (ETDEWEB)

    LaMassa, Stephanie M.; Urry, C. Megan; Ananna, Tonima; Civano, Francesca; Marchesi, Stefano; Pecoraro, Robert [Yale Center for Astronomy and Astrophysics, Physics Department, P.O. Box 208120, New Haven, CT 06520 (United States); Cappelluti, Nico; Comastri, Andrea; Brusa, Marcella [INAF-Osservatorio Astronomico di Bologna, via Ranzani 1, I-40127 Bologna (Italy); Böhringer, Hans; Chon, Gayoung [Max-Planck-Institut für extraterrestrische Physik, D-85748 Garching (Germany); Glikman, Eilat [Department of Physics, Middlebury College, Middlebury, VT 05753 (United States); Richards, Gordon [Department of Physics, Drexel University, 3141 Chestnut Street, Philadelphia, PA 19104 (United States); Cardamone, Carie [Department of Math and Science, Wheelock College, 200 Riverway, Boston, MA 02215 (United States); Farrah, Duncan [Department of Physics MC 0435, Virginia Polytechnic Institute and State University, 850 West Campus Drive, Blacksburg, VA 24061 (United States); Gilfanov, Marat [Max-Planck Institut für Astrophysik, Karl-Schwarzschild-Str. 1, Postfach 1317, D-85741 Garching (Germany); Green, Paul [Smithsonian Astrophysical Observatory, 60 Garden Street, Cambridge, MA 02138 (United States); Komossa, S. [Max-Planck-Institut für Radioastronomie, Auf dem Hügel 69, D-53121 Bonn (Germany); Lira, Paulina [Departamento de Astronomia, Universidad de Chile, Camino del Observatorio 1515, Santiago (Chile); Makler, Martin [Centro Brasileiro de Pesquisas Fisicas, Rua Dr Xavier Sigaud 150, Rio de Janeiro, RJ 22290-180 (Brazil); and others

    2016-02-01

    We release the next installment of the Stripe 82 X-ray survey point-source catalog, which currently covers 31.3 deg{sup 2} of the Sloan Digital Sky Survey (SDSS) Stripe 82 Legacy field. In total, 6181 unique X-ray sources are significantly detected with XMM-Newton (>5σ) and Chandra (>4.5σ). This catalog release includes data from XMM-Newton cycle AO 13, which approximately doubled the Stripe 82X survey area. The flux limits of the Stripe 82X survey are 8.7 × 10{sup −16} erg s{sup −1} cm{sup −2}, 4.7 × 10{sup −15} erg s{sup −1} cm{sup −2}, and 2.1 × 10{sup −15} erg s{sup −1} cm{sup −2} in the soft (0.5–2 keV), hard (2–10 keV), and full bands (0.5–10 keV), respectively, with approximate half-area survey flux limits of 5.4 × 10{sup −15} erg s{sup −1} cm{sup −2}, 2.9 × 10{sup −14} erg s{sup −1} cm{sup −2}, and 1.7 × 10{sup −14} erg s{sup −1} cm{sup −2}. We matched the X-ray source lists to available multi-wavelength catalogs, including updated matches to the previous release of the Stripe 82X survey; 88% of the sample is matched to a multi-wavelength counterpart. Due to the wide area of Stripe 82X and rich ancillary multi-wavelength data, including coadded SDSS photometry, mid-infrared WISE coverage, near-infrared coverage from UKIDSS and VISTA Hemisphere Survey, ultraviolet coverage from GALEX, radio coverage from FIRST, and far-infrared coverage from Herschel, as well as existing ∼30% optical spectroscopic completeness, we are beginning to uncover rare objects, such as obscured high-luminosity active galactic nuclei at high-redshift. The Stripe 82X point source catalog is a valuable data set for constraining how this population grows and evolves, as well as for studying how they interact with the galaxies in which they live.

  6. Reproductive biology of black seabream Acanthopagrus schlegelii, threadfin porgy Evynnis cardinalis and red pargo Pagrus major in the northern South China Sea with consideration of fishery status and management needs.

    Science.gov (United States)

    Law, C S W; Sadovy de Mitcheson, Y

    2017-07-01

    The reproductive biology of three commercially significant seabream species (family: Sparidae) Acanthopagrus schlegelii, Evynnis cardinalis and Pagrus major, taken from Hong Kong and adjacent northern South China Sea (SCS) waters, were investigated for their sexual patterns, spawning seasons, length at maturity and exploitation in relation to their conservation and management status. Histological analysis showed E. cardinalis and P. major to be functionally gonochoristic, the latter having a bisexual juvenile stage and being a rudimentary hermaphrodite. Acanthopagrus schlegelii is a protandric hermaphrodite. Standard length (L S ) at 50% sex change for A. schlegelii is 291 mm. L S at 50% female maturity for E. cardinalis and P. major are 117 and 332 mm, respectively. For all three species, the spawning period falls between November and March. The study highlights geographical differences in reproductive biology among the species and a paucity of fishery or other population-related data. While heavy fishing pressure, life-history characteristics and absence of effective management throughout the geographic ranges of these species make them susceptible to overfishing, they nonetheless appear to be generally more resilient than many other taxa that comprise the multi-species fisheries of the region, possibly due to their relatively rapid sexual maturation and spatial movement patterns. Overall, however, little is known of the biology, fishing history and current fishery status of sparids in general in the northern SCS and the current study is one of the first to examine such aspects of this family in the region and to consider appropriate management options. © 2017 The Fisheries Society of the British Isles.

  7. Endocrinology of sociality: comparisons between sociable and solitary individuals within the same population of African striped mice.

    Science.gov (United States)

    Schoepf, Ivana; Schradin, Carsten

    2013-06-01

    The social organization of species ranges from solitary-living to complex social groups. While the evolutionary reasons of group-living are well studied, the physiological mechanisms underlying alternative social systems are poorly understood. By studying group-living and solitary individuals of the same species, we can determine hormonal correlates of sociality without the problem of confounding phylogenetic factors. The African striped mouse (Rhabdomys pumilio) is a socially flexible species, which can be solitary or alternatively form complex family groups, depending on population density and the extent of reproductive competition. We predicted group-living striped mice to show signs of reproductive suppression and social stress, resulting in higher corticosterone but lower testosterone levels when compared to solitary-living individuals. To determine whether differences in social organization correlated with hormonal differences, we collected blood samples from free-living striped mice during four breeding seasons when we experimentally induced solitary-living in philopatric individuals by locally reducing population density. Striped mice that were group-living did not change their corticosterone or estosterone levels during the study, indicating that there was no temporal effect during the breeding season. Striped mice of both sexes had significantly lower corticosterone levels after switching from group- to solitary-living. Solitary males - but not solitary females - had higher testosterone levels than group-living conspecifics. Our results suggest that group-living results in physiological stress and can induce reproductive suppression, at least in philopatric males. The switch to solitary-living may thus be a tactic to avoid reproductive competition within groups, and is associated with decreased stress hormone levels and onset of independent reproduction. Copyright © 2013 Elsevier Inc. All rights reserved.

  8. Insecticide pyrethroids in liver of striped dolphin from the Mediterranean Sea.

    Science.gov (United States)

    Aznar-Alemany, Òscar; Giménez, Joan; de Stephanis, Renaud; Eljarrat, Ethel; Barceló, Damià

    2017-06-01

    Pyrethroid pesticides were analysed in liver of striped dolphin (Stenella coeruleoalba) from the Alboran Sea (south of Spain, Mediterranean Sea). The occurrence and bioaccumulation of pyrethroid insecticides in marine mammal tissues from the northern hemisphere had never been determined before. Pyrethroids were detected in 87% of the specimens with a mean total concentration of 300 ng g -1 lw ± 932 (range 2.7-5200 ng g -1 lw). Permethrin and tetramethrin were the main contributors to the pyrethroid profiles, with enantiospecific accumulation for the first and isomer specific accumulation for the latter. Bioaccumulation of pyrethroids was unlike that of persistent organic pollutants (POPs), as pyrethroid concentrations were not correlated to the maturity stage of the specimens. Concentrations slightly increased from calves to juveniles, whereas juveniles presented similar concentrations to adults. Metabolization of pyrethroids after achieving sexual maturity might account for this pattern. Copyright © 2017 Elsevier Ltd. All rights reserved.

  9. Ladies in stripes: taxonomic confusion in a potential mimicry complex among Wallacean Coccinellidae (Coleoptera: Coccinellidae).

    Science.gov (United States)

    Li, Jiahui; Tomaszewska, Wioletta; Pang, Hong; Ślipiński, Adam

    2014-12-24

    Two species of ladybird beetles, one belonging to Phrynocaria Timberlake (Coccinellni) and the second to Chilocorus Leach (Chilocorini) collected by R.A. Wallace in the Maluku Islands (Indonesia) have identical body size and colour pattern with longitudinal stripes on elytra. Their external features were so similar that G.R. Crotch included both of them in the type series of Chilocorus wallacii Crotch, 1874. The specimen designated as the lectotype of Chilocorus wallacii belongs to Phrynocaria. Coelophora wallacii Crotch, 1874 is also transferred to Phrynocaria (new comb.) and becomes senior homonym and Phrynocaria crotchi new name is proposed for the secondary junior homonym. Chilocorus crotchi sp. nov. is described for the taxon misidentified as Chilocorus wallacii Crotch.

  10. Kinematics and energetic benefits of schooling in the labriform fish, striped surfperch Embiotoca lateralis

    DEFF Research Database (Denmark)

    Johansen, J. L.; Vaknin, R.; Steffensen, John Fleng

    2010-01-01

    Schooling can provide fish with a number of behavioural and ecological advantages, including increased food supply and reduced predator risk. Previous work suggests that fish swimming using body and caudal fin locomotion may also experience energetic advantages when trailing behind neighbours....... However, little is known about the potential energetic advantages associated with schooling in fish that swim using their pectoral fins. Using the striped surfperch Embiotoca lateralis, a labriform fish that swims routinely with its pectoral fins, we found that pectoral fin beat frequencies were...... significantly higher for schooling individuals swimming in the front of a school relative to those swimming in the back, with trailing individuals benefiting from a 14.9 +/- 3.2% reduction in fin beat frequency (mean +/- SE). Trailing fish were estimated to benefit from a 25.6% reduction in oxygen consumption...

  11. Transmission Biology of Rice Stripe Mosaic Virus by an Efficient Insect Vector Recilia dorsalis (Hemiptera: Cicadellidae

    Directory of Open Access Journals (Sweden)

    Xin Yang

    2017-12-01

    Full Text Available Rice stripe mosaic virus (RSMV is a newly discovered species of cytorhabdovirus infecting rice plants that is transmitted by the leafhopper Recilia dorsalis. In this study, the transmission characteristics of RSMV by R. dorsalis were investigated. Under suitable growth conditions for R. dorsalis, the RSMV acquisition rate reached 71.9% in the second-generation population raised on RSMV-infected rice plants. The minimum acquisition and inoculation access periods of R. dorsalis were 3 and 30 min, respectively. The minimum and maximum latent transmission periods of RSMV in R. dorsalis were 6 and 18 d, respectively, and some R. dorsalis intermittently transmitted RSMV at 2–6 d intervals. Our findings revealed that the virus can replicate in the leafhopper body, but is likely not transovarially transmitted to offspring. These transmission characteristics will help guide the formulation of RSMV prevention and control strategies.

  12. A Piston-Rotaxane with Two Potential Stripes: Force Transitions and Yield Stresses

    Directory of Open Access Journals (Sweden)

    Edith M. Sevick

    2013-10-01

    Full Text Available We examine a rod piston-rotaxane system, where the positions of several mobile rings on the axle are controlled by an external force acting on one of the rings. This allows us to access the translational entropy of the rings. For a simple rotaxane molecule with an axle that has uniform ring-axle interactions along its length, the molecule behaves like a miniature piston filled with a one-dimensional ideal gas. We then examine the effect of two stripes on the axle, having different ring-axle interactions with the mobile rings, so that one section is of high energy (repulsive for the rings and another section is of lower energy (or attractive. This kind of rotaxane can exhibit rapid changes in displacement or force, and in particular, this molecule can exhibit a yield stress in which the piston suddenly compresses under a small increase in the applied force.

  13. Complete mitochondrial genome of the striped scat Selenotoca multifasciata (Perciformes: Scatophagidae).

    Science.gov (United States)

    Liu, Zhenhao; Mu, Xingjiang; Li, Hong; Gui, Lang; Zeng, Wengang; Zhang, Junbin

    2016-07-01

    The striped scat Selenotoca multifasciata is an ornamental and commercial fish in Asia. In the present study, we sequenced and annotated the complete mitochondrial genome of Selenotoca multifasciata. Its total length is 16,646 bp, and the mitochondrial genome is composed of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a non-coding control region. ND6 and eight tRNA genes were encoded on the light strand, whereas the remaining genes located on the heavy strand (H-strand). All the 16 mitochondrial genomes of the suborder Acanthuroidei available in GenBank were employed for phylogenetic analysis, and the result showed a close relationship between Selenotoca multifasciata and Scatophagus argus. This mitochondrial information may benefit relative ecological and phylogenetic studies.

  14. IGF-I and branchial IGF receptor expression and localization during salinity acclimation in striped bass

    DEFF Research Database (Denmark)

    Tipsmark, Christian Kølbaek; Luckenbach, John Adam; Madsen, Steffen

    2007-01-01

    The initial response of the IGF-I system and the expression and cellular localization of IGF type-I receptor (IGF-IR) were studied in the gill of a euryhaline teleost during salinity acclimation. Exposure of striped bass (Morone saxatilis) to hyperosmotic and hypoosmotic challenges induced small......, transitory (liver IGF-I mRNA levels after SW transfer, suggesting that decreased plasma levels...... in either plasma IGF-I, liver, or gill IGF-I mRNA, or gill IGF-IR mRNA levels. In a separate experiment, FW-acclimated fish were injected with saline or IGF-I prior to a 24-h SW challenge. Rapid regain of osmotic balance following SW transfer was hindered by IGF-I. Immunohistochemistry revealed...

  15. Safety studies of the oral rabies vaccine SAD B19 in striped skunk (Mephitis mephitis).

    Science.gov (United States)

    Vos, A; Pommerening, E; Neubert, L; Kachel, S; Neubert, A

    2002-04-01

    Safety of the modified live rabies virus vaccine, SAD B19, was studied in striped skunks (Mephitis mephitis). Seven skunks received 10(7.9) foci formatting units by direct oral administration. In four cages, a vaccinated animal was placed with a control animal, the other three vaccinated skunks were housed individually. Saliva and nasal swabs were collected 1, 2, 4, 24, 48, and 72 hr post-vaccination. From all vaccinated and control animals (n = 11) blood samples were collected 0, 28, 56, 84, and 296 days post-vaccination. Three of seven vaccinated skunks seroconverted. None of the control animals had detectable levels of rabies virus neutralizing antibodies. Also no vaccine virus was isolated from the nasal and saliva swabs collected from any animal. Thus, SAD B19 was innocuous for skunks in our study after direct oral administration at field concentration.

  16. Graphically characterizing the movement of a rabid striped skunk epizootic across the landscape in northwestern Wyoming.

    Science.gov (United States)

    Ramey, Craig A; Mills, Kenneth W; Fischer, Justin W; McLean, Robert G; Fagerstone, Kathleen A; Engeman, Richard M

    2013-09-01

    A striped skunk (Mephitis mephitis) rabies epizootic in northwestern Wyoming was studied from the Index Case in 1988 to the last case in 1993, and possibly is the first rabies epizootic in a previously rabies-free zone monitored from beginning to end. The 843 km(2) study area comprised skunk habitat along 90 km of Shoshone River's floodplain from Bighorn Lake upstream to Cody. Of 1,015 skunks tested, 215 were rabies-positive. Integrating spatial and temporal data from positive cases, we analyzed the epizootic's movements and dynamics at 6-month intervals using multivariate movement maps, a new multivariate descriptive methodology presented here to demonstrate the epizootic's directional flow, while illustrating areas with higher case densities (i.e., wave crests). This approach should help epidemiologists and public health officials to better understand future rabies epizootics.

  17. The complete mitochondrial genome of the critically endangered Vietnamese three-striped box turtle (Testudines: Geoemydidae).

    Science.gov (United States)

    Li, Wei; Zhao, Jian; Shi, Yan; Xiao, Feng-Fang; Zhang, Xin-Cheng; Zhu, Xin-Ping

    2015-01-01

    The complete mitochondrial genome of the Vietnamese three-striped box turtle (Cuora cyclornata) was first determined in this study. It was a circular molecule of 16,594 bp in length, consisting of 37 genes typically found in other vertebrates. The AT content of the overall base composition of the whole mitogenome was 60.39%, while the control region was 70.23%. Two ETAS and 4 CSBs were identified, while a remarkable feature was found in the control region: a large number of (TTATTATA)10 direct tandem repeats followed by (TTATA)n (n=10, 8 and 1), which were spaced into three domains by (TA)n (n=1, 1 and 2). The sequence information could play an important role in the study of phylogenetic relationships in turtles and preservation of genetic resources for helping conservation of the endangered species.

  18. Simple and Rapid Detection for Rice stripe virus Using RT-PCR and Porous Ceramic Cubes

    Directory of Open Access Journals (Sweden)

    Su-Bin Hong

    2015-12-01

    Full Text Available A rapid and simple RT-PCR diagnosis method for detection of Rice stripe virus (RSV, one of major virus infecting rice, was developed using porous ceramic cubes in this study. The porous ceramic cube can rapidly absorb biological molecules such as small-sized proteins and nucleic acid fragments into its pores. We examined whether this ability of porous ceramic cubes could be applied for isolating viral nucleic acids or particles from the RSV- infected plant tissues. In this study, we found that the porous ceramic cube was capable of absorbing a detection level of viruses from the rice tissues infected with RSV and established RT-PCR-based RNA diagnosis method using porous ceramic cubes.

  19. Gait transition and oxygen consumption in swimming striped surfperch Embiotoca lateralis Agassiz

    DEFF Research Database (Denmark)

    Cannas, M.; Schaefer, J.; Domenici, P.

    2006-01-01

    A flow-through respirometer and swim tunnel was used to estimate the gait transition speed (Up-c) of striped surfperch Embiotoca lateralis, a labriform swimmer, and to investigate metabolic costs associated with gait transition. The Up-c was defined as the lowest speed at which fish decrease...... the use of pectoral fins significantly. While the tail was first recruited for manoeuvring at relatively low swimming speeds, the use of the tail at these low speeds [as low as 0·75 body (fork) lengths s-1, LF s-1) was rare (..., either in addition to pectoral fins or during burst-and-coast mode. Oxygen consumption increased exponentially with swimming speeds up to gait transition, and then levelled off. Similarly, cost of transport (CT) decreased with increasing speed, and then levelled off near Up-c. When speeds =Up...

  20. Magnetic stripe domains of [Pt/Co/Cu]10 multilayer near spin reorientation transition

    Directory of Open Access Journals (Sweden)

    L. Sun

    2016-05-01

    Full Text Available The dependence of magnetic anisotropy, magnetic domain patterns and magnetization reversal processes in [Pt/Co(tCo/Cu]10 film stack epitaxied on Cu (111 substrate have been studied as a function of the Co layer thickness tCo, by magneto-optic polar Kerr magnetometry and microscopy. We find the film undergoes spin reorientation transition from out-of-plane to in-plane as tCo increases. The SRT thickness is verified by Rotating-field Magneto-Optic Kerr effect method. The film exhibits the stripe domain structures at remanence with the width decreasing while tCo approaches SRT. As demonstrated by the first order reversal curve measurement, the magnetization reversal process encompasses irreversible domain nucleation, domain annihilation at large field and reversible domain switching near remanence.

  1. Nocardia seriolae infection in the three striped tigerfish, Terapon jarbua (Forsskål).

    Science.gov (United States)

    Wang, P-C; Chen, S-D; Tsai, M-A; Weng, Y-J; Chu, S-Y; Chern, R-S; Chen, S-C

    2009-04-01

    An epizootic in pond cultured three striped tigerfish, Terapon jarbua, in Taiwan was caused by Nocardia seriolae. Diseased fish first showed clinical signs and mortalities in February and March 2003. The cumulative mortality within 2 months was 2.4% (1200 of 50 000) and affected fish were 7 months old with total lengths from 18 to 25 cm. Most affected fish were pale and lethargic with haemorrhages and ulcers on the skin. The most significant gross pathological changes were varying degrees of ascites and enlargement of the spleen, kidney and liver. Obvious white nodules, varying in size, were found in these organs. Bacteria were either coccal or filamentous in appearance, with bead-like forms. Isolates from diseased fish were characterized using the API ZYM (Analytical profile index; Bio Mérieux, France) systems and conventional tests and identified as Nocardia sp. The isolate was designated NS127 and was confirmed as N. seriolae by a polymerase chain reaction assay that gave the expected specific 432 bp amplicon. In addition, its 16S rDNA sequence gave 100% sequence identity with N. seriolae. A partial sequence of the 16S rRNA gene, heat shock protein gene and RNA polymerase gene (rpo B) of NS127 and the type strain of N. seriolae BCRC 13745 formed a monophyletic clade with a high sequence similarity and bootstrap value of 99.9%. White nodules induced in experimental fish were similar to naturally infected cases and N. seriolae was re-isolated on brain heart infusion agar. This is the first report of N. seriolae-infection in three striped tigerfish in aquaculture.

  2. Effect of zinc sulphate on gelling properties of phosphorylated protein isolate from yellow stripe trevally.

    Science.gov (United States)

    Arfat, Yasir Ali; Benjakul, Soottawat

    2013-12-01

    Impacts of zinc sulphate (ZnSO4) (0-140 μmol/kg) on gel properties of yellow stripe trevally surimi added with sodium tripolyphosphate (STPP) (0.25% and 0.5%, w/w) and protein isolate phosphorylated with STPP at 0.25% and 0.5% (w/w) were studied. Gels from surimi added with 60 μmol ZnSO4/kg in the absence and presence of 0.5% STPP had the increases in breaking force and deformation by 20.9% and 33.3%, and 11.6% and 18.6%, respectively, compared with the control surimi gel (without additives). Gel of protein isolate phosphorylated with 0.5% STPP containing 100 μmol ZnSO4/kg had the increases in breaking force and deformation by 14.87% and 5.6%, respectively, compared with the gel from non-phosphorylated protein isolate at the same ZnSO4 level, suggesting that the phosphorylated protein isolate was more crosslinked by Zn(2+). The addition of ZnSO4 at the suitable level lowered the expressible moisture content, but increased whiteness of surimi or protein isolate gels (Pisolate added with ZnSO4, regardless of phosphates incorporated. Microstructure study revealed that a gel having highly interconnected and denser network with smaller voids was formed when protein isolate phosphorylated with 0.5% STPP was added with ZnSO4 at a level of 100 μmol/kg. Thus, gel with improved properties could be obtained from protein isolate from yellow stripe trevally phosphorylated with STPP in conjunction with addition of ZnSO4 at an appropriate level. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. Effect of the tiger stripes on the tidal deformation of Enceladus

    Science.gov (United States)

    Soucek, Ondrej; Hron, Jaroslav; Behounkova, Marie; Cadek, Ondrej

    2016-10-01

    The south polar region of Saturn's moon Enceladus has been subjected to a thorough scientific scrutiny since the Cassini mission discovery of an enigmatic system of fractures informally known as "tiger stripes". This fault system is possibly connected to the internal water ocean and exhibits a striking geological activity manifesting itself in the form of active water geysers on the moon's surface.The effect of the faults on periodic tidal deformation of the moon has so far been neglected because of the difficulties associated with the implementation of fractures in continuum mechanics models. Employing an open source finite element FEniCS package, we provide a numerical estimate of the maximum possible impact of the tiger stripes on the tidal deformation and the heat production in Enceladus's ice shell by representing the faults as narrow zones with negligible frictional and bulk resistance passing vertically through the whole shell.For a uniform ice shell thickness of 25 km, consistent with the recent estimate of libration, and for linear elastic rheology, we demonstrate that the faults can dramatically change the distribution of stress and strain in Enceladus's south polar region, leading to a significant increase of the heat flux and to a complex deformation pattern in this area. We also present preliminary results studying the effects of (i) variable ice-shell thickness, based on the recent topography, gravity and libration inversion model by Čadek et al. (2016) and (ii) Maxwell viscoelastic rheology on the global tidal deformation of the ice shell.O.S. acknowledges support by the Grant Agency of the Czech Republic through the project 15-14263Y.

  4. Tidal-Induced Internal Ocean Waves as an Explanation for Enceladus' Tiger Stripe Pattern and Hotspot Activity

    Science.gov (United States)

    Vermeersen, B. L. A.; Maas, L. R.; van Oers, S.; Rabitti, A.; Jara-Orue, H.

    2014-12-01

    One of the most peculiar features on Saturn moon Enceladus is its so-called tiger stripe pattern at the geologically active South Polar Terrain (SPT), as first observed in detail by the Cassini spacecraft early 2005. It is generally assumed that the four almost parallel surface lines that constitute this pattern are faults in the icy surface overlying a confined salty water reservoir. Indeed, later Cassini observations have shown that salty water jets originate from the tiger stripes [e.g., Hansen et al., Science, 311, 1422-1425, 2006; Postberg et al., Nature, 474, 620-622, 2011]. More recently, Porco et al. [Astron. J., 148:45, Sep. 2014] and Nimmo et al. [Astron. J., 148:46, Sep. 2014] have reported strong evidence that the geysers are not caused by frictional heating at the surface, but that geysers must originate deeper in Enceladus' interior. Tidal flexing models, like those of Hurford et al., Nature, 447, 292-294, 2007, give a good match for the brightness variations Cassini observes, but they seem to fail to reproduce the exact timing of plume brightening. Although jet activity is thus strongly connected to tidal forcing, another mechanism must be involved as well. Last year, we formulated the original idea [Vermeersen et al., AGU Fall Meeting 2013, abstract #P53B-1848] that the tiger stripe pattern is formed and maintained by induced, tidally and rotationally driven, wave-attractor motions in the ocean underneath the icy surface of the tiger-stripe region. Such wave-attractor motions are observed in water tank experiments in laboratories on Earth and in numerical experiments [Maas et al., Nature, 338, 557-561, 1997; Drijfhout and Maas, J. Phys. Oceanogr., 37, 2740-2763, 2007; Hazewinkel et al., Phys. Fluids, 22, 107102, 2010]. The latest observations by Porco et al. and Nimmo et al. seem to be in agreement with this tidal-induced wave attractor phenomenon, both with respect to tiger stripe pattern and with respect to timing of hotspot activity. However, in

  5. Expansion of the South China Sea basin: Constraints from magnetic anomaly stripes, sea floor topography, satellite gravity and submarine geothermics

    Directory of Open Access Journals (Sweden)

    Xuezhong Yu

    2017-01-01

    Full Text Available The widely distributed E–W-trending magnetic anomaly stripes in the central basin and the N–E-trending magnetic anomaly stripes in the southwest sub-basin provide the most important evidence for Neogene expansion of the South China Sea. The expansion mechanism remains, however, controversial because of the lack of direct drilling data, non-systematic marine magnetic survey data, and irregular magnetic anomaly stripes with two obvious directions. For example, researchers have inferred different ages and episodes of expansion for the central basin and southwest sub-basin. Major controversy centers on the order of basinal expansion and the mechanism of expansion for the entire South China Sea basin. This study attempts to constrain these problems from a comprehensive analysis of the seafloor topography, magnetic anomaly stripes, regional aeromagnetic data, satellite gravity, and submarine geothermics. The mapped seafloor terrain shows that the central basin is a north-south rectangle that is relatively shallow with many seamounts, whereas the southwest sub-basin is wide in northeast, gradually narrows to the southwest, and is relatively deeper with fewer seamounts. Many magnetic anomaly stripes are present in the central basin with variable dimensions and directions that are dominantly EW-trending, followed by the NE-, NW- and NS-trending. Conversely such stripes are few in the southwest sub-basin and mainly NE-trending. Regional magnetic data suggest that the NW-trending Ailaoshan-Red River fault extends into the South China Sea, links with the central fault zone in the South China Sea, which extends further southward to Reed Tablemount. Satellite gravity data show that both the central basin and southwest sub-basin are composed of oceanic crust. The Changlong seamount is particularly visible in the southwest sub-basin and extends eastward to the Zhenbei seamount. Also a low gravity anomaly zone coincides with the central fault zone in the sub

  6. Improvement in light-output efficiency of near-ultraviolet InGaN-GaN LEDs fabricated on stripe patterned sapphire substrates

    International Nuclear Information System (INIS)

    Lee, Y.J.; Hsu, T.C.; Kuo, H.C.; Wang, S.C.; Yang, Y.L.; Yen, S.N.; Chu, Y.T.; Shen, Y.J.; Hsieh, M.H.; Jou, M.J.; Lee, B.J.

    2005-01-01

    InGaN/GaN multi-quantum wells near ultraviolet light-emitting diodes (LEDs) were fabricated on a patterned sapphire substrate (PSS) with parallel stripe along the sapphire direction by using low-pressure metal-organic chemical vapor deposition (MOCVD). The forward- and reverse-bias electrical characteristics of the stripe PSS LEDs are, respectively, similar and better than those of conventional LEDs on sapphire substrate. The output power of the epoxy package of stripe PSS LED was 20% higher than that of the conventional LEDs. The enhancement of output power is due not only to the reduction of dislocation density but also to the release of the guided light in LEDs by the geometric shape of the stripe PSS, according to the ray-tracing analysis

  7. Characterization of the Wheat Stripe Rust (Puccinia striiformis f. sp. tritici) Fungal Effector Candidate PEC6 and Its Corresponding Host Targets

    DEFF Research Database (Denmark)

    Liu, Changhai

    Stripe rust caused by Puccinia striiformis f. sp. tritici (Pst), is one of the most important fungal diseases on wheat worldwide and a serious threat to wheat production. Understanding the plant-microbe interaction mechanism is the basic step to assist future plant breeding aiming at increasing...... disease resistance. Based on the sequenced stripe rust fungus genome, several hundreds of small, secreted candidates for effector proteins are predicted. Effectors are believed to be pivotal for fungal pathogenicity with key roles in suppressing host defense. Thus, identifying key effectors...... and understanding their mechanisms of action is fundamentally important to guide future fights against the stripe rust disease. In this PhD project, I studied the potential function of six stripe rust fungal effector candidates which are highly expressed in haustoria, by employing the Pseudomonas fluorescens Et...

  8. Atypical colororation in the yellow-striped poisonous frog, Dendrobates truncatus (Cope, 1861), in the Colombian Magdalena river valley

    OpenAIRE

    Rivera Prieto, Diego A.; Marín C., David

    2017-01-01

    Herein we report an atypical coloration in one individual of the yellow-striped poisonous frog, Dendrobates truncatus, in Colombian Magdalena middle valley. The adult individual presented leucism, a rare phenomenon occurs in nature or at very low frequencies

  9. Prevalence of agglutinating antibodies to Toxoplasma gondii in striped skunks (Mephitis mephitis), opossums (Didelphis virginiana), and raccoons (Procyon lotor) from Connecticut

    OpenAIRE

    Mitchell, S. M.; Richardson, D. J.; Lindsay, D. S.

    2006-01-01

    The prevalence of agglutinating antibodies to Toxoplasma gondii was examined in striped skunks (Mephitis mephitis), opossums (Didelphis virginiana), and raccoons (Procyon lotor) from 8 cities in Connecticut. Ten (42%) of the 24 striped skunks, 2 of 7 (29%) opossums, and 12 of 12 (100%) raccoons were positive at dilutions of 1:50 or greater. These results suggest that T. gondii is prevalent in the environment, or prey items, or both, of these omnivores in Connecticut.

  10. Prevalence of agglutinating antibodies to Toxoplasma gondii in striped skunks (Mephitis mephitis), opossums (Didelphis virginiana), and raccoons (Procyon lotor) from Connecticut.

    Science.gov (United States)

    Mitchell, Sheila M; Richardson, Dennis J; Lindsay, David S

    2006-06-01

    The prevalence of agglutinating antibodies to Toxoplasma gondii was examined in striped skunks (Mephitis mephitis), opossums (Didelphis virginiana), and raccoons (Procyon lotor) from 8 cities in Connecticut. Ten (42%) of the 24 striped skunks, 2 of 7 (29%) opossums, and 12 of 12 (100%) raccoons were positive at dilutions of 1:50 or greater. These results suggest that T. gondii is prevalent in the environment, or prey items, or both, of these omnivores in Connecticut.

  11. Geographic distribution and spatial differentiation in the color pattern of abdominal stripes of the Neotropical stingless bee Melipona quadrifasciata (Hymenoptera: Apidae)

    OpenAIRE

    Batalha-Filho, Henrique; Melo, Gabriel A. R.; Waldschmidt, Ana M.; Campos, Lucio A. O.; Fernandes-Salomão, Tânia M.

    2009-01-01

    Melipona quadrifasciata Lepeletier, 1836, regionally known as "mandaçaia", has been traditionally divided in two distinct subspecies: M. quadrifasciata anthidioides and M. quadrifasciata quadrifasciata. The main difference between the subspecies refers to the yellow metasomal stripes which are continuous in M. q. quadrifasciata and discontinuous in M. q. anthidioides. This study investigated the geographic differentiation in the metasomal stripes and characterized the restriction sites in the...

  12. Genome-wide association mapping for stripe rust (Puccinia striiformis F. sp. tritici) in US Pacific Northwest winter wheat (Triticum aestivum L.).

    Science.gov (United States)

    Naruoka, Y; Garland-Campbell, K A; Carter, A H

    2015-06-01

    Potential novel and known QTL for race-specific all-stage and adult plant resistance to stripe rust were identified by genome-wide association mapping in the US PNW winter wheat accessions. Stripe rust (Puccinia striiformis F. sp. tritici; also known as yellow rust) is a globally devastating disease of wheat (Triticum aestivum L.) and a major threat to wheat production in the US Pacific Northwest (PNW), therefore both adult plant and all-stage resistance have been introduced into the winter wheat breeding programs in the PNW. The goal of this study was to identify quantitative trait loci (QTL) and molecular markers for these resistances through genome-wide association (GWAS) mapping in winter wheat accessions adapted to the PNW. Stripe rust response for adult plants was evaluated in naturally occurring epidemics in a total of nine environments in Washington State, USA. Seedling response was evaluated with three races under artificial inoculation in the greenhouse. The panel was genotyped with the 9K Illumina Wheat single nucleotide polymorphism (SNP) array and additional markers linked to previously reported genes and QTL for stripe rust resistance. The population was grouped into three sub-populations. Markers linked to Yr17 and previously reported QTL for stripe rust resistance were identified on chromosomes 1B, 2A, and 2B. Potentially novel QTL associated with race-specific seedling response were identified on chromosomes 1B and 1D. Potentially novel QTL associated with adult plant response were located on chromosomes 2A, 2B, 3B, 4A, and 4B. Stripe rust was reduced when multiple alleles for resistance were present. The resistant allele frequencies were different among sub-populations in the panel. This information provides breeders with germplasm and closely linked markers for stripe rust resistance to facilitate the transfer of multiple loci for durable stripe rust resistance into wheat breeding lines and cultivars.

