WorldWideScience

Sample records for stream bacteria part

  1. Transformation of nitrogen and distribution of nitrogen-related bacteria in a polluted urban stream.

    Science.gov (United States)

    Jiao, Y; Jin, W B; Zhao, Q L; Zhang, G D; Yan, Y; Wan, J

    2009-01-01

    Most researchers focused on either nitrogen species or microbial community for polluted urban stream while ignoring the interaction between them and its effect on nitrogen transformation, which restricted the rational selection of an effective and feasible remediation technology. Taking Buji stream in Shenzhen (China) as target stream, the distribution of nitrogen-related bacteria was investigated by most probable number (MPN) besides analysis of nitrogen species etc. The nitrogen-related bacteria in sediment were 10(2) times richer than those in water. Owing to their faster growth, the MPN of ammonifying bacteria and denitrifying bacteria were 10(5) and 10(2) times higher than those of nitrifying bacteria, respectively. The ammonifying bacteria numbers were significantly related to BOD5 in water, while nitrifying bacteria in sediment correlated well with nitrate in water. Thus, nitrification occurred mainly in sediment surface and was limited by low proportion of nitrifying bacteria. The denitrifying bacteria in sediment had good relationship with BOD5 and nitrite and nitrate in water. Low DO and rich organic compounds were beneficial to denitrification but unfavourable to nitrification. Denitrification was restricted by low nitrite and nitrate concentration. These results could be served as a reference for implementing the remediation scheme of nitrogen polluted urban stream.

  2. Uncertanity Analysis in Parameter Estimation of Coupled Bacteria-Sediment Fate and Transport in Streams

    Science.gov (United States)

    Massoudieh, A.; Le, T.; Pachepsky, Y. A.

    2014-12-01

    E. coli is widely used as an fecal indicator bacteria in streams. It has been shown that the interaction between sediments and the bacteria is an important factor in determining its fate and transport in water bodies. In this presentation parameter estimation and uncertainty analysis of a mechanistic model of bacteria-sediment interaction respectively using a hybrid genetic algorithm and Makov-Chain Monte Carlo (MCMC) approach will be presented. The physically-based model considers the advective-dispersive transport of sediments as well as both free-floating and sediment-associated bacteria in the water column and also the fate and transport of bacteria in the bed sediments in a small stream. The bed sediments are treated as a distributed system which allows modeling the evolution of the vertical distribution of bacteria as a result of sedimentation and resuspension, diffusion and bioturbation in the sediments. One-dimensional St. Venant's equation is used to model flow in the stream. The model is applied to sediment and E. coli concentration data collected during a high flow event in a small stream historically receiving agricultural runoff. Measured total suspended sediments and total E. coli concentrations in the water column at three sections of the stream are used for the parameter estimation. The data on the initial distribution of E. coli in the sediments was available and was used as the initial conditions. The MCMC method is used to estimate the joint probability distribution of model parameters including sediment deposition and erosion rates, critical shear stress for deposition and erosion, attachment and detachment rate constants of E. coli to/from sediments and also the effective diffusion coefficients of E. coli in the bed sediments. The uncertainties associated with the estimated parameters are quantified via the MCMC approach and the correlation between the posterior distribution of parameters have been used to assess the model adequacy and

  3. Patterns and sources of fecal coliform bacteria in three streams in Virginia, 1999-2000

    Science.gov (United States)

    Hyer, Kenneth; Moyer, Douglas

    2003-01-01

    Surface-water impairment by fecal coliform bacteria is a water-quality issue of national scope and importance. In Virginia, more than 175 stream segments are on the Commonwealth's 1998 303(d) list of impaired waters because of elevated concentrations of fecal coliform bacteria. These fecal coliform-impaired stream segments require the development of total maximum daily load (TMDL) and associated implementation plans, but accurate information on the sources contributing these bacteria usually is lacking. The development of defendable fecal coliform TMDLs and management plans can benefit from reliable information on the bacteria sources that are responsible for the impairment. Bacterial source tracking (BST) recently has emerged as a powerful tool for identifying the sources of fecal coliform bacteria that impair surface waters. In a demonstration of BST technology, three watersheds on Virginia's 1998 303(d) list with diverse land-use practices (and potentially diverse bacteria sources) were studied. Accotink Creek is dominated by urban land uses, Christians Creek by agricultural land uses, and Blacks Run is affected by both urban and agricultural land uses. During the 20-month field study (March 1999?October 2000), water samples were collected from each stream during a range of flow conditions and seasons. For each sample, specific conductance, dissolved oxygen concentration, pH, turbidity, flow, and water temperature were measured. Fecal coliform concentrations of each water sample were determined using the membrane filtration technique. Next, Escherichia coli (E. coli) were isolated from the fecal coliform bacteria and their sources were identified using ribotyping (a method of 'genetic fingerprinting'). Study results provide enhanced understanding of the concentrations and sources of fecal coliform bacteria in these three watersheds. Continuum sampling (sampling along the length of the streams) indicated that elevated concentrations of fecal coliform bacteria

  4. Microfluidic-Based Bacteria Isolation from Whole Blood for Diagnostics of Blood Stream Infection.

    Science.gov (United States)

    Zelenin, Sergey; Ramachandraiah, Harisha; Faridi, Asim; Russom, Aman

    2017-01-01

    Bacterial blood stream infection (BSI) potentially leads to life-threatening clinical conditions and medical emergencies such as severe sepsis, septic shock, and multi organ failure syndrome. Blood culturing is currently the gold standard for the identification of microorganisms and, although it has been automated over the decade, the process still requires 24-72 h to complete. This long turnaround time, especially for the identification of antimicrobial resistance, is driving the development of rapid molecular diagnostic methods. Rapid detection of microbial pathogens in blood related to bloodstream infections will allow the clinician to decide on or adjust the antimicrobial therapy potentially reducing the morbidity, mortality, and economic burden associated with BSI. For molecular-based methods, there is a lot to gain from an improved and straightforward method for isolation of bacteria from whole blood for downstream processing.We describe a microfluidic-based sample-preparation approach that rapidly and selectively lyses all blood cells while it extracts intact bacteria for downstream analysis. Whole blood is exposed to a mild detergent, which lyses most blood cells, and then to osmotic shock using deionized water, which eliminates the remaining white blood cells. The recovered bacteria are 100 % viable, which opens up possibilities for performing drug susceptibility tests and for nucleic-acid-based molecular identification.

  5. MODELING OF CONVECTIVE STREAMS IN PNEUMOBASIC OBJECTS (Part 2

    Directory of Open Access Journals (Sweden)

    B. M. Khroustalev

    2015-01-01

    Full Text Available The article presents modeling for investigation of aerodynamic processes on area sections (including a group of complex constructional works for different regimes of drop and wind streams  and  temperature  conditions  and  in  complex  constructional  works  (for  different regimes of heating and ventilation. There were developed different programs for innovation problems solution in the field of heat and mass exchange in three-dimensional space of pres- sures-speeds-temperatures of оbjects.The field of uses of pneumobasic objects: construction and roof of tennis courts, hockey pitches, swimming pools , and also exhibitions’ buildings, circus buildings, cafes, aqua parks, studios, mobile objects of medical purposes, hangars, garages, construction sites, service sta- tions and etc. Advantages of such objects are the possibility and simplicity of multiple instal- lation and demolition works. Their large-scale implementation is determined by temperature- moisture conditions under the shells.Analytical and calculating researches, real researches of thermodynamic parameters of heat and mass exchange, multifactorial processes of air in pneumobasic objects, their shells in a wide range of climatic parameters of air (January – December in the Republic of Belarus, in many geographical latitudes of many countries have shown that the limit of the possibility of optimizing wind loads, heat flow, acoustic effects is infinite (sports, residential, industrial, warehouse, the military-technical units (tanks, airplanes, etc.. In modeling of convective flows in pneumobasic objects (part 1 there are processes with higher dynamic parameters of the air flow for the characteristic pneumobasic object, carried out the calculation of the velocity field, temperature, pressure at the speed of access of air through the inflow holes up to 5 m/sec at the moments of times (20, 100, 200, 400 sec. The calculation was performed using the developed mathematical

  6. Estimated fecal coliform bacteria concentrations using near real-time continuous water-quality and streamflow data from five stream sites in Chester County, Pennsylvania, 2007–16

    Science.gov (United States)

    Senior, Lisa A.

    2017-09-15

    White Clay Creek near Strickersville. Fecal coliform bacteria data collected by USGS in 2016 (about nine samples per site) were used to validate the equations. The best-fit regression equations included log turbidity and seasonality factors computed using Julian Day as explanatory variables to estimate log FC concentrations at all five stream sites. The adjusted coefficient of determination for the equations ranged from 0.61 to 0.76, with the strength of the regression equations likely affected in part by the limited amount and variability of FC bacteria data. During summer months, the estimated and measured FC concentrations commonly were greater than the Pennsylvania Department of Environmental Protection established standards of 200 and 400 colonies per 100 milliliters for water contact from May through September at the 5 stream sites, with concentrations typically higher at 2 sites (White Clay Creek and West Branch Brandywine Creek at Modena) than at the other 3 sites. The estimated concentrations of FC bacteria during the summer months commonly were higher than measured concentrations and therefore could be considered cautious estimates of potential human-health risk. Additional water-quality data are needed to maintain and (or) improve the ability of regression equations to estimate FC concentrations by use of surrogate data.

  7. Interactions between stream fungi and bacteria associated with decomposing leaf litter at different levels of nutrient availability

    Science.gov (United States)

    Vladislav Gulis; Keller Suberkropp

    2003-01-01

    We examined the potential for interactions between aquatic hyphomycetes and bacteria isolated from leaves decaying in a headwater stream. In agar plate assays, culture filtrates of each of 28 aquatic hyphomycete isolates tested (5 species) inhibited bacterial growth (16 Gram-negative bacterial isolates belonging to 6 colony morphotypes were tested). Inhibition of...

  8. Disinfectant properties of acid mine drainage: its effects on enteric bacteria in a sewage-contaminated stream

    Energy Technology Data Exchange (ETDEWEB)

    Keating, S.T.; Celements, C.M.; Ostrowski, D.; Hanlon, T. [St. Francis College, Loretto, PA (United States). Dept. of Biology

    1996-09-01

    Studies conducted in a Cambria County, Pennsylvania, acid mine drainage stream suggest that mine drainage rapidly reduces in situ populations of fecal bacteria associated with inputs of untreated sewage. The density of lactose-fermenting bacteria, mostly coliform species from sewage, declined 1000-fold over a distance of less than 100 m following the input of high acid (pH 3.5 to 4.0), high ferrous iron (45 mg/l) acid mine drainage. Enterobacteriaceae were isolated from the stream, identified, and tested for tolerance to acid mine drainage by exposing cells to drainage for 10 minutes at 0 or 37{degree}C. Populations of all tested isolates were reduced by this treatment, but some isolates were significantly less affected than others. Thus, while mine drainage may act as a disinfectant, it may not reduce all populations of disease-causing intestinal bacteria at an equal, rapid rate.

  9. Innovation in radioactive wastewater-stream management: Part one

    International Nuclear Information System (INIS)

    Karameldin, A.

    2005-01-01

    Treatment of radioactive wastewater streams is receiving considerable attention in most countries that have nuclear reactors. The first Egyptian research reactor ETRR-1 has been operating for 40 years, resulting in accumulation of large quantities of wastewater collected in special drainage tanks called SDTs. Previous attempts were aimed at the volumetric reduction of streams present in SDTs, by reverse osmosis systems, which previously succeeded in reducing the water volume present in SDTs from 450 m 3 to 50 m 3 (during the period 1998-2000). The main drawbacks of the RO system are the additional amount of secondary wastes (turbidity and emulsion filters media replacement, and the excessive amounts of chemicals for the membrane cleaning, flushing and storing), and a limited contaminant release in the SDTs area, resulting in the decommissioning of the RO system. Meanwhile, the SDTs waste contents recently reached 500 m 3 . Recently, the invention of a system for volume reduction of the wastewater streams present in SDTs has been achieved. This system substantially utilises the air conditioning and ventilation techniques in water transfer from the wastewater to air. This process is promoted by a mutual heating and humidification of a compressed dry air introduced through SDTs. From the probable release of radioactive nuclides point of view, the analysis of the evaporation of waste streams present in SDTs has indicated that the proposed optimal evaporating temperature is around 75 deg. C. The design curve of the daily volumetric reduction of the wastewater streams vs. the necessary volumetric airflow rates at different operating temperatures has been achieved. Recently, an experimental facility is being constructed to obtain the optimal operating parameters of the system, regarding the probable emissions of the radioactive nuclides within the permissible release limits. (author)

  10. Concerning the role of cell lysis-cryptic growth in anaerobic side-stream reactors: the single-cell analysis of viable, dead and lysed bacteria.

    Science.gov (United States)

    Foladori, P; Velho, V F; Costa, R H R; Bruni, L; Quaranta, A; Andreottola, G

    2015-05-01

    In the Anaerobic Side-Stream Reactor (ASSR), part of the return sludge undergoes alternating aerobic and anaerobic conditions with the aim of reducing sludge production. In this paper, viability, enzymatic activity, death and lysis of bacterial cells exposed to aerobic and anaerobic conditions for 16 d were investigated at single-cell level by flow cytometry, with the objective of contributing to the understanding of the mechanisms of sludge reduction in the ASSR systems. Results indicated that total and viable bacteria did not decrease during the anaerobic phase, indicating that anaerobiosis at ambient temperature does not produce a significant cell lysis. Bacteria decay and lysis occurred principally under aerobic conditions. The aerobic decay rate of total bacteria (bTB) was considered as the rate of generation of lysed bacteria. Values of bTB of 0.07-0.11 d(-1) were measured in anaerobic + aerobic sequence. The enzymatic activity was not particularly affected by the transition from anaerobiosis to aerobiosis. Large solubilisation of COD and NH4(+) was observed only under anaerobic conditions, as a consequence of hydrolysis of organic matter, but not due to cell lysis. The observations supported the proposal of two independent mechanisms contributing equally to sludge reduction: (1) under anaerobic conditions: sludge hydrolysis of non-bacterial material, (2) under aerobic conditions: bacterial cell lysis and oxidation of released biodegradable compounds. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. Nutrient Loading Impacts on Culturable E. coli and other Heterotrophic Bacteria Fate in Simulated Stream Mesocosms

    Science.gov (United States)

    Understanding fecal indicator bacteria persistence in aquatic environments is important when making management decisions to improve instream water quality. Routinely, bacteria fate and transport models that rely on published kinetic decay constants are used to inform such decision making. The object...

  12. Segregation and integration of auditory streams when listening to multi-part music.

    Science.gov (United States)

    Ragert, Marie; Fairhurst, Merle T; Keller, Peter E

    2014-01-01

    In our daily lives, auditory stream segregation allows us to differentiate concurrent sound sources and to make sense of the scene we are experiencing. However, a combination of segregation and the concurrent integration of auditory streams is necessary in order to analyze the relationship between streams and thus perceive a coherent auditory scene. The present functional magnetic resonance imaging study investigates the relative role and neural underpinnings of these listening strategies in multi-part musical stimuli. We compare a real human performance of a piano duet and a synthetic stimulus of the same duet in a prioritized integrative attention paradigm that required the simultaneous segregation and integration of auditory streams. In so doing, we manipulate the degree to which the attended part of the duet led either structurally (attend melody vs. attend accompaniment) or temporally (asynchronies vs. no asynchronies between parts), and thus the relative contributions of integration and segregation used to make an assessment of the leader-follower relationship. We show that perceptually the relationship between parts is biased towards the conventional structural hierarchy in western music in which the melody generally dominates (leads) the accompaniment. Moreover, the assessment varies as a function of both cognitive load, as shown through difficulty ratings and the interaction of the temporal and the structural relationship factors. Neurally, we see that the temporal relationship between parts, as one important cue for stream segregation, revealed distinct neural activity in the planum temporale. By contrast, integration used when listening to both the temporally separated performance stimulus and the temporally fused synthetic stimulus resulted in activation of the intraparietal sulcus. These results support the hypothesis that the planum temporale and IPS are key structures underlying the mechanisms of segregation and integration of auditory streams

  13. Segregation and integration of auditory streams when listening to multi-part music.

    Directory of Open Access Journals (Sweden)

    Marie Ragert

    Full Text Available In our daily lives, auditory stream segregation allows us to differentiate concurrent sound sources and to make sense of the scene we are experiencing. However, a combination of segregation and the concurrent integration of auditory streams is necessary in order to analyze the relationship between streams and thus perceive a coherent auditory scene. The present functional magnetic resonance imaging study investigates the relative role and neural underpinnings of these listening strategies in multi-part musical stimuli. We compare a real human performance of a piano duet and a synthetic stimulus of the same duet in a prioritized integrative attention paradigm that required the simultaneous segregation and integration of auditory streams. In so doing, we manipulate the degree to which the attended part of the duet led either structurally (attend melody vs. attend accompaniment or temporally (asynchronies vs. no asynchronies between parts, and thus the relative contributions of integration and segregation used to make an assessment of the leader-follower relationship. We show that perceptually the relationship between parts is biased towards the conventional structural hierarchy in western music in which the melody generally dominates (leads the accompaniment. Moreover, the assessment varies as a function of both cognitive load, as shown through difficulty ratings and the interaction of the temporal and the structural relationship factors. Neurally, we see that the temporal relationship between parts, as one important cue for stream segregation, revealed distinct neural activity in the planum temporale. By contrast, integration used when listening to both the temporally separated performance stimulus and the temporally fused synthetic stimulus resulted in activation of the intraparietal sulcus. These results support the hypothesis that the planum temporale and IPS are key structures underlying the mechanisms of segregation and integration of

  14. STREAM

    DEFF Research Database (Denmark)

    Godsk, Mikkel

    This paper presents a flexible model, ‘STREAM’, for transforming higher science education into blended and online learning. The model is inspired by ideas of active and collaborative learning and builds on feedback strategies well-known from Just-in-Time Teaching, Flipped Classroom, and Peer...... Instruction. The aim of the model is to provide both a concrete and comprehensible design toolkit for adopting and implementing educational technologies in higher science teaching practice and at the same time comply with diverse ambitions. As opposed to the above-mentioned feedback strategies, the STREAM...... model supports a relatively diverse use of educational technologies and may also be used to transform teaching into completely online learning. So far both teachers and educational developers have positively received the model and the initial design experiences show promise....

  15. The effect of in-stream activities on the Njoro River, Kenya. Part I: Stream flow and chemical water quality

    Science.gov (United States)

    Yillia, Paul T.; Kreuzinger, Norbert; Mathooko, Jude M.

    For shallow streams in sub-Saharan Africa, in-stream activities could be described as the actions by people and livestock, which take place within or besides stream channels. This study examined the nature of in-stream activities along a rural stream in Kenya and established the inequality in water allocation for various livelihood needs, as well as the negative impact they have on dry weather stream flow and chemical water quality. Seven locations along the stream were studied in wet and dry weather of 2006. Enumeration consisted of making head counts of people and livestock and tallying visitors at hourly intervals from 6 a.m. to 7 p.m. To estimate water abstraction, filled containers of known volume were counted and the stream was sampled to examine the impact on water quality. Water samples were obtained upstream and downstream of in-stream activities before (6 a.m.) and during (11 a.m., 6 p.m.) activities. Samples were analyzed for suspended solids, turbidity, BOD 5, total nitrogen and total phosphorus. The daily total abstraction at the middle reaches during dry weather was 120-150 m 3 day -1. More than 60% of abstraction was done by water vendors. Vended water from the stream was sold at US 3.5-7.5 per m 3 and vendors earned between US 3-6 a day. Abstracted water contributed approximately 40-60% of the total daily consumptive water use in the riparian area during dry weather but >30% of the morning stream flow was abstracted thereby upsetting stream flow in the lower reaches. The daily total water abstraction correlated positively ( R2, 0.98) and significantly ( p < 0.05) with the daily total human visit, which was diurnally periodic with two peaks, occurring between 9 a.m. and 10 a.m. and from 4 p.m. to 5 p.m. This diurnal pattern of visits and the corresponding in-stream activities affected water quality. In particular, suspended solids, turbidity and BOD 5 levels increased significantly ( p < 0.05) downstream during in-stream activities. It was concluded

  16. Survival, transport, and sources of fecal bacteria in streams and survival in land-applied poultry litter in the upper Shoal Creek basin, southwestern Missouri, 2001-2002

    Science.gov (United States)

    Schumacher, John G.

    2003-01-01

    Densities of fecal coliform bacteria along a 5.7-mi (mile) reach of Shoal Creek extending upstream from State Highway 97 (site 3) to State Highway W (site 2) and in two tributaries along this reach exceeded the Missouri Department of Natural Resources (MDNR) standard of 200 col/100 mL (colonies per 100 milliliters) for whole-body contact recreation. A combination of techniques was used in this report to provide information on the source, transport, and survival of fecal bacteria along this reach of Shoal Creek. Results of water-quality samples collected during dye-trace and seepage studies indicated that at summer low base-flow conditions, pastured cattle likely were a substantial source of fecal bacteria in Shoal Creek at the MDNR monitoring site (site 3) at State Highway 97. Using repeat element Polymerase Chain Reaction (rep-PCR), cattle were the presumptive source of about 50 percent of the Escherichia coli (E. coli) isolates in water samples from site 3. Cattle, horses, and humans were the most common presumptive source of E. coli isolates at sites further upstream. Poultry was identified by rep-PCR as a major source of E. coli in Pogue Creek, a tributary in the upper part of the study area. Results of the rep-PCR were in general agreement with the detection and distribution of trace concentrations of organic compounds commonly associated with human wastewater, such as caffeine, the antimicrobial agent triclosan, and the pharmaceutical compounds acetaminophen and thiabendazole (a common cattle anthelmintic). Significant inputs of fecal bacteria to Shoal Creek occurred along a 1.6-mi reach of Shoal Creek immediately upstream from site 3. During a 36-hour period in July 2001, average densities of fecal coliform and E. coli bacteria increased from less than or equal to 500 col/100 mL upstream from this stream reach (sample site 2c) to 2,100 and 1,400 col/100 mL, respectively, at the MDNR sampling site. Fecal bacteria densities exhibited diurnal variability at all

  17. Characterizing relationships among fecal indicator bacteria, microbial source tracking markers, and associated waterborne pathogen occurrence in stream water and sediments in a mixed land use watershed

    Science.gov (United States)

    Bed sediments of streams and rivers may store high concentrations of fecal indicator bacteria (FIB) and pathogens. Due to resuspension events, these contaminants can be mobilized into the water column and affect overall water quality. Other bacterial indicators such as microbial ...

  18. Iron encrustations on filamentous algae colonized by Gallionella-related bacteria in a metal-polluted freshwater stream

    Science.gov (United States)

    Mori, J. F.; Neu, T. R.; Lu, S.; Händel, M.; Totsche, K. U.; Küsel, K.

    2015-09-01

    Filamentous macroscopic algae were observed in slightly acidic to circumneutral (pH 5.9-6.5), metal-rich stream water that leaked out from a former uranium mining district (Ronneburg, Germany). These algae differed in color and morphology and were encrusted with Fe-deposits. To elucidate their potential interaction with Fe(II)-oxidizing bacteria (FeOB), we collected algal samples at three time points during summer 2013 and studied the algae-bacteria-mineral compositions via confocal laser scanning microscopy (CLSM), scanning electron microscopy (SEM), Fourier transform infrared (FTIR) spectra, and a 16S and 18S rRNA gene-based bacterial and algae community analysis. Surprisingly, sequencing analysis of 18S rRNA gene regions of green and brown algae revealed high homologies with the freshwater algae Tribonema (99.9-100 %). CLSM imaging indicated a loss of active chloroplasts in the algae cells, which may be responsible for the change in color in oxidation under the putative oxygen-saturated conditions that occur in association with photosynthetic algae. Quantitative PCR (polymerase chain reaction) revealed even higher Gallionella-related 16S rRNA gene copy numbers on the surface of green algae compared to the brown algae. The latter harbored a higher microbial diversity, including some putative predators of algae. A loss of chloroplasts in the brown algae could have led to lower photosynthetic activities and reduced EPS production, which is known to affect predator colonization. Collectively, our results suggest the coexistence of oxygen-generating algae Tribonema sp. and strictly microaerophilic neutrophilic FeOB in a heavy metal-rich environment.

  19. Trail Creek I: Assessing the Water Quality of Streams using Fecal Indicator Bacteria and Microbial Source Tracking

    Science.gov (United States)

    Saintil, T.; Radcliffe, D. E.; Rasmussen, T. C.; Kannan, A.

    2017-12-01

    Fecal coliforms are indicators for disease-causing pathogens. The United States Environmental Protection Agency (US. EPA) recommends the use of E. coli and Enterococci because they are highly correlated with pathogenic organisms in recreational waters. This standard method helps to determine the overall water quality and the potential health risks. Studies have shown that it is difficult to estimate the exact sources of fecal contamination because both human and certain animal species contain E. coli and Enterococci in their waste. Certain strains of E. coli and Enterococci are also able to survive outside of their hosts, which should not be the case for an appropriate fecal indicator. As a result, microbial source tracking (MST) studies use gene specific markers to identify the possible contributors to water pollution whether human or animal. Trail Creek is a second-order stream located in Athens-Clarke County, GA. The 33-km2 watershed is approximately 64% forests, 18% pastures and 16% residential communities. Trail Creek is on the TMDL list and an extended study on the relationships between the different factors causing elevated fecal bacteria is needed. Synoptic sampling events were conducted during baseflow conditions at six locations. Storm sampling events (> 8 mm) were captured using automated samplers at two locations. These samplers were equipped with pressure transducers which record stage at 30-minute intervals. The samples were analyzed for fecal coliform, E. Coli and Enterococci. Water quality parameters including temperature, specific conductance, dissolved oxygen, pH, and turbidity were also recorded. Relationships between the parameters and fecal indicator bacteria show inconsistent patterns and high variability. Using quantitative PCR and MST techniques, the human specific marker (HF183) and ruminant marker (Rum2Bac) were used to identify the fecal sources in both baseflow and storm samples. The presence and abundance of the different markers at

  20. Distribution of the bacteria Listeria monocytogenes in the western part of the Sea of Okhotsk

    Science.gov (United States)

    Terekhova, V. E.; Sosnin, V. A.; Buzoleva, L. S.; Shakirov, R. B.

    2010-04-01

    The Amur River’s influence on the distribution of the opportunistic bacteria Listeria monocytogenes in the western part of the Sea of Okhotsk is discussed. The presence of Listeria in the seawater, sea ice, and sediments on the northeastern Sakhalin shelf and slope supports the idea of its connection with the Amur River discharge. The hypothesis of the allochtonic parentage of L. monocytogenes in the sea’s development is proved.

  1. Mixed and Low-Level Treatment Facility Project. Appendix B, Waste stream engineering files, Part 1, Mixed waste streams

    Energy Technology Data Exchange (ETDEWEB)

    1992-04-01

    This appendix contains the mixed and low-level waste engineering design files (EDFS) documenting each low-level and mixed waste stream investigated during preengineering studies for Mixed and Low-Level Waste Treatment Facility Project. The EDFs provide background information on mixed and low-level waste generated at the Idaho National Engineering Laboratory. They identify, characterize, and provide treatment strategies for the waste streams. Mixed waste is waste containing both radioactive and hazardous components as defined by the Atomic Energy Act and the Resource Conservation and Recovery Act, respectively. Low-level waste is waste that contains radioactivity and is not classified as high-level waste, transuranic waste, spent nuclear fuel, or 11e(2) byproduct material as defined by DOE 5820.2A. Test specimens of fissionable material irradiated for research and development only, and not for the production of power or plutonium, may be classified as low-level waste, provided the concentration of transuranic is less than 100 nCi/g. This appendix is a tool that clarifies presentation format for the EDFS. The EDFs contain waste stream characterization data and potential treatment strategies that will facilitate system tradeoff studies and conceptual design development. A total of 43 mixed waste and 55 low-level waste EDFs are provided.

  2. Study of diffuse H II regions potentially forming part of the gas streams around Sgr A*

    Science.gov (United States)

    Armijos-Abendaño, J.; López, E.; Martín-Pintado, J.; Báez-Rubio, A.; Aravena, M.; Requena-Torres, M. A.; Martín, S.; Llerena, M.; Aldás, F.; Logan, C.; Rodríguez-Franco, A.

    2018-05-01

    We present a study of diffuse extended ionized gas towards three clouds located in the Galactic Centre (GC). One line of sight (LOS) is towards the 20 km s-1 cloud (LOS-0.11) in the Sgr A region, another LOS is towards the 50 km s-1 cloud (LOS-0.02), also in Sgr A, while the third is towards the Sgr B2 cloud (LOS+0.693). The emission from the ionized gas is detected from Hnα and Hmβ radio recombination lines (RRLs). Henα and Hemβ RRL emission is detected with the same n and m as those from the hydrogen RRLs only towards LOS+0.693. RRLs probe gas with positive and negative velocities towards the two Sgr A sources. The Hmβ to Hnα ratios reveal that the ionized gas is emitted under local thermodynamic equilibrium conditions in these regions. We find a He to H mass fraction of 0.29±0.01 consistent with the typical GC value, supporting the idea that massive stars have increased the He abundance compared to its primordial value. Physical properties are derived for the studied sources. We propose that the negative velocity component of both Sgr A sources is part of gas streams considered previously to model the GC cloud kinematics. Associated massive stars with what are presumably the closest H II regions to LOS-0.11 (positive velocity gas), LOS-0.02, and LOS+0.693 could be the main sources of ultraviolet photons ionizing the gas. The negative velocity components of both Sgr A sources might be ionized by the same massive stars, but only if they are in the same gas stream.

  3. Linking land-use type and stream water quality using spatial data of fecal indicator bacteria and heavy metals in the Yeongsan river basin.

    Science.gov (United States)

    Kang, Joo-Hyon; Lee, Seung Won; Cho, Kyung Hwa; Ki, Seo Jin; Cha, Sung Min; Kim, Joon Ha

    2010-07-01

    This study reveals land-use factors that explain stream water quality during wet and dry weather conditions in a large river basin using two different linear models-multiple linear regression (MLR) models and constrained least squares (CLS) models. Six land-use types and three topographical parameters (size, slope, and permeability) of the watershed were incorporated into the models as explanatory variables. The suggested models were then demonstrated using a digitized elevation map in conjunction with the land-use and the measured concentration data for Escherichia coli (EC), Enterococci bacteria (ENT), and six heavy metal species collected monthly during 2007-2008 at 50 monitoring sites in the Yeongsan Watershed, Korea. The results showed that the MLR models can be a powerful tool for predicting the average concentrations of pollutants in stream water (the Nash-Sutcliffe (NS) model efficiency coefficients ranged from 0.67 to 0.95). On the other hand, the CLS models, with moderately good prediction performance (the NS coefficients ranged 0.28-0.85), were more suitable for quantifying contributions of respective land-uses to the stream water quality. The CLS models suggested that industrial and urban land-uses are major contributors to the stream concentrations of EC and ENT, whereas agricultural, industrial, and mining areas were significant sources of many heavy metal species. In addition, the slope, size, and permeability of the watershed were found to be important factors determining the extent of the contribution from each land-use type to the stream water quality. The models proposed in this paper can be considered useful tools for developing land cover guidelines and for prioritizing locations for implementing management practices to maintain stream water quality standard in a large river basin. Copyright 2010 Elsevier Ltd. All rights reserved.

  4. Lactic Acid Bacteria Selection for Biopreservation as a Part of Hurdle Technology Approach Applied on Seafood

    Directory of Open Access Journals (Sweden)

    Norman Wiernasz

    2017-05-01

    Full Text Available As fragile food commodities, microbial, and organoleptic qualities of fishery and seafood can quickly deteriorate. In this context, microbial quality and security improvement during the whole food processing chain (from catch to plate, using hurdle technology, a combination of mild preserving technologies such as biopreservation, modified atmosphere packaging, and superchilling, are of great interest. As natural flora and antimicrobial metabolites producers, lactic acid bacteria (LAB are commonly studied for food biopreservation. Thirty-five LAB known to possess interesting antimicrobial activity were selected for their potential application as bioprotective agents as a part of hurdle technology applied to fishery products. The selection approach was based on seven criteria including antimicrobial activity, alteration potential, tolerance to chitosan coating, and superchilling process, cross inhibition, biogenic amines production (histamine, tyramine, and antibiotics resistance. Antimicrobial activity was assessed against six common spoiling bacteria in fishery products (Shewanella baltica, Photobacterium phosphoreum, Brochothrix thermosphacta, Lactobacillus sakei, Hafnia alvei, Serratia proteamaculans and one pathogenic bacterium (Listeria monocytogenes in co-culture inhibitory assays miniaturized in 96-well microtiter plates. Antimicrobial activity and spoilage evaluation, both performed in cod and salmon juice, highlighted the existence of sensory signatures and inhibition profiles, which seem to be species related. Finally, six LAB with no unusual antibiotics resistance profile nor histamine production ability were selected as bioprotective agents for further in situ inhibitory assays in cod and salmon based products, alone or in combination with other hurdles (chitosan, modified atmosphere packing, and superchilling.

  5. 40 CFR Appendix B to Part 414 - Complexed Metal-Bearing Waste Streams

    Science.gov (United States)

    2010-07-01

    ... 414—Complexed Metal-Bearing Waste Streams Chromium Azo dye intermediates/Substituted diazonium salts + coupling compounds Vat dyes Acid dyes Azo dyes, metallized/Azo dye + metal acetate Acid dyes, Azo...

  6. Examining microbial community response to a strong chemical gradient: the effects of surface coal mining on stream bacteria

    Science.gov (United States)

    Bier, R.; Lindberg, T. T.; Wang, S.; Ellis, J. C.; Di Giulio, R. T.; Bernhardt, E. S.

    2012-12-01

    Surface coal mining is the dominant form of land cover change in northern and central Appalachia. In this process, shallow coal seams are exposed by removing overlying rock with explosives. The resulting fragmented carbonate rock and coal residues are disposed of in stream valleys. These valley fills generate alkaline mine drainage (AlkMD), dramatically increasing alkalinity, ionic strength, substrate supply (esp. SO42-), and trace element (Mn, Li, Se, U) concentrations in downstream rivers as well as significant losses of sensitive fish and macroinvertebrate species. In prior work within the Mud River, which drains the largest surface mine complex in Appalachia, we found that concentrations of AlkMD increase proportionally with the extent of upstream mining. Here we ask "How do stream microbial communities change along this strong chemical gradient?" We collected surface water and benthic biofilms from 25 stream reaches throughout the Mud River spanning the full range of surface mining impacts, with 0-96% of the contributing watershed area converted to surface coal mines. Microbial communities were collected from biofilms grown on a common substrate (red maple veneers) that were incubated in each stream reach for four months prior to collection in April, 2011. 16S rRNA genes from microbial communities at each study site were examined using 454 sequencing and compared with a generalized UniFrac distance matrix (674 sequence eveness) that was used in statistical analyses. Water chemistry at the sites was sampled monthly from July 2010 to December 2010 and again in April 2011. In April, surface water concentrations of SO42-, Ca2+, Mg2+, and Se2- increased linearly with the extent of upstream mining (all regressions R2 >0.43; pPERMANOVA; p=0.029). Bacterial diversity (OTU richness defined at 3% sequence difference) peaked at intermediate conductivities (600 μS cm-1). Environmental data that correlated significantly with the ordination axes were a variety of surface

  7. Both sulfate-reducing bacteria and Enterobacteriaceae take part in marine biocorrosion of carbon steel.

    Science.gov (United States)

    Bermont-Bouis, D; Janvier, M; Grimont, P A D; Dupont, I; Vallaeys, T

    2007-01-01

    In order to evaluate the part played in biocorrosion by microbial groups other than sulfate-reducing bacteria (SRB), we characterized the phylogenetic diversity of a corrosive marine biofilm attached to a harbour pile structure as well as to carbon steel surfaces (coupons) immersed in seawater for increasing time periods (1 and 8 months). We thus experimentally checked corroding abilities of defined species mixtures. Microbial community analysis was performed using both traditional cultivation techniques and polymerase chain reaction cloning-sequencing of 16S rRNA genes. Community structure of biofilms developing with time on immersed coupons tended to reach after 8 months, a steady state similar to the one observed on a harbour pile structure. Phylogenetic affiliations of isolates and cloned 16S rRNA genes (rrs) indicated that native biofilms (developing after 1-month immersion) were mainly colonized by gamma-proteobacteria. Among these, Vibrio species were detected in majority with molecular methods while cultivation techniques revealed dominance of Enterobacteriaceae such as Citrobacter, Klebsiella and Proteus species. Conversely, in mature biofilms (8-month immersion and pile structure), SRB, and to a lesser extent, spirochaetes were dominant. Corroding activity detection assays confirmed that Enterobacteriaceae (members of the gamma-proteobacteria) were involved in biocorrosion of metallic material in marine conditions. In marine biofilms, metal corrosion may be initiated by Enterobacteriaceae.

  8. Flow under standing waves Part 1. Shear stress distribution, energy flux and steady streaming

    DEFF Research Database (Denmark)

    Gislason, Kjartan; Fredsøe, Jørgen; Deigaard, Rolf

    2009-01-01

    The conditions for energy flux, momentum flux and the resulting streaming velocity are analysed for standing waves formed in front of a fully reflecting wall. The exchange of energy between the outer wave motion and the near bed oscillatory boundary layer is considered, determining the horizontal...... energy flux inside and outside the boundary layer. The momentum balance, the mean shear stress and the resulting time averaged streaming velocities are determined. For a laminar bed boundary layer the analysis of the wave drift gives results similar to the original work of Longuet-Higgins from 1953......-dimensional simulations of standing waves have also been made by application of a general purpose Navier-Stokes solver. The results agree well with those obtained by the boundary layer analysis. Wave reflection from a plane sloping wall is also investigated by using the same numerical model and by physical laboratory...

  9. Frequency-Dependent Streaming Potential of Porous Media—Part 2: Experimental Measurement of Unconsolidated Materials

    Directory of Open Access Journals (Sweden)

    P. W. J. Glover

    2012-01-01

    Full Text Available Frequency-dependent streaming potential coefficient measurements have been made upon Ottawa sand and glass bead packs using a new apparatus that is based on an electromagnetic drive. The apparatus operates in the range 1 Hz to 1 kHz with samples of 25.4 mm diameter up to 150 mm long. The results have been analysed using theoretical models that are either (i based upon vibrational mechanics, (ii treat the geological material as a bundle of capillary tubes, or (iii treat the material as a porous medium. The best fit was provided by the Pride model and its simplification, which is satisfying as this model was conceived for porous media rather than capillary tube bundles. Values for the transition frequency were derived from each of the models for each sample and were found to be in good agreement with those expected from the independently measured effective pore radius of each material. The fit to the Pride model for all four samples was also found to be consistent with the independently measured steady-state permeability, while the value of the streaming potential coefficient in the low-frequency limit was found to be in good agreement with other steady-state streaming potential coefficient data.

  10. Frequency-Dependent Streaming Potential of Porous Media—Part 1: Experimental Approaches and Apparatus Design

    Directory of Open Access Journals (Sweden)

    P. W. J. Glover

    2012-01-01

    Full Text Available Electrokinetic phenomena link fluid flow and electrical flow in porous and fractured media such that a hydraulic flow will generate an electrical current and vice versa. Such a link is likely to be extremely useful, especially in the development of the electroseismic method. However, surprisingly few experimental measurements have been carried out, particularly as a function of frequency because of their difficulty. Here we have considered six different approaches to make laboratory determinations of the frequency-dependent streaming potential coefficient. In each case, we have analyzed the mechanical, electrical, and other technical difficulties involved in each method. We conclude that the electromagnetic drive is currently the only approach that is practicable, while the piezoelectric drive may be useful for low permeability samples and at specified high frequencies. We have used the electro-magnetic drive approach to design, build, and test an apparatus for measuring the streaming potential coefficient of unconsolidated and disaggregated samples such as sands, gravels, and soils with a diameter of 25.4 mm and lengths between 50 mm and 300 mm.

  11. Underground Corrosion by Microorganisms Part II : Role of Anaerobic Sulphate Reducing Bacteria-Desulfotomaculum SP

    OpenAIRE

    H. M. Dayal; K. C. Tiwari; Kamlesh Mehta; Mr. Chandrashekhar

    1988-01-01

    During the course of studies on the corrosion causing soil microflora from different geoclimatic regions of India, several strains of anaerobic sulphate reducing bacteria belonging to genus Desulfotomaculum were isolated and characterised. Their corrosive action on mild steel, galvanised iron and structural aluminium, the three main metals of construction of underground structures, have been studied under laboratory conditions.

  12. Selected Metals in Sediments and Streams in the Oklahoma Part of the Tri-State Mining District, 2000-2006

    Science.gov (United States)

    Andrews, William J.; Becker, Mark F.; Mashburn, Shana L.; Smith, S. Jerrod

    2009-01-01

    The abandoned Tri-State mining district includes 1,188 square miles in northeastern Oklahoma, southeastern Kansas, and southwestern Missouri. The most productive part of the Tri-State mining district was the 40-square mile part in Oklahoma, commonly referred to as 'the Picher mining district' in north-central Ottawa County, Oklahoma. The Oklahoma part of the Tri-State mining district was a primary producing area of lead and zinc in the United States during the first half of the 20th century. Sulfide minerals of cadmium, iron, lead, and zinc that remained in flooded underground mine workings and in mine tailings on the land surface oxidized and dissolved with time, forming a variety of oxide, hydroxide, and hydroxycarbonate metallic minerals on the land surface and in streams that drain the district. Metals in water and sediments in streams draining the mining district can potentially impair the habitat and health of many forms of aquatic and terrestrial life. Lakebed, streambed and floodplain sediments and/or stream water were sampled at 30 sites in the Oklahoma part of the Tri-State mining district by the U.S. Geological Survey and the Oklahoma Department of Environmental Quality from 2000 to 2006 in cooperation with the U.S. Environmental Protection Agency, and the Quapaw and Seneca-Cayuga Tribes of Oklahoma. Aluminum and iron concentrations of several thousand milligrams per kilogram were measured in sediments collected from the upstream end of Grand Lake O' the Cherokees. Manganese and zinc concentrations in those sediments were several hundred milligrams per kilogram. Lead and cadmium concentrations in those sediments were about 10 percent and 0.1 percent of zinc concentrations, respectively. Sediment cores collected in a transect across the floodplain of Tar Creek near Miami, Oklahoma, in 2004 had similar or greater concentrations of those metals than sediment cores collected at the upstream end of Grand Lake O' the Cherokees. The greatest concentrations of

  13. Suppression of Emergence of Resistance in Pathogenic Bacteria: Keeping Our Powder Dry, Part 1.

    Science.gov (United States)

    Drusano, G L; Louie, Arnold; MacGowan, Alasdair; Hope, William

    2015-12-28

    We are in a crisis of bacterial resistance. For economic reasons, most pharmaceutical companies are abandoning antimicrobial discovery efforts, while, in health care itself, infection control and antibiotic stewardship programs have generally failed to prevent the spread of drug-resistant bacteria. At this point, what can be done? The first step has been taken. Governments and international bodies have declared there is a worldwide crisis in antibiotic drug resistance. As discovery efforts begin anew, what more can be done to protect newly developing agents and improve the use of new drugs to suppress resistance emergence? A neglected path has been the use of recent knowledge regarding antibiotic dosing as single agents and in combination to minimize resistance emergence, while also providing sufficient early bacterial kill. In this review, we look at the data for resistance suppression. Approaches include increasing the intensity of therapy to suppress resistant subpopulations; developing concepts of clinical breakpoints to include issues surrounding suppression of resistance; and paying attention to the duration of therapy, which is another important issue for resistance suppression. New understanding of optimizing combination therapy is of interest for difficult-to-treat pathogens like Pseudomonas aeruginosa, Acinetobacter spp., and multidrug-resistant (MDR) Enterobacteriaceae. These lessons need to be applied to our old drugs to preserve them as well and need to be put into national and international antibiotic resistance strategies. As importantly, from a regulatory perspective, new chemical entities should have a corresponding resistance suppression plan at the time of regulatory review. In this way, we can make the best of our current situation and improve future prospects. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  14. Suppression of Emergence of Resistance in Pathogenic Bacteria: Keeping Our Powder Dry, Part 2.

    Science.gov (United States)

    Drusano, G L; Hope, William; MacGowan, Alasdair; Louie, Arnold

    2015-12-28

    We are in a crisis of bacterial resistance. For economic reasons, most pharmaceutical companies are abandoning antimicrobial discovery efforts, while, in health care itself, infection control and antibiotic stewardship programs have generally failed to prevent the spread of drug-resistant bacteria. At this point, what can be done? The first step has been taken. Governments and international bodies have declared there is a worldwide crisis in antibiotic drug resistance. As discovery efforts begin anew, what more can be done to protect newly developing agents and improve the use of new drugs to suppress resistance emergence? A neglected path has been the use of recent knowledge regarding antibiotic dosing as single agents and in combination to minimize resistance emergence, while also providing sufficient early bacterial kill. In this review, we look at the data for resistance suppression. Approaches include increasing the intensity of therapy to suppress resistant subpopulations; developing concepts of clinical breakpoints to include issues surrounding suppression of resistance; and paying attention to the duration of therapy, which is another important issue for resistance suppression. New understanding of optimizing combination therapy is of interest for difficult-to-treat pathogens like Pseudomonas aeruginosa, Acinetobacter spp., and multidrug-resistant (MDR) Enterobacteriaceae. These lessons need to be applied to our old drugs as well to preserve them and to be put into national and international antibiotic resistance strategies. As importantly, from a regulatory perspective, new chemical entities should have a resistance suppression plan at the time of regulatory review. In this way, we can make the best of our current situation and improve future prospects. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

  15. Temporal and spatial variations in total suspended and dissolved solids in the upper part of Manoa stream, Hawaii

    NARCIS (Netherlands)

    Augustijn, Dionysius C.M.; Fares, Ali; Tran, Dai Ngia

    2011-01-01

    Hawaiian watersheds are small, steep, and receive high intensity rainfall events of non-uniform distribution. These geographic and weather patterns result in flashy streams of strongly variable water quality even within various stream segments. Total suspended solids (TSS) and total dissolved solids

  16. Contaminants in stream sediments from seven United States metropolitan areas: part I: distribution in relation to urbanization

    Science.gov (United States)

    Nowell, Lisa H.; Moran, Patrick W.; Gilliom, Robert J.; Calhoun, Daniel L.; Ingersoll, Christopher G.; Kemble, Nile E.; Kuivila, Kathryn; Phillips, Patrick J.

    2013-01-01

    Organic contaminants and trace elements were measured in bed sediments collected from streams in seven metropolitan study areas across the United States to assess concentrations in relation to urbanization. Polycyclic aromatic hydrocarbons, polychlorinated biphenyls, organochlorine pesticides, the pyrethroid insecticide bifenthrin, and several trace elements were significantly related to urbanization across study areas. Most contaminants (except bifenthrin, chromium, nickel) were significantly related to the total organic carbon (TOC) content of the sediments. Regression models explained 45–80 % of the variability in individual contaminant concentrations using degree of urbanization, sediment-TOC, and study-area indicator variables (which represent the combined influence of unknown factors, such as chemical use or release, that are not captured by available explanatory variables). The significance of one or more study-area indicator variables in all models indicates marked differences in contaminant levels among some study areas, even after accounting for the nationally modeled effects of urbanization and sediment-TOC. Mean probable effect concentration quotients (PECQs) were significantly related to urbanization. Trace elements were the major contributors to mean PECQs at undeveloped sites, whereas organic contaminants, especially bifenthrin, were the major contributors at highly urban sites. Pyrethroids, where detected, accounted for the largest share of the mean PECQ. Part 2 of this series (Kemble et al. 2012) evaluates sediment toxicity to amphipods and midge in relation to sediment chemistry.

  17. Fractionating power and outlet stream polydispersity in asymmetrical flow field-flow fractionation. Part I: isocratic operation.

    Science.gov (United States)

    Williams, P Stephen

    2016-05-01

    Asymmetrical flow field-flow fractionation (As-FlFFF) has become the most commonly used of the field-flow fractionation techniques. However, because of the interdependence of the channel flow and the cross flow through the accumulation wall, it is the most difficult of the techniques to optimize, particularly for programmed cross flow operation. For the analysis of polydisperse samples, the optimization should ideally be guided by the predicted fractionating power. Many experimentalists, however, neglect fractionating power and rely on light scattering detection simply to confirm apparent selectivity across the breadth of the eluted peak. The size information returned by the light scattering software is assumed to dispense with any reliance on theory to predict retention, and any departure of theoretical predictions from experimental observations is therefore considered of no importance. Separation depends on efficiency as well as selectivity, however, and efficiency can be a strong function of retention. The fractionation of a polydisperse sample by field-flow fractionation never provides a perfectly separated series of monodisperse fractions at the channel outlet. The outlet stream has some residual polydispersity, and it will be shown in this manuscript that the residual polydispersity is inversely related to the fractionating power. Due to the strong dependence of light scattering intensity and its angular distribution on the size of the scattering species, the outlet polydispersity must be minimized if reliable size data are to be obtained from the light scattering detector signal. It is shown that light scattering detection should be used with careful control of fractionating power to obtain optimized analysis of polydisperse samples. Part I is concerned with isocratic operation of As-FlFFF, and part II with programmed operation.

  18. Adherence of bacteria to mucus collected from different parts of the reproductive tract of heifers and cows.

    Science.gov (United States)

    Styková, E; Nemcová, R; Valocký, I; Novotný, F; Guba, P

    2013-11-01

    In the present study, we examined the adherence of indigenous vaginal bacteria, probiotic strains, and metritis pathogens to mucus collected from different parts of the reproductive tracts of heifers and cows and compared their adherence with the bacterial adherence to mucus collected from the stomach and large intestine of pigs. Most of the vaginal strains adhered to mucus collected from different parts of the reproductive tract and strongly adhered to gastric mucus, with the exception of Lactobacillus buchneri 24S8. Only Lactobacillus mucosae 29S8, Enterococcus faecium E21, and E. faecium EAC adhered to colonic mucus. Probiotic strains adhered strongly to mucus collected from the reproductive tract and gastric mucus but did not adhere to colonic mucus. Pathogenic strains were adherent to vaginal, uterine horn, and gastric mucus, except Escherichia coli O8:K88ab:H9 (65), Fusobacterium necrophorum, and Gardnerella vaginalis, which adhered to uterine cervix mucus. Only Kocuria kristinae and G. vaginalis adhered to uterine body mucus; E. coli O149:K88ac (EC) adhered to colonic mucus. The strains did not exhibit host specificity but rather strain specificity. The ability to adhere to mucus was a characteristic unique to each strain. To our knowledge, this is the first report regarding in vitro adherence of GRAS (Generally Regarded As Safe) lactobacilli isolated from different sources to mucus collected from different parts of the reproductive tract.

  19. A simple climatology of westerly jet streams in global reanalysis datasets part 1: mid-latitude upper tropospheric jets

    Science.gov (United States)

    Rikus, Lawrie

    2018-04-01

    A simple closed contour object identification scheme has been applied to the zonal mean monthly mean zonal wind fields from nine global reanalysis data sets for 31 years of the satellite era (1979-2009) to identify objects corresponding to westerly jet streams. The results cluster naturally into six individual jet streams but only the mid-latitude upper-tropospheric jets are considered here. The time series of the jet properties from all reanalyses are decomposed into seasonal means and anomalies, and correlations between variables are evaluated, with the aim of identifying robust features which can form the basis of evaluation metrics for climate model simulations of the twentieth century. There is substantial agreement between all the reanalyses for all jet properties although there are some systematic differences with particular data sets. Some of the results from the object identification applied to the reanalyses are used in a simple example of a model evaluation score for the zonal mean jet seasonal cycle.

  20. Bacteria as part of bioluminescence emission at the deep ANTARES station (North-Western Mediterranean Sea) during a one-year survey

    Science.gov (United States)

    Martini, S.; Michotey, V.; Casalot, L.; Bonin, P.; Guasco, S.; Garel, M.; Tamburini, C.

    2016-10-01

    Bioluminescent bacteria have been studied during a one-year survey in 2011 at the deep ANTARES site (Northwestern Mediterranean Sea, 2000 m depth). The neutrino underwater telescope ANTARES, located at this station, has been used to record the bioluminescence at the same depth. Together with these data, environmental variables (potential temperature, salinity, nutrients, dissolved organic carbon and oxygen) have been characterized in water samples. The year 2011 was characterized by relatively stable conditions, as revealed by minor variability in the monitored oceanographic variables, by low bioluminescence and low current speed. This suggests weak eukaryote participation and mainly non-stimulated light emission. Hence, no processes of dense water have affected the ANTARES station during this survey. Abundance of bioluminescent bacteria belonging to Photobacterium genus, measured by qPCR of the luxF gene, ranged from 1.4×102 to 7.2×102 genes mL-1. Their effective activity was confirmed through mRNA luxF quantification. Our results reveal that bioluminescent bacteria appeared more active than the total counterpart of bacteria, suggesting an ecological benefit of this feature such as favoring interaction with macro-organisms. Moreover, these results show that part of the bioluminescence, recorded at 2000 m depth over one year, could be due to bioluminescent bacteria in stable hydrological conditions.

  1. Experiments in a boundary layer subjected to free stream turbulence. Part 1: Boundary layer structure and receptivity

    International Nuclear Information System (INIS)

    Westin, K.J.A.; Boiko, A.V.; Klingmann, B.G.B.; Kozlov, V.V.; Alfredsson, P.H.

    1993-12-01

    The modification of the mean and fluctuating characteristics of a flat plate boundary layer subjected to nearly isotropic free stream turbulence (FST) is studied experimentally using hot-wire anemometry. The study is focussed on the region upstream of the transition onset, where the fluctuations inside the boundary layer are dominated by elongated flow structures which grow downstream both in amplitude and length. Their downstream development and scaling is investigated, and the results are compared to those obtained by previous authors. This allows some conclusions about the parameters which are relevant for the modelling of the transition process. The mechanisms underlying the transition process and the relative importance of the Tollmien-Schlichting wave instability in this flow are treated in an accompanying paper. 25 refs

  2. Streams with Strahler Stream Order

    Data.gov (United States)

    Minnesota Department of Natural Resources — Stream segments with Strahler stream order values assigned. As of 01/08/08 the linework is from the DNR24K stream coverages and will not match the updated...

  3. Production of glycolipidic bio surfactants by environment bacteria: diversity and physiological part; Production de biosurfactants glycolipidiques par les bacteries de l`environnement: diversite et role physiologique

    Energy Technology Data Exchange (ETDEWEB)

    Arino, S

    1996-10-09

    About a hundred bacterial strains, isolated from soils, polluted or not by hydrocarbons, were tested for their capacity to excrete glycosides. The biggest productions were obtained for a soluble carbon source (glycerol) in a culture medium limited in the nitrogen source. In these conditions, 18 g/l of rhamnose lipids were produced by train Pseudomonas aeruginosa GL1 in a 200 h culture. Pseudomonas aeruginosa GL1, Cellulomonas celulans SA43 and Rhodococcus erythropolis DSM 43060 were studied in detail. The bio-surfactants produced were identified respectively as rhamnose lipids, oligosaccharide lipids and trehalose lipids, using various original analytical methods. Sugars and fatty acids composing these glycolipids had been shown to be usual components of the outer part of the cell wall in these microbial species. Moreover, cell hydrophobicity of the producing bacteria varied in time during culture. These results showed that both the cell wall and the extracellular glycolipids take part in the process of hydrocarbon uptake in the polluted environments. As other bacteria of the same species from different origins present the same characteristics, it may be concluded that glycolipid excretion does not constitute a specific response for hydrocarbon assimilation. In fact, a more general physiological role of glycolipids, concerning modifications of hydrophobic interfaces between the producing bacteria and their surrounding environment, could explain the production of glycolipids, and could also be utilized in hydrocarbon uptake. (author)

  4. Study on the overview on foodborne bacteria in food with animal origin in Iran; Part four: Poultry and egg

    Directory of Open Access Journals (Sweden)

    S.S Shekarforoush

    2013-05-01

    Full Text Available In this study, the contamination of poultry meat and eggs to pathogenic bacteria was investigated in Iran, for over three decades. Health assessment of these two products is highly important due to their high level of consumption and consequent health risks of food borne diseases such as salmonellosis. Many reports indicate the presence of majority of pathogenic bacteria such as campylobacter, staphylococci, salmonellas, etc. in the poultry abattoirs across the country. It seems that most of these contaminations had been occurred through cross contamination during slaughtering or other stages of processing. Although many bacterial contaminations have been reported in eggs (e.g., streptococci, staphylococci, or Escherichia coli, most of studies have focused on salmonella as eggs are among the major transmission routes of this bacterium. In several suveys, salmonella has been isolated from the shell of the eggs of native breeds. According to the studies, campylobacter contamination has not been reported. Moreober, occurrence rate with other bacteria species was very low. It seems that due to the high proportions of chicken meat and eggs in the food basket of community, even low levels of contamination could be of great concern. It was concluded that maintaining of hygienic conditions and improving the knowledge of producers in the food production chain could be effective in reducing the overall contamination of pathogenic bacterial.

  5. Surrogate formulations for thermal treatment of low-level mixed waste, Part II: Selected mixed waste treatment project waste streams

    Energy Technology Data Exchange (ETDEWEB)

    Bostick, W.D.; Hoffmann, D.P.; Chiang, J.M.; Hermes, W.H.; Gibson, L.V. Jr.; Richmond, A.A. [Martin Marietta Energy Systems, Inc., Oak Ridge, TN (United States); Mayberry, J. [Science Applications International Corp., Idaho Falls, ID (United States); Frazier, G. [Univ. of Tennessee, Knoxville, TN (United States)

    1994-01-01

    This report summarizes the formulation of surrogate waste packages, representing the major bulk constituent compositions for 12 waste stream classifications selected by the US DOE Mixed Waste Treatment Program. These waste groupings include: neutral aqueous wastes; aqueous halogenated organic liquids; ash; high organic content sludges; adsorbed aqueous and organic liquids; cement sludges, ashes, and solids; chloride; sulfate, and nitrate salts; organic matrix solids; heterogeneous debris; bulk combustibles; lab packs; and lead shapes. Insofar as possible, formulation of surrogate waste packages are referenced to authentic wastes in inventory within the DOE; however, the surrogate waste packages are intended to represent generic treatability group compositions. The intent is to specify a nonradiological synthetic mixture, with a minimal number of readily available components, that can be used to represent the significant challenges anticipated for treatment of the specified waste class. Performance testing and evaluation with use of a consistent series of surrogate wastes will provide a means for the initial assessment (and intercomparability) of candidate treatment technology applicability and performance. Originally the surrogate wastes were intended for use with emerging thermal treatment systems, but use may be extended to select nonthermal systems as well.

  6. Surrogate formulations for thermal treatment of low-level mixed waste, Part II: Selected mixed waste treatment project waste streams

    International Nuclear Information System (INIS)

    Bostick, W.D.; Hoffmann, D.P.; Chiang, J.M.; Hermes, W.H.; Gibson, L.V. Jr.; Richmond, A.A.; Mayberry, J.; Frazier, G.

    1994-01-01

    This report summarizes the formulation of surrogate waste packages, representing the major bulk constituent compositions for 12 waste stream classifications selected by the US DOE Mixed Waste Treatment Program. These waste groupings include: neutral aqueous wastes; aqueous halogenated organic liquids; ash; high organic content sludges; adsorbed aqueous and organic liquids; cement sludges, ashes, and solids; chloride; sulfate, and nitrate salts; organic matrix solids; heterogeneous debris; bulk combustibles; lab packs; and lead shapes. Insofar as possible, formulation of surrogate waste packages are referenced to authentic wastes in inventory within the DOE; however, the surrogate waste packages are intended to represent generic treatability group compositions. The intent is to specify a nonradiological synthetic mixture, with a minimal number of readily available components, that can be used to represent the significant challenges anticipated for treatment of the specified waste class. Performance testing and evaluation with use of a consistent series of surrogate wastes will provide a means for the initial assessment (and intercomparability) of candidate treatment technology applicability and performance. Originally the surrogate wastes were intended for use with emerging thermal treatment systems, but use may be extended to select nonthermal systems as well

  7. A comparison between ultraviolet disinfection and copper alginate beads within a vortex bioreactor for the deactivation of bacteria in simulated waste streams with high levels of colour, humic acid and suspended solids.

    Directory of Open Access Journals (Sweden)

    Simon F Thomas

    Full Text Available We show in this study that the combination of a swirl flow reactor and an antimicrobial agent (in this case copper alginate beads is a promising technique for the remediation of contaminated water in waste streams recalcitrant to UV-C treatment. This is demonstrated by comparing the viability of both common and UV-C resistant organisms in operating conditions where UV-C proves ineffective - notably high levels of solids and compounds which deflect UV-C. The swirl flow reactor is easy to construct from commonly available plumbing parts and may prove a versatile and powerful tool in waste water treatment in developing countries.

  8. A comparison between ultraviolet disinfection and copper alginate beads within a vortex bioreactor for the deactivation of bacteria in simulated waste streams with high levels of colour, humic acid and suspended solids.

    Science.gov (United States)

    Thomas, Simon F; Rooks, Paul; Rudin, Fabian; Atkinson, Sov; Goddard, Paul; Bransgrove, Rachel M; Mason, Paul T; Allen, Michael J

    2014-01-01

    We show in this study that the combination of a swirl flow reactor and an antimicrobial agent (in this case copper alginate beads) is a promising technique for the remediation of contaminated water in waste streams recalcitrant to UV-C treatment. This is demonstrated by comparing the viability of both common and UV-C resistant organisms in operating conditions where UV-C proves ineffective - notably high levels of solids and compounds which deflect UV-C. The swirl flow reactor is easy to construct from commonly available plumbing parts and may prove a versatile and powerful tool in waste water treatment in developing countries.

  9. Assimilation of Altimeter Data into a Quasigeostrophic Model of the Gulf Stream System. Part 2; Assimilation Results

    Science.gov (United States)

    Capotondi, Antonietta; Holland, William R.; Malanotte-Rizzoli, Paola

    1995-01-01

    The improvement in the climatological behavior of a numerical model as a consequence of the assimilation of surface data is investigated. The model used for this study is a quasigeostrophic (QG) model of the Gulf Stream region. The data that have been assimilated are maps of sea surface height that have been obtained as the superposition of sea surface height variability deduced from the Geosat altimeter measurements and a mean field constructed from historical hydrographic data. The method used for assimilating the data is the nudging technique. Nudging has been implemented in such a way as to achieve a high degree of convergence of the surface model fields toward the observations. Comparisons of the assimilation results with available in situ observations show a significant improvement in the degree of realism of the climatological model behavior, with respect to the model in which no data are assimilated. The remaining discrepancies in the model mean circulation seem to be mainly associated with deficiencies in the mean component of the surface data that are assimilated. On the other hand, the possibility of building into the model more realistic eddy characteristics through the assimilation of the surface eddy field proves very successful in driving components of the mean model circulation that are in relatively good agreement with the available observations. Comparisons with current meter time series during a time period partially overlapping the Geosat mission show that the model is able to 'correctly' extrapolate the instantaneous surface eddy signals to depths of approximately 1500 m. The correlation coefficient between current meter and model time series varies from values close to 0.7 in the top 1500 m to values as low as 0.1-0.2 in the deep ocean.

  10. Anaerobic bacteria

    Science.gov (United States)

    Anaerobic bacteria are bacteria that do not live or grow when oxygen is present. In humans, these bacteria ... Brook I. Diseases caused by non-spore-forming anaerobic bacteria. In: Goldman L, Schafer AI, eds. Goldman-Cecil ...

  11. Stream Crossings

    Data.gov (United States)

    Vermont Center for Geographic Information — Physical measurements and attributes of stream crossing structures and adjacent stream reaches which are used to provide a relative rating of aquatic organism...

  12. Akamai Streaming

    OpenAIRE

    ECT Team, Purdue

    2007-01-01

    Akamai offers world-class streaming media services that enable Internet content providers and enterprises to succeed in today's Web-centric marketplace. They deliver live event Webcasts (complete with video production, encoding, and signal acquisition services), streaming media on demand, 24/7 Webcasts and a variety of streaming application services based upon their EdgeAdvantage.

  13. Water-quality assessment of part of the Upper Mississippi River Basin Study Unit, Minnesota and Wisconsin- Nutrients, chlorophyll a, phytoplankton, and suspended sediment in streams, 1996-98

    Science.gov (United States)

    Kroening, Sharon E.; Lee, Kathy E.; Goldstein, R.M.

    2003-01-01

    Stream water-quality data from part of the Upper Mississippi River Basin Study Unit (Study Unit) from 1995 through 1998 was used to describe the distribution of nutrients, chlorophyll a, phytoplankton, and suspended sediment; and the influence of natural and anthropogenic factors on reported concentrations, loads, and yields. During the study period, streamflows generally were near to greater than average. Agricultural land cover, particularly on tile-drained soils, had the most substantial influence on nutrients, chlorophyll a, and suspended sediment in the Study Unit. The greatest concentrations and yields of total nitrogen, dissolved nitrite plus nitrate nitrogen, dissolved nitrite nitrogen, total organic plus ammonia nitrogen, total phosphorus, and suspended sediment were measured in a stream representing agricultural land cover on tile-drained soils. Total nitrogen yields also were about 6 times greater in a stream representing agricultural land cover on tile-drained soils than in a stream representing agricultural land cover on naturally welldrained soils.

  14. Isolation and characterization of heavy metal tolerant bacteria from ...

    African Journals Online (AJOL)

    Panteka stream is a flowing stream polluted with wastes from the activities of mechanics. Water samples collected at different points of the stream were analysed in order to determine the level of heavy metal contamination and bacteria diversity with the view to elucidating the bioremediating potentials of the bacteria isolates ...

  15. LHCb trigger streams optimization

    Science.gov (United States)

    Derkach, D.; Kazeev, N.; Neychev, R.; Panin, A.; Trofimov, I.; Ustyuzhanin, A.; Vesterinen, M.

    2017-10-01

    The LHCb experiment stores around 1011 collision events per year. A typical physics analysis deals with a final sample of up to 107 events. Event preselection algorithms (lines) are used for data reduction. Since the data are stored in a format that requires sequential access, the lines are grouped into several output file streams, in order to increase the efficiency of user analysis jobs that read these data. The scheme efficiency heavily depends on the stream composition. By putting similar lines together and balancing the stream sizes it is possible to reduce the overhead. We present a method for finding an optimal stream composition. The method is applied to a part of the LHCb data (Turbo stream) on the stage where it is prepared for user physics analysis. This results in an expected improvement of 15% in the speed of user analysis jobs, and will be applied on data to be recorded in 2017.

  16. Study on the overview on food borne bacteria in food with animal origin in Iran; Part three: seafood

    Directory of Open Access Journals (Sweden)

    S.S Shekarforoush

    2013-02-01

    Full Text Available The current retrospective study was focused on the contamination of seafood in Iran during the years 1999 to 2012. The isolates were Clostridium botulinum, Clostridium perferingense, Escherichia coli, Listeria monocytogenes, Salmonella, Shigella, Staphylococcus aureus and Vibrio parahemolyticus. C. botulinum type E was the most prevalent type of bacteria in the fisheries products, responsible for the most cases of botulinal food poisoning. The presence of coliforms and E. coli in the seafood was due to environmental pollution. Additionally, in the processed food, the contamination of potable water and poor handling of the products are the main sources. L. monocytogenes was isolated from fresh, frozen and processed food. The microorganism is able to grow in the refrigeration condition and multiply in the processed food. The temperature of cold smoking (20-30 ºC cannot stop growing of Listeria. High prevalence of Salmonella in water and fisheries product was mainly because of the low environmental sanitation and various geographical conditions. However, Compost fertilizer and flowing of the swages through the farms were considered as the major source of contamination. S. aureus is not a typical microorganism of the fisheries farms but may contaminate them during the processing or in-appropriate handling of the products. V. Parahemolyticus is a normal habitant organism of the pelagic area. The organism usually find in the warm water and presents in the tropical conditions. Different species of Vibrio may contaminate the salty water in the warm seasons and so contaminate the aquatics farms in these areas. In general, the prevalence of vibriosis was associated with the consumption of semi-cooked food stuff and/or the secondary contamination of the processed ones.

  17. Applications of multiscale change point detections to monthly stream flow and rainfall in Xijiang River in southern China, part I: correlation and variance

    Science.gov (United States)

    Zhu, Yuxiang; Jiang, Jianmin; Huang, Changxing; Chen, Yongqin David; Zhang, Qiang

    2018-04-01

    This article, as part I, introduces three algorithms and applies them to both series of the monthly stream flow and rainfall in Xijiang River, southern China. The three algorithms include (1) normalization of probability distribution, (2) scanning U test for change points in correlation between two time series, and (3) scanning F-test for change points in variances. The normalization algorithm adopts the quantile method to normalize data from a non-normal into the normal probability distribution. The scanning U test and F-test have three common features: grafting the classical statistics onto the wavelet algorithm, adding corrections for independence into each statistic criteria at given confidence respectively, and being almost objective and automatic detection on multiscale time scales. In addition, the coherency analyses between two series are also carried out for changes in variance. The application results show that the changes of the monthly discharge are still controlled by natural precipitation variations in Xijiang's fluvial system. Human activities disturbed the ecological balance perhaps in certain content and in shorter spells but did not violate the natural relationships of correlation and variance changes so far.

  18. Asteroid/meteorite streams

    Science.gov (United States)

    Drummond, J.

    The independent discovery of the same three streams (named alpha, beta, and gamma) among 139 Earth approaching asteroids and among 89 meteorite producing fireballs presents the possibility of matching specific meteorites to specific asteroids, or at least to asteroids in the same stream and, therefore, presumably of the same composition. Although perhaps of limited practical value, the three meteorites with known orbits are all ordinary chondrites. To identify, in general, the taxonomic type of the parent asteroid, however, would be of great scientific interest since these most abundant meteorite types cannot be unambiguously spectrally matched to an asteroid type. The H5 Pribram meteorite and asteroid 4486 (unclassified) are not part of a stream, but travel in fairly similar orbits. The LL5 Innisfree meteorite is orbitally similar to asteroid 1989DA (unclassified), and both are members of a fourth stream (delta) defined by five meteorite-dropping fireballs and this one asteroid. The H5 Lost City meteorite is orbitally similar to 1980AA (S type), which is a member of stream gamma defined by four asteroids and four fireballs. Another asteroid in this stream is classified as an S type, another is QU, and the fourth is unclassified. This stream suggests that ordinary chondrites should be associated with S (and/or Q) asteroids. Two of the known four V type asteroids belong to another stream, beta, defined by five asteroids and four meteorite-dropping (but unrecovered) fireballs, making it the most probable source of the eucrites. The final stream, alpha, defined by five asteroids and three fireballs is of unknown composition since no meteorites have been recovered and only one asteroid has an ambiguous classification of QRS. If this stream, or any other as yet undiscovered ones, were found to be composed of a more practical material (e.g., water or metalrich), then recovery of the associated meteorites would provide an opportunity for in-hand analysis of a potential

  19. Sediment contamination of residential streams in the metropolitan kansas city area, USA: Part II. whole-sediment toxicity to the amphipod hyalella azteca

    Science.gov (United States)

    Tao, J.; Ingersoll, C.G.; Kemble, N.E.; Dias, J.R.; Murowchick, J.B.; Welker, G.; Huggins, D.

    2010-01-01

    This is the second part of a study that evaluates the influence of nonpoint sources on the sediment quality of five adjacent streams within the metropolitan Kansas City area, central United States. Physical, chemical, and toxicity data (Hyalella azteca 28-day whole-sediment toxicity test) for 29 samples collected in 2003 were used for this evaluation, and the potential causes for the toxic effects were explored. The sediments exhibited a low to moderate toxicity, with five samples identified as toxic to H. azteca. Metals did not likely cause the toxicity based on low concentrations of metals in the pore water and elevated concentrations of acid volatile sulfide in the sediments. Although individual polycyclic aromatic hydrocarbons (PAHs) frequently exceeded effect-based sediment quality guidelines [probable effect concentrations (PECs)], only four of the samples had a PEC quotient (PEC-Q) for total PAHs over 1.0 and only one of these four samples was identified as toxic. For the mean PEC-Q for organochlorine compounds (chlordane, dieldrin, sum DDEs), 4 of the 12 samples with a mean PEC-Q above 1.0 were toxic and 4 of the 8 samples with a mean PEC-Q above 3.0 were toxic. Additionally, four of eight samples were toxic, with a mean PEC-Q above 1.0 based on metals, PAHs, polychlorinated biphenyls (PCBs), and organochlorine pesticides. The increase in the incidence of toxicity with the increase in the mean PEC-Q based on organochlorine pesticides or based on metals, PAHs, PCBs, and organochlorine pesticides suggests that organochlorine pesticides might have contributed to the observed toxicity and that the use of a mean PEC-Q, rather than PEC-Qs for individual compounds, might be more informative in predicting toxic effects. Our study shows that stream sediments subject to predominant nonpoint sources contamination can be toxic and that many factors, including analysis of a full suite of PAHs and pesticides of both past and present urban applications and the origins of

  20. Evaluation of Inhibitory and Lethal Effects of Aqueous, Ethanolic and Hydroalcoholic Extracts of Aerial Parts of Salvia chorassanica against Some Gram-negative and Gram-positive Bacteria in Vitro

    Directory of Open Access Journals (Sweden)

    Azam Mehraban

    2016-05-01

    Full Text Available Abstract Background and Objectives: Development of bacterial resistance to antibiotics has led to an increased tendency to development of new more effective and non-toxic antimicrobial compounds. In this study, the inhibitory and lethal effects of aqueous, ethanolic, and hydroalcoholic extracts of aerial parts of Salvia chorassanica were evaluated against Listeria monocytogenes, Bacillus cereus, Salmonella typhi, and Escherichia coli O:157. Methods: In this study, Kirby–Bauer disk diffusion method was used to evaluate antimicrobial activity. In this method, bacteria were cultivated as grass culture in Mueller Hinton Agar (MHA media. To determine the minimum inhibitory concentration and minimum bactericidal concentration, micro-dilution method with ELISA and addition of phenyl tetrazolium chloride reagent, were used. Data were analyzed using one-way ANOVA and Duncan’s test at the significance level of p<0.05. Results: The highest diameter of inhibition in agar diffusion method was related to hydroalcoholic extract of aerial parts of Salvia chorassanica against Gram-positive bacteria Bacillus cereus. The amount of calculated MIC of hydro-alcoholic extract for Gram-positive bacteria was 30mg/ml. This amount was the lowest among other measured MIC. Conclusion: Based on the results of this study, Gram-negative bacteria showed more resistance to different extracts of aerial parts of Salvia chorassanica as compared to Gram-positive bacteria, so that Salmonella typhi was found to be the most resistant bacterium among the tested bacteria.

  1. Stream systems.

    Science.gov (United States)

    Jack E. Williams; Gordon H. Reeves

    2006-01-01

    Restored, high-quality streams provide innumerable benefits to society. In the Pacific Northwest, high-quality stream habitat often is associated with an abundance of salmonid fishes such as chinook salmon (Oncorhynchus tshawytscha), coho salmon (O. kisutch), and steelhead (O. mykiss). Many other native...

  2. A community model of ciliate Tetrahymena and bacteria E. coli. Part 1: Individual-based models of Tetrahymena and E. coli populations

    Energy Technology Data Exchange (ETDEWEB)

    Jaworska, J.S.; Hallam, T.G.; Schultz, T.W. [Univ. of Tennessee, Knoxville, TN (United States)

    1996-03-01

    The dynamics of a microbial community consisting of a eucaryotic ciliate Tetrahymena pyriformis and procaryotic. Escherichia coli in a batch culture is explored by employing an individual-based approach. In this portion of the article, Part 1, population models are presented. Because both models are individual-based, models of individual organisms are developed prior to construction of the population models. The individual models use an energy budget method in which growth depends on energy gain from feeding and energy sinks such as maintenance and reproduction. These models are not limited by simplifying assumptions about constant yield, constant energy sinks and Monod growth kinetics as are traditional models of microbial organisms. Population models are generated from individual models by creating distinct individual types and assigning to each type the number of real individuals they represent. A population is a compilation of individual types that vary in a phase of cell cycle and physiological parameters such as filtering rate for ciliates and maximum anabolic rate for bacteria. An advantage of the developed models is that they realistically describe the growth of the individual cells feeding on resource which varies in density and composition. Part 2, the core of the project, integrates models into a dynamic microbial community and provides model analysis based upon available data.

  3. Cable Bacteria in Freshwater Sediments

    DEFF Research Database (Denmark)

    Risgaard-Petersen, Nils; Kristiansen, Michael; Frederiksen, Rasmus

    2015-01-01

    In marine sediments cathodic oxygen reduction at the sediment surface can be coupled to anodic sulfide oxidation in deeper anoxic layers through electrical currents mediated by filamentous, multicellular bacteria of the Desulfobulbaceae family, the so-called cable bacteria. Until now, cable...... bacteria have only been reported from marine environments. In this study, we demonstrate that cable bacteria also occur in freshwater sediments. In a first step, homogenized sediment collected from the freshwater stream Giber Å, Denmark, was incubated in the laboratory. After 2 weeks, pH signatures...... marine cable bacteria, with the genus Desulfobulbus as the closest cultured lineage. The results of the present study indicate that electric currents mediated by cable bacteria could be important for the biogeochemistry in many more environments than anticipated thus far and suggest a common evolutionary...

  4. Stream Evaluation

    Data.gov (United States)

    Kansas Data Access and Support Center — Digital representation of the map accompanying the "Kansas stream and river fishery resource evaluation" (R.E. Moss and K. Brunson, 1981.U.S. Fish and Wildlife...

  5. Development of Land Segmentation, Stream-Reach Network, and Watersheds in Support of Hydrological Simulation Program-Fortran (HSPF) Modeling, Chesapeake Bay Watershed, and Adjacent Parts of Maryland, Delaware, and Virginia

    Science.gov (United States)

    Martucci, Sarah K.; Krstolic, Jennifer L.; Raffensperger, Jeff P.; Hopkins, Katherine J.

    2006-01-01

    The U.S. Geological Survey, U.S. Environmental Protection Agency Chesapeake Bay Program Office, Interstate Commission on the Potomac River Basin, Maryland Department of the Environment, Virginia Department of Conservation and Recreation, Virginia Department of Environmental Quality, and the University of Maryland Center for Environmental Science are collaborating on the Chesapeake Bay Regional Watershed Model, using Hydrological Simulation Program - FORTRAN to simulate streamflow and concentrations and loads of nutrients and sediment to Chesapeake Bay. The model will be used to provide information for resource managers. In order to establish a framework for model simulation, digital spatial datasets were created defining the discretization of the model region (including the Chesapeake Bay watershed, as well as the adjacent parts of Maryland, Delaware, and Virginia outside the watershed) into land segments, a stream-reach network, and associated watersheds. Land segmentation was based on county boundaries represented by a 1:100,000-scale digital dataset. Fifty of the 254 counties and incorporated cities in the model region were divided on the basis of physiography and topography, producing a total of 309 land segments. The stream-reach network for the Chesapeake Bay watershed part of the model region was based on the U.S. Geological Survey Chesapeake Bay SPARROW (SPAtially Referenced Regressions On Watershed attributes) model stream-reach network. Because that network was created only for the Chesapeake Bay watershed, the rest of the model region uses a 1:500,000-scale stream-reach network. Streams with mean annual streamflow of less than 100 cubic feet per second were excluded based on attributes from the dataset. Additional changes were made to enhance the data and to allow for inclusion of stream reaches with monitoring data that were not part of the original network. Thirty-meter-resolution Digital Elevation Model data were used to delineate watersheds for each

  6. STREAM2016: Streaming Requirements, Experience, Applications and Middleware Workshop

    Energy Technology Data Exchange (ETDEWEB)

    Fox, Geoffrey [Indiana Univ., Bloomington, IN (United States); Jha, Shantenu [Rutgers Univ., New Brunswick, NJ (United States); Ramakrishnan, Lavanya [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)

    2016-10-01

    The Department of Energy (DOE) Office of Science (SC) facilities including accelerators, light sources and neutron sources and sensors that study, the environment, and the atmosphere, are producing streaming data that needs to be analyzed for next-generation scientific discoveries. There has been an explosion of new research and technologies for stream analytics arising from the academic and private sectors. However, there has been no corresponding effort in either documenting the critical research opportunities or building a community that can create and foster productive collaborations. The two-part workshop series, STREAM: Streaming Requirements, Experience, Applications and Middleware Workshop (STREAM2015 and STREAM2016), were conducted to bring the community together and identify gaps and future efforts needed by both NSF and DOE. This report describes the discussions, outcomes and conclusions from STREAM2016: Streaming Requirements, Experience, Applications and Middleware Workshop, the second of these workshops held on March 22-23, 2016 in Tysons, VA. STREAM2016 focused on the Department of Energy (DOE) applications, computational and experimental facilities, as well software systems. Thus, the role of “streaming and steering” as a critical mode of connecting the experimental and computing facilities was pervasive through the workshop. Given the overlap in interests and challenges with industry, the workshop had significant presence from several innovative companies and major contributors. The requirements that drive the proposed research directions, identified in this report, show an important opportunity for building competitive research and development program around streaming data. These findings and recommendations are consistent with vision outlined in NRC Frontiers of Data and National Strategic Computing Initiative (NCSI) [1, 2]. The discussions from the workshop are captured as topic areas covered in this report's sections. The report

  7. Application of streaming potential method for detection of fractures in granitic rock. part 2; Kamaishi kozan ni okeru ryutai ryudo den`iho tekiyo shiken. 2

    Energy Technology Data Exchange (ETDEWEB)

    Negi, T; Yoneda, Y [Nittetsu Mining Co. Ltd., Tokyo (Japan); Senba, T [Power Reactor and Nuclear Fuel Development Corp., Tokyo (Japan)

    1997-10-22

    Streaming potential method has been applied in the Kamaishi Mine. In FY 1995, self-potential (SP) was monitored on the wall of gallery by varying the pressure in the well with open/close operation of the mouth of well having spring water, which was drilled from the gallery. It was confirmed that SP changes remarkably at the wall having a great number of fractures with spring water. It was considered that the change in SP is due to the streaming potential generated by the flowing underground water from the gallery side to the fractures in the well. In this paper, this continuity of the wall of gallery and the fractures in the well is estimated. In the present tests, SP changes were observed at walls of surrounding galleries by varying the pressure in the well with open/close operation of the mouth of borehole at various drilling depths during drilling of borehole. As a result, SP changes were observed at the wall of gallery when reaching to the depth with increased spring water. The results agreed well with the test results conducted at the same field in FY 1995. It was confirmed that the streaming potential method is a useful method for grasping the hydraulic continuity in the rocks. 2 refs., 9 figs.

  8. Acoustofluidics 14: Applications of acoustic streaming in microfluidic devices.

    Science.gov (United States)

    Wiklund, Martin; Green, Roy; Ohlin, Mathias

    2012-07-21

    In part 14 of the tutorial series "Acoustofluidics--exploiting ultrasonic standing wave forces and acoustic streaming in microfluidic systems for cell and particle manipulation", we provide a qualitative description of acoustic streaming and review its applications in lab-on-a-chip devices. The paper covers boundary layer driven streaming, including Schlichting and Rayleigh streaming, Eckart streaming in the bulk fluid, cavitation microstreaming and surface-acoustic-wave-driven streaming.

  9. Water quality of streams in Johnson County, Kansas, 2002-07

    Science.gov (United States)

    Rasmussen, T.J.

    2009-01-01

    Water quality of streams in Johnson County, Kansas was evaluated from October 2002 through December 2007 in a cooperative study between the U.S. Geological Survey and the Johnson County Stormwater Management Program. Water quality at 42 stream sites, representing urban and rural basins, was characterized by evaluating benthic macroinvertebrates, water (discrete and continuous data), and/or streambed sediment. Point and nonpoint sources and transport were described for water-quality constituents including suspended sediment, dissolved solids and major ions, nutrients (nitrogen and phosphorus), indicator bacteria, pesticides, and organic wastewater and pharmaceutical compounds. The information obtained from this study is being used by city and county officials to develop effective management plans for protecting and improving stream quality. This fact sheet summarizes important results from three comprehensive reports published as part of the study and available on the World Wide Web at http://ks.water.usgs.gov/Kansas/studies/qw/joco/. ?? 2009 ASCE.

  10. Waste streams from reprocessing operations

    International Nuclear Information System (INIS)

    Andersson, B.; Ericsson, A.-M.

    1978-03-01

    The three main products from reprocessing operations are uranium, plutonium and vitrified high-level-waste. The purpose of this report is to identify and quantify additional waste streams containing radioactive isotops. Special emphasis is laid on Sr, Cs and the actinides. The main part, more than 99 % of both the fission-products and the transuranic elements are contained in the HLW-stream. Small quantities sometimes contaminate the U- and Pu-streams and the rest is found in the medium-level-waste

  11. Big bacteria

    DEFF Research Database (Denmark)

    Schulz, HN; Jørgensen, BB

    2001-01-01

    A small number of prokaryotic species have a unique physiology or ecology related to their development of unusually large size. The biomass of bacteria varies over more than 10 orders of magnitude, from the 0.2 mum wide nanobacteria to the largest cells of the colorless sulfur bacteria......, Thiomargarita namibiensis, with a diameter of 750 mum. All bacteria, including those that swim around in the environment, obtain their food molecules by molecular diffusion. Only the fastest and largest swimmers known, Thiovulum majus, are able to significantly increase their food supply by motility...... and by actively creating an advective flow through the entire population. Diffusion limitation generally restricts the maximal size of prokaryotic cells and provides a selective advantage for mum-sized cells at the normally low substrate concentrations in the environment. The largest heterotrophic bacteria...

  12. Big bacteria

    DEFF Research Database (Denmark)

    Schulz, HN; Jørgensen, BB

    2001-01-01

    A small number of prokaryotic species have a unique physiology or ecology related to their development of unusually large size. The biomass of bacteria varies over more than 10 orders of magnitude, from the 0.2 mum wide nanobacteria to the largest cells of the colorless sulfur bacteria...... and by actively creating an advective flow through the entire population. Diffusion limitation generally restricts the maximal size of prokaryotic cells and provides a selective advantage for mum-sized cells at the normally low substrate concentrations in the environment. The largest heterotrophic bacteria......, the 80 x 600 mum large Epulopiscium sp. from the gut of tropical fish, are presumably living in a very nutrient-rich medium. Many large bacteria contain numerous inclusions in the cells that reduce the volume of active cytoplasm. The most striking examples of competitive advantage from large cell size...

  13. Magnetic Bacteria.

    Science.gov (United States)

    Nelson, Jane Bray; Nelson, Jim

    1992-01-01

    Describes the history of Richard Blakemore's discovery of magnetotaxic organisms. Discusses possible reasons why the magnetic response in bacteria developed. Proposes research experiments integrating biology and physics in which students investigate problems using cultures of magnetotaxic organisms. (MDH)

  14. Experiments in a boundary layer subjected to free stream turbulence. Part 2: The role of TS waves in the transition process

    International Nuclear Information System (INIS)

    Boiko, A.V.; Westin, K.J.A.; Klingmann, B.G.B.; Kozlov, V.V.; Alfredsson, P.H.

    1993-12-01

    The natural occurrence of Tollmien-Schlichting (TS) waves has so far only been observed in boundary layers subjected to moderate levels of free stream turbulence (Tu <1%), due to the difficulty in detecting small-amplitude waves in highly perturbed boundary layers. By introducing controlled oscillations with a vibrating ribbon, it is possible to study small amplitude waves using phase-selective filtering techniques. In the present work, the effect of TS-waves on the transition is studied at Tu = 1.5%. It is demonstrated that TS-waves can exist and develop in a similar way as in an undisturbed boundary layer. It is also found that TS-waves with quite small amplitudes are involved in nonlinear interactions which lead to a regeneration of TS-waves in the whole unstable frequency band. This results in a significant increase in the number of turbulent spots, which promote the onset of turbulence. 28 refs

  15. Studies on inorganic ion-exchangers. Part I : application of polyantimonic acid for the polishing of uranium product of reprocessing stream

    International Nuclear Information System (INIS)

    Murthy, T.S.; Ananthakrishnan, M.; Mayan Kutty, P.C.; Mani, V.V.S.; Nadkarni, M.N.

    1977-01-01

    A systematic study has been initiated to investigate the feasibility of applying various inorganic exchangers to specific problems in nuclear fuel reprocessing industry and related spheres of activity. An investigation has been carried out to select a suitable exchanger for the polishing of tail-end uranium product of reprocessing stream free of residual plutonium activity. It includes determination of distribution ratios of uranium and plutonium on the exchangers like zirconium phosphate (ZrP), ammonium phosphomolybdate (AMP), ammonium phosphotungstate (APW), polyantimonic acid (PA), polyphosphoantimonic acid (PPA) and breakthrough capacities of plutonium on some of these exchangers. The inhibition studies of sodium on plutonium uptake on polyantimonic acid and the effective decontamination factors achieved using uranium tanker solution from the plant for recycling work have been described. These results indicated the usefulness of the polyantimonic acid exchanger for this purpose. (author)

  16. The Northeast Stream Quality Assessment

    Science.gov (United States)

    Van Metre, Peter C.; Riva-Murray, Karen; Coles, James F.