  13. rapidSTRIPE H1N1 Test for Detection of the Pandemic Swine Origin Influenza A (H1N1) Virus▿

    OpenAIRE

    Patel, Pranav; Graser, Elmara; Robst, Stephan; Hillert, Roger; Meye, Axel; Hillebrand, Timo; Niedrig, Matthias

    2011-01-01

    The rapidSTRIPE H1N1 test, based on a nucleic acid lateral-flow assay, has been developed for diagnosis of a swine-origin influenza A (H1N1) virus. This test is simple and cost-effective and allows specific detection of the S-OIV A (H1N1) virus from swab sampling to final detection on a lateral-flow stripe within 2 to 3 h.

  14. Crosstalk reduction in large-scale autostereoscopic 3D-LED display based on black-stripe occupation ratio

    Science.gov (United States)

    Zeng, Xiang-Yao; Zhou, Xiong-Tu; Guo, Tai-Liang; Yang, Lan; Chen, En-Guo; Zhang, Yong-Ai

    2017-04-01

    Autostereoscopic 3D-LED displays using parallax barriers have several advantages. However, conventional designs do not consider the black stripes of regular LED panels. These cause immeasurable crosstalk owing to excess light from adjacent sub-pixels separated by the panels. To reduce the crosstalk in large-scale displays, we design a barrier in which the black-stripe occupation ratio is defined to quantify the crosstalk level in the LED system. A prototype is assembled and analyzed based on a three-in-one pixel LED-chip panel for a dual-viewpoint display. The improved parallax barrier meets the design requirements and achieves a low crosstalk level. Simulation and experiment results verify the effectiveness of the crosstalk-reduced design.

  15. Candidatus Renichlamydia lutjani, a Gram-negative bacterium in internal organs of blue striped snapper Lutjanus kasmira from Hawaii

    Science.gov (United States)

    Corsaro, Daniele; Work, Thierry M.

    2012-01-01

    The blue-striped snapper Lutjanus kasmira (Perciformes, Lutjanidae) are cosmopolitan in the Indo-Pacific but were introduced into Oahu, Hawaii, USA, in the 1950s and have since colonized most of the archipelago. Studies of microparasites in blue-striped snappers from Hawaii revealed chlamydia-like organisms (CLO) infecting the spleen and kidney, characterized by intracellular basophilic granular inclusions containing Gram-negative and Gimenez-positive bacteria similar in appearance to epitheliocysts when seen under light microscopy. We provide molecular evidence that CLO are a new member of Chlamydiae, i.e. Candidatus Renichlamydia lutjani, that represents the first reported case of chlamydial infection in organs other than the gill in fishes.

  16. Formation of periodic size-segregated stripe pattern via directed self-assembly of binary colloids and its mechanism

    Science.gov (United States)

    Das, Sayantan; Duraia, El-Shazly M.; Velev, Orlin D.; Amiri, Maedeh D.; Beall, Gary W.

    2018-03-01

    Convective self-assembly, well known for producing highly ordered monolayer structures, has been used in this study to create novel surface patterns using the binary mixture of colloids. We demonstrate that different patterns form, based on the size ratio (Small/Large) of the particles, and particles volume ratio. Surprisingly, certain binary particle mixtures resulted in spontaneous size based segregation. In some cases, the particle separation occurred along the direction of the meniscus contact line, and by the mere design of the process, we created periodic stripe patterns with controlled width. The particle volume fraction, size differences, surface tension, and the curvature of the meniscus played a crucial factor in the segregation process as well as in determining the width of each of the stripes. Furthermore, based on both empirical and numerical analysis, a mechanism for size-based segregation of particles via directed self-assembly is proposed.

  17. Antiphase boundaries, inversion, and ferroelastic domains in the striped-type superstructure of γ-brass Cu-Al alloys

    Science.gov (United States)

    Koyama, Y.; Hatano, M.; Tanimura, M.

    1996-05-01

    Features of the striped-type superstructure in γ-brass Cu-Al alloys have been investigated mainly by transmission electron microscopy in order to understand the role of a rhombohedral distortion in its stability. From dark field images taken from alloys exhibiting the superstructure, it was found that there exist two types of ferroelastic rhombohedral domains, which are in a twin relation. In other words, the superstructure is characterized by a periodic array of the ferroelastic domains as well as inversion antiphase boundaries. Because charge density waves should be responsible for the formation of the superstructure, as suggested in our previous paper [Phys. Rev. B 40, 5378 (1989)], the rhombohedral distortion must play a crucial role in their appearance. Presumably the distortion enlarges parallel portions of the Fermi surface. On the basis of the present experimental data, the interplay between the striped-type superstructure and the rhombohedral γ-brass structure is also discussed.

  18. Influence of stripe rust infection on the photosynthetic characteristics and antioxidant system of susceptible and resistant wheat cultivars at the adult plant stage.

    Science.gov (United States)

    Chen, Yang-Er; Cui, Jun-Mei; Su, Yan-Qiu; Yuan, Shu; Yuan, Ming; Zhang, Huai-Yu

    2015-01-01

    Wheat stripe rust (Puccinia striiformis f. sp. tritici, Pst), is one of the most serious diseases of wheat (Triticum aestivum L.) worldwide. To gain a better understanding of the protective mechanism against stripe rust at the adult plant stage, the differences in photosystem II and antioxidant enzymatic systems between susceptible and resistant wheat in response to stripe rust disease (P. striiformis) were investigated. We found that chlorophyll fluorescence and the activities of the antioxidant enzymes were higher in resistant wheat than in susceptible wheat after stripe rust infection. Compared with the susceptible wheat, the resistant wheat accumulated a higher level of D1 protein and a lower level of reactive oxygen species after infection. Furthermore, our results demonstrate that D1 and light-harvesting complex II (LHCII) phosphorylation are involved in the resistance to stripe rust in wheat. The CP29 protein was phosphorylated under stripe rust infection, like its phosphorylation in other monocots under environmental stresses. More extensive damages occur on the thylakoid membranes in the susceptible wheat compared with the resistant wheat. The findings provide evidence that thylakoid protein phosphorylation and antioxidant enzyme systems play important roles in plant responses and defense to biotic stress.

  19. Analysis of Yellow Striped Mutants of Zea mays Reveals Novel Loci Contributing to Iron Deficiency Chlorosis

    Directory of Open Access Journals (Sweden)

    David Chan-Rodriguez

    2018-02-01

    Full Text Available The micronutrient iron (Fe is essential for photosynthesis, respiration, and many other processes, but it is only sparingly soluble in aqueous solution, making adequate acquisition by plants a serious challenge. Fe is a limiting factor for plant growth on approximately 30% of the world’s arable lands. Moreover, Fe deficiency in humans is a global health issue, affecting 1.62 billion people, or about 25% of the world’s population. It is imperative that we gain a better understanding of the mechanisms that plants use to regulate iron homeostasis, since these will be important targets for future biofortification and crop improvement strategies. Grasses and non-grasses have evolved independent mechanisms for primary iron uptake from the soil. The grasses, which include most of the world’s staple grains, have evolved a distinct ‘chelation’ mechanism to acquire iron from the soil. Strong iron chelators called phytosiderophores (PSs are synthesized by grasses and secreted into the rhizosphere where they bind and solubilize Fe(III. The Fe(III-PS complex is then taken up into root cells via transporters specific for the Fe(III-PS complex. In this study, 31 novel, uncharacterized striped maize mutants available through the Maize Genetics Cooperation Stock Center (MGCSC were analyzed to determine whether their mutant phenotypes are caused by decreased iron. Many of these proved to be either pale yellow or white striped mutants. Complementation tests were performed by crossing the MGCSC mutants to ys1 and ys3 reference mutants. This allowed assignment of 10 ys1 alleles and 4 ys3 alleles among the novel mutants. In addition, four ys∗ mutant lines were identified that are not allelic to either ys1 or ys3. Three of these were characterized as being non-allelic to each other and as having low iron in leaves. These represent new genes involved in iron acquisition by maize, and future cloning of these genes may reveal novel aspects of the grass iron

  20. Constraining the heat flux between Enceladus’ tiger stripes: numerical modeling of funiscular plains formation

    Science.gov (United States)

    Bland, Michael T.; McKinnon, William B; Schenk, Paul M.

    2015-01-01

    The Cassini spacecraft’s Composite Infrared Spectrometer (CIRS) has observed at least 5 GW of thermal emission at Enceladus’ south pole. The vast majority of this emission is localized on the four long, parallel, evenly-spaced fractures dubbed tiger stripes. However, the thermal emission from regions between the tiger stripes has not been determined. These spatially localized regions have a unique morphology consisting of short-wavelength (∼1 km) ridges and troughs with topographic amplitudes of ∼100 m, and a generally ropy appearance that has led to them being referred to as “funiscular terrain.” Previous analysis pursued the hypothesis that the funiscular terrain formed via thin-skinned folding, analogous to that occurring on a pahoehoe flow top (Barr, A.C., Preuss, L.J. [2010]. Icarus 208, 499–503). Here we use finite element modeling of lithospheric shortening to further explore this hypothesis. Our best-case simulations reproduce funiscular-like morphologies, although our simulated fold wavelengths after 10% shortening are 30% longer than those observed. Reproducing short-wavelength folds requires high effective surface temperatures (∼185 K), an ice lithosphere (or high-viscosity layer) with a low thermal conductivity (one-half to one-third that of intact ice or lower), and very high heat fluxes (perhaps as great as 400 mW m−2). These conditions are driven by the requirement that the high-viscosity layer remain extremely thin (≲200 m). Whereas the required conditions are extreme, they can be met if a layer of fine grained plume material 1–10 m thick, or a highly fractured ice layer >50 m thick insulates the surface, and the lithosphere is fractured throughout as well. The source of the necessary heat flux (a factor of two greater than previous estimates) is less obvious. We also present evidence for an unusual color/spectral character of the ropy terrain, possibly related to its unique surface texture. Our simulations demonstrate

  1. Small RNAs from the wheat stripe rust fungus (Puccinia striiformis f.sp. tritici).

    Science.gov (United States)

    Mueth, Nicholas A; Ramachandran, Sowmya R; Hulbert, Scot H

    2015-09-21

    Wheat stripe rust, caused by Puccinia striiformis f. sp. tritici, is a costly global disease that burdens farmers with yield loss and high fungicide expenses. This sophisticated biotrophic parasite infiltrates wheat leaves and develops infection structures inside host cells, appropriating nutrients while suppressing the plant defense response. Development in most eukaryotes is regulated by small RNA molecules, and the success of host-induced gene silencing technology in Puccinia spp. implies the existence of a functional RNAi system. However, some fungi lack this capability, and small RNAs have not yet been reported in rust fungi. The objective of this study was to determine whether P. striiformis carries an endogenous small RNA repertoire. We extracted small RNA from rust-infected wheat flag leaves and performed high-throughput sequencing. Two wheat cultivars were analyzed: one is susceptible; the other displays partial high-temperature adult plant resistance. Fungal-specific reads were identified by mapping to the P. striiformis draft genome and removing reads present in uninfected control libraries. Sequencing and bioinformatics results were verified by RT-PCR. Like other RNAi-equipped fungi, P. striiformis produces large numbers of 20-22 nt sequences with a preference for uracil at the 5' position. Precise post-transcriptional processing and high accumulation of specific sRNA sequences were observed. Some predicted sRNA precursors possess a microRNA-like stem-loop secondary structure; others originate from much longer inverted repeats containing gene sequences. Finally, sRNA-target prediction algorithms were used to obtain a list of putative gene targets in both organisms. Predicted fungal target genes were enriched for kinases and small secreted proteins, while the list of wheat targets included homologs of known plant resistance genes. This work provides an inventory of small RNAs endogenous to an important plant pathogen, enabling further exploration of gene

  2. Cortical plasticity following stripe rearing in the marsupial Monodelphis domestica: neural response properties of V1.

    Science.gov (United States)

    Dooley, James C; Donaldson, Michaela S; Krubitzer, Leah A

    2017-02-01

    The functional organization of the primary visual area (V1) and the importance of sensory experience in its normal development have been well documented in eutherian mammals. However, very few studies have investigated the response properties of V1 neurons in another large class of mammals, or whether sensory experience plays a role in shaping their response properties. Thus we reared opossums (Monodelphis domestica) in normal and vertically striped cages until they reached adulthood. They were then anesthetized using urethane, and electrophysiological techniques were used to examine neuronal responses to different orientations, spatial and temporal frequencies, and contrast levels. For normal opossums, we observed responses to the temporal and spatial characteristics of the stimulus to be similar to those described in small, nocturnal, eutherian mammals such as rats and mice; neurons in V1 responded maximally to stimuli at 0.09 cycles per degree and 2.12 cycles per second. Unlike other eutherians, but similar to other marsupials investigated, only 40% of the neurons were orientation selective. In stripe-reared animals, neurons were significantly more likely to respond to vertical stimuli at a wider range of spatial frequencies, and were more sensitive to gratings at lower contrast values compared with normal animals. These results are the first to demonstrate experience-dependent plasticity in the visual system of a marsupial species. Thus the ability of cortical neurons to alter their properties based on the dynamics of the visual environment predates the emergence of eutherian mammals and was likely present in our earliest mammalian ancestors. These results are the first description of visual response properties of the most commonly studied marsupial model organism, the short-tailed opossum (Monodelphis domestica). Further, these results are the first to demonstrate experience-dependent plasticity in the visual system of a marsupial species. Thus the ability of

  3. Implications of white striping and spaghetti meat abnormalities on meat quality and histological features in broilers.

    Science.gov (United States)

    Baldi, G; Soglia, F; Mazzoni, M; Sirri, F; Canonico, L; Babini, E; Laghi, L; Cavani, C; Petracci, M

    2018-01-01

    During the past few years, there has been an increasing prevalence of broiler breast muscle abnormalities, such as white striping (WS) and wooden breast conditions. More recently, a new muscular abnormality termed as spaghetti meat (SM) because of the altered structural integrity of the Pectoralis major muscle often associated with WS has emerged. Thus, this study aimed at evaluating the effects of WS and SM conditions, occurring alone or combined within the same P. major muscle, on meat quality traits and muscle histology. In two replications, 96 P. major muscles were classified into four classes: normal (N), WS, SM and WS/SM. The whole fillet was used for weight assessment and morphometric measurements, then each sample was cut in order to separate the superficial layer from the deep one and used to evaluate proximate composition, histological features, nuclear magnetic resonance relaxation times, functional properties and both myofibrillar and sarcoplasmic proteins profile. Fillets affected by WS and SM abnormalities exhibited higher weights and increased thickness and length. SM condition was associated with a relevant decrease in protein content coupled with a significant increase in moisture level, whereas fat content was affected only by the simultaneous presence of WS. Histological evaluations revealed that abnormal samples were characterized by several degenerative aspects that almost completely concerned the superficial layer of the fillets. White striped fillets exhibited necrosis and lysis of fibers, fibrosis, lipidosis, loss of cross striation and vacuolar degeneration. Moreover, SM samples were characterized by poor fiber uniformity and a progressive rarefaction of the endo- and peri-mysial connective tissue, whereas WS/SM fillets showed intermediate histological features. Nuclear magnetic resonance relaxation analysis revealed a higher proportion of extra-myofibrillar water in the superficial section of all the abnormal fillets, especially in SM

  4. Cortical plasticity following stripe rearing in the marsupial Monodelphis domestica: neural response properties of V1

    Science.gov (United States)

    Dooley, James C.; Donaldson, Michaela S.

    2016-01-01

    The functional organization of the primary visual area (V1) and the importance of sensory experience in its normal development have been well documented in eutherian mammals. However, very few studies have investigated the response properties of V1 neurons in another large class of mammals, or whether sensory experience plays a role in shaping their response properties. Thus we reared opossums (Monodelphis domestica) in normal and vertically striped cages until they reached adulthood. They were then anesthetized using urethane, and electrophysiological techniques were used to examine neuronal responses to different orientations, spatial and temporal frequencies, and contrast levels. For normal opossums, we observed responses to the temporal and spatial characteristics of the stimulus to be similar to those described in small, nocturnal, eutherian mammals such as rats and mice; neurons in V1 responded maximally to stimuli at 0.09 cycles per degree and 2.12 cycles per second. Unlike other eutherians, but similar to other marsupials investigated, only 40% of the neurons were orientation selective. In stripe-reared animals, neurons were significantly more likely to respond to vertical stimuli at a wider range of spatial frequencies, and were more sensitive to gratings at lower contrast values compared with normal animals. These results are the first to demonstrate experience-dependent plasticity in the visual system of a marsupial species. Thus the ability of cortical neurons to alter their properties based on the dynamics of the visual environment predates the emergence of eutherian mammals and was likely present in our earliest mammalian ancestors. NEW & NOTEWORTHY These results are the first description of visual response properties of the most commonly studied marsupial model organism, the short-tailed opossum (Monodelphis domestica). Further, these results are the first to demonstrate experience-dependent plasticity in the visual system of a marsupial species

  5. A record of Striped Hog-nosed Skunk Conepatus semistriatus in central Panama, between two known sub-ranges

    OpenAIRE

    Esser, H.J.; Liefting, Y.; Kays, R.; Jansen, P.A.

    2012-01-01

    Striped Hog-nosed Skunk Conepatus semistriatus was camera-trapped in central Panama. The photographs, taken in a densely forested area, probably belong to a single, wandering, individual. These photographs represent the easternmost record of C. semistriatus in Central America and confirm an earlier, unvouchered, report that its distribution in Panama is larger than previously thought. The record is in the centre of the 700-km wide gap between two sub-ranges, suggesting that the species has a ...

  6. Variation in the isotopic composition of striped weakfish Cynoscion guatucupa of the Southwest Atlantic Ocean in response to dietary shifts

    Directory of Open Access Journals (Sweden)

    M. N. Paso Viola

    2017-08-01

    Full Text Available Abstract The aim of this study was to analyze the isotopic composition in muscle of striped weakfish Cynoscion guatucupa from Southwest Atlantic Ocean in order to evaluate a possible variation in δ13C and δ15N in response to dietary shifts that occur as animals grow. We also explored for isotopic evidence of differences between sample locations. The results showed an agreement between isotope analysis and previous conventional studies. Differences in the isotope composition between sampling location were not observed. A positive relation exists between isotope values and total body length of the animals. The Cluster analysis defined three groups of size classes, validated by the MDS. Differences in the relative consumption of prey species in each size class were also observed performing isotope mixing models (SIAR. Variation in δ15N among size classes would be associated with the consumption of a different type of prey as animals grow. Small striped weakfish feed on small crustaceans and progressively increase their consumption of fish (anchovy, Engraulis anchoita, increasing by this way their isotope values. On the other hand, differences in δ13C values seemed to be related to age-class specific spatial distribution patterns. Therefore, large and small striped weakfish remain specialized but feeding on different prey at different trophic levels. These results contribute to the study of the diet of striped weakfish, improve the isotopic ecology models and highlight on the importance of accounting for variation in the isotopic composition in response to dietary shifts with the size of one of the most important fishery resources in the region.

  7. Overfishing of small pelagic fishes increases trophic overlap between immature and mature striped dolphins in the Mediterranean Sea.

    Science.gov (United States)

    Gómez-Campos, Encarna; Borrell, Assumpció; Cardona, Luis; Forcada, Jaume; Aguilar, Alex

    2011-01-01

    The interactions among diet, ecology, physiology, and biochemistry affect N and C stable isotope signatures in animal tissues. Here, we examined if ecological segregation among animals in relation to sex and age existed by analyzing the signatures of δ(15)N and δ(13)C in the muscle of Western Mediterranean striped dolphins. Moreover, we used a Bayesian mixing model to study diet composition and investigated potential dietary changes over the last two decades in this population. For this, we compared isotope signatures in samples of stranded dolphins obtained during two epizootic events occurring in 1990 and 2007-2008. Mean δ(13)C values for females and males were not significantly different, but age-related variation indicated δ(13)C enrichment in both sexes, suggesting that females and males most likely fed in the same general areas, increasing their consumption of benthic prey with age. Enrichment of δ(15)N was only observed in females, suggesting a preference for larger or higher trophic level prey than males, which could reflect different nutritional requirements. δ(13)C values showed no temporal variation, although the mean δ(15)N signature decreased from 1990 to 2007-2008, which could indicate a dietary shift in the striped dolphin over the last two decades. The results of SIAR indicated that in 1990, hake and sardine together contributed to 60% on the diet of immature striped dolphins, and close to 90% for mature striped dolphins. Conversely, the diet of both groups in 2007-2008 was more diverse, as hake and sardine contributed to less than 40% of the entire diet. These results suggest a dietary change that was possibly related to changes in food availability, which is consistent with the depletion of sardine stocks by fishing.

  8. First record of the Indo-Pacific striped eel catfish, Plotosus lineatus (Thunberg, 1787 from Turkish marine waters

    Directory of Open Access Journals (Sweden)

    Servet Ahmet Doğdu

    2016-05-01

    Full Text Available Three specimens of striped eel catfish, Plotosus lineatus (Thunberg, 1787 were caught by a spear gun at depths of 20 m on 4 April 2016 from Iskenderun Bay (Çevlik harbour, Northeastern Mediterranean coast of Turkey. With the present study, P. lineatus is the first time reported from Turkish marine waters, in the Iskenderun Bay, the Northeastern Mediterranean and also this is the first Plotosid species recorded from Turkish Seas.

  9. San Francisco Estuary Striped Bass Migration History Determined by Electron-microprobe Analysis of Otolith Sr/Ca Ratio

    Energy Technology Data Exchange (ETDEWEB)

    Ostrach, D J; Phillis, C C; Weber, P K; Ingram, B L; Zinkl, J G

    2004-09-17

    Habitat use has been shown to be an important factor in the bioaccumulation of contaminants in striped bass. This study examines migration in striped bass as part of a larger study investigating bioaccumulation and maternal transfer of xenobiotics to progeny in the San Francisco Estuary system. Habitat use, residence time and spawning migration over the life of females (n = 23) was studied. Female striped bass were collected between Knights Landing and Colusa on the Sacramento River during the spawning runs of 1999 and 2001. Otoliths were removed, processed and aged via otolith microstructure. Subsequently, otoliths were analyzed for strontium/calcium (Sr/Ca) ratio using an electron-microprobe to measure salinity exposure and to distinguish freshwater, estuary, and marine habitat use. Salinity exposure during the last year before capture was examined more closely for comparison of habitat use by the maternal parent to contaminant burden transferred to progeny. Results were selectively confirmed by ion microprobe analyses for habitat use. The Sr/Ca data demonstrate a wide range of migratory patterns. Age of initial ocean entry differs among individuals before returning to freshwater, presumably to spawn. Some fish reside in freshwater year-round, while others return to more saline habitats and make periodic migrations to freshwater. Frequency of habitat shifts and residence times differs among fish, as well as over the lifetime of individual fish. While at least one fish spent its final year in freshwater, the majority of spawning fish spent their final year in elevated salinity. However, not all fish migrated to freshwater to spawn in the previous year. Results from this investigation concerning migration history in striped bass can be combined with contaminant and histological developmental analyses to better understand the bioaccumulation of contaminants and the subsequent effects they and habitat use have on fish populations in the San Francisco Estuary system.

  10. Overfishing of small pelagic fishes increases trophic overlap between immature and mature striped dolphins in the Mediterranean Sea.

    Directory of Open Access Journals (Sweden)

    Encarna Gómez-Campos

    Full Text Available The interactions among diet, ecology, physiology, and biochemistry affect N and C stable isotope signatures in animal tissues. Here, we examined if ecological segregation among animals in relation to sex and age existed by analyzing the signatures of δ(15N and δ(13C in the muscle of Western Mediterranean striped dolphins. Moreover, we used a Bayesian mixing model to study diet composition and investigated potential dietary changes over the last two decades in this population. For this, we compared isotope signatures in samples of stranded dolphins obtained during two epizootic events occurring in 1990 and 2007-2008. Mean δ(13C values for females and males were not significantly different, but age-related variation indicated δ(13C enrichment in both sexes, suggesting that females and males most likely fed in the same general areas, increasing their consumption of benthic prey with age. Enrichment of δ(15N was only observed in females, suggesting a preference for larger or higher trophic level prey than males, which could reflect different nutritional requirements. δ(13C values showed no temporal variation, although the mean δ(15N signature decreased from 1990 to 2007-2008, which could indicate a dietary shift in the striped dolphin over the last two decades. The results of SIAR indicated that in 1990, hake and sardine together contributed to 60% on the diet of immature striped dolphins, and close to 90% for mature striped dolphins. Conversely, the diet of both groups in 2007-2008 was more diverse, as hake and sardine contributed to less than 40% of the entire diet. These results suggest a dietary change that was possibly related to changes in food availability, which is consistent with the depletion of sardine stocks by fishing.

  11. Genome Sequence of Acidovorax avenae Strain T10_61 Associated with Sugarcane Red Stripe in Argentina

    Science.gov (United States)

    Fontana, Cecilia A.; Bassi, Daniela; Puglisi, Edoardo; Salazar, Sergio M.; Vignolo, Graciela M.; Coccocelli, Pier S.

    2016-01-01

    Red stripe of sugarcane in Argentina is a bacterial disease caused by Acidovorax avenae. The genome sequence from the first isolate of this bacterium in Argentina is presented here. The draft genome of the A. avenae T10_61 strain contains 5,646,552 bp and has a G+C content of 68.6 mol%. PMID:26847889

  12. Variation in the isotopic composition of striped weakfish Cynoscion guatucupa of the Southwest Atlantic Ocean in response to dietary shifts.

    Science.gov (United States)

    Viola, M N Paso; Riccialdelli, L; Jaureguizar, A; Panarello, H O; Cappozzo, H L

    2017-08-17

    The aim of this study was to analyze the isotopic composition in muscle of striped weakfish Cynoscion guatucupa from Southwest Atlantic Ocean in order to evaluate a possible variation in δ13C and δ15N in response to dietary shifts that occur as animals grow. We also explored for isotopic evidence of differences between sample locations. The results showed an agreement between isotope analysis and previous conventional studies. Differences in the isotope composition between sampling location were not observed. A positive relation exists between isotope values and total body length of the animals. The Cluster analysis defined three groups of size classes, validated by the MDS. Differences in the relative consumption of prey species in each size class were also observed performing isotope mixing models (SIAR). Variation in δ15N among size classes would be associated with the consumption of a different type of prey as animals grow. Small striped weakfish feed on small crustaceans and progressively increase their consumption of fish (anchovy, Engraulis anchoita), increasing by this way their isotope values. On the other hand, differences in δ13C values seemed to be related to age-class specific spatial distribution patterns. Therefore, large and small striped weakfish remain specialized but feeding on different prey at different trophic levels. These results contribute to the study of the diet of striped weakfish, improve the isotopic ecology models and highlight on the importance of accounting for variation in the isotopic composition in response to dietary shifts with the size of one of the most important fishery resources in the region.

  13. Striped Phase of 3-Hexylthiophene Self-Assembled Monolayers on Au(1 11) Formed by Vapor Phase Deposition.

    Science.gov (United States)

    Kim, Youngwoo; Kang, Hungu; Tsunoi, Azuho; Hayashi, Tomohiro; Hara, Masahiko; Noh, Jaegeun

    2016-03-01

    The formation and surface structure of 3-hexylthiophene (HTP) self-assembled monolayers (SAMs) on Au(111) prepared by solution and ambient-pressure vapor deposition at room temperature (RT) for 24 h were examined by means of scanning tunneling microscopy (STM) and cyclic voltammetry (CV). STM imaging revealed that HTP SAMs formed by solution deposition have a disordered phase, whereas those formed by vapor deposition exhibit a striped phase with a unidirectional orientation. The distance between the rows in the striped phase was measured to be 1.3 ± 0.1 nm, and the hexyl molecular backbones of HTP in the SAMs on Au(111) are oriented parallel to the Au(111) surface with the head-to-head orientation. From this STM observation, we suggest that the formation of this striped phase in HTP SAMs prepared by vapor deposition were mainly driven by the optimization of van der Waals interactions between the hexyl chains on the surface. CV measurements also demonstrated that HTP SAMs show a high blocking efficiency for electron transfer reactions between electrolytes and the gold electrode, suggesting the formation of SAMs on Au(111) from the vapor phase. Our results obtained here will be very useful for understanding the formation and structure of HTP SAMs on Au(111) surfaces and how they are influenced by deposition method.

  14. A Cross Structured Light Sensor and Stripe Segmentation Method for Visual Tracking of a Wall Climbing Robot

    Science.gov (United States)

    Zhang, Liguo; Sun, Jianguo; Yin, Guisheng; Zhao, Jing; Han, Qilong

    2015-01-01

    In non-destructive testing (NDT) of metal welds, weld line tracking is usually performed outdoors, where the structured light sources are always disturbed by various noises, such as sunlight, shadows, and reflections from the weld line surface. In this paper, we design a cross structured light (CSL) to detect the weld line and propose a robust laser stripe segmentation algorithm to overcome the noises in structured light images. An adaptive monochromatic space is applied to preprocess the image with ambient noises. In the monochromatic image, the laser stripe obtained is recovered as a multichannel signal by minimum entropy deconvolution. Lastly, the stripe centre points are extracted from the image. In experiments, the CSL sensor and the proposed algorithm are applied to guide a wall climbing robot inspecting the weld line of a wind power tower. The experimental results show that the CSL sensor can capture the 3D information of the welds with high accuracy, and the proposed algorithm contributes to the weld line inspection and the robot navigation. PMID:26110403

  15. Melanophore migration and survival during zebrafish adult pigment stripe development require the immunoglobulin superfamily adhesion molecule Igsf11.

    Directory of Open Access Journals (Sweden)

    Dae Seok Eom

    Full Text Available The zebrafish adult pigment pattern has emerged as a useful model for understanding the development and evolution of adult form as well as pattern-forming mechanisms more generally. In this species, a series of horizontal melanophore stripes arises during the larval-to-adult transformation, but the genetic and cellular bases for stripe formation remain largely unknown. Here, we show that the seurat mutant phenotype, consisting of an irregular spotted pattern, arises from lesions in the gene encoding Immunoglobulin superfamily member 11 (Igsf11. We find that Igsf11 is expressed by melanophores and their precursors, and we demonstrate by cell transplantation and genetic rescue that igsf11 functions autonomously to this lineage in promoting adult stripe development. Further analyses of cell behaviors in vitro, in vivo, and in explant cultures ex vivo demonstrate that Igsf11 mediates adhesive interactions and that mutants for igsf11 exhibit defects in both the migration and survival of melanophores and their precursors. These findings identify the first in vivo requirements for igsf11 as well as the first instance of an immunoglobulin superfamily member functioning in pigment cell development and patterning. Our results provide new insights into adult pigment pattern morphogenesis and how cellular interactions mediate pattern formation.

  16. Fish condensate as effective replacer of fish meal protein in diet for striped snakehead, Channa striata (Bloch).

    Science.gov (United States)

    Wattanakul, Wattana; Wattanakul, Uraiwan; Thongprajukaew, Karun; Muenpo, Chutchawan

    2017-02-01

    The optimal protein replacement of fish meal (FM) by fish condensate (FC) was investigated in striped snakehead, Channa striata (Bloch) (1.78 ± 0.02 g initial weight). The FM-based diet (0FC) was replaced by substituting protein from FC for 100 (100FC), 200 (200FC), 300 (300FC), 400 (400FC), 500 (500FC) or 600 (600FC) g kg -1 of the FM, and a commercial diet (CD) for carnivorous fish was included for comparison. The experiment was conducted indoors under completely randomized design (8 treatments × 3 replications × 60 fish per pond) over a 6-month trial. There were no significant differences in water quality during the experiment. The fish fed with 500FC had superior growth performance and feed utilization. This dietary treatment gave similar levels to all observed specific activities of digestive enzymes as did baseline 0FC. Survival, carcass composition, hematological parameters and liver histopathology were not negatively impacted by this protein replacement level. Economic analysis also supports the use of this by-product as a potent protein replacer in striped snakehead diet. Findings from the current study indicate that a 500 g kg -1 protein replacement of FM by FC is near optimal for striped snakehead, and similar use of it in the aquafeed of other species appears worth further studies.

  17. Simulation study of a depth-encoding positron emission tomography detector inserting horizontal-striped glass between crystal layers

    Science.gov (United States)

    Kim, Kyu Bom; Choi, Yong; Kang, Jihoon

    2017-10-01

    This study introduces a depth-encoding positron emission tomography (PET) detector inserting a horizontal-striped glass between the pixilated scintillation crystal layers. This design allows light spreading so that scintillation photons can travel only through the X direction and allows alteration in the light distribution so that it can generate a unique pattern diagram of the two-dimensional (2-D) flood histogram that identifies depth position as well as X-Y position of γ-ray interaction. A Monte Carlo simulation was conducted for the assessment of the depth of interaction (DOI)-PET detector. The traced light distribution for each event was converted into the 2-D flood histogram. Light loss caused by inserting the horizontal-striped glass between the crystal layers was estimated. Applicable weighting factors were examined for each DOI-PET detector. No considerable degradation of light loss was observed. The flood histogram, without overlapping of each crystal position, can be generated for the DOI detector based on each crystal block by inserting the horizontal-striped glass with a thickness of >1 mm and the modified resistive charge division networks with applicable weighting factors. This study demonstrated that the proposed DOI-PET detector can extract the three-dimensional γ-ray interaction position without considerable performance degradations of the PET detector from the 2-D flood histogram.

  18. Stripe-PZT Sensor-Based Baseline-Free Crack Diagnosis in a Structure with a Welded Stiffener

    Directory of Open Access Journals (Sweden)

    Yun-Kyu An

    2016-09-01

    Full Text Available This paper proposes a stripe-PZT sensor-based baseline-free crack diagnosis technique in the heat affected zone (HAZ of a structure with a welded stiffener. The proposed technique enables one to identify and localize a crack in the HAZ using only current data measured using a stripe-PZT sensor. The use of the stripe-PZT sensor makes it possible to significantly improve the applicability to real structures and minimize man-made errors associated with the installation process by embedding multiple piezoelectric sensors onto a printed circuit board. Moreover, a new frequency-wavenumber analysis-based baseline-free crack diagnosis algorithm minimizes false alarms caused by environmental variations by avoiding simple comparison with the baseline data accumulated from the pristine condition of a target structure. The proposed technique is numerically as well as experimentally validated using a plate-like structure with a welded stiffener, reveling that it successfully identifies and localizes a crack in HAZ.