    2016-04-22

    In 2016, the U.S. Geological Survey (USGS) National Water-Quality Assessment (NAWQA) is assessing stream quality in the northeastern United States. The goal of the Northeast Stream Quality Assessment (NESQA) is to assess the quality of streams in the region by characterizing multiple water-quality factors that are stressors to aquatic life and evaluating the relation between these stressors and biological communities. The focus of NESQA in 2016 will be on the effects of urbanization and agriculture on stream quality in all or parts of eight states: Connecticut, Massachusetts, New Hampshire, New Jersey, New York, Pennsylvania, Rhode Island, and Vermont.Findings will provide the public and policymakers with information about the most critical factors affecting stream quality, thus providing insights about possible approaches to protect the health of streams in the region. The NESQA study will be the fourth regional study conducted as part of NAWQA and will be of similar design and scope to the first three, in the Midwest in 2013, the Southeast in 2014, and the Pacific Northwest in 2015 (http://txpub.usgs.gov/RSQA/).

  17. Immunomodulatory properties of probiotic bacteria

    DEFF Research Database (Denmark)

    Fink, Lisbeth Nielsen

    2007-01-01

    Certain lactic acid bacteria (LAB) are part of the commensal intestinal flora and considered beneficial for health, as they compete with pathogens for adhesion sites in the intestine and ferment otherwise indigestible compounds. Another important property of these so-called probiotic bacteria...... with bacteria, and the cytokine pattern induced by specific bacteria resembled the pattern induced in MoDC, except for TNF-alpha and IL-6, which were induced in response to different bacteria in blood DC/monocytes and monocyte-derived DC. Autologous NK cells produced IFN-gamma when cultured with blood DC......, monocytes and monocyte-derived DC and IL-12-inducing bacteria, whereas only DC induced IFN-gamma production in allogeneic T cells. In vitro-generated DC is a commonly used model of tissue DC, but they differ in certain aspects from intestinal DC, which are in direct contact with the intestinal microbiota...

  18. On a research of the jet stream power generation. Part 2. Maximum height of a flying kite; Jet kiryu hatsuden no kenkyu. 2. Tako no totatsu kodo ni tsuite

    Energy Technology Data Exchange (ETDEWEB)

    Miyashita, J. [Nihon University, Tokyo (Japan). College of Science and Technology

    1998-04-05

    Tethering cable was investigated as a part of a research of jet stream power generation using balloon and kite. Recently, there appeared new materials with light and high strength properties, such as carbon and polyamide resin. When these are used as tethering cables, flying ability of tethered bodies is remarkably improved. Tethered balloon at the altitude of 6500 feet and large-scale kite at the altitude of 5000 m are proposed for the idea of jet stream power generation. A computer program was developed for determining the flying ability of a kite, to calculate it. Similarity rule was also determined by the dimensional analysis. For a kite with a tethering cable having uniform diameter and specific gravity, the similarity can be obtained when two kinds of similarity rules are satisfied. One is (length of tethering cable/width of kite wing)times(dynamic pressure of air/tensile strength of cable){sup 1/2}=(constant). Another is (length of tethering cable)times(density of cable/tensile strength of cable)=(constant). Since the maximum height is in proportion to (strength/specific gravity) of the cable, it increases drastically using high performance materials. It is affected by the aerodynamic performance of the kite and the safety factor of strength of the cable. 4 refs., 45 figs., 2 tabs.

  19. [Antibacterial actin of vinegar against food-borne pathogenic bacteria including Escherichia coli O157:H7 (Part 2). Effect of sodium chloride and temperature on bactericidal activity].

    Science.gov (United States)

    Entani, E; Asai, M; Tsujihata, S; Tsukamoto, Y; Ohta, M

    1997-05-01

    Bactericidal effects of various kinds of AWASEZU (processed vinegar, 2.5% acidity) on food-borne pathogenic bacteria including Escherichia coli O157:H7 and other bacteria were examined. the order of bactericidal activities was NIHAIZU (3.5% NaCl was added) > SANBA-IZU (3.5% NaCl and 10% sucrose were added) > plain vinegar (spirit vinegar) > AMAZU (10% sucrose was added). This indicates that their activities were enhanced by the addition of sodium chloride and suppressed by the addition of sugar. On the other hand, when soy sauce was used instead of sodium chloride, the order of bactericidal activities was plain vinegar > AMAZU > NIHAIZU > SANBAIZU. This is mainly because their activities were suppressed by the increase in the pH value. The effect of sodium chloride (0.01-15%) and temperature (10-50 degrees C) on bactericidal activities against E. coli O157:H7 in spirit vinegar (0.5-2.5% acidity) was further examined. When vinegar was used in combination with sodium chloride, predominant synergism on the bactericidal activity was observed. Their activities were markedly enhanced by the addition of sodium chloride in proportion to the concentration. In addition to this, at higher temperatures spirit vinegar killed bacteria much more rapidly. It should be noted that the bactericidal activity of spirit vinegar was extremely enhanced by the combined use of the addition of sodium chloride and the rise of temperature. For example, in 2.5% acidity vinegar, the time required for 3 log decrease in viable cell numbers at 20 degrees C was shortened to 1/140-fold by the addition of 5% sodium chloride, shortened to 1/51-fold by the rise of the reaction temperature at 40 degrees C, and shortened to 1/830-fold; 0.89 minutes by both the addition of 5% sodium chloride and the rise of temperature at 40 degrees C. In order to propose the methods to prevent food poisoning by bacterial infection, bactericidal activities of vinegar solution containing sodium chloride on cooking tools and

  20. Turbomachine Sealing and Secondary Flows - Part 3. Part 3; Review of Power-Stream Support, Unsteady Flow Systems, Seal and Disk Cavity Flows, Engine Externals, and Life and Reliability Issues

    Science.gov (United States)

    Hendricks, R. C.; Steinetz, B. M.; Zaretsky, E. V.; Athavale, M. M.; Przekwas, A. J.

    2004-01-01

    The issues and components supporting the engine power stream are reviewed. It is essential that companies pay close attention to engine sealing issues, particularly on the high-pressure spool or high-pressure pumps. Small changes in these systems are reflected throughout the entire engine. Although cavity, platform, and tip sealing are complex and have a significant effect on component and engine performance, computational tools (e.g., NASA-developed INDSEAL, SCISEAL, and ADPAC) are available to help guide the designer and the experimenter. Gas turbine engine and rocket engine externals must all function efficiently with a high degree of reliability in order for the engine to run but often receive little attention until they malfunction. Within the open literature statistically significant data for critical engine components are virtually nonexistent; the classic approach is deterministic. Studies show that variations with loading can have a significant effect on component performance and life. Without validation data they are just studies. These variations and deficits in statistical databases require immediate attention.

  1. Motility of electric cable bacteria

    DEFF Research Database (Denmark)

    Bjerg, Jesper Tataru; Damgaard, Lars Riis; Holm, Simon Agner

    2016-01-01

    Cable bacteria are filamentous bacteria that electrically couple sulfide oxidation and oxygen reduction at centimeter distances, and observations in sediment environments have suggested that they are motile. By time-lapse microscopy, we found that cable bacteria used gliding motility on surfaces...... with a highly variable speed of 0.50.3 ms1 (meanstandard deviation) and time between reversals of 155108 s. They frequently moved forward in loops, and formation of twisted loops revealed helical rotation of the filaments. Cable bacteria responded to chemical gradients in their environment, and around the oxic......-anoxic interface, they curled and piled up, with straight parts connecting back to the source of sulfide. Thus, it appears that motility serves the cable bacteria in establishing and keeping optimal connections between their distant electron donor and acceptors in a dynamic sediment environment....

  2. Rumen bacteria

    International Nuclear Information System (INIS)

    McSweeney, C.S.; Denman, S.E.; Mackie, R.I.

    2005-01-01

    The rumen is the most extensively studied gut community and is characterized by its high population density, wide diversity and complexity of interactions. This complex, mixed microbial culture is comprised of prokaryote organisms including methane-producing archaebacteria, eukaryote organisms, such as ciliate and flagellate protozoa, anaerobic phycomycete fungi and bacteriophage. Bacteria are predominant (up to 10 11 viable cells per g comprising 200 species) but a variety of ciliate protozoa occur widely (10 4 -10 6 /g distributed over 25 genera). The anaerobic fungi are also widely distributed (zoospore population densities of 10 2 -10 4 /g distributed over 5 genera). The occurrence of bacteriophage is well documented (10 7 -10 9 particles/g). This section focuses primarily on the widely used methods for the cultivation and the enumeration of rumen microbes, especially bacteria, which grow under anaerobic conditions. Methods that can be used to measure hydrolytic enzymes (cellulases, xylanases, amylases and proteinases) are also described, along with cell harvesting and fractionation procedures. Brief reference is also made to fungi and protozoa, but detailed explanations for culturing and enumerating these microbes is presented in Chapters 2.4 and 2.5

  3. Response of resident bacteria in a tropical detergent effluent ...

    African Journals Online (AJOL)

    Bacteria were isolated from a tropical detergent-polluted stream, and their responses to linear alkylbenzene sulfonate (LAS) were investigated. The responses of the resident bacteria were assessed in terms of their ability or failure to grow in the presence of LAS and of their potential to degrade the surfactant. Eighteen ...

  4. Hydrogeology and water quality of the Pepacton Reservoir Watershed in southeastern New York. Part 4. Quantity and quality of ground-water and tributary contributions to stream base flow in selected main-valley reaches

    Science.gov (United States)

    Heisig, Paul M.

    2004-01-01

    Estimates of the quantity and quality of ground-water discharge from valley-fill deposits were calculated for nine valley reaches within the Pepacton watershed in southeastern New York in July and August of 2001. Streamflow and water quality at the upstream and downstream end of each reach and at intervening tributaries were measured under base-flow conditions and used in mass-balance equations to determine quantity and quality of ground-water discharge. These measurements and estimates define the relative magnitudes of upland (tributary inflow) and valley-fill (ground-water discharge) contributions to the main-valley streams and provide a basis for understanding the effects of hydrogeologic setting on these contributions. Estimates of the water-quality of ground-water discharge also provide an indication of the effects of road salt, manure, and human wastewater from villages on the water quality of streams that feed the Pepacton Reservoir. The most common contaminant in ground-water discharge was chloride from road salt; concentrations were less than 15 mg/L.Investigation of ground-water quality within a large watershed by measurement of stream base-flow quantity and quality followed by mass-balance calculations has benefits and drawbacks in comparison to direct ground-water sampling from wells. First, sampling streams is far less expensive than siting, installing, and sampling a watershed-wide network of wells. Second, base-flow samples represent composite samples of ground-water discharge from the most active part of the ground-water flow system across a drainage area, whereas a well network would only be representative of discrete points within local ground-water flow systems. Drawbacks to this method include limited reach selection because of unfavorable or unrepresentative hydrologic conditions, potential errors associated with a large number of streamflow and water-quality measurements, and limited ability to estimate concentrations of nonconservative

  5. Stream ciphers and number theory

    CERN Document Server

    Cusick, Thomas W; Renvall, Ari R

    2004-01-01

    This is the unique book on cross-fertilisations between stream ciphers and number theory. It systematically and comprehensively covers known connections between the two areas that are available only in research papers. Some parts of this book consist of new research results that are not available elsewhere. In addition to exercises, over thirty research problems are presented in this book. In this revised edition almost every chapter was updated, and some chapters were completely rewritten. It is useful as a textbook for a graduate course on the subject, as well as a reference book for researchers in related fields. · Unique book on interactions of stream ciphers and number theory. · Research monograph with many results not available elsewhere. · A revised edition with the most recent advances in this subject. · Over thirty research problems for stimulating interactions between the two areas. · Written by leading researchers in stream ciphers and number theory.

  6. StreamCat

    Data.gov (United States)

    U.S. Environmental Protection Agency — The StreamCat Dataset provides summaries of natural and anthropogenic landscape features for ~2.65 million streams, and their associated catchments, within the...

  7. Prioritized Contact Transport Stream

    Science.gov (United States)

    Hunt, Walter Lee, Jr. (Inventor)

    2015-01-01

    A detection process, contact recognition process, classification process, and identification process are applied to raw sensor data to produce an identified contact record set containing one or more identified contact records. A prioritization process is applied to the identified contact record set to assign a contact priority to each contact record in the identified contact record set. Data are removed from the contact records in the identified contact record set based on the contact priorities assigned to those contact records. A first contact stream is produced from the resulting contact records. The first contact stream is streamed in a contact transport stream. The contact transport stream may include and stream additional contact streams. The contact transport stream may be varied dynamically over time based on parameters such as available bandwidth, contact priority, presence/absence of contacts, system state, and configuration parameters.

  8. Productivity of Stream Definitions

    NARCIS (Netherlands)

    Endrullis, Jörg; Grabmayer, Clemens; Hendriks, Dimitri; Isihara, Ariya; Klop, Jan

    2007-01-01

    We give an algorithm for deciding productivity of a large and natural class of recursive stream definitions. A stream definition is called ‘productive’ if it can be evaluated continuously in such a way that a uniquely determined stream is obtained as the limit. Whereas productivity is undecidable

  9. Productivity of stream definitions

    NARCIS (Netherlands)

    Endrullis, J.; Grabmayer, C.A.; Hendriks, D.; Isihara, A.; Klop, J.W.

    2008-01-01

    We give an algorithm for deciding productivity of a large and natural class of recursive stream definitions. A stream definition is called ‘productive’ if it can be evaluated continually in such a way that a uniquely determined stream in constructor normal form is obtained as the limit. Whereas

  10. Quality of Streams in Johnson County, Kansas, and Relations to Environmental Variables, 2003-07

    Science.gov (United States)

    Rasmussen, Teresa J.; Poulton, Barry C.; Graham, Jennifer L.

    2009-01-01

    The quality of streams and relations to environmental variables in Johnson County, northeastern Kansas, were evaluated using water, streambed sediment, land use, streamflow, habitat, algal periphyton (benthic algae), and benthic macroinvertebrate data. Water, streambed sediment, and macroinvertebrate samples were collected in March 2007 during base flow at 20 stream sites that represent 11 different watersheds in the county. In addition, algal periphyton samples were collected twice (spring and summer 2007) at one-half of the sites. Environmental data including water and streambed-sediment chemistry data (primarily nutrients, fecal-indicator bacteria, and organic wastewater compounds), land use, streamflow, and habitat data were used in statistical analyses to evaluate relations between biological conditions and variables that may affect them. This report includes an evaluation of water and streambed-sediment chemistry, assessment of habitat conditions, comparison of biological community attributes (such as composition, diversity, and abundance) among sampling sites, placement of sampling sites into impairment categories, evaluation of biological data relative to environmental variables, and evaluation of changes in biological communities and effects of urbanization. This evaluation is useful for understanding factors that affect stream quality, for improving water-quality management programs, and for documenting changing conditions over time. The information will become increasingly important for protecting streams in the future as urbanization continues. Results of this study indicate that the biological quality at nearly all biological sampling sites in Johnson County has some level of impairment. Periphyton taxa generally were indicative of somewhat degraded conditions with small to moderate amounts of organic enrichment. Camp Branch in the Blue River watershed was the only site that met State criteria for full support of aquatic life in 2007. Since 2003

  11. PROXY-BASED PATCHING STREAM TRANSMISSION STRATEGY IN MOBILE STREAMING MEDIA SYSTEM

    Institute of Scientific and Technical Information of China (English)

    Liao Jianxin; Lei Zhengxiong; Ma Xutao; Zhu Xiaomin

    2006-01-01

    A mobile transmission strategy, PMPatching (Proxy-based Mobile Patching) transmission strategy is proposed, it applies to the proxy-based mobile streaming media system in Wideband Code Division Multiple Access (WCDMA) network. Performance of the whole system can be improved by using patching stream to transmit anterior part of the suffix that had been played back, and by batching all the demands for the suffix arrived in prefix period and patching stream transmission threshold period. Experimental results show that this strategy can efficiently reduce average network transmission cost and number of channels consumed in central streaming media server.

  12. Occurrence and sources of Escherichia coli in metropolitan St. Louis streams, October 2004 through September 2007

    Science.gov (United States)

    Wilkison, Donald H.; Davis, Jerri V.

    2010-01-01

    percentage of E. coli attributable to humans than other small basin sites; however, even though small basin E. coli densities typically were much larger than in large river receiving streams, small basins contributed, on average, only a small part (a maximum of 16 percent) of the total E. coli load to larger rivers. On average, approximately one-third of E. coli in metropolitan St. Louis streams was identified as originating from humans. Another one-third of the E. coli was determined to have originated from unidentified sources; dogs and geese contributed lesser amounts, 10 and 20 percent, of the total instream bacteria. Sources of E. coli were largely independent of hydrologic conditions-an indication that sources remained relatively consistent with time.

  13. Benthic invertebrate fauna, small streams

    Science.gov (United States)

    J. Bruce Wallace; S.L. Eggert

    2009-01-01

    Small streams (first- through third-order streams) make up >98% of the total number of stream segments and >86% of stream length in many drainage networks. Small streams occur over a wide array of climates, geology, and biomes, which influence temperature, hydrologic regimes, water chemistry, light, substrate, stream permanence, a basin's terrestrial plant...

  14. Neotropical Amphibian Declines Affect Stream Ecosystem Properties

    Science.gov (United States)

    Connelly, S.; Pringle, C. M.; Bixby, R. J.; Whiles, M. R.; Lips, K. R.; Brenes, R.; Colon-Gaud, J. C.; Kilham, S.; Hunte-Brown, M.

    2005-05-01

    Global declines of amphibians are well documented, yet effects of these dramatic losses on ecosystem structure and function are poorly understood. As part of a larger collaborative project, we compared two upland Panamanian streams. Both streams are biologically and geologically similar; however, one stream (Fortuna) has recently experienced almost complete extirpation of stream-dwelling frogs, while the other (Cope) still has intact populations. We experimentally excluded tadpoles from localized areas in each stream. We then compared chlorophyll a, algal community composition, ash-free dry mass (AFDM), inorganic matter, and insect assemblages in control and exclusion areas. Additionally, we sampled the natural substrate of both streams monthly for chlorophyll a, algal community composition, AFDM, and inorganic matter. At Cope, chlorophyll a, AFDM, and inorganic matter were greater in areas where tadpoles were excluded than in their presence. Numbers of dominant algal species (e.g., Nupela praecipua and Eunotia siolii) were greater in the exclusion versus control treatments. Monthly sampling of natural substrate indicated higher chlorophyll a and AFDM at Cope compared to Fortuna. Our data suggest that stream-dwelling anuran larvae have significant impacts on algal communities. These results also have implications for predicting the relevance of short-term experimental manipulations to long-term, whole-stream processes.

  15. Solar wind stream interfaces

    International Nuclear Information System (INIS)

    Gosling, J.T.; Asbridge, J.R.; Bame, S.J.; Feldman, W.C.

    1978-01-01

    Measurements aboard Imp 6, 7, and 8 reveal that approximately one third of all high-speed solar wind streams observed at 1 AU contain a sharp boundary (of thickness less than approx.4 x 10 4 km) near their leading edge, called a stream interface, which separates plasma of distinctly different properties and origins. Identified as discontinuities across which the density drops abruptly, the proton temperature increases abruptly, and the speed rises, stream interfaces are remarkably similar in character from one stream to the next. A superposed epoch analysis of plasma data has been performed for 23 discontinuous stream interfaces observed during the interval March 1971 through August 1974. Among the results of this analysis are the following: (1) a stream interface separates what was originally thick (i.e., dense) slow gas from what was originally thin (i.e., rare) fast gas; (2) the interface is the site of a discontinuous shear in the solar wind flow in a frame of reference corotating with the sun; (3) stream interfaces occur at speeds less than 450 km s - 1 and close to or at the maximum of the pressure ridge at the leading edges of high-speed streams; (4) a discontinuous rise by approx.40% in electron temperature occurs at the interface; and (5) discontinuous changes (usually rises) in alpha particle abundance and flow speed relative to the protons occur at the interface. Stream interfaces do not generally recur on successive solar rotations, even though the streams in which they are embedded often do. At distances beyond several astronomical units, stream interfaces should be bounded by forward-reverse shock pairs; three of four reverse shocks observed at 1 AU during 1971--1974 were preceded within approx.1 day by stream interfaces. Our observations suggest that many streams close to the sun are bounded on all sides by large radial velocity shears separating rapidly expanding plasma from more slowly expanding plasma

  16. Using Fluorescent Viruses for Detecting Bacteria in Water

    Science.gov (United States)

    Tabacco, Mary Beth; Qian, Xiaohua; Russo, Jaimie A.

    2009-01-01

    A method of detecting water-borne pathogenic bacteria is based partly on established molecular-recognition and fluorescent-labeling concepts, according to which bacteria of a species of interest are labeled with fluorescent reporter molecules and the bacteria can then be detected by fluorescence spectroscopy. The novelty of the present method lies in the use of bacteriophages (viruses that infect bacteria) to deliver the fluorescent reporter molecules to the bacteria of the species of interest.

  17. Effects of riparian buffer width on wood loading in headwater streams after repeated forest thinning

    Science.gov (United States)

    Julia I. Burton; Deanna H. Olson; Klaus J. Puettmann

    2016-01-01

    Forested riparian buffer zones are used in conjunction with upland forest management, in part, to provide for the recruitment for large wood to streams. Small headwater streams account for the majority of stream networks in many forested regions. Yet, our understanding of how riparian buffer width influences wood dynamics in headwater streams is relatively less...

  18. Inventory of miscellaneous streams

    International Nuclear Information System (INIS)

    Lueck, K.J.

    1995-09-01

    On December 23, 1991, the US Department of Energy, Richland Operations Office (RL) and the Washington State Department of Ecology (Ecology) agreed to adhere to the provisions of the Department of Ecology Consent Order. The Consent Order lists the regulatory milestones for liquid effluent streams at the Hanford Site to comply with the permitting requirements of Washington Administrative Code. The RL provided the US Congress a Plan and Schedule to discontinue disposal of contaminated liquid effluent into the soil column on the Hanford Site. The plan and schedule document contained a strategy for the implementation of alternative treatment and disposal systems. This strategy included prioritizing the streams into two phases. The Phase 1 streams were considered to be higher priority than the Phase 2 streams. The actions recommended for the Phase 1 and 2 streams in the two reports were incorporated in the Hanford Federal Facility Agreement and Consent Order. Miscellaneous Streams are those liquid effluents streams identified within the Consent Order that are discharged to the ground but are not categorized as Phase 1 or Phase 2 Streams. This document consists of an inventory of the liquid effluent streams being discharged into the Hanford soil column

  19. Hydrography - Streams and Shorelines

    Data.gov (United States)

    California Natural Resource Agency — The hydrography layer consists of flowing waters (rivers and streams), standing waters (lakes and ponds), and wetlands -- both natural and manmade. Two separate...

  20. Biodegradation testing of solidified low-level waste streams

    International Nuclear Information System (INIS)

    Piciulo, P.L.; Shea, C.E.; Barletta, R.E.

    1985-05-01

    The NRC Technical Position on Waste Form (TP) specifies that waste should be resistant to biodegradation. The methods recommended in the TP for testing resistance to fungi, ASTM G21, and for testing resistance to bacteria, ASTM G22, were carried out on several types of solidified simulated wastes, and the effect of microbial activity on the mechanical strength of the materials tested was examined. The tests are believed to be sufficient for distinguishing between materials that are susceptible to biodegradation and those that are not. It is concluded that failure of these tests should not be regarded of itself as an indication that the waste form will biodegrade to an extent that the form does not meet the stability requirements of 10 CFR Part 61. In the case of failure of ASTM G21 or ASTM G22 or both, it is recommended that additional data be supplied by the waste generator to demonstrate the resistance of the waste form to microbial degradation. To produce a data base on the applicability of the biodegradation tests, the following simulated laboratory-scale waste forms were prepared and tested: boric acid and sodium sulfate evaporator bottoms, mixed-bed bead resins and powdered resins each solidified in asphalt, cement, and vinyl ester-styrene. Cement solidified wastes supported neither fungal nor bacterial growth. Of the asphalt solidified wastes, only the forms of boric acid evaporator bottoms did not support fungal growth. Bacteria grew on all of the asphalt solidified wastes. Cleaning the surface of these waste forms did not affect bacterial growth and had a limited effect on the fungal growth. Only vinyl esterstyrene solidified sodium sulfate evaporator bottoms showed viable fungi cultures, but surface cleaning with solvents eliminated fungal growth in subsequent testing. Some forms of all the waste streams solidified in vinyl ester-styrene showed viable bacteria cultures. 13 refs., 12 tabs

  1. Water quality and ecological condition of urban streams in Independence, Missouri, June 2005 through December 2008

    Science.gov (United States)

    Christensen, D.; Harris, Thomas E.; Niesen, Shelley L.

    2010-01-01

    To identify the sources of selected constituents in urban streams and better understand processes affecting water quality and their effects on the ecological condition of urban streams and the Little Blue River in Independence, Missouri the U.S. Geological Survey in cooperation with the City of Independence Water Pollution Control Department initiated a study in June 2005 to characterize water quality and evaluate the ecological condition of streams within Independence. Base-flow and stormflow samples collected from five sites within Independence, from June 2005 to December 2008, were used to characterize the physical, chemical, and biologic effects of storm runoff on the water quality in Independence streams and the Little Blue River. The streams draining Independence-Rock Creek, Sugar Creek, Mill Creek, Fire Prairie Creek, and the Little Blue River-drain to the north and the Missouri River. Two small predominantly urban streams, Crackerneck Creek [12.9-square kilometer (km2) basin] and Spring Branch Creek (25.4-km2 basin), were monitored that enter into the Little Blue River between upstream and downstream monitoring sites. The Little Blue River above the upstream site is regulated by several reservoirs, but streamflow is largely uncontrolled. The Little Blue River Basin encompasses 585 km2 with about 168 km2 or 29 percent of the basin lying within the city limits of Independence. Water-quality samples also were collected for Rock Creek (24.1-km2 basin) that drains the western part of Independence. Data collection included streamflow, physical properties, dissolved oxygen, chloride, metals, nutrients, common organic micro-constituents, and fecal indicator bacteria. Benthic macroinvertebrate community surveys and habitat assessments were conducted to establish a baseline for evaluating the ecological condition and health of streams within Independence. Additional dry-weather screenings during base flow of all streams draining Independence were conducted to

  2. Stream Processing Using Grammars and Regular Expressions

    DEFF Research Database (Denmark)

    Rasmussen, Ulrik Terp

    disambiguation. The first algorithm operates in two passes in a semi-streaming fashion, using a constant amount of working memory and an auxiliary tape storage which is written in the first pass and consumed by the second. The second algorithm is a single-pass and optimally streaming algorithm which outputs...... as much of the parse tree as is semantically possible based on the input prefix read so far, and resorts to buffering as many symbols as is required to resolve the next choice. Optimality is obtained by performing a PSPACE-complete pre-analysis on the regular expression. In the second part we present...... Kleenex, a language for expressing high-performance streaming string processing programs as regular grammars with embedded semantic actions, and its compilation to streaming string transducers with worst-case linear-time performance. Its underlying theory is based on transducer decomposition into oracle...

  3. Percent Forest Adjacent to Streams

    Data.gov (United States)

    U.S. Environmental Protection Agency — The type of vegetation along a stream influences the water quality in the stream. Intact buffer strips of natural vegetation along streams tend to intercept...

  4. Percent Agriculture Adjacent to Streams

    Data.gov (United States)

    U.S. Environmental Protection Agency — The type of vegetation along a stream influences the water quality in the stream. Intact buffer strips of natural vegetation along streams tend to intercept...

  5. Benthic algae of benchmark streams in agricultural areas of eastern Wisconsin

    Science.gov (United States)

    Scudder, Barbara C.; Stewart, Jana S.

    2001-01-01

    Benthic algae were collected from 20 streams in the Western Lake Michigan Drainages by the U.S. Geological Survey in May and June of 1993 as part of the National Water-Quality Assessment program. These streams were selected to represent "benchmark" streams that were minimally affected by human activities, especially agriculture, for comparison to other streams in similar environmental settings. Streams were chosen from four relatively homogeneous units (RHU's) in agricultural areas with differing texture of surficial deposits and bedrock type.

  6. Animal models for auditory streaming

    Science.gov (United States)

    Itatani, Naoya

    2017-01-01

    Sounds in the natural environment need to be assigned to acoustic sources to evaluate complex auditory scenes. Separating sources will affect the analysis of auditory features of sounds. As the benefits of assigning sounds to specific sources accrue to all species communicating acoustically, the ability for auditory scene analysis is widespread among different animals. Animal studies allow for a deeper insight into the neuronal mechanisms underlying auditory scene analysis. Here, we will review the paradigms applied in the study of auditory scene analysis and streaming of sequential sounds in animal models. We will compare the psychophysical results from the animal studies to the evidence obtained in human psychophysics of auditory streaming, i.e. in a task commonly used for measuring the capability for auditory scene analysis. Furthermore, the neuronal correlates of auditory streaming will be reviewed in different animal models and the observations of the neurons’ response measures will be related to perception. The across-species comparison will reveal whether similar demands in the analysis of acoustic scenes have resulted in similar perceptual and neuronal processing mechanisms in the wide range of species being capable of auditory scene analysis. This article is part of the themed issue ‘Auditory and visual scene analysis’. PMID:28044022

  7. Wadeable Streams Assessment Data

    Science.gov (United States)

    The Wadeable Streams Assessment (WSA) is a first-ever statistically-valid survey of the biological condition of small streams throughout the U.S. The U.S. Environmental Protection Agency (EPA) worked with the states to conduct the assessment in 2004-2005. Data for each parameter sampled in the Wadeable Streams Assessment (WSA) are available for downloading in a series of files as comma separated values (*.csv). Each *.csv data file has a companion text file (*.txt) that lists a dataset label and individual descriptions for each variable. Users should view the *.txt files first to help guide their understanding and use of the data.

  8. Are Urban Stream Restoration Plans Worth Implementing?

    Science.gov (United States)

    Sarvilinna, Auri; Lehtoranta, Virpi; Hjerppe, Turo

    2017-01-01

    To manage and conserve ecosystems in a more sustainable way, it is important to identify the importance of the ecosystem services they provide and understand the connection between natural and socio-economic systems. Historically, streams have been an underrated part of the urban environment. Many of them have been straightened and often channelized under pressure of urbanization. However, little knowledge exists concerning the economic value of stream restoration or the value of the improved ecosystem services. We used the contingent valuation method to assess the social acceptability of a policy-level water management plan in the city of Helsinki, Finland, and the values placed on improvements in a set of ecosystem services, accounting for preference uncertainty. According to our study, the action plan would provide high returns on restoration investments, since the benefit-cost ratio was 15-37. Moreover, seventy-two percent of the respondents willing to pay for stream restoration chose "I want to conserve streams as a part of urban nature for future generations" as the most motivating reason. Our study indicates that the water management plan for urban streams in Helsinki has strong public support. If better marketed to the population within the watershed, the future projects could be partly funded by the local residents, making the projects easier to accomplish. The results of this study can be used in planning, management and decision making related to small urban watercourses.

  9. Bleach vs. Bacteria

    Science.gov (United States)

    ... Articles | Inside Life Science Home Page Bleach vs. Bacteria By Sharon Reynolds Posted April 2, 2014 Your ... hypochlorous acid to help kill invading microbes, including bacteria. Researchers funded by the National Institutes of Health ...

  10. Bacteria and lignin degradation

    Institute of Scientific and Technical Information of China (English)

    Jing LI; Hongli YUAN; Jinshui YANG

    2009-01-01

    Lignin is both the most abundant aromatic (phenolic) polymer and the second most abundant raw material.It is degraded and modified by bacteria in the natural world,and bacteria seem to play a leading role in decomposing lignin in aquatic ecosystems.Lignin-degrading bacteria approach the polymer by mechanisms such as tunneling,erosion,and cavitation.With the advantages of immense environmental adaptability and biochemical versatility,bacteria deserve to be studied for their ligninolytic potential.

  11. Future Roads Near Streams

    Data.gov (United States)

    U.S. Environmental Protection Agency — Roads are a source of auto related pollutants (e.g. gasoline, oil and other engine fluids). When roads are near streams, rain can wash these pollutants directly into...

  12. Channelized Streams in Iowa

    Data.gov (United States)

    Iowa State University GIS Support and Research Facility — This draft dataset consists of all ditches or channelized pieces of stream that could be identified using three input datasets; namely the1:24,000 National...

  13. Stochastic ice stream dynamics.

    Science.gov (United States)

    Mantelli, Elisa; Bertagni, Matteo Bernard; Ridolfi, Luca

    2016-08-09

    Ice streams are narrow corridors of fast-flowing ice that constitute the arterial drainage network of ice sheets. Therefore, changes in ice stream flow are key to understanding paleoclimate, sea level changes, and rapid disintegration of ice sheets during deglaciation. The dynamics of ice flow are tightly coupled to the climate system through atmospheric temperature and snow recharge, which are known exhibit stochastic variability. Here we focus on the interplay between stochastic climate forcing and ice stream temporal dynamics. Our work demonstrates that realistic climate fluctuations are able to (i) induce the coexistence of dynamic behaviors that would be incompatible in a purely deterministic system and (ii) drive ice stream flow away from the regime expected in a steady climate. We conclude that environmental noise appears to be crucial to interpreting the past behavior of ice sheets, as well as to predicting their future evolution.

  14. Roads Near Streams

    Data.gov (United States)

    U.S. Environmental Protection Agency — Roads are a source of auto related pollutants (e.g. gasoline, oil and other engine fluids). When roads are near streams, rain can wash these pollutants directly into...

  15. Streaming tearing mode

    Science.gov (United States)

    Shigeta, M.; Sato, T.; Dasgupta, B.

    1985-01-01

    The magnetohydrodynamic stability of streaming tearing mode is investigated numerically. A bulk plasma flow parallel to the antiparallel magnetic field lines and localized in the neutral sheet excites a streaming tearing mode more strongly than the usual tearing mode, particularly for the wavelength of the order of the neutral sheet width (or smaller), which is stable for the usual tearing mode. Interestingly, examination of the eigenfunctions of the velocity perturbation and the magnetic field perturbation indicates that the streaming tearing mode carries more energy in terms of the kinetic energy rather than the magnetic energy. This suggests that the streaming tearing mode instability can be a more feasible mechanism of plasma acceleration than the usual tearing mode instability.

  16. DNR 24K Streams

    Data.gov (United States)

    Minnesota Department of Natural Resources — 1:24,000 scale streams captured from USGS seven and one-half minute quadrangle maps, with perennial vs. intermittent classification, and connectivity through lakes,...

  17. Trout Stream Special Regulations

    Data.gov (United States)

    Minnesota Department of Natural Resources — This layer shows Minnesota trout streams that have a special regulation as described in the 2006 Minnesota Fishing Regulations. Road crossings were determined using...

  18. Scientific stream pollution analysis

    National Research Council Canada - National Science Library

    Nemerow, Nelson Leonard

    1974-01-01

    A comprehensive description of the analysis of water pollution that presents a careful balance of the biological,hydrological, chemical and mathematical concepts involved in the evaluation of stream...

  19. Collaborative Media Streaming

    OpenAIRE

    Kahmann, Verena

    2008-01-01

    Mit Hilfe der IP-Technologie erbrachte Multimedia-Dienste wie IPTV oder Video-on-Demand sind zur Zeit ein gefragtes Thema. Technisch werden solche Dienste unter dem Begriff "Streaming" eingeordnet. Ein Server sendet Mediendaten kontinuierlich an Empfänger, welche die Daten sofort weiterverarbeiten und anzeigen. Über einen Rückkanal hat der Kunde die Möglichkeit der Einflussnahme auf die Wiedergabe. Eine Weiterentwicklung dieser Streaming-Dienste ist die Möglichkeit, gemeinsam mit anderen dens...

  20. Streaming Pool: reuse, combine and create reactive streams with pleasure

    CERN Multimedia

    CERN. Geneva

    2017-01-01

    When connecting together heterogeneous and complex systems, it is not easy to exchange data between components. Streams of data are successfully used in industry in order to overcome this problem, especially in the case of "live" data. Streams are a specialization of the Observer design pattern and they provide asynchronous and non-blocking data flow. The ongoing effort of the ReactiveX initiative is one example that demonstrates how demanding this technology is even for big companies. Bridging the discrepancies of different technologies with common interfaces is already done by the Reactive Streams initiative and, in the JVM world, via reactive-streams-jvm interfaces. Streaming Pool is a framework for providing and discovering reactive streams. Through the mechanism of dependency injection provided by the Spring Framework, Streaming Pool provides a so called Discovery Service. This object can discover and chain streams of data that are technologically agnostic, through the use of Stream IDs. The stream to ...

  1. Stream-aquifer relations and the potentiometric surface of the Upper Floridan aquifer in the lower Apalachicola-Chattahoochee-Flint River basin in parts of Georgia, Florida, and Alabama, 1999-2000

    Science.gov (United States)

    Mosner, Melinda S.

    2002-01-01

    The Upper Floridan aquifer is the principal source of water for domestic and agricultural use in the lower Apalachicola-Chattahoochee-Flint (ACF) River Basin. Recent drought and increased water use have made understanding surface- and ground-water relations a priority for water-resource managers in the region. From July 1999 through August 2000, less than normal precipitation reduced streamflow in the area to less than 12 percent of average mean-daily streamflow and ground-water levels reached record or near-record lows. Effects of drought on stream-aquifer interactions in the basin were evaluated using baseflow estimation, ground-water seepage calculations, and potentiometric-surface maps. Ground-water discharge to streams, or baseflow, was estimated using three methods: field measurements, hydrograph separation, and linear regression analysis. Results were evaluated seasonally -- October 1999, April 2000, and August 2000 -- and for the period of record at four surface-water stations located on Kinchafoonee, Spring, Muckalee, and Turkey Creeks. Estimates of baseflow also were compared annually; ground-water discharge during the drought years, 1999 - 2000, was compared with ground-water discharge during a relatively wet year, 1994. Hydrograph separation indicated decreased base-flow of streams as the water level in the Upper Floridan aquifer declined. Mean-annual baseflow for Kinchafoonee, Spring, Muckalee, and Turkey Creeks ranged from 36 to 71 percent of total streamflow during the period of record. In 1994 baseflow accounted for only 37 to 56 percent of total streamflow, in 1999 baseflow comprised from 60 to 73 percent of total streamflow, and in 2000 baseflow comprised from 56 to 76 percent of streamflow. The percentage of total streamflow attributed to ground water increased during the drought, whereas other components of streamflow decreased (overland flow, interflow, and channel precipitation). Even though relative ground-water contributions were increased

  2. Streams and their future inhabitants

    DEFF Research Database (Denmark)

    Sand-Jensen, K.; Friberg, Nikolai

    2006-01-01

    In this fi nal chapter we look ahead and address four questions: How do we improve stream management? What are the likely developments in the biological quality of streams? In which areas is knowledge on stream ecology insuffi cient? What can streams offer children of today and adults of tomorrow?...

  3. High prevalence of antibiotic resistance among bacteria isolated ...

    African Journals Online (AJOL)

    Mid-stream urine was collected and subjected to rapid dipstick and urine culture media. Antibacterial susceptibility tests were conducted against the bacteria. Risk factors for AUTI and demographic data were obtained using pretested questionnaire. Data were analyzed using SPSS Vs. 20 software package. Results: Of the ...

  4. Processing ruminal ingesta to release bacteria attached to feed ...

    African Journals Online (AJOL)

    A comparison was made of different methods of processing ingesta to release bacteria attached to solid particles, prior to making viable counts. Initially processing was performed under a stream of anaerobic gas and counts were made using the roll tube technique. Later, processing was done in an anaerobic cabinet and ...

  5. Multi-scale streambed topographic and discharge effects on hyporheic at the stream network scale in confined streams

    Science.gov (United States)

    Alessandra Marzadri; Daniele Tonina; James A. McKean; Matthew G. Tiedemann; Rohan M. Benjankar

    2014-01-01

    The hyporheic zone is the volume of the streambed sediment mostly saturated with stream water. It is the transitional zone between stream and shallow-ground waters and an important ecotone for benthic species, including macro-invertebrates, microorganisms, and some fish species that dwell in the hyporheic zone for parts of their lives. Most hyporheic analyses are...

  6. Acoustofluidics 13: Analysis of acoustic streaming by perturbation methods.

    Science.gov (United States)

    Sadhal, S S

    2012-07-07

    In this Part 13 of the tutorial series "Acoustofluidics--exploiting ultrasonic standing waves forces and acoustic streaming in microfluidic systems for cell and particle manipulation," the streaming phenomenon is presented from an analytical standpoint, and perturbation methods are developed for analyzing such flows. Acoustic streaming is the phenomenon that takes place when a steady flow field is generated by the absorption of an oscillatory field. This can happen either by attenuation (quartz wind) or by interaction with a boundary. The latter type of streaming can also be generated by an oscillating solid in an otherwise still fluid medium or vibrating enclosure of a fluid body. While we address the first kind of streaming, our focus is largely on the second kind from a practical standpoint for application to microfluidic systems. In this Focus article, we limit the analysis to one- and two-dimensional problems in order to understand the analytical techniques with examples that most-easily illustrate the streaming phenomenon.

  7. Alignment data stream for the ATLAS inner detector

    International Nuclear Information System (INIS)

    Pinto, B

    2010-01-01

    The ATLAS experiment uses a complex trigger strategy to be able to achieve the necessary Event Filter rate output, making possible to optimize the storage and processing needs of these data. These needs are described in the ATLAS Computing Model, which embraces Grid concepts. The output coming from the Event Filter will consist of three main streams: a primary stream, the express stream and the calibration stream. The calibration stream will be transferred to the Tier-0 facilities which will allow the prompt reconstruction of this stream with an admissible latency of 8 hours, producing calibration constants of sufficient quality to permit a first-pass processing. An independent calibration stream is developed and tested, which selects tracks at the level-2 trigger (LVL2) after the reconstruction. The stream is composed of raw data, in byte-stream format, and contains only information of the relevant parts of the detector, in particular the hit information of the selected tracks. This leads to a significantly improved bandwidth usage and storage capability. The stream will be used to derive and update the calibration and alignment constants if necessary every 24h. Processing is done using specialized algorithms running in Athena framework in dedicated Tier-0 resources, and the alignment constants will be stored and distributed using the COOL conditions database infrastructure. The work is addressing in particular the alignment requirements, the needs for track and hit selection, timing and bandwidth issues.

  8. Genomics of Probiotic Bacteria

    Science.gov (United States)

    O'Flaherty, Sarah; Goh, Yong Jun; Klaenhammer, Todd R.

    Probiotic bacteria from the Lactobacillus and Bifidobacterium species belong to the Firmicutes and the Actinobacteria phylum, respectively. Lactobacilli are members of the lactic acid bacteria (LAB) group, a broadly defined family of microorganisms that ferment various hexoses into primarily lactic acid. Lactobacilli are typically low G + C gram-positive species which are phylogenetically diverse, with over 100 species documented to date. Bifidobacteria are heterofermentative, high G + C content bacteria with about 30 species of bifidobacteria described to date.

  9. THE ORBIT OF THE ORPHAN STREAM

    International Nuclear Information System (INIS)

    Newberg, Heidi Jo; Willett, Benjamin A.; Yanny, Brian; Xu Yan

    2010-01-01

    halo masses. Distinguishing between different classes of models requires data over a larger range of distances. The Orphan Stream is projected to extend to 90 kpc from the Galactic center, and measurements of these distant parts of the stream would be a powerful probe of the mass of the Milky Way.

  10. Lower Red River Meadow Stream Restoration Project

    International Nuclear Information System (INIS)

    1996-05-01

    As part of a continuing effort to restore anadromous fish populations in the South Fork Clearwater River basin of Idaho, Bonneville Power Administration (BPA) proposes to fund the Lower Red River Meadow Restoration Project (Project). The Project is a cooperative effort with the Idaho Soil and Water Conservation District, Nez Perce National Forest, Idaho Department of Fish and Game (IDFG), and the Nez Perce Tribe of Idaho. The proposed action would allow the sponsors to perform stream bank stabilization, aquatic and riparian habitat improvement activities on IDFG's Red River Management Area and to secure long-term conservation contracts or agreements for conducting streambank and habitat improvement activities with participating private landowners located in the Idaho County, Idaho, study area. This preliminary Environmental Assessment (EA) examines the potential environmental effects of stabilizing the stream channel, restoring juvenile fish rearing habitat and reestablishing a riparian shrub community along the stream

  11. Genetics of Lactic Acid Bacteria

    Science.gov (United States)

    Zagorec, Monique; Anba-Mondoloni, Jamila; Coq, Anne-Marie Crutz-Le; Champomier-Vergès, Marie-Christine

    Many meat (or fish) products, obtained by the fermentation of meat originating from various animals by the flora that naturally contaminates it, are part of the human diet since millenaries. Historically, the use of bacteria as starters for the fermentation of meat, to produce dry sausages, was thus performed empirically through the endogenous micro-biota, then, by a volunteer addition of starters, often performed by back-slopping, without knowing precisely the microbial species involved. It is only since about 50 years that well defined bacterial cultures have been used as starters for the fermentation of dry sausages. Nowadays, the indigenous micro-biota of fermented meat products is well identified, and the literature is rich of reports on the identification of lactic acid bacteria (LAB) present in many traditional fermented products from various geographical origin, obtained without the addition of commercial starters (See Talon, Leroy, & Lebert, 2007, and references therein).

  12. Removing sulphur oxides from a fluid stream

    Science.gov (United States)

    Katz, Torsten; Riemann, Christian; Bartling, Karsten; Rigby, Sean Taylor; Coleman, Luke James Ivor; Lail, Marty Alan

    2014-04-08

    A process for removing sulphur oxides from a fluid stream, such as flue gas, comprising: providing a non-aqueous absorption liquid containing at least one hydrophobic amine, the liquid being incompletely miscible with water; treating the fluid stream in an absorption zone with the non-aqueous absorption liquid to transfer at least part of the sulphur oxides into the non-aqueous absorption liquid and to form a sulphur oxide-hydrophobic amine-complex; causing the non-aqueous absorption liquid to be in liquid-liquid contact with an aqueous liquid whereby at least part of the sulphur oxide-hydrophobic amine-complex is hydrolyzed to release the hydrophobic amine and sulphurous hydrolysis products, and at least part of the sulphurous hydrolysis products is transferred into the aqueous liquid; separating the aqueous liquid from the non-aqueous absorption liquid. The process mitigates absorbent degradation problems caused by sulphur dioxide and oxygen in flue gas.

  13. The Rabbit Stream Cipher

    DEFF Research Database (Denmark)

    Boesgaard, Martin; Vesterager, Mette; Zenner, Erik

    2008-01-01

    The stream cipher Rabbit was first presented at FSE 2003, and no attacks against it have been published until now. With a measured encryption/decryption speed of 3.7 clock cycles per byte on a Pentium III processor, Rabbit does also provide very high performance. This paper gives a concise...... description of the Rabbit design and some of the cryptanalytic results available....

  14. Music Streaming in Denmark

    DEFF Research Database (Denmark)

    Pedersen, Rasmus Rex

    This report analyses how a ’per user’ settlement model differs from the ‘pro rata’ model currently used. The analysis is based on data for all streams by WiMP users in Denmark during August 2013. The analysis has been conducted in collaboration with Christian Schlelein from Koda on the basis of d...

  15. Academic streaming in Europe

    DEFF Research Database (Denmark)

    Falaschi, Alessandro; Mønster, Dan; Doležal, Ivan

    2004-01-01

    The TF-NETCAST task force was active from March 2003 to March 2004, and during this time the mem- bers worked on various aspects of streaming media related to the ultimate goal of setting up common services and infrastructures to enable netcasting of high quality content to the academic community...

  16. Streaming potential near a rotating porous disk.

    Science.gov (United States)

    Prieve, Dennis C; Sides, Paul J

    2014-09-23

    Theory and experimental results for the streaming potential measured in the vicinity of a rotating porous disk-shaped sample are described. Rotation of the sample on its axis draws liquid into its face and casts it from the periphery. Advection within the sample engenders streaming current and streaming potential that are proportional to the zeta potential and the disk's major dimensions. When Darcy's law applies, the streaming potential is proportional to the square of the rotation at low rate but becomes invariant with rotation at high rate. The streaming potential is invariant with the sample's permeability at low rate and is proportional to the inverse square of the permeability at high rate. These predictions were tested by determining the zeta potential and permeability of the loop side of Velcro, a sample otherwise difficult to characterize; reasonable values of -56 mV for zeta and 8.7 × 10(-9) m(2) for the permeability were obtained. This approach offers the ability to determine both the zeta potential and the permeability of materials having open structures. Compressing them into a porous plug is unnecessary. As part of the development of the theory, a convenient formula for a flow-weighted volume-averaged space-charge density of the porous medium, -εζ/k, was obtained, where ε is the permittivity, ζ is the zeta potential, and k is the Darcy permeability. The formula is correct when Smoluchowski's equation and Darcy's law are both valid.

  17. Heavy-water extraction from non-electrolytic hydrogen streams

    International Nuclear Information System (INIS)

    LeRoy, R.L.; Hammerli, M.; Butler, J.P.

    1981-01-01

    Heavy water may be produced from non-electrolytic hydrogen streams using a combined electrolysis and catalytic exchange process. The method comprises contacting feed water in a catalyst column with hydrogen gas originating partly from a non-electrolytic hydrogen stream and partly from an electrolytic hydrogen stream, so as to enrich the feed water with the deuterium extracted from both the non-electrolytic and electrolytic hydrogen gas, and passing the deuterium water to an electrolyser wherein the electrolytic hydrogen gas is generated and then fed through the catalyst column. (L.L.)

  18. Mapping a lateralisation gradient within the ventral stream for auditory speech perception

    OpenAIRE

    Karsten eSpecht

    2013-01-01

    Recent models on speech perception propose a dual stream processing network, with a dorsal stream, extending from the posterior temporal lobe of the left hemisphere through inferior parietal areas into the left inferior frontal gyrus, and a ventral stream that is assumed to originate in the primary auditory cortex in the upper posterior part of the temporal lobe and to extend towards the anterior part of the temporal lobe, where it may connect to the ventral part of the inferior frontal gyrus...

  19. Mapping a lateralization gradient within the ventral stream for auditory speech perception

    OpenAIRE

    Specht, Karsten

    2013-01-01

    Recent models on speech perception propose a dual-stream processing network, with a dorsal stream, extending from the posterior temporal lobe of the left hemisphere through inferior parietal areas into the left inferior frontal gyrus, and a ventral stream that is assumed to originate in the primary auditory cortex in the upper posterior part of the temporal lobe and to extend toward the anterior part of the temporal lobe, where it may connect to the ventral part of the inferior frontal gyrus....

  20. Effects of Concrete Channels on Stream Biogeochemistry, Maryland Coastal Plain

    Science.gov (United States)

    Prestegaard, K. L.; Gilbert, L.; Phemister, K.

    2005-05-01

    In the 1950's and 60's, extensive networks of cement-lined channels were built in suburban watersheds near Washington, D.C. to convey storm water to downstream locations. These cement-lined stream channels limit interactions between surface and groundwater and they provide sources of alkalinity in Maryland Coastal Plain watersheds that normally have low alkalinity. This project was designed to 1) compare base flow water chemistry in headwater reaches of urban and non-urban streams, and 2) to evaluate downstream changes in water chemistry in channelized urban streams in comparison with non-urban reference streams. During a drought year, headwater streams in both urban and non-urban sites had significant concentrations of Fe(II) that were discharged from groundwater sources and rapidly oxidized by iron-oxidizing bacteria. During a wet year, the concentrations of Fe(II) were higher in headwater urban streams than in the non-urban streams. This suggests that impervious surfaces in headwater urban watersheds prevent the recharge of oxygen-rich waters during storm events, which maintains iron-rich groundwater discharge to the stream. Downstream changes in water chemistry are prominent in cement-lined urban channels because they are associated with distinctive microbial communities. The headwater zones of channelized streams are dominated by iron-ozidizing bacteria, that are replaced downstream by manganese-oxidizing zones, and replaced further downstream by biofilms dominated by photosynthesizing cyanobacteria. The reaches dominated by cyanobacteria exhibit diurnal changes in pH due to uptake of CO2 for photosynthesis. Diurnal changes range from 7.5 to 8.8 in the summer months to 7.0 to 7.5 in the cooler months, indicating both the impact of photosynthesis and the additional source of alkalinity provided by concrete. The dissolved oxygen, pH, and other characteristics of tributaries dominated by cyanobacteria are similar to the water chemistry characteristics observed in

  1. How honey kills bacteria

    NARCIS (Netherlands)

    Kwakman, Paulus H. S.; te Velde, Anje A.; de Boer, Leonie; Speijer, Dave; Vandenbroucke-Grauls, Christina M. J. E.; Zaat, Sebastian A. J.

    2010-01-01

    With the rise in prevalence of antibiotic-resistant bacteria, honey is increasingly valued for its antibacterial activity. To characterize all bactericidal factors in a medical-grade honey, we used a novel approach of successive neutralization of individual honey bactericidal factors. All bacteria

  2. Geomorphic and Vegetative Recovery Processes Along Modified Stream Channels of West Tennessee

    National Research Council Canada - National Science Library

    Simon, Andrew; Hupp, Cliff R

    1992-01-01

    .... After all or parts of a stream are straightened, dredged, or cleared, systematic hydrologic, geomorphic, and ecologic processes collectively begin to reduce energy conditions towards the premodified state...

  3. Analysis of hydraulic characteristics for stream diversion in small stream

    Energy Technology Data Exchange (ETDEWEB)

    Ahn, Sang-Jin; Jun, Kye-Won [Chungbuk National University, Cheongju(Korea)

    2001-10-31

    This study is the analysis of hydraulic characteristics for stream diversion reach by numerical model test. Through it we can provide the basis data in flood, and in grasping stream flow characteristics. Analysis of hydraulic characteristics in Seoknam stream were implemented by using computer model HEC-RAS(one-dimensional model) and RMA2(two-dimensional finite element model). As a result we became to know that RMA2 to simulate left, main channel, right in stream is more effective method in analysing flow in channel bends, steep slope, complex bed form effect stream flow characteristics, than HEC-RAS. (author). 13 refs., 3 tabs., 5 figs.

  4. Association of bacteria with marine invertebrates: Implications for ballast water management

    Digital Repository Service at National Institute of Oceanography (India)

    Khandeparker, L.; Anil, A.C.

    stream_size 36739 stream_content_type text/plain stream_name EcoHealth_10_268a.pdf.txt stream_source_info EcoHealth_10_268a.pdf.txt Content-Encoding UTF-8 Content-Type text/plain; charset=UTF-8 1 Author version: EcoHealth... transportation, can have direct impact on society and human health. Ship’s ballast tanks hold different non-indigenous vertebrates, invertebrates, plants, microscopic algae, bacteria etc. (Williams et al. 1988; Carlton and Geller 1993; Smith et al. 1996...

  5. Acoustic streaming in microchannels

    DEFF Research Database (Denmark)

    Tribler, Peter Muller

    focusing of E. coli bacteria and 0.6 µm particles is achieved. These particles are considerably smaller than the critical particle size of approximately 2 µm for the usual half-wavelength resonance in a rectangular channel. The fifth study presents a quantitative comparison of analytical, numerical...

  6. Fate of acetone in an outdoor model stream in southern Mississippi, U.S.A.

    Science.gov (United States)

    Rathbun, R.E.; Stephens, D.W.; Shultz, D.J.; Tai, D.Y.

    1988-01-01

    The fate of acetone in water was investigated in an outdoor model stream located in southern Mississippi, U.S.A. Acetone was injected continuously for 32 days resulting in small milligram-perliter concentrations in the stream. Rhodamine-WT dye was injected at the beginning and at the end of the study to determine the time-of-travel and dispersion characteristics of the stream. A 12-h injection of t-butyl alcohol (TBA) was used to determine the volatilization characteristics of the stream. Volatilization controlled the acetone concentration in the stream. Significant bacterial degradation of acetone did not occur, contrary to expectations based on previous laboratory studies. Attempts to induce degradation of the acetone by injecting glucose and a nutrient solution containing bacteria acclimated to acetone were unsuccessful. Possible explanations for the lack of bacterial degradation included a nitrate limitation and a limited residence time in the stream system. ?? 1988.

  7. Making Stone Soup: Evaluating a Recall-Oriented Multi-Stream Question Answering Stream for Dutch

    NARCIS (Netherlands)

    Ahn, D.D.; Jijkoun, V.; Müller, K.E.; de Rijke, M.; Schlobach, K.S.; Mishne, G.A.; Peters, C.; Clough, P.D.; Jones, G.J.F.; Gonzalo, J.; Kluck, M.; Magnini, B.

    2005-01-01

    We describe the participation of the University of Amsterdam in the Question Answering track at CLEF 2004.We took part in the monolingual Dutch task and, for the first time, also in the bilingual English to Dutch task. This year¿s system is a further elaboration and refinement of the multi-stream

  8. Streaming gravity mode instability

    International Nuclear Information System (INIS)

    Wang Shui.

    1989-05-01

    In this paper, we study the stability of a current sheet with a sheared flow in a gravitational field which is perpendicular to the magnetic field and plasma flow. This mixing mode caused by a combined role of the sheared flow and gravity is named the streaming gravity mode instability. The conditions of this mode instability are discussed for an ideal four-layer model in the incompressible limit. (author). 5 refs

  9. Autonomous Byte Stream Randomizer

    Science.gov (United States)

    Paloulian, George K.; Woo, Simon S.; Chow, Edward T.

    2013-01-01

    Net-centric networking environments are often faced with limited resources and must utilize bandwidth as efficiently as possible. In networking environments that span wide areas, the data transmission has to be efficient without any redundant or exuberant metadata. The Autonomous Byte Stream Randomizer software provides an extra level of security on top of existing data encryption methods. Randomizing the data s byte stream adds an extra layer to existing data protection methods, thus making it harder for an attacker to decrypt protected data. Based on a generated crypto-graphically secure random seed, a random sequence of numbers is used to intelligently and efficiently swap the organization of bytes in data using the unbiased and memory-efficient in-place Fisher-Yates shuffle method. Swapping bytes and reorganizing the crucial structure of the byte data renders the data file unreadable and leaves the data in a deconstructed state. This deconstruction adds an extra level of security requiring the byte stream to be reconstructed with the random seed in order to be readable. Once the data byte stream has been randomized, the software enables the data to be distributed to N nodes in an environment. Each piece of the data in randomized and distributed form is a separate entity unreadable on its own right, but when combined with all N pieces, is able to be reconstructed back to one. Reconstruction requires possession of the key used for randomizing the bytes, leading to the generation of the same cryptographically secure random sequence of numbers used to randomize the data. This software is a cornerstone capability possessing the ability to generate the same cryptographically secure sequence on different machines and time intervals, thus allowing this software to be used more heavily in net-centric environments where data transfer bandwidth is limited.

  10. The LHCb Turbo stream

    Energy Technology Data Exchange (ETDEWEB)

    Puig, A., E-mail: albert.puig@cern.ch

    2016-07-11

    The LHCb experiment will record an unprecedented dataset of beauty and charm hadron decays during Run II of the LHC, set to take place between 2015 and 2018. A key computing challenge is to store and process this data, which limits the maximum output rate of the LHCb trigger. So far, LHCb has written out a few kHz of events containing the full raw sub-detector data, which are passed through a full offline event reconstruction before being considered for physics analysis. Charm physics in particular is limited by trigger output rate constraints. A new streaming strategy includes the possibility to perform the physics analysis with candidates reconstructed in the trigger, thus bypassing the offline reconstruction. In the Turbo stream the trigger will write out a compact summary of physics objects containing all information necessary for analyses. This will allow an increased output rate and thus higher average efficiencies and smaller selection biases. This idea will be commissioned and developed during 2015 with a selection of physics analyses. It is anticipated that the turbo stream will be adopted by an increasing number of analyses during the remainder of LHC Run II (2015–2018) and ultimately in Run III (starting in 2020) with the upgraded LHCb detector.

  11. Stream biofilm responses to flow intermittency: from cells to ecosystems

    OpenAIRE

    Sergi eSabater; Sergi eSabater; Xisca eTimoner; Carles eBorrego; Carles eBorrego; Vicenç eAcuña

    2016-01-01

    Temporary streams are characterized by the alternation of dry and wet hydrological phases, creating both a harsh environment for the biota as well as a high diversity of opportunities for adaptation. These systems are eminently microbial-based during several of these hydrological phases, and those growing on all solid substrata (biofilms) accordingly change their physical structure and community composition. Biofilms experience large decreases on cell densities and biomass, both of bacteria a...

  12. Stream Biofilm Responses to Flow Intermittency: From Cells to Ecosystems

    OpenAIRE

    Sabater, Sergi; Timoner, Xisca; Borrego, Carles; Acuña, Vicenç

    2016-01-01

    Temporary streams are characterized by the alternation of dry and wet hydrological phases, creating both a harsh environment for the biota as well as a high diversity of opportunities for adaptation. These systems are mainly microbial-based during several of these hydrological phases, and those growing on all solid substrata (biofilms) accordingly change their physical structure and community composition. Biofilms experience large decreases in cell densities and biomass, both of bacteria and ...

  13. Antibiotics from predatory bacteria

    Directory of Open Access Journals (Sweden)

    Juliane Korp

    2016-03-01

    Full Text Available Bacteria, which prey on other microorganisms, are commonly found in the environment. While some of these organisms act as solitary hunters, others band together in large consortia before they attack their prey. Anecdotal reports suggest that bacteria practicing such a wolfpack strategy utilize antibiotics as predatory weapons. Consistent with this hypothesis, genome sequencing revealed that these micropredators possess impressive capacities for natural product biosynthesis. Here, we will present the results from recent chemical investigations of this bacterial group, compare the biosynthetic potential with that of non-predatory bacteria and discuss the link between predation and secondary metabolism.

  14. Temperature and current data collected as part of the CLIvar MOde Water Dynamic Experiment (CLIMODE) mooring data from 2005-11 to 2007-11 in the North Atlantic, south-east of the Gulf Stream (NCEI Accession 0127259)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Two years of temperature, salinity, current, and nutrient data were collected on four subsurface moorings as part of a two-year field component of the CLIMODE...

  15. Re-Meandering of Lowland Streams

    DEFF Research Database (Denmark)

    Pedersen, Morten Lauge; Kristensen, Klaus Kevin; Friberg, Nikolai

    2014-01-01

    We evaluated the restoration of physical habitats and its influence on macroinvertebrate community structure in 18 Danish lowland streams comprising six restored streams, six streams with little physical alteration and six channelized streams. We hypothesized that physical habitats and macroinver...

  16. Stream processing health card application.

    Science.gov (United States)

    Polat, Seda; Gündem, Taflan Imre

    2012-10-01

    In this paper, we propose a data stream management system embedded to a smart card for handling and storing user specific summaries of streaming data coming from medical sensor measurements and/or other medical measurements. The data stream management system that we propose for a health card can handle the stream data rates of commonly known medical devices and sensors. It incorporates a type of context awareness feature that acts according to user specific information. The proposed system is cheap and provides security for private data by enhancing the capabilities of smart health cards. The stream data management system is tested on a real smart card using both synthetic and real data.

  17. Observations of the Magellanic Stream between declinations -200 and 00

    International Nuclear Information System (INIS)

    Cohen, R.J.

    1982-01-01

    The region of the Magellanic Stream between RA 23sup(h) 00sup(m) and 00sup(h) 20sup(m) and Dec - 20 0 and 0 0 (1950) has been mapped in the 21-cm line of neutral hydrogen using the Jodrell Bank Mk II telescope (beamwidth 31 x 34 arcmin 2 ). The detection level of the measurements is 0.1 K. The Stream is much more extensive in this part of the sky than hitherto realized, and has a very complex filamentary structure. All the filaments follow a regular velocity pattern. In addition to the known gradient of velocity along the Stream there is a gradient transverse to the Stream. In this and other respects the Stream is very similar to tidal bridges and tails seen in the nearby M81 group of galaxies. (author)

  18. Stream biofilm responses to flow intermittency: from cells to ecosystems

    Directory of Open Access Journals (Sweden)

    Sergi eSabater

    2016-03-01

    Full Text Available Temporary streams are characterized by the alternation of dry and wet hydrological phases, creating both a harsh environment for the biota as well as a high diversity of opportunities for adaptation. These systems are eminently microbial-based during several of these hydrological phases, and those growing on all solid substrata (biofilms accordingly change their physical structure and community composition. Biofilms experience large decreases on cell densities and biomass, both of bacteria and algae, during dryness. Algal and bacterial communities show remarkable decreases in their diversity, at least locally (at the habitat scale. Biofilms also respond with significant physiological plasticity to each of the hydrological changes. The decreasing humidity of the substrata through the drying process, and the changing quantity and quality of organic matter and nutrients available in the stream during that process, causes unequal responses on the biofilm bacteria and algae. Biofilm algae are affected faster than bacteria by the hydric stress, and as a result the ecosystem respiration resists longer than gross primary production to the increasing duration of flow intermittency. This response implies enhancing ecosystem heterotrophy, a pattern that can be exacerbated in temporary streams suffering of longer dry periods under global change.

  19. Extracellular communication in bacteria

    DEFF Research Database (Denmark)

    Chhabra, S.R.; Philipp, B.; Eberl, L.

    2005-01-01

    molecules, in different Gram-positive and Gram-negative bacteria they control pathogenicity, secondary metabolite production, biofilm differentiation, DNA transfer and bioluminescence. The development of biosensors for the detection of these signal molecules has greatly facilitated their subsequent chemical...

  20. Do Bacteria Age?

    Indian Academy of Sciences (India)

    Bacteria are thought to be examples of organisms that do not age. They divide by .... carry genetic material to the next generation through the process of reproduction; they are also .... molecules, and modified proteins. This report revealed that ...

  1. Social Behaviour in Bacteria

    Indian Academy of Sciences (India)

    Administrator

    the recipient. • Social behaviours can be categorized according to the fitness ... is actually the flagella of symbiotic spirochete bacteria that helps it to swim around .... Normal population. Responsive switching. (Environmental stress). Stochastic.

  2. [Darwin and bacteria].

    Science.gov (United States)

    Ledermann D, Walter

    2009-02-01

    As in 2009 the scientific world celebrates two hundreds years from the birthday of Charles Darwin and one hundred and fifty from the publication of The Origin of Species, an analysis of his complete work is performed, looking for any mention of bacteria. But it seems that the great naturahst never took knowledge about its existence, something rather improbable in a time when the discovery of bacteria shook the medical world, or he deliberately ignored them, not finding a place for such microscopic beings into his theory of evolution. But the bacteria badly affected his familiar life, killing scarlet fever one of his children and worsening to death the evolution of tuberculosis of his favourite Annie. Darwin himself could suffer the sickness of Chagas, whose etiological agent has a similar level to bacteria in the scale of evolution.

  3. Predicting fecal indicator organism contamination in Oregon coastal streams

    International Nuclear Information System (INIS)

    Pettus, Paul; Foster, Eugene; Pan, Yangdong

    2015-01-01

    In this study, we used publicly available GIS layers and statistical tree-based modeling (CART and Random Forest) to predict pathogen indicator counts at a regional scale using 88 spatially explicit landscape predictors and 6657 samples from non-estuarine streams in the Oregon Coast Range. A total of 532 frequently sampled sites were parsed down to 93 pathogen sampling sites to control for spatial and temporal biases. This model's 56.5% explanation of variance, was comparable to other regional models, while still including a large number of variables. Analysis showed the most important predictors on bacteria counts to be: forest and natural riparian zones, cattle related activities, and urban land uses. This research confirmed linkages to anthropogenic activities, with the research prediction mapping showing increased bacteria counts in agricultural and urban land use areas and lower counts with more natural riparian conditions. - Highlights: • We modeled fecal indicator pathogens in Oregon Coast range streams. • We used machine learning tools with only publicly available data. • These models demonstrate the importance of riparian land use on water quality. • Regional water quality was characterized in streams with little to no monitoring. - A desktop approach to predict stream pathogens from exclusively publicly available data sets on a regional scale.

  4. Lipopolysaccharides in diazotrophic bacteria

    OpenAIRE

    Serrato, Rodrigo V.

    2014-01-01

    Biological nitrogen fixation (BNF) is a process in which the atmospheric nitrogen (N2) is transformed into ammonia (NH3) by a select group of nitrogen-fixing organisms, or diazotrophic bacteria. In order to furnish the biologically useful nitrogen to plants, these bacteria must be in constant molecular communication with their host plants. Some of these molecular plant-microbe interactions are very specific, resulting in a symbiotic relationship between the diazotroph and the host. Others are...

  5. Lipopolysaccharides in diazotrophic bacteria.

    Science.gov (United States)

    Serrato, Rodrigo V

    2014-01-01

    Biological nitrogen fixation (BNF) is a process in which the atmospheric nitrogen (N2) is transformed into ammonia (NH3) by a select group of nitrogen-fixing organisms, or diazotrophic bacteria. In order to furnish the biologically useful nitrogen to plants, these bacteria must be in constant molecular communication with their host plants. Some of these molecular plant-microbe interactions are very specific, resulting in a symbiotic relationship between the diazotroph and the host. Others are found between associative diazotrophs and plants, resulting in plant infection and colonization of internal tissues. Independent of the type of ecological interaction, glycans, and glycoconjugates produced by these bacteria play an important role in the molecular communication prior and during colonization. Even though exopolysaccharides (EPS) and lipochitooligosaccharides (LCO) produced by diazotrophic bacteria and released onto the environment have their importance in the microbe-plant interaction, it is the lipopolysaccharides (LPS), anchored on the external membrane of these bacteria, that mediates the direct contact of the diazotroph with the host cells. These molecules are extremely variable among the several species of nitrogen fixing-bacteria, and there are evidences of the mechanisms of infection being closely related to their structure.

  6. Regional Comparison of Nitrogen Export to Japanese Forest Streams

    Directory of Open Access Journals (Sweden)

    Hideaki Shibata

    2001-01-01

    Full Text Available Nitrogen (N emissions in Asian countries are predicted to increase over the next several decades. An understanding of the mechanisms that control temporal and spatial fluctuation of N export to forest streams is important not only to quantify critical loads of N, N saturation status, and soil acidification N dynamics and budgets in Japanese forested watersheds is not clear due to the lack of regional comparative studies on stream N chemistry. To address the lack of comparative studies, we measured inorganic N (nitrate and ammonium concentrations from June 2000 to May 2001 in streams in 18 experimental forests located throughout the Japanese archipelago and belonging to the Japanese Union of University Forests. N concentrations in stream water during base flow and high flow periods were monitored, and N mineralization potential in soil was measured using batch incubation experiments. Higher nitrate concentrations in stream water were present in central Japan, an area that receives high rates of atmospheric N deposition. In northern Japan, snowmelt resulted in increased nitrate concentrations in stream water. The potential net N mineralization rate was higher in surface soil than in subsurface soil, and the high potential for N mineralization in the surface soil partly contributed to the increase in nitrate concentration in stream water during a storm event. Regional differences in the atmospheric N deposition and seasonality of precipitation and high discharge are principal controls on the concentrations and variations of nitrates in stream water in forested watersheds of Japan.

  7. Baseline Glass Development for Combined Fission Products Waste Streams

    International Nuclear Information System (INIS)

    Crum, Jarrod V.; Billings, Amanda Y.; Lang, Jesse B.; Marra, James C.; Rodriguez, Carmen P.; Ryan, Joseph V.; Vienna, John D.

    2009-01-01

    Borosilicate glass was selected as the baseline technology for immobilization of the Cs/Sr/Ba/Rb (Cs), lanthanide (Ln) and transition metal fission product (TM) waste steams as part of a cost benefit analysis study.(1) Vitrification of the combined waste streams have several advantages, minimization of the number of waste forms, a proven technology, and similarity to waste forms currently accepted for repository disposal. A joint study was undertaken by Pacific Northwest National Laboratory (PNNL) and Savannah River National Laboratory (SRNL) to develop acceptable glasses for the combined Cs + Ln + TM waste streams (Option 1) and Cs + Ln combined waste streams (Option 2) generated by the AFCI UREX+ set of processes. This study is aimed to develop baseline glasses for both combined waste stream options and identify key waste components and their impact on waste loading. The elemental compositions of the four-corners study were used along with the available separations data to determine the effect of burnup, decay, and separations variability on estimated waste stream compositions.(2-5) Two different components/scenarios were identified that could limit waste loading of the combined Cs + LN + TM waste streams, where as the combined Cs + LN waste stream has no single component that is perceived to limit waste loading. Combined Cs + LN waste stream in a glass waste form will most likely be limited by heat due to the high activity of Cs and Sr isotopes.

  8. Nitrogen saturation in stream ecosystems.

    Science.gov (United States)

    Earl, Stevan R; Valett, H Maurice; Webster, Jackson R

    2006-12-01

    The concept of nitrogen (N) saturation has organized the assessment of N loading in terrestrial ecosystems. Here we extend the concept to lotic ecosystems by coupling Michaelis-Menten kinetics and nutrient spiraling. We propose a series of saturation response types, which may be used to characterize the proximity of streams to N saturation. We conducted a series of short-term N releases using a tracer (15NO3-N) to measure uptake. Experiments were conducted in streams spanning a gradient of background N concentration. Uptake increased in four of six streams as NO3-N was incrementally elevated, indicating that these streams were not saturated. Uptake generally corresponded to Michaelis-Menten kinetics but deviated from the model in two streams where some other growth-critical factor may have been limiting. Proximity to saturation was correlated to background N concentration but was better predicted by the ratio of dissolved inorganic N (DIN) to soluble reactive phosphorus (SRP), suggesting phosphorus limitation in several high-N streams. Uptake velocity, a reflection of uptake efficiency, declined nonlinearly with increasing N amendment in all streams. At the same time, uptake velocity was highest in the low-N streams. Our conceptual model of N transport, uptake, and uptake efficiency suggests that, while streams may be active sites of N uptake on the landscape, N saturation contributes to nonlinear changes in stream N dynamics that correspond to decreased uptake efficiency.

  9. Linear Alkylbenzene Sulfonate tolerance in bacteria isolated from sediment of tropical water bodies polluted with detergents

    Directory of Open Access Journals (Sweden)

    I.T Kehinde

    2008-12-01

    Full Text Available The discharge of untreated detergent-bearing waste introduces linear alkylbenzene sulfonates (LAS to the aquatic environment. The surfactant persists in some streams and rivers in Nigeria, some is adsorbed to suspended materials and end in the sediment of the receiving water bodies. In this study, bacteria isolated from sediments of some tropical detergent-effluent-polluted streams were tested for tolerance to LAS using the media dilution technique. LAS-tolerance was indicated by growth of the bacteria in the presence of the surfactant. The pH, concentrations of surfactant, population of heterotrophic bacteria and population of LAS-tolerant bacteria in the sediments were determined. A direct relationship (r= 0.9124 was found between the alkaline conditions (pH= 8.2-12.0 and high surfactant concentrations (45-132 mg/g in the sediment. The sediments harboured a high population and a wide variety of bacteria; the populations of viable heterotrophic bacteria (vHB: 2.9×10(5 to 1.2×10(7 cfu/g and LAS tolerant bacteria (LTB: 1.5×10(4 to 1.2×10(6 cfu/g had a direct relationship (r= 0.9500. An inverse relationship resulted between each of them and the concentration of surfactant in the sediment, r vHB/ LAS = -0.9303 and rLTB/ LAS = -0.9143, respectively. Twelve bacteria species were isolated from the sediment: Alcaligenes odorans, Bacillus subtilis, Burkholderia cepacia, Citrobacter freundii, Citrobacter diversus, Escherichia coli, Micrococcus luteus, Micrococcus albus, Pseudomonas putida, Pseudomonas stutzeri, Staphylococcus aureus and Streptococcus faecalis. Most of them were adapted to the surfactant with their maximum acceptable concentrations ranging between 0.03 and >1.0% (w/v. The sediments could serve as source of adapted organisms which can be used in bio-treatment of LAS-bearing waste. Rev. Biol. Trop. 56 (4:7-15. Epub 2008 December 12.La descarga de desechos que contienen detergentes liberan sulfonatos de alquibenceno lineal (LAS al

  10. Galaxies with jet streams

    International Nuclear Information System (INIS)

    Breuer, R.

    1981-01-01

    Describes recent research work on supersonic gas flow. Notable examples have been observed in cosmic radio sources, where jet streams of galactic dimensions sometimes occur, apparently as the result of interaction between neighbouring galaxies. The current theory of jet behaviour has been convincingly demonstrated using computer simulation. The surprisingly long-term stability is related to the supersonic velocity, and is analagous to the way in which an Appollo spacecraft re-entering the atmosphere supersonically is protected by the gas from the burning shield. (G.F.F.)

  11. Oscillating acoustic streaming jet

    International Nuclear Information System (INIS)

    Moudjed, Brahim; Botton, Valery; Henry, Daniel; Millet, Severine; Ben Hadid, Hamda; Garandet, Jean-Paul

    2014-01-01

    The present paper provides the first experimental investigation of an oscillating acoustic streaming jet. The observations are performed in the far field of a 2 MHz circular plane ultrasound transducer introduced in a rectangular cavity filled with water. Measurements are made by Particle Image Velocimetry (PIV) in horizontal and vertical planes near the end of the cavity. Oscillations of the jet appear in this zone, for a sufficiently high Reynolds number, as an intermittent phenomenon on an otherwise straight jet fluctuating in intensity. The observed perturbation pattern is similar to that of former theoretical studies. This intermittently oscillatory behavior is the first step to the transition to turbulence. (authors)

  12. The metaphors we stream by: Making sense of music streaming

    OpenAIRE

    Hagen, Anja Nylund

    2016-01-01

    In Norway music-streaming services have become mainstream in everyday music listening. This paper examines how 12 heavy streaming users make sense of their experiences with Spotify and WiMP Music (now Tidal). The analysis relies on a mixed-method qualitative study, combining music-diary self-reports, online observation of streaming accounts, Facebook and last.fm scrobble-logs, and in-depth interviews. By drawing on existing metaphors of Internet experiences we demonstrate that music-streaming...

  13. The fecal bacteria

    Science.gov (United States)

    Sadowsky, Michael J.; Whitman, Richard L.

    2011-01-01

    The Fecal Bacteria offers a balanced, integrated discussion of fecal bacteria and their presence and ecology in the intestinal tract of mammals, in the environment, and in the food supply. This volume covers their use in examining and assessing water quality in order to offer protection from illnesses related to swimming in or ingesting contaminated water, in addition to discussing their use in engineering considerations of water quality, modeling, monitoring, and regulations. Fecal bacteria are additionally used as indicators of contamination of ready-to-eat foods and fresh produce. The intestinal environment, the microbial community structure of the gut microbiota, and the physiology and genomics of this broad group of microorganisms are explored in the book. With contributions from an internationally recognized group of experts, the book integrates medicine, public health, environmental, and microbiological topics in order to provide a unique, holistic understanding of fecal bacteria. Moreover, it shows how the latest basic science and applied research findings are helping to solve problems and develop effective management strategies. For example, readers will discover how the latest tools and molecular approaches have led to our current understanding of fecal bacteria and enabled us to improve human health and water quality. The Fecal Bacteria is recommended for microbiologists, clinicians, animal scientists, engineers, environmental scientists, food safety experts, water quality managers, and students. It will help them better understand fecal bacteria and use their knowledge to protect human and environmental health. They can also apply many of the techniques and molecular tools discussed in this book to the study of a broad range of microorganisms in a variety of habitats.

  14. Tracking Gendered Streams

    Directory of Open Access Journals (Sweden)

    Maria Eriksson

    2017-10-01

    Full Text Available One of the most prominent features of digital music services is the provision of personalized music recommendations that come about through the profiling of users and audiences. Based on a range of "bot experiments," this article investigates if, and how, gendered patterns in music recommendations are provided by the streaming service Spotify. While our experiments did not give any strong indications that Spotify assigns different taste profiles to male and female users, the study showed that male artists were highly overrepresented in Spotify's music recommendations; an issue which we argue prompts users to cite hegemonic masculine norms within the music industries. Although the results should be approached as historically and contextually contingent, we argue that they point to how gender and gendered tastes may be constituted through the interplay between users and algorithmic knowledge-making processes, and how digital content delivery may maintain and challenge gender relations and gendered power differentials within the music industries. Seen through the lens of critical research on software, music and gender performativity, the experiments thus provide insights into how gender is shaped and attributed meaning as it materializes in contemporary music streams.

  15. The LHCb Turbo stream

    CERN Document Server

    AUTHOR|(CDS)2070171

    2016-01-01

    The LHCb experiment will record an unprecedented dataset of beauty and charm hadron decays during Run II of the LHC, set to take place between 2015 and 2018. A key computing challenge is to store and process this data, which limits the maximum output rate of the LHCb trigger. So far, LHCb has written out a few kHz of events containing the full raw sub-detector data, which are passed through a full offline event reconstruction before being considered for physics analysis. Charm physics in particular is limited by trigger output rate constraints. A new streaming strategy includes the possibility to perform the physics analysis with candidates reconstructed in the trigger, thus bypassing the offline reconstruction. In the Turbo stream the trigger will write out a compact summary of physics objects containing all information necessary for analyses. This will allow an increased output rate and thus higher average efficiencies and smaller selection biases. This idea will be commissioned and developed during 2015 wi...

  16. Anti-fungal properties of chitinolytic dune soil bacteria

    NARCIS (Netherlands)

    De Boer, W.; Klein Gunnewiek, P.J.A.; Lafeber, P.; Janse, J.H.; Spit, B.E.; Woldendorp, J.W.

    1998-01-01

    Anti-fungal properties of chitinolytic soil bacteria may enable them to compete successfully for chitin with fungi. Additionally, the production of chitinase may be part of a lytic system that enables the bacteria to use living hyphae rather than chitin as the actual growth substrate, since chitin

  17. Stream Lifetimes Against Planetary Encounters

    Science.gov (United States)

    Valsecchi, G. B.; Lega, E.; Froeschle, Cl.

    2011-01-01

    We study, both analytically and numerically, the perturbation induced by an encounter with a planet on a meteoroid stream. Our analytical tool is the extension of pik s theory of close encounters, that we apply to streams described by geocentric variables. The resulting formulae are used to compute the rate at which a stream is dispersed by planetary encounters into the sporadic background. We have verified the accuracy of the analytical model using a numerical test.

  18. Morphology of a Wetland Stream

    Science.gov (United States)

    Jurmu; Andrle

    1997-11-01

    / Little attention has been paid to wetland stream morphology in the geomorphological and environmental literature, and in the recently expanding wetland reconstruction field, stream design has been based primarily on stream morphologies typical of nonwetland alluvial environments. Field investigation of a wetland reach of Roaring Brook, Stafford, Connecticut, USA, revealed several significant differences between the morphology of this stream and the typical morphology of nonwetland alluvial streams. Six morphological features of the study reach were examined: bankfull flow, meanders, pools and riffles, thalweg location, straight reaches, and cross-sectional shape. It was found that bankfull flow definitions originating from streams in nonwetland environments did not apply. Unusual features observed in the wetland reach include tight bends and a large axial wavelength to width ratio. A lengthy straight reach exists that exceeds what is typically found in nonwetland alluvial streams. The lack of convex bank point bars in the bends, a greater channel width at riffle locations, an unusual thalweg location, and small form ratios (a deep and narrow channel) were also differences identified. Further study is needed on wetland streams of various regions to determine if differences in morphology between alluvial and wetland environments can be applied in order to improve future designs of wetland channels.KEY WORDS: Stream morphology; Wetland restoration; Wetland creation; Bankfull; Pools and riffles; Meanders; Thalweg

  19. Application of SELECT and SWAT models to simulate source load, fate, and transport of fecal bacteria in watersheds.

    Science.gov (United States)

    Ranatunga, T.

    2017-12-01

    Modeling of fate and transport of fecal bacteria in a watershed is a processed based approach that considers releases from manure, point sources, and septic systems. Overland transport with water and sediments, infiltration into soils, transport in the vadose zone and groundwater, die-off and growth processes, and in-stream transport are considered as the other major processes in bacteria simulation. This presentation will discuss a simulation of fecal indicator bacteria source loading and in-stream conditions of a non-tidal watershed (Cedar Bayou Watershed) in South Central Texas using two models; Spatially Explicit Load Enrichment Calculation Tool (SELECT) and Soil and Water Assessment Tool (SWAT). Furthermore, it will discuss a probable approach of bacteria source load reduction in order to meet the water quality standards in the streams. The selected watershed is listed as having levels of fecal indicator bacteria that posed a risk for contact recreation and wading by the Texas Commission of Environmental Quality (TCEQ). The SELECT modeling approach was used in estimating the bacteria source loading from land categories. Major bacteria sources considered were, failing septic systems, discharges from wastewater treatment facilities, excreta from livestock (Cattle, Horses, Sheep and Goat), excreta from Wildlife (Feral Hogs, and Deer), Pet waste (mainly from Dogs), and runoff from urban surfaces. The estimated source loads from SELECT model were input to the SWAT model, and simulate the bacteria transport through the land and in-stream. The calibrated SWAT model was then used to estimate the indicator bacteria in-stream concentrations for future years based on regional land use, population and household forecast (up to 2040). Based on the reductions required to meet the water quality standards in-stream, the corresponding required source load reductions were estimated.

  20. Mycorrhiza helper bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Deveau, Aurelie [French National Insitute for Agricultural Research (INRA); Labbe, Jessy [ORNL

    2016-10-01

    This chapter focuses on the Mycorrhiza Helper Bacteria (MHB), a generic name given to bacteria which stimulate the formation of mycorrhizal symbiosis. By extension, some bacterial strains that positively impact the functioning of mycorrhizal symbiosis are also called MHB. These bacteria have applicative interests, as they indirectly improve the health and growth of tree seedlings. MHB are not restricted to a specific type of ecosystem, but are rather generalist in the way that they associate with both herbaceous and woody mycorrhizal plants from boreal, temperate, arid and tropical ecosystems. However, understanding the molecular mechanisms and their specificities will help us to know more about the ecology of the MHB. The process of acquisition varies between fungal species; while ectomycorrhizal fungi most probably recurrently acquire them from the environment, the association between bacterial endosymbionts and Glomeromycota probably dates back to very ancient times, and has since been vertically transmitted.

  1. Analyzing indicators of stream health for Minnesota streams

    Science.gov (United States)

    Singh, U.; Kocian, M.; Wilson, B.; Bolton, A.; Nieber, J.; Vondracek, B.; Perry, J.; Magner, J.

    2005-01-01

    Recent research has emphasized the importance of using physical, chemical, and biological indicators of stream health for diagnosing impaired watersheds and their receiving water bodies. A multidisciplinary team at the University of Minnesota is carrying out research to develop a stream classification system for Total Maximum Daily Load (TMDL) assessment. Funding for this research is provided by the United States Environmental Protection Agency and the Minnesota Pollution Control Agency. One objective of the research study involves investigating the relationships between indicators of stream health and localized stream characteristics. Measured data from Minnesota streams collected by various government and non-government agencies and research institutions have been obtained for the research study. Innovative Geographic Information Systems tools developed by the Environmental Science Research Institute and the University of Texas are being utilized to combine and organize the data. Simple linear relationships between index of biological integrity (IBI) and channel slope, two-year stream flow, and drainage area are presented for the Redwood River and the Snake River Basins. Results suggest that more rigorous techniques are needed to successfully capture trends in IBI scores. Additional analyses will be done using multiple regression, principal component analysis, and clustering techniques. Uncovering key independent variables and understanding how they fit together to influence stream health are critical in the development of a stream classification for TMDL assessment.

  2. ADAPTIVE STREAMING OVER HTTP (DASH UNTUK APLIKASI VIDEO STREAMING

    Directory of Open Access Journals (Sweden)

    I Made Oka Widyantara

    2015-12-01

    Full Text Available This paper aims to analyze Internet-based streaming video service in the communication media with variable bit rates. The proposed scheme on Dynamic Adaptive Streaming over HTTP (DASH using the internet network that adapts to the protocol Hyper Text Transfer Protocol (HTTP. DASH technology allows a video in the video segmentation into several packages that will distreamingkan. DASH initial stage is to compress the video source to lower the bit rate video codec uses H.26. Video compressed further in the segmentation using MP4Box generates streaming packets with the specified duration. These packages are assembled into packets in a streaming media format Presentation Description (MPD or known as MPEG-DASH. Streaming video format MPEG-DASH run on a platform with the player bitdash teritegrasi bitcoin. With this scheme, the video will have several variants of the bit rates that gave rise to the concept of scalability of streaming video services on the client side. The main target of the mechanism is smooth the MPEG-DASH streaming video display on the client. The simulation results show that the scheme based scalable video streaming MPEG-DASH able to improve the quality of image display on the client side, where the procedure bufering videos can be made constant and fine for the duration of video views

  3. Relation between Streaming Potential and Streaming Electrification Generated by Streaming of Water through a Sandwich-type Cell

    OpenAIRE

    Maruyama, Kazunori; Nikaido, Mitsuru; Hara, Yoshinori; Tanizaki, Yoshie

    2012-01-01

    Both streaming potential and accumulated charge of water flowed out were measured simultaneously using a sandwich-type cell. The voltages generated in divided sections along flow direction satisfied additivity. The sign of streaming potential agreed with that of streaming electrification. The relation between streaming potential and streaming electrification was explained from a viewpoint of electrical double layer in glass-water interface.