  19. Toward nonlinear magnonics: Intensity-dependent spin-wave switching in insulating side-coupled magnetic stripes

    Science.gov (United States)

    Sadovnikov, A. V.; Odintsov, S. A.; Beginin, E. N.; Sheshukova, S. E.; Sharaevskii, Yu. P.; Nikitov, S. A.

    2017-10-01

    We demonstrate that the nonlinear spin-wave transport in two laterally parallel magnetic stripes exhibit the intensity-dependent power exchange between the adjacent spin-wave channels. By the means of Brillouin light scattering technique, we investigate collective nonlinear spin-wave dynamics in the presence of magnetodipolar coupling. The nonlinear intensity-dependent effect reveals itself in the spin-wave mode transformation and differential nonlinear spin-wave phase shift in each adjacent magnetic stripe. The proposed analytical theory, based on the coupled Ginzburg-Landau equations, predicts the geometry design involving the reduction of power requirement to the all-magnonic switching. A very good agreement between calculation and experiment was found. In addition, a micromagnetic and finite-element approach has been independently used to study the nonlinear behavior of spin waves in adjacent stripes and the nonlinear transformation of spatial profiles of spin-wave modes. Our results show that the proposed spin-wave coupling mechanism provides the basis for nonlinear magnonic circuits and opens the perspectives for all-magnonic computing architecture.

  20. Perfluorinated alkyl acids and fecundity assessment in striped mullet (Mugil cephalus) at Merritt Island national wildlife refuge.

    Science.gov (United States)

    Bangma, Jacqueline T; Reiner, Jessica L; Lowers, Russell H; Cantu, Theresa M; Scott, Jacob; Korte, Jeffrey E; Scheidt, Doug M; McDonough, Chris; Tucker, Jonathan; Back, Brenton; Adams, Douglas H; Bowden, John A

    2018-04-01

    This study investigated wild caught striped mullet (Mugil cephalus) at Merritt Island National Wildlife Refuge (MINWR) for levels of 15 perfluoroalkyl acids (PFAA) in tandem with individual fecundity measurements (Oocyte sub-stage 2 late, n=42) and oocyte reproductive stages (Stages 1-5, n=128). PFAA measurements were quantified in striped mullet liver (n=128), muscle (n=49), and gonad (n=10). No significant negative impacts of liver PFAA burden on wild-caught, mullet fecundity endpoints were observed in this study; however, changes in PFAA were observed in the liver as mullet progressed through different sub-stages of oocyte development. Of the PFAA with significant changes by sub-stage of oocyte development, the carboxylic acids (perfluorooctanoic acid, perfluorononanoic acid, and perfluorotridecanoic acid) increased in the liver with increasing sub-stage while the sulfonic acid and its precursor (perfluorooctanesulfonic acid (PFOS) and perfluorooctanesulfonamide, respectively) decreased in the liver with increasing sub-stage of oocyte development. This is a unique find and suggests PFAA change location of compartmentalization as mullet progress towards spawning. Investigations also revealed higher than expected median muscle and gonad levels of PFOS in striped mullet collected at MINWR (9.01ng/g and 80.2ng/g, respectively). Published by Elsevier B.V.

  1. Genetic effects for controlling stripe rust (Puccinia striiformis f. sp. tritici resistance in wheat through joint segregation analysis

    Directory of Open Access Journals (Sweden)

    Kalim Ullah

    2016-06-01

    Full Text Available Mixed inheritance analysis using joint segregation analysis (JSA for stripe rust (Puccinia striiformis f. sp. tritici resistance was carried out in six basic populations (P1, F1, P2, BC1, BC2 and F2 of four wheat crosses (Hashim-08 × LU-26, Farid-06 × Shafaq, Parula × Blue Silver, TD-1 × D-97603 during crop season 2009 to 2012. Genes controlling stripe rust resistance were assessed by using area under disease progress curve (AUDPC. The AUDPC was controlled by mixed two additive-dominant-epistatic major genes plus additive-dominant-epistasis of polygenes in cross Hashim-08 × LU-26 (model E, while in Farid-06 × Shafaq, it was controlled by mixed two major additive-dominant genes plus additive-dominant polygenes (model E-2. In cross Parula × Blue Silver, the AUDPC was managed by additive, dominance and epistasis of two major genes (model B-1, however, it was controlled by mixed one major gene and additive dominant polygenes in cross TD-1 × D-97603 (model D-1. Genetic variation and heritability was higher in major genes than polygene for all the crosses showing that AUDPC was mainly controlled by major genes. The genetic behavior of the AUDPC revealed that stripe rust resistance was controlled by mixed interaction of one to two major genes plus polygenes.

  2. Introgression of leaf rust and stripe rust resistance from Sharon goatgrass (Aegilops sharonensis Eig) into bread wheat (Triticum aestivum L.).

    Science.gov (United States)

    Millet, E; Manisterski, J; Ben-Yehuda, P; Distelfeld, A; Deek, J; Wan, A; Chen, X; Steffenson, B J

    2014-06-01

    Leaf rust and stripe rust are devastating wheat diseases, causing significant yield losses in many regions of the world. The use of resistant varieties is the most efficient way to protect wheat crops from these diseases. Sharon goatgrass (Aegilops sharonensis or AES), which is a diploid wild relative of wheat, exhibits a high frequency of leaf and stripe rust resistance. We used the resistant AES accession TH548 and induced homoeologous recombination by the ph1b allele to obtain resistant wheat recombinant lines carrying AES chromosome segments in the genetic background of the spring wheat cultivar Galil. The gametocidal effect from AES was overcome by using an "anti-gametocidal" wheat mutant. These recombinant lines were found resistant to highly virulent races of the leaf and stripe rust pathogens in Israel and the United States. Molecular DArT analysis of the different recombinant lines revealed different lengths of AES segments on wheat chromosome 6B, which indicates the location of both resistance genes.

  3. Detecting Rice stripe virus (RSV) in the small brown planthopper (Laodelphax striatellus) with high specificity by RT-PCR.

    Science.gov (United States)

    Lijun, Cai; Xizhi, Ma; Lin, Kang; Kejing, Deng; Shouyuan, Zhao; Changben, Li

    2003-09-01

    Rice stripe disease, caused by Rice stripe virus (RSV), may lead to severe or even crippling losses in many rice-cultured countries and regions. As the most important vector of RSV, the small brown planthopper (SBPH) (Laodelphax striatellus) is largely responsible for the epidemic phase of the disease. Therefore, a rapid identification of RSV in the SBPH is of a great need for disease forecasting. A reverse transcription polymerase chain reaction (RT-PCR) assay is described to amplify a RSV gene in individual L. striatellus. By using primers matched to the viral RNA dependent RNA polymerase gene in RNA1, a 445 bp product was detected in viruliferous SBPHs. Meanwhile, the PCR products produced by the SBPH actin primers constructed across the boundary of an intron and an exon were used as RNA specific positive control for each stage of the experiment to ensure the validity of the negative results. Duplex RT-PCR conditions were established for the simultaneous detection of RSV and actin. This approach can be used for the early detection of RSV in L. striatellus and the subsequent rice stripe disease forecasting.

  4. Mycobacterium shottsii sp. nov., a slowly growing species isolated from Chesapeake Bay striped bass (Morone saxatilis)

    Science.gov (United States)

    Rhodes, M.W.; Kator, H.; Kotob, S.; van Berkum, P.; Kaattari, I.; Vogelbein, W.; Quinn, F.; Floyd, M.M.; Butler, W.R.; Ottinger, C.A.

    2003-01-01

    Slowly growing, non-pigmented mycobacteria were isolated from striped bass (Morone saxatilis) during an epizootic of mycobacteriosis in the Chesapeake Bay. Growth characteristics, acid-fastness and results of 16S rRNA gene sequencing were consistent with those of the genus Mycobacterium. A unique profile of biochemical reactions was observed among the 21 isolates. A single cluster of eight peaks identified by analysis of mycolic acids (HPLC) resembled those of reference patterns but differed in peak elution times from profiles of reference species of the Mycobacterium tuberculosis complex. One isolate (M175T) was placed within the slowly growing mycobacteria by analysis of aligned 16S rRNA gene sequences and was proximate in phylogeny to Mycobacterium ulcerans and Mycobacterium marinum. However, distinct nucleotide differences were detected in the 16S rRNA gene sequence among M175T, M. ulcerans and M. marinum (99.2% similarity). Isolate M175T could be differentiated from other slowly growing, non-pigmented mycobacteria by its inability to grow at 37??C, production of niacin and urease, absence of nitrate reductase and resistance to isoniazid (1 ??g ml-1), thiacetazone and thiophene-2-carboxylic hydrazide. Based upon these genetic and phenotypic differences, isolate M175T (= ATCC 700981T = NCTC 13215T) is proposed as the type strain of a novel species, Mycobacterium shottsii sp. nov.

  5. Quality of Antimicrobial Products Used in Striped Catfish (Pangasianodon hypophthalmus Aquaculture in Vietnam.

    Directory of Open Access Journals (Sweden)

    Tran Minh Phu

    Full Text Available Antimicrobial usage is common in Asian aquaculture. This study aimed to determine the quality of antimicrobial products used by Vietnamese striped catfish (Pangasianodon hypophthalmus farmers. Twenty one antimicrobial products (11 products contained a single antimicrobial and 10 products contained a mixture of two different antimicrobials commonly used by catfish farmers were obtained from so-called chemical shops located in the Mekong Delta, Vietnam. Ultra High Performance Liquid Chromatography Mass Spectrometry was used to analyze concentration of sulfonamides, trimethoprim, amoxicillin, cefalexin and ciprofloxacin whereas concentrations of florfenicol and doxycycline were analyzed by High Performance Liquid Chromatography with UV detection. Results revealed that only 4/11 products with a single antimicrobial and 2/10 products with a mixture of antimicrobials contained active substances within ±10% of the concentration declared on the product label. Two products with antimicrobial mixtures did not contain any of the declared antimicrobials. Comparing two batches, analysis of 11 products revealed that only one product contained a concentration of active compound that varied with less than 10% in both batches. Several product labels provided inadequate information on how to calculate therapeutic dosage and further stated withdrawal time despite lack of pharmacokinetic data on the antimicrobials in catfish. There is an urgent need to strengthen approval procedures and in particular regularly to monitor the quality of antimicrobials used in Vietnamese aquaculture.

  6. Quality of Antimicrobial Products Used in Striped Catfish (Pangasianodon hypophthalmus) Aquaculture in Vietnam.

    Science.gov (United States)

    Phu, Tran Minh; Phuong, Nguyen Thanh; Scippo, Marie-Louise; Dalsgaard, Anders

    2015-01-01

    Antimicrobial usage is common in Asian aquaculture. This study aimed to determine the quality of antimicrobial products used by Vietnamese striped catfish (Pangasianodon hypophthalmus) farmers. Twenty one antimicrobial products (11 products contained a single antimicrobial and 10 products contained a mixture of two different antimicrobials) commonly used by catfish farmers were obtained from so-called chemical shops located in the Mekong Delta, Vietnam. Ultra High Performance Liquid Chromatography Mass Spectrometry was used to analyze concentration of sulfonamides, trimethoprim, amoxicillin, cefalexin and ciprofloxacin whereas concentrations of florfenicol and doxycycline were analyzed by High Performance Liquid Chromatography with UV detection. Results revealed that only 4/11 products with a single antimicrobial and 2/10 products with a mixture of antimicrobials contained active substances within ±10% of the concentration declared on the product label. Two products with antimicrobial mixtures did not contain any of the declared antimicrobials. Comparing two batches, analysis of 11 products revealed that only one product contained a concentration of active compound that varied with less than 10% in both batches. Several product labels provided inadequate information on how to calculate therapeutic dosage and further stated withdrawal time despite lack of pharmacokinetic data on the antimicrobials in catfish. There is an urgent need to strengthen approval procedures and in particular regularly to monitor the quality of antimicrobials used in Vietnamese aquaculture.

  7. Ornamentation, age, and survival of female striped plateau lizards, Sceloporus virgatus

    Science.gov (United States)

    Weiss, Stacey L.

    2016-04-01

    Individuals with greater expression of secondary sexual traits are often older and have higher survivorship than individuals with lower expression; if so, assessment of such indicator traits may provide genetic and/or direct benefits to potential mates. I examined the relationship between ornament expression, age, and survival in the striped plateau lizard, Sceloporus virgatus, a species with female-specific ornamentation that honestly signals reproductive quality. I followed a group of females from 2008 to 2013, examined ornament color and size as females aged, and compared ornamentation of survivors versus non-survivors. In addition, I explored whether other (non-ornamental) phenotypic characters predicted survival. I found that peak ornament expression (both color and size) of individual females changed year to year but appeared to be a weak signal of age due to high among-female variation in ornament expression that occurred independent of age and a non-linear pattern of change for ornament color. However, both absolute and relative ornament size did increase significantly as an individual aged and therefore may provide some age-related information such as reproductive investment, which is expected to increase as residual reproductive value declines with age. Individual survival was unrelated to peak ornament expression and to other phenotypic variables measured, providing no support for the ornament as a viability indicator and suggesting that individual survival prospects are affected by stochastic and environmental factors.

  8. Structure and Specificity of a Binary Tandem Domain F-Lectin from Striped Bass (Morone saxatilis)

    Energy Technology Data Exchange (ETDEWEB)

    Bianchet, M.; Odom, E; Vasta, J; Amzel, M

    2010-01-01

    The plasma of the striped bass Morone saxatilis contains a fucose-specific lectin (MsaFBP32) that consists of two F-type carbohydrate recognition domains (CRDs) in tandem. The crystal structure of the complex of MsaFBP32 with l-fucose reported here shows a cylindrical 81-A-long and 60-A-wide trimer divided into two globular halves: one containing N-terminal CRDs (N-CRDs) and the other containing C-terminal CRDs (C-CRDs). The resulting binding surfaces at the opposite ends of the cylindrical trimer have the potential to cross-link cell surface or humoral carbohydrate ligands. The N-CRDs and C-CRDs of MsaFBP32 exhibit significant structural differences, suggesting that they recognize different glycans. Analysis of the carbohydrate binding sites provides the structural basis for the observed specificity of MsaFBP32 for simple carbohydrates and suggests that the N-CRD recognizes more complex fucosylated oligosaccharides and with a relatively higher avidity than the C-CRD. Modeling of MsaFBP32 complexed with fucosylated glycans that are widely distributed in prokaryotes and eukaryotes rationalizes the observation that binary tandem CRD F-type lectins function as opsonins by cross-linking 'non-self' carbohydrate ligands and 'self' carbohydrate ligands, such as sugar structures displayed by microbial pathogens and glycans on the surface of phagocytic cells from the host.

  9. Structural transitions and hysteresis in clump- and stripe-forming systems under dynamic compression.

    Science.gov (United States)

    McDermott, Danielle; Olson Reichhardt, Cynthia J; Reichhardt, Charles

    2016-11-28

    Using numerical simulations, we study the dynamical evolution of particles interacting via competing long-range repulsion and short-range attraction in two dimensions. The particles are compressed using a time-dependent quasi-one dimensional trough potential that controls the local density, causing the system to undergo a series of structural phase transitions from a low density clump lattice to stripes, voids, and a high density uniform state. The compression proceeds via slow elastic motion that is interrupted with avalanche-like bursts of activity as the system collapses to progressively higher densities via plastic rearrangements. The plastic events vary in magnitude from small rearrangements of particles, including the formation of quadrupole-like defects, to large-scale vorticity and structural phase transitions. In the dense uniform phase, the system compresses through row reduction transitions mediated by a disorder-order process. We characterize the rearrangement events by measuring changes in the potential energy, the fraction of sixfold coordinated particles, the local density, and the velocity distribution. At high confinements, we find power law scaling of the velocity distribution during row reduction transitions. We observe hysteresis under a reversal of the compression when relatively few plastic rearrangements occur. The decompressing system exhibits distinct phase morphologies, and the phase transitions occur at lower compression forces as the system expands compared to when it is compressed.

  10. Morphometric assessment of the red stripe weevils, Rhynchophorus vulneratus (Coleoptera: Curculionidae) from several localities in Malaysia

    Science.gov (United States)

    Sazali, Siti Nurlydia; Hazmi, Izfa Riza; Rahim, Faszly; Abang, Fatimah; Jemain, Abdul Aziz

    2018-04-01

    The recognition of intraspecific variation could enhance knowledge and understanding on the population divergence that might be resulted from different geographical areas. To study the possible effect derived from different locations, a morphometric study of the red stripe weevils, Rhynchophorus vulneratus from different localities in Malaysia was conducted using field and voucher specimens. A total of twenty-three morphological characters were examined from 108 individuals of R. vulneratus representing population of Kota Samarahan, Mukah and central of Peninsular Malaysia. The data were subjected to univariate one-way single factor analysis of variance (ANOVA) and analysed in factor analysis using SPSS version 22.0 software. Univariate ANOVA showed that all tested variables were significantly different (p<0.05) except for mesocoxal distance (MSD), meanwhile from the factor analysis, the first three factors with eigenvalues greater than 1.0 were successfully extracted, resulting in a high variation of 82.687%. For factor 1, 39.213% of total variation was recorded, factor 2 accounted for 34.096% and factor 3 contributing to 9.377%, respectively. The mixed plotting among the twenty-three morphological characters suggests a strong correlation among the parameters examined and further statistical analysis should be conducted to include environmental factors such as habitat types, food availability and predation effect.

  11. RED RUNAWAYS II: LOW-MASS HILLS STARS IN SDSS STRIPE 82

    International Nuclear Information System (INIS)

    Zhang, Yanqiong; Smith, Martin C.; Carlin, Jeffrey L.

    2016-01-01

    Stars ejected from the Galactic Center can be used to place important constraints on the Milky Way potential. Since existing hypervelocity stars are too distant to accurately determine orbits, we have conducted a search for nearby candidates using full three-dimensional velocities. Since the efficacy of such studies is often hampered by deficiencies in proper motion catalogs, we have chosen to utilize the reliable, high-precision Sloan Digital Sky Survey (SDSS) Stripe 82 proper motion catalog. Although we do not find any candidates which have velocities in excess of the escape speed, we identify 226 stars on orbits that are consistent with Galactic Center ejection. This number is significantly larger than what we would expect for halo stars on radial orbits and cannot be explained by disk or bulge contamination. If we restrict ourselves to metal-rich stars, we find 29 candidates with [Fe/H] > −0.8 dex and 10 with [Fe/H] > −0.6 dex. Their metallicities are more consistent with what we expect for bulge ejecta, and so we believe these candidates are especially deserving of further study. We have supplemented this sample using our own radial velocities, developing an algorithm to use proper motions for optimizing candidate selection. This technique provides considerable improvement on the blind spectroscopic sample of SDSS, being able to identify candidates with an efficiency around 20 times better than a blind search.

  12. Red Runaways II: Low-mass Hills Stars in SDSS Stripe 82

    Science.gov (United States)

    Zhang, Yanqiong; Smith, Martin C.; Carlin, Jeffrey L.

    2016-11-01

    Stars ejected from the Galactic Center can be used to place important constraints on the Milky Way potential. Since existing hypervelocity stars are too distant to accurately determine orbits, we have conducted a search for nearby candidates using full three-dimensional velocities. Since the efficacy of such studies is often hampered by deficiencies in proper motion catalogs, we have chosen to utilize the reliable, high-precision Sloan Digital Sky Survey (SDSS) Stripe 82 proper motion catalog. Although we do not find any candidates which have velocities in excess of the escape speed, we identify 226 stars on orbits that are consistent with Galactic Center ejection. This number is significantly larger than what we would expect for halo stars on radial orbits and cannot be explained by disk or bulge contamination. If we restrict ourselves to metal-rich stars, we find 29 candidates with [Fe/H] > -0.8 dex and 10 with [Fe/H] > -0.6 dex. Their metallicities are more consistent with what we expect for bulge ejecta, and so we believe these candidates are especially deserving of further study. We have supplemented this sample using our own radial velocities, developing an algorithm to use proper motions for optimizing candidate selection. This technique provides considerable improvement on the blind spectroscopic sample of SDSS, being able to identify candidates with an efficiency around 20 times better than a blind search.

  13. What to copy: the key factor of observational learning in striped jack (Pseudocaranx dentex) juveniles.

    Science.gov (United States)

    Takahashi, K; Masuda, R; Yamashita, Y

    2014-03-01

    Animals in social environments can enhance their learning efficiency by observing the behaviour of others. Our previous study showed that learning efficiency of schooling fish increased through the observation of the behaviour of trained demonstrator conspecifics. The present study aimed to verify the key factor of observational learning by investigating what information is important for social transmission of feeding information. A striped jack (Pseudocaranx dentex) observer was provided with one of the five observation treatments: (a) pellets observation, where pellets were dropped near the aeration in an adjacent tank; (b) responding conspecific observation, where a trained conspecific demonstrator responded to the aeration without food in the adjacent tank; (c) foraging conspecific observation, where a conspecific demonstrator foraged near the aeration in the adjacent tank; (d) nearby pellets observation, where pellets were dropped in a transparent column near the aeration in the observer tank; and (e) foraging heterospecific observation, where a filefish (Stephanolepis cirrhifer) demonstrator foraged near the aeration in the adjacent tank. The response to the aeration in these observers was compared with that of controls who did not observe any behaviour. Only individuals who observed foraging conspecifics showed a response to the aeration after observing. These results suggest that observer fish acquire feeding information not through recognition of prey items or through imitation of the demonstrator, but through the vicarious reinforcement of a conspecific for foraging.

  14. Infection with Aleutian disease virus-like virus in a captive striped skunk.

    Science.gov (United States)

    Allender, Matthew C; Schumacher, Juergen; Thomas, Kathy V; McCain, Stephanie L; Ramsay, Edward C; James, Evan W; Wise, Annabel G; Maes, Roger K; Reel, Danielle

    2008-03-01

    A 5-month-old captive female striped skunk (Mephitis mephitis) was evaluated because of lethargy, signs of depression, azotemia, and erythema of the skin around the eyes. Antemortem diagnostic tests revealed renal disease but failed to identify an etiologic agent. A diagnosis of severe nonsuppurative interstitial nephritis was made on the basis of results of histologic examination of renal biopsy specimens. The skunk was administered isotonic fluids SC daily and later every other day because of the handling-related stress. Because of the skunk's deteriorating condition, it was euthanized after 24 days of supportive care. Aleutian disease was diagnosed on the basis of positive results of a PCR assay that targeted the DNA from Aleutian disease virus (ADV); positive results for ADV were also obtained by use of plasma counterimmunoelectrophoresis and an ELISA. Genetic sequencing of the 365-base pair PCR product revealed 90% sequence identity with mink ADV. In the skunk of this report, infection with a skunk-specific parvovirus resulted in clinical signs and pathologic changes similar to those associated with ADV infection in mink. For skunks with signs of renal failure, differential diagnoses should include parvovirus infection. In confirmed cases of infection with this ADV-like virus, appropriate quarantine and biosecurity measures should be in place to prevent spread to other susceptible animals within a zoological collection.

  15. Physiological adaptations to prolonged fasting in the overwintering striped skunk (Mephitis mephitis).

    Science.gov (United States)

    Mustonen, Anne-Mari; Bowman, Jeff; Sadowski, Carrie; Nituch, Larissa A; Bruce, Laura; Halonen, Toivo; Puukka, Katri; Rouvinen-Watt, Kirsti; Aho, Jari; Nieminen, Petteri

    2013-12-01

    Wintertime physiology of captive striped skunks (Mephitis mephitis) in response to cold ambient temperature (Ta) and fasting was investigated with body temperature (Tb) and activity recordings and analyses of hematology, plasma biochemistry and tissue fatty acids (FA). After 105 days of food deprivation, the skunks were in phase II of fasting indicated by the elevated plasma nonesterified FA and glycerol but no accumulation of nitrogen end products. Shorter-chain saturated and monounsaturated FA together with C18-20 n-3 polyunsaturated FA were preferentially mobilized. Individual amino acids responded to fasting in a complex manner, while essential and nonessential amino acid sums remained stable. Increases in hemoglobin and hematocrit suggested dehydration. The activity levels were lower in mid-January-early March, and the activity bouts were mostly displayed between 17:00-23:00 h. Daily torpor was observed in two females with 29 and 46 bouts. The deepest torpor (Tb<31 °C) occurred between dawn and early afternoon and lasted for 3.3 ± 0.18 h. The average minimum Tb was 29.2 ± 0.15 °C and the lowest recorded Tb was 25.8 °C. There was significant relation between the average 24-h Tb and Ta. Increases in wintertime Ta, as predicted by climate change scenarios, could influence torpor patterns in the species. © 2013.

  16. Aleutian mink disease virus in striped skunks (Mephitis mephitis): evidence for cross-species spillover.

    Science.gov (United States)

    Nituch, Larissa A; Bowman, Jeff; Wilson, Paul J; Schulte-Hostedde, Albrecht I

    2015-04-01

    Aleutian mink disease virus (AMDV) causes a parvovirus infection, initially characterized in American mink (Neovison vison), that may have harmful effects on wild populations of susceptible animals. In North America, where American mink are native, the origin, host range, and prevalence of AMDV in wild species is not clear. We studied striped skunks (Mephitis mephitis) and raccoons (Procyon lotor) to determine whether species sympatric with mink are potential reservoirs in the transmission of AMDV to wild mink and mink farms. Antibodies to AMDV were detected in 41% of skunk serum samples (143/347) and AMDV nucleic acids were detected in 32% (14/40) of skunk spleen samples by PCR, indicating that AMDV exposure and infection were frequent in skunks. We detected no AMDV antibodies in 144 raccoon blood samples. Phylogenetic analysis revealed a newly identified AMDV haplogroup consisting of isolates from Ontario skunks and a free-ranging domestic mink from Ontario. Our findings of frequent AMDV infection in skunks, close genetic similarity between skunk and mink AMDV isolates, and evidence of AMDV transmission from skunks to mink support the hypothesis that skunks may be acting as alternative hosts and reservoirs of AMDV to wild mink through cross-species virus spillover.

  17. Characterization of Stripe Rust Resistance Genes in the Wheat Cultivar Chuanmai45

    Directory of Open Access Journals (Sweden)

    Ennian Yang

    2016-04-01

    Full Text Available The objective of this research was to characterize the high level of resistance to stripe that has been observed in the released wheat cultivar, Chuanmai45. A combination of classic genetic analysis, molecular and cytogenetic methods were used to characterize resistance in an F2 population derived from Chuanmai45 and the susceptible Chuanmai42. Inheritance of resistance was shown to be conferred by two genes in Chuanmai45. Fluorescence in situ hybridization (FISH was used along with segregation studies to show that one gene was located on a 1RS.1BL translocation. Molecular markers were employed to show that the other locus was located on chromosome 4B. The defeated gene, Yr24/26, on chromosome 1BL was present in the susceptible parent and lines that recombined this gene with the 1RS.1BL translocation were identified. The germplasm, loci, and associated markers identified in this study will be useful for application in breeding programs utilizing marker-assisted selection.

  18. White striping and woody breast myopathies in the modern poultry industry: a review.

    Science.gov (United States)

    Kuttappan, V A; Hargis, B M; Owens, C M

    2016-11-01

    Myopathies are gaining the attention of poultry meat producers globally. White Striping (WS) is a condition characterized by the occurrence of white striations parallel to muscle fibers on breast, thigh, and tender muscles of broilers, while Woody Breast (WB) imparts tougher consistency to raw breast fillets. Histologically, both conditions have been characterized with myodegeneration and necrosis, fibrosis, lipidosis, and regenerative changes. The occurrence of these modern myopathies has been associated with increased growth rate in birds. The severity of the myopathies can adversely affect consumer acceptance of raw cut up parts and/or quality of further processed poultry meat products, resulting in huge economic loss to the industry. Even though gross and/or histologic characteristics of modern myopathies are similar to some of the known conditions, such as hereditary muscular dystrophy, nutritional myopathy, toxic myopathies, and marbling, WS and WB could have a different etiology. As a result, there is a need for future studies to identify markers for WS and WB in live birds and genetic, nutritional, and/or management strategies to alleviate the condition. © 2016 Poultry Science Association Inc.

  19. Quality of Antimicrobial Products Used in Striped Catfish (Pangasianodon hypophthalmus) Aquaculture in Vietnam

    Science.gov (United States)

    Phu, Tran Minh; Phuong, Nguyen Thanh; Scippo, Marie-Louise; Dalsgaard, Anders

    2015-01-01

    Antimicrobial usage is common in Asian aquaculture. This study aimed to determine the quality of antimicrobial products used by Vietnamese striped catfish (Pangasianodon hypophthalmus) farmers. Twenty one antimicrobial products (11 products contained a single antimicrobial and 10 products contained a mixture of two different antimicrobials) commonly used by catfish farmers were obtained from so-called chemical shops located in the Mekong Delta, Vietnam. Ultra High Performance Liquid Chromatography Mass Spectrometry was used to analyze concentration of sulfonamides, trimethoprim, amoxicillin, cefalexin and ciprofloxacin whereas concentrations of florfenicol and doxycycline were analyzed by High Performance Liquid Chromatography with UV detection. Results revealed that only 4/11 products with a single antimicrobial and 2/10 products with a mixture of antimicrobials contained active substances within ±10% of the concentration declared on the product label. Two products with antimicrobial mixtures did not contain any of the declared antimicrobials. Comparing two batches, analysis of 11 products revealed that only one product contained a concentration of active compound that varied with less than 10% in both batches. Several product labels provided inadequate information on how to calculate therapeutic dosage and further stated withdrawal time despite lack of pharmacokinetic data on the antimicrobials in catfish. There is an urgent need to strengthen approval procedures and in particular regularly to monitor the quality of antimicrobials used in Vietnamese aquaculture. PMID:25897517

  20. Reproductive biology of the striped goby, Gobius vittatus (Gobiidae in the northern Adriatic Sea

    Directory of Open Access Journals (Sweden)

    Marcelo Kovacic

    2007-03-01

    Full Text Available The striped goby, Gobius vittatus Vinciguerra, 1883 is a Mediterranean gobiid species considered to be rare and lacking in data on its reproduction. Sex ratio, length and age at first maturity, annual cycle of gonad development, spawning period and fecundity of G. vittatus were studied on 704 specimens collected by SCUBA diving in the northern Adriatic Sea (Kvarner area from April 2001 to March 2002. The monthly sex ratio did not differ significantly, except during the spawning season, when it was strongly biased in favour of females. The estimated length at first maturity was 32.8 and 35.4 mm for females and males, respectively. In both sexes gonad development started in the first year of life. All specimens were mature by the third year. The spawning season was from April to July. Total fecundity ranged from 560 to 3045, with an average of 1426 ± 89 ripe eggs/fish. The simultaneous presence of three clearly distinct sizes of oocytes in ripe ovaries indicate that this species is a multiple spawner.

  1. Knockdown of Cs-Spook induces delayed larval molting in rice striped stem borer Chilo suppressalis.

    Science.gov (United States)

    Shahzad, Muhammad Faisal; Li, Yao; Ge, Chang; Sun, Yang; Yang, Qiupu; Li, Fei

    2015-03-01

    Spook has essential roles in the biogenesis of the molting hormone 20-hydroxyecdysone (20-E). The function of spook in the rice striped stem borer (SSB) Chilo suppressalis remains unclear, prompting our hypothesis that it exerts actions similar to those reported for other insect species. Here we amplified the full-length transcript of spook (Cs-Spook) in SSB by 5' and 3' rapid amplification of cDNA ends. Cs-Spook has conserved P450 motifs such as Helix-C, Helix-I, Helix-K, and PERF motif (PxxFxPxRF). It was highly expressed in late instar larvae but less so in newly molted larvae. Cs-Spook was highly expressed in prothoracic glands. Cs-Spook was knocked down by dsRNA treatments. Compared with controls, the gene expression level was reduced to 9% at 24 h post injection (PI), 33% at 48 h PI, and 24% at 72 h PI. The ecdysteroid titer decreased significantly in the dsRNA-treated group (P < 0.05), resulting in delayed larval development. The delayed development in dsRNA-treatment group was rescued by treating with 20-E. Our work demonstrates that Cs-Spook participates in the biogenesis of 20-E and regulates the molt of SSB, as seen in other species. © 2014 Wiley Periodicals, Inc.

  2. Striped bass (Morone saxatilis) monitoring techniques in the Sacramento--San Joaquin Estuary

    International Nuclear Information System (INIS)

    Stevens, D.E.

    1977-01-01

    Various methods have been used to monitor the striped bass population in the Sacramento--San Joaquin Estuary. Sampling in the spring with towed plankton nets has provided an adequate description of spawning time and area, but this sampling has not adequately measured egg standing crops and larva and post-larva mortality rates. Tow-net sampling effectively measures the abundance of young in midsummer. A midwater-trawl survey is satisfactory for measuring the abundance of young in the fall but not in the winter. Techniques have not been fully evaluated for monitoring one-year-old bass. Catch-per-unit-effort data from sportfishing party boats were useful for monitoring two-year-olds, until a change in angling regulations increased recruitment age. The Petersen method and indices developed from party-boat catches are the best methods for monitoring bass that are three years old and older. Long-term trends in catch can be monitored through postcard surveys and party-boat catches

  3. Energy budget, behavior and leptin in striped hamsters subjected to food restriction and refeeding.

    Directory of Open Access Journals (Sweden)

    Zhi-Jun Zhao

    Full Text Available Food restriction induces a loss of body mass that is often followed by rapid regaining of the lost weight when the restriction ends, consequently increasing a risk of development of obesity. To determine the physiological and behavioral mechanisms underlining the regaining, striped hamsters were restricted to 85% of initial food intake for 4 weeks and refed ad libitum for another 4 weeks. Changes in body mass, energy budget, activity, body composition and serum leptin level were measured. Body mass, body fat mass and serum leptin level significantly decreased in food-restricted hamsters, and increased when the restriction ended, showing a short "compensatory growth" rather than over-weight or obesity compared with ad libitum controls. During restriction, the time spent on activity increased significantly, which was opposite to the changes in serum leptin level. Food intake increased shortly during refeeding, which perhaps contributed to the rapid regaining of body mass. No correlation was observed between serum leptin and energy intake, while negative correlations were found in hamsters that were refed for 7 and 28 days. Exogenous leptin significantly decreased the time spent on activity during food restriction and attenuated the increase in food intake during refeeding. This suggests that low leptin in restricted animals may function as a starvation signal to induce an increase in activity behavior, and high leptin likely serves as a satiety signal to prevent activity during refeeding. Leptin may play a crucial role in controlling food intake when the restriction ends, and consequently preventing overweight.