  4. Pathways for arsenic from sediments to groundwater to streams: Biogeochemical processes in the Inner Coastal Plain, New Jersey, USA

    Science.gov (United States)

    Barringer, Julia L.; Mumford, Adam; Young, Lily Y.; Reilly, Pamela A.; Bonin, Jennifer L.; Rosman, Robert

    2010-01-01

    The Cretaceous and Tertiary sediments that underlie the Inner Coastal Plain of New Jersey contain the arsenic-rich mineral glauconite. Streambed sediments in two Inner Coastal Plain streams (Crosswicks and Raccoon Creeks) that traverse these glauconitic deposits are enriched in arsenic (15–25 mg/kg), and groundwater discharging to the streams contains elevated levels of arsenic (>80 μg/L at a site on Crosswicks Creek) with arsenite generally the dominant species. Low dissolved oxygen, low or undetectable levels of nitrate and sulfate, detectable sulfide concentrations, and high concentrations of iron and dissolved organic carbon (DOC) in the groundwater indicate that reducing environments are present beneath the streambeds and that microbial activity, fueled by the DOC, is involved in releasing arsenic and iron from the geologic materials. In groundwater with the highest arsenic concentrations at Crosswicks Creek, arsenic respiratory reductase gene (arrA) indicated the presence of arsenic-reducing microbes. From extracted DNA, 16s rRNA gene sequences indicate the microbial community may include arsenic-reducing bacteria that have not yet been described. Once in the stream, iron is oxidized and precipitates as hydroxide coatings on the sediments. Arsenite also is oxidized and co-precipitates with or is sorbed to the iron hydroxides. Consequently, dissolved arsenic concentrations are lower in streamwater than in the groundwater, but the arsenic contributed by groundwater becomes part of the arsenic load in the stream when sediments are suspended during high flow. A strong positive relation between concentrations of arsenic and DOC in the groundwater samples indicates that any process—natural or anthropogenic—that increases the organic carbon concentration in the groundwater could stimulate microbial activity and thus increase the amount of arsenic that is released from the geologic materials.

  5. Watershed Urbanization Linked to Differences in Stream Bacterial Community Composition

    Directory of Open Access Journals (Sweden)

    Jacob D. Hosen

    2017-08-01

    Full Text Available Urbanization strongly influences headwater stream chemistry and hydrology, but little is known about how these conditions impact bacterial community composition. We predicted that urbanization would impact bacterial community composition, but that stream water column bacterial communities would be most strongly linked to urbanization at a watershed-scale, as measured by impervious cover, while sediment bacterial communities would correlate with environmental conditions at the scale of stream reaches. To test this hypothesis, we determined bacterial community composition in the water column and sediment of headwater streams located across a gradient of watershed impervious cover using high-throughput 16S rRNA gene amplicon sequencing. Alpha diversity metrics did not show a strong response to catchment urbanization, but beta diversity was significantly related to watershed impervious cover with significant differences also found between water column and sediment samples. Samples grouped primarily according to habitat—water column vs. sediment—with a significant response to watershed impervious cover nested within each habitat type. Compositional shifts for communities in urbanized streams indicated an increase in taxa associated with human activity including bacteria from the genus Polynucleobacter, which is widespread, but has been associated with eutrophic conditions in larger water bodies. Another indicator of communities in urbanized streams was an OTU from the genus Gallionella, which is linked to corrosion of water distribution systems. To identify changes in bacterial community interactions, bacterial co-occurrence networks were generated from urban and forested samples. The urbanized co-occurrence network was much smaller and had fewer co-occurrence events per taxon than forested equivalents, indicating a loss of keystone taxa with urbanization. Our results suggest that urbanization has significant impacts on the community composition

  6. Sediment transport simulation in an armoured stream

    Science.gov (United States)

    Milhous, Robert T.; Bradley, Jeffrey B.; Loeffler, Cindy L.

    1986-01-01

    Improved methods of calculating bed material stability and transport must be developed for a gravel bed stream having an armoured surface in order to use the HEC-6 model to examine channel change. Good possibilities exist for use of a two layer model based on the Schoklitsch and the Einstein-Brown transport equations. In Einstein-Brown the D35 of the armour is used for stabilities and the D50 of the bed (sub-surface) is used for transport. Data on the armour and sub-surface size distribution needs to be obtained as part of a bed material study in a gravel bed river; a "shovel" sample is not adequate. The Meyer-Peter, Muller equation should not be applied to a gravel bed stream with an armoured surface to estimate the initiation of transport or for calculation of transport at low effective bed shear stress.

  7. Active micromixer using surface acoustic wave streaming

    Science.gov (United States)

    Branch,; Darren W. , Meyer; Grant D. , Craighead; Harold, G [Ithaca, NY

    2011-05-17

    An active micromixer uses a surface acoustic wave, preferably a Rayleigh wave, propagating on a piezoelectric substrate to induce acoustic streaming in a fluid in a microfluidic channel. The surface acoustic wave can be generated by applying an RF excitation signal to at least one interdigital transducer on the piezoelectric substrate. The active micromixer can rapidly mix quiescent fluids or laminar streams in low Reynolds number flows. The active micromixer has no moving parts (other than the SAW transducer) and is, therefore, more reliable, less damaging to sensitive fluids, and less susceptible to fouling and channel clogging than other types of active and passive micromixers. The active micromixer is adaptable to a wide range of geometries, can be easily fabricated, and can be integrated in a microfluidic system, reducing dead volume. Finally, the active micromixer has on-demand on/off mixing capability and can be operated at low power.

  8. Human impacts to mountain streams

    Science.gov (United States)

    Wohl, Ellen

    2006-09-01

    Mountain streams are here defined as channel networks within mountainous regions of the world. This definition encompasses tremendous diversity of physical and biological conditions, as well as history of land use. Human effects on mountain streams may result from activities undertaken within the stream channel that directly alter channel geometry, the dynamics of water and sediment movement, contaminants in the stream, or aquatic and riparian communities. Examples include channelization, construction of grade-control structures or check dams, removal of beavers, and placer mining. Human effects can also result from activities within the watershed that indirectly affect streams by altering the movement of water, sediment, and contaminants into the channel. Deforestation, cropping, grazing, land drainage, and urbanization are among the land uses that indirectly alter stream processes. An overview of the relative intensity of human impacts to mountain streams is provided by a table summarizing human effects on each of the major mountainous regions with respect to five categories: flow regulation, biotic integrity, water pollution, channel alteration, and land use. This table indicates that very few mountains have streams not at least moderately affected by land use. The least affected mountainous regions are those at very high or very low latitudes, although our scientific ignorance of conditions in low-latitude mountains in particular means that streams in these mountains might be more altered than is widely recognized. Four case studies from northern Sweden (arctic region), Colorado Front Range (semiarid temperate region), Swiss Alps (humid temperate region), and Papua New Guinea (humid tropics) are also used to explore in detail the history and effects on rivers of human activities in mountainous regions. The overview and case studies indicate that mountain streams must be managed with particular attention to upstream/downstream connections, hillslope

  9. Abundance of pollution indicator and pathogenic bacteria in Mumbai waters

    Digital Repository Service at National Institute of Oceanography (India)

    Ramaiah, N.; Kolhe, V.; Sadhasivan, A

    As a part of environmental assessment in the Mumbai Harbour region, where large numbers of ships either take in ballast from- or discharge their ballast, many groups of indicator and human pathogenic bacteria were quantified. Samples (water...

  10. Influence of irradiation of bacteria on their thermoresistance

    International Nuclear Information System (INIS)

    Szulc, M.; Stefaniakowa, A.; Tropilo, J.; Stanczak, B.; Peconek, J.; Mierzewska, H.; Bielecka, J.

    1979-01-01

    The influence of x-radiation on thermoresistance of bacteria was determined. The studies were carried out on: E. coli, Pr. vulgaris, S. typhimurium, Staph. aureus and Str. faecalis. The bacteria were irradiated in PBS (physiological buffer solution) and in broth (containing about 1% of protein) with x-rays at radium absorbed doses of 100, 1000, 5000 and 10 000, which was followed immediately by heating at temperatures causing death of part of the bacteria. The results obtained indicate that irradiation of bacteria with small x-ray doses distinctly decreases their thermoresistance. Synergetic action of irradiation and heating of bacteria was observed, increasing with increased irradiation dose. The greatest changes of thermoresistance occurred with Pr. vulgaris, the smallest with S. typhimurium. Thermoresistance of bacteria decreased more strongly on their irradiation in protein-free medium (PBS). (author)

  11. Global pressures, specific responses: effects of nutrient enrichment in streams from different biomes

    International Nuclear Information System (INIS)

    Artigas, Joan; García-Berthou, Emili; Gómez, Nora; Romaní, Anna M; Sabater, Sergi; Bauer, Delia E; Cochero, Joaquín; Cortelezzi, Agustina; Rodrigues-Capítulo, Alberto; Castro, Maria I; Donato, John C; Colautti, Darío C; Elosegi, Arturo; Feijoó, Claudia; Giorgi, Adonis; Leggieri, Leonardo; Muñoz, Isabel

    2013-01-01

    We assessed the effects of nutrient enrichment on three stream ecosystems running through distinct biomes (Mediterranean, Pampean and Andean). We increased the concentrations of N and P in the stream water 1.6–4-fold following a before–after control–impact paired series (BACIPS) design in each stream, and evaluated changes in the biomass of bacteria, primary producers, invertebrates and fish in the enriched (E) versus control (C) reaches after nutrient addition through a predictive-BACIPS approach. The treatment produced variable biomass responses (2–77% of explained variance) among biological communities and streams. The greatest biomass response was observed for algae in the Andean stream (77% of the variance), although fish also showed important biomass responses (about 9–48%). The strongest biomass response to enrichment (77% in all biological compartments) was found in the Andean stream. The magnitude and seasonality of biomass responses to enrichment were highly site specific, often depending on the basal nutrient concentration and on windows of ecological opportunity (periods when environmental constraints other than nutrients do not limit biomass growth). The Pampean stream, with high basal nutrient concentrations, showed a weak response to enrichment (except for invertebrates), whereas the greater responses of Andean stream communities were presumably favored by wider windows of ecological opportunity in comparison to those from the Mediterranean stream. Despite variation among sites, enrichment globally stimulated the algal-based food webs (algae and invertebrate grazers) but not the detritus-based food webs (bacteria and invertebrate shredders). This study shows that nutrient enrichment tends to globally enhance the biomass of stream biological assemblages, but that its magnitude and extent within the food web are complex and are strongly determined by environmental factors and ecosystem structure. (letter)

  12. Industrial-Strength Streaming Video.

    Science.gov (United States)

    Avgerakis, George; Waring, Becky

    1997-01-01

    Corporate training, financial services, entertainment, and education are among the top applications for streaming video servers, which send video to the desktop without downloading the whole file to the hard disk, saving time and eliminating copyrights questions. Examines streaming video technology, lists ten tips for better net video, and ranks…

  13. Data streams: algorithms and applications

    National Research Council Canada - National Science Library

    Muthukrishnan, S

    2005-01-01

    ... massive data sets in general. Researchers in Theoretical Computer Science, Databases, IP Networking and Computer Systems are working on the data stream challenges. This article is an overview and survey of data stream algorithmics and is an updated version of [175]. S. Muthukrishnan Rutgers University, New Brunswick, NJ, USA, muthu@cs...

  14. What Can Hierarchies Do for Data Streams?

    DEFF Research Database (Denmark)

    Yin, Xuepeng; Pedersen, Torben Bach

    Much effort has been put into building data streams management systems for querying data streams. Here, data streams have been viewed as a flow of low-level data items, e.g., sensor readings or IP packet data. Stream query languages have mostly been SQL-based, with the STREAM and TelegraphCQ lang...

  15. Communication among Oral Bacteria

    Science.gov (United States)

    Kolenbrander, Paul E.; Andersen, Roxanna N.; Blehert, David S.; Egland, Paul G.; Foster, Jamie S.; Palmer, Robert J.

    2002-01-01

    Human oral bacteria interact with their environment by attaching to surfaces and establishing mixed-species communities. As each bacterial cell attaches, it forms a new surface to which other cells can adhere. Adherence and community development are spatiotemporal; such order requires communication. The discovery of soluble signals, such as autoinducer-2, that may be exchanged within multispecies communities to convey information between organisms has emerged as a new research direction. Direct-contact signals, such as adhesins and receptors, that elicit changes in gene expression after cell-cell contact and biofilm growth are also an active research area. Considering that the majority of oral bacteria are organized in dense three-dimensional biofilms on teeth, confocal microscopy and fluorescently labeled probes provide valuable approaches for investigating the architecture of these organized communities in situ. Oral biofilms are readily accessible to microbiologists and are excellent model systems for studies of microbial communication. One attractive model system is a saliva-coated flowcell with oral bacterial biofilms growing on saliva as the sole nutrient source; an intergeneric mutualism is discussed. Several oral bacterial species are amenable to genetic manipulation for molecular characterization of communication both among bacteria and between bacteria and the host. A successful search for genes critical for mixed-species community organization will be accomplished only when it is conducted with mixed-species communities. PMID:12209001

  16. PATHOGENICITY OF BIOFILM BACTERIA

    Science.gov (United States)

    There is a paucity of information concerning any link between the microorganisms commonly found in biofilms of drinking water systems and their impacts on human health. For bacteria, culture-based techniques detect only a limited number of the total microorganisms associated wit...

  17. Bacteria-surface interactions.

    Science.gov (United States)

    Tuson, Hannah H; Weibel, Douglas B

    2013-05-14

    The interaction of bacteria with surfaces has important implications in a range of areas, including bioenergy, biofouling, biofilm formation, and the infection of plants and animals. Many of the interactions of bacteria with surfaces produce changes in the expression of genes that influence cell morphology and behavior, including genes essential for motility and surface attachment. Despite the attention that these phenotypes have garnered, the bacterial systems used for sensing and responding to surfaces are still not well understood. An understanding of these mechanisms will guide the development of new classes of materials that inhibit and promote cell growth, and complement studies of the physiology of bacteria in contact with surfaces. Recent studies from a range of fields in science and engineering are poised to guide future investigations in this area. This review summarizes recent studies on bacteria-surface interactions, discusses mechanisms of surface sensing and consequences of cell attachment, provides an overview of surfaces that have been used in bacterial studies, and highlights unanswered questions in this field.

  18. Antifreeze Proteins of Bacteria

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 12; Issue 12. Antifreeze Proteins of Bacteria. M K Chattopadhyay. General Article Volume 12 Issue 12 December 2007 pp 25-30. Fulltext. Click here to view fulltext PDF. Permanent link: https://www.ias.ac.in/article/fulltext/reso/012/12/0025-0030 ...

  19. Foundations for Streaming Model Transformations by Complex Event Processing.

    Science.gov (United States)

    Dávid, István; Ráth, István; Varró, Dániel

    2018-01-01

    Streaming model transformations represent a novel class of transformations to manipulate models whose elements are continuously produced or modified in high volume and with rapid rate of change. Executing streaming transformations requires efficient techniques to recognize activated transformation rules over a live model and a potentially infinite stream of events. In this paper, we propose foundations of streaming model transformations by innovatively integrating incremental model query, complex event processing (CEP) and reactive (event-driven) transformation techniques. Complex event processing allows to identify relevant patterns and sequences of events over an event stream. Our approach enables event streams to include model change events which are automatically and continuously populated by incremental model queries. Furthermore, a reactive rule engine carries out transformations on identified complex event patterns. We provide an integrated domain-specific language with precise semantics for capturing complex event patterns and streaming transformations together with an execution engine, all of which is now part of the Viatra reactive transformation framework. We demonstrate the feasibility of our approach with two case studies: one in an advanced model engineering workflow; and one in the context of on-the-fly gesture recognition.

  20. Interactions among sulfide-oxidizing bacteria

    Science.gov (United States)

    Poplawski, R.

    1985-01-01

    The responses of different phototrophic bacteria in a competitive experimental system are studied, one in which primary factors such as H2S or light limited photometabolism. Two different types of bacteria shared one limited source of sulfide under specific conditions of light. The selection of a purple and a green sulfur bacteria and the cyanobacterium was based on their physiological similarity and also on the fact that they occur together in microbial mats. They all share anoxygenic photosynthesis, and are thus probably part of an evolutionary continuum of phototrophic organisms that runs from, strictly anaerobic physiology to the ability of some cyanobacteria to shift between anoxygenic bacterial style photosynthesis and the oxygenic kind typical of eukaryotes.

  1. Stream Deniable-Encryption Algorithms

    Directory of Open Access Journals (Sweden)

    N.A. Moldovyan

    2016-04-01

    Full Text Available A method for stream deniable encryption of secret message is proposed, which is computationally indistinguishable from the probabilistic encryption of some fake message. The method uses generation of two key streams with some secure block cipher. One of the key streams is generated depending on the secret key and the other one is generated depending on the fake key. The key streams are mixed with the secret and fake data streams so that the output ciphertext looks like the ciphertext produced by some probabilistic encryption algorithm applied to the fake message, while using the fake key. When the receiver or/and sender of the ciphertext are coerced to open the encryption key and the source message, they open the fake key and the fake message. To disclose their lie the coercer should demonstrate possibility of the alternative decryption of the ciphertext, however this is a computationally hard problem.

  2. Stream Clustering of Growing Objects

    Science.gov (United States)

    Siddiqui, Zaigham Faraz; Spiliopoulou, Myra

    We study incremental clustering of objects that grow and accumulate over time. The objects come from a multi-table stream e.g. streams of Customer and Transaction. As the Transactions stream accumulates, the Customers’ profiles grow. First, we use an incremental propositionalisation to convert the multi-table stream into a single-table stream upon which we apply clustering. For this purpose, we develop an online version of K-Means algorithm that can handle these swelling objects and any new objects that arrive. The algorithm also monitors the quality of the model and performs re-clustering when it deteriorates. We evaluate our method on the PKDD Challenge 1999 dataset.

  3. Pilot-Streaming: Design Considerations for a Stream Processing Framework for High-Performance Computing

    OpenAIRE

    Andre Luckow; Peter Kasson; Shantenu Jha

    2016-01-01

    This White Paper (submitted to STREAM 2016) identifies an approach to integrate streaming data with HPC resources. The paper outlines the design of Pilot-Streaming, which extends the concept of Pilot-abstraction to streaming real-time data.

  4. Dynamical modeling of tidal streams

    International Nuclear Information System (INIS)

    Bovy, Jo

    2014-01-01

    I present a new framework for modeling the dynamics of tidal streams. The framework consists of simple models for the initial action-angle distribution of tidal debris, which can be straightforwardly evolved forward in time. Taking advantage of the essentially one-dimensional nature of tidal streams, the transformation to position-velocity coordinates can be linearized and interpolated near a small number of points along the stream, thus allowing for efficient computations of a stream's properties in observable quantities. I illustrate how to calculate the stream's average location (its 'track') in different coordinate systems, how to quickly estimate the dispersion around its track, and how to draw mock stream data. As a generative model, this framework allows one to compute the full probability distribution function and marginalize over or condition it on certain phase-space dimensions as well as convolve it with observational uncertainties. This will be instrumental in proper data analysis of stream data. In addition to providing a computationally efficient practical tool for modeling the dynamics of tidal streams, the action-angle nature of the framework helps elucidate how the observed width of the stream relates to the velocity dispersion or mass of the progenitor, and how the progenitors of 'orphan' streams could be located. The practical usefulness of the proposed framework crucially depends on the ability to calculate action-angle variables for any orbit in any gravitational potential. A novel method for calculating actions, frequencies, and angles in any static potential using a single orbit integration is described in the Appendix.

  5. A Streaming Language Implementation of the Discontinuous Galerkin Method

    Science.gov (United States)

    Barth, Timothy; Knight, Timothy

    2005-01-01

    We present a Brook streaming language implementation of the 3-D discontinuous Galerkin method for compressible fluid flow on tetrahedral meshes. Efficient implementation of the discontinuous Galerkin method using the streaming model of computation introduces several algorithmic design challenges. Using a cycle-accurate simulator, performance characteristics have been obtained for the Stanford Merrimac stream processor. The current Merrimac design achieves 128 Gflops per chip and the desktop board is populated with 16 chips yielding a peak performance of 2 Teraflops. Total parts cost for the desktop board is less than $20K. Current cycle-accurate simulations for discretizations of the 3-D compressible flow equations yield approximately 40-50% of the peak performance of the Merrimac streaming processor chip. Ongoing work includes the assessment of the performance of the same algorithm on the 2 Teraflop desktop board with a target goal of achieving 1 Teraflop performance.

  6. The friendly bacteria within us Commensal bacteria of the intestine ...

    Indian Academy of Sciences (India)

    Balance of bacterial species in the gut · Immunosensory detection of intestinal bacteria · Pathogenic bacteria release interleukin-8 from HT-29 cells · Lactobacillus GG prevents the IL-8 release in response to pathogens · Effect of probiotic bacteria on chemokine response of epithelia to pathogens · PCR array studies in colon ...

  7. Percent Forest Adjacent to Streams (Future)

    Data.gov (United States)

    U.S. Environmental Protection Agency — The type of vegetation along a stream influences the water quality in the stream. Intact buffer strips of natural vegetation along streams tend to intercept...

  8. Stream Habitat Reach Summary - NCWAP [ds158

    Data.gov (United States)

    California Natural Resource Agency — The Stream Habitat - NCWAP - Reach Summary [ds158] shapefile contains in-stream habitat survey data summarized to the stream reach level. It is a derivative of the...

  9. Percent Agriculture Adjacent to Streams (Future)

    Data.gov (United States)

    U.S. Environmental Protection Agency — The type of vegetation along a stream influences the water quality in the stream. Intact buffer strips of natural vegetation along streams tend to intercept...

  10. Stream Macroinvertebrate Occurrence along Gradients in Organic Pollution and Eutrophication

    DEFF Research Database (Denmark)

    Friberg, Nikolai; Skriver, Jens; Larsen, Søren Erik

    2010-01-01

    We analysed a large number of concurrent samples of macroinvertebrate communities and chemical indicators of eutrophication and organic pollution [total-P, total-N, NH4-N, biological oxygen demand (BOD5)] from 594 Danish stream sites. Samples were taken over an 11-year time span as part of the Da......We analysed a large number of concurrent samples of macroinvertebrate communities and chemical indicators of eutrophication and organic pollution [total-P, total-N, NH4-N, biological oxygen demand (BOD5)] from 594 Danish stream sites. Samples were taken over an 11-year time span as part...

  11. Ecosystem and physiological scales of microbial responses to nutrients in a detritus-based stream: results of a 5-year continuous enrichment

    Science.gov (United States)

    Keller Suberkropp; Vladislav Gulis; Amy D. Rosemond; Jonathan Benstead

    2010-01-01

    Our study examined the response of leaf detritus–associated microorganisms (both bacteria and fungi) to a 5-yr continuous nutrient enrichment of a forested headwater stream. Leaf litter dominates detritus inputs to such streams and, on a system wide scale, serves as the key substrate for microbial colonization. We determined physiological responses as microbial biomass...

  12. Rapid diagnostics of the bacteria in air

    Energy Technology Data Exchange (ETDEWEB)

    Belov Nikolai, N. [ATECH KFT, Budapest (Hungary)

    2000-07-01

    Presence of the bacteria and viruses in the air is great problem now. Terrorists are going to use the bacteria weapon. Now biotechnology provides very cheap equipment ({approx} $500) for modification of the bacteria sorts. It may be used for receiving of new variants of the bacteriological weapon. And presence of one small bacteria aerosol generator in the international airport during several days will start the dangerous epidemic incidence the entire world. From another side - poor countries with hot and wet weather are continuously producing new and new dangerous bacteria. Every year epidemic waves of influence are going from China, India or Africa. And once up a time it will be epidemic explosive with fast lethal finish. Methods of estimation of the bio-aerosols in Air of City are very poor. Standard Bio-aerosol sampler has two conflicting demands. From one side the bio-sampler needs in great air volume of sample with great efficiency of separation of aerosol particles from measured air. From another side all selected particles needs in great care. This demand carried out from method of measurement of bacteria in sample by counting of colonies that grew from bacteria on nutrient media after incubation time. It is a problem to prevent bacterial flora from death during collecting aerosol sample. This time of growth and counting of colony is so long that result of this measurement will be unusable if it will be terrorist action of start of bacteriological was. Here presented new methods for fast diagnostics of the bacteria in the air. It consists from 4 general parts: (1) Micro-droplet method for diagnostics of biological active substances in aerosol sample. This method allows to control the bio-particle position on the plate, to use series of biochemistry species for analytical reaction for this small bio-particle. Small volume of biochemical reaction reduces noise. This method provides extremely high sensitivity for discovering of biological material. (2

  13. [Methanotrophic bacteria of acid sphagnum bogs].

    Science.gov (United States)

    Dedysh, S N

    2002-01-01

    Acid sphagnum bogs cover a considerable part of the territory of Russia and are an important natural source of biogenic methane, which is formed in their anaerobic layers. A considerable portion of this methane is consumed in the aerobic part of the bog profile by acidophilic methanotrophic bacteria, which comprise the methane filter of sphagnum bogs and decrease CH4 emission to the atmosphere. For a long time, these bacteria escaped isolation, which became possible only after the elucidation of the optimal conditions of their functioning in situ: pH 4.5 to 5.5; temperature, from 15 to 20 degrees C; and low salt concentration in the solution. Reproduction of these conditions and rejection of earlier used media with a high content of biogenic elements allowed methanotrophic bacteria of two new genera and species--Methylocella palustris and Methylocapsa acidophila--to be isolated from the peat of sphagnum bogs of the northern part of European Russia and West Siberia. These bacteria are well adapted to the conditions in cold, acid, oligotrophic sphagnum bogs. They grow in a pH range of 4.2-7.5 with an optimum at 5.0-5.5, prefer moderate temperatures (15-25 degrees C) and media with a low content of mineral salts (200-500 mg/l), and are capable of active nitrogen fixation. Design of fluorescently labeled 16S rRNA-targeted oligonucleotide probes for the detection of Methylocella palustris and Methylocapsa acidophila and their application to the analysis of sphagnum peat samples showed that these bacteria represent dominant populations of methanotrophs with a density of 10(5)-10(6) cells/g peat. In addition to Methylocella and Methylocapsa populations, one more abundant population of methanotrophs was revealed (10(6) cells/g peat), which were phylogenetically close to the genus Methylocystis.

  14. Spring 5 & reactive streams

    CERN Multimedia

    CERN. Geneva; Clozel, Brian

    2017-01-01

    Spring is a framework widely used by the world-wide Java community, and it is also extensively used at CERN. The accelerator control system is constituted of 10 million lines of Java code, spread across more than 1000 projects (jars) developed by 160 software engineers. Around half of this (all server-side Java code) is based on the Spring framework. Warning: the speakers will assume that people attending the seminar are familiar with Java and Spring’s basic concepts. Spring 5.0 and Spring Boot 2.0 updates (45 min) This talk will cover the big ticket items in the 5.0 release of Spring (including Kotlin support, @Nullable and JDK9) and provide an update on Spring Boot 2.0, which is scheduled for the end of the year. Reactive Spring (1h) Spring Framework 5.0 has been released - and it now supports reactive applications in the Spring ecosystem. During this presentation, we'll talk about the reactive foundations of Spring Framework with the Reactor project and the reactive streams specification. We'll al...

  15. Spatial simulation of smallmouth bass in streams

    International Nuclear Information System (INIS)

    Jager, H.I.; Schmoyer, D.D.; Sale, M.J.; Van Winkle, W.; DeAngelis, D.L.; Sabo, M.J.

    1993-01-01

    The hydropower industry and its regulators are hampered by the inability to predict the relationship between alternative flow regimes and fish population response. We have developed a spatially explicit, individual-based model of populations of small-mouth bass in streams as part of the Compensatory Mechanisms in Fish Populations Program (see Sale and Otto 1991). In the model, the profitability of alternative stream locations varies in response to habitat depth and velocity through changes in the frequency of prey encounters and the metabolic costs experienced by fish. We conducted an evaluation of our hydraulic simulation at the scale of individual stream cells. The potential error in predictions for individual cell velocities suggests that larger-scale model predictions for the representative reach are most appropriate. At this scale, the model appears to produce realistic patterns in the growth and dispersal of young-of-year small-mouth bass. This verification step allows us to proceed with greater confidence in evaluating the original question of how small-mouth bass populations respond to alternative flow regimes

  16. Manufacture of Probiotic Bacteria

    Science.gov (United States)

    Muller, J. A.; Ross, R. P.; Fitzgerald, G. F.; Stanton, C.

    Lactic acid bacteria (LAB) have been used for many years as natural biopreservatives in fermented foods. A small group of LAB are also believed to have beneficial health effects on the host, so called probiotic bacteria. Probiotics have emerged from the niche industry from Asia into European and American markets. Functional foods are one of the fastest growing markets today, with estimated growth to 20 billion dollars worldwide by 2010 (GIA, 2008). The increasing demand for probiotics and the new food markets where probiotics are introduced, challenges the industry to produce high quantities of probiotic cultures in a viable and stable form. Dried concentrated probiotic cultures are the most convenient form for incorporation into functional foods, given the ease of storage, handling and transport, especially for shelf-stable functional products. This chapter will discuss various aspects of the challenges associated with the manufacturing of probiotic cultures.

  17. Knowledge discovery from data streams

    CERN Document Server

    Gama, Joao

    2010-01-01

    Since the beginning of the Internet age and the increased use of ubiquitous computing devices, the large volume and continuous flow of distributed data have imposed new constraints on the design of learning algorithms. Exploring how to extract knowledge structures from evolving and time-changing data, Knowledge Discovery from Data Streams presents a coherent overview of state-of-the-art research in learning from data streams.The book covers the fundamentals that are imperative to understanding data streams and describes important applications, such as TCP/IP traffic, GPS data, sensor networks,

  18. Nord Stream 2: May Cooler Heads Prevail

    International Nuclear Information System (INIS)

    Aoun, Marie-Claire

    2016-01-01

    Since the announcement of the Nord Stream 2 project in June 2015, the debate around the benefits of this project for Europe is raging, putting forward political, economic and commercial arguments. Within the space of a few months, Russia has conducted a radical strategic change towards Europe in its gas policy. Following the announcements in 2014 of a major shift towards Asia, the cancellation of the South Stream project and its replacement by the Turkish Stream, relations with European gas companies have been strengthened since mid-2015. Russia's initiatives to replace its European partners are now to be viewed as part of a transformed international gas landscape. Tensions in the liquefied natural gas (LNG) market following Fukushima have given way to market surpluses. These are characterised on the one hand by lower growth in Asian demand for LNG gas, and on the other hand by the arrival on the market of new major exporters such as Australia and the United States. A new era, more favourable to gas importing countries, has opened up since the end of 2014. Moreover, the key pivot to Asia, expected by Moscow in 2014, is still far off. Discussions with Beijing about the project for a Western route proved to be more difficult than expected. Similarly, negotiations between Turkey and Russia on the Turkish Stream project have been very laborious, having been interrupted for several months because of diplomatic rows between the two countries. Finally, Russia's room for manoeuvre has narrowed, given the collapse in oil and gas prices and Western economic sanctions, which are weighing heavily on its economy. And the increased competitiveness of Russian oil companies due to the ruble devaluation will not transform this situation sustainably

  19. Aspectos básicos de la fijación de nitrógeno atmosférico por parte de bacterias. Estudio en el laboratorio de educación secundaria

    Directory of Open Access Journals (Sweden)

    José Pedro López Pérez

    2016-01-01

    Full Text Available La fijación de nitrógeno atmosférico por parte de microorganismos tiene notable importancia ambiental e industrial relacionada con el incremento de la fertilidad y productividad en los suelos, soporte de las plantas y las redes tróficas derivadas. En el presente artículo se especifica un sencillo protocolo de laboratorio, junto con la base teórica que lo sustenta, con el objetivo de observar los microorganismos responsables de la fijación en los nódulos de leguminosas.

  20. Pepsin homologues in bacteria

    Directory of Open Access Journals (Sweden)

    Bateman Alex

    2009-09-01

    Full Text Available Abstract Background Peptidase family A1, to which pepsin belongs, had been assumed to be restricted to eukaryotes. The tertiary structure of pepsin shows two lobes with similar folds and it has been suggested that the gene has arisen from an ancient duplication and fusion event. The only sequence similarity between the lobes is restricted to the motif around the active site aspartate and a hydrophobic-hydrophobic-Gly motif. Together, these contribute to an essential structural feature known as a psi-loop. There is one such psi-loop in each lobe, and so each lobe presents an active Asp. The human immunodeficiency virus peptidase, retropepsin, from peptidase family A2 also has a similar fold but consists of one lobe only and has to dimerize to be active. All known members of family A1 show the bilobed structure, but it is unclear if the ancestor of family A1 was similar to an A2 peptidase, or if the ancestral retropepsin was derived from a half-pepsin gene. The presence of a pepsin homologue in a prokaryote might give insights into the evolution of the pepsin family. Results Homologues of the aspartic peptidase pepsin have been found in the completed genomic sequences from seven species of bacteria. The bacterial homologues, unlike those from eukaryotes, do not possess signal peptides, and would therefore be intracellular acting at neutral pH. The bacterial homologues have Thr218 replaced by Asp, a change which in renin has been shown to confer activity at neutral pH. No pepsin homologues could be detected in any archaean genome. Conclusion The peptidase family A1 is found in some species of bacteria as well as eukaryotes. The bacterial homologues fall into two groups, one from oceanic bacteria and one from plant symbionts. The bacterial homologues are all predicted to be intracellular proteins, unlike the eukaryotic enzymes. The bacterial homologues are bilobed like pepsin, implying that if no horizontal gene transfer has occurred the duplication

  1. Wastewater treatment plant effluent introduces recoverable shifts in microbial community composition in urban streams

    Science.gov (United States)

    Ledford, S. H.; Price, J. R.; Ryan, M. O.; Toran, L.; Sales, C. M.

    2017-12-01

    New technologies are allowing for intense scrutiny of the impact of land use on microbial communities in stream networks. We used a combination of analytical chemistry, real-time polymerase chain reaction (qPCR) and targeted amplicon sequencing for a preliminary study on the impact of wastewater treatment plant effluent discharge on urban streams. Samples were collected on two dates above and below treatment plants on the Wissahickon Creek, and its tributary, Sandy Run, in Montgomery County, PA, USA. As expected, effluent was observed to be a significant source of nutrients and human and non-specific fecal associated taxa. There was an observed increase in the alpha diversity at locations immediately below effluent outflows, which contributed many taxa involved in wastewater treatment processes and nutrient cycling to the stream's microbial community. Unexpectedly, modeling of microbial community shifts along the stream was not controlled by concentrations of measured nutrients. Furthermore, partial recovery, in the form of decreasing abundances of bacteria and nutrients associated with wastewater treatment plant processes, nutrient cycling bacteria, and taxa associated with fecal and sewage sources, was observed between effluent sources. Antecedent moisture conditions impacted overall microbial community diversity, with higher diversity occurring after rainfall. These findings hint at resilience in stream microbial communities to recover from wastewater treatment plant effluent and are vital to understanding the impacts of urbanization on microbial stream communities.

  2. Re-Meandering of Lowland Streams

    DEFF Research Database (Denmark)

    Pedersen, Morten Lauge; Kristensen, Klaus Kevin; Friberg, Nikolai

    2014-01-01

    We evaluated the restoration of physical habitats and its influence on macroinvertebrate community structure in 18 Danish lowland streams comprising six restored streams, six streams with little physical alteration and six channelized streams. We hypothesized that physical habitats...... and macroinvertebrate communities of restored streams would resemble those of natural streams, while those of the channelized streams would differ from both restored and near-natural streams. Physical habitats were surveyed for substrate composition, depth, width and current velocity. Macroinvertebrates were sampled...... along 100 m reaches in each stream, in edge habitats and in riffle/run habitats located in the center of the stream. Restoration significantly altered the physical conditions and affected the interactions between stream habitat heterogeneity and macroinvertebrate diversity. The substrate in the restored...

  3. ATLAS Live: Collaborative Information Streams

    Energy Technology Data Exchange (ETDEWEB)

    Goldfarb, Steven [Department of Physics, University of Michigan, Ann Arbor, MI 48109 (United States); Collaboration: ATLAS Collaboration

    2011-12-23

    I report on a pilot project launched in 2010 focusing on facilitating communication and information exchange within the ATLAS Collaboration, through the combination of digital signage software and webcasting. The project, called ATLAS Live, implements video streams of information, ranging from detailed detector and data status to educational and outreach material. The content, including text, images, video and audio, is collected, visualised and scheduled using digital signage software. The system is robust and flexible, utilizing scripts to input data from remote sources, such as the CERN Document Server, Indico, or any available URL, and to integrate these sources into professional-quality streams, including text scrolling, transition effects, inter and intra-screen divisibility. Information is published via the encoding and webcasting of standard video streams, viewable on all common platforms, using a web browser or other common video tool. Authorisation is enforced at the level of the streaming and at the web portals, using the CERN SSO system.

  4. ATLAS Live: Collaborative Information Streams

    International Nuclear Information System (INIS)

    Goldfarb, Steven

    2011-01-01

    I report on a pilot project launched in 2010 focusing on facilitating communication and information exchange within the ATLAS Collaboration, through the combination of digital signage software and webcasting. The project, called ATLAS Live, implements video streams of information, ranging from detailed detector and data status to educational and outreach material. The content, including text, images, video and audio, is collected, visualised and scheduled using digital signage software. The system is robust and flexible, utilizing scripts to input data from remote sources, such as the CERN Document Server, Indico, or any available URL, and to integrate these sources into professional-quality streams, including text scrolling, transition effects, inter and intra-screen divisibility. Information is published via the encoding and webcasting of standard video streams, viewable on all common platforms, using a web browser or other common video tool. Authorisation is enforced at the level of the streaming and at the web portals, using the CERN SSO system.

  5. ATLAS Live: Collaborative Information Streams

    CERN Document Server

    Goldfarb, S; The ATLAS collaboration

    2011-01-01

    I report on a pilot project launched in 2010 focusing on facilitating communication and information exchange within the ATLAS Collaboration, through the combination of digital signage software and webcasting. The project, called ATLAS Live, implements video streams of information, ranging from detailed detector and data status to educational and outreach material. The content, including text, images, video and audio, is collected, visualised and scheduled using digital signage software. The system is robust and flexible, utilizing scripts to input data from remote sources, such as the CERN Document Server, Indico, or any available URL, and to integrate these sources into professional-quality streams, including text scrolling, transition effects, inter and intra-screen divisibility. Information is published via the encoding and webcasting of standard video streams, viewable on all common platforms, using a web browser or other common video tool. Authorisation is enforced at the level of the streaming and at th...

  6. STREAMS - Technology Programme. Yearbook 2003

    International Nuclear Information System (INIS)

    2003-01-01

    The STREAMS Technology Programme addresses municipal waste. Municipal waste is composed of waste from households and small businesses. The programme focuses on five areas Waste prevention, Collection, transportation, and management of waste streams, Waste treatment technologies, Waste recycling into raw materials and new products, Landfill technologies. The development projects of the STREAMS Programme utilize a number of different technologies, such as biotechnology, information technology, materials technology, measurement and analysis, and automation technology. Finnish expertise in materials recycling technologies and related electronics and information technology is extremely high on a worldwide scale even though the companies represent SMEs. Started in 2001, the STREAMS programme has a total volume of 27 million euros, half of which is funded by Tekes. The programme runs through the end of 2004. (author)

  7. Cellular Subcompartments through Cytoplasmic Streaming.

    Science.gov (United States)

    Pieuchot, Laurent; Lai, Julian; Loh, Rachel Ann; Leong, Fong Yew; Chiam, Keng-Hwee; Stajich, Jason; Jedd, Gregory

    2015-08-24

    Cytoplasmic streaming occurs in diverse cell types, where it generally serves a transport function. Here, we examine streaming in multicellular fungal hyphae and identify an additional function wherein regimented streaming forms distinct cytoplasmic subcompartments. In the hypha, cytoplasm flows directionally from cell to cell through septal pores. Using live-cell imaging and computer simulations, we identify a flow pattern that produces vortices (eddies) on the upstream side of the septum. Nuclei can be immobilized in these microfluidic eddies, where they form multinucleate aggregates and accumulate foci of the HDA-2 histone deacetylase-associated factor, SPA-19. Pores experiencing flow degenerate in the absence of SPA-19, suggesting that eddy-trapped nuclei function to reinforce the septum. Together, our data show that eddies comprise a subcellular niche favoring nuclear differentiation and that subcompartments can be self-organized as a consequence of regimented cytoplasmic streaming. Copyright © 2015 Elsevier Inc. All rights reserved.

  8. On-stream analysis systems

    International Nuclear Information System (INIS)

    Howarth, W.J.; Watt, J.S.

    1982-01-01

    An outline of some commercially available on-stream analysis systems in given. Systems based on x-ray tube/crystal spectrometers, scintillation detectors, proportional detectors and solid-state detectors are discussed

  9. nitrogen saturation in stream ecosystems

    OpenAIRE

    Earl, S. R.; Valett, H. M.; Webster, J. R.

    2006-01-01

    The concept of nitrogen (N) saturation has organized the assessment of N loading in terrestrial ecosystems. Here we extend the concept to lotic ecosystems by coupling Michaelis-Menten kinetics and nutrient spiraling. We propose a series of saturation response types, which may be used to characterize the proximity of streams to N saturation. We conducted a series of short-term N releases using a tracer ((NO3)-N-15-N) to measure uptake. Experiments were conducted in streams spanning a gradient ...

  10. Trail Creek II: Modeling Flow and E. Coli Concentrations in a Small Urban Stream using SWAT

    Science.gov (United States)

    Radcliffe, D. E.; Saintil, T.

    2017-12-01

    Pathogens are one of the leading causes of stream and river impairment in the State of Georgia. The common presence of fecal bacteria is driven by several factors including rapid population growth stressing pre-existing and ageing infrastructure, urbanization and poor planning, increase percent imperviousness, urban runoff, municipal discharges, sewage, pet/wildlife waste and leaky septic tanks. The Trail Creek watershed, located in Athens-Clarke County, Georgia covers about 33 km2. Stream segments within Trail Creek violate the GA standard due to high levels of fecal coliform bacteria. In this study, the Soil and Water Assessment Tool (SWAT) modeling software was used to predict E. coli bacteria concentrations during baseflow and stormflow. Census data from the county was used for human and animal population estimates and the Fecal Indicator Tool to generate the number of colony forming units of E. Coli for each source. The model was calibrated at a daily time step with one year of monitored streamflow and E. coli bacteria data using SWAT-CUP and the SUFI2 algorithm. To simulate leaking sewer lines, we added point sources in the five subbasins in the SWAT model with the greatest length of sewer line within 50 m of the stream. The flow in the point sources were set to 5% of the stream flow and the bacteria count set to that of raw sewage (30,000 cfu/100 mL). The calibrated model showed that the average load during 2003-2013 at the watershed outlet was 13 million cfu per month. Using the calibrated model, we simulated scenarios that assumed leaking sewers were repaired in one of the five subbasins with point sources. The reduction ranged from 10 to 46%, with the largest reduction in subbasin in the downtown area. Future modeling work will focus on the use of green infrastructure to address sources of bacteria.

  11. Uptake of americium-241 by algae and bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Geisy, J P; Paine, D

    1978-01-01

    Algae and bacteria are important factors in the transport and mobilization of elements in the biosphere. These factors may be involved in trophic biomagnification, resulting in a potential human hazard or environmental degradation. Although americium, one of the most toxic elements known, is not required for plant growth, it may be concentrated by algae and bacteria. Therefore, the availability of americium-241 to algae and bacteria was studied to determine their role in the ultimate fate of this element released into the environment. Both algae and bacteria concentrated americium-241 to a high degree, making them important parts of the biomagnification process. The ability to concentrate americium-241 makes algae and bacteria potentially significant factors in cycling this element in the water column. (4 graphs, numerous references, 3 tables)

  12. Biological treatment of sulfidic spent caustics under haloalkaline conditions using soda lake bacteria

    NARCIS (Netherlands)

    Graaff, de C.M.

    2012-01-01

    In this thesis, the development of a newbiotechnological process for the treatment of undiluted sulfidic spent caustics (SSC’s) using soda lake bacteria is described. SSC’s are waste solutions that are formed in the oil and gas industry due to the caustic (NaOH) scrubbing of hydrocarbon streams

  13. Frequency and antibiotic resistance patterns of isolated bacteria from positive blood culture of hospitalized patients

    Directory of Open Access Journals (Sweden)

    Azadeh Vahedi

    2018-03-01

    Conclusion: The most prevalent bacterial isolate among the blood cultures of patients was Pseudomonas. The patients more than 50 years were more susceptible to blood stream infections. The most bacteria were isolated from the internal medicine department of hospital. The antibiotic resistance was also increasing especially in Acinetobacter, Staphylococcus coagulase negative, Escherichia coil and Klebsiella

  14. Streamflow, a GIS-based Environmental Assessment Tool for Lowland Streams

    NARCIS (Netherlands)

    Pieterse, N.M.; Olde Venterink, H.; Schot, P.P.; Verkroost, A.W.M.

    1998-01-01

    Human activities, such as stream management, drainage, urbanization and agriculture, heavily influence the aquatic ecosystems in small lowland streams. For the assessment of the impact of human activities of aquatic ecosystems, a modeling tool is created. This modeling tool is part of the EU-life

  15. Red River Stream Improvement Final Design Nez Perce National Forest.

    Energy Technology Data Exchange (ETDEWEB)

    Watershed Consulting, LLC

    2007-03-15

    This report details the final stream improvement design along the reach of Red River between the bridge below Dawson Creek, upstream for approximately 2 miles, Idaho County, Idaho. Geomorphic mapping, hydrologic profiles and cross-sections were presented along with existing fish habitat maps in the conceptual design report. This information is used to develop a stream improvement design intended to improve aquatic habitat and restore riparian health in the reach. The area was placer mined using large bucket dredges between 1938 and 1957. This activity removed most of the riparian vegetation in the stream corridor and obliterated the channel bed and banks. The reach was also cut-off from most valley margin tributaries. In the 50 years since large-scale dredging ceased, the channel has been re-established and parts of the riparian zone have grown in. However, the recruitment of large woody debris to the stream has been extremely low and overhead cover is poor. Pool habitat makes up more than 37% of the reach, and habitat diversity is much better than the project reach on Crooked River. There is little large woody debris in the stream to provide cover for spawning and juvenile rearing, because the majority of the woody debris does not span a significant part of the channel, but is mainly on the side slopes of the stream. Most of the riparian zone has very little soil or subsoil left after the mining and so now consists primarily of unconsolidated cobble tailings or heavily compacted gravel tailings. Knapweed and lodgepole pine are the most successful colonizers of these post mining landforms. Tributary fans which add complexity to many other streams in the region, have been isolated from the main reach due to placer mining and road building.

  16. Roughness-induced streaming in turbulent wave boundary layers

    DEFF Research Database (Denmark)

    Fuhrman, David R.; Sumer, B. Mutlu; Fredsøe, Jørgen

    2011-01-01

    -averaged streaming characteristics induced by bottom roughness variations are systematically assessed. The effects of variable roughness ratio, gradual roughness transitions, as well as changing flow orientation in plan are all considered. As part of the latter, roughness-induced secondary flows are predicted...

  17. Process for humidifying a gaseous fuel stream

    International Nuclear Information System (INIS)

    Sederquist, R. A.

    1985-01-01

    A fuel gas stream for a fuel cell is humidified by a recirculating hot liquid water stream using the heat of condensation from the humidified stream as the heat to vaporize the liquid water. Humidification is accomplished by directly contacting the liquid water with the dry gas stream in a saturator to evaporate a small portion of water. The recirculating liquid water is reheated by direct contact with the humidified gas stream in a condenser, wherein water is condensed into the liquid stream. Between the steps of humidifying and condensing water from the gas stream it passes through the fuel cell and additional water, in the form of steam, is added thereto

  18. Functional amyloids in bacteria.

    Science.gov (United States)

    Romero, Diego; Kolter, Roberto

    2014-06-01

    The term amyloidosis is used to refer to a family of pathologies altering the homeostasis of human organs. Despite having a name that alludes to starch content, the amyloid accumulations are made up of proteins that polymerize as long and rigid fibers. Amyloid proteins vary widely with respect to their amino acid sequences but they share similarities in their quaternary structure; the amyloid fibers are enriched in β-sheets arranged perpendicular to the axis of the fiber. This structural feature provides great robustness, remarkable stability, and insolubility. In addition, amyloid proteins specifically stain with certain dyes such as Congo red and thioflavin-T. The aggregation into amyloid fibers, however, it is not restricted to pathogenic processes, rather it seems to be widely distributed among proteins and polypeptides. Amyloid fibers are present in insects, fungi and bacteria, and they are important in maintaining the homeostasis of the organism. Such findings have motivated the use of the term "functional amyloid" to differentiate these amyloid proteins from their toxic siblings. This review focuses on systems that have evolved in bacteria that control the expression and assembly of amyloid proteins on cell surfaces, such that the robustness of amyloid proteins are used towards a beneficial end. Copyright© by the Spanish Society for Microbiology and Institute for Catalan Studies.

  19. Methylmercury bioaccumulation in invertebrates of boreal streams in Norway: Effects of aqueous methylmercury and diet retention

    International Nuclear Information System (INIS)

    Wit, Heleen A. de; Kainz, Martin J.; Lindholm, Markus

    2012-01-01

    Transfer of aqueous methylmercury (MeHg) to primary consumers in aquatic foodwebs is poorly understood despite its importance for bioaccumulation of MeHg. We studied bioaccumulation of MeHg in simple aquatic food chains of two humic boreal streams in relation to streamwater chemistry, food web characteristics and dietary fatty acid (FA) biomarkers. Transfer of aqueous MeHg into primary consumers was similar in both streams, resulting in higher MeHg in consumers in the MeHg-rich stream. Trophic enrichment of MeHg and dietary retention of FA biomarkers was the same in both streams, suggesting that exposure to aqueous MeHg at the base of the food chain determined levels of MeHg in biota. In addition, contents of dietary biomarkers suggested that ingestion of algae reduced MeHg bioaccumulation, while ingestion of bacteria stimulated MeHg uptake. Dietary uptake of bacteria could thus be an important pathway for MeHg-transfer at the bottom of food chains in humic streams. - Highlights: ► We examined MeHg bioaccumulation in simple food chains in two boreal streams. ► Higher MeHg in invertebrates was associated with higher aqueous MeHg. ► Dietary biomarkers showed that consumers in both streams accessed similar food sources. ► We concluded at exposure to aqueous MeHg determined bioaccumulation of MeHg. ► Seasonal variation in MeHg in biota could be related to diet using dietary biomarkers. - Exposure to aqueous methylmercury at the base of the food chain in boreal streams determines mercury in aquatic biota at higher trophic levels.

  20. Impact of Roadway Stormwater Runoff on Microbial Contamination in the Receiving Stream.

    Science.gov (United States)

    Wyckoff, Kristen N; Chen, Si; Steinman, Andrew J; He, Qiang

    2017-09-01

    Stormwater runoff from roadways has increasingly become a regulatory concern for water pollution control. Recent work has suggested roadway stormwater runoff as a potential source of microbial pollutants. The objective of this study was to determine the impact of roadway runoff on the microbiological quality of receiving streams. Microbiological quality of roadway stormwater runoff and the receiving stream was monitored during storm events with both cultivation-dependent fecal bacteria enumeration and cultivation-independent high-throughput sequencing techniques. Enumeration of total coliforms as a measure of fecal microbial pollution found consistently lower total coliform counts in roadway runoff than those in the stream water, suggesting that roadway runoff was not a major contributor of microbial pollutants to the receiving stream. Further characterization of the microbial community in the stormwater samples by 16S ribosomal RNA gene-based high-throughput amplicon sequencing revealed significant differences in the microbial composition of stormwater runoff from the roadways and the receiving stream. The differences in microbial composition between the roadway runoff and stream water demonstrate that roadway runoff did not appear to have a major influence on the stream in terms of microbiological quality. Thus, results from both fecal bacteria enumeration and high-throughput amplicon sequencing techniques were consistent that roadway stormwater runoff was not the primary contributor of microbial loading to the stream. Further studies of additional watersheds with distinct characteristics are needed to validate these findings. Understanding gained in this study could support the development of more effective strategies for stormwater management in sensitive watersheds. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  1. Fish populations in Plynlimon streams

    Directory of Open Access Journals (Sweden)

    D. T. Crisp

    1997-01-01

    Full Text Available In Plynlimon streams, brown trout (Salmo trutta L. are widespread in the upper Wye at population densities of 0.03 to 0.32 fish m-2 and show evidence of successful recruitment in most years. In the upper Severn, brown trout are found only in an area of c. 1670 -2 downstream of Blaenhafren Falls at densities of 0.03 to 0.24 fish -2 and the evidence suggests very variable year to year success in recruitment (Crisp & Beaumont, 1996. Analyses of the data show that temperature differences between afforested and unafforested streams may affect the rates of trout incubation and growth but are not likely to influence species survival. Simple analyses of stream discharge data suggest, but do not prove, that good years for recruitment in the Hafren population were years of low stream discharge. This may be linked to groundwater inputs detected in other studies in this stream. More research is needed to explain the survival of the apparently isolated trout population in the Hafren.

  2. Streaming Compression of Hexahedral Meshes

    Energy Technology Data Exchange (ETDEWEB)

    Isenburg, M; Courbet, C

    2010-02-03

    We describe a method for streaming compression of hexahedral meshes. Given an interleaved stream of vertices and hexahedral our coder incrementally compresses the mesh in the presented order. Our coder is extremely memory efficient when the input stream documents when vertices are referenced for the last time (i.e. when it contains topological finalization tags). Our coder then continuously releases and reuses data structures that no longer contribute to compressing the remainder of the stream. This means in practice that our coder has only a small fraction of the whole mesh in memory at any time. We can therefore compress very large meshes - even meshes that do not file in memory. Compared to traditional, non-streaming approaches that load the entire mesh and globally reorder it during compression, our algorithm trades a less compact compressed representation for significant gains in speed, memory, and I/O efficiency. For example, on the 456k hexahedra 'blade' mesh, our coder is twice as fast and uses 88 times less memory (only 3.1 MB) with the compressed file increasing about 3% in size. We also present the first scheme for predictive compression of properties associated with hexahedral cells.

  3. Radiation-resistant asporogenic bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Yano, K [Tokyo Univ. (Japan). Faculty of Agriculture

    1975-09-01

    This paper reports the biological and ecological examinations on the radiation-resistant asporogenic bacteria (mainly concerning Micrococcus radiodurans). Radiation-resistant asporogenic bacteria were isolated from the irradiated areas of the natural world as well as from the general areas and from the Rn waters in the Misasa hot spring. The acquiring of the tolerance to radiation in bacteria was also examined. In addition, the future problems of microbiological treatment with irradiation were mentioned.

  4. Radiation-resistant asporogenic bacteria

    International Nuclear Information System (INIS)

    Yano, Keiji

    1975-01-01

    This paper reports the biological and ecological examinations on the radiation-resistant asporogenic bacteria (mainly concerning Micrococcus radiodurans). Radiation-resistant asporogenic bacteria were isolated from the irradiated areas of the natural world as well as from the general areas and from the Rn waters in the Misasa hot spring. The acquiring of the tolerance to radiation in bacteria was also examined. In addition, the future problems of microbiological treatment with irradiation were mentioned. (Tsukamoto, Y.)

  5. The Morphology of Streams Restored for Market and Nonmarket Purposes: Insights From a Mixed Natural-Social Science Approach

    Science.gov (United States)

    Singh, J.; Doyle, M.; Lave, R.; Robertson, M.

    2015-12-01

    Stream restoration is increasingly driven by compensatory mitigation; impacts to streams associated with typical land development activities must be offset via restoration of streams elsewhere. This policy creates an environment where restored stream 'credits' are traded under market-like conditions, comparable to wetland mitigation, carbon offsets, or endangered species habitat banking. The effect of mitigation on restoration design and construction is unknown. We use geomorphic surveys to quantify the differences between restored and nonrestored streams, and the difference between streams restored for market purposes (compensatory mitigation) from those restored for nonmarket programs. Physical study sites are located in the state of North Carolina, USA. We also analyze the social and political-economic drivers of the stream restoration and mitigation industry using analysis of policy documents and interviews with key personnel including regulators, mitigation bankers, stream designers, and scientists. Restored streams are typically wider, shallower and geomorphically more homogeneous than nonrestored streams. For example, nonrestored streams are typically characterized by more than an order of magnitude variability in radius of curvature and meander wavelength within a single study reach. By contrast, the radius of curvature in many restored streams does not vary for nearly the entire project reach. Streams restored for the mitigation market are typically headwater streams and part of a large, complex of long restored main channels, and many restored tributaries; streams restored for nonmarket purposes are typically shorter and consist of the main channel only. Interviews reveal that social forces shape the morphology of restored streams. Designers integrate many influences including economic and regulatory constraints, but traditions of practice have a large influence as well. Home to a fairly mature stream mitigation banking market, North Carolina can provide

  6. ATLAS Live: Collaborative Information Streams

    CERN Document Server

    Goldfarb, S; The ATLAS collaboration

    2010-01-01

    I report on a pilot project launched in 2010 focusing on facilitating communication and information exchange within the ATLAS Collaboration, through the combination of digital signage software and webcasting. The project, called ATLAS Live, implements video streams of information, ranging from detailed detector and data status to educational and outreach material. The content, including text, images, video and audio, is collected, visualised and scheduled using the SCALA digital signage software system. The system is robust and flexible, allowing for the usage of scripts to input data from remote sources, such as the CERN Document Server, Indico, or any available URL, and to integrate these sources into professional-quality streams, including text scrolling, transition effects, inter and intrascreen divisibility. The video is made available to the collaboration or public through the encoding and webcasting of standard video streams, viewable on all common platforms, using a web browser or other common video t...

  7. Streaming simplification of tetrahedral meshes.

    Science.gov (United States)

    Vo, Huy T; Callahan, Steven P; Lindstrom, Peter; Pascucci, Valerio; Silva, Cláudio T

    2007-01-01

    Unstructured tetrahedral meshes are commonly used in scientific computing to represent scalar, vector, and tensor fields in three dimensions. Visualization of these meshes can be difficult to perform interactively due to their size and complexity. By reducing the size of the data, we can accomplish real-time visualization necessary for scientific analysis. We propose a two-step approach for streaming simplification of large tetrahedral meshes. Our algorithm arranges the data on disk in a streaming, I/O-efficient format that allows coherent access to the tetrahedral cells. A quadric-based simplification is sequentially performed on small portions of the mesh in-core. Our output is a coherent streaming mesh which facilitates future processing. Our technique is fast, produces high quality approximations, and operates out-of-core to process meshes too large for main memory.

  8. Shotgun metagenomic data streams: surfing without fear

    Energy Technology Data Exchange (ETDEWEB)

    Berendzen, Joel R [Los Alamos National Laboratory

    2010-12-06

    Timely information about bio-threat prevalence, consequence, propagation, attribution, and mitigation is needed to support decision-making, both routinely and in a crisis. One DNA sequencer can stream 25 Gbp of information per day, but sampling strategies and analysis techniques are needed to turn raw sequencing power into actionable knowledge. Shotgun metagenomics can enable biosurveillance at the level of a single city, hospital, or airplane. Metagenomics characterizes viruses and bacteria from complex environments such as soil, air filters, or sewage. Unlike targeted-primer-based sequencing, shotgun methods are not blind to sequences that are truly novel, and they can measure absolute prevalence. Shotgun metagenomic sampling can be non-invasive, efficient, and inexpensive while being informative. We have developed analysis techniques for shotgun metagenomic sequencing that rely upon phylogenetic signature patterns. They work by indexing local sequence patterns in a manner similar to web search engines. Our methods are laptop-fast and favorable scaling properties ensure they will be sustainable as sequencing methods grow. We show examples of application to soil metagenomic samples.

  9. Acoustofluidic bacteria separation

    International Nuclear Information System (INIS)

    Li, Sixing; Huang, Tony Jun; Ma, Fen; Zeng, Xiangqun; Bachman, Hunter; Cameron, Craig E

    2017-01-01

    Bacterial separation from human blood samples can help with the identification of pathogenic bacteria for sepsis diagnosis. In this work, we report an acoustofluidic device for label-free bacterial separation from human blood samples. In particular, we exploit the acoustic radiation force generated from a tilted-angle standing surface acoustic wave (taSSAW) field to separate Escherichia coli from human blood cells based on their size difference. Flow cytometry analysis of the E. coli separated from red blood cells shows a purity of more than 96%. Moreover, the label-free electrochemical detection of the separated E. coli displays reduced non-specific signals due to the removal of blood cells. Our acoustofluidic bacterial separation platform has advantages such as label-free separation, high biocompatibility, flexibility, low cost, miniaturization, automation, and ease of in-line integration. The platform can be incorporated with an on-chip sensor to realize a point-of-care sepsis diagnostic device. (paper)

  10. Acoustofluidic bacteria separation

    Science.gov (United States)

    Li, Sixing; Ma, Fen; Bachman, Hunter; Cameron, Craig E.; Zeng, Xiangqun; Huang, Tony Jun

    2017-01-01

    Bacterial separation from human blood samples can help with the identification of pathogenic bacteria for sepsis diagnosis. In this work, we report an acoustofluidic device for label-free bacterial separation from human blood samples. In particular, we exploit the acoustic radiation force generated from a tilted-angle standing surface acoustic wave (taSSAW) field to separate Escherichia coli from human blood cells based on their size difference. Flow cytometry analysis of the E. coli separated from red blood cells shows a purity of more than 96%. Moreover, the label-free electrochemical detection of the separated E. coli displays reduced non-specific signals due to the removal of blood cells. Our acoustofluidic bacterial separation platform has advantages such as label-free separation, high biocompatibility, flexibility, low cost, miniaturization, automation, and ease of in-line integration. The platform can be incorporated with an on-chip sensor to realize a point-of-care sepsis diagnostic device.

  11. Bacteria, phages and septicemia.

    Directory of Open Access Journals (Sweden)

    Ausra Gaidelyte

    Full Text Available The use of phages is an attractive option to battle antibiotic resistant bacteria in certain bacterial infections, but the role of phage ecology in bacterial infections is obscure. Here we surveyed the phage ecology in septicemia, the most severe type of bacterial infection. We observed that the majority of the bacterial isolates from septicemia patients spontaneously secreted phages active against other isolates of the same bacterial strain, but not to the strain causing the disease. Such phages were also detected in the initial blood cultures, indicating that phages are circulating in the blood at the onset of sepsis. The fact that most of the septicemic bacterial isolates carry functional prophages suggests an active role of phages in bacterial infections. Apparently, prophages present in sepsis-causing bacterial clones play a role in clonal selection during bacterial invasion.

  12. Pollutant transport in natural streams

    International Nuclear Information System (INIS)

    Buckner, M.R.; Hayes, D.W.

    1975-01-01

    A mathematical model has been developed to estimate the downstream effect of chemical and radioactive pollutant releases to tributary streams and rivers. The one-dimensional dispersion model was employed along with a dead zone model to describe stream transport behavior. Options are provided for sorption/desorption, ion exchange, and particle deposition in the river. The model equations are solved numerically by the LODIPS computer code. The solution method was verified by application to actual and simulated releases of radionuclides and other chemical pollutants. (U.S.)

  13. Temperature of the Gulf Stream

    Science.gov (United States)

    2002-01-01

    The Gulf Stream is one of the strong ocean currents that carries warm water from the sunny tropics to higher latitudes. The current stretches from the Gulf of Mexico up the East Coast of the United States, departs from North America south of the Chesapeake Bay, and heads across the Atlantic to the British Isles. The water within the Gulf Stream moves at the stately pace of 4 miles per hour. Even though the current cools as the water travels thousands of miles, it remains strong enough to moderate the Northern European climate. The image above was derived from the infrared measurements of the Moderate-resolution Imaging Spectroradiometer (MODIS) on a nearly cloud-free day over the east coast of the United States. The coldest waters are shown as purple, with blue, green, yellow, and red representing progressively warmer water. Temperatures range from about 7 to 22 degrees Celsius. The core of the Gulf Stream is very apparent as the warmest water, dark red. It departs from the coast at Cape Hatteras, North Carolina. The cool, shelf water from the north entrains the warmer outflows from the Chesapeake and Delaware Bays. The north wall of the Gulf Stream reveals very complex structure associated with frontal instabilities that lead to exchanges between the Gulf Stream and inshore waters. Several clockwise-rotating warm core eddies are evident north of the core of the Gulf Stream, which enhance the exchange of heat and water between the coastal and deep ocean. Cold core eddies, which rotate counter clockwise, are seen south of the Gulf Stream. The one closest to Cape Hatteras is entraining very warm Gulf Stream waters on its northwest circumference. Near the coast, shallower waters have warmed due to solar heating, while the deeper waters offshore are markedly cooler (dark blue). MODIS made this observation on May 8, 2000, at 11:45 a.m. EDT. For more information, see the MODIS-Ocean web page. The sea surface temperature image was created at the University of Miami using

  14. Measuring nutrient spiralling in streams

    Energy Technology Data Exchange (ETDEWEB)

    Newbold, J D; Elwood, J W; O' Neill, R V; Van Winkle, W

    1981-01-01

    Nutrient cycling in streams involves some downstream transport before the cycle is completed. Thus, the path traveled by a nutrient atom in passing through the cycle can be visualized as a spiral. As an index of the spiralling process, we introduce spiralling length, defined as the average distance associated with one complete cycle of a nutrient atom. This index provides a measure of the utilization of nutrients relative to the available supply from upstream. Using /sup 32/p as a tracer, we estimated a spiralling length of 193 m for phosphorus in a small woodland stream.

  15. Stream-processing pipelines: processing of streams on multiprocessor architecture

    NARCIS (Netherlands)

    Kavaldjiev, N.K.; Smit, Gerardus Johannes Maria; Jansen, P.G.

    In this paper we study the timing aspects of the operation of stream-processing applications that run on a multiprocessor architecture. Dependencies are derived for the processing and communication times of the processors in such a system. Three cases of real-time constrained operation and four

  16. Enhancing Network Data Obliviousness in Trusted Execution Environment-based Stream Processing Systems

    KAUST Repository

    Alsibyani, Hassan M.

    2018-01-01

    . For each of the techniques, we explore their effectiveness in terms of the advantage they provide in overcoming the network leakage. The techniques are tested partly using simulations and some were implemented in a prototype SGX-based stream processing

  17. CAMS: OLAPing Multidimensional Data Streams Efficiently

    Science.gov (United States)

    Cuzzocrea, Alfredo

    In the context of data stream research, taming the multidimensionality of real-life data streams in order to efficiently support OLAP analysis/mining tasks is a critical challenge. Inspired by this fundamental motivation, in this paper we introduce CAMS (C ube-based A cquisition model for M ultidimensional S treams), a model for efficiently OLAPing multidimensional data streams. CAMS combines a set of data stream processing methodologies, namely (i) the OLAP dimension flattening process, which allows us to obtain dimensionality reduction of multidimensional data streams, and (ii) the OLAP stream aggregation scheme, which aggregates data stream readings according to an OLAP-hierarchy-based membership approach. We complete our analytical contribution by means of experimental assessment and analysis of both the efficiency and the scalability of OLAPing capabilities of CAMS on synthetic multidimensional data streams. Both analytical and experimental results clearly connote CAMS as an enabling component for next-generation Data Stream Management Systems.

  18. Salamander occupancy in headwater stream networks

    Science.gov (United States)

    Grant, E.H.C.; Green, L.E.; Lowe, W.H.

    2009-01-01

    1. Stream ecosystems exhibit a highly consistent dendritic geometry in which linear habitat units intersect to create a hierarchical network of connected branches. 2. Ecological and life history traits of species living in streams, such as the potential for overland movement, may interact with this architecture to shape patterns of occupancy and response to disturbance. Specifically, large-scale habitat alteration that fragments stream networks and reduces connectivity may reduce the probability a stream is occupied by sensitive species, such as stream salamanders. 3. We collected habitat occupancy data on four species of stream salamanders in first-order (i.e. headwater) streams in undeveloped and urbanised regions of the eastern U.S.A. We then used an information-theoretic approach to test alternative models of salamander occupancy based on a priori predictions of the effects of network configuration, region and salamander life history. 4. Across all four species, we found that streams connected to other first-order streams had higher occupancy than those flowing directly into larger streams and rivers. For three of the four species, occupancy was lower in the urbanised region than in the undeveloped region. 5. These results demonstrate that the spatial configuration of stream networks within protected areas affects the occurrences of stream salamander species. We strongly encourage preservation of network connections between first-order streams in conservation planning and management decisions that may affect stream species.

  19. Using Video to Communicate Scientific Findings -- Habitat Connections in Urban Streams

    Science.gov (United States)

    Harned, D. A.; Moorman, M.; Fitzpatrick, F. A.; McMahon, G.

    2011-12-01

    The U.S Geological Survey (USGS) National Water-Quality Assessment Program (NAWQA) provides information about (1) water-quality conditions and how those conditions vary locally, regionally, and nationally, (2) water-quality trends, and (3) factors that affect those conditions. As part of the NAWQA Program, the Effects of Urbanization on Stream Ecosystems (EUSE) study examined the vulnerability and resilience of streams to urbanization. Completion of the EUSE study has resulted in over 20 scientific publications. Video podcasts are being used in addition to these publications to communicate the relevance of these scientific findings to more general audiences such as resource managers, educational groups, public officials, and the general public. An example of one of the podcasts is a film examining effects of urbanization on stream habitat. "Habitat Connections in Urban Streams" explores how urbanization changes some of the physical features that provide in-stream habitat and examines examples of stream restoration projects designed to improve stream form and function. The "connections" theme is emphasized, including the connection of in-stream habitats from the headwaters to the stream mouth; connections between stream habitat and the surrounding floodplains, wetlands and basin; and connections between streams and people-- resource managers, public officials, scientists, and the general public. Examples of innovative stream restoration projects in Baltimore Maryland; Milwaukee, Wisconsin; and Portland Oregon are shown with interviews of managers, engineers, scientists, and others describing the projects. The film is combined with a website with links to extended film versions of the stream-restoration project interviews. The website and films are an example of USGS efforts aimed at improving science communication to a general audience. The film is available for access from the EUSE website: http://water.usgs.gov/nawqa/urban/html/podcasts.html. Additional films are

  20. Decoupling of dissolved organic matter patterns between stream and riparian groundwater in a headwater forested catchment

    Science.gov (United States)

    Bernal, Susana; Lupon, Anna; Catalán, Núria; Castelar, Sara; Martí, Eugènia

    2018-03-01

    Streams are important sources of carbon to the atmosphere, though knowing whether they merely outgas terrestrially derived carbon dioxide or mineralize terrestrial inputs of dissolved organic matter (DOM) is still a big challenge in ecology. The objective of this study was to investigate the influence of riparian groundwater (GW) and in-stream processes on the temporal pattern of stream DOM concentrations and quality in a forested headwater stream, and whether this influence differed between the leaf litter fall (LLF) period and the remaining part of the year (non-LLF). The spectroscopic indexes (fluorescence index, biological index, humification index, and parallel factor analysis components) indicated that DOM had an eminently protein-like character and was most likely originated from microbial sources and recent biological activity in both stream water and riparian GW. However, paired samples of stream water and riparian GW showed that dissolved organic carbon (DOC) and nitrogen (DON) concentrations as well as the spectroscopic character of DOM differed between the two compartments throughout the year. A simple mass balance approach indicated that in-stream processes along the reach contributed to reducing DOC and DON fluxes by 50 and 30 %, respectively. Further, in-stream DOC and DON uptakes were unrelated to each other, suggesting that these two compounds underwent different biogeochemical pathways. During the LLF period, stream DOC and DOC : DON ratios were higher than during the non-LLF period, and spectroscopic indexes suggested a major influence of terrestrial vegetation on stream DOM. Our study highlights that stream DOM is not merely a reflection of riparian GW entering the stream and that headwater streams have the capacity to internally produce, transform, and consume DOM.

  1. Comparative cytotoxicity of periodontal bacteria

    International Nuclear Information System (INIS)

    Stevens, R.H.; Hammond, B.F.

    1988-01-01

    The direct cytotoxicity of sonic extracts (SE) from nine periodontal bacteria for human gingival fibroblasts (HGF) was compared. Equivalent dosages (in terms of protein concentration) of SE were used to challenge HGF cultures. The cytotoxic potential of each SE was assessed by its ability to (1) inhibit HGF proliferation, as measured by direct cell counts; (2) inhibit 3H-thymidine incorporation in HGF cultures; or (3) cause morphological alterations of the cells in challenged cultures. The highest concentration (500 micrograms SE protein/ml) of any of the SEs used to challenge the cells was found to be markedly inhibitory to the HGFs by all three of the criteria of cytotoxicity. At the lowest dosage tested (50 micrograms SE protein/ml); only SE from Actinobacillus actinomycetemcomitans, Bacteroides gingivalis, and Fusobacterium nucleatum caused a significant effect (greater than 90% inhibition or overt morphological abnormalities) in the HGFs as determined by any of the criteria employed. SE from Capnocytophaga sputigena, Eikenella corrodens, or Wolinella recta also inhibited cell proliferation and thymidine incorporation at this dosage; however, the degree of inhibition (5-50%) was consistently, clearly less than that of the first group of three organisms named above. The SE of the three other organisms tested (Actinomyces odontolyticus, Bacteroides intermedius, and Streptococcus sanguis) had little or no effect (0-10% inhibition) at this concentration. The data suggest that the outcome of the interaction between bacterial components and normal resident cells of the periodontium is, at least in part, a function of the bacterial species

  2. Bottle data collected for chemical analysis along the coastal waters of Hawai'i as part of the Windward Community College Heeia Stream and Kaneohe Bay Water Quality Assessment Project from May 22, 2004 to March 19, 2005 (NODC Accession 0002449)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Measurements of water quality parameters were taken by Windward Community College faculty and students at eight sites in the Heeia Stream and adjacent Kaneohe Bay...

  3. Interactive real-time media streaming with reliable communication

    Science.gov (United States)

    Pan, Xunyu; Free, Kevin M.

    2014-02-01

    Streaming media is a recent technique for delivering multimedia information from a source provider to an end- user over the Internet. The major advantage of this technique is that the media player can start playing a multimedia file even before the entire file is transmitted. Most streaming media applications are currently implemented based on the client-server architecture, where a server system hosts the media file and a client system connects to this server system to download the file. Although the client-server architecture is successful in many situations, it may not be ideal to rely on such a system to provide the streaming service as users may be required to register an account using personal information in order to use the service. This is troublesome if a user wishes to watch a movie simultaneously while interacting with a friend in another part of the world over the Internet. In this paper, we describe a new real-time media streaming application implemented on a peer-to-peer (P2P) architecture in order to overcome these challenges within a mobile environment. When using the peer-to-peer architecture, streaming media is shared directly between end-users, called peers, with minimal or no reliance on a dedicated server. Based on the proposed software pɛvμa (pronounced [revma]), named for the Greek word meaning stream, we can host a media file on any computer and directly stream it to a connected partner. To accomplish this, pɛvμa utilizes the Microsoft .NET Framework and Windows Presentation Framework, which are widely available on various types of windows-compatible personal computers and mobile devices. With specially designed multi-threaded algorithms, the application can stream HD video at speeds upwards of 20 Mbps using the User Datagram Protocol (UDP). Streaming and playback are handled using synchronized threads that communicate with one another once a connection is established. Alteration of playback, such as pausing playback or tracking to a

  4. Distributed continuous media streaming - Using redundant hierarchy (RED-Hi) servers

    OpenAIRE

    Shah, Mohammad Ahmed

    2014-01-01

    ABSTRACT: The first part of this thesis provides a survey of continuous media serves, including discussions on streaming protocols, models and techniques. In the second part, a novel distributed media streaming system is introduced. In order to manage the traffic in a fault tolerant and effective manner a hierarchical topology, so called redundant hierarchy (RED-Hi) is used. The proposed system works in three steps, namely, object location, path reservation and object delivery. Simulations ar...

  5. Ecophysiology of the Anammox Bacteria

    NARCIS (Netherlands)

    Kartal, M.B.

    2008-01-01

    Anaerobic ammonium oxidizing (anammox) bacteria oxidize ammonium to dinitrogen gas with nitrite as the electron acceptor. These bacteria are the key players in the global nitrogen cycle, responsible for the most of nitrogen production in natural ecosystems. The anammox process is also a

  6. Money and transmission of bacteria.

    NARCIS (Netherlands)

    Gedik, H.; Voss, T.A.; Voss, A.

    2013-01-01

    Money is one of the most frequently passed items in the world. The aim of this study was to ascertain the survival status of bacteria including Staphylococcus aureus, Escherichia coli, and Vancomycin- Resistant Enterococci (VRE) on banknotes from different countries and the transmission of bacteria

  7. Analysis of streaming media systems

    NARCIS (Netherlands)

    Lu, Y.

    2010-01-01

    Multimedia services have been popping up at tremendous speed in recent years. A large number of these multimedia streaming systems are introduced to the consumer market. Internet Service Providers, Telecommunications Operators, Service/Content Providers, and end users are interested in the

  8. Stretch-minimising stream surfaces

    KAUST Repository

    Barton, Michael; Kosinka, Jin; Calo, Victor M.

    2015-01-01

    We study the problem of finding stretch-minimising stream surfaces in a divergence-free vector field. These surfaces are generated by motions of seed curves that propagate through the field in a stretch minimising manner, i.e., they move without stretching or shrinking, preserving the length of their arbitrary arc. In general fields, such curves may not exist. How-ever, the divergence-free constraint gives rise to these 'stretch-free' curves that are locally arc-length preserving when infinitesimally propagated. Several families of stretch-free curves are identified and used as initial guesses for stream surface generation. These surfaces are subsequently globally optimised to obtain the best stretch-minimising stream surfaces in a given divergence-free vector field. Our algorithm was tested on benchmark datasets, proving its applicability to incompressible fluid flow simulations, where our stretch-minimising stream surfaces realistically reflect the flow of a flexible univariate object. © 2015 Elsevier Inc. All rights reserved.

  9. ALIENS IN WESTERN STREAM ECOSYSTEMS

    Science.gov (United States)

    The USEPA's Environmental Monitoring and Assessment Program conducted a five year probability sample of permanent mapped streams in 12 western US states. The study design enables us to determine the extent of selected riparian invasive plants, alien aquatic vertebrates, and some ...

  10. Stretch-minimising stream surfaces

    KAUST Repository

    Barton, Michael

    2015-05-01

    We study the problem of finding stretch-minimising stream surfaces in a divergence-free vector field. These surfaces are generated by motions of seed curves that propagate through the field in a stretch minimising manner, i.e., they move without stretching or shrinking, preserving the length of their arbitrary arc. In general fields, such curves may not exist. How-ever, the divergence-free constraint gives rise to these \\'stretch-free\\' curves that are locally arc-length preserving when infinitesimally propagated. Several families of stretch-free curves are identified and used as initial guesses for stream surface generation. These surfaces are subsequently globally optimised to obtain the best stretch-minimising stream surfaces in a given divergence-free vector field. Our algorithm was tested on benchmark datasets, proving its applicability to incompressible fluid flow simulations, where our stretch-minimising stream surfaces realistically reflect the flow of a flexible univariate object. © 2015 Elsevier Inc. All rights reserved.

  11. Nuclear reactor cavity streaming shield

    International Nuclear Information System (INIS)

    Klotz, R.J.; Stephen, D.W.

    1978-01-01

    The upper portion of a nuclear reactor vessel supported in a concrete reactor cavity has a structure mounted below the top of the vessel between the outer vessel wall and the reactor cavity wall which contains hydrogenous material which will attenuate radiation streaming upward between vessel and the reactor cavity wall while preventing pressure buildup during a loss of coolant accident

  12. Video Streaming in Online Learning

    Science.gov (United States)

    Hartsell, Taralynn; Yuen, Steve Chi-Yin

    2006-01-01

    The use of video in teaching and learning is a common practice in education today. As learning online becomes more of a common practice in education, streaming video and audio will play a bigger role in delivering course materials to online learners. This form of technology brings courses alive by allowing online learners to use their visual and…

  13. Continuous sampling from distributed streams

    DEFF Research Database (Denmark)

    Graham, Cormode; Muthukrishnan, S.; Yi, Ke

    2012-01-01

    A fundamental problem in data management is to draw and maintain a sample of a large data set, for approximate query answering, selectivity estimation, and query planning. With large, streaming data sets, this problem becomes particularly difficult when the data is shared across multiple distribu......A fundamental problem in data management is to draw and maintain a sample of a large data set, for approximate query answering, selectivity estimation, and query planning. With large, streaming data sets, this problem becomes particularly difficult when the data is shared across multiple...... distributed sites. The main challenge is to ensure that a sample is drawn uniformly across the union of the data while minimizing the communication needed to run the protocol on the evolving data. At the same time, it is also necessary to make the protocol lightweight, by keeping the space and time costs low...... for each participant. In this article, we present communication-efficient protocols for continuously maintaining a sample (both with and without replacement) from k distributed streams. These apply to the case when we want a sample from the full streams, and to the sliding window cases of only the W most...

  14. Doublet III neutral beam multi-stream command language system

    International Nuclear Information System (INIS)

    Campbell, L.; Garcia, J.R.

    1983-12-01

    A multi-stream command language system was developed to provide control of the dual source neutral beam injectors on the Doublet III experiment at GA Technologies Inc. The Neutral Beam command language system consists of three parts: compiler, sequencer, and interactive task. The command language, which was derived from the Doublet III tokamak command language, POPS, is compiled, using a recursive descent compiler, into reverse polish notation instructions which then can be executed by the sequencer task. The interactive task accepts operator commands via a keyboard. The interactive task directs the operation of three input streams, creating commands which are then executed by the sequencer. The streams correspond to the two sources within a Doublet III neutral beam, plus an interactive stream. The sequencer multiplexes the execution of instructions from these three streams. The instructions include reads and writes to an operator terminal, arithmetic computations, intrinsic functions such as CAMAC input and output, and logical instructions. The neutral beam command language system was implemented using Modular Computer Systems (ModComp) Pascal and consists of two tasks running on a ModComp Classic IV computer

  15. Doublet III neutral beam multi-stream command language system

    International Nuclear Information System (INIS)

    Campbell, L.; Garcia, J.R.

    1983-01-01

    A multi-stream command language system was developed to provide control of the dual source neutral beam injectors on the Doublet III experiment at GA Technologies Inc. The Neutral Beam command language system consists of three parts: compiler, sequencer, and interactive task. The command language, which was derived from the Doublet III tokamak command language, POPS, is compiled, using a recursive descent compiler, into reverse polish notation instructions which then can be executed by the sequencer task. The interactive task accepts operator commands via a keyboard. The interactive task directs the operation of three input streams, creating commands which are then executed by the sequencer. The streams correspond to the two sources within a Doublet III neutral beam, plus an interactive stream. The sequencer multiplexes the execution of instructions from these three streams. The instructions include reads and writes to an operator terminal, arithmetic computations, intrinsic functions such as CAMAC input and output, and logical instructions. The neutral beam command language system was implemented using Modular Computer Systems (ModComp) Pascal and consists of two tasks running on a ModComp Classic IV computer. The two tasks, the interactive and the sequencer, run independently and communicate using shared memory regions. The compiler runs as an overlay to the interactive task when so directed by operator commands. The system is succesfully being used to operate the three neutral beams on Doublet III

  16. Aeroacoustics of Three-Stream Jets

    Science.gov (United States)

    Henderson, Brenda S.

    2012-01-01

    Results from acoustic measurements of noise radiated from a heated, three-stream, co-annular exhaust system operated at subsonic conditions are presented. The experiments were conducted for a range of core, bypass, and tertiary stream temperatures and pressures. The nozzle system had a fan-to-core area ratio of 2.92 and a tertiary-to-core area ratio of 0.96. The impact of introducing a third stream on the radiated noise for third-stream velocities below that of the bypass stream was to reduce high frequency noise levels at broadside and peak jet-noise angles. Mid-frequency noise radiation at aft observation angles was impacted by the conditions of the third stream. The core velocity had the greatest impact on peak noise levels and the bypass-to-core mass flow ratio had a slight impact on levels in the peak jet-noise direction. The third-stream jet conditions had no impact on peak noise levels. Introduction of a third jet stream in the presence of a simulated forward-flight stream limits the impact of the third stream on radiated noise. For equivalent ideal thrust conditions, two-stream and three-stream jets can produce similar acoustic spectra although high-frequency noise levels tend to be lower for the three-stream jet.

  17. Streaming Visual Analytics Workshop Report

    Energy Technology Data Exchange (ETDEWEB)

    Cook, Kristin A. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Burtner, Edwin R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Kritzstein, Brian P. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Brisbois, Brooke R. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Mitson, Anna E. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)

    2016-03-31

    How can we best enable users to understand complex emerging events and make appropriate assessments from streaming data? This was the central question addressed at a three-day workshop on streaming visual analytics. This workshop was organized by Pacific Northwest National Laboratory for a government sponsor. It brought together forty researchers and subject matter experts from government, industry, and academia. This report summarizes the outcomes from that workshop. It describes elements of the vision for a streaming visual analytic environment and set of important research directions needed to achieve this vision. Streaming data analysis is in many ways the analysis and understanding of change. However, current visual analytics systems usually focus on static data collections, meaning that dynamically changing conditions are not appropriately addressed. The envisioned mixed-initiative streaming visual analytics environment creates a collaboration between the analyst and the system to support the analysis process. It raises the level of discourse from low-level data records to higher-level concepts. The system supports the analyst’s rapid orientation and reorientation as situations change. It provides an environment to support the analyst’s critical thinking. It infers tasks and interests based on the analyst’s interactions. The system works as both an assistant and a devil’s advocate, finding relevant data and alerts as well as considering alternative hypotheses. Finally, the system supports sharing of findings with others. Making such an environment a reality requires research in several areas. The workshop discussions focused on four broad areas: support for critical thinking, visual representation of change, mixed-initiative analysis, and the use of narratives for analysis and communication.

  18. METHODS FOR DETECTING BACTERIA USING POLYMER MATERIALS

    NARCIS (Netherlands)

    Van Grinsven Bart Robert, Nicolaas; Cleij, Thomas

    2017-01-01

    A method for characterizing bacteria includes passing a liquid containing an analyte comprising a first bacteria and a second bacteria over and in contact with a polymer material on a substrate. The polymer material is formulated to bind to the first bacteria, and the first bacteria binds to the

  19. A recirculating stream aquarium for ecological studies.

    Science.gov (United States)

    Gordon H. Reeves; Fred H. Everest; Carl E. McLemore

    1983-01-01

    Investigations of the ecological behavior of fishes often require studies in both natural and artificial stream environments. We describe a large, recirculating stream aquarium and its controls, constructed for ecological studies at the Forestry Sciences Laboratory in Corvallis.

  20. Comparison of active and passive stream restoration

    DEFF Research Database (Denmark)

    Kristensen, Esben Astrup; Thodsen, Hans; Dehli, Bjarke

    2013-01-01

    Modification and channelization of streams and rivers have been conducted extensively throughout the world during the past century. Subsequently, much effort has been directed at re-creating the lost habitats and thereby improving living conditions for aquatic organisms. However, as restoration...... methods are plentiful, it is difficult to determine which one to use to get the anticipated result. The aim of this study was to compare two commonly used methods in small Danish streams to improve the physical condition: re-meandering and passive restoration through cease of maintenance. Our...... investigation included measurement of the physical conditions in 29 stream reaches covering four different groups: (1) re-meandered streams, (2) LDC streams (the least disturbed streams available), (3) passively restored streams (>10 years stop of aintenance) and (4) channelized and non-restored streams. The in...

  1. A survey on Big Data Stream Mining

    African Journals Online (AJOL)

    pc

    2018-03-05

    Mar 5, 2018 ... huge amount of stream like telecommunication systems. So, there ... streams have many challenges for data mining algorithm design like using of ..... A. Bifet and R. Gavalda, "Learning from Time-Changing Data with. Adaptive ...

  2. Cytoplasmic Streaming in the Drosophila Oocyte.

    Science.gov (United States)

    Quinlan, Margot E

    2016-10-06

    Objects are commonly moved within the cell by either passive diffusion or active directed transport. A third possibility is advection, in which objects within the cytoplasm are moved with the flow of the cytoplasm. Bulk movement of the cytoplasm, or streaming, as required for advection, is more common in large cells than in small cells. For example, streaming is observed in elongated plant cells and the oocytes of several species. In the Drosophila oocyte, two stages of streaming are observed: relatively slow streaming during mid-oogenesis and streaming that is approximately ten times faster during late oogenesis. These flows are implicated in two processes: polarity establishment and mixing. In this review, I discuss the underlying mechanism of streaming, how slow and fast streaming are differentiated, and what we know about the physiological roles of the two types of streaming.

  3. Stream Tables and Watershed Geomorphology Education.

    Science.gov (United States)

    Lillquist, Karl D.; Kinner, Patricia W.