  4. Use of epidermis for the monitoring of tissular trace elements in Mediterranean striped dolphins (Stenella coeruleoalba).

    Science.gov (United States)

    Borrell, A; Clusa, M; Aguilar, A; Drago, M

    2015-03-01

    Trace elements accumulate in epidermis, liver, kidney and muscle tissues in cetaceans. However, contrarily to internal tissues, epidermis can be sampled using minimally-invasive techniques. We investigate the patterns of trace element tissue concentrations in relation to individual sex and length and the degree of inter-tissue equilibrium between epidermis and the main internal organs of the Mediterranean striped dolphin. With it, we aim to test whether epidermis is a suitable tissue to predict trace element concentrations of internal tissues in cetaceans. We focused on trace elements with high potential toxicity (mercury and cadmium) or biological significance (zinc, copper and selenium). In contrast to what was found for Cu and Zn, the concentrations of Hg, Cd and Se in epidermis were positively correlated with the levels found in the internal tissues sampled probably due to their capacity to bioaccumulate. Thus, we conclude that sampling and analysing epidermis is appropriate to monitor and predict the concentrations of Hg, Cd and Se in internal tissues but not for Cu and Zn. Copyright © 2014 Elsevier Ltd. All rights reserved.

  5. Effect of salinity on expression of branchial ion transporters in striped bass (Morone saxatilis)

    DEFF Research Database (Denmark)

    Tipsmark, Christian Kølbaek; Madsen, Steffen Søndergaard; Borski, Russell John

    2004-01-01

    The time course of osmoregulatory adjustments and expressional changes of three key ion transporters in the gill were investigated in the striped bass during salinity acclimations. In three experiments, fish were transferred from fresh water (FW) to seawater (SW), from SW to FW, and from 15-ppt...... brackish water (BW) to either FW or SW, respectively. Each transfer induced minor deflections in serum [Na+] and muscle water content, both being corrected rapidly (24 hr). Transfer from FW to SW increased gill Na+,K+-ATPase activity and Na+,K+,2Cl- co-transporter expression after 3 days. Abundance of Na......+,K+-ATPase alpha-subunit mRNA and protein was unchanged. Changes in Na+,K+,2Cl- co-transporter protein were preceded by increased mRNA expression after 24 hr. Expression of V-type H+-ATPase mRNA decreased after 3 days. Transfer from SW to FW induced no change in expression of gill Na+,K+-ATPase. However, Na+,K+,2...

  6. Dynamic problem for two-layered stripe on the rigid basis

    Directory of Open Access Journals (Sweden)

    Yuriy P. Glukhov

    2014-12-01

    Full Text Available The intermediate results of the study of planar problems about perturbation by movable surface load of multilayer base with initial (residual stresses are presented. Within the bounds of linearizired theory of elasticity for bodies with initial stresses there are considered the statement and method of solving a planar problem of the perturbation of the surface load moving with a constant speed of two-layered pre-stressed stripe with the rigid basis. The model of the layered medium “a plate and pre-stressed layer” is considered. Equations of plate motion are written taking into account the shift and rotary inertia. Layer material is assumed compressible, isotropic in the natural state. The form of elastic potential has a general form and must be specified only while implementation of numeral calculations. With the help of the Fourier integral transform method a fundamental solution to the problem is obtained in general form under various conditions of contact and speeds of load.

  7. Concentrations of mercury in tissues of striped dolphins suggest decline of pollution in Mediterranean open waters.

    Science.gov (United States)

    Borrell, A; Aguilar, A; Tornero, V; Drago, M

    2014-07-01

    The Mediterranean is a semi-enclosed sea subject to high mercury (Hg) pollution from both natural and anthropogenic sources. With the objective of discerning temporal changes in marine Hg pollution in the oceanic waters of the northwestern Mediterranean Sea, we analysed liver and kidney from striped dolphins (Stenella coeruleoalba) collected during 2007-2009 and compared them with previous results from a similar sample from 1990-1993. The effect of body length and sex on tissue Hg concentrations was investigated to ensure an unbiased comparison between the periods. The Hg concentrations did not show significant sex-related differences in any tissue or period but were correlated positively with body length. Using body length as a covariate, Hg concentrations in liver and kidney were higher in 1990-1993 than in 2007-2009. This result suggests that measures to reduce emissions in Western European countries have been effective in reducing mercury pollution in Mediterranean open waters. Copyright © 2014 Elsevier Ltd. All rights reserved.

  8. Photosynthetic Characteristics of Flag Leaves in Rice White Stripe Mutant 6001 During Senescence Process

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    Xiao-hui ZHEN

    2014-11-01

    Full Text Available Physiological, biochemical and electron microscopy analyses were used to investigate the photosynthetic performance of flag leaves in rice white stripe mutant 6001 during the senescence process. Results showed that the chlorophyll content at the heading and milk-ripe stages in rice mutant 6001 were about 34.78% and 3.00% less than those in wild type 6028, respectively. However, the chlorophyll content at the fully-ripe stage in rice mutant 6001 was higher than that in wild type 6028. At the heading stage, the net photosynthetic rate (Pn in rice mutant 6001 was lower than that in wild type 6028. Rice mutant 6001 also exhibited a significantly slower decrease rate of Pn than wild type 6028 during the senescence progress, especially at the later stage. Furthermore, Ca2+-ATPase, Mg2+-ATPase and photophosphorylation activities exhibited the similar trends as the Pn. During the senescence process, the 68 kDa polypeptide concentrations in the thylakoid membrane proteins exhibited a significant change, which was one of the critical factors that contributed to the observed change in photosynthesis. We also observed that the chloroplasts of rice mutant 6001 exhibited higher integrity than those of wild type 6028, and the chloroplast membrane of rice mutant 6001 disintegrated more slow during the senescence process. In general, rice mutant 6001 had a relatively slower senescence rate than wild type 6028, and exhibited anti-senescence properties.

  9. The beetle Tribolium castaneum has a fushi tarazu homolog expressed in stripes during segmentation

    Science.gov (United States)

    Brown, S. J.; Hilgenfeld, R. B.; Denell, R. E.; Spooner, B. S. (Principal Investigator)

    1994-01-01

    The genetic control of embryonic organization is far better understood for the fruit fly Drosophila melanogaster than for any other metazoan. A gene hierarchy acts during oogenesis and embryogenesis to regulate the establishment of segmentation along the anterior-posterior axis, and homeotic selector genes define developmental commitments within each parasegmental unit delineated. One of the most intensively studied Drosophila segmentation genes is fushi tarazu (ftz), a pair-rule gene expressed in stripes that is important for the establishment of the parasegmental boundaries. Although ftz is flanked by homeotic selector genes conserved throughout the metazoa, there is no evidence that it was part of the ancestral homeotic complex, and it has been unclear when the gene arose and acquired a role in segmentation. We show here that the beetle Tribolium castaneum has a ftz homolog located in its Homeotic complex and expressed in a pair-rule fashion, albeit in a register differing from that of the fly gene. These and other observations demonstrate that a ftz gene preexisted the radiation of holometabolous insects and suggest that it has a role in beetle embryogenesis which differs somewhat from that described in flies.

  10. Responses of striped stem borer, Chilo suppressalis (Lepidoptera: Pyralidae), from Taiwan to a range of insecticides.

    Science.gov (United States)

    Cheng, Xuan; Chang, Cheng; Dai, Shu-Mei

    2010-07-01

    Information on the insecticide susceptibility of striped stem borer, Chilo suppressalis (Walker), is essential for an effective pest management programme. An early detection of resistance development can prompt the modification of current control methods and increase the lifespan of insecticides through the rotation of chemicals with different modes of action. In this study, the susceptibility of this pest in Taiwan to four classes of insecticides has been examined. Over 1000-fold resistance to carbofuran was detected in C. suppressalis collected from Chiayi and Changhua prefectures, with estimated LC(50) values of > 3 mg cm(-2). In addition, 61-fold resistance to cartap was found in the Chiayi population. On the other hand, all tested populations of rice stem borer were still relatively susceptible to chlorpyrifos, fipronil and permethrin, with LC(50) values ranging from 30 to 553 ng cm(-2). Chilo suppressalis populations collected from the central parts of Taiwan have a higher degree of resistance to the tested insecticides than those from northern areas. The occurrence of high resistance to carbofuran in the Chiayi and Changhua areas suggests that this compound should be replaced with chemicals having a different mode of action, such as chlorpyrifos, fipronil and permethrin, to which low cross-resistance has been detected. Copyright (c) 2010 Society of Chemical Industry.

  11. Temperature-dependent striped antiferromagnetism of LaFeAsO in a Green's function approach

    International Nuclear Information System (INIS)

    Liu Guibin; Liu Banggui

    2009-01-01

    We use a Green's function method to study the temperature-dependent average moment and magnetic phase-transition temperature of the striped antiferromagnetism of LaFeAsO, and other similar compounds, as the parents of FeAs-based superconductors. We consider the nearest and the next-nearest couplings in the FeAs layer, and the nearest coupling for inter-layer spin interaction. The dependence of the transition temperature T N and the zero-temperature average spin on the interaction constants is investigated. We obtain an analytical expression for T N and determine our temperature-dependent average spin from zero temperature to T N in terms of unified self-consistent equations. For LaFeAsO, we obtain a reasonable estimation of the coupling interactions with the experimental transition temperature T N = 138 K. Our results also show that a non-zero antiferromagnetic (AFM) inter-layer coupling is essential for the existence of a non-zero T N , and the many-body AFM fluctuations reduce substantially the low-temperature magnetic moment per Fe towards the experimental value. Our Green's function approach can be used for other FeAs-based parent compounds and these results should be useful to understand the physical properties of FeAs-based superconductors.

  12. Mapping of stripe rust resistance gene in an Aegilops caudate introgression line in wheat and its genetic association with leaf rust resistance.

    Science.gov (United States)

    Toor, Puneet Inder; Kaur, Satinder; Bansal, Mitaly; Yadav, Bharat; Chhuneja, Parveen

    2016-12-01

    A pair of stripe rust and leaf rust resistance genes was introgressed from Aegilops caudata, a nonprogenitor diploid species with the CC genome, to cultivated wheat. Inheritance and genetic mapping of stripe rust resistance gene in backcrossrecombinant inbred line (BC-RIL) population derived from the cross of a wheat-Ae. caudata introgression line (IL) T291- 2(pau16060) with wheat cv. PBW343 is reported here. Segregation of BC-RILs for stripe rust resistance depicted a single major gene conditioning adult plant resistance (APR) with stripe rust reaction varying from TR-20MS in resistant RILs signifying the presence of some minor genes as well. Genetic association with leaf rust resistance revealed that two genes are located at a recombination distance of 13%. IL T291-2 had earlier been reported to carry introgressions on wheat chromosomes 2D, 3D, 4D, 5D, 6D and 7D. Genetic mapping indicated the introgression of stripe rust resistance gene on wheat chromosome 5DS in the region carrying leaf rust resistance gene LrAc, but as an independent introgression. Simple sequence repeat (SSR) and sequence-tagged site (STS) markers designed from the survey sequence data of 5DS enriched the target region harbouring stripe and leaf rust resistance genes. Stripe rust resistance locus, temporarily designated as YrAc, mapped at the distal most end of 5DS linked with a group of four colocated SSRs and two resistance gene analogue (RGA)-STS markers at a distance of 5.3 cM. LrAc mapped at a distance of 9.0 cM from the YrAc and at 2.8 cM from RGA-STS marker Ta5DS_2737450, YrAc and LrAc appear to be the candidate genes for marker-assisted enrichment of the wheat gene pool for rust resistance.

  13. 2D Relativistic MHD simulations of the Kruskal-Schwarzschild instability in a relativistic striped wind

    Science.gov (United States)

    Gill, Ramandeep; Granot, Jonathan; Lyubarsky, Yuri

    2018-03-01

    We study the linear and non-linear development of the Kruskal-Schwarzchild instability in a relativisitically expanding striped wind. This instability is the generalization of Rayleigh-Taylor instability in the presence of a magnetic field. It has been suggested to produce a self-sustained acceleration mechanism in strongly magnetized outflows found in active galactic nuclei, gamma-ray bursts, and micro-quasars. The instability leads to magnetic reconnection, but in contrast with steady-state Sweet-Parker reconnection, the dissipation rate is not limited by the current layer's small aspect ratio. We performed two-dimensional (2D) relativistic magnetohydrodynamic (RMHD) simulations featuring two cold and highly magnetized (1 ≤ σ ≤ 103) plasma layers with an anti-parallel magnetic field separated by a thin layer of relativistically hot plasma with a local effective gravity induced by the outflow's acceleration. Our simulations show how the heavier relativistically hot plasma in the reconnecting layer drips out and allows oppositely oriented magnetic field lines to reconnect. The instability's growth rate in the linear regime matches the predictions of linear stability analysis. We find turbulence rather than an ordered bulk flow near the reconnection region, with turbulent velocities up to ˜0.1c, largely independent of model parameters. However, the magnetic energy dissipation rate is found to be much slower, corresponding to an effective ordered bulk velocity inflow into the reconnection region vin = βinc of 10-3 ≲ βin ≲ 5 × 10-3. This occurs due to the slow evacuation of hot plasma from the current layer, largely because of the Kelvin-Helmholtz instability experienced by the dripping plasma. 3D RMHD simulations are needed to further investigate the non-linear regime.

  14. A plausible (overlooked) super-luminous supernova in the Sloan digital sky survey stripe 82 data

    International Nuclear Information System (INIS)

    Kostrzewa-Rutkowska, Zuzanna; Kozłowski, Szymon; Wyrzykowski, Łukasz; Djorgovski, S. George; Mahabal, Ashish A.; Glikman, Eilat; Koposov, Sergey

    2013-01-01

    We present the discovery of a plausible super-luminous supernova (SLSN), found in the archival data of Sloan Digital Sky Survey (SDSS) Stripe 82, called PSN 000123+000504. The supernova (SN) peaked at m g < 19.4 mag in the second half of 2005 September, but was missed by the real-time SN hunt. The observed part of the light curve (17 epochs) showed that the rise to the maximum took over 30 days, while the decline time lasted at least 70 days (observed frame), closely resembling other SLSNe of SN 2007bi type. The spectrum of the host galaxy reveals a redshift of z = 0.281 and the distance modulus of μ = 40.77 mag. Combining this information with the SDSS photometry, we found the host galaxy to be an LMC-like irregular dwarf galaxy with an absolute magnitude of M B = –18.2 ± 0.2 mag and an oxygen abundance of 12+log [O/H]=8.3±0.2; hence, the SN peaked at M g < –21.3 mag. Our SLSN follows the relation for the most energetic/super-luminous SNe exploding in low-metallicity environments, but we found no clear evidence for SLSNe to explode in low-luminosity (dwarf) galaxies only. The available information on the PSN 000123+000504 light curve suggests the magnetar-powered model as a likely scenario of this event. This SLSN is a new addition to a quickly growing family of super-luminous SNe.

  15. Sequencing and characterization of striped venus transcriptome expand resources for clam fishery genetics.

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    Alessandro Coppe

    Full Text Available BACKGROUND: The striped venus Chamelea gallina clam fishery is among the oldest and the largest in the Mediterranean Sea, particularly in the inshore waters of northern Adriatic Sea. The high fishing pressure has lead to a strong stock abundance decline, enhanced by several irregular mortality events. The nearly complete lack of molecular characterization limits the available genetic resources for C. gallina. We achieved the first transcriptome of this species with the aim of identifying an informative set of expressed genes, potential markers to assess genetic structure of natural populations and molecular resources for pathogenic contamination detection. METHODOLOGY/PRINCIPAL FINDINGS: The 454-pyrosequencing of a normalized cDNA library of a pool C. gallina adult individuals yielded 298,494 raw reads. Different steps of reads assembly and filtering produced 36,422 contigs of high quality, one half of which (18,196 were annotated by similarity. A total of 111 microsatellites and 20,377 putative SNPs were identified. A panel of 13 polymorphic transcript-linked microsatellites was developed and their variability assessed in 12 individuals. Remarkably, a scan to search for contamination sequences of infectious origin indicated the presence of several Vibrionales species reported to be among the most frequent clam pathogen's species. Results reported in this study were included in a dedicated database available at http://compgen.bio.unipd.it/chameleabase. CONCLUSIONS/SIGNIFICANCE: This study represents the first attempt to sequence and de novo annotate the transcriptome of the clam C. gallina. The availability of this transcriptome opens new perspectives in the study of biochemical and physiological role of gene products and their responses to large and small-scale environmental stress in C. gallina, with high throughput experiments such as custom microarray or targeted re-sequencing. Molecular markers, such as the already optimized EST

  16. Geometrically frustrated Cairo pentagonal lattice stripe with Ising and Heisenberg exchange interactions

    Science.gov (United States)

    Rodrigues, F. C.; de Souza, S. M.; Rojas, Onofre

    2017-04-01

    Motivated by the recent discoveries of some compounds such as the Bi2Fe4O9 which crystallizes in an orthorhombic crystal structure with the Fe3+ ions, and iron-based oxyfluoride Bi4Fe5O13 F compounds following the pattern of Cairo pentagonal structure, among some other compounds. We propose a model for one stripe of the Cairo pentagonal Ising-Heisenberg lattice, one of the edges of a pentagon is different, and this edge will be associated with a Heisenberg exchange interaction, while the Ising exchange interactions will associate the other edges. We study the phase transition at zero temperature, illustrating five phases: a ferromagnetic phase (FM), a dimer antiferromagnetic (DAF), a plaquette antiferromagnetic (PAF), a typical antiferromagnetic (AFM) and a peculiar frustrated phase (FRU) where two types of frustrated states with the same energy coexist. To obtain the partition function of this model, we use the transfer matrix approach and following the eight vertex model notation. Using this result we discuss the specific heat, internal energy and entropy as a function of the temperature, and we can observe some unexpected behavior in the low-temperature limit, such as anomalous double peak in specific heat due to the existence of three phase (FRU, PAF(AFM) and FM) transitions occurring in a close region to each other. Consequently, the low-lying energy thermal excitation generates this double anomalous peak, and we also discuss the internal energy at the low temperature limit, where this double peak curve occurs. Some properties of our result were compared with two dimensional Cairo pentagonal lattices, as well as orthogonal dimer plaquette Ising-Heisenberg chain.

  17. The Stripe 82 Massive Galaxy Project. III. A Lack of Growth among Massive Galaxies

    Science.gov (United States)

    Bundy, Kevin; Leauthaud, Alexie; Saito, Shun; Maraston, Claudia; Wake, David A.; Thomas, Daniel

    2017-12-01

    The average stellar mass (M *) of high-mass galaxies ({log}{M}* /{M}⊙ > 11.5) is expected to grow by ˜30% since z˜ 1, largely through ongoing mergers that are also invoked to explain the observed increase in galaxy sizes. Direct evidence for the corresponding growth in stellar mass has been elusive, however, in part because the volumes sampled by previous redshift surveys have been too small to yield reliable statistics. In this work, we make use of the Stripe 82 Massive Galaxy Catalog (S82-MGC) to build a mass-limited sample of 41,770 galaxies ({log}{M}* /{M}⊙ > 11.2) with optical-to-near-IR photometry and a large fraction (>55%) of spectroscopic redshifts. Our sample spans 139 deg2, significantly larger than most previous efforts. After accounting for a number of potential systematic errors, including the effects of M * scatter, we measure galaxy stellar mass functions over 0.3history assumed for M * estimates, although our inability to characterize low-surface-brightness outskirts may be the most important limitation of our study. Even among these high-mass galaxies, we find evidence for differential evolution when splitting the sample by recent SF activity. While low-SF systems appear to become completely passive, we find a mostly subdominant population of galaxies with residual, but low rates of SF (˜1 M ⊙ yr-1) whose number density does not evolve. Interestingly, these galaxies become more prominent at higher M *, representing ˜10% of all galaxies at {10}12 {M}⊙ and perhaps dominating at even larger masses.

  18. RNA-seq analysis of Brachypodium distachyon responses to Barley stripe mosaic virus infection

    Directory of Open Access Journals (Sweden)

    Guoxin Wang

    2017-02-01

    Full Text Available Barley stripe mosaic virus (BSMV is the type member of the genus Hordeivirus. Brachypodium distachyon line Bd3-1 shows resistance to the BSMV ND18 strain, but is susceptible to an ND18 double mutant (β NDTGB1R390K, T392K in which lysine is substituted for an arginine at position 390 and for threonine at position 392 of the triple gene block 1 (TGB1 protein. In order to understand differences in gene expression following infection with ND18 and double mutant ND18, Bd3-1 seedlings were subjected to RNA-seq analyses at 1, 6, and 14 days post inoculation (dpi. The results revealed that basal immunity genes involved in cellulose synthesis and pathogenesis-related protein biosynthesis were enhanced in incompatible interactions between Bd3-1 and ND18. Most of the differentially expressed transcripts are related to trehalose biosynthesis, ethylene, jasmonic acid metabolism, protein phosphorylation, protein ubiquitination, transcriptional regulation, and transport process, as well as pathogenesis-related protein biosynthesis. In compatible interactions between Bd3-1 and ND18 mutant, Bd3-1 developed weak basal resistance responses to the virus. Many genes involved in cellulose biosynthesis, protein amino acid phosphorylation, protein biosynthesis, protein glycosylation, glycolysis and cellular macromolecular complex assembly that may be related to virus replication, assembly and movement were up-regulated. Some genes involved in oxidative stress responses were also up-regulated at 14 dpi. BSMV ND18 mutant infection suppressed expression of genes functioning in regulation of transcription, protein kinase, cellular nitrogen compound biosynthetic process and photosynthesis. Differential expression patterns between compatible and incompatible interactions in Bd3-1 to the two BSMV strains provide important clues for understanding mechanism of resistance to BMSV in the model plant Brachypodium.

  19. Characterization of non-host resistance in broad bean to the wheat stripe rust pathogen

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    Cheng Yulin

    2012-06-01

    Full Text Available Abstract Background Non-host resistance (NHR confers plant species immunity against the majority of microbial pathogens and represents the most robust and durable form of plant resistance in nature. As one of the main genera of rust fungi with economic and biological importance, Puccinia infects almost all cereals but is unable to cause diseases on legumes. Little is known about the mechanism of this kind of effective defense in legumes to these non-host pathogens. Results In this study, the basis of NHR in broad bean (Vicia faba L. against the wheat stripe rust pathogen, Puccinia striiformis f. sp. tritici (Pst, was characterized. No visible symptoms were observed on broad bean leaves inoculated with Pst. Microscopic observations showed that successful location of stomata and haustoria formation were significantly reduced in Pst infection of broad bean. Attempted infection induced the formation of papillae, cell wall thickening, production of reactive oxygen species, callose deposition and accumulation of phenolic compounds in plant cell walls. The few Pst haustoria that did form in broad bean cells were encased in reactive oxygen and callose materials and those cells elicited cell death. Furthermore, a total of seven defense-related genes were identified and found to be up-regulated during the Pst infection. Conclusions The results indicate that NHR in broad bean against Pst results from a continuum of layered defenses, including basic incompatibility, structural and chemical strengthening of cell wall, posthaustorial hypersensitive response and induction of several defense-related genes, demonstrating the multi-layered feature of NHR. This work also provides useful information for further determination of resistance mechanisms in broad bean to rust fungi, especially the adapted important broad bean rust pathogen, Uromyces viciae-fabae, because of strong similarity and association between NHR of plants to unadapted pathogens and basal

  20. Molecular cytogenetic characterization and stripe rust response of a trigeneric hybrid involving Triticum, Psathyrostachys, and Thinopyrum.

    Science.gov (United States)

    Kang, Houyang; Zeng, Jian; Xie, Quan; Tao, Shan; Zhong, Meiyu; Zhang, Haiqin; Fan, Xing; Sha, Lina; Xu, Lili; Zhou, Yonghong

    2012-05-01

    Trigeneric hybrids offer opportunities to transfer alien traits into cultivated wheat. In this study, a new trigeneric hybrid involving species of Triticum, Psathyrostachys, and Thinopyrum was synthesized by crossing Triticum aestivum L. (wheat)--Thinopyrum intermedium (Host) Barkworth & D.R. Dewey amphiploid Zhong 3 with wheat--Psathyrostachys huashanica Keng ex Kuo amphiploid PHW-SA. Crossability of the two amphiploids was 19.74%, and the fertility of the hybrid was 16.20%. The mean meiotic configuration of the trigeneric hybrid (2n=56) was 13.06 I+17.24 IIring+3.73 IIrod+0.28 III+0.04 IV. GISH analysis indicated that the trigeneric F1 had seven P. huashanica chromosomes and seven Th. intermedium chromosomes. The mean chromosome numbers of F2, F3, and F4 progenies were 2n=49.24, 2n=48.13, and 2n=46.78, respectively, a gradual decrease. GISH analysis revealed that most F2 and F3 plants had 2–10 Th. intermedium chromosomes and 0–4 P. huashanica chromosomes. In the F4 progenies, 1–7 Th. intermedium chromosomes were labeled, but no P. huashanica chromosomes were detected. It seems that Th. intermedium chromosomes are more likely than P. huashanica chromosomes to be transmitted to the progenies. The stripe rust response of PHW-SA was expressed in the F1 and some F2 and F3 progenies. The trigeneric hybrid could be a useful bridge for transfering P. huashanica and Th. intermedium chromosomes to common wheat.

  1. Grapevine leaf stripe disease symptoms (esca complex are reduced by a nutrients and seaweed mixture

    Directory of Open Access Journals (Sweden)

    Francesco CALZARANO

    2015-01-01

    Full Text Available Grapevine leaf stripe disease (GLSD seriously reduces the quality and quantity of grape production, and results in a shorter lifespan of vineyards. Recent research has shown that foliar applications of nutrients influence the development of GLSD foliar symptoms. Based on this knowledge the effect of foliar applications of a mixture of calcium chloride, magnesium nitrate and Fucales seaweed extract on the development of leaf symptoms was evaluated over a 3-year period from 2010 to 2012. Nine foliar applications of the full mixture and its individual mineral components, also in different combinations, were tested in three different vineyards, one of cv. Trebbiano d’Abruzzo and two of cv. Montepulciano d’Abruzzo in the Teramo province (Abruzzo, Italy. Treatments were applied every 10 days from the beginning of vegetative growth to pre-bunch closure. The final results were similar in all the three vineyards and in the three years leading to a significant reduction of symptom development in the vines treated with the full mixture, while lower effects were obtained by applying partial combinations or single components. Both quantity and quality of grapes from the treated vines increased, while no phytotoxic or other unwanted effects on grape growth were detected. Vines treated with the full mixture showed an increase in trans-resveratrol and flavonoids content, and a higher accumulation of calcium oxalate in crystal druses in the leaf mesophyll. These data can be a useful base to set up a control strategy against GLSD and give some input for better understanding the mechanisms involved in foliar symptom expression in GLSD.

  2. Full genetic characterization and epidemiology of a novel amdoparvovirus in striped skunk (Mephitis mephitis).

    Science.gov (United States)

    Canuti, Marta; Doyle, Hillary E; P Britton, Ann; Lang, Andrew S

    2017-05-10

    Amdoparvovirus is a newly defined parvoviral genus that contains four species (Carnivore amdoparvovirus 1-4), including the well-known Aleutian mink disease virus (AMDV). Amdoparvoviruses cause an immune-associated and often lethal wasting syndrome in Mustelidae and Caninae hosts. In this study, we molecularly investigated amdoparvoviruses detected in 44 striped skunks (Mephitis mephitis) found dead in and around Vancouver, British Columbia, Canada. Some of the animals exhibited pathological changes compatible with amdoparvovirus-associated disease. The nearly complete genomic sequence was obtained for seven different strains and our analyses show how this virus, which we named skunk amdoparvovirus (SKAV), should be classified as a separate species within the genus (proposed Carnivore amdoparvovirus 5). We detected co-infections, recombinant genomes, at least three separate viral lineages, and preliminary evidence for geographic segregation of lineages. Furthermore, we proved that similar viruses, only partially characterized in previous studies and labeled as AMDV, circulate in skunks from other distant areas of North America (Ontario and California) and found evidence for spillover events in mink (Neovison vison). Although SKAVs are capable of causing disease in infected animals, a high proportion of sub-clinical infections has been observed, suggesting these animals might act as asymptomatic carriers and pose a threat to wild and captive carnivores. Finally, we highlight the need for more specific diagnostic tests and further molecular investigations to clarify the epidemiology and host- and geographical distributions of amdoparvoviruses in terrestrial carnivores, especially because the whole spectrum of viral diversity in this group is likely still unknown.

  3. Circular stripes were more common in Barrett's esophagus after acetic acid staining.

    Science.gov (United States)

    Sun, Yating; Ma, Shiyang; Fang, Li; Wang, Jinhai; Dong, Lei

    2018-01-25

    The diagnosis of Barrett's esophagus (BE) is disturbed by numerous factors, including correct gastroesophageal junction judgment, the initial location of the Z-line and the biopsy result above it. The acetic acid (AA) could help to diagnose BE better than high resolution imaging technology or magnifying endoscopy, by providing enhanced contrast of different epithelium. We have noticed AA could produce multiple white circular lines, forming circular stripes (CS), at lower esophagus, which hasn't been reported by others. This study aimed to investigate whether the CS is a special marker in BE patients. A total of 47 BE patients and 63 healthy people were enrolled from March 2016 to October 2016, and 2% AA staining had been operated routinely at lower esophagus under high resolution gastroscopy. We observed whether there were CS after AA staining and the images were compared between the two groups. CS were confirmed in 42 patients (89.36%) in the BE group and 5 (7.94) in the control group ((χ 2  = 72.931, P < 0.001)). The average width of CS was 0.76 ± 0.25 cm in BE group, which was similar to that in the control group (0.88 ± 0.11 cm). Villous or punctate or reticular pattern usually existed above or below the CS. CS could be found at lower esophagus in most BE patients with AA staining, and this special feature might be valuable in diagnosing, evaluating and following up of BE patients.

  4. Evaluation of White Striping prevalence and predisposing factors in broilers at slaughter.

    Science.gov (United States)

    Russo, Elisa; Drigo, Michele; Longoni, Corrado; Pezzotti, Raffaele; Fasoli, Paolo; Recordati, Camilla

    2015-08-01

    White striping ( WS: ) is an alteration of breast and thigh muscles of broiler chickens characterized by the presence of white striations parallel to the direction of muscle fibers. This study was performed to evaluate the prevalence and the predisposing factors to WS in commercial broilers of different weight reared in northern Italy. Fifty seven broiler flocks, including animals of medium- and heavy-weight, were grossly evaluated at slaughter for the presence of WS. For each flock, breeding data (mean BW at slaughter, ADG, sex, color of skin and fat, genetic line, age, antibiotic treatment, and prevalence of deep pectoral myopathy) were collected and statistically analyzed to assess their correlation with WS. Histology of breast fillets affected by different grades of WS was performed to evaluate potential differences between medium- and heavy-weight broilers. The overall prevalence of WS in medium- and heavy-weight broilers (mean BW 2.59 ± 0.13 kg and 3.64 ± 0.34 kg, respectively) was 70.2 ± 7.9% and 82.51 ± 8.5%, respectively, while the percentage of severe WS was 13.3 ± 7.1% and 25.7 ± 12.8%, respectively. A strong correlation was found between presence of WS, BW at slaughter, and ADG (Pearson correlation = 0.69, P myopathy (Spearman's Rho slaughterhouse 1 = 0.74, Spearman's Rho slaughterhouse 2 = 0.51, P myopathy, and that the lesions, as expected, were more severe in heavy-weight broilers. In conclusion, WS is a major concern in commercial meat poultry reared in Italy, affecting more severely heavier broilers, and it is mainly related to the BW and ADG of animals. © 2015 Poultry Science Association Inc.

  5. Sex Differences in Defensive Behavior and Venom of The Striped Bark Scorpion Centruroides vittatus (Scorpiones: Buthidae).

    Science.gov (United States)

    Miller, D W; Jones, A D; Goldston, J S; Rowe, M P; Rowe, A H

    2016-11-01

    Studies of venom variability have advanced from describing the mechanisms of action and relative potency of medically important toxins to understanding the ecological and evolutionary causes of the variability itself. While most studies have focused on differences in venoms among taxa, populations, or age-classes, there may be intersexual effects as well. Striped bark scorpions (Centruroides vittatus) provide a good model for examining sex differences in venom composition and efficacy, as this species exhibits dramatic sexual dimorphism in both size and defensive behavior; when threatened by an enemy, larger, slower females stand and fight while smaller, fleeter males prefer to run. We here add evidence suggesting that male and female C. vittatus indeed have different defensive propensities; when threatened via an electrical stimulus, females were more likely to sting than were males. We reasoned that intersexual differences in defensive phenotypes would select for venoms with different functions in the two sexes; female venoms should be effective at predator deterrence, whereas male venoms, less utilized defensively, might be better suited to capturing prey or courting females. This rationale led to our predictions that females would inject more venom and/or possess more painful venom than males. We were wrong. While females do inject more venom than males in a defensive sting, females are also larger; when adjusted for body size, male and female C. vittatus commit equal masses of venom in a sting to a potential enemy. Additionally, house mice (Mus musculus) find an injection of male venom more irritating than an equal amount of female venom, likely because male venom contains more of the toxins that induce pain. Taken together, our results suggest that identifying the ultimate causes of venom variability will, as we move beyond adaptive storytelling, be hard-won. © The Author 2016. Published by Oxford University Press on behalf of the Society for Integrative and

  6. Staying put or leaving home: endocrine, neuroendocrine and behavioral consequences in male African striped mice.

    Science.gov (United States)

    Schradin, Carsten; Kenkel, Wiliam; Krackow, Sven; Carter, C Sue

    2013-01-01

    Social flexibility occurs when individuals of both sexes can change their social and reproductive tactics, which in turn can influence the social system of an entire population. However, little is known regarding the extent to which individuals of socially flexible species vary in their social behavior and in the underlying physiological mechanisms that support different social tactics. The present study in African striped mice modeled in captivity three male tactics described from the field: (a) philopatric males remaining in the family; (b) solitary roamers; or (c) group-living breeding males. Sixteen pairs and their offspring were kept in captivity, while one male offspring from the family remained as singly housed after he reached 21 days of age. Differences in behavior, morphology, hormone and neuropeptide levels were tested, and physiological measurements were correlated with behavioral measurements. In standardized arena experiments group-living males (philopatrics and breeders) were significantly more aggressive than singly housed males, in agreement with previous data suggesting that group-living, but not roaming males, are territorial. Philopatric males showed signs of reproductive suppression, small testes, lower testosterone and higher corticosterone levels than their singly housed brothers. Higher levels of arginine vasopressin (AVP) were measured in the PVN and BNST of singly housed males compared to group-living males. Based on these findings we hypothesize that roamers are physiologically primed, and capable, if the opportunity to mate arises, to release AVP, form social bonds and become territorial, thus quickly adopting the tactic as breeding male which would yield a higher reproductive success. Copyright © 2012 Elsevier Inc. All rights reserved.