    2002-01-01

    Reviews copious stream tables and provides a watershed approach to stream table exercises. Results suggest that this approach to learning the concepts of fluvial geomorphology is effective. (Contains 39 references.) (DDR)

  4. Dating base flow in streams using dissolved gases and diurnal temperature changes

    Science.gov (United States)

    Sanford, Ward E.; Casile, Gerolamo C.; Haase, Karl B.

    2015-01-01

    A method is presented for using dissolved CFCs or SF6 to estimate the apparent age of stream base flow by indirectly estimating the mean concentration of the tracer in the inflowing groundwater. The mean value is estimated simultaneously with the mean residence times of the gas and water in the stream by sampling the stream for one or both age tracers, along with dissolved nitrogen and argon at a single location over a period of approximately 12–14 h. The data are fitted to an equation representing the temporal in-stream gas exchange as it responds to the diurnal temperature fluctuation. The efficacy of the method is demonstrated by collecting and analyzing samples at six different stream locations across parts of northern Virginia, USA. The studied streams drain watersheds with areas of between 2 and 122 km2 during periods when the diurnal stream temperature ranged between 2 and 5°C. The method has the advantage of estimating the mean groundwater residence time of discharge from the watershed to the stream without the need for the collection of groundwater infiltrating to streambeds or local groundwater sampled from shallow observation wells near the stream.

  5. A quasi-one-dimensional velocity regime of super-thermal electron stream propagation through the solar corona

    International Nuclear Information System (INIS)

    Levin, B.N.

    1984-01-01

    The propagation of an inhomogeneous stream of fast electrons through the corona - the type III radio burst source - is considered. It is shown, that the angular spectrum width of plasma waves excited by the stream is defined both by Landau damping by particles of the diffuse component and by damping (in the region of large phase velocities) by particles of the stream itself having large pitch angles. The regime of quasi-one-dimensional diffusion in the velocity space is realized only in the presence of a sufficiently dense diffuse component of super-thermal particles and only for a sufficiently large inhomogeneity scale of the stream. A large scale of the stream space profile is formed, evidently, close to the region of injection of super-thermal particles. It is the result of 'stripping' of part of the electrons from the stream front to its slower part due to essential non-one-dimensionality of the particle diffusion in velocity space. Results obtained may explain, in particular, the evolution of a stream particle angular spectrum in the generation region of type III radio bursts observed by spacecrafts (Lin et al., 1981). For the relatively low energetic part of the stream, the oblique plasma wave stabilization by a diffuse component results in a quasi-one-dimensional regime of diffusion. The latter conserves the beam-like structure of this part of the stream. (orig.)

  6. HPL and STREAM Benchmarks on SANAM Supercomputer

    KAUST Repository

    Bin Sulaiman, Riman A.

    2017-01-01

    SANAM supercomputer was jointly built by KACST and FIAS in 2012 ranking second that year in the Green500 list with a power efficiency of 2.3 GFLOPS/W (Rohr et al., 2014). It is a heterogeneous accelerator-based HPC system that has 300 compute nodes. Each node includes two Intel Xeon E5?2650 CPUs, two AMD FirePro S10000 dual GPUs and 128 GiB of main memory. In this work, the seven benchmarks of HPCC were installed and configured to reassess the performance of SANAM, as part of an unpublished master thesis, after it was reassembled in the Kingdom of Saudi Arabia. We present here detailed results of HPL and STREAM benchmarks.

  7. HPL and STREAM Benchmarks on SANAM Supercomputer

    KAUST Repository

    Bin Sulaiman, Riman A.

    2017-03-13

    SANAM supercomputer was jointly built by KACST and FIAS in 2012 ranking second that year in the Green500 list with a power efficiency of 2.3 GFLOPS/W (Rohr et al., 2014). It is a heterogeneous accelerator-based HPC system that has 300 compute nodes. Each node includes two Intel Xeon E5?2650 CPUs, two AMD FirePro S10000 dual GPUs and 128 GiB of main memory. In this work, the seven benchmarks of HPCC were installed and configured to reassess the performance of SANAM, as part of an unpublished master thesis, after it was reassembled in the Kingdom of Saudi Arabia. We present here detailed results of HPL and STREAM benchmarks.

  8. StreamNet; 1999 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Columbia River Inter-Tribal Fish Commission

    2000-01-01

    This report was funded by the Bonneville Power Administration (BPA), US Department of Energy, as part of BPA's program to protect, mitigate, and enhance fish and wildlife affected by the development and operation of hydroelectric facilities on the Columbia River and its tributaries. The views of this report are the author's and do not necessarily represent the views of BPA. This annual report covers progress made by: Columbia River Inter-Tribal Fish Commission Idaho; Department of Fish and Game; Montana Department of Fish, Wildlife and Parks; Oregon Department of Fish and Wildlife; Pacific States Marine Fisheries Commission; Shoshone-Bannock Tribes; US Fish and Wildlife Service; Washington Department of Fish and Wildlife; and FY1999 StreamNet Quickplan.

  9. Analysis of SRP waste streams for waste tank certification

    International Nuclear Information System (INIS)

    Coleman, C.J.

    1989-01-01

    The Savannah River Plant (SRP) will apply for certification from the State of South Carolina to operate the SRP High-Level Waste Tanks. The permit application will be submitted as a RCRA Part B, Volume 16, entitled ''RCRA Part B Application For the F and H-Area Radioactive Waste Farm.'' RCRA regulations require that influent and effluent streams of hazardous waste sites be characterized to obtain an operating permit. The Waste Management Technology Department requested ADD to determine 21 components (including pH and weight percent solids) in the current influent streams to SRP High-Level Waste Tanks. The analyses will be used to supplement existing data on the composition of High-Level Waste. Effluent streams, which will feed Saltstone and the DWPF, will be analyzed when they are produced. This report contains the data obtained from analyzing key influent streams to SRP High-Level Waste Tanks. The precision of the data and the analytical methods that were used are also discussed

  10. Impact of lateral flow on the transition from connected to disconnected stream-aquifer systems

    Science.gov (United States)

    Xian, Yang; Jin, Menggui; Liu, Yanfeng; Si, Aonan

    2017-05-01

    deep. Furthermore, in heterogeneous streambed systems, two or three pathways can simultaneously occur and various parts of the IWT occur at distinct positions relative to the IBSA. This challenges the commonly held assumption that streambed under a disconnected stream is always fully saturated, and limits the methods which introduce a negative or atmospheric pressure value at the IBSA to calculate seepage rate or assess stream-aquifer connectivity.

  11. Effect of teenage smoking on the prevalence of periodontal bacteria.

    Science.gov (United States)

    Heikkinen, Anna Maria; Pitkäniemi, Janne; Kari, Kirsti; Pajukanta, Riitta; Elonheimo, Outi; Koskenvuo, Markku; Meurman, Jukka H

    2012-04-01

    The aim of our study was to investigate how teenage smoking affects the prevalence of periodontal bacteria and periodontal health with the hypothesis that smoking increases the prevalence of the bacteria. Oral health of 264 adolescents (15- to 16-year-olds) was clinically examined, and their smoking history was recorded. The participants also filled in a structured questionnaire recording their general health and health habits. Pooled subgingival plaque samples were taken for polymerase chain reaction analysis of Aggregatibacter actinomycetemcomitans, Porphyromonas gingivalis, Tannerella forsythia, Prevotella intermedia, Prevotella nigrescens, and Treponema denticola. The prevalence of P. intermedia (21% vs. 4%, p = 0.01) and T. forsythia and T. denticola (23% vs. 8%, p periodontal bacteria were associated with higher periodontal index scores among all teenage smokers. Smoking girls harbored more frequently certain periodontal bacteria than non-smokers, but this was not seen in boys. Hence, our study hypothesis was only partly confirmed.

  12. Bacteria and protozoa in soil microhabitats as affected by earthworms

    DEFF Research Database (Denmark)

    Winding, Anne; Rønn, Regin; Hendriksen, Niels B.

    1997-01-01

    , were compared. The total, viable, and culturable number of bacteria, the metabolic potentials of bacterial populations, and the number of protozoa and nematodes were determined in soil size fractions. Significant differences between soil fractions were shown by all assays. The highest number......-cyano-2,3-ditolyl tetrazolim chloride (CTC)-reducing bacteria explained a major part of the variation in the number of protozoa. High protozoan activity and predation thus coincided with high bacterial activity. In soil with elm leaves, fungal growth is assumed to inhibit bacterial and protozoan...... activity. In soil with elm leaves and earthworms, earthworm activity led to increased culturability of bacteria, activity of protozoa, number of nematodes, changed metabolic potentials of the bacteria, and decreased differences in metabolic potentials between bacterial populations in the soil fractions...

  13. Why bacteria matter in animal development and evolution.

    Science.gov (United States)

    Fraune, Sebastian; Bosch, Thomas C G

    2010-07-01

    While largely studied because of their harmful effects on human health, there is growing appreciation that bacteria are important partners for invertebrates and vertebrates, including man. Epithelia in metazoans do not only select their microbiota; a coevolved consortium of microbes enables both invertebrates and vertebrates to expand the range of diet supply, to shape the complex immune system and to control pathogenic bacteria. Microbes in zebrafish and mice regulate gut epithelial homeostasis. In a squid, microbes control the development of the symbiotic light organ. These discoveries point to a key role for bacteria in any metazoan existence, and imply that beneficial bacteria-host interactions should be considered an integral part of development and evolution.

  14. Estimating stream discharge using stage and multi-level acoustic Doppler velocimetry

    DEFF Research Database (Denmark)

    Poulsen, Jane Bang; Rasmussen, Keld Rømer; Ovesen, Niels Bering

    than traditional stage-discharge methods. In this presentation we shall present results from a study where, at two sites in Denmark, the stream velocity field has been mapped by the use of three Acoustic Doppler Velocity Meter (ADVM) instruments. The ADVM instruments are mounted in three different......For temperate region countries with small or moderately sized streams, such as those in Denmark, seasonal weed growth imposes a significant temporal change of the stage-discharge relation. In the past such problems were often avoided by using hydraulic structures, however, firm ecology based...... in the Northern part of Europe may further violate a stable relation between stage and discharge in streams. Extreme high flow situations cause abrupt rise in stage, and consequently weed can be partly uprooted and partly bend down along the bed, thereby changing the conveyance of the stream. In addition, extreme...

  15. Intracellular bacteria: the origin of dinoflagellate toxicity.

    Science.gov (United States)

    Silva, E S

    1990-01-01

    Dinoflagellate blooms of the same species have been registered either as toxic or nontoxic and, in the latter case, toxicity may be of different types. A hypothesis has been formulated according to which the bacteria having in some way taken part in the toxin formation are either inside the dinoflagellate cell or in the nutritive liquid. The presence of intracellular bacteria in those microorganisms has been studied mainly in material from cultures, a few from the sea, and several strains were isolated from different species. Experiments with crossed inoculations have shown that the bacterial strain from Gonyaulax tamarensis caused the cells of some other species to become toxic. From nontoxic clonal cultures of Prorocentrum balticum, Glenodinium foliaceum, and Gyrodinium instriatum, after inoculation of that bacterial strain, cultures were obtained whose cell extracts showed the same kind of toxicity as G. tamarensis. No toxic action could be found in the extracts of the bacterial cells form the assayed strains. The interference of intracellular bacteria in the metabolism of dinoflagellates must be the main cause of their toxicity.

  16. Reconfigurable Multicore Architectures for Streaming Applications

    NARCIS (Netherlands)

    Smit, Gerardus Johannes Maria; Kokkeler, Andre B.J.; Rauwerda, G.K.; Jacobs, J.W.M.; Nicolescu, G.; Mosterman, P.J.

    2009-01-01

    This chapter addresses reconfigurable heterogenous and homogeneous multicore system-on-chip (SoC) platforms for streaming digital signal processing applications, also called DSP applications. In streaming DSP applications, computations can be specified as a data flow graph with streams of data items

  17. Stream dynamics: An overview for land managers

    Science.gov (United States)

    Burchard H. Heede

    1980-01-01

    Concepts of stream dynamics are demonstrated through discussion of processes and process indicators; theory is included only where helpful to explain concepts. Present knowledge allows only qualitative prediction of stream behavior. However, such predictions show how management actions will affect the stream and its environment.

  18. Energy from streaming current and potential

    NARCIS (Netherlands)

    Olthuis, Wouter; Schippers, Bob; Eijkel, Jan C.T.; van den Berg, Albert

    2005-01-01

    It is investigated how much energy can be delivered by a streaming current source. A streaming current and subsequent streaming potential originate when double layer charge is transported by hydrodynamic flow. Theory and a network model of such a source is presented and initial experimental results

  19. Maximizing Resource Utilization in Video Streaming Systems

    Science.gov (United States)

    Alsmirat, Mohammad Abdullah

    2013-01-01

    Video streaming has recently grown dramatically in popularity over the Internet, Cable TV, and wire-less networks. Because of the resource demanding nature of video streaming applications, maximizing resource utilization in any video streaming system is a key factor to increase the scalability and decrease the cost of the system. Resources to…

  20. Olefin Recovery from Chemical Industry Waste Streams

    Energy Technology Data Exchange (ETDEWEB)

    A.R. Da Costa; R. Daniels; A. Jariwala; Z. He; A. Morisato; I. Pinnau; J.G. Wijmans

    2003-11-21

    The objective of this project was to develop a membrane process to separate olefins from paraffins in waste gas streams as an alternative to flaring or distillation. Flaring these streams wastes their chemical feedstock value; distillation is energy and capital cost intensive, particularly for small waste streams.

  1. Review on SERS of Bacteria

    Directory of Open Access Journals (Sweden)

    Pamela A. Mosier-Boss

    2017-11-01

    Full Text Available Surface enhanced Raman spectroscopy (SERS has been widely used for chemical detection. Moreover, the inherent richness of the spectral data has made SERS attractive for use in detecting biological materials, including bacteria. This review discusses methods that have been used to obtain SERS spectra of bacteria. The kinds of SERS substrates employed to obtain SERS spectra are discussed as well as how bacteria interact with silver and gold nanoparticles. The roll of capping agents on Ag/Au NPs in obtaining SERS spectra is examined as well as the interpretation of the spectral data.

  2. Academic Self-Concepts in Ability Streams: Considering Domain Specificity and Same-Stream Peers

    Science.gov (United States)

    Liem, Gregory Arief D.; McInerney, Dennis M.; Yeung, Alexander S.

    2015-01-01

    The study examined the relations between academic achievement and self-concepts in a sample of 1,067 seventh-grade students from 3 core ability streams in Singapore secondary education. Although between-stream differences in achievement were large, between-stream differences in academic self-concepts were negligible. Within each stream, levels of…

  3. The long term response of stream flow to climatic warming in headwater streams of interior Alaska

    Science.gov (United States)

    Jeremy B. Jones; Amanda J. Rinehart

    2010-01-01

    Warming in the boreal forest of interior Alaska will have fundamental impacts on stream ecosystems through changes in stream hydrology resulting from upslope loss of permafrost, alteration of availability of soil moisture, and the distribution of vegetation. We examined stream flow in three headwater streams of the Caribou-Poker Creeks Research Watershed (CPCRW) in...

  4. Beer spoilage bacteria and hop resistance

    NARCIS (Netherlands)

    Sakamoto, K; Konings, WN

    2003-01-01

    For brewing industry, beer spoilage bacteria have been problematic for centuries. They include some lactic acid bacteria such as Lactobacillus brevis, Lactobacillus lindneri and Pediococcus damnosus, and some Gram-negative bacteria such as Pectinatus cerevisiiphilus, Pectinatus frisingensis and

  5. Electron transport chains of lactic acid bacteria

    NARCIS (Netherlands)

    Brooijmans, R.J.W.

    2008-01-01

    Lactic acid bacteria are generally considered facultative anaerobic obligate fermentative bacteria. They are unable to synthesize heme. Some lactic acid bacteria are unable to form menaquinone as well. Both these components are cofactors of respiratory (electron transport) chains of prokaryotic

  6. Bacteria-Targeting Nanoparticles for Managing Infections

    Science.gov (United States)

    Radovic-Moreno, Aleksandar Filip

    Bacterial infections continue to be a significant concern particularly in healthcare settings and in the developing world. Current challenges include the increasing spread of drug resistant (DR) organisms, the side effects of antibiotic therapy, the negative consequences of clearing the commensal bacterial flora, and difficulties in developing prophylactic vaccines. This thesis was an investigation of the potential of a class of polymeric nanoparticles (NP) to contribute to the management of bacterial infections. More specifically, steps were taken towards using these NPs (1) to achieve greater spatiotemporal control over drug therapy by more targeted antibiotic delivery to bacteria, and (2) to develop a prophylactic vaccine formulation against the common bacterial sexually transmitted disease (STD) caused by Chlamydia trachomatis. In the first part, we synthesized polymeric NPs containing poly(lactic-co-glycolic acid)-block-poly(L-histidine)-block-poly(ethylene glycol) (PLGA-PLH-PEG). We show that these NPs are able to bind to bacteria under model acidic infection conditions and are able to encapsulate and deliver vancomycin to inhibit the growth of Staphylococcus aureus bacteria in vitro. Further work showed that the PLGA-PLH-PEG-based NPs demonstrated the potential for competition for binding bacteria at a site of infection from soluble protein and model phagocytic and tissue-resident cells in a NP composition dependent manner. The NPs demonstrated low toxicity in vitro, were well tolerated by mice in vivo, and circulated in the blood on timescales comparable to control PLGA-PEG NPs. In the second part, we used PLGA-PLH-PEG-based NPs to design a prophylactic vaccine against the obligate intracellular bacterium Chlamydia trachomatis, the most common cause of bacterial STD in the world. Currently, no vaccines against this pathogen are approved for use in humans. We first formulated NPs encapsulating the TLR7 agonist R848 conjugated to poly(lactic acid) (R848-PLA

  7. STREAM: A First Programming Process

    DEFF Research Database (Denmark)

    Caspersen, Michael Edelgaard; Kölling, Michael

    2009-01-01

    to derive a programming process, STREAM, designed specifically for novices. STREAM is a carefully down-scaled version of a full and rich agile software engineering process particularly suited for novices learning object-oriented programming. In using it we hope to achieve two things: to help novice......Programming is recognized as one of seven grand challenges in computing education. Decades of research have shown that the major problems novices experience are composition-based—they may know what the individual programming language constructs are, but they do not know how to put them together....... Despite this fact, textbooks, educational practice, and programming education research hardly address the issue of teaching the skills needed for systematic development of programs. We provide a conceptual framework for incremental program development, called Stepwise Improvement, which unifies best...

  8. The significance of small streams

    Science.gov (United States)

    Wohl, Ellen

    2017-09-01

    Headwaters, defined here as first- and secondorder streams, make up 70%‒80% of the total channel length of river networks. These small streams exert a critical influence on downstream portions of the river network by: retaining or transmitting sediment and nutrients; providing habitat and refuge for diverse aquatic and riparian organisms; creating migration corridors; and governing connectivity at the watershed-scale. The upstream-most extent of the channel network and the longitudinal continuity and lateral extent of headwaters can be difficult to delineate, however, and people are less likely to recognize the importance of headwaters relative to other portions of a river network. Consequently, headwaters commonly lack the legal protections accorded to other portions of a river network and are more likely to be significantly altered or completely obliterated by land use.

  9. VT Priority Stream/River

    Data.gov (United States)

    Vermont Center for Geographic Information — Vermont List of Priority Surface Waters outside CWA Section 303(d) is divided in to 4 parts; Parts B, D, E and F. The four-part list has managed by the Vermont...

  10. Identifying and Further Understanding the Role of Bacteria and Archaea in a Basic Mine Drainage Remediation Site in Tanoma, PA

    Science.gov (United States)

    Sharp, G.; Mount, G.

    2017-12-01

    Acid mine drainage pollutes over 3000 miles of streams and ground water in Pennsylvania alone, and in response many solutions have been developed to counteract the effects of acidic mine drainage. It is estimated by USGS that restoring these watersheds would cost 5 billion-15 billion in total. As economic conditions place limits on expenditures, cost effective means of remediation will be of critical importance. One such method is passive bioremediation, and in the case of metal contamination, self-sustaining oxygenation. Our location of interest is the Tanoma Acid Mine Drainage engineered wetland near Tanoma, Pennsylvania. It is estimated that up to 5,000 gallons per minute is currently being discharged into the site. While most local remediation sites are acidic (pH bioremediation in more neutral pH setting (pH of 5.5-7.5). In this study, we look to further understand biologic, chemical, and hydrologic controls that contribute to the efficiency of the wetland. Our research will focus on the spatial and temporal distribution of biomass through the wetland system as well as changes in water and soil chemistry. Local biofilm (Leptothrix discophora ) are an important part of the remediation process, using iron from the water as an energy source. The bacteria reduce the iron content of the water, precipitating it onto the pond bed as Terraced Iron Formations (TIF). Terraces iron formations (TIF's) are correlated with localized biofilm-archaea densities where archaea thrive in iron rich sediments. By determining bacteria densities in the wetland through gram stain analysis, we can further understand their role in terraced iron formation creation, find localized TIF's that occur, and correlate methane production due to archaea in that location. Mapping TIF locations and identifying bacteria densities will help determine the bioremediation effects on the overall efficiency of iron reduction throughout the Tanoma AMD passive remediation system.

  11. Magnetotactic Bacteria from Extreme Environments

    Directory of Open Access Journals (Sweden)

    Christopher T. Lefèvre

    2013-03-01

    Full Text Available Magnetotactic bacteria (MTB represent a diverse collection of motile prokaryotes that biomineralize intracellular, membrane-bounded, tens-of-nanometer-sized crystals of a magnetic mineral called magnetosomes. Magnetosome minerals consist of either magnetite (Fe3O4 or greigite (Fe3S4 and cause cells to align along the Earth’s geomagnetic field lines as they swim, a trait called magnetotaxis. MTB are known to mainly inhabit the oxic–anoxic interface (OAI in water columns or sediments of aquatic habitats and it is currently thought that magnetosomes function as a means of making chemotaxis more efficient in locating and maintaining an optimal position for growth and survival at the OAI. Known cultured and uncultured MTB are phylogenetically associated with the Alpha-, Gamma- and Deltaproteobacteria classes of the phylum Proteobacteria, the Nitrospirae phylum and the candidate division OP3, part of the Planctomycetes-Verrucomicrobia-Chlamydiae (PVC bacterial superphylum. MTB are generally thought to be ubiquitous in aquatic environments as they are cosmopolitan in distribution and have been found in every continent although for years MTB were thought to be restricted to habitats with pH values near neutral and at ambient temperature. Recently, however, moderate thermophilic and alkaliphilic MTB have been described including: an uncultured, moderately thermophilic magnetotactic bacterium present in hot springs in northern Nevada with a probable upper growth limit of about 63 °C; and several strains of obligately alkaliphilic MTB isolated in pure culture from different aquatic habitats in California, including the hypersaline, extremely alkaline Mono Lake, with an optimal growth pH of >9.0.

  12. Interplanetary stream magnetism: Kinematic effects

    International Nuclear Information System (INIS)

    Burlaga, L.F.; Barouch, E.

    1976-01-01

    The particle density, and the magnetic field intensity and direction, are calculated for volume elements of the solar wind as a function of the initial magnetic field direction, Phi 0 , and the initial speed gradient, (deltaV/deltaR) 0 . It is assumed that the velocity is constant and radial. These assumptions are approximately valid between approx.0.1 and 1.0 AU for many streams. Time profiles of n, B, and V are calculated for corotating streams, neglecting effects of pressure gradients. The compression and rarefaction of B depend sensitively on Phi 0 . By averaging over a typical stream, it is found that approx.r -2 , whereas does not vary in a simple way, consistent with deep space observations. Changes of field direction may be very large, depending on the initial angle; but when the initial angle at 0.1 Au is such that the base of the field line corotates with the Sun, the spiral angle is the preferred direction at 1 AU. The theory is also applicable to nonstationary flows

  13. StreamStats, version 4

    Science.gov (United States)

    Ries, Kernell G.; Newson, Jeremy K.; Smith, Martyn J.; Guthrie, John D.; Steeves, Peter A.; Haluska, Tana L.; Kolb, Katharine R.; Thompson, Ryan F.; Santoro, Richard D.; Vraga, Hans W.

    2017-10-30

    IntroductionStreamStats version 4, available at https://streamstats.usgs.gov, is a map-based web application that provides an assortment of analytical tools that are useful for water-resources planning and management, and engineering purposes. Developed by the U.S. Geological Survey (USGS), the primary purpose of StreamStats is to provide estimates of streamflow statistics for user-selected ungaged sites on streams and for USGS streamgages, which are locations where streamflow data are collected.Streamflow statistics, such as the 1-percent flood, the mean flow, and the 7-day 10-year low flow, are used by engineers, land managers, biologists, and many others to help guide decisions in their everyday work. For example, estimates of the 1-percent flood (which is exceeded, on average, once in 100 years and has a 1-percent chance of exceedance in any year) are used to create flood-plain maps that form the basis for setting insurance rates and land-use zoning. This and other streamflow statistics also are used for dam, bridge, and culvert design; water-supply planning and management; permitting of water withdrawals and wastewater and industrial discharges; hydropower facility design and regulation; and setting of minimum allowed streamflows to protect freshwater ecosystems. Streamflow statistics can be computed from available data at USGS streamgages depending on the type of data collected at the stations. Most often, however, streamflow statistics are needed at ungaged sites, where no streamflow data are available to determine the statistics.

  14. Streaming potential of superhydrophobic microchannels.

    Science.gov (United States)

    Park, Hung Mok; Kim, Damoa; Kim, Se Young

    2017-03-01

    For the purpose of gaining larger streaming potential, it has been suggested to employ superhydrophobic microchannels with a large velocity slip. There are two kinds of superhydrophobic surfaces, one having a smooth wall with a large Navier slip coefficient caused by the hydrophobicity of the wall material, and the other having a periodic array of no- shear slots of air pockets embedded in a nonslip wall. The electrokinetic flows over these two superhydrophobic surfaces are modelled using the Navier-Stokes equation and convection-diffusion equations of the ionic species. The Navier slip coefficient of the first kind surfaces and the no-shear slot ratio of the second kind surfaces are similar in the sense that the volumetric flow rate increases as these parameter values increase. However, although the streaming potential increases monotonically with respect to the Navier slip coefficient, it reaches a maximum and afterward decreases as the no-shear ratio increases. The results of the present investigation imply that the characterization of superhydrophobic surfaces employing only the measurement of volumetric flow rate against pressure drop is not appropriate and the fine structure of the superhydrophobic surfaces must be verified before predicting the streaming potential and electrokinetic flows accurately. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  15. Economic evaluation of neutral streams and of river construction methods

    International Nuclear Information System (INIS)

    Donat, M.

    1998-12-01

    There are no current markets for the management and restoration of natural streams. However, economic elements tend to play an increasingly important role when it comes to decisions about river management activities. Although preference structures of market consumers can be analyzed using prices, there are several short-comings in using this technique for goods with no or an insufficient market. This is especially true for 'natural streams'. The non-existence of market prices for goods or their parts does not mean that they do not have a value or that there is no preference structure for them. After an introductory discussion of ethical and value issues, specific methods for evaluating and analyzing the willingness-to-pay for natural streams and theirs restoration are developed further. Using direct interview techniques, locals in three different watersheds in Upper Austria are ask for their preferences and social pricing of natural streams and river management options. The areas the interviews were conducted in, represent a watershed dominated by intensive agricultural and residential uses, another watershed typical for a rural community and a third representing a watershed of a relatively pristine river of the Northern Alpine limestone range mainly used by forestry and tourism. Demographic data, eco-morphological stream characteristics and preferences of the interviewed about elements of a natural stream, user and non-user values were linked and analyzed. The results of a personal interviewing technique conducted in these watersheds showed to be capable to capture the preference structure in small watersheds and may offer some help for decision-making concerning river management issues. (author)

  16. Gut Bacteria Affect Immunotherapy Response

    Science.gov (United States)

    Three new studies have identified intestinal bacteria that appear to influence the response to checkpoint inhibitors. This Cancer Currents blog post explains how the researchers think their findings could be used to improve patients’ responses to these immunotherapy drugs.

  17. hydroxyalkanoate (PHAs) producing bacteria isolated

    African Journals Online (AJOL)

    SERVER

    2007-07-04

    Jul 4, 2007 ... ium (MSM), having inhibitors for Gram positive bacteria and fungi and a mixed ... Two techniques were used for detecting the presence of polymer: staining ... was saline solution at 600 nm wavelength on VARIAN DSM 100.

  18. Characterizing relationships among fecal indicator bacteria ...

    Science.gov (United States)

    Bed sediments of streams and rivers may store high concentrations of fecal indicator bacteria (FIB) and pathogens. Due to resuspension events, these contaminants can be mobilized into the water column and affect overall water quality. Other bacterial indicators such as microbial source tracking (MST) markers, developed to determine potential sources of fecal contamination, can also be resuspended from bed sediments. The primary objective of this study was to predict occurrence of waterborne pathogens in water and streambed sediments using a simple statistical model that includes traditionally measured FIB, environmental parameters and source allocation, using MST markers as predictor variables. Synoptic sampling events were conducted during baseflow conditions downstream from agricultural (AG), forested (FORS), and wastewater pollution control plant (WPCP) land uses. Concentrations of FIB and MST markers were measured in water and sediments, along with occurrences of the enteric pathogens Campylobacter, Listeria and Salmonella, and the virulence gene that carries Shiga toxin, stx2. Pathogens were detected in water more often than in underlying sediments. Shiga toxin was significantly related to land use, with concentrations of the ruminant marker selected as an independent variable that could correctly classify 76% and 64% of observed Shiga toxin occurrences in water and sediment, respectively. FIB concentrations and water quality parameters were also selected a

  19. Spectrochemical determination of beryllium and lithium in stream sediments

    International Nuclear Information System (INIS)

    Gallimore, D.L.; Hues, A.D.; Palmer, B.A.; Cox, L.E.; Simi, O.R.; Bieniewski, T.M.; Steinhaus, D.W.

    1979-11-01

    A spectrochemical method was developed to analyze 200 or more samples of stream sediments per day for beryllium and lithium. One part of ground stream sediment is mixed with two parts graphite-SiO 2 buffer, packed into a graphite electrode, and excited in a direct-current arc. The resulting emission goes to a 3.4-m, direct-reading, Ebert spectrograph. A desk-top computer system is used to record and process the signals, and to report the beryllium and lithium concentrations. The limits of detection are 0.2 μg/g for beryllium and 0.5 μg/g for lithium. For analyses of prepared reference materials, the relative standard deviations were 16% for determining 0.2 to 100 μg/g of beryllium and 15% for determining 0.5 to 500 μg/g of lithium. A correction is made for vanadium interference

  20. Thymidine kinase diversity in bacteria

    DEFF Research Database (Denmark)

    Sandrini, Michael; Clausen, A.R.; Munch-Petersen, B.

    2006-01-01

    Thymidine kinases (TKs) appear to be almost ubiquitous and are found in nearly all prokaryotes, eukaryotes, and several viruses. They are the key enzymes in thymidine salvage and activation of several anti-cancer and antiviral drugs. We show that bacterial TKs can be subdivided into 2 groups. The....... The TKs from Gram-positive bacteria are more closely related to the eukaryotic TK1 enzymes than are TKs from Gram-negative bacteria....

  1. Anaerobic bacteria that dechlorinate perchloroethene.

    Science.gov (United States)

    Fathepure, B Z; Nengu, J P; Boyd, S A

    1987-01-01

    In this study, we identified specific cultures of anaerobic bacteria that dechlorinate perchlorethene (PCE). The bacteria that significantly dechlorinated PCE were strain DCB-1, an obligate anaerobe previously shown to dechlorinate chlorobenzoate, and two strains of Methanosarcina. The rate of PCE dechlorination by DCB-1 compared favorably with reported rates of trichloroethene bio-oxidation by methanotrophs. Even higher PCE dechlorination rates were achieved when DCB-1 was grown in a methanogenic consortium. PMID:3426224

  2. Global perspectives on the urban stream syndrome

    Science.gov (United States)

    Roy, Allison; Booth, Derek B.; Capps, Krista A.; Smith, Benjamin

    2016-01-01

    Urban streams commonly express degraded physical, chemical, and biological conditions that have been collectively termed the “urban stream syndrome”. The description of the syndrome highlights the broad similarities among these streams relative to their less-impaired counterparts. Awareness of these commonalities has fostered rapid improvements in the management of urban stormwater for the protection of downstream watercourses, but the focus on the similarities among urban streams has obscured meaningful differences among them. Key drivers of stream responses to urbanization can vary greatly among climatological and physiographic regions of the globe, and the differences can be manifested in individual stream channels even through the homogenizing veneer of urban development. We provide examples of differences in natural hydrologic and geologic settings (within similar regions) that can result in different mechanisms of stream ecosystem response to urbanization and, as such, should lead to different management approaches. The idea that all urban streams can be cured using the same treatment is simplistic, but overemphasizing the tremendous differences among natural (or human-altered) systems also can paralyze management. Thoughtful integration of work that recognizes the commonalities of the urban stream syndrome across the globe has benefitted urban stream management. Now we call for a more nuanced understanding of the regional, subregional, and local attributes of any given urban stream and its watershed to advance the physical, chemical, and ecological recovery of these systems.

  3. Low field orientation magnetic separation methods for magnetotactic bacteria

    International Nuclear Information System (INIS)

    Moeschler, F.D.

    1999-01-01

    Microbial biomineralisation of iron often results in a biomass that is magnetic and can be separated from water systems by the application of a magnetic field. Magnetotactic bacteria form magnetic membrane bound crystals within their structure, generally of magnetite. In nature, this enables magnetotactic bacteria to orientate themselves with respect to the local geomagnetic field. The bacteria then migrate with flagellar driven motion towards their preferred environment. This property has been harnessed to produce a process in which metal loaded magnetotactic bacteria can be recovered from a waste stream. This process is known as orientation magnetic separation. Several methods exist which permit the unique magnetic properties of individual magnetotactic bacteria to be studied, such as U-turn analysis, transmission electron microscopy and single wire cell studies. In this work an extension of U-turn analysis was developed. The bacteria were rendered non-motile by the addition of specific metal ions and the resulting 'flip time' which occurs during a field reversal enabled the magnetic moment of individual bacteria to be determined. This method proved to be much faster and more accurate than previous methods. For a successful process to be developed, large scale culturing of magnetotactic bacteria is required Experiments showed that culture vessel geometry was an important factor for high-density growth. Despite intensive studies reproducible culturing at volumes exceeding one litre was not achieved. This work showed that numerous metal ions rendered magnetotactic bacteria non-motile at concentrations below 10 ppm. Sequential adaptation raised typical levels to in excess of 100 ppm for a number of ions. such as zinc and tin. However, specific ions. such as copper or nickel, remained motility inhibiting at lower concentrations. To achieve separation using orientation magnetic separation, motile, field susceptible MTB are required. Despite successful adaptation, the

  4. Whole ecosystem approaches for assessing the coupling of N and P cycles in small streams

    Science.gov (United States)

    Schade, J. D.; Thomas, S. A.; Seybold, E. C.; Drake, T.; Lewis, K.; MacNeill, K.; Zimov, N.

    2010-12-01

    The most pressing environmental problems faced by society are manifestations of changes in biogeochemical cycles. The urgency of mitigating these problems has brought into sharp focus the need for a stronger mechanistic understanding of the factors that control biogeochemical cycles and how these factors affect multiple elements. Our overarching goal is to assess the strength of coupling between carbon, nitrogen, and phosphorus cycles in small headwater streams, including streams draining small watersheds in Northern California and the East Siberian Arctic. We have used a range of whole ecosystem approaches, rooted in nutrient spiraling theory, including plateau and pulsed nutrient enrichment experiments at a range of N:P ratios in heterotrophic and autotrophic streams. We use these experiments to calculate changes in nutrient spiraling metrics in response to changes in absolute and relative supply of N and P, and we use these results to infer the strength of the linkage between N and P cycles. In all California study streams, ecological processes are N limited, and we have observed significant changes in the strength of N and P coupling depending on position along the stream network. In small heterotrophic streams, addition of N caused significant increases in P uptake, while P had little influence on N. In larger autotrophic streams, N and P were only weakly coupled, which we attributed to a shift towards dominance of uptake by algae rather than heterotrophic bacteria, which is associated with differences in cellular structures. In addition, we have observed a small but consistent reduction in P uptake at high N:P of supply in autotrophic streams, which we speculate may indicate a suppression of N fixers at high N supply. In the Arctic, we have observed less consistency in the response of streams to nutrient enrichment, with some streams showing very little change in N or P uptake with changes in supply N:P, and others showing a decrease in N uptake in response

  5. Role of biofilms in sorptive removal of steroidal hormones and 4-nonylphenol compounds from streams

    Science.gov (United States)

    Writer, Jeffrey H.; Ryan, Joseph N.; Barber, Larry B.

    2011-01-01

    Stream biofilms play an important role in geochemical processing of organic matter and nutrients, however, the significance of this matrix in sorbing trace organic contaminants is less understood. This study focused on the role of stream biofilms in sorbing steroidal hormones and 4-nonylphenol compounds from surface waters using biofilms colonized in situ on artificial substrata and subsequently transferred to the laboratory for controlled batch sorption experiments. Steroidal hormones and 4-nonylphenol compounds readily sorb to stream biofilms as indicated by organic matter partition coefficients (Kom, L kg–1) for 17β-estradiol (102.5–2.8 L kg–1), 17α-ethynylestradiol (102.5–2.9 L kg–1), 4-nonylphenol (103.4–4.6 L kg–1), 4-nonylphenolmonoethoxylate (103.5–4.0 L kg–1), and 4-nonylphenoldiethoxylate (103.9–4.3 L kg–1). Experiments using water quality differences to induce changes in the relative composition of periphyton and heterotrophic bacteria in the stream biofilm did not significantly affect the sorptive properties of the stream biofilm, providing additional evidence that stream biofilms will sorb trace organic compounds under of variety of environmental conditions. Because sorption of the target compounds to stream biofilms was linearly correlated with organic matter content, hydrophobic partition into organic matter appears to be the dominant mechanism. An analysis of 17β-estradiol and 4-nonylphenol hydrophobic partition into water, biofilm, sediment, and dissolved organic matter matrices at mass/volume ratios typical of smaller rivers showed that the relative importance of the stream biofilm as a sorptive matrix was comparable to bed sediments. Therefore, stream biofilms play a primary role in attenuating these compounds in surface waters. Because the stream biofilm represents the base of the stream ecosystem, accumulation of steroidal hormones and 4-nonylphenol compounds in the stream biofilm may be an exposure pathway for

  6. Antibacterial Activities of Endophytic Bacteria Isolated from Taxus brevifolia Against Foodborne Pathogenic Bacteria.

    Science.gov (United States)

    Islam, Nurul; Choi, Jaehyuk; Baek, Kwang-Hyun

    2018-05-01

    Endophytes are a potential source of novel bioactive compounds with medicinal properties. In this study, 41 endophytic bacteria (EB) were isolated from tissues of a medicinally important plant Taxus brevifolia (Pacific yew). The objective was to screen all the EB isolates for their antibacterial effects against five foodborne pathogenic bacteria: Bacillus cereus ATCC10876, Staphylococcus aureus ATCC12600, Listeria monocytogenes ATCC19115, Escherichia coli ATCC43890, and Salmonella Typhimurium ATCC19585. Among the EB isolates, T. brevifolia seed (TbS)-8, T. brevifolia fleshy part of fruit (TbFl)-10, T. brevifolia leaf (TbL)-22, TbS-29, and TbL-34 exerted significant antibacterial activity against the tested foodborne pathogens. Especially TbFl-10 showed the highest antibacterial activity against all the tested bacteria and was identified as Paenibacillus kribbensis (Pk). Furthermore, an ethyl acetate extract of Pk-TbFl-10 possessed antibacterial activities against the tested five foodborne pathogenic bacteria, with zones of inhibition from 15.71 ± 2.85 to 13.01 ± 2.12 mm. Scanning electron microscopy analysis revealed ruptured, lysed, shrunk, and swollen cells of all the tested foodborne pathogens treated with the ethyl acetate extract of Pk-TbFl-10, suggesting that a metabolite(s) of Pk-TbFl-10 penetrates the cell membrane and causes cell lysis leading to cell death. Our results indicate that Pk-TbFl-10 isolated from T. brevifolia can serve as a novel source of natural antibacterial agents against foodborne pathogenic bacteria, with potential applications in the pharmaceutical industry.

  7. Effect of inorganic nutrients on relative contributions of fungi and bacteria to carbon flow from submerged decomposing leaf litter

    Science.gov (United States)

    Vladislav Gulis; Keller Suberkropp

    2003-01-01

    The relative contributions of fungi and bacteria to carbon flow from submerged decaying plant litter at different levels of inorganic nutrients (N and P) were studied. We estimated leaf mass loss, fungal and bacterial biomass and production, and microbial respiration and constructed partial carbon budgets for red maple leaf disks precolonized in a stream and then...

  8. Determination of Ammonia Oxidizing Bacteria and Nitrate Oxidizing Bacteria in Wastewater and Bioreactors

    Science.gov (United States)

    Francis, Somilez Asya

    2014-01-01

    The process of water purification has many different physical, chemical, and biological processes. One part of the biological process is the task of ammonia oxidizing bacteria (AOB) and nitrite oxidizing bacteria (NOB). Both play critical roles in the treatment of wastewater by oxidizing toxic compounds. The broad term is nitrification, a naturally occurring process that is carried out by AOB and NOB by using oxidation to convert ammonia to nitrite and nitrite to nitrate. To monitor this biological activity, bacterial staining was performed on wastewater contained in inoculum tanks and biofilm samples from bioreactors. Using microscopy and qPCR, the purpose of this experiment was to determine if the population of AOB and NOB in wastewater and membrane bioreactors changed depending on temperature and hibernation conditions to determine the optimal parameters for AOB/NOB culture to effectively clean wastewater.

  9. Evaluation of stream chemistry trends in US Geological Survey reference watersheds, 1970-2010.

    Science.gov (United States)

    Mast, M Alisa

    2013-11-01

    The Hydrologic Benchmark Network (HBN) is a long-term monitoring program established by the US Geological Survey in the 1960s to track changes in the streamflow and stream chemistry in undeveloped watersheds across the USA. Trends in stream chemistry were tested at 15 HBN stations over two periods (1970-2010 and 1990-2010) using the parametric Load Estimator (LOADEST) model and the nonparametric seasonal Kendall test. Trends in annual streamflow and precipitation chemistry also were tested to help identify likely drivers of changes in stream chemistry. At stations in the northeastern USA, there were significant declines in stream sulfate, which were consistent with declines in sulfate deposition resulting from the reductions in SO₂ emissions mandated under the Clean Air Act Amendments. Sulfate declines in stream water were smaller than declines in deposition suggesting sulfate may be accumulating in watershed soils and thereby delaying the stream response to improvements in deposition. Trends in stream chemistry at stations in other part of the country generally were attributed to climate variability or land disturbance. Despite declines in sulfate deposition, increasing stream sulfate was observed at several stations and appeared to be linked to periods of drought or declining streamflow. Falling water tables might have enhanced oxidation of organic matter in wetlands or pyrite in mineralized bedrock thereby increasing sulfate export in surface water. Increasing sulfate and nitrate at a station in the western USA were attributed to release of soluble salts and nutrients from soils following a large wildfire in the watershed.

  10. Evaluation of stream chemistry trends in US Geological Survey reference watersheds, 1970-2010

    Science.gov (United States)

    Mast, M. Alisa

    2013-01-01

    The Hydrologic Benchmark Network (HBN) is a long-term monitoring program established by the US Geological Survey in the 1960s to track changes in the streamflow and stream chemistry in undeveloped watersheds across the USA. Trends in stream chemistry were tested at 15 HBN stations over two periods (1970–2010 and 1990–2010) using the parametric Load Estimator (LOADEST) model and the nonparametric seasonal Kendall test. Trends in annual streamflow and precipitation chemistry also were tested to help identify likely drivers of changes in stream chemistry. At stations in the northeastern USA, there were significant declines in stream sulfate, which were consistent with declines in sulfate deposition resulting from the reductions in SO2 emissions mandated under the Clean Air Act Amendments. Sulfate declines in stream water were smaller than declines in deposition suggesting sulfate may be accumulating in watershed soils and thereby delaying the stream response to improvements in deposition. Trends in stream chemistry at stations in other part of the country generally were attributed to climate variability or land disturbance. Despite declines in sulfate deposition, increasing stream sulfate was observed at several stations and appeared to be linked to periods of drought or declining streamflow. Falling water tables might have enhanced oxidation of organic matter in wetlands or pyrite in mineralized bedrock thereby increasing sulfate export in surface water. Increasing sulfate and nitrate at a station in the western USA were attributed to release of soluble salts and nutrients from soils following a large wildfire in the watershed.