  7. Incidence and distribution of leek yellow stripe virus in allium crops in Serbia

    Directory of Open Access Journals (Sweden)

    Vučurović Ivan

    2017-01-01

    Full Text Available Leek yellow stripe virus (LYSV is one of the most frequent and important viruses in leek and garlic crops worldwide. In Serbia this virus is found both in leek and garlic, and often at high percentages. During two consecutive years, 2012 and 2013, a total 92 samples were collected from 11 inspected leek-, garlic- and onion-growing locations and they were analyzed for the presence of LYSV using DAS-ELISA. LYSV was detected in 31.5% of the tested samples. In 2012, the presence of LYSV was only detected in leek plants, and in 55.6% of the tested samples. During 2013, LYSV was detected in 85% of leek and 58.3% of garlic samples. In total, LYSV was detected in 56.4% of leek samples and 17.1% garlic samples. LYSV incidence was confirmed using RT-PCR with LYSV specific primers amplifying 1020 bp fragment representing coat protein and part of nuclear inclusion B genes. Molecular identification was confirmed by sequencing of two selected isolates, 181-13 (MG242625 from garlic and 298-13 (MG242624 from leek, and comparing them to the GenBank sequences of LYSV. Phylogenetic analysis of 55 sequences of LYSV from all over the world showed some correlation between host plant and geographical origin of the isolates, forming five separate clades. Two Serbian LYSV isolates fell into distant clades. The Serbian leek isolate 298-13 of LYSV belongs to clade B, while isolate 181-13 originating from garlic belongs in clade E.

  8. Lion - tiger - stripes: Neural correlates of indirect semantic priming across processing modalities.

    Science.gov (United States)

    Sass, Katharina; Krach, Sören; Sachs, Olga; Kircher, Tilo

    2009-03-01

    "Lions" do not have "stripes". However, via the word "tiger" both words are closely connected within the semantic network. With the present study we pursued two goals: to detect neural correlates of (1) directly and indirectly related word pairs by means of priming, and (2) to assess the effect of presentation modality. Stimuli were presented with a short SOA of 350 ms as subjects performed a lexical decision task during fMRI measurement. Four experimental conditions were compared: directly related (picture-frame), indirectly related (anvil-nail), unrelated (steamboat-needle) and nonword trials (chalk-edan), presented in a uni- (word-word) and cross-modal (auditory-word) version. Behavioral data revealed a modality-independent priming effect only for direct semantic priming. On a neural level, directly linked words led to left-lateralized activations in fronto-temporo-parietal areas. Indirect priming led to right-hemispheric fronto-parietal signal changes. Common areas of activation for uni- and cross-modal priming were found within the left middle temporal gyrus and right precuneus for direct priming and within the right insula for indirect priming. The comparison of the semantic distances (direct>indirect) showed one region activated modality-independent: the precuneus. Direct priming is associated with activation clusters corresponding to a large left-lateralized network. Indirect priming recruits right-hemispheric regions, reflecting widespread semantic fields and attentional components. The modality-independent comparison of direct and indirect priming revealed common areas of activation supporting an amodal rather than multiple semantic systems. The activation related to semantic distances underpins the special role of the precuneus. This region is involved in semantic priming and association processing whereas episodic memory contents might be addressed.

  9. Characterization and subcellular localization of an RNA silencing suppressor encoded by Rice stripe tenuivirus

    International Nuclear Information System (INIS)

    Xiong Ruyi; Wu Jianxiang; Zhou Yijun; Zhou Xueping

    2009-01-01

    Rice stripe virus (RSV) is a single-stranded (ss) RNA virus belonging to the genus Tenuivirus. RSV is present in many East Asian countries and causes severe diseases in rice fields, especially in China. In this study, we analyzed six proteins encoded by the virus for their abilities to suppress RNA silencing in plant using a green fluorescent protein (GFP)-based transient expression assay. Our results indicate that NS3 encoded by RSV RNA3, but not other five RSV encoded proteins, can strongly suppress local GFP silencing in agroinfiltrated Nicotiana benthamiana leaves. NS3 can reverse the GFP silencing, it can also prevent long distance spread of silencing signals which have been reported to be necessary for inducing systemic silencing in host plants. The NS3 protein can significantly reduce the levels of small interfering RNAs (siRNAs) in silencing cells, and was found to bind 21-nucleotide ss-siRNA, siRNA duplex and long ssRNA but not long double-stranded (ds)-RNA. Both N and C terminal of the NS3 protein are critical for silencing suppression, and mutation of the putative nuclear localization signal decreases its local silencing suppression efficiency and blocks its systemic silencing suppression. The NS3-GFP fusion protein and NS3 were shown to accumulate predominantly in nuclei of onion, tobacco and rice cells through transient expression assay or immunocytochemistry and electron microscopy. In addition, transgenic rice and tobacco plants expressing the NS3 did not show any apparent alteration in plant growth and morphology, although NS3 was proven to be a pathogenicity determinant in the PVX heterogenous system. Taken together, our results demonstrate that RSV NS3 is a suppressor of RNA silencing in planta, possibly through sequestering siRNA molecules generated in cells that are undergoing gene silencing.

  10. Ultra High Resolution Imaging of Enceladus Tiger Stripe Thermal Emission with Cassini CIRS

    Science.gov (United States)

    Spencer, John R.; Gorius, Nicolas; Howett, Carly; Verbiscer, Anne J.; Cassini CIRS Team

    2017-10-01

    In October 2015, Cassini flew within 48 km of Enceladus’ south pole. The spacecraft attitude was fixed during the flyby, but the roll angle of the spacecraft was chosen so that the remote sensing instrument fields of view passed over Damascus, Baghdad, and Cairo Sulci. The Composite Infrared Spectrometer (CIRS) instrument obtained a single interferometer scan during the flyby, using a special mode, enabled by a flight software update, which bypassed numerical filters to improve the fidelity of the interferograms. This generated a total of 11 interferograms, at 5 contiguous spatial locations for each of the 7 - 9 micron (FP4) and 9 - 17 micron (FP3) focal planes, and a single larger field of view for the 17 - 500 micron focal plane (FP1). Strong spikes were seen in the interferograms when crossing each of the sulci, due to the rapid passage of warm material through the field of view. For FP3 and FP4, the temporal variations of the signals from the 5 contiguous detectors can be used to generated 5-pixel-wide images of the thermal emission, which show excellent agreement between the two focal planes. FP3 and FP4 spatial resolution, limited along track by the 5 msec time sampling of the interferogram, and across track by the CIRS field of view, is a remarkable 40 x 40 meters. At this resolution, the tiger stripe thermal emission shows a large amount of structure, including both continuous emission along the fractures, discrete hot spots less than 100 meters across, and extended emission with complex structure.

  11. Evaluation of fatigue damage induced by thermal striping in a T junction using the three dimensional coupling method and frequency response method

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Sun Hye; Choi, Jae boong; Kim, Moon Ki [Sungkyunkwan Univ., Seoul (Korea, Republic of); Huh, Nam Su [Seoul Nat' l Univ., Seoul (Korea, Republic of); Lee, Jin Ho [Korea Institute of Nuclear Safety, Daejeon (Korea, Republic of)

    2012-10-15

    Thermal fatigue cracking induced by thermal stratification, cycling and striping have been observed in several PWR plants. Especially, thermal striping, the highly fluctuating thermal layer, became one of the significant problems, since it can cause un predicted high cycle thermal fatigue (HCTF) at piping systems. This problem are usually found in T junctions of energy cooling systems, where cold and hot flows with high level of turbulence mix together. Thermal striping can cause the networks of fatigue crack at the vicinity of weld parts and these cracks can propagate to significant depth in a relatively short time. Therefore, thermal striping and fatigue crack initiations should be predicted in advance to prevent the severe failure of piping systems. The final goal of this research is to develop a rational thermal and mechanical model considering thermohydraulic characteristics of thermal striping and an evaluation procedure to predict the initiation of thermal fatigue crack. As a first step, we evaluated the fatigue damage in a T junction using two widely used methods. Then, we analyzed the results of each method and conducted comparisons and verifications.

  12. Experimental study of a depth-encoding PET detector inserting horizontal-striped glass between crystal layers

    Science.gov (United States)

    Yang, J.; Kim, K. B.; Choi, Y.; Kang, J.

    2018-04-01

    A depth-encoding positron emission tomography (PET) detector inserting a horizontal-striped glass between pixilated scintillation crystal layers was developed and experimentally evaluated. The detector consists of 2-layers of 4×4 LYSO array arranged with a 3.37 mm pitch. Horizontal-striped glasses with 1×4 array with different thickness of 3, 4 and 5 mm were inserted between top- and bottom-crystal layers. Bottom surface of bottom-layer was optically coupled to a 4×4 GAPD array. Sixteen output signals from DOI-PET detector were multiplexed by modified resistive charge division (RCD) networks and multiplexed signals were fed into custom-made charge-sensitive preamplifiers. The four amplified signals were digitized and recorded by the custom-made DAQ system based on FPGA. The four digitized outputs were post-processed and converted to flood histograms for each interaction event. Experimental results revealed that all crystal pixels were clearly identified on the 2D flood histogram without overlapping. Patterns of the 2D flood histogram were constituted with arrangements of [bottom–top–bottom–top–\\ldots–top–bottom–top–bottom] crystal responses in X-direction. These could be achieved by employing horizontal-striped glass that controlled the extent of light dispersion towards the X-direction in crystal layers for generation of a different position mapping for each layer and the modified RCD network that controls degree of charge sharing in readout electronics for reduction of identification error. This study demonstrated the proposed DOI-PET detector can extract the 3D γ-ray interaction position without considerable performance degradation of PET detector from the 2D flood histogram.

  13. Co-Occurrence and Habitat Use of Fin Whales, Striped Dolphins and Atlantic Bluefin Tuna in the Northwestern Mediterranean Sea.

    Directory of Open Access Journals (Sweden)

    Robert Klaus Bauer

    Full Text Available Different dolphin and tuna species have frequently been reported to aggregate in areas of high frontal activity, sometimes developing close multi-species associations to increase feeding success. Aerial surveys are a common tool to monitor the density and abundance of marine mammals, and have recently become a focus in the search for methods to provide fisheries-independent abundance indicators for tuna stock assessment. In this study, we present first density estimates corrected for availability bias of fin whales (Balaenoptera physalus and striped dolphins (Stenella coeruleoalba from the Golf of Lions (GoL, compared with uncorrected estimates of Atlantic bluefin tuna (ABFT; Thunnus thynnus densities from 8 years of line transect aerial surveys. The raw sighting data were further used to analyze patterns of spatial co-occurrence and density of these three top marine predators in this important feeding ground in the Northwestern Mediterranean Sea. These patterns were investigated regarding known species-specific feeding preferences and environmental characteristics (i. e. mesoscale activity of the survey zone. ABFT was by far the most abundant species during the surveys in terms of schools and individuals, followed by striped dolphins and fin whales. However, when accounted for availability bias, schools of dolphins and fin whales were of equal density. Direct interactions of the species appeared to be the exception, but results indicate that densities, presence and core sighting locations of striped dolphins and ABFT were correlated. Core sighting areas of these species were located close to an area of high mesoscale activity (oceanic fronts and eddies. Fin whales did not show such a correlation. The results further highlight the feasibility to coordinate research efforts to explore the behaviour and abundance of the investigated species, as demanded by the Marine Strategy Framework Directive (MSFD.

  14. Effect of white striping myopathy on breast muscle (Pectoralis major) protein turnover and gene expression in broilers.

    Science.gov (United States)

    Vignale, Karen; Caldas, Justina V; England, Judy A; Boonsinchai, Nirun; Magnuson, Andrew; Pollock, Erik D; Dridi, Sami; Owens, Casey M; Coon, Craig N

    2017-04-01

    A study was conducted to evaluate the effect of white striping ( ) of broiler breast muscle ( Pectoralis major ) on protein turnover and gene expression of genes related to protein degradation and fatty acid synthesis. A total of 560 day-old male broiler chicks Cobb 500 were allocated in a total of 16 pens, 35 chicks per pen. A completely randomized design was conducted with a 2 × 3 factorial arrangement (2 scores: severe and normal, and 3 breast meat samples sites). At d 60, 20 birds were randomly selected, euthanized, and scored for white striping. Scoring was either normal ( , no WS) or severe ( ). Also, the same day, 17 birds (16 infused, one control) were randomly selected and infused with a solution of 15 N Phen 40% ( ). Breast muscle tissue was taken for gene expression analysis of the following genes: MuRF1, atrogin-1, IGF-1, insulin receptor ( ), fatty acid synthetase, and acetyl CoA carboxylase ( ). Each bird was humanely euthanized after 10 minutes of infusion and scored for WS (NORM or SEV). Samples of the breast muscle ( Pectoralis major ) were taken at different layers (3 samples per bird: ventral, medial, dorsal), along with a sample of excreta for 3-methylhistidine analysis. Out of the 16 breast samples taken, only 10 were selected for analysis based on the WS score (5 NORM and 5 SEV). No significant differences ( P > 0.05) were found in fractional synthesis rate ( ) between SEV WS, NORM and sample sites for breast meat. However, fractional breakdown rate ( ) was significantly higher in birds with SEV WS compared to NORM (8.2 and 4.28, respectively, P white striping are degrading more muscular protein and mobilizing more fat. © 2016 Poultry Science Association Inc.

  15. Spontaneous formation of nanopatterns in velocity-dependent dip-coated organic films: from dragonflies to stripes.

    Science.gov (United States)

    Corrales, Tomas P; Bai, Mengjun; del Campo, Valeria; Homm, Pia; Ferrari, Piero; Diama, Armand; Wagner, Christian; Taub, Haskell; Knorr, Klaus; Deutsch, Moshe; Retamal, Maria Jose; Volkmann, Ulrich G; Huber, Patrick

    2014-10-28

    We present an experimental study of the micro- and mesoscopic structure of thin films of medium length n-alkane molecules on the native oxide layer of a silicon surface, prepared by dip-coating in a n-C32H66/n-heptane solution. Electron micrographs reveal two distinct adsorption morphologies depending on the substrate withdrawal speed v. For small v, dragonfly-shaped molecular islands are observed. For a large v, stripes parallel to the withdrawal direction are observed. These have lengths of a few hundred micrometers and a few micrometer lateral separation. For a constant v, the stripes' quality and separation increase with the solution concentration. Grazing incidence X-ray diffraction and atomic force microscopy show that both patterns are 4.2 nm thick monolayers of fully extended, surface-normal-aligned alkane molecules. With increasing v, the surface coverage first decreases then increases for v > v(cr) ∼ 0.15 mm/s. The critical v(cr) marks a transition between the evaporation regime, where the solvent's meniscus remains at the bulk's surface, and the entrainment (Landau-Levich-Deryaguin) regime, where the solution is partially dragged by the substrate, covering the withdrawn substrate by a homogeneous film. The dragonflies are single crystals with habits determined by dendritic growth in prominent 2D crystalline directions of randomly seeded nuclei assumed to be quasi-hexagonal. The stripes' strong crystalline texture and the well-defined separation are due to an anisotropic 2D crystallization in narrow liquid fingers, which result from a Marangoni flow driven hydrodynamic instability in the evaporating dip-coated films, akin to the tears of wine phenomenology.

  16. Investigating behaviour and population dynamics of striped marlin (Kajikia audax from the southwest Pacific Ocean with satellite tags.

    Directory of Open Access Journals (Sweden)

    Tim Sippel

    Full Text Available Behaviour and distribution of striped marlin within the southwest Pacific Ocean were investigated using electronic tagging data collected from 2005-2008. A continuous-time correlated random-walk Kalman filter was used to integrate double-tagging data exhibiting variable error structures into movement trajectories composed of regular time-steps. This state-space trajectory integration approach improved longitude and latitude error distributions by 38.5 km and 22.2 km respectively. Using these trajectories as inputs, a behavioural classification model was developed to infer when, and where, 'transiting' and 'area-restricted' (ARB pseudo-behavioural states occurred. ARB tended to occur at shallower depths (108 ± 49 m than did transiting behaviours (127 ± 57 m. A 16 day post-release period of diminished ARB activity suggests that patterns of behaviour were affected by the capture and/or tagging events, implying that tagged animals may exhibit atypical behaviour upon release. The striped marlin in this study dove deeper and spent greater time at ≥ 200 m depth than those in the central and eastern Pacific Ocean. As marlin reached tropical latitudes (20-21 °S they consistently reversed directions, increased swimming speed and shifted to transiting behaviour. Reversals in the tropics also coincided with increases in swimming depth, including increased time ≥ 250 m. Our research provides enhanced understanding of the behavioural ecology of striped marlin. This has implications for the effectiveness of spatially explicit population models and we demonstrate the need to consider geographic variation when standardizing CPUE by depth, and provide data to inform natural and recreational fishing mortality parameters.

  17. Behavior and mortality of free-ranging raccoons, snowshoe hares, and striped skunks after exposure to 300 R γ radiation

    International Nuclear Information System (INIS)

    Tester, J.R.; Ternes, J.W.; Siniff, D.B.

    1977-01-01

    Free-ranging raccoons (Procyon lotor), snowshoe hares (Lepus americanus), and striped skunks (Mephitis mephitis) exposed to 300 R cesium-137 radiation were monitored by an automatic radio-tracking system. Five irradiated juvenile raccoons died within 30 days postirradiation, but no controls died. One irradiated and one control snowshoe hare were killed by predators within 30 days after irradiation. No skunks died. No consistent patterns of effects of the irradiation were detected in terms of size or location of home range or in the circadian rhythms

  18. Genetic characterisation of novel resistance alleles to stem rust and stripe rust in wheat-alien introgression lines

    OpenAIRE

    Rahmatov, Mahbubjon

    2016-01-01

    Bread wheat (Triticum aestivum L., 2n = 6x = 42, AABBDD) is one of the most important food crops world-wide, but is attacked by many diseases and pests that cause significant yield losses. Globally, stem rust (Sr) (Puccinia graminis f. sp. tritici Erikss & E. Henning), stripe rust (Yr) (Puccinia striiformis Westend. f. sp. tritici Eriks) and leaf rust (Lr) (Puccinia triticina Eriks) are a great threat to wheat production. The majority of the Sr, Yr and Lr resistance genes are already defeated...

  19. Nonequilibrium lattice-driven dynamics of stripes in nickelates using time-resolved x-ray scattering

    Energy Technology Data Exchange (ETDEWEB)

    Lee, W.S.; Kung, Y.F.; Moritz, B.; Coslovich, G.; Kaindl, R.A.; Chuang, Y.D.; Moore, R.G.; Lu, D.H.; Kirchmann, P.S.; Robinson, J.S.; Minitti, M.P.; Dakovski, G.; Schlotter, W.F.; Turner, J.J.; Gerber, S.; Sasagawa, T.; Hussain, Z.; Shen, Z.X.; Devereaux, T.P.

    2017-03-13

    We investigate the lattice coupling to the spin and charge orders in the striped nickelate, La 1.75 Sr 0.25 NiO 4 , using time-resolved resonant x-ray scattering. Lattice-driven dynamics of both spin and charge orders are observed when the pump photon energy is tuned to that of an E u bond- stretching phonon. We present a likely scenario for the behavior of the spin and charge order parameters and its implications using a Ginzburg-Landau theory.

  20. Spin beam splitter based on Goos-Haenchen shifts in two-dimensional electron gas modulated by ferromagnetic and Schottky metal stripes

    Energy Technology Data Exchange (ETDEWEB)

    Lu, Mao-Wang; Huang, Xin-Hong; Zhang, Gui-Lin; Chen, Sai-Yan [College of Science, Guilin University of Technology, Guilin 541004 (China)

    2012-11-15

    We present a theoretical study on the spin-dependent Goos-Haenchen (GH) effect in a two-dimensional electron gas modulated by ferromagnetic and Schottky metal (SM) stripes. The GH shifts for spin electron beams across this device are calculated with the help of the stationary phase method. It is shown that the GH shift of spin-up beam is significantly different from that of spin-down beam, i.e., this device shows up a considerable spin polarization effect in GH shifts of electron beams. It also is shown that both magnitude and sign of spin polarization of GH shifts are closely related to the stripe width, the magnetic strength and the gated voltage under SM stripe. These interesting properties not only provide an effective method of spin injection for spintronics application, but also give rise to a tunable spin beam splitter. (Copyright copyright 2012 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim)

  1. Fatal Systemic Toxoplasma gondii Infection in a Red Squirrel (Sciurus vulgaris), a Swinhoe's Striped Squirrel (Tamiops swinhoei) and a New World Porcupine (Erethizontidae sp.).

    Science.gov (United States)

    Fayyad, A; Kummerfeld, M; Davina, I; Wohlsein, P; Beineke, A; Baumgärtner, W; Puff, C

    2016-01-01

    Toxoplasmosis is a parasitic disease that affects man and animals worldwide. The primary hosts and major reservoir for Toxoplasma gondii are felids and the intermediate hosts are most warm-blooded animals including man. This report describes fatal toxoplasmosis in three different rodent species in Germany: a female red squirrel (Sciurus vulgaris) and a male Swinhoe's striped squirrel (Tamiops swinhoei), both kept as pets, and a female New World porcupine (Erethizontidae sp.) from a zoo. All three animals had multifocal necrotizing hepatitis. Additional findings included lymphohistiocytic and necrotizing myocarditis in the New World porcupine and the Swinhoe's striped squirrel, lymphohistiocytic encephalomyelitis in the New World porcupine and suppurative lymphadenitis in the red squirrel. Numerous tachyzoites were identified associated with the lesions. The diagnosis was confirmed by Toxoplasma. gondii immunohistochemistry and electron microscopy. This is the first report of toxoplasmosis in a New World porcupine and a Swinhoe's striped squirrel. Copyright © 2016 Elsevier Ltd. All rights reserved.

  2. Wheat hypersensitive-induced reaction genes TaHIR1 and TaHIR3 are involved in response to stripe rust fungus infection and abiotic stresses.

    Science.gov (United States)

    Duan, Yinghui; Guo, Jun; Shi, Xuexia; Guan, Xiangnan; Liu, Furong; Bai, Pengfei; Huang, Lili; Kang, Zhensheng

    2013-02-01

    KEY MESSAGE : TaHIR1 and TaHIR3 play positive roles in resistance to the stripe rust fungus via inducing HR and regulating defense-related genes, but are negatively regulated by various abiotic stimuli. Plant hypersensitive-induced reaction (HIR) genes are known to be associated with the hypersensitive response and disease defense. In wheat, two HIR genes, TaHIR1 and TaHIR3, have been identified and found to be up-regulated after infection with the stripe rust fungus. Here, we further determined their roles in defense against abiotic stresses and the stripe rust pathogen, Puccinia striiformis f. sp. tritici. TaHIR1 and TaHIR3 proteins were localized in the plasma membrane of tobacco cells. The expression of TaHIR1 and TaHIR3 was reduced by the environmental stimuli, including low temperature, drought, and high salinity stresses. In addition, the expression of TaHIR1 and TaHIR3 was down-regulated by exogenously applied ethrel and abscisic acid, whereas expression was not affected by treatments with salicylic acid and methyl jasmonate. Furthermore, barley stripe mosaic virus-induced gene silencing of TaHIR1 and TaHIR3 reduced resistance in wheat cultivar Suwon11 against an avirulent stripe rust pathotype CYR23 and area of necrotic cells neighboring the infection sites, and altered the expression levels of defense-related genes. These results suggest that TaHIR1 and TaHIR3 function positively in the incompatible interaction of wheat-stripe rust fungus, but exhibit negative transcriptional response to abiotic stresses.

  3. Mapping of stripe rust resistance QTL in Cappelle-Desprez × PBW343 RIL population effective in northern wheat belt of India.

    Science.gov (United States)

    Pawar, Sushma Kumari; Sharma, Davinder; Duhan, Joginder Singh; Saharan, Mahender Singh; Tiwari, Ratan; Sharma, Indu

    2016-06-01

    Stripe rust caused by Puccinia striiformis f. sp. tritici is most important and devastating disease of wheat worldwide, which affects the grain yields, quality and nutrition. To elucidate, the genetic basis of resistance, a mapping population of recombinant inbred lines was developed from a cross between resistant Cappelle-Desprez and susceptible cultivar PBW343 using single-seed descent. Variety PBW343 had been one of the most popular cultivars of North Western Plains Zone, for more than a decade, before succumbing to the stripe rust. Cappelle-Desprez, a source of durable adult plant resistance, has maintained its resistance against stripe rust for a long time in Europe. Map construction and QTL analysis were completed with 1012 polymorphic (DArT and SSR) markers. Screenings for stripe rust disease were carried out in field condition for two consecutive crop seasons (2012-2013 and 2013-2014). Susceptible parent (PBW343) achieved a significant level of disease i.e., 100 % in both the years. In present investigations, resistance in Cappelle-Desprez was found stable and response to the rust ranged from 0 to 1.5 % over the years. The estimated broad-sense heritability (h 2 ) of stripe rust rAUDPC in the mapping population was 0.82. The relative area under the disease progress curve data showed continuous distributions, indicating that trait was controlled multigenically. Genomic region identified on chromosome 2D, was located within the short arm, with flanking markers (Xgwm484-Xcfd73), explained phenotypic variation (PVE) ranged from 13.9 to 31.8 %. The genomic region identified on chromosome 5B was found with the effect of maximum contribution with flanking DArT markers (1376633|F|0-1207571|F|0), PVE ranged from 24 to 27.0 %. This can, therefore, be utilized for marker assisted selection in developing much needed stripe rust resistant lines for the northern wheat belt of India.

  4. Oxidative Damage Does Not Occur in Striped Hamsters Raising Natural and Experimentally Increased Litter Size.

    Directory of Open Access Journals (Sweden)

    Xiao-Ya Zhao

    Full Text Available Life-history theory assumes that animals can balance the allocation of limited energy or resources to the competing demands of growth, reproduction and somatic maintenance, while consequently maximizing their fitness. However, somatic damage caused by oxidative stress in reproductive female animals is species-specific or is tissue dependent. In the present study, several markers of oxidative stress (hydrogen peroxide, H2O2 and malonadialdehyde, MDA and antioxidant (catalase, CAT and total antioxidant capacity, T-AOC were examined in striped hamsters during different stages of reproduction with experimentally manipulated litter size. Energy intake, resting metabolic rate (RMR, and mRNA expression of uncoupling protein 1 (UCP1 in brown adipose tissue (BAT and UCP3 in skeletal muscle were also examined. H2O2 and MDA levels did not change in BAT and liver, although they significantly decreased in skeletal muscle in the lactating hamsters compared to the non-reproductive group. However, H2O2 levels in the brain were significantly higher in lactating hamsters than non-reproductive controls. Experimentally increasing litter size did not cause oxidative stress in BAT, liver and skeletal muscle, but significantly elevated H2O2 levels in the brain. CAT activity of liver decreased, but CAT and T-AOC activity of BAT, skeletal muscle and the brain did not change in lactating hamsters compared to non-reproductive controls. Both antioxidants did not change with the experimentally increasing litter size. RMR significantly increased, but BAT UCP1 mRNA expression decreased with the experimentally increased litter size, suggesting that it was against simple positive links between metabolic rate, UCP1 expression and free radicals levels. It may suggest that the cost of reproduction has negligible effect on oxidative stress or even attenuates oxidative stress in some active tissues in an extensive range of animal species. But the increasing reproductive effort may

  5. Oral vaccination and protection of striped skunks (Mephitis mephitis) against rabies using ONRAB®.

    Science.gov (United States)

    Brown, L J; Rosatte, R C; Fehlner-Gardiner, C; Ellison, J A; Jackson, F R; Bachmann, P; Taylor, J S; Franka, R; Donovan, D

    2014-06-17

    Skunks are one of the most important rabies vector species in North America due to their wide geographic distribution, high susceptibility to the rabies virus, and tendency to inhabit areas around human dwellings and domestic animals. Oral vaccination is a cost-effective, socially acceptable technique often used to control rabies in terrestrial wildlife; however, control of rabies in skunks has proven especially challenging due to the lack of a vaccine effective by the oral route in this species. In this study, we examined the antibody response of captive striped skunks (Mephitis mephitis) to ONRAB(®) and tested the protection afforded by the vaccine against rabies virus. Thirty-one skunks were each offered one ONRAB(®) vaccine bait, 25 skunks were administered ONRAB(®) via direct instillation into the oral cavity (DIOC) and ten controls received no vaccine. A blood sample was collected from controls and vaccinates 6 weeks prior to treatment, and then 5 and 7 weeks post-vaccination (PV). A competitive ELISA was used to detect rabies antibody (RAb). Pre-vaccination sera for all skunks, and sera for all controls throughout the serology study, were negative for RAb. Fifty-eight percent (18/31) of skunks in the bait group and 100% (25/25) of skunks that received ONRAB(®) DIOC had detectable RAb by 7 week PV. All 10 controls succumbed to experimental rabies infection. In the group of skunks administered ONRAB(®) DIOC, 100% (23/23) survived challenge 247 days PV. Survival of skunks presented ONRAB(®) baits was 81% (25/31). In the bait group, all 18 skunks that had detectable RAb by 7 week PV survived challenge. Seven additional skunks without detectable RAb prior to week 7 PV also survived. Lack of any remarkable pathology in study animals, together with positive serology and challenge results, supports that ONRAB(®) is a safe and effective oral rabies vaccine for use in skunks. Copyright © 2014 Elsevier Ltd. All rights reserved.

  6. Impact of white striping on functionality attributes of broiler breast meat1.

    Science.gov (United States)

    Bowker, B; Zhuang, H

    2016-08-01

    The influence of white striping (WS) on the water-holding capacity (WHC) and protein functionality attributes of broiler breast meat was investigated. Boneless breast fillets (Pectoralis major) were collected from the deboning line of a commercial processing plant and categorized by WS score (normal, moderate, severe). The physical (weight, pH, CIE-color values), water-holding capacity (salt-induced water uptake, cook loss, final yield), protein functionality (solubility, emulsifying activity), and protein composition (SDS-PAGE) characteristics of the fillets were measured in three experiments. Breast meat with WS exhibited greater fillet weights, higher pH, and similar color values (L*a*b*) to normal fillets. In experiment 1, fillets were frozen-thawed prior to analysis. The WS condition reduced thaw loss, sarcoplasmic protein solubility, and the emulsifying activity of the myofibrillar proteins, but did not significantly affect salt-induced water uptake, cook loss, final yield, or myofibrillar protein solubility. In experiment 2, breast meat was analyzed fresh and after a freeze-thaw cycle. Freezing samples prior to analysis negatively influenced WHC and reduced sarcoplasmic protein solubility in both WS and normal fillets. In fresh and frozen-thawed meat, the WS condition decreased sarcoplasmic protein solubility but did not significantly alter WHC or myofibrillar protein solubility. For experiment 3, fillets were portioned into 3 sections (Location A, cranial end-ventral surface; Location B, cranial end-dorsal surface; Location C, caudal end). The effects of WS on WHC and protein solubility were dependent upon breast fillet sampling location. Fillets with WS exhibited lower salt-induced water uptake, greater cook loss, and lower sarcoplasmic protein solubility than normal fillets when sampled from location A. SDS-PAGE analysis indicated that differences in the composition of sarcoplasmic and myofibrillar protein fractions between WS and normal fillets were

  7. Sequence elements controlling expression of Barley stripe mosaic virus subgenomic RNAs in vivo

    International Nuclear Information System (INIS)

    Johnson, Jennifer A.; Bragg, Jennifer N.; Lawrence, Diane M.; Jackson, Andrew O.

    2003-01-01

    Barley stripe mosaic virus (BSMV) contains three positive-sense, single-stranded genomic RNAs, designated α, β, and γ, that encode seven major proteins and one minor translational readthrough protein. Three proteins (αa, βa, and γa) are translated directly from the genomic RNAs and the remaining proteins encoded on RNAβ and RNAγ are expressed via three subgenomic messenger RNAs (sgRNAs). sgRNAβ1 directs synthesis of the triple gene block 1 (TGB1) protein. The TGB2 protein, the TGB2' minor translational readthrough protein, and the TGB3 protein are expressed from sgRNAβ2, which is present in considerably lower abundance than sgRNAβ1. A third sgRNA, sgRNAγ, is required for expression of the γb protein. We have used deletion analyses and site-specific mutations to define the boundaries of promoter regions that are critical for expression of the BSMV sgRNAs in infected protoplasts. The results reveal that the sgRNAβ1 promoter encompasses positions -29 to -2 relative to its transcription start site and is adjacent to a cis-acting element required for RNAβ replication that maps from -107 to -74 relative to the sgRNAβ1 start site. The core sgRNAβ2 promoter includes residues -32 to -17 relative to the sgRNAβ2 transcriptional start site, although maximal activity requires an upstream hexanucleotide sequence residing from positions -64 to -59. The sgRNAγ promoter maps from -21 to +2 relative to its transcription start site and therefore partially overlaps the γa gene. The sgRNAβ1, β2, and γ promoters also differ substantially in sequence, but have similarities to the putative homologous promoters of other Hordeiviruses. These differences are postulated to affect competition for the viral polymerase, coordination of the temporal expression and abundance of the TGB proteins, and constitutive expression of the γb protein

  8. Genomic and pedigree-based prediction for leaf, stem, and stripe rust resistance in wheat.

    Science.gov (United States)

    Juliana, Philomin; Singh, Ravi P; Singh, Pawan K; Crossa, Jose; Huerta-Espino, Julio; Lan, Caixia; Bhavani, Sridhar; Rutkoski, Jessica E; Poland, Jesse A; Bergstrom, Gary C; Sorrells, Mark E

    2017-07-01

    Genomic prediction for seedling and adult plant resistance to wheat rusts was compared to prediction using few markers as fixed effects in a least-squares approach and pedigree-based prediction. The unceasing plant-pathogen arms race and ephemeral nature of some rust resistance genes have been challenging for wheat (Triticum aestivum L.) breeding programs and farmers. Hence, it is important to devise strategies for effective evaluation and exploitation of quantitative rust resistance. One promising approach that could accelerate gain from selection for rust resistance is 'genomic selection' which utilizes dense genome-wide markers to estimate the breeding values (BVs) for quantitative traits. Our objective was to compare three genomic prediction models including genomic best linear unbiased prediction (GBLUP), GBLUP A that was GBLUP with selected loci as fixed effects and reproducing kernel Hilbert spaces-markers (RKHS-M) with least-squares (LS) approach, RKHS-pedigree (RKHS-P), and RKHS markers and pedigree (RKHS-MP) to determine the BVs for seedling and/or adult plant resistance (APR) to leaf rust (LR), stem rust (SR), and stripe rust (YR). The 333 lines in the 45th IBWSN and the 313 lines in the 46th IBWSN were genotyped using genotyping-by-sequencing and phenotyped in replicated trials. The mean prediction accuracies ranged from 0.31-0.74 for LR seedling, 0.12-0.56 for LR APR, 0.31-0.65 for SR APR, 0.70-0.78 for YR seedling, and 0.34-0.71 for YR APR. For most datasets, the RKHS-MP model gave the highest accuracies, while LS gave the lowest. GBLUP, GBLUP A, RKHS-M, and RKHS-P models gave similar accuracies. Using genome-wide marker-based models resulted in an average of 42% increase in accuracy over LS. We conclude that GS is a promising approach for improvement of quantitative rust resistance and can be implemented in the breeding pipeline.