  11. Juvenile coho salmon growth and health in streams across an urbanization gradient

    Science.gov (United States)

    Spanjer, Andrew R.; Moran, Patrick W.; Larsen, Kimberly; Wetzel, Lisa; Hansen, Adam G.; Beauchamp, David A.

    2018-01-01

    Expanding human population and urbanization alters freshwater systems through structural changes to habitat, temperature effects from increased runoff and reduced canopy cover, altered flows, and increased toxicants. Current stream assessments stop short of measuring health or condition of species utilizing these freshwater habitats and fail to link specific stressors mechanistically to the health of organisms in the stream. Juvenile fish growth integrates both external and internal conditions providing a useful indicator of habitat quality and ecosystem health. Thus, there is a need to account for ecological and environmental influences on fish growth accurately. Bioenergetics models can simulate changes in growth and consumption in response to environmental conditions and food availability to account for interactions between an organism's environmental experience and utilization of available resources. The bioenergetics approach accounts for how thermal regime, food supply, and food quality affect fish growth. This study used a bioenergetics modeling approach to evaluate the environmental factors influencing juvenile coho salmon growth among ten Pacific Northwest streams spanning an urban gradient. Urban streams tended to be warmer, have earlier emergence dates and stronger early season growth. However, fish in urban streams experienced increased stress through lower growth efficiencies, especially later in the summer as temperatures warmed, with as much as a 16.6% reduction when compared to fish from other streams. Bioenergetics modeling successfully characterized salmonid growth in small perennial streams as part of a more extensive monitoring program and provides a powerful assessment tool for characterizing mixed life-stage specific responses in urban streams.

  12. A synoptic survey of microbial respiration, organic matter decomposition, and carbon efflux in U.S. streams and rivers

    Science.gov (United States)

    We analyzed microbial respiration and ecoenzyme activities related to organic matter processing in 1879 streams and rivers across the continental US as part of the USEPA’s 2008-2009 National Rivers and Streams Assessment. Ecoenzymatic stoichiometry was used to construct models fo...

  13. Streaming Video Games: Copyright Infringement or Protected Speech?

    Directory of Open Access Journals (Sweden)

    Eirik Evert Elias Jungar

    2016-12-01

    Full Text Available Streaming video games, that is, live broadcasting playing video games on the internet, is incredibly popular. Millions tune into twitch.tv daily to watch eSport tournaments, their favourite streamer, and chat with other viewers. But all is not rosy in the world of streaming games. Recently, some game developers have aggressively exercised their copyright to, firstly, claim part of the streamers’ revenue, and secondly, control the context in which their game is shown. The article analyzes whether game developers have, and should have, such rights under EU copyright law. Reaching the conclusion that video game streams infringe the game developer’s right to communicate their works to the public, I argue that freedom of expression can and should be used to rein in their rights in certain cases. Subjecting the lawfulness of streams to game developers’ good will risks stifling the expressions of streamers. The streamers, their audience, and even the copyright holders, would be worse off for it.

  14. How do land-based salmonid farms affect stream ecology?

    International Nuclear Information System (INIS)

    Tello, A.; Corner, R.A.; Telfer, T.C.

    2010-01-01

    Increasing research is highlighting the fact that streams provide crucial ecosystem services through the biogeochemical and ecological processes they sustain. Freshwater land-based salmonid farms commonly discharge their effluents into low order, headwater streams, partly due to the fact that adequate freshwater resources for production are commonly found in undisturbed areas. We review the effects of salmonid farm effluents on different biological components of stream ecosystems. Relevant considerations related to the temporal and spatial scales of effluent discharge and ecological effects are discussed. These highlight the need to characterize the patterns of stressor discharge when assessing environmental impacts and designing ecological effects studies. The potential role of multiple stressors in disrupting ecosystem structure and function is discussed with an emphasis on aquaculture veterinary medicines. Further research on the effects of veterinary medicines using relevant exposure scenarios would significantly contribute to our understanding of their impact in relation to other effluent stressors. - This article reviews the effects of aquaculture effluents on stream ecosystems with an emphasis on veterinary medicines and the temporal patterns of effluent discharge.

  15. Experimental and numerical study of a flapping tidal stream generator

    Science.gov (United States)

    Kim, Jihoon; Le, Tuyen Quang; Ko, Jin Hwan; Sitorus, Patar Ebenezer; Tambunan, Indra Hartarto; Kang, Taesam

    2017-11-01

    The tidal stream turbine is one of the systems that extract kinetic energy from tidal stream, and there are several types of the tidal stream turbine depending on its operating motion. In this research, we conduct experimental and consecutive numerical analyses of a flapping tidal stream generator with a dual configuration flappers. An experimental analysis of a small-scale prototype is conducted in a towing tank, and a numerical analysis is conducted using two-dimensional computational fluid dynamics simulations with an in-house code. Through an experimental analysis conducted while varying these factors, a high applied load and a high input arm angle were found to be advantageous. In consecutive numerical investigations with the kinematics selected from the experiments, it was found that a rear-swing flapper contributes to the total amount of power more than a front-swing flapper with a distance of two times the chord length and with a 90-degree phase difference between the two. This research was a part of the project titled `R&D center for underwater construction robotics', funded by the Ministry of Oceans and Fisheries(MOF), Korea Institute of Marine Science & Technology Promotion(KIMST,PJT200539), and Pohang City in Korea.

  16. Challenging the myths: the mid-stream asset provider's view

    International Nuclear Information System (INIS)

    Findlay, R.

    1996-01-01

    The term 'mid-stream asset business' implies custom processing and gathering, meaning that a gas producer sells his gas at the wellhead, thereby transferring the business of gathering, processing and marketing of the gas and liquids to a third party. The concept is popular in the United States, but is not yet common in Canada. In Canada, producers own the gas gathering and processing systems. The mid-stream asset business was claimed to be more user friendly than the old custom processing business. Three myths about the mid-stream asset business were challenged: (1) all the risk is on the producer, the processor takes no risk, (2) the mid-stream asset business is an expensive means of financing further exploration, and (3) owning and operating gathering and processing facilities is an integral part of a producer's business. Arguments were brought forth to dispel these myths and to emphasize that a processor should be prepared to accept risks associated with the commodity, prices, production and operations. To be operationally effective, the producer's flexibility and strategic advantages must approach the same level as if he were the owner of the facility

  17. Video Streaming for Creative Writing at International Elementary School

    Directory of Open Access Journals (Sweden)

    Deni Darmawan

    2013-02-01

    Full Text Available This study aims at overcoming difficulty in learning language, both in Indonesian Language and English at international elementary school, especially in creative writing. Creative writing as part of human activity is creativity with language medium as prose (narrative, description, poem (old, new and modern, as well as drama (dialogue, role play, and sosio drama. Specific target to be achieved is the design of Video Streaming for all kinds of creative writing in the language of Indonesian and English. This investigation is a continuation of the previos investigation that has managed to make a video leaning in English for Math and Science as integrated learning to early class at international elementary school. The method used follow the principles of developmental reasearch. The firts stage is script writing video streaming through brainstorming with teachers, lecturers, teams of investigators Indonesia (UPI and Malaysia (USM. The second stage manuscript, making finalization Video Streaming, make the Web, media experts and creative writing material team investigators. The third stage, testing the Video Streaming, Web and dissemination of results into all the international elementary school in Indonesia and Malaysia.

  18. Modelling of stormwater infiltration for stream restoration. Beder (Aarhus) case study

    DEFF Research Database (Denmark)

    Locatelli, Luca; Bockhorn, Britta; Klint, K. E.

    to assess the impact of stormwater runoff infiltration on (1) the water balance; (2) stream flow of the local stream Hovedgrøften; and (3) the risk of polluting the primary aquifer. The hydrogeological model was developed in a deterministic groundwater model (MIKE SHE) which was coupled dynamically...... carried out by developing a hydrogeological model of the Beder area in Aarhus, Denmark. The model area is characterized by the presence of a secondary unconfined aquifer that partly contributes baseflow to the local streams and partly to recharge to the underlying primary aquifer. The model was applied...... to a hydrodynamic 1-D river model (MIKE 11). Geological data based on spear mapping, geophysical data and lithology from local boreholes were used to set up the geological model. Groundwater observation and stream flow measurements were used for model calibration and validation.Different scenarios were analyzed...

  19. A method for assay of special nuclear material in high level liquid waste streams

    International Nuclear Information System (INIS)

    Venkata Subramani, C.R.; Swaminathan, K.; Asuvathraman, R.; Kutty, K.V.G.

    2003-01-01

    The assay of special nuclear material in the high level liquid waste streams assumes importance as this is the first stage in the extraction cycle and considerable losses of plutonium could occur here. This stream contains all the fission products as also the minor actinides and hence normal nuclear techniques cannot be used without prior separation of the special nuclear material. This paper presents the preliminary results carried out using wavelength dispersive x-ray fluorescence as part of the developmental efforts to assay SNM in these streams by instrumental techniques. (author)

  20. Experimental investigation on streaming due to a gap between blanket modules in ITER

    International Nuclear Information System (INIS)

    Konno, Chikara; Maekawa, Fujio; Oyama, Yukio; Uno, Yoshitomo; Kasugai, Yoshimi; Maekawa, Hiroshi; Ikeda, Yujiro; Wada, Masayuki

    2000-01-01

    A gap streaming experiment was performed by using a D-T neutron source at FNS/JAERI as the ITER/EDA R and D Task T-218, in order to examine the streaming effects due to gap between shield blanket modules in ITER. The experiment had three phases. The first one defined neutron source characteristics (Source Characterization Experiment), the second (Experiment-l ) aimed at shield for welding part between shield blanket and back plate and the third (Experiment-2) focused on the influence that the gap between shield blanket modules would have on superconducting magnet. The effects of gap streaming were examined in detail experimentally. (author)

  1. Levels and treatment options for enteric and antibiotic resistant bacteria in sewage from Sisimiut, Greenland

    DEFF Research Database (Denmark)

    Jensen, Pernille Erland; Gunnarsdottir, Ragnhildur; Andersen, Henrik Rasmus

    2013-01-01

    Sewage treatment in Arctic towns is inadequate. Sewage contains pathogenic microorganisms, parasites, antibiotic resistant bacteria, and toxic compounds. Discharging of untreated sewage can thus have a negative effect on people’s health and the aquatic environment in the receiving water bodies....... Conventional treatment is challenging and expensive to implement in Arctic communities due to the cold climate and scattered population. In addition, advanced removal of nutrients may in many cases be overstated due to the low population density and large receiving water bodies. In this work we investigated......, the wastewater is very strong, suggesting a potential hygienic risk. In addition, a high fraction of antibiotic resistant bacteria and an increased toxicity in the sub-stream from the hospital, suggest that this stream contains toxic compounds, possibly antibiotic of nature that may affect the local Arctic...

  2. Human body may produce bacteria.

    Science.gov (United States)

    Salerian, Alen J

    2017-06-01

    "Human body may produce bacteria" proposes that human body may produce bacteria and represent an independent source of infections contrary to the current paradigm of infectious disorders proposed by Louis Pasteur in 1880. The following observations are consistent with this hypothesis: A. Bidirectional transformations of both living and nonliving things have been commonly observed in nature. B. Complex multicellular organisms harbor the necessary properties to produce bacteria (water, nitrogen and oxygen). C. Physical laws suggest any previously observed phenomenon or action will occur again (life began on earth; a non living thing). D. Animal muscle cells may generate energy (fermentation). E. Sterilized food products (i.e. boiled eggs), may produce bacteria and fungus under special conditions and without any exposure to foreign living cells. "Human body may produce bacteria" may challenge the current medical paradigm that views human infectious disorders as the exclusive causative byproducts of invading foreign cells. It may also introduce new avenues to treat infectious disorders. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Horizontal gene transfer between bacteria.

    Science.gov (United States)

    Heuer, Holger; Smalla, Kornelia

    2007-01-01

    Horizontal gene transfer (HGT) refers to the acquisition of foreign genes by organisms. The occurrence of HGT among bacteria in the environment is assumed to have implications in the risk assessment of genetically modified bacteria which are released into the environment. First, introduced genetic sequences from a genetically modified bacterium could be transferred to indigenous micro-organisms and alter their genome and subsequently their ecological niche. Second, the genetically modified bacterium released into the environment might capture mobile genetic elements (MGE) from indigenous micro-organisms which could extend its ecological potential. Thus, for a risk assessment it is important to understand the extent of HGT and genome plasticity of bacteria in the environment. This review summarizes the present state of knowledge on HGT between bacteria as a crucial mechanism contributing to bacterial adaptability and diversity. In view of the use of GM crops and microbes in agricultural settings, in this mini-review we focus particularly on the presence and role of MGE in soil and plant-associated bacteria and the factors affecting gene transfer.

  4. StreamStats in Oklahoma - Drainage-Basin Characteristics and Peak-Flow Frequency Statistics for Ungaged Streams

    Science.gov (United States)

    Smith, S. Jerrod; Esralew, Rachel A.

    2010-01-01

    drainage-basin outlet for the period 1961-1990, 10-85 channel slope (slope between points located at 10 percent and 85 percent of the longest flow-path length upstream from the outlet), and percent impervious area. The Oklahoma StreamStats application interacts with the National Streamflow Statistics database, which contains the peak-flow regression equations in a previously published report. Fourteen peak-flow (flood) frequency statistics are available for computation in the Oklahoma StreamStats application. These statistics include the peak flow at 2-, 5-, 10-, 25-, 50-, 100-, and 500-year recurrence intervals for rural, unregulated streams; and the peak flow at 2-, 5-, 10-, 25-, 50-, 100-, and 500-year recurrence intervals for rural streams that are regulated by Natural Resources Conservation Service floodwater retarding structures. Basin characteristics and streamflow statistics cannot be computed for locations in playa basins (mostly in the Oklahoma Panhandle) and along main stems of the largest river systems in the state, namely the Arkansas, Canadian, Cimarron, Neosho, Red, and Verdigris Rivers, because parts of the drainage areas extend outside of the processed hydrologic units.

  5. The distribution of copper in stream sediments in an anomalous stream near Steinkopf, Namaqualand

    International Nuclear Information System (INIS)

    De Bruin, D.

    1987-01-01

    Anomalous copper concentrations detected by the regional stream-sediment programme of the Geological Survey was investigated in a stream near Steinkopf, Namaqualand. A follow-up disclosed the presence of malachite mineralization. However, additional stream-sediment samples collected from the 'anomalous' stream revealed an erratic distribution of copper and also that the malachite mineralization had no direct effect on the copper distribution in the stream sediments. Low partial-extraction yields, together with X-ray diffraction analyses, indicated that dispersion is mainly mechanical and that the copper occurs as cations in the lattice of the biotite fraction of the stream sediments. (author). 8 refs., 5 figs., 1 tab

  6. The distribution of copper in stream sediments in an anomalous stream near Steinkopf, Namaqualand

    Energy Technology Data Exchange (ETDEWEB)

    De Bruin, D

    1987-01-01

    Anomalous copper concentrations detected by the regional stream-sediment programme of the Geological Survey was investigated in a stream near Steinkopf, Namaqualand. A follow-up disclosed the presence of malachite mineralization. However, additional stream-sediment samples collected from the 'anomalous' stream revealed an erratic distribution of copper and also that the malachite mineralization had no direct effect on the copper distribution in the stream sediments. Low partial-extraction yields, together with X-ray diffraction analyses, indicated that dispersion is mainly mechanical and that the copper occurs as cations in the lattice of the biotite fraction of the stream sediments. (author). 8 refs., 5 figs., 1 tab.

  7. Low-frequency variation of a zonally localized jet stream: Observation and theory

    International Nuclear Information System (INIS)

    Cai, M.

    1994-01-01

    The climatological mean circulation in the extratropics of the Northern Hemisphere is characterized by two zonally localized jet streams over the east coasts of the two major continents. The zonal inhomogeneity of the climatological mean circulation is believed to be a primary factor determining the geographical locations of the maximum activity centers of the atmospheric transients, such as storm tracks over the east coasts of the two major continents and frequent blocking episodes occurring over the central regions of the two oceans. The impact of the transients on the zonally localized jet streams is studied mostly in the linear dynamics framework in terms of so-called open-quotes feedbackclose quotes diagnosis. This study investigates nonlinear instability of a zonally localized jet stream. The emphasis is on the nonlinear adjustment of a zonally localized jet stream associated with the development of the transients via local instability. The adjustment of a zonally localized jet stream would naturally consists of two parts: One is the time-invariant part and the other is the transient part (temporal variation of the adjustment). In conjunction with the observation, the time-mean adjustment is part of the climatological mean flow and hence is open-quotes invisible.close quotes The transient part of the adjustment is evidenced by the changes of the jet streams in terms of both location and intensity. In this study, we tend to relate the transient part of the adjustment of the jet stream to the maximum activity centers of low-frequency variability. The underlying mechanisms that are responsible for the temporal variation of the adjustment will be investigated. The time-mean adjustment will be also studied to better understand the temporal variation of the adjustment

  8. Measuring surface-water loss in Honouliuli Stream near the ‘Ewa Shaft, O‘ahu, Hawai‘i

    Science.gov (United States)

    Rosa, Sarah N.

    2017-05-30

    The Honolulu Board of Water Supply is currently concerned with the possibility of bacteria in the pumped water of the ‘Ewa Shaft (State well 3-2202-21). Groundwater from the ‘Ewa Shaft could potentially be used to meet future potable water needs in the ‘Ewa area on the island of O‘ahu. The source of the bacteria in the pumped water is unknown, although previous studies indicate that surface water may be lost to the subsurface near the site. The ‘Ewa Shaft consists of a vertical shaft, started near the south bank of Honouliuli Stream at an altitude of about 161 feet, and two horizontal infiltration tunnels near sea level. The shaft extracts groundwater from near the top of the freshwater lens in the Waipahu-Waiawa aquifer system within the greater Pearl Harbor Aquifer Sector, a designated Water Management Area.The surface-water losses were evaluated with continuous groundwater-level data from the ‘Ewa Shaft and a nearby monitoring well, continuous stream-discharge data from U.S. Geological Survey streamflow-gaging station 16212490 (Honouliuli Stream at H-1 Freeway near Waipahu), and seepage-run measurements in Honouliuli Stream and its tributary. During storms, discharge at the Honouliuli Stream gaging station increases and groundwater levels at ‘Ewa Shaft and a nearby monitoring well also increase. The concurrent increase in water levels at ‘Ewa Shaft and the nearby monitoring well during storms indicates that regional groundwater-level changes related to increased recharge, reduced withdrawals (due to a decrease in demand during periods of rainfall), or both may be occurring; although these data do not preclude the possibility of local recharge from Honouliuli Stream. Discharge measurements from two seepage runs indicate that surface water in the immediate area adjacent to ‘Ewa Shaft infiltrates into the streambed and may later reach the groundwater system developed by the ‘Ewa Shaft. The estimated seepage loss rates in the vicinity of

  9. Aquatic pollution increases use of terrestrial prey subsidies by stream fish

    Science.gov (United States)

    Kraus, Johanna M.; Pomeranz, Justin F.; Todd, Andrew S.; Walters, David M.; Schmidt, Travis S.; Wanty, Richard B.

    2016-01-01

    Stream food webs are connected with their riparian zones through cross-ecosystem movements of energy and nutrients. The use and impact of terrestrial subsidies on aquatic consumers is determined in part by in situ biomass of aquatic prey. Thus, stressors such as aquatic pollutants that greatly reduce aquatic secondary production could increase the need for and reliance of stream consumers on terrestrial resource subsidies.

  10. Modelling stream aquifer seepage in an alluvial aquifer: an improved loosing-stream package for MODFLOW

    Science.gov (United States)

    Osman, Yassin Z.; Bruen, Michael P.

    2002-07-01

    Seepage from a stream, which partially penetrates an unconfined alluvial aquifer, is studied for the case when the water table falls below the streambed level. Inadequacies are identified in current modelling approaches to this situation. A simple and improved method of incorporating such seepage into groundwater models is presented. This considers the effect on seepage flow of suction in the unsaturated part of the aquifer below a disconnected stream and allows for the variation of seepage with water table fluctuations. The suggested technique is incorporated into the saturated code MODFLOW and is tested by comparing its predictions with those of a widely used variably saturated model, SWMS_2D simulating water flow and solute transport in two-dimensional variably saturated media. Comparisons are made of both seepage flows and local mounding of the water table. The suggested technique compares very well with the results of variably saturated model simulations. Most currently used approaches are shown to underestimate the seepage and associated local water table mounding, sometimes substantially. The proposed method is simple, easy to implement and requires only a small amount of additional data about the aquifer hydraulic properties.

  11. BLOSTREAM: A HIGH SPEED STREAM CIPHER

    Directory of Open Access Journals (Sweden)

    ALI H. KASHMAR

    2017-04-01

    Full Text Available Although stream ciphers are widely utilized to encrypt sensitive data at fast speeds, security concerns have led to a shift from stream to block ciphers, judging that the current technology in stream cipher is inferior to the technology of block ciphers. This paper presents the design of an improved efficient and secure stream cipher called Blostream, which is more secure than conventional stream ciphers that use XOR for mixing. The proposed cipher comprises two major components: the Pseudo Random Number Generator (PRNG using the Rabbit algorithm and a nonlinear invertible round function (combiner for encryption and decryption. We evaluate its performance in terms of implementation and security, presenting advantages and disadvantages, comparison of the proposed cipher with similar systems and a statistical test for randomness. The analysis shows that the proposed cipher is more efficient, high speed, and secure than current conventional stream ciphers.

  12. Removal of sulfur from process streams

    International Nuclear Information System (INIS)

    Brignac, D.G.

    1984-01-01

    A process wherein water is added to a non-reactive gas stream, preferably a hydrogen or hydrogen-containing gas stream, sufficient to raise the water level thereof to from about 0.2 percent to about 50 percent, based on the total volume of the process gas stream, and the said moist gas stream is contacted, at elevated temperature, with a particulate mass of a sulfur-bearing metal alumina spinel characterized by the formula MAl 2 O 4 , wherein M is chromium, iron, cobalt, nickel, copper, cadmium, mercury, or zinc to desorb sulfur thereon. In the sulfur sorption cycle, due to the simultaneous adsorption of water and sulfur, the useful life of the metal alumina spinel for sulfur adsorption can be extended, and the sorbent made more easily regenerable after contact with a sulfur-bearing gas stream, notably sulfur-bearing wet hydrogen or wet hydrogen-rich gas streams

  13. Organic carbon spiralling in stream ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Newbold, J D; Mulholland, P J; Elwood, J W; O' Neill, R V

    1982-01-01

    The term spiralling has been used to describe the combined processes of cycling and longitudinal transport in streams. As a measure or organic carbon spiralling, we introduced organic carbon turnover length, S, defined as the average or expected downstream distance travelled by a carbon atom between its entry or fixation in the stream and its oxidation. Using a simple model for organic carbon dynamics in a stream, we show that S is closely related to fisher and Likens' ecosystem efficiency. Unlike efficiency, however, S is independent of the length of the study reach, and values of S determined in streams of differing lengths can be compared. Using data from three different streams, we found the relationship between S and efficiency to agree closely with the model prediction. Hypotheses of stream functioning are discussed in the context of organic carbeon spiralling theory.

  14. The Pacific northwest stream quality assessment

    Science.gov (United States)

    Van Metre, Peter C.; Morace, Jennifer L.; Sheibley, Rich W.

    2015-01-01

    In 2015, the U.S. Geological Survey (USGS) National Water-Quality Assessment (NAWQA) program is assessing stream quality in the Pacific Northwest. The goals of the Pacific Northwest Stream Quality Assessment (Pacific Northwest study) are to assess the quality of streams in the region by characterizing multiple water-quality factors that are stressors to aquatic life and to evaluate the relation between these stressors and biological communities. The effects of urbanization and agriculture on stream quality for the Puget Lowlands and Willamette Valley are the focus of this regional study. Findings will provide the public and policymakers with information regarding which human and environmental factors are the most critical in affecting stream quality and, thus, provide insights about possible approaches to protect or improve the health of streams in the region.

  15. LHCb : The LHCb Turbo stream

    CERN Multimedia

    Puig Navarro, Albert

    2015-01-01

    The LHCb experiment will record an unprecedented dataset of beauty and charm hadron decays during Run II of the LHC, set to take place between 2015 and 2018. A key computing challenge is to store and process this data, which limits the maximum output rate of the LHCb trigger. So far, LHCb has written out a few kHz of events containing the full raw sub-detector data, which are passed through a full offline event reconstruction before being considered for physics analysis. Charm physics in particular is limited by trigger output rate constraints. A new streaming strategy includes the possibility to perform the physics analysis with candidates reconstructed in the trigger, thus bypassing the offline reconstruction. In the "turbo stream" the trigger will write out a compact summary of "physics" objects containing all information necessary for analyses, and this will allow an increased output rate and thus higher average efficiencies and smaller selection biases. This idea will be commissioned and developed during...

  16. Streaming potential measurements of biosurfaces

    Science.gov (United States)

    Van Wagenen, R. A.; Andrade, J. D.; Hibbs, J. B., Jr.

    1976-01-01

    A technique based on the measurement of streaming potentials has been developed to evaluate the electrokinetic region of the cell periphery. This approach is feasible for cell lines propagated in in-vitro cell cultures in monolayer form. The advantage of this system is that cells may be evaluated in the living state atttached to a substrate; it is not necessary to subject the cells to enzymatic, chemical, or mechanical trauma required to obtain monodisperse suspensions which are then normally evaluated by microelectrophoresis. In this manner, it should be possible to study the influence of substrate and environmental factors on the charge density and potential at the cell periphery. The apparatus and procedure are described as well as some results concerning the electrokinetic potential of borosilicate capillaries as a function of ionic strength, pH, and temperature. The effect that turbulence and entrance flow conditions have on accurate streaming-potential measurements is discussed. The electrokinetic potential of BALB/c 3T12 fibroblasts has been quantified as a function of pH, ionic strength, glutaraldehyde fixation, and Giemsa staining.

  17. Chitin Degradation In Marine Bacteria

    DEFF Research Database (Denmark)

    Paulsen, Sara; Machado, Henrique; Gram, Lone

    2015-01-01

    Introduction: Chitin is the most abundant polymer in the marine environment and the second most abundant in nature. Chitin does not accumulate on the ocean floor, because of microbial breakdown. Chitin degrading bacteria could have potential in the utilization of chitin as a renewable carbon...... and nitrogen source in the fermentation industry.Methods: Here, whole genome sequenced marine bacteria were screened for chitin degradation using phenotypic and in silico analyses.Results: The in silico analyses revealed the presence of three to nine chitinases in each strain, however the number of chitinases...... chitin regulatory system.Conclusions: This study has provided insight into the ecology of chitin degradation in marine bacteria. It also served as a basis for choosing a more efficient chitin degrading production strain e.g. for the use of chitin waste for large-scale fermentations....

  18. Methylotrophic bacteria in sustainable agriculture.

    Science.gov (United States)

    Kumar, Manish; Tomar, Rajesh Singh; Lade, Harshad; Paul, Diby

    2016-07-01

    Excessive use of chemical fertilizers to increase production from available land has resulted in deterioration of soil quality. To prevent further soil deterioration, the use of methylotrophic bacteria that have the ability to colonize different habitats, including soil, sediment, water, and both epiphytes and endophytes as host plants, has been suggested for sustainable agriculture. Methylotrophic bacteria are known to play a significant role in the biogeochemical cycle in soil ecosystems, ultimately fortifying plants and sustaining agriculture. Methylotrophs also improve air quality by using volatile organic compounds such as dichloromethane, formaldehyde, methanol, and formic acid. Additionally, methylotrophs are involved in phosphorous, nitrogen, and carbon cycling and can help reduce global warming. In this review, different aspects of the interaction between methylotrophs and host plants are discussed, including the role of methylotrophs in phosphorus acquisition, nitrogen fixation, phytohormone production, iron chelation, and plant growth promotion, and co-inoculation of these bacteria as biofertilizers for viable agriculture practices.

  19. On-stream chemical element monitor

    International Nuclear Information System (INIS)

    Averitt, O.R.; Dorsch, R.R.

    1979-01-01

    An apparatus and method for on-stream chemical element monitoring are described wherein a multiplicity of sample streams are flowed continuously through individual analytical cells and fluorescence analyses are performed on the sample streams in sequence, together with a method of controlling the time duration of each analysis as a function of the concomitant radiation exposure of a preselected perforate reference material interposed in the sample-radiation source path

  20. Smart Streaming for Online Video Services

    OpenAIRE

    Chen, Liang; Zhou, Yipeng; Chiu, Dah Ming

    2013-01-01

    Bandwidth consumption is a significant concern for online video service providers. Practical video streaming systems usually use some form of HTTP streaming (progressive download) to let users download the video at a faster rate than the video bitrate. Since users may quit before viewing the complete video, however, much of the downloaded video will be "wasted". To the extent that users' departure behavior can be predicted, we develop smart streaming that can be used to improve user QoE with ...

  1. Nutrient spiraling in streams and river networks

    Science.gov (United States)

    Ensign, Scott H.; Doyle, Martin W.

    2006-12-01

    Over the past 3 decades, nutrient spiraling has become a unifying paradigm for stream biogeochemical research. This paper presents (1) a quantitative synthesis of the nutrient spiraling literature and (2) application of these data to elucidate trends in nutrient spiraling within stream networks. Results are based on 404 individual experiments on ammonium (NH4), nitrate (NO3), and phosphate (PO4) from 52 published studies. Sixty-nine percent of the experiments were performed in first- and second-order streams, and 31% were performed in third- to fifth-order streams. Uptake lengths, Sw, of NH4 (median = 86 m) and PO4 (median = 96 m) were significantly different (α = 0.05) than NO3 (median = 236 m). Areal uptake rates of NH4 (median = 28 μg m-2 min-1) were significantly different than NO3 and PO4 (median = 15 and 14 μg m-2 min-1, respectively). There were significant differences among NH4, NO3, and PO4 uptake velocity (median = 5, 1, and 2 mm min-1, respectively). Correlation analysis results were equivocal on the effect of transient storage on nutrient spiraling. Application of these data to a stream network model showed that recycling (defined here as stream length ÷ Sw) of NH4 and NO3 generally increased with stream order, while PO4 recycling remained constant along a first- to fifth-order stream gradient. Within this hypothetical stream network, cumulative NH4 uptake decreased slightly with stream order, while cumulative NO3 and PO4 uptake increased with stream order. These data suggest the importance of larger rivers to nutrient spiraling and the need to consider how stream networks affect nutrient flux between terrestrial and marine ecosystems.

  2. Metabolism of gentiopicroside (gentiopicrin) by human intestinal bacteria.

    Science.gov (United States)

    el-Sedawy, A I; Hattori, M; Kobashi, K; Namba, T

    1989-09-01

    As a part of our studies on the metabolism of crude drug components by intestinal bacteria, gentiopicroside (a secoiridoid glucoside isolated from Gentiana lutea), was anaerobically incubated with various defined strains of human intestinal bacteria. Many species had ability to transform it to a series of metabolites. Among them, Veillonella parvula ss parvula produced five metabolites, which were identified as erythrocentaurin, gentiopicral, 5-hydroxymethylisochroman-1-one,5-hydroxymethylisochromen-1- one and trans-5,6-dihydro-5-hydroxymethyl-6-methyl-1H,3H-pyrano[3,4-c]pyra n-1-one.

  3. Structured multi-stream command language

    International Nuclear Information System (INIS)

    Glad, A.S.

    1982-12-01

    A multi-stream command language was implemented to provide the sequential and decision-making operations necessary to run the neutral-beam ion sources connected to the Doublet III tokamak fusion device. A multi-stream command language was implemented in Pascal on a Classic 7870 running under MAX IV. The purpose of this paper is threefold. First, to provide a brief description of the programs comprising the command language including the operating system interaction. Second, to give a description of the language syntax and commands necessary to develop a procedure stream. Third, to provide a description of the normal operating procedures for executing either the sequential or interactive streams

  4. About the theory of congested transport streams

    OpenAIRE

    Valeriy GUK

    2009-01-01

    Talked about a theory, based on integrity of continuous motion of a transport stream. Placing of car and its speed is in a stream - second. Principle of application of the generalized methods of design and new descriptions of the states of transport streams opens up. Travelling and transport potentials are set, and also external capacity of the system a «transport stream» is an exergy, that allows to make differential equation and decide the applied tasks of organization of travelling motion....

  5. Physical, chemical, and biological characteristics of selected headwater streams along the Allegheny Front, Blair County, Pennsylvania, July 2011–September 2013

    Science.gov (United States)

    Low, Dennis J.; Brightbill, Robin A.; Eggleston, Heather L.; Chaplin, Jeffrey J.

    2016-02-29

    The Altoona Water Authority (AWA) obtains all of its water supply from headwater streams that drain western Blair County, an area underlain in part by black shale of the Marcellus Formation. Development of the shale-gas reservoirs will require new access roads, stream crossing, drill-pad construction, and pipeline installation, activities that have the potential to alter existing stream channel morphology, increase runoff and sediment supply, alter streamwater chemistry, and affect aquatic habitat. The U.S. Geological Survey, in cooperation with Altoona Water Authority and Blair County Conservation District, investigated the water quality of 12 headwater streams and biotic health of 10 headwater streams.

  6. The Overview and Appliance of some Streaming Video software solutions

    OpenAIRE

    Qin , Yan

    2010-01-01

    This paper introduces the basic streaming media technology, the streaming media system structure, principles of streaming media technology; streaming media file formats and so on. After that, it discusses the use streaming media in distance education, broadband video on demand, Internet broadcasting, video conferences and a more detailed exposition in streaming media. As the existing technology has been unable to satisfy the increasing needs of the Internet users, the streaming media technol...

  7. Metal concentrations in stream biofilm and sediments and their potential to explain biofilm microbial community structure

    International Nuclear Information System (INIS)

    Ancion, Pierre-Yves; Lear, Gavin; Dopheide, Andrew; Lewis, Gillian D.

    2013-01-01

    Concentrations of metals associated with sediments have traditionally been analysed to assess the extent of heavy metal contamination in freshwater environments. Stream biofilms present an alternative medium for this assessment which may be more relevant to the risk incurred by stream ecosystems as they are intensively grazed by aquatic organisms at a higher trophic level. Therefore, we investigated zinc, copper and lead concentrations in biofilms and sediments of 23 stream sites variously impacted by urbanisation. Simultaneously, biofilm bacterial and ciliate protozoan community structure was analysed by Automated Ribosomal Intergenic Spacer Analysis and Terminal Restriction Fragment Length Polymorphism, respectively. Statistical analysis revealed that biofilm associated metals explained a greater proportion of the variations observed in bacterial and ciliate communities than did sediment associated-metals. This study suggests that the analysis of metal concentrations in biofilms provide a good assessment of detrimental effects of metal contaminants on aquatic biota. - Highlights: ► Zn, Cu and Pb concentrations in biofilm and sediments from 23 streams were assessed. ► Bacteria and ciliate protozoa were simultaneously used as biological indicators. ► Zn and Cu were generally enriched in biofilm compared to sediments. ► Metals in biofilm provide a useful assessment of freshwater ecosystem contamination. ► Results highlight the likely ecological importance of biofilm associated metals. - Metal concentrations in stream biofilms provide a good assessment of the effects of trace metal contaminants on freshwater ecosystems.

  8. Altitudinal patterns of diversity and functional traits of metabolically active microorganisms in stream biofilms

    Science.gov (United States)

    Wilhelm, Linda; Besemer, Katharina; Fragner, Lena; Peter, Hannes; Weckwerth, Wolfram; Battin, Tom J

    2015-01-01

    Resources structure ecological communities and potentially link biodiversity to energy flow. It is commonly believed that functional traits (generalists versus specialists) involved in the exploitation of resources depend on resource availability and environmental fluctuations. The longitudinal nature of stream ecosystems provides changing resources to stream biota with yet unknown effects on microbial functional traits and community structure. We investigated the impact of autochthonous (algal extract) and allochthonous (spruce extract) resources, as they change along alpine streams from above to below the treeline, on microbial diversity, community composition and functions of benthic biofilms. Combining bromodeoxyuridine labelling and 454 pyrosequencing, we showed that diversity was lower upstream than downstream of the treeline and that community composition changed along the altitudinal gradient. We also found that, especially for allochthonous resources, specialisation by biofilm bacteria increased along that same gradient. Our results suggest that in streams below the treeline biofilm diversity, specialisation and functioning are associated with increasing niche differentiation as potentially modulated by divers allochthonous and autochthonous constituents contributing to resources. These findings expand our current understanding on biofilm structure and function in alpine streams. PMID:25978543

  9. Geomorphology controls the trophic base of stream food webs in a boreal watershed .

    Science.gov (United States)

    Smits, Adrianne P; Schindler, Daniel E; Brett, Michael T

    2015-07-01

    Abstract. Physical attributes of rivers control the quantity and quality of energy sources available to consumers, but it remains untested whether geomorphic conditions of whole watersheds affect the assimilation of different resources by stream organisms. We compared the fatty acid (FA) compositions of two invertebrate taxa (caddisflies, mayflies) collected from 16 streams in southwest Alaska, USA, to assess how assimilation of terrestrial organic matter (OM) and algae varied across a landscape gradient in watershed features. We found relatively higher assimilation of algae in high-gradient streams compared with low-gradient streams, and the opposite pattern for assimilation of terrestrial OM and microbes. The strength of these patterns was more pronounced for caddisflies than mayflies. Invertebrates from low-gradient watersheds had FA markers unique to methane-oxidizing bacteria and sulfate-reducing microbes, indicating a contribution of anaerobic pathways to primary consumers. Diversity of FA composition was highest in watersheds of intermediate slopes that contain both significant terrestrial inputs as well as high algal biomass. By controlling the accumulation rate and processing of terrestrial OM, watershed features influence the energetic base of food webs in boreal streams.

  10. Integration of Tidal Prism Model and HSPF for simulating indicator bacteria in coastal watersheds

    Science.gov (United States)

    Sobel, Rose S.; Rifai, Hanadi S.; Petersen, Christina M.

    2017-09-01

    Coastal water quality is strongly influenced by tidal fluctuations and water chemistry. There is a need for rigorous models that are not computationally or economically prohibitive, but still allow simulation of the hydrodynamics and bacteria sources for coastal, tidally influenced streams and bayous. This paper presents a modeling approach that links a Tidal Prism Model (TPM) implemented in an Excel-based modeling environment with a watershed runoff model (Hydrologic Simulation Program FORTRAN, HSPF) for such watersheds. The TPM is a one-dimensional mass balance approach that accounts for loading from tidal exchange, runoff, point sources and bacteria die-off at an hourly time step resolution. The novel use of equal high-resolution time steps in this study allowed seamless integration of the TPM and HSPF. The linked model was calibrated to flow and E. Coli data (for HSPF), and salinity and enterococci data (for the TPM) for a coastal stream in Texas. Sensitivity analyses showed the TPM to be most influenced by changes in net decay rates followed by tidal and runoff loads, respectively. Management scenarios were evaluated with the developed linked models to assess the impact of runoff load reductions and improved wastewater treatment plant quality and to determine the areas of critical need for such reductions. Achieving water quality standards for bacteria required load reductions that ranged from zero to 90% for the modeled coastal stream.

  11. Biodegradation of p-nitrophenol in an aqueous waste stream by immobilized bacteria.

    OpenAIRE

    Heitkamp, M A; Camel, V; Reuter, T J; Adams, W J

    1990-01-01

    Microbiological analyses of activated sludge reactors after repeated exposure to 100 mg of p-nitrophenol (PNP) per liter resulted in the isolation of three Pseudomonas species able to utilize PNP as a sole source of carbon and energy. Cell suspensions of the three Pseudomonas sp., designated PNP1, PNP2, and PNP3, mineralized 70, 60, and 45% of a 70-mg/liter dose of PNP in 24, 48, and 96 h, respectively. Mass-balance analyses of PNP residues for all three cultures showed that undegraded PNP wa...

  12. Tidal Turbines’ Layout in a Stream with Asymmetry and Misalignment

    Directory of Open Access Journals (Sweden)

    Nicolas Guillou

    2017-11-01

    Full Text Available A refined assessment of tidal currents variability is a prerequisite for successful turbine deployment in the marine environment. However, the numerical evaluation of the tidal kinetic energy resource relies, most of the time, on integrated parameters, such as the averaged or maximum stream powers. Predictions from a high resolution three-dimensional model are exploited here to characterize the asymmetry and misalignment between the flood and ebb tidal currents in the “Raz de Sein”, a strait off western Brittany (France with strong potential for array development. A series of parameters is considered to assess resource variability and refine the cartography of local potential tidal stream energy sites. The strait is characterized by strong tidal flow divergence with currents’ asymmetry liable to vary output power by 60% over a tidal cycle. Pronounced misalignments over 20 ∘ are furthermore identified in a great part of energetic locations, and this may account for a deficit of the monthly averaged extractable energy by more than 12%. As sea space is limited for turbines, it is finally suggested to aggregate flood and ebb-dominant stream powers on both parts of the strait to output energy with reduced asymmetry.

  13. Estimating stream discharge from a Himalayan Glacier using coupled satellite sensor data

    Science.gov (United States)

    Child, S. F.; Stearns, L. A.; van der Veen, C. J.; Haritashya, U. K.; Tarpanelli, A.

    2015-12-01

    The 4th IPCC report highlighted our limited understanding of Himalayan glacier behavior and contribution to the region's hydrology. Seasonal snow and glacier melt in the Himalayas are important sources of water, but estimates greatly differ about the actual contribution of melted glacier ice to stream discharge. A more comprehensive understanding of the contribution of glaciers to stream discharge is needed because streams being fed by glaciers affect the livelihoods of a large part of the world's population. Most of the streams in the Himalayas are unmonitored because in situ measurements are logistically difficult and costly. This necessitates the use of remote sensing platforms to obtain estimates of river discharge for validating hydrological models. In this study, we estimate stream discharge using cost-effective methods via repeat satellite imagery from Landsat-8 and SENTINEL-1A sensors. The methodology is based on previous studies, which show that ratio values from optical satellite bands correlate well with measured stream discharge. While similar, our methodology relies on significantly higher resolution imagery (30 m) and utilizes bands that are in the blue and near-infrared spectrum as opposed to previous studies using 250 m resolution imagery and spectral bands only in the near-infrared. Higher resolution imagery is necessary for streams where the source is a glacier's terminus because the width of the stream is often only 10s of meters. We validate our methodology using two rivers in the state of Kansas, where stream gauges are plentiful. We then apply our method to the Bhagirathi River, in the North-Central Himalayas, which is fed by the Gangotri Glacier and has a well monitored stream gauge. The analysis will later be used to couple river discharge and glacier flow and mass balance through an integrated hydrologic model in the Bhagirathi Basin.

  14. Interaction between stream temperature, streamflow, and groundwater exchanges in alpine streams

    Science.gov (United States)

    Constantz, James E.

    1998-01-01

    Four alpine streams were monitored to continuously collect stream temperature and streamflow for periods ranging from a week to a year. In a small stream in the Colorado Rockies, diurnal variations in both stream temperature and streamflow were significantly greater in losing reaches than in gaining reaches, with minimum streamflow losses occurring early in the day and maximum losses occurring early in the evening. Using measured stream temperature changes, diurnal streambed infiltration rates were predicted to increase as much as 35% during the day (based on a heat and water transport groundwater model), while the measured increase in streamflow loss was 40%. For two large streams in the Sierra Nevada Mountains, annual stream temperature variations ranged from 0° to 25°C. In summer months, diurnal stream temperature variations were 30–40% of annual stream temperature variations, owing to reduced streamflows and increased atmospheric heating. Previous reports document that one Sierra stream site generally gains groundwater during low flows, while the second Sierra stream site may lose water during low flows. For August the diurnal streamflow variation was 11% at the gaining stream site and 30% at the losing stream site. On the basis of measured diurnal stream temperature variations, streambed infiltration rates were predicted to vary diurnally as much as 20% at the losing stream site. Analysis of results suggests that evapotranspiration losses determined diurnal streamflow variations in the gaining reaches, while in the losing reaches, evapotranspiration losses were compounded by diurnal variations in streambed infiltration. Diurnal variations in stream temperature were reduced in the gaining reaches as a result of discharging groundwater of relatively constant temperature. For the Sierra sites, comparison of results with those from a small tributary demonstrated that stream temperature patterns were useful in delineating discharges of bank storage following

  15. Shifting stream planform state decreases stream productivity yet increases riparian animal production

    Science.gov (United States)

    Venarsky, Michael P.; Walters, David M.; Hall, Robert O.; Livers, Bridget; Wohl, Ellen

    2018-01-01

    In the Colorado Front Range (USA), disturbance history dictates stream planform. Undisturbed, old-growth streams have multiple channels and large amounts of wood and depositional habitat. Disturbed streams (wildfires and logging