  9. Inferring Enceladus' ice shell strength and structure from Tiger Stripe formation

    Science.gov (United States)

    Rhoden, A.; Hurford, T., Jr.; Spitale, J.; Henning, W. G.

    2017-12-01

    The tiger stripe fractures (TSFs) of Enceladus are four, roughly parallel, linear fractures that correlate with plume sources and high heat flows measured by Cassini. Diurnal variations of plume eruptions along the TSFs strongly suggest that tides modulate the eruptions. Several attempts have been made to infer Enceladus' ice shell structure, and the mechanical process of plume formation, by matching variations in the plumes' eruptive output with tidal stresses for different interior models. Unfortunately, the many, often degenerate, unknowns make these analyses non-unique. Tidal-interior models that best match the observed plume variability imply very low tidal stresses (<14 kPa), much lower than the 1 MPa tensile strength of ice implied by lab experiments or the 100 kPa threshold inferred for Europa's ice. In addition, the interior models that give the best matches are inconsistent with the constraints from observed librations. To gain more insight into the interior structure and rheology of Enceladus and the role of tidal stress in the development of the south polar terrain, we utilize the orientations of the TSFs themselves as observational constraints on tidal-interior models. While the initial formation of the TSFs has previously been attributed to tidal stress, detailed modeling of their formation has not been performed until now. We compute tidal stresses for a suite of rheologically-layered interior models, consistent with Enceladus' observed librations, and apply a variety of failure conditions. We then compare the measured orientations at 6391 points along the TSFs with the predicted orientations from the tidal models. Ultimately, we compute the likelihood of forming the TSFs with tidal stresses for each model and failure condition. We find that tidal stresses are a good match to the observed orientations of the TSFs and likely led to their formation. We also find that the model with the highest likelihood changes depending on the failure criterion

  10. Environmental comparison of intensive and integrated agriculture-aquaculture systems for striped catfish production in the Mekong Delta, Vietnam, based on two existing case studies using life cycle assessment

    NARCIS (Netherlands)

    Kluts, I.N.; Potting, J.M.B.; Bosma, R.H.; Phong, L.T.; Udo, H.M.J.

    2012-01-01

    Vietnam is the largest producer for the export of striped catfish. Traditionally striped catfish production in the Mekong Delta took place in integrated agriculture–aquaculture systems, but has shifted recently to intensive systems to meet increasing export demands. A recent study quantified the

  11. Stripe rust and leaf rust resistance QTL mapping, epistatic interactions, and co-localization with stem rust resistance loci in spring wheat evaluated over three continents.

    Science.gov (United States)

    Singh, A; Knox, R E; DePauw, R M; Singh, A K; Cuthbert, R D; Campbell, H L; Shorter, S; Bhavani, S

    2014-11-01

    In wheat, advantageous gene-rich or pleiotropic regions for stripe, leaf, and stem rust and epistatic interactions between rust resistance loci should be accounted for in plant breeding strategies. Leaf rust (Puccinia triticina Eriks.) and stripe rust (Puccinia striiformis f. tritici Eriks) contribute to major production losses in many regions worldwide. The objectives of this research were to identify and study epistatic interactions of quantitative trait loci (QTL) for stripe and leaf rust resistance in a doubled haploid (DH) population derived from the cross of Canadian wheat cultivars, AC Cadillac and Carberry. The relationship of leaf and stripe rust resistance QTL that co-located with stem rust resistance QTL previously mapped in this population was also investigated. The Carberry/AC Cadillac population was genotyped with DArT(®) and simple sequence repeat markers. The parents and population were phenotyped for stripe rust severity and infection response in field rust nurseries in Kenya (Njoro), Canada (Swift Current), and New Zealand (Lincoln); and for leaf rust severity and infection response in field nurseries in Canada (Swift Current) and New Zealand (Lincoln). AC Cadillac was a source of stripe rust resistance QTL on chromosomes 2A, 2B, 3A, 3B, 5B, and 7B; and Carberry was a source of resistance on chromosomes 2B, 4B, and 7A. AC Cadillac contributed QTL for resistance to leaf rust on chromosome 2A and Carberry contributed QTL on chromosomes 2B and 4B. Stripe rust resistance QTL co-localized with previously reported stem rust resistance QTL on 2B, 3B, and 7B, while leaf rust resistance QTL co-localized with 4B stem rust resistance QTL. Several epistatic interactions were identified both for stripe and leaf rust resistance QTL. We have identified useful combinations of genetic loci with main and epistatic effects. Multiple disease resistance regions identified on chromosomes 2A, 2B, 3B, 4B, 5B, and 7B are prime candidates for further investigation and

  12. Population growth and within-plant distribution of the striped mealybug Ferrisia virgata (Cockerell (Hemiptera, Pseudococcidae on cotton

    Directory of Open Access Journals (Sweden)

    Martin D. Oliveira

    2014-03-01

    Full Text Available Population growth and within-plant distribution of the striped mealybug Ferrisia virgata (Cockerell (Hemiptera, Pseudococcidae on cotton. The striped mealybug, Ferrisia virgata (Cockerell (Hemiptera, Pseudococcidae, is a widely distributed and polyphagous pest species, which naturally occurs on cotton plants in Brazil. This study evaluated the establishment and population growth as well as the within-plant distribution of F. virgata on four cotton cultivars: CNPA 7H (white fibers, BRS Verde, BRS Safira, and BRS Rubi (colored fibers. The experiment was conducted in a complete randomized design with four treatments (cultivars and 18 replications of each. Thus, cotton plants of each cultivar were infested with 100 newly hatched nymphs of F. virgata. The number of adult female mealybugs and the total number of mealybugs per plant were quantified, respectively, at 25 and 50 days after infestation. The developmental and pre-reproductive periods were also determined. Furthermore, we verified the distribution of F. virgata on the plant parts at 25 and 50 days after infestation. Ferrisia virgata showed similar growth of 412-fold in the four cotton cultivars studied. Also, the nymphs were spread on infested leaves; the secondgeneration nymphs were spread and established in all plant parts. Our results characterize F. virgata as having much potential as an important cotton pest in Brazil.

  13. PENGKLONAN DAN PERUNUTAN NUKLEOTIDA GEN SELUBUNG PROTEIN DAN 3’UTR (untranslated region PEANUT STRIPE VIRUS

    Directory of Open Access Journals (Sweden)

    Hasriadi Mat Akin

    2011-10-01

    Full Text Available Cloning and sequencing of coat protein gene and 3’UTR (untranslated region of peanut stripe virus. The cDNA of 3' terminal of peanut stripe virus genomic RNA was cloned and sequenced. The cDNA was ligated with plasmid vector pGEM-T Easy and transformed to competent cells of Escherichia coli. The 3' terminal of PstV genomic RNA contained 1195 nucleotides (nts.  The region included the nucleotide sequences of NIb (nuclear inclusion body (129 nts, CP gene (coat protein gene (861 nts, and 3'UTR (untranslated region (205 nts. The nucleotide sequence of a CP gene contained one long uninterrupted open reading frame (ORF without a start codon, which ended a UAG stop codon. The 287 amino acid residues of PStV coat protein were predicted from the CP gene.  The amino acid was analyzed for the presence of consensus polyprotein cleavage site for maturation of potyvirus polyprotein.  A putative cleavage site was found at position 43 (Q/S following the Valine (V residue at -4 position.  This isolate of PstV can be expected to be aphid transmissible because the coat protein contained a DAG triplet at position 53-55.

  14. The presence of Brucella ceti ST26 in a striped dolphin (Stenella coeruleoalba) with meningoencephalitis from the Mediterranean Sea.

    Science.gov (United States)

    Alba, Patricia; Terracciano, Giuliana; Franco, Alessia; Lorenzetti, Serena; Cocumelli, Cristiano; Fichi, Gianluca; Eleni, Claudia; Zygmunt, Michel S; Cloeckaert, Axel; Battisti, Antonio

    2013-05-31

    Brucella spp. was isolated from brain, lung and intestinal lymph nodes of a dead adult male striped dolphin (Stenella coeruleoalba) found stranded on the Tyrrhenian coast (Tuscany, Italy) of the Mediterranean Sea in February 2012. Brucella spp. was associated with moderate to severe lesions of meningoencephalitis. A co-infection by Toxoplasma gondii was also demonstrated at brain level by means of molecular and histopathologic methods. The Brucella isolate was further characterized based on a fragment-specific polymerase chain reaction (PCR) approach, consisting of a set of five specific PCRs, targeting specific chromosomal IS711 locations for marine mammal Brucellae, as described previously. The isolate was thus classified as Brucella ceti I; V fragment-positive (or B. ceti dolphin type), according to previous studies. Multi Locus Sequence Analysis demonstrated that the isolate belongs to Sequence Type 26, while omp2 (omp2a and omp2b genes) sequence analysis further confirmed the isolate belonged to this group of strains. This is the first report of Brucella spp. from marine mammals in the Mediterranean Sea, and represents a further observation that this strain group is associated with hosts of the Family Delphinidae, and particularly with the striped dolphins, also in the Mediterranean area, thus constituting a further biological hazard of concern for this vulnerable subpopulation. Copyright © 2013 Elsevier B.V. All rights reserved.

  15. Assessment of Relationship Between Bacterial Stripe Resistance And Leaf Protein Bands In Rice (Oryza sativa L.) Varieties.

    Science.gov (United States)

    Talei, D.; Fotokian, M. H.

    2008-01-01

    Bacterial stripe as a new rice disease in Iran is more frequent nowadays. The objective of this study was to assessment of resistance in rice varieties together with evaluating of zymogram bands resulted from SDS PAGE electrophoresis of leaf proteins. For this purpose, 30 lines were tested in a randomized complete block design with three replications. The analysis of variance showed that there was significant difference between genotypes for resistance. Mean compare based on field results revealed that Domsiyah had the lowest resistance while Nemat and 7162 demonstrated the highest resistance. Laboratory results showed that there were significant difference between protein bands resulted from sensitive and resistance verities. Twenty bands were observed through SDS PAGE electrophoresis of leaf proteins. The 9th and 12th bands were found in sensitive varieties while were not in resistance genotypes. According to the results of this study, 7162 variety can be considered as the sources of resistance in breeding programs. Meanwhile attending to existence of 9th and 12th bands in sensitive varieties, resistance against bacterial stripe of rice maybe influenced by absence of these proteins.

  16. Mining centuries old in-situ conserved Turkish wheat landraces for grain yield and stripe rust resistance genes

    Directory of Open Access Journals (Sweden)

    Deepmala Sehgal

    2016-11-01

    Full Text Available Wheat landraces in Turkey are an important genetic resource for wheat improvement. An exhaustive five-year (2009-2014 effort made by the International Winter Wheat Improvement Programme (IWWIP a cooperative program between the Ministry of Food, Agriculture and Livestock of Turkey, the International Center for Maize and Wheat Improvement (CIMMYT and the International Center for Agricultural Research in the Dry Areas (ICARDA, led to the collection and documentation of around 2,000 landrace populations from 55 provinces throughout Turkey. This study reports the genetic characterization of a subset of bread wheat landraces collected in 2010 from 11 diverse provinces using genotyping-by-sequencing (GBS technology. The potential of this collection to identify loci determining grain yield and stripe rust resistance via genome-wide association (GWA analysis was explored. A high genetic diversity (diversity index = 0.260 and a moderate population structure based on highly inherited spike traits was revealed in the panel. The linkage disequilibrium decayed at 10 cM across the whole genome and was slower as compared to other landrace collections. In addition to previously reported QTL, GWA analysis also identified new candidate genomic regions for stripe rust resistance, grain yield and spike productivity components. New candidate genomic regions reflect the potential of this landrace collection to further increase genetic diversity in elite germplasm.

  17. Screening of wheat germplasm for the source of resistance against leaf and stripe rust under climatic conditions in Bhakkar

    International Nuclear Information System (INIS)

    Bhatti, M.A.; Burhan, M.; Shahzad, M.A.; Aslam, M.

    2009-01-01

    A field experiment was conducted to assess the level of resistance and susceptibility against stripe and leaf rust of wheat at Arid Zone Research 1, Institute, Bhakkar during, Rabi 2009, One hundred wheat genotypes were sown in second week of November. Each test line/variety of planted in two rows of 2 meter reach will two row of Morocco after every three entries to increase the disease pressure, fest lines/ varieties were inoculated thrice with highly susceptible Morocco and two most virulent Lr-26 and Lr-23 patho type. Out of eighty four test entries/varieties screened against le leaf rust, 5 exhibited resistant 21 moderately susceptible, 20 susceptible, 28 moderately resistant and 10 were highly susceptible. The present investigation indicated that there was no highly resistant lines/variety with zero disease severity. On the other hand, as regards stripe rust, out of thirty seven lines/varieties only two lines were susceptible to disease, Among other lines/ varieties, 12 resistant, 11 moderately resistant, 6 moderately susceptible and 2 susceptible against disease. Four (4) lines /varieties proved as highly resistant with zero disease severity.

  18. Genome-Wide Association Mapping for Resistance to Leaf and Stripe Rust in Winter-Habit Hexaploid Wheat Landraces.

    Directory of Open Access Journals (Sweden)

    Albert Kertho

    Full Text Available Leaf rust, caused by Puccinia triticina (Pt, and stripe rust, caused by P. striiformis f. sp. tritici (Pst, are destructive foliar diseases of wheat worldwide. Breeding for disease resistance is the preferred strategy of managing both diseases. The continued emergence of new races of Pt and Pst requires a constant search for new sources of resistance. Here we report a genome-wide association analysis of 567 winter wheat (Triticum aestivum landrace accessions using the Infinium iSelect 9K wheat SNP array to identify loci associated with seedling resistance to five races of Pt (MDCL, MFPS, THBL, TDBG, and TBDJ and one race of Pst (PSTv-37 frequently found in the Northern Great Plains of the United States. Mixed linear models identified 65 and eight significant markers associated with leaf rust and stripe rust, respectively. Further, we identified 31 and three QTL associated with resistance to Pt and Pst, respectively. Eleven QTL, identified on chromosomes 3A, 4A, 5A, and 6D, are previously unknown for leaf rust resistance in T. aestivum.

  19. Biotelemetry study of spring and summer habitat selection by striped bass in Cherokee Reservoir, Tennessee, 1978. [Morone saxatilis

    Energy Technology Data Exchange (ETDEWEB)

    Schaich, B.A.; Coutant, C.C.

    1980-08-01

    Habitat selection of 31 adult striped bass was monitored by temperature sensing ultrasonic and radio transmitters in Cherokee Reservoir, Tennessee, from March through October 1978. This study sought to corroborate summer data obtained by Waddle (1979) in 1977 and to examine mechanisms of habitat selection by observing establishment of the summer distribution. During the spring and early summer months the striped bass ranged throughout the study area in the downstream half of the reservoir. Fish stayed near the bottom at the preferred temperatures throughout the whole study, and no individuals were observed in open water. Movement rates of up to 2.6 km/day were estimated, and rates of 1 km/day were common in the spring. By late July they were apparently avoiding low dissolved oxygen (D.O.) concentrations (<3 mg/l) near the bottom of the main reservoir and epilimnion temperatures greater than 22/sup 0/C, and they moved into cool, oxygenated spring or creek channels (refuges). Low movement rates of 0 to 25 m/day within these refuges occurred. The rates of the few migrations between refuges could not be estimated. Tagged fish moved out of the refuges 3 to 4 weeks after the fall overturn when reservoir temperatures approximated 22 to 24/sup 0/C.

  20. Fine mapping of the Bsr1 barley stripe mosaic virus resistance gene in the model grass Brachypodium distachyon.

    Directory of Open Access Journals (Sweden)

    Yu Cui

    Full Text Available The ND18 strain of Barley stripe mosaic virus (BSMV infects several lines of Brachypodium distachyon, a recently developed model system for genomics research in cereals. Among the inbred lines tested, Bd3-1 is highly resistant at 20 to 25 °C, whereas Bd21 is susceptible and infection results in an intense mosaic phenotype accompanied by high levels of replicating virus. We generated an F(6:7 recombinant inbred line (RIL population from a cross between Bd3-1 and Bd21 and used the RILs, and an F(2 population of a second Bd21 × Bd3-1 cross to evaluate the inheritance of resistance. The results indicate that resistance segregates as expected for a single dominant gene, which we have designated Barley stripe mosaic virus resistance 1 (Bsr1. We constructed a genetic linkage map of the RIL population using SNP markers to map this gene to within 705 Kb of the distal end of the top of chromosome 3. Additional CAPS and Indel markers were used to fine map Bsr1 to a 23 Kb interval containing five putative genes. Our study demonstrates the power of using RILs to rapidly map the genetic determinants of BSMV resistance in Brachypodium. Moreover, the RILs and their associated genetic map, when combined with the complete genomic sequence of Brachypodium, provide new resources for genetic analyses of many other traits.

  1. Wheat TaRab7 GTPase is part of the signaling pathway in responses to stripe rust and abiotic stimuli.

    Directory of Open Access Journals (Sweden)

    Furong Liu

    Full Text Available Small GTP-binding proteins function as regulators of specific intercellular fundamental biological processes. In this study, a small GTP-binding protein Rab7 gene, designated as TaRab7, was identified and characterized from a cDNA library of wheat leaves infected with Puccinia striiformis f. sp. tritici (Pst the wheat stripe rust pathogen. The gene was predicted to encode a protein of 206 amino acids, with a molecular mass of 23.13 KDa and an isoeletric point (pI of 5.13. Further analysis revealed the presence of a conserved signature that is characteristic of Rab7, and phylogenetic analysis demonstrated that TaRab7 has the highest similarity to a small GTP binding protein gene (BdRab7-like from Brachypodium distachyon. Quantitative real-time PCR assays revealed that the expression of TaRab7 was higher in the early stage of the incompatible interactions between wheat and Pst than in the compatible interaction, and the transcription level of TaRab7 was also highly induced by environmental stress stimuli. Furthermore, knocking down TaRab7 expression by virus induced gene silencing enhanced the susceptibility of wheat cv. Suwon 11 to an avirulent race CYR23. These results imply that TaRab7 plays an important role in the early stage of wheat-stripe rust fungus interaction and in stress tolerance.

  2. Wheat stripe rust resistance protein WKS1 reduces the ability of the thylakoid-associated ascorbate peroxidase to detoxify reactive oxygen species

    Science.gov (United States)

    Stripe rust is a devastating fungal disease of wheat caused by Puccinia striiformis f. sp. tritici(Pst). The WKS1 resistance gene has an unusual combination of serine/threonine kinase and START lipid-binding domains and confers partial resistance to Pst. Here we show that wheat plants transformed w...

  3. A new early-warning system for stripe rust affecting wheat and triticale: Host-pathogen interactions under different environmental conditions

    DEFF Research Database (Denmark)

    Rodriguez Algaba, Julian; Justesen, Annemarie Fejer; Hovmøller, Mogens Støvring

    Stripe (yellow) rust has been the most damaging disease in Danish organic wheat and triticale production since 2009. There were estimated losses of approximately 50 million DKK (9 million USD) in 2009. Until that time, triticale was considered the most robust cereal crop for organic farming. The ...

  4. Philometra rubra (Nematoda: Philometridae) first description of the male from striped bass (Morone saxatilis) and implications for re-introduction of an extirpated population

    Czech Academy of Sciences Publication Activity Database

    Measures, L.; Moravec, František; Douglas, S.; Lair, S.

    2017-01-01

    Roč. 95, č. 5 (2017), s. 345-352 ISSN 0008-4301 R&D Projects: GA ČR(CZ) GBP505/12/G112 Institutional support: RVO:60077344 Keywords : Philometra rubra * striped bass * Morone saxatilis * re-introduction * conservation Subject RIV: EG - Zoology OBOR OECD: Zoology Impact factor: 1.347, year: 2016

  5. Computer simulation model for the striped bass young-of-the-year population in the Hudson River. [Effects of entrainment and impingement at power plants on population dynamics

    Energy Technology Data Exchange (ETDEWEB)

    Eraslan, A.H.; Van Winkle, W.; Sharp, R.D.; Christensen, S.W.; Goodyear, C.P.; Rush, R.M.; Fulkerson, W.

    1975-09-01

    This report presents a daily transient (tidal-averaged), longitudinally one-dimensional (cross-section-averaged) computer simulation model for the assessment of the entrainment and impingement impacts of power plant operations on young-of-the-year populations of the striped bass, Morone saxatilis, in the Hudson River.

  6. Brachypodium distachyon line Bd3-1 resistance is elicited by the barley stripe mosaic virus triple gene block 1 movement protein

    NARCIS (Netherlands)

    Lee, M.Y.; Yan, L.J.; Gorter, F.A.; Kim, B.Y.T.; Cui, Y.; Hu, Y.; Yuan, C.; Grindheim, J.; Ganesan, U.; Liu, Z.Y.; Han, C.G.; Yu, J.L.; Li, D.W.; Jackson, A.O.

    2012-01-01

    Barley stripe mosaic virus North Dakota 18 (ND18), Beijing (BJ), Xinjiang (Xi), Type (TY) and CV21 strains are unable to infect the Brachypodium distachyon Bd3-1 inbred line, which harbours a resistance gene designated Bsr1, but the Norwich (NW) strain is virulent on Bd3-1. Analysis of ND18 and NW

  7. Life cycle assessment of intensive striped catfish farming in the Mekong Delta for screening hotspots as input to environmental policy and research agenda

    NARCIS (Netherlands)

    Bosma, R.H.; Pham Thi Ahn,; Potting, J.

    2011-01-01

    Purpose Intensive striped catfish production in the Mekong Delta has, in recent years, raised environmental concerns. We conducted a stakeholder-based screening life cycle assessment (LCA) of the intensive farming system to determine the critical environmental impact and their causative processes in

  8. Species Profiles: Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (Pacific Southwest). Pile Perch, Striped Seaperch, and Rubberlip Seaperch

    Science.gov (United States)

    1989-07-01

    pile perch Class .. ......... ... Osteichthyes (Figure 1) Order .. .......... .Perciformes Local common names . . pile surfperch, Family...Embiotocidae fork-tail perch, porgy Class .. ......... ... Osteichthyes Geographic range: Port Wrangell, Order .. .......... .Perciformes Alaska, to...SAN DIEGO Figure 2. California distribution of pile perch, striped seaperch, and rubberlip seaperch. 2 Class .... .......... Osteichthyes Ground

  9. Loci associated with resistance to stripe rust (Puccinia striiformis f. sp. tritici) in a core collection of spring wheat (Triticum aestivum)

    Science.gov (United States)

    Bulli, Peter; Rynearson, Sheri; Chen, Xianming; Pumphrey, Michael

    2017-01-01

    Stripe rust, caused by Puccinia striiformis Westend. f. sp. tritici Erikss. (Pst) remains one of the most significant diseases of wheat worldwide. We investigated stripe rust resistance by genome-wide association analysis (GWAS) in 959 spring wheat accessions from the United States Department of Agriculture-Agricultural Research Service National Small Grains Collection, representing major global production environments. The panel was characterized for field resistance in multi-environment field trials and seedling resistance under greenhouse conditions. A genome-wide set of 5,619 informative SNP markers were used to examine the population structure, linkage disequilibrium and marker-trait associations in the germplasm panel. Based on model-based analysis of population structure and hierarchical Ward clustering algorithm, the accessions were clustered into two major subgroups. These subgroups were largely separated according to geographic origin and improvement status of the accessions. A significant correlation was observed between the population sub-clusters and response to stripe rust infection. We identified 11 and 7 genomic regions with significant associations with stripe rust resistance at adult plant and seedling stages, respectively, based on a false discovery rate multiple correction method. The regions harboring all, except three, of the QTL identified from the field and greenhouse studies overlap with positions of previously reported QTL. Further work should aim at validating the identified QTL using proper germplasm and populations to enhance their utility in marker assisted breeding. PMID:28591221

  10. Host plant records of the White Striped Fruit Fly, Bactrocera (Bactrocera) albistrigata(de Meijere,1911)(Diptera: Tephritidae), Version 1.0

    Science.gov (United States)

    Bactrocera (Bactrocera) albistrigata (de Meijere, 1911), commonly known as the white striped fruit fly, is regulated through the Plant Protection Act of 2000 (7 U.S.C. 7701-7772) and relevant Parts and Subparts of the Code of Federal Regulations (7 CFR – Agriculture). While considered an obscure min...

  11. Reducing Striping and Near Field Response Influence in the MODIS 1.38um Cirrus Detection Band.

    Science.gov (United States)

    Ackerman, S. A.; Moeller, C. C.; Frey, R. A.; Gumley, L. E.; Menzel, W. P.

    2002-05-01

    Since first light in February 2000, the MODIS L1B data from Terra has exhibited detector striping in the cirrus detection band at 1.38 um (B26). This band's unique characteristic is that it is potentially able to discriminate very thin cirrus (optical depth of 0.1) because water vapor absorption effectively attenuates the upwelling signal from the earth's surface, leaving a flat dark background underneath the thin cirrus. The striping has diminished the power of this band for detecting thin cirrus in the MODIS Cloud Mask (MOD35) over the global environment by imparting a structure on the background. The striping amplitude (valley to peak) is 10 - 15% of the MODIS Ltyp radiance in B26 over land backgrounds, thus exceeding the 5% radiance prelaunch accuracy specification for the band. Also unexpected has been the presence of earth surface reflectance in B26. Forward model calculations indicate that the two-way transmittance of B26 in-band (1% to 1% response) should be water (TPW) exceeds about 12 mm. However, MODIS B26 imagery has routinely shown land surface reflectance, such as Florida, even in very moist (TPW > 30 mm) tropical air masses. MODIS prelaunch test data suggests that a near field response (NFR) at about 1.3 um in the B26 filter may be contributing to this behavior. A destriping and out-of-band correction algorithm has been under development at the University of Wisconsin to address the these issues. The simple linear algorithm is based on tuning detector dependent influence coefficients for B26 as a function of B5 (1.24 um) radiance so that the corrected B26 radiance is near zero for all B26 detectors in moist atmospheric conditions. B5 was chosen as a surrogate to characterize the NFR leak in the B26 filter because of its close spectral proximity to the NFR leak. Real MODIS L1B data is being used to estimate the influence coefficients. The paper will describe the B5 based destriping and NFR correction algorithm and influence coefficient development. It

  12. An ovary transcriptome for all maturational stages of the striped bass (Morone saxatilis, a highly advanced perciform fish

    Directory of Open Access Journals (Sweden)

    Reading Benjamin J

    2012-02-01

    Full Text Available Abstract Background The striped bass and its relatives (genus Morone are important fisheries and aquaculture species native to estuaries and rivers of the Atlantic coast and Gulf of Mexico in North America. To open avenues of gene expression research on reproduction and breeding of striped bass, we generated a collection of expressed sequence tags (ESTs from a complementary DNA (cDNA library representative of their ovarian transcriptome. Results Sequences of a total of 230,151 ESTs (51,259,448 bp were acquired by Roche 454 pyrosequencing of cDNA pooled from ovarian tissues obtained at all stages of oocyte growth, at ovulation (eggs, and during preovulatory atresia. Quality filtering of ESTs allowed assembly of 11,208 high-quality contigs ≥ 100 bp, including 2,984 contigs 500 bp or longer (average length 895 bp. Blastx comparisons revealed 5,482 gene orthologues (E-value -3, of which 4,120 (36.7% of total contigs were annotated with Gene Ontology terms (E-value -6. There were 5,726 remaining unknown unique sequences (51.1% of total contigs. All of the high-quality EST sequences are available in the National Center for Biotechnology Information (NCBI Short Read Archive (GenBank: SRX007394. Informative contigs were considered to be abundant if they were assembled from groups of ESTs comprising ≥ 0.15% of the total short read sequences (≥ 345 reads/contig. Approximately 52.5% of these abundant contigs were predicted to have predominant ovary expression through digital differential display in silico comparisons to zebrafish (Danio rerio UniGene orthologues. Over 1,300 Gene Ontology terms from Biological Process classes of Reproduction, Reproductive process, and Developmental process were assigned to this collection of annotated contigs. Conclusions This first large reference sequence database available for the ecologically and economically important temperate basses (genus Morone provides a foundation for gene expression studies in these

  13. Alternative reproductive tactics in female striped mice: heavier females are more likely to breed solitarily than communally.

    Science.gov (United States)

    Hill, Davina L; Pillay, Neville; Schradin, Carsten

    2015-11-01

    Alternative reproductive tactics (ARTs) are discrete reproductive phenotypes governed by decision rules called strategies. ARTs are fixed for life in species with alternative strategies, while tactic expression is plastic in species with a single strategy. ARTs have been investigated in males of many species, but few studies have tested whether the same theoretical framework applies in females. Female striped mice (Rhabdomys pumilio) employ three ARTs: communal breeders give birth in a nest shared with female kin and a breeding male and show allo-parental care; returners give birth away from the shared nest and later return to it; and solitary breeders give birth away from the shared nest and do not return to the group. Here, studying free-living female striped mice over six breeding seasons, we tested whether ARTs arise from alternative strategies or a single strategy. We also asked to what extent stochastic extrinsic factors explain whether individuals become solitary rather than group living. Females switched tactics, consistent with a single strategy, so we tested whether this represented a mixed or conditional single strategy. Only the latter predicts differences between ARTs in traits indicating competitive ability, such as body mass or age, before individuals adopt a tactic. We weighed females at conception when they were still group living to eliminate potential confounding effects of gestation and subsequent social tactic (solitary versus group living) on body mass. Females that went on to use a solitary ART were heavier than those that became communal breeders and returners, in support of a conditional strategy. Solitary breeders also arose through extrinsic factors (mortality of all adult female group members). They weighed less than females that became solitary while relatives were alive, but did not differ in body mass from communal breeders and returners. We conclude that ART theory applies to both sexes, with female striped mice following a

  14. Occurrence of white striping and wooden breast in broilers fed grower and finisher diets with increasing lysine levels.

    Science.gov (United States)

    Cruz, R F A; Vieira, S L; Kindlein, L; Kipper, M; Cemin, H S; Rauber, S M

    2017-02-01

    Two experiments were conducted to evaluate the prevalence and severity of white striping (WS) and wooden breast (WB) in breast fillets from broilers fed diets with increasing digestible Lysine (dLys) from 12 to 28 d (Exp. 1) and from 28 to 42 d (Exp. 2). Trials were sequentially conducted using one-d-old male, slow-feathering Cobb 500 × Cobb broilers, both with 6 treatments and 8 replicates. Increasing dLys levels were equally spaced from 0.77 to 1.17% in Exp. 1 and from 0.68 to 1.07% in Exp. 2. The lowest dLys diet was not supplemented with L-Lysine (L-Lys) in either one of the studies and all other essential amino acid (AA) met or exceeded current commercial recommendations such that their dietary concentrations did not limit broiler growth. Four birds per pen were randomly selected from each replication and processed at 35 and 42 d in Exp. 1 and Exp. 2, respectively. Deboned breast fillets (Pectoralis major) were submitted to a 3 subject panel evaluation to detect the presence of WS and WB, as well as to provide scores of WS (0-normal, 1-moderate, 2-severe) and WB (0-normal, 1-moderate light, 2-moderate, 3-severe). Increasing the level of dLys had a positive effect on BW, carcass, and breast weight, as well as breast yield. White striping and WB prevalences were 32.3 and 85.9% in Exp. 1 and 87.1 and 89.2% in Exp. 2. Birds fed diets not supplemented with L-Lys had the lowest average WS and WB scores (0.22 and 0.78 in Exp. 1 and 0.61 and 0.68 in Exp. 2). White striping and WB presented linear responses to performance variables in Exp. 1, whereas quadratic responses were observed for all variables in Exp. 2. In conclusion, increasing the level of dLys improved growth performance and carcass traits as well as induced the occurrence and severity of WS and WB lesions. © 2016 Poultry Science Association Inc.

  15. Selection of reference genes for quantitative RT-PCR studies in striped dolphin (Stenella coeruleoalba skin biopsies

    Directory of Open Access Journals (Sweden)

    Casini Silvia

    2006-09-01

    Full Text Available Abstract Background Odontocete cetaceans occupy the top position of the marine food-web and are particularly sensitive to the bioaccumulation of lipophilic contaminants. The effects of environmental pollution on these species are highly debated and various ecotoxicological studies have addressed the impact of xenobiotic compounds on marine mammals, raising conservational concerns. Despite its sensitivity, quantitative real-time PCR (qRT-PCR has never been used to quantify gene induction caused by exposure of cetaceans to contaminants. A limitation for the application of qRT-PCR is the need for appropriate reference genes which allow the correct quantification of gene expression. A systematic evaluation of potential reference genes in cetacean skin biopsies is presented, in order to validate future qRT-PCR studies aiming at using the expression of selected genes as non-lethal biomarkers. Results Ten commonly used housekeeping genes (HKGs were partially sequenced in the striped dolphin (Stenella coeruleoalba and, for each gene, PCR primer pairs were specifically designed and tested in qRT-PCR assays. The expression of these potential control genes was examined in 30 striped dolphin skin biopsy samples, obtained from specimens sampled in the north-western Mediterranean Sea. The stability of selected control genes was determined using three different specific VBA applets (geNorm, NormFinder and BestKeeper which produce highly comparable results. Glyceraldehyde-3P-dehydrogenase (GAPDH and tyrosine 3-monooxygenase (YWHAZ always rank as the two most stably expressed HKGs according to the analysis with geNorm and Normfinder, and are defined as optimal control genes by BestKepeer. Ribosomal protein L4 (RPL4 and S18 (RPS18 also exhibit a remarkable stability of their expression levels. On the other hand, transferrin receptor (TFRC, phosphoglycerate kinase 1 (PGK1, hypoxanthine ribosyltransferase (HPRT1 and β-2-microglobin (B2M show variable expression

  16. A novel method to develop an otolith microchemistry model to determine striped bass habitat use in the San Francisco Estuary

    Energy Technology Data Exchange (ETDEWEB)

    Phillis, C C; Ostrach, D J; Gras, M; Yin, Q; Ingram, B L; Zinkl, J G; Weber, P K

    2006-06-14

    Otolith Sr/Ca has become a popular tool for hind casting habitat utilization and migration histories of euryhaline fish. It can readily identify habitat shifts of diadromous fish in most systems. Inferring movements of fish within estuarine habitat, however, requires a model of that accounts of the local water chemistry and the response of individual species to that water chemistry, which is poorly understood. Modeling is further complicated by the fact that high marine Sr and Ca concentrations results in a rapid, nonlinear increase in water Sr/Ca and {sup 87}Sr/{sup 86}Sr between fresh and marine waters. Here we demonstrate a novel method for developing a salinity-otolith Sr/Ca model for the purpose of reconstructing striped bass (Morone saxatilis) habitat use in the San Francisco Bay estuary. We used correlated Sr/Ca and {sup 87}Sr/{sup 86}Sr ratios measurements from adult otoliths from striped bass that experienced a range of salinities to infer striped bass otolith Sr/Ca response to changes in salinity and water Sr/Ca ratio. Otolith {sup 87}Sr/{sup 86}Sr can be assumed to accurately record water {sup 87}Sr/{sup 86}Sr because there is no biological fractionation of Sr isotopes. Water {sup 87}Sr/{sup 86}Sr can in turn be used to estimate water salinity based on the mixing of fresh and marine water with known {sup 87}Sr/{sup 86}Sr ratios. The relationship between adjacent analyses on otoliths of Sr/Ca and {sup 87}Sr/{sup 86}Sr by LA-ICP-MS and MC-ICP-MS (r{sup 2} = 0.65, n = 66) is used to predict water salinity from a measured Sr/Ca ratio. The nature of this non-linear model lends itself well to identifying residence in the Delta and to a lesser extent Suisun Bay, but does not do well locating residence within the more saline bays west of Carquinez Strait. An increase in the number of analyses would improve model confidence, but ultimately the precision of the model is limited by the variability in the response of individual fish to water Sr/Ca.

  17. Quantitative trait loci for resistance to stripe rust of wheat revealed using global field nurseries and opportunities for stacking resistance genes.

    Science.gov (United States)

    Bokore, Firdissa E; Cuthbert, Richard D; Knox, Ron E; Randhawa, Harpinder S; Hiebert, Colin W; DePauw, Ron M; Singh, Asheesh K; Singh, Arti; Sharpe, Andrew G; N'Diaye, Amidou; Pozniak, Curtis J; McCartney, Curt; Ruan, Yuefeng; Berraies, Samia; Meyer, Brad; Munro, Catherine; Hay, Andy; Ammar, Karim; Huerta-Espino, Julio; Bhavani, Sridhar

    2017-12-01

    Quantitative trait loci controlling stripe rust resistance were identified in adapted Canadian spring wheat cultivars providing opportunity for breeders to stack loci using marker-assisted breeding. Stripe rust or yellow rust, caused by Puccinia striiformis Westend. f. sp. tritici Erikss., is a devastating disease of common wheat (Triticum aestivum L.) in many regions of the world. The objectives of this research were to identify and map quantitative trait loci (QTL) associated with stripe rust resistance in adapted Canadian spring wheat cultivars that are effective globally, and investigate opportunities for stacking resistance. Doubled haploid (DH) populations from the crosses Vesper/Lillian, Vesper/Stettler, Carberry/Vesper, Stettler/Red Fife and Carberry/AC Cadillac were phenotyped for stripe rust severity and infection response in field nurseries in Canada (Lethbridge and Swift Current), New Zealand (Lincoln), Mexico (Toluca) and Kenya (Njoro), and genotyped with SNP markers. Six QTL for stripe rust resistance in the population of Vesper/Lillian, five in Vesper/Stettler, seven in Stettler/Red Fife, four in Carberry/Vesper and nine in Carberry/AC Cadillac were identified. Lillian contributed stripe rust resistance QTL on chromosomes 4B, 5A, 6B and 7D, AC Cadillac on 2A, 2B, 3B and 5B, Carberry on 1A, 1B, 4A, 4B, 7A and 7D, Stettler on 1A, 2A, 3D, 4A, 5B and 6A, Red Fife on 2D, 3B and 4B, and Vesper on 1B, 2B and 7A. QTL on 1A, 1B, 2A, 2B, 3B, 4A, 4B, 5B, 7A and 7D were observed in multiple parents. The populations are compelling sources of recombination of many stripe rust resistance QTL for stacking disease resistance. Gene pyramiding should be possible with little chance of linkage drag of detrimental genes as the source parents were mostly adapted cultivars widely grown in Canada.

  18. TaLHY, a 1R-MYB Transcription Factor, Plays an Important Role in Disease Resistance against Stripe Rust Fungus and Ear Heading in Wheat.

    Science.gov (United States)

    Zhang, Zijin; Chen, Jieming; Su, Yongying; Liu, Hanmei; Chen, Yanger; Luo, Peigao; Du, Xiaogang; Wang, Dan; Zhang, Huaiyu

    2015-01-01

    LHY (late elongated hypocotyl) is an important gene that regulates and controls biological rhythms in plants. Additionally, LHY is highly expressed in the SSH (suppression subtractive hybridization) cDNA library-induced stripe rust pathogen (CYR32) in our previous research. To identify the function of the LHY gene in disease resistance against stripe rust, we used RACE-PCR technology to clone TaLHY in the wheat variety Chuannong19. The cDNA of TaLHY is 3085 bp long with an open reading frame of 1947 bp. TaLHY is speculated to encode a 70.3 kDa protein of 648 amino acids , which has one typical plant MYB-DNA binding domain; additionally, phylogenetic tree shows that TaLHY has the highest homology with LHY of Brachypodium distachyon(BdLHY-like). Quantitative fluorescence PCR indicates that TaLHY has higher expression in the leaf, ear and stem of wheat but lower expression in the root. Infestation of CYR32 can result in up-regulated expression of TaLHY, peaking at 72 h. Using VIGS (virus-induced gene silencing) technology to disease-resistant wheat in the fourth leaf stage, plants with silenced TaLHY cannot complete their heading stage. Through the compatible interaction with the stripe rust physiological race CYR32, Chuannong 19 loses its immune capability toward the stripe rust pathogen, indicating that TaLHY may regulate and participate in the heading of wheat, as well as the defense responses against stripe rust infection.

  19. TaLHY, a 1R-MYB Transcription Factor, Plays an Important Role in Disease Resistance against Stripe Rust Fungus and Ear Heading in Wheat.

    Directory of Open Access Journals (Sweden)

    Zijin Zhang

    Full Text Available LHY (late elongated hypocotyl is an important gene that regulates and controls biological rhythms in plants. Additionally, LHY is highly expressed in the SSH (suppression subtractive hybridization cDNA library-induced stripe rust pathogen (CYR32 in our previous research. To identify the function of the LHY gene in disease resistance against stripe rust, we used RACE-PCR technology to clone TaLHY in the wheat variety Chuannong19. The cDNA of TaLHY is 3085 bp long with an open reading frame of 1947 bp. TaLHY is speculated to encode a 70.3 kDa protein of 648 amino acids , which has one typical plant MYB-DNA binding domain; additionally, phylogenetic tree shows that TaLHY has the highest homology with LHY of Brachypodium distachyon(BdLHY-like. Quantitative fluorescence PCR indicates that TaLHY has higher expression in the leaf, ear and stem of wheat but lower expression in the root. Infestation of CYR32 can result in up-regulated expression of TaLHY, peaking at 72 h. Using VIGS (virus-induced gene silencing technology to disease-resistant wheat in the fourth leaf stage, plants with silenced TaLHY cannot complete their heading stage. Through the compatible interaction with the stripe rust physiological race CYR32, Chuannong 19 loses its immune capability toward the stripe rust pathogen, indicating that TaLHY may regulate and participate in the heading of wheat, as well as the defense responses against stripe rust infection.

  20. Identification of QTL conferring resistance to stripe rust (Puccinia striiformis f. sp. hordei) and leaf rust (Puccinia hordei) in barley using nested association mapping (NAM).

    Science.gov (United States)

    Vatter, Thomas; Maurer, Andreas; Perovic, Dragan; Kopahnke, Doris; Pillen, Klaus; Ordon, Frank

    2018-01-01

    The biotrophic rust fungi Puccinia hordei and Puccinia striiformis are important barley pathogens with the potential to cause high yield losses through an epidemic spread. The identification of QTL conferring resistance to these pathogens is the basis for targeted breeding approaches aiming to improve stripe rust and leaf rust resistance of modern cultivars. Exploiting the allelic richness of wild barley accessions proved to be a valuable tool to broaden the genetic base of resistance of barley cultivars. In this study, SNP-based nested association mapping (NAM) was performed to map stripe rust and leaf rust resistance QTL in the barley NAM population HEB-25, comprising 1,420 lines derived from BC1S3 generation. By scoring the percentage of infected leaf area, followed by calculation of the area under the disease progress curve and the average ordinate during a two-year field trial, a large variability of resistance across and within HEB-25 families was observed. NAM based on 5,715 informative SNPs resulted in the identification of twelve and eleven robust QTL for resistance against stripe rust and leaf rust, respectively. Out of these, eight QTL for stripe rust and two QTL for leaf rust are considered novel showing no overlap with previously reported resistance QTL. Overall, resistance to both pathogens in HEB-25 is most likely due to the accumulation of numerous small effect loci. In addition, the NAM results indicate that the 25 wild donor QTL alleles present in HEB-25 strongly differ in regard to their individual effect on rust resistance. In future, the NAM concept will allow to select and combine individual wild barley alleles from different HEB parents to increase rust resistance in barley. The HEB-25 results will support to unravel the genetic basis of rust resistance in barley, and to improve resistance against stripe rust and leaf rust of modern barley cultivars.

  1. Genome-wide association mapping reveals a rich genetic architecture of stripe rust resistance loci in emmer wheat (Triticum turgidum ssp. dicoccum).

    Science.gov (United States)

    Liu, Weizhen; Maccaferri, Marco; Chen, Xianming; Laghetti, Gaetano; Pignone, Domenico; Pumphrey, Michael; Tuberosa, Roberto

    2017-11-01

    SNP-based genome scanning in worldwide domesticated emmer germplasm showed high genetic diversity, rapid linkage disequilibrium decay and 51 loci for stripe rust resistance, a large proportion of which were novel. Cultivated emmer wheat (Triticum turgidum ssp. dicoccum), one of the oldest domesticated crops in the world, is a potentially rich reservoir of variation for improvement of resistance/tolerance to biotic and abiotic stresses in wheat. Resistance to stripe rust (Puccinia striiformis f. sp. tritici) in emmer wheat has been under-investigated. Here, we employed genome-wide association (GWAS) mapping with a mixed linear model to dissect effective stripe rust resistance loci in a worldwide collection of 176 cultivated emmer wheat accessions. Adult plants were tested in six environments and seedlings were evaluated with five races from the United States and one from Italy under greenhouse conditions. Five accessions were resistant across all experiments. The panel was genotyped with the wheat 90,000 Illumina iSelect single nucleotide polymorphism (SNP) array and 5106 polymorphic SNP markers with mapped positions were obtained. A high level of genetic diversity and fast linkage disequilibrium decay were observed. In total, we identified 14 loci associated with field resistance in multiple environments. Thirty-seven loci were significantly associated with all-stage (seedling) resistance and six of them were effective against multiple races. Of the 51 total loci, 29 were mapped distantly from previously reported stripe rust resistance genes or quantitative trait loci and represent newly discovered resistance loci. Our results suggest that GWAS is an effective method for characterizing genes in cultivated emmer wheat and confirm that emmer wheat is a rich source of stripe rust resistance loci that can be used for wheat improvement.

  2. Identification of QTL conferring resistance to stripe rust (Puccinia striiformis f. sp. hordei) and leaf rust (Puccinia hordei) in barley using nested association mapping (NAM)

    Science.gov (United States)

    Vatter, Thomas; Maurer, Andreas; Perovic, Dragan; Kopahnke, Doris; Pillen, Klaus

    2018-01-01

    The biotrophic rust fungi Puccinia hordei and Puccinia striiformis are important barley pathogens with the potential to cause high yield losses through an epidemic spread. The identification of QTL conferring resistance to these pathogens is the basis for targeted breeding approaches aiming to improve stripe rust and leaf rust resistance of modern cultivars. Exploiting the allelic richness of wild barley accessions proved to be a valuable tool to broaden the genetic base of resistance of barley cultivars. In this study, SNP-based nested association mapping (NAM) was performed to map stripe rust and leaf rust resistance QTL in the barley NAM population HEB-25, comprising 1,420 lines derived from BC1S3 generation. By scoring the percentage of infected leaf area, followed by calculation of the area under the disease progress curve and the average ordinate during a two-year field trial, a large variability of resistance across and within HEB-25 families was observed. NAM based on 5,715 informative SNPs resulted in the identification of twelve and eleven robust QTL for resistance against stripe rust and leaf rust, respectively. Out of these, eight QTL for stripe rust and two QTL for leaf rust are considered novel showing no overlap with previously reported resistance QTL. Overall, resistance to both pathogens in HEB-25 is most likely due to the accumulation of numerous small effect loci. In addition, the NAM results indicate that the 25 wild donor QTL alleles present in HEB-25 strongly differ in regard to their individual effect on rust resistance. In future, the NAM concept will allow to select and combine individual wild barley alleles from different HEB parents to increase rust resistance in barley. The HEB-25 results will support to unravel the genetic basis of rust resistance in barley, and to improve resistance against stripe rust and leaf rust of modern barley cultivars. PMID:29370232

  3. Identification of QTL conferring resistance to stripe rust (Puccinia striiformis f. sp. hordei and leaf rust (Puccinia hordei in barley using nested association mapping (NAM.

    Directory of Open Access Journals (Sweden)

    Thomas Vatter

    Full Text Available The biotrophic rust fungi Puccinia hordei and Puccinia striiformis are important barley pathogens with the potential to cause high yield losses through an epidemic spread. The identification of QTL conferring resistance to these pathogens is the basis for targeted breeding approaches aiming to improve stripe rust and leaf rust resistance of modern cultivars. Exploiting the allelic richness of wild barley accessions proved to be a valuable tool to broaden the genetic base of resistance of barley cultivars. In this study, SNP-based nested association mapping (NAM was performed to map stripe rust and leaf rust resistance QTL in the barley NAM population HEB-25, comprising 1,420 lines derived from BC1S3 generation. By scoring the percentage of infected leaf area, followed by calculation of the area under the disease progress curve and the average ordinate during a two-year field trial, a large variability of resistance across and within HEB-25 families was observed. NAM based on 5,715 informative SNPs resulted in the identification of twelve and eleven robust QTL for resistance against stripe rust and leaf rust, respectively. Out of these, eight QTL for stripe rust and two QTL for leaf rust are considered novel showing no overlap with previously reported resistance QTL. Overall, resistance to both pathogens in HEB-25 is most likely due to the accumulation of numerous small effect loci. In addition, the NAM results indicate that the 25 wild donor QTL alleles present in HEB-25 strongly differ in regard to their individual effect on rust resistance. In future, the NAM concept will allow to select and combine individual wild barley alleles from different HEB parents to increase rust resistance in barley. The HEB-25 results will support to unravel the genetic basis of rust resistance in barley, and to improve resistance against stripe rust and leaf rust of modern barley cultivars.

  4. Genome-Wide Linkage Mapping of QTL for Adult-Plant Resistance to Stripe Rust in a Chinese Wheat Population Linmai 2 × Zhong 892.

    Directory of Open Access Journals (Sweden)

    Jindong Liu

    Full Text Available Stripe rust is one of the most devastating diseases of wheat (Triticum aestivum worldwide. Adult-plant resistance (APR is an efficient approach to provide long-term protection of wheat from the disease. The Chinese winter wheat cultivar Zhong 892 has a moderate level of APR to stripe rust in the field. To determine the inheritance of the APR resistance in this cultivar, 273 F6 recombinant inbred lines (RILs were developed from a cross between Linmai 2 and Zhong 892. The RILs were evaluated for maximum disease severity (MDS in two sites during the 2011-2012, 2012-2013 and 2013-2014 cropping seasons, providing data for five environments. Illumina 90k SNP (single nucleotide polymorphism chips were used to genotype the RILs and their parents. Composite interval mapping (CIM detected eight QTL, namely QYr.caas-2AL, QYr.caas-2BL.3, QYr.caas-3AS, QYr.caas-3BS, QYr.caas-5DL, QYr.caas-6AL, QYr.caas-7AL and QYr.caas-7DS.1, respectively. All except QYr.caas-2BL.3 resistance alleles were contributed by Zhong 892. QYr.caas-3AS and QYr.caas-3BS conferred stable resistance to stripe rust in all environments, explaining 6.2-17.4% and 5.0-11.5% of the phenotypic variances, respectively. The genome scan of SNP sequences tightly linked to QTL for APR against annotated proteins in wheat and related cereals genomes identified two candidate genes (autophagy-related gene and disease resistance gene RGA1, significantly associated with stripe rust resistance. These QTL and their closely linked SNP markers, in combination with kompetitive allele specific PCR (KASP technology, are potentially useful for improving stripe rust resistances in wheat breeding.

  5. Real-time 3D shape measurement with digital stripe projection by Texas Instruments Micro Mirror Devices DMD

    Science.gov (United States)

    Frankowski, Gottfried; Chen, Mai; Huth, Torsten

    2000-03-01

    The fast, contact-free and highly precise shape measurement of technical objects is of key importance in the scientific- technological area as well as the area of practical measurement technology. The application areas of contact- free surface measurement extend across widely different areas, e.g., the automation of production processes, the measurement and inspection of components in microsystem technology or the fast 3D in-vivo measurement of human skin surfaces in cosmetics and medical technology. This paper describes methodological and technological possibilities as well as measurement technology applications for fast optical 3D shape measurements using micromirror-based high-velocity stripe projection. Depending on the available projector and camera facilities, it will be possible to shoot and evaluate compete 3D surface profiles within only a few milliseconds.

  6. Genetic evidence for polygynandry in the black-striped pipefish Syngnathus abaster: a microsatellite-based parentage analysis.

    Science.gov (United States)

    Hübner, Kerstin; Gonzalez-Wanguemert, Mercedes; Diekmann, Onno E; Serrão, Ester A

    2013-01-01

    Sexual selection theory predicts that, in organisms with reversed sex roles, more polyandrous species exhibit higher levels of sexual dimorphism. In the family Syngnathidae (pipefish, seahorses, and seadragons), males provide all parental care by carrying developing embryos on their ventral surfaces, and females develop secondary sex characters. Syngnathids exhibit a variety of genetic mating patterns, making them an ideal group to test predictions of sexual selection theory. Here, we describe the mating system of the black-striped pipefish Syngnathus abaster, using 4 highly variable microsatellites to analyze parentage of 102 embryos. Results revealed that 1) both sexes mate multiple times over the course of a pregnancy (polygynandrous mating system), 2) eggs are spatially segregated by maternity within each brood pouch, and 3) larger females have higher mating success (Kolmogorov-Smirnov test; P sexual dimorphism.

  7. Electron beam irradiation, oxygen, and temperature effects on nucleotide degradation in stored aquaculture hybrid striped bass fillets

    International Nuclear Information System (INIS)

    Karahadian, C.; Brannan, R.G.; Heath, J.L.

    1997-01-01

    Skinless fillets from commercially-grown aquaculture hybrid striped bass (Morone saxatilis x M. chrysops) were electron beam-irradiated in the presence of air or vacuum-packaged and stored at 4C and -20C for 14 days. A mean low dose level of 2.0 or 3.0 kGy (+/- 0.5 kGy) and high dose level of 20 kGy (+/- 4 kGy) were used for irradiated samples. Hypoxanthine (Hx) concentrations, Ki-values ([(INO + Hx)/(IMP + INO + Hx)] x 100), and H-values ([(Hx)/(IMP + INO + Hx)] x 100) indicated that irradiation did not influence the rate of nucleotide degradation compared with nonirradiated controls at either refrigerated or frozen temperatures. Vacuum packaging or freezing of stored samples resulted in lower H-values and Hx contents compared with nonirradiated controls regardless of irradiation treatment

  8. The development of quick, robust, quantitative phenotypic assays for describing the host-nonhost landscape to stripe rust.

    Science.gov (United States)

    Dawson, Andrew M; Bettgenhaeuser, Jan; Gardiner, Matthew; Green, Phon; Hernández-Pinzón, Inmaculada; Hubbard, Amelia; Moscou, Matthew J

    2015-01-01

    Nonhost resistance is often conceptualized as a qualitative separation from host resistance. Classification into these two states is generally facile, as they fail to fully describe the range of states that exist in the transition from host to nonhost. This poses a problem when studying pathosystems that cannot be classified as either host or nonhost due to their intermediate status relative to these two extremes. In this study, we investigate the efficacy of the Poaceae-stripe rust (Puccinia striiformis Westend.) interaction for describing the host-nonhost landscape. First, using barley (Hordeum vulgare L.) and Brachypodium distachyon (L.) P. Beauv. We observed that macroscopic symptoms of chlorosis and leaf browning were associated with hyphal colonization by P. striiformis f. sp. tritici, respectively. This prompted us to adapt a protocol for visualizing fungal structures into a phenotypic assay that estimates the percent of leaf colonized. Use of this assay in intermediate host and intermediate nonhost systems found the frequency of infection decreases with evolutionary divergence from the host species. Similarly, we observed that the pathogen's ability to complete its life cycle decreased faster than its ability to colonize leaf tissue, with no incidence of pustules observed in the intermediate nonhost system and significantly reduced pustule formation in the intermediate host system as compared to the host system, barley-P. striiformis f. sp. hordei. By leveraging the stripe rust pathosystem in conjunction with macroscopic and microscopic phenotypic assays, we now hope to dissect the genetic architecture of intermediate host and intermediate nonhost resistance using structured populations in barley and B. distachyon.

  9. Cytogenetic study and stripe rust response of the derivatives from a wheat - Thinopyrum intermedium - Psathyrostachys huashanica trigeneric hybrid.

    Science.gov (United States)

    Kang, Hou-Yang; Tang, Lin; Li, Dai-Yan; Diao, Cheng-Dou; Zhu, Wei; Tang, Yao; Wang, Yi; Fan, Xing; Xu, Li-Li; Zeng, Jian; Sha, Li-Na; Yu, Xiao-Fang; Zhang, Hai-Qin; Zhou, Yong-Hong

    2017-05-01

    To transfer multiple desirable alien genes into common wheat, we previously reported a new trigeneric hybrid synthesized by crossing a wheat - Thinopyrum intermedium partial amphiploid with wheat - Psathyrostachys huashanica amphiploid. Here, the meiotic behavior, chromosome constitution, and stripe rust resistance of F 5 derivatives from the wheat - Th. intermedium - P. huashanica trigeneric hybrid were studied. Cytological analysis indicated the F 5 progenies had chromosome numbers of 42-50 (average 44.96). The mean meiotic configuration was 1.28 univalents, 21.74 bivalents, 0.04 trivalents, and 0.02 tetravalents per pollen mother cell. In 2n = 42 lines, the average pairing configuration was 0.05 I + 19.91 II (ring) + 1.06 II (rod) + 0.003 IV, suggesting these lines were cytologically stable. Most lines with 2n = 43, 44, 46, 48, or 50, bearing a high frequency of univalents or multivalents, showed abnormal meiotic behavior. Genomic in situ hybridization karyotyping results revealed that 25 lines contained 1-7 Th. intermedium chromosomes, but no P. huashanica chromosomes were found among the 27 self-pollinated progenies. At meiosis, univalents (1-5) possessing Th. intermedium hybridization signals were detected in 19 lines. Bivalents (1-3) expressing fluorescence signals were observed in 12 lines. Importantly, 21 lines harbored wheat - Th. intermedium chromosomal translocations with various alien translocation types. Additionally, two homozygous lines, K13-668-10 and K13-682-12, possessed a pair of wheat - Th. intermedium small fragmental translocations. Compared with the recurrent parent Zhong 3, most lines showed high resistance to the stripe rust (Puccinia striiformis f. sp. tritici) pathogens prevalent in China, including race V26/Gui22. This paper reports a highly efficient technical method for inducing alien translocation between wheat and Th. intermedium by trigeneric hybridization. These lines might be potentially valuable germplasm resources for further

  10. Leptin levels in free ranging striped mice (Rhabdomys pumilio) increase when food decreases: the ecological leptin hypothesis.

    Science.gov (United States)

    Schradin, Carsten; Raynaud, Julien; Arrivé, Mathilde; Blanc, Stéphane

    2014-09-15

    Leptin is a hormone informing the body about its fat stores, reducing appetite and foraging and as such reducing fattening of individuals. In laboratory rodents, leptin secretion is highly correlated to the amount of adipose tissue. We compared this to the alternative ecological leptin hypothesis, which based on the behavioural effects of leptin predicts that leptin levels are disassociated from adipose tissue when fattening is of evolutionary advantage to survive coming periods of low food availability. Studying a species that has to survive a dry season with low food availability, we tested the ecological leptin hypothesis, predicting low leptin levels when food availability and thus adiposity is high promoting foraging and fattening, but high leptin levels in the seasons of low food availability, reducing energetic costs due to foraging. We measured leptin levels in 154 samples of free living African striped mice (Rhabdomys pumilio). Striped mice gain significant body mass during the moist season to survive the following dry season with low food availability. We found a strong seasonal effect, with higher leptin levels in the dry season with low food availability, which was in contrast to the hypothesis deriving from studies on laboratory rodents, but in agreement with ecological leptin hypothesis: leptin levels remained low in the period of high food availability, allowing fattening, but increased during periods of low food availability, possibly suppressing energetically costly foraging in an environment where foraging success would have been very low. Leptin correlated significantly and negatively with testosterone levels, and high testosterone levels in the moist season could explain why leptin levels were low even though food availability was high. However, analysing samples from an experimental laboratory study where testosterone levels were increased via implants found no support for a suppressive role of testosterone on leptin. In sum, our study

  11. The development of quick, robust, quantitative phenotypic assays for describing the host-nonhost landscape to stripe rust

    Directory of Open Access Journals (Sweden)

    Andrew Marc Dawson

    2015-10-01

    Full Text Available Nonhost resistance is often conceptualized as a qualitative separation from host resistance. Classification into these two states is generally facile, as they fail to fully describe the range of states that exist in the transition from host to nonhost. This poses a problem when studying pathosystems that cannot be classified as either host or nonhost due to their intermediate status relative to these two extremes. In this study, we investigate the efficacy of the Poaceae-stripe rust (Puccinia striiformis Westend. interaction for describing the host-nonhost landscape. First, using barley (Hordeum vulgare L. and Brachypodium distachyon (L. P. Beauv. we observed that macroscopic symptoms of chlorosis and leaf browning were associated with hyphal colonization by P. striiformis f. sp. tritici, respectively. This prompted us to adapt a protocol for visualizing fungal structures into a phenotypic assay that estimates the percent of leaf colonized. Use of this assay in intermediate host and intermediate nonhost systems found the frequency of infection decreases with evolutionary divergence from the host species. Similarly, we observed that the pathogen’s ability to complete its life cycle decreased faster than its ability to colonize leaf tissue, with no incidence of pustules observed in the intermediate nonhost system and significantly reduced pustule formation in the intermediate host system as compared to the host system, barley-P. striiformis f. sp. hordei. By leveraging the stripe rust pathosystem in conjunction with macroscopic and microscopic phenotypic assays, we now hope to dissect the genetic architecture of intermediate host and intermediate nonhost resistance using structured populations in barley and B. distachyon.

  12. Gapped paramagnetic state in a frustrated spin-1/2 Heisenberg antiferromagnet on the cross-striped square lattice

    Science.gov (United States)

    Li, P. H. Y.; Bishop, R. F.

    2018-03-01

    We implement the coupled cluster method to very high orders of approximation to study the spin-1/2 J1 -J2 Heisenberg model on a cross-striped square lattice. Every nearest-neighbour pair of sites on the square lattice has an isotropic antiferromagnetic exchange bond of strength J1 > 0 , while the basic square plaquettes in alternate columns have either both or neither next-nearest-neighbour (diagonal) pairs of sites connected by an equivalent frustrating bond of strength J2 ≡ αJ1 > 0 . By studying the magnetic order parameter (i.e., the average local on-site magnetization) in the range 0 ≤ α ≤ 1 of the frustration parameter we find that the quasiclassical antiferromagnetic Néel and (so-called) double Néel states form the stable ground-state phases in the respective regions α α1bc = 0.615(5) . The double Néel state has Néel (⋯ ↑↓↑↓ ⋯) ordering along the (column) direction parallel to the stripes of squares with both or no J2 bonds, and spins alternating in a pairwise (⋯ ↑↑↓↓↑↑↓↓ ⋯) fashion along the perpendicular (row) direction, so that the parallel pairs occur on squares with both J2 bonds present. Further explicit calculations of both the triplet spin gap and the zero-field uniform transverse magnetic susceptibility provide compelling evidence that the ground-state phase over all or most of the intermediate regime α1ac state with no discernible long-range magnetic order.

  13. Characterization of molecular diversity and genome-wide mapping of loci associated with resistance to stripe rust and stem rust in Ethiopian bread wheat accessions.

    Science.gov (United States)

    Muleta, Kebede T; Rouse, Matthew N; Rynearson, Sheri; Chen, Xianming; Buta, Bedada G; Pumphrey, Michael O

    2017-08-04

    The narrow genetic basis of resistance in modern wheat cultivars and the strong selection response of pathogen populations have been responsible for periodic and devastating epidemics of the wheat rust diseases. Characterizing new sources of resistance and incorporating multiple genes into elite cultivars is the most widely accepted current mechanism to achieve durable varietal performance against changes in pathogen virulence. Here, we report a high-density molecular characterization and genome-wide association study (GWAS) of stripe rust and stem rust resistance in 190 Ethiopian bread wheat lines based on phenotypic data from multi-environment field trials and seedling resistance screening experiments. A total of 24,281 single nucleotide polymorphism (SNP) markers filtered from the wheat 90 K iSelect genotyping assay was used to survey Ethiopian germplasm for population structure, genetic diversity and marker-trait associations. Upon screening for field resistance to stripe rust in the Pacific Northwest of the United States and Ethiopia over multiple growing seasons, and against multiple races of stripe rust and stem rust at seedling stage, eight accessions displayed resistance to all tested races of stem rust and field resistance to stripe rust in all environments. Our GWAS results show 15 loci were significantly associated with seedling and adult plant resistance to stripe rust at false discovery rate (FDR)-adjusted probability (P) rust in the Ethiopian wheat accessions. Many of the identified resistance loci were mapped close to previously identified rust resistance genes; however, three loci on the short arms of chromosomes 5A and 7B for stripe rust resistance and two on chromosomes 3B and 7B for stem rust resistance may be novel. Our results demonstrate that considerable genetic variation resides within the landrace accessions that can be utilized to broaden the genetic base of rust resistance in wheat breeding germplasm. The molecular markers identified in

  14. Computer code system for the R and D of nuclear fuel cycle with fast reactor. 2. Development and application of analytical evaluation system for thermal striping phenomena

    International Nuclear Information System (INIS)

    Muramatsu, Toshiharu

    2001-01-01

    Fluid-structure thermal interaction phenomena characterized by stationary random temperature fluctuations, namely thermal striping are observed in the downstream region such as a T-junction piping system of liquid metal fast reactors (LMFRs). Therefore, the piping wall located in the downstream region must be protected against the stationary random thermal process, which might induce high-cycle fatigue. This paper describes the evaluation system based on numerical simulation methods consisting of three thermohydraulics computer programs AQUA, DINUS-3 and THEMIS and of three thermomechanical computer programs BEMSET, FINAS and CANIS, for the thermal striping developed at Japan Nuclear Cycle Development Institute (JNC). Verification results for each computer code and the system are also introduced based on out-of-pile experimental data using water and sodium as working fluids. (author)

  15. Cloning and characterization of leptin in a Perciform fish, the striped bass (Morone saxatilis): control of feeding and regulation by nutritional state.

    Science.gov (United States)

    Won, Eugene T; Baltzegar, David A; Picha, Matthew E; Borski, Russell J

    2012-08-01

    In mammals, leptin is an anorexigenic peptide hormone that regulates energy homeostasis. It is produced predominantly by white adipose tissue and circulates as an endocrine indicator of energy reserves. Teleost leptin has been characterized in a few fish species, but its regulation is not well understood, particularly in response to nutritional status. In this study, we cloned a putative leptin in striped bass (Morone saxatilis) and report the first characterization of leptin in a Perciforme, the largest and most diverse order of fish. The striped bass leptin coding sequence was 65% homologous with pufferfish, 52% with Atlantic salmon, and 46% with human. PCR showed that leptin mRNA was exclusively expressed in the liver, and not adipose or other tissues. The leptin coding sequence of striped bass and the more widely cultured hybrid striped bass variety (HSB; Morone chrysops, white bass×M. saxatilis) were identical. We then evaluated whether the metabolic status of HSB might alter leptin gene expression. Juvenile HSB were subjected to 3weeks feed deprivation followed by 3weeks of refeeding. Quantitative PCR showed that fasting for 3weeks reduced hepatic leptin mRNA levels relative to fed controls. Leptin mRNA levels then increased upon refeeding, albeit levels were not completely restored to those seen in control fish fed throughout the experiment. Intraperitoneal injection of human leptin suppressed appetite in HSB. In as much as hepatic HSB leptin mRNA is regulated by nutritional state and has a corresponding anorexigenic effect, our results suggest that leptin may play a role in energy homeostasis in these advanced Perciformes. Copyright © 2012 Elsevier Inc. All rights reserved.

  16. Isolation and molecular cytogenetic characterization of a wheat - Leymus mollis double monosomic addition line and its progenies with resistance to stripe rust.

    Science.gov (United States)

    Yang, Xiaofei; Li, Xin; Wang, Changyou; Chen, Chunhuan; Tian, Zengrong; Ji, Wanquan

    2017-12-01

    A common wheat - Leymus mollis (2n = 4x = 28, NsNsXmXm) double monosomic addition line, M11003-4-3-8/13/15 (2n = 44 = 42T.a + L.m2 + L.m3), with stripe rust resistance was developed (where T.a represents Triticum aestivum chromosome, L.m represents L. mollis chromosome, and L.m2/3 represents L. mollis chromosome of homoeologous groups 2 and 3). The progenies of line M11003-4-3-8/13/15 were characterized by cytological observation, specific molecular markers, fluorescence in situ hybridization (FISH), and genomic in situ hybridization (GISH). Among the progenies, there existed five different types (I, II, III, IV, and V) of chromosome constitution, the formulas of which were 2n = 44 = 42T.a + 1L.m2 + 1L.m3, 2n = 43 = 42T.a + 1L.m2, 2n = 43 = 42T.a + 1L.m3, 2n = 42 = 42T.a, and 2n = 44 = 42T.a + 2L.m2, respectively. Field disease screening showed that types I and III showed high resistance to stripe rust, while types II, IV, and V were susceptible. Leymus mollis was almost immune to stripe rust, whereas the wheat parent, cultivar 7182, was susceptible. Therefore, we concluded that the stripe rust resistance originated from L. mollis. These various lines could be further fully exploited as important disease resistance materials to enrich wheat genetic resources.

  17. Identification and Severity Determination of Wheat Stripe Rust and Wheat Leaf Rust Based on Hyperspectral Data Acquired Using a Black-Paper-Based Measuring Method

    Science.gov (United States)

    Ruan, Liu; Wang, Rui; Liu, Qi; Ma, Zhanhong; Li, Xiaolong; Cheng, Pei; Wang, Haiguang

    2016-01-01

    It is important to implement detection and assessment of plant diseases based on remotely sensed data for disease monitoring and control. Hyperspectral data of healthy leaves, leaves in incubation period and leaves in diseased period of wheat stripe rust and wheat leaf rust were collected under in-field conditions using a black-paper-based measuring method developed in this study. After data preprocessing, the models to identify the diseases were built using distinguished partial least squares (DPLS) and support vector machine (SVM), and the disease severity inversion models of stripe rust and the disease severity inversion models of leaf rust were built using quantitative partial least squares (QPLS) and support vector regression (SVR). All the models were validated by using leave-one-out cross validation and external validation. The diseases could be discriminated using both distinguished partial least squares and support vector machine with the accuracies of more than 99%. For each wheat rust, disease severity levels were accurately retrieved using both the optimal QPLS models and the optimal SVR models with the coefficients of determination (R2) of more than 0.90 and the root mean square errors (RMSE) of less than 0.15. The results demonstrated that identification and severity evaluation of stripe rust and leaf rust at the leaf level could be implemented based on the hyperspectral data acquired using the developed method. A scientific basis was provided for implementing disease monitoring by using aerial and space remote sensing technologies. PMID:27128464

  18. Did transmission of Helicobacter pylori from humans cause a disease outbreak in a colony of Stripe-faced Dunnarts (Sminthopsis macroura?

    Directory of Open Access Journals (Sweden)

    Every Alison L

    2011-02-01

    Full Text Available Abstract Since the discovery that Helicobacter pylori causes a range of pathologies in the stomachs of infected humans, it has become apparent that Helicobacters are found in a diverse range of animal species where they are frequently associated with disease. In 2003 and 2004, there were two outbreaks of increased mortality associated with gastric bleeding and weight-loss in a captive colony of the Australian marsupial, the Stripe-faced Dunnart (Sminthopsis macroura. The presence of gastric pathology led to an investigation of potential Helicobacter pathogenesis in these animals. Histological examination revealed the presence of gastritis, and PCR analysis confirmed the presence of Helicobacter infection in the stomachs of these marsupials. Surprisingly, sequencing of 16S rRNA from these bacteria identified the species as H. pylori and PCR confirmed the strain to be positive for the important pathogenesis factor, cagA. We therefore describe, for the first time, an apparent reverse zoonotic infection of Stripe-faced Dunnarts with H. pylori. Already prone to pathological effects of stress (as experienced during breeding season, concomitant H. pylori infection appears to be a possible essential but not sufficient co-factor in prototypic gastric bleeding and weight loss in these marsupials. The Stripe-faced Dunnart could represent a new model for investigating Helicobacter-driven gastric pathology. Infections from their human handlers, specifically of H. pylori, may be a potential risk to captive colonies of marsupials.

  19. Cross-sectional anatomy, computed tomography and magnetic resonance imaging of the head of common dolphin (Delphinus delphis) and striped dolphin (Stenella coeruleoalba).

    Science.gov (United States)

    Alonso-Farré, J M; Gonzalo-Orden, M; Barreiro-Vázquez, J D; Barreiro-Lois, A; André, M; Morell, M; Llarena-Reino, M; Monreal-Pawlowsky, T; Degollada, E

    2015-02-01

    Computed tomography (CT) and low-field magnetic resonance imaging (MRI) were used to scan seven by-caught dolphin cadavers, belonging to two species: four common dolphins (Delphinus delphis) and three striped dolphins (Stenella coeruleoalba). CT and MRI were obtained with the animals in ventral recumbency. After the imaging procedures, six dolphins were frozen at -20°C and sliced in the same position they were examined. Not only CT and MRI scans, but also cross sections of the heads were obtained in three body planes: transverse (slices of 1 cm thickness) in three dolphins, sagittal (5 cm thickness) in two dolphins and dorsal (5 cm thickness) in two dolphins. Relevant anatomical structures were identified and labelled on each cross section, obtaining a comprehensive bi-dimensional topographical anatomy guide of the main features of the common and the striped dolphin head. Furthermore, the anatomical cross sections were compared with their corresponding CT and MRI images, allowing an imaging identification of most of the anatomical features. CT scans produced an excellent definition of the bony and air-filled structures, while MRI allowed us to successfully identify most of the soft tissue structures in the dolphin's head. This paper provides a detailed anatomical description of the head structures of common and striped dolphins and compares anatomical cross sections with CT and MRI scans, becoming a reference guide for the interpretation of imaging studies. © 2014 Blackwell Verlag GmbH.

  20. Nanoscale control of stripe-ordered magnetic domain walls by vertical spin transfer torque in La0.67Sr0.33MnO3 film

    Science.gov (United States)

    Wang, Jing; Wu, Shizhe; Ma, Ji; Xie, Lishan; Wang, Chuanshou; Malik, Iftikhar Ahmed; Zhang, Yuelin; Xia, Ke; Nan, Ce-Wen; Zhang, Jinxing

    2018-02-01

    Stripe-ordered domains with perpendicular magnetic anisotropy have been intensively investigated due to their potential applications in high-density magnetic data-storage devices. However, the conventional control methods (e.g., epitaxial strain, local heating, magnetic field, and magnetoelectric effect) of the stripe-ordered domain walls either cannot meet the demands for miniaturization and low power consumption of spintronic devices or require high strength of the electric field due to the small value of the magnetoelectric effect at room temperature. Here, a domain-wall resistive effect of 0.1% was clarified in La0.67Sr0.33MnO3 thin films between the configurations of current in the plane and perpendicular to the plane of walls. Furthermore, a reversible nanoscale control of the domain-wall re-orientation by vertical spin transfer torque across the probe/film interface was achieved, where a probe voltage of 0.1 V was applied on a manganite-based capacitor. We also demonstrated that the stripe-ordered magnetic domain-wall re-orientation strongly depends on the AC frequency of the scanning probe voltage which was applied on the capacitor.

  1. Diffusion-time-resolved ion-beam-induced charge collection from stripe-like test junctions induced by heavy-ion microbeams

    International Nuclear Information System (INIS)

    Guo, B.N.; El Bouanani, M.; Renfrow, S.N.; Nigam, M.; Walsh, D.S.; Doyle, B.L.; Duggan, J.L.; McDaniel, F.D.

    2001-01-01

    To design more radiation-tolerant integrated circuits (ICs), it is necessary to design and test accurate models of ionizing-radiation-induced charge collection dynamics. A new technique, diffusion-time-resolved ion-beam-induced charge collection (DTRIBICC), is used to measure the average arrival time of the diffused charge, which is related to the average time of the arrival carrier density at the junction. Specially designed stripe-like test junctions are studied using a 12 MeV carbon microbeam with a spot size of ∼1 μm. The relative arrival time of ion-generated charge and the collected charge are measured using a multiple parameter data acquisition system. A 2-D device simulation code, MEDICI, is used to calculate the charge collection dynamics on the stripe-like test junctions. The simulations compare well with experimental microbeam measurements. The results show the importance of the diffused charge collection by junctions, which is especially significant for single-event upsets (SEUs) and multiple-event upsets (MEUs) in electronic devices. The charge sharing results also indicate that stripe-like junctions may be used as position-sensitive detectors with a resolution of ∼0.1 μm

  2. Identification and Severity Determination of Wheat Stripe Rust and Wheat Leaf Rust Based on Hyperspectral Data Acquired Using a Black-Paper-Based Measuring Method.

    Science.gov (United States)

    Wang, Hui; Qin, Feng; Ruan, Liu; Wang, Rui; Liu, Qi; Ma, Zhanhong; Li, Xiaolong; Cheng, Pei; Wang, Haiguang

    2016-01-01

    It is important to implement detection and assessment of plant diseases based on remotely sensed data for disease monitoring and control. Hyperspectral data of healthy leaves, leaves in incubation period and leaves in diseased period of wheat stripe rust and wheat leaf rust were collected under in-field conditions using a black-paper-based measuring method developed in this study. After data preprocessing, the models to identify the diseases were built using distinguished partial least squares (DPLS) and support vector machine (SVM), and the disease severity inversion models of stripe rust and the disease severity inversion models of leaf rust were built using quantitative partial least squares (QPLS) and support vector regression (SVR). All the models were validated by using leave-one-out cross validation and external validation. The diseases could be discriminated using both distinguished partial least squares and support vector machine with the accuracies of more than 99%. For each wheat rust, disease severity levels were accurately retrieved using both the optimal QPLS models and the optimal SVR models with the coefficients of determination (R2) of more than 0.90 and the root mean square errors (RMSE) of less than 0.15. The results demonstrated that identification and severity evaluation of stripe rust and leaf rust at the leaf level could be implemented based on the hyperspectral data acquired using the developed method. A scientific basis was provided for implementing disease monitoring by using aerial and space remote sensing technologies.

  3. Identification and Severity Determination of Wheat Stripe Rust and Wheat Leaf Rust Based on Hyperspectral Data Acquired Using a Black-Paper-Based Measuring Method.

    Directory of Open Access Journals (Sweden)

    Hui Wang

    Full Text Available It is important to implement detection and assessment of plant diseases based on remotely sensed data for disease monitoring and control. Hyperspectral data of healthy leaves, leaves in incubation period and leaves in diseased period of wheat stripe rust and wheat leaf rust were collected under in-field conditions using a black-paper-based measuring method developed in this study. After data preprocessing, the models to identify the diseases were built using distinguished partial least squares (DPLS and support vector machine (SVM, and the disease severity inversion models of stripe rust and the disease severity inversion models of leaf rust were built using quantitative partial least squares (QPLS and support vector regression (SVR. All the models were validated by using leave-one-out cross validation and external validation. The diseases could be discriminated using both distinguished partial least squares and support vector machine with the accuracies of more than 99%. For each wheat rust, disease severity levels were accurately retrieved using both the optimal QPLS models and the optimal SVR models with the coefficients of determination (R2 of more than 0.90 and the root mean square errors (RMSE of less than 0.15. The results demonstrated that identification and severity evaluation of stripe rust and leaf rust at the leaf level could be implemented based on the hyperspectral data acquired using the developed method. A scientific basis was provided for implementing disease monitoring by using aerial and space remote sensing technologies.

  4. Mycobacterium pseudoshottsii sp. nov., a slowly growing chromogenic species isolated from Chesapeake Bay striped bass (Morone saxatilis)

    Science.gov (United States)

    Rhodes, M.W.; Kator, H.; McNabb, A.; Deshayes, C.; Reyrat, J.-M.; Brown-Elliott, B. A.; Wallace, R.; Trott, K.A.; Parker, J.M.; Lifland, B.; Osterhout, G.; Kaattari, I.; Reece, K.; Vogelbein, W.; Ottinger, C.A.

    2005-01-01

    A group of slowly growing photochromogenic mycobacteria was isolated from Chesapeake Bay striped bass (Morone saxatilis) during an epizootic of mycobacteriosis. Growth characteristics, acid-fastness and 16S rRNA gene sequencing results were consistent with those of the genus Mycobacterium. Biochemical reactions, growth characteristics and mycolic acid profiles (HPLC) resembled those of Mycobacterium shottsii, a non-pigmented mycobacterium also isolated during the same epizootic. Sequencing of the 16S rRNA genes, the gene encoding the exported repeated protein (erp) and the gene encoding the 65 kDa heat-shock protein (hsp65) and restriction enzyme analysis of the hsp65 gene demonstrated that this group of isolates is unique. Insertion sequences associated with Mycobacterium ulcerans, IS2404 and IS2606, were detected by PCR. These isolates could be differentiated from other slowly growing pigmented mycobacteria by their inability to grow at 37 ??C, production of niacin and urease, absence of nitrate reductase, negative Tween 80 hydrolysis and resistance to isoniazid (1 ??g ml-1), p-nitrobenzoic acid, thiacetazone and thiophene-2-carboxylic hydrazide. On the basis of this polyphasic study, it is proposed that these isolates represent a novel species, Mycobacterium pseudoshottsii sp. nov. The type strain, L15T, has been deposited in the American Type Culture Collection as ATCC BAA-883T and the National Collection of Type Cultures (UK) as NCTC 13318T. ?? 2005 IUMS.

  5. Actin Cytoskeleton and Golgi Involvement in Barley stripe mosaic virus Movement and Cell Wall Localization of Triple Gene Block Proteins

    Directory of Open Access Journals (Sweden)

    Hyoun-Sub Lim

    2013-03-01

    Full Text Available Barley stripe mosaic virus (BSMV induces massive actin filament thickening at the infection front of infected Nicotiana benthamiana leaves. To determine the mechanisms leading to actin remodeling, fluorescent protein fusions of the BSMV triple gene block (TGB proteins were coexpressed in cells with the actin marker DsRed: Talin. TGB ectopic expression experiments revealed that TGB3 is a major elicitor of filament thickening, that TGB2 resulted in formation of intermediate DsRed:Talin filaments, and that TGB1 alone had no obvious effects on actin filament structure. Latrunculin B (LatB treatments retarded BSMV cell-to-cell movement, disrupted actin filament organization, and dramatically decreased the proportion of paired TGB3 foci appearing at the cell wall (CW. BSMV infection of transgenic plants tagged with GFP-KDEL exhibited membrane proliferation and vesicle formation that were especially evident around the nucleus. Similar membrane proliferation occurred in plants expressing TGB2 and/or TGB3, and DsRed: Talin fluorescence in these plants colocalized with the ER vesicles. TGB3 also associated with the Golgi apparatus and overlapped with cortical vesicles appearing at the cell periphery. Brefeldin A treatments disrupted Golgi and also altered vesicles at the CW, but failed to interfere with TGB CW localization. Our results indicate that actin cytoskeleton interactions are important in BSMV cell-to-cell movement and for CW localization of TGB3.

  6. The validity and reliability of the navicular fat stripe as a screening test for detection of navicular fractures.

    Science.gov (United States)

    Kirk, M; Orlinsky, M; Goldberg, R; Brotman, P

    1990-12-01

    The purpose of this study was to determine if the navicular fat stripe (NFS) is a valid and reliable screening tool in assessing potential navicular fractures. Retrospective analysis. Minor trauma section of the Los Angeles County-University of Southern California Medical Center emergency department. Study population included patients seen for wrist injury between January 1987 and December 1988. The individuals who interpreted the radiographs included eight observers with varying degrees of radiographic experience. None The positive predictive value averaged 12% or 15% depending on how we counted a straight NFS, and the negative predictive value averaged 93% or 95%, again depending on how we counted a straight NFS. A straight NFS was ten times as likely to occur among normal wrists than among those with navicular fractures. Interobserver reliability was found to be high with a Hoyt reliability coefficient of .79. An abnormal NFS is a poor predictor of a navicular fracture while both a straight and a normal NFS are good predictors of no navicular fracture. A normal NFS may allow less stringent treatment by the emergency physician. Extremes of radiographic experience were found to have no significant effect on NFS interpretation.

  7. Simulated impacts of climate change on current farming locations of striped catfish (Pangasianodon hypophthalmus; Sauvage) in the Mekong Delta, Vietnam.

    Science.gov (United States)

    Nguyen, Anh L; Dang, Vinh H; Bosma, Roel H; Verreth, Johan A J; Leemans, Rik; De Silva, Sena S

    2014-12-01

    In Vietnam, culturing striped catfish makes an important contribution to the Mekong Delta's economy. Water level rise during rainy season and salt intrusion during dry season affect the water exchange and quality for this culture. Sea level rise as a consequence of climate change will worsen these influences. In this study, water level rise and salt water intrusion for three sea level rise (SLR) scenarios (i.e., +30, +50, and +75 cm) were simulated. The results showed that at SLR +50, the 3-m-flood level would spread downstream and threaten farms located in AnGiang, DongThap and CanTho provinces. Rising salinity levels for SLR +75 would reduce the window appropriate for the culture in SocTrang and BenTre provinces, and in TienGiang's coastal districts. Next to increasing dikes to reduce the impacts, the most tenable and least disruptive option to the farming community would be to shift to a salinity tolerant strain of catfish.

  8. Breeding biology of the Three-striped warbler in Venezuela: A contrast between tropical and temperate parulids

    Science.gov (United States)

    Cox, W.A.; Martin, T.E.

    2009-01-01

    We document reproductive life history traits of the Three-striped Warbler (Basileuterus tristriatus) from 146 nests in Venezuela and compare our results to data from the literature for other tropical and temperate parulid species. Mean (?? SE) clutch size was 1.96 ?? 0.03 eggs (n = 96) and fresh egg mass was 2.09 ?? 0.02 g. The incubation period was 15.8 ?? 0.2 days (n = 23) and the nestling period was 10.5 ?? 0.3 days (n = 12). Males did not incubate and rarely provided food for females during incubation. Females had 57 ?? 2% (n = 49) nest attentiveness (% of time on the nest incubating), which caused egg temperature to commonly become cold relative to development. Both adults fed nestlings and feeding rates increased with nestling age. The growth rate constant for nestlings based on mass was K 0.490, which is slower than for north temperate warblers. Predation was the primary source of nest failure and only 22% of nests were successful based on a Mayfield daily predation rate of 0.048 ?? 0.006. Our literature review indicates parulids differ strongly in life histories between temperate and tropical/subtropical sites with species in the tropics having, on average, smaller clutches, longer incubation periods, lower nest attentiveness, longer off-bouts, and longer nestling periods. ?? 2009 by the Wilson Ornithological Society.

  9. Highly-reliable operation of 638-nm broad stripe laser diode with high wall-plug efficiency for display applications

    Science.gov (United States)

    Yagi, Tetsuya; Shimada, Naoyuki; Nishida, Takehiro; Mitsuyama, Hiroshi; Miyashita, Motoharu

    2013-03-01

    Laser based displays, as pico to cinema laser projectors have gathered much attention because of wide gamut, low power consumption, and so on. Laser light sources for the displays are operated mainly in CW, and heat management is one of the big issues. Therefore, highly efficient operation is necessitated. Also the light sources for the displays are requested to be highly reliable. 638 nm broad stripe laser diode (LD) was newly developed for high efficiency and highly reliable operation. An AlGaInP/GaAs red LD suffers from low wall plug efficiency (WPE) due to electron overflow from an active layer to a p-cladding layer. Large optical confinement factor (Γ) design with AlInP cladding layers is adopted to improve the WPE. The design has a disadvantage for reliable operation because the large Γ causes high optical density and brings a catastrophic optical degradation (COD) at a front facet. To overcome the disadvantage, a window-mirror structure is also adopted in the LD. The LD shows WPE of 35% at 25°C, highest record in the world, and highly stable operation at 35°C, 550 mW up to 8,000 hours without any catastrophic optical degradation.

  10. People’s attitudes toward Striped Hyaena (Hyaena hyaena Linnaeus, 1758 (Mammalia: Carnivora: Hyaenidae conservation in lowland Nepal

    Directory of Open Access Journals (Sweden)

    Shivish Bhandari

    2016-08-01

    Full Text Available This study aimed to explore people’s attitudes toward Striped Hyaena conservation in lowland Nepal.  Structured questionnaire sheets were used to collect information on major threats, human casualties, and people’s perception towards Hyaenas and other carnivores.  People’s perceptions toward Hyaenas and conservation were overall positive.  During the study, 400 people were interviewed and questionnaire sheets were filled.  It was discovered that 63% had a positive attitude toward the Hyaenas.  On the other hand, 37% of the people had a negative attitude regarding the species’ conservation.  It was found that local people had understood various aspects of Hyaena ecology.  Sixty-five percent of the people responded that the Hyaena entered human populated areas due to an absence of food in the natural forests and habitat degradation.  A total of 19% of the respondents reported killing carnivores including the Hyaena due to human-carnivore conflicts.  

  11. High density culture of white bass X striped bass fingerlings in raceways using power plant heated effluent

    Energy Technology Data Exchange (ETDEWEB)

    Collins, C.M.; Burton, G.L.; Schweinforth, R.L.

    1983-06-01

    White bass (Morone chrysops) X striped bass (M. saxatilis) hybrids weighing 1691/lb were initially stocked in five 24 ft/sup 3/ floating screen cages for 20 days. Hybrids averaging one inch in total length and 361 fish/lb were released in four 614 ft/sup 3/ concrete raceways. Two stocking densities, 2.6 and 5.1 fish/ft/sup 3/, were evaluated in the 94-day study using a flow rate of 300 gpm/raceway. Water temperatures averaged 79/sup 0/F and water quality was adequate throughout the production period. Fish were hand fed to satiation daily. Columnaris and Aeromonas hydrophila caused the most serious disease problems. Gas supersaturation was suspect in high mortality levels during cage culture of hybrid bass fry. Cannibalism may have been responsible for unaccountable losses prior to raceway stocking and at harvest. The study yielded 5773 hybrids weighing 658 lb. The high density treatment showed greater weight gain, average weight, average length and percent survival as well as improved food conversion. Results suggest that higher stocking densities and periodic grading may increase production and suppress cannibalism. 10 references, 3 figures, 3 tables.

  12. The Sloan Digital Sky Survey COADD: 275 deg2 of deep Sloan Digital Sky Survey imaging on stripe 82

    International Nuclear Information System (INIS)

    Annis, James; Soares-Santos, Marcelle; Dodelson, Scott; Hao, Jiangang; Jester, Sebastian; Johnston, David E.; Kubo, Jeffrey M.; Lampeitl, Hubert; Lin, Huan; Miknaitis, Gajus; Yanny, Brian; Strauss, Michael A.; Gunn, James E.; Lupton, Robert H.; Becker, Andrew C.; Ivezić, Željko; Fan, Xiaohui; Jiang, Linhua; Seo, Hee-Jong; Simet, Melanie

    2014-01-01

    We present details of the construction and characterization of the coaddition of the Sloan Digital Sky Survey (SDSS) Stripe 82 ugriz imaging data. This survey consists of 275 deg 2 of repeated scanning by the SDSS camera over –50° ≤ α ≤ 60° and –1.°25 ≤ δ ≤ +1.°25 centered on the Celestial Equator. Each piece of sky has ∼20 runs contributing and thus reaches ∼2 mag fainter than the SDSS single pass data, i.e., to r ∼ 23.5 for galaxies. We discuss the image processing of the coaddition, the modeling of the point-spread function (PSF), the calibration, and the production of standard SDSS catalogs. The data have an r-band median seeing of 1.''1 and are calibrated to ≤1%. Star color-color, number counts, and PSF size versus modeled size plots show that the modeling of the PSF is good enough for precision five-band photometry. Structure in the PSF model versus magnitude plot indicates minor PSF modeling errors, leading to misclassification of stars as galaxies, as verified using VVDS spectroscopy. There are a variety of uses for this wide-angle deep imaging data, including galactic structure, photometric redshift computation, cluster finding and cross wavelength measurements, weak lensing cluster mass calibrations, and cosmic shear measurements.

  13. Food Availability Is the Main Driver of Seasonal Changes in Resting Metabolic Rate in African Striped Mice (Rhabdomys pumilio).

    Science.gov (United States)

    Rimbach, Rebecca; Jäger, Jörg; Pillay, Neville; Schradin, Carsten

    Resting metabolic rate (RMR) influences energy allocation to survival, growth, and reproduction, and significant seasonal changes in RMR have been reported. According to one hypothesis, seasonal changes in RMR are mainly attributable to seasonal changes in ambient temperature (T a ) and food availability. Studies on species from the temperate zone indicated that food availability is the main driver. However, whether this is generally true is unknown, because studies from the tropics and subtropics, where most species live, are rare. We studied the African striped mouse (Rhabdomys pumilio) inhabiting a seasonal environment with hot dry seasons with low food availability and cold moist seasons with high food availability. Using 603 RMR measurements of 277 individuals, we investigated the relative importance of food availability and T a on RMR during selected periods, in which one extrinsic factor varied while the other factor was relatively constant. At similar T a , residual RMR increased with increasing levels of food availability. In contrast, different T a did not influence residual RMR at similar levels of food availability. Thus, our study on a subtropical species gives support to the hypothesis, derived from temperate zone species, that food availability mainly drives seasonal changes in RMR.

  14. A high throughput barley stripe mosaic virus vector for virus induced gene silencing in monocots and dicots.

    Directory of Open Access Journals (Sweden)

    Cheng Yuan

    Full Text Available Barley stripe mosaic virus (BSMV is a single-stranded RNA virus with three genome components designated alpha, beta, and gamma. BSMV vectors have previously been shown to be efficient virus induced gene silencing (VIGS vehicles in barley and wheat and have provided important information about host genes functioning during pathogenesis as well as various aspects of genes functioning in development. To permit more effective use of BSMV VIGS for functional genomics experiments, we have developed an Agrobacterium delivery system for BSMV and have coupled this with a ligation independent cloning (LIC strategy to mediate efficient cloning of host genes. Infiltrated Nicotiana benthamiana leaves provided excellent sources of virus for secondary BSMV infections and VIGS in cereals. The Agro/LIC BSMV VIGS vectors were able to function in high efficiency down regulation of phytoene desaturase (PDS, magnesium chelatase subunit H (ChlH, and plastid transketolase (TK gene silencing in N. benthamiana and in the monocots, wheat, barley, and the model grass, Brachypodium distachyon. Suppression of an Arabidopsis orthologue cloned from wheat (TaPMR5 also interfered with wheat powdery mildew (Blumeria graminis f. sp. tritici infections in a manner similar to that of the A. thaliana PMR5 loss-of-function allele. These results imply that the PMR5 gene has maintained similar functions across monocot and dicot families. Our BSMV VIGS system provides substantial advantages in expense, cloning efficiency, ease of manipulation and ability to apply VIGS for high throughput genomics studies.

  15. Complete mitochondrial genome of Cuora trifasciata (Chinese three-striped box turtle), and a comparative analysis with other box turtles.

    Science.gov (United States)

    Li, Wei; Zhang, Xin-Cheng; Zhao, Jian; Shi, Yan; Zhu, Xin-Ping

    2015-01-25

    Cuora trifasciata has become one of the most critically endangered species in the world. The complete mitochondrial genome of C. trifasciata (Chinese three-striped box turtle) was determined in this study. Its mitochondrial genome is a 16,575-bp-long circular molecule that consists of 37 genes that are typically found in other vertebrates. And the basic characteristics of the C. trifasciata mitochondrial genome were also determined. Moreover, a comparison of C. trifasciata with Cuora cyclornata, Cuora pani and Cuora aurocapitata indicated that the four mitogenomics differed in length, codons, overlaps, 13 protein-coding genes (PCGs), ND3, rRNA genes, control region, and other aspects. Phylogenetic analysis with Bayesian inference and maximum likelihood based on 12 protein-coding genes of the genus Cuora indicated the phylogenetic position of C. trifasciata within Cuora. The phylogenetic analysis also showed that C. trifasciata from Vietnam and China formed separate monophyletic clades with different Cuora species. The results of nucleotide base compositions, protein-coding genes and phylogenetic analysis showed that C. trifasciata from these two countries may represent different Cuora species. Copyright © 2014 Elsevier B.V. All rights reserved.

  16. Extraordinary Adaptive Plasticity of Colorado Potato Beetle: “Ten-Striped Spearman” in the Era of Biotechnological Warfare

    Directory of Open Access Journals (Sweden)

    Aleksandar Cingel

    2016-09-01

    Full Text Available Expanding from remote areas of Mexico to a worldwide scale, the ten-striped insect, the Colorado potato beetle (CPB, Leptinotarsa decemlineata Say, has risen from being an innocuous beetle to a prominent global pest. A diverse life cycle, phenotypic plasticity, adaptation to adverse conditions, and capability to detoxify or tolerate toxins make this insect appear to be virtually “indestructible”. With increasing advances in molecular biology, tools of biotechnological warfare were deployed to combat CPB. In the last three decades, genetically modified potato has created a new challenge for the beetle. After reviewing hundreds of scientific papers dealing with CPB control, it became clear that even biotechnological means of control, if used alone, would not defeat the Colorado potato beetle. This control measure once again appears to be provoking the potato beetle to exhibit its remarkable adaptability. Nonetheless, the potential for adaptation to these techniques has increased our knowledge of this pest and thus opened possibilities for devising more sustainable CPB management programs.

  17. Intracellular localization of rice stripe virus RNA-dependent RNA polymerase and its interaction with nucleocapsid protein.

    Science.gov (United States)

    Zhao, Shuling; Hao, Jiahui; Xue, Yanan; Liang, Changyong

    2015-12-01

    The RNA-dependent RNA polymerase (RdRp) of rice stripe virus (RSV) is critical for both the transcription and replication of the viral genome. Despite its importance, little is known about how it functions in cells. In the present study, RSV RdRp was split into three pieces, since expression of the full protein could not be achieved. Then, the intracellular localization of these three RdRp fragments and their interactions with nucleocapsid protein (NP) were investigated, which is another viral protein required for viral RNA synthesis. The data showed that all three RdRp fragments displayed punctuate staining patterns in the cytoplasm, and the C-terminal fragment co-localized with NP in the perinuclear region. Both bimolecular fluorescence complementation and co-immunoprecipitation experiments demonstrated that of the three RdRp fragments, only the C-terminal fragment could interact with NP. Further analysis using a series of truncated NPs identified the N-terminal 50-amino-acid region within NP as the determinant for its interaction with the C-terminus of RdRp.

  18. Deep learning approach for classifying, detecting and predicting photometric redshifts of quasars in the Sloan Digital Sky Survey stripe 82

    Science.gov (United States)

    Pasquet-Itam, J.; Pasquet, J.

    2018-04-01

    We have applied a convolutional neural network (CNN) to classify and detect quasars in the Sloan Digital Sky Survey Stripe 82 and also to predict the photometric redshifts of quasars. The network takes the variability of objects into account by converting light curves into images. The width of the images, noted w, corresponds to the five magnitudes ugriz and the height of the images, noted h, represents the date of the observation. The CNN provides good results since its precision is 0.988 for a recall of 0.90, compared to a precision of 0.985 for the same recall with a random forest classifier. Moreover 175 new quasar candidates are found with the CNN considering a fixed recall of 0.97. The combination of probabilities given by the CNN and the random forest makes good performance even better with a precision of 0.99 for a recall of 0.90. For the redshift predictions, the CNN presents excellent results which are higher than those obtained with a feature extraction step and different classifiers (a K-nearest-neighbors, a support vector machine, a random forest and a Gaussian process classifier). Indeed, the accuracy of the CNN within |Δz| http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/611/A97

  19. Pteridine, not carotenoid, pigments underlie the female-specific orange ornament of striped plateau lizards (Sceloporus virgatus).

    Science.gov (United States)

    Weiss, S L; Foerster, K; Hudon, J

    2012-02-01

    Indicator models of sexual selection suggest that signal honesty is maintained via costs of ornament expression. Carotenoid-based visual signals are a well-studied example, as carotenoids may be environmentally limited and impact signaler health. However, not all bright yellow, orange and red ornaments found in vertebrates are carotenoid-based; pteridine pigments may also produce these colors. We examine the contribution of carotenoid and pteridine pigments to the orange reproductive color of female striped plateau lizards (Sceloporus virgatus). This color ornament reliably indicates female mate quality, yet costs maintaining signal honesty are currently unknown. Dietary carotenoid manipulations did not affect orange color, and orange skin differed from surrounding white skin in drosopterin, not carotenoid, content. Further, orange color positively correlated with drosopterin, not carotenoid, concentration. Drosopterin-based female ornaments avoid the direct trade-offs of using carotenoids for ornament production vs egg production, thus may relax counter-selection against color ornament exaggeration in females. Direct experimentation is needed to determine the actual costs of pteridine-based ornaments. Like carotenoids, pteridines influence important biological processes, including immune and antioxidant function; predation and social costs may also be relevant. Copyright © 2011 Elsevier Inc. All rights reserved.

  20. Skin lipids of the striped plateau lizard (Sceloporus virgatus) correlate with female receptivity and reproductive quality alongside visual ornaments.

    Science.gov (United States)

    Goldberg, Jay K; Wallace, Alisa K; Weiss, Stacey L

    2017-09-14

    Sex pheromones can perform a variety of functions ranging from revealing the location of suitable mates to being honest signals of mate quality, and they are used in the mate selection process by many species of reptile. In this study, we determined whether the skin lipids of female striped plateau lizards (Sceloporus virgatus) can predict the reproductive quality of females, thereby having the potential to serve as pheromones. Using gas chromatography/mass spectrometry, we identified 17 compounds present in skin lipids of female lizards. Using principal component analysis to compare the skin lipid profile of receptive and non-receptive females, we determined that an uncharacterized compound may allow for chemical identification of receptive mates. We also compared extracted principal components to measures of female fitness and reproductive qualities and found that the level of two 18 carbon fatty acids present in a female's skin lipids may indicate her clutch size. Finally, we compared the information content of the skin lipids to that of female-specific color ornaments to assess whether chemical and visual cues transmit different information or not. We found that the chroma of a female's orange throat patch is also related to her clutch size, suggesting that chemical signals may reinforce the information communicated by visual ornamentation in this species which would support the "backup signals" hypothesis for multiple signals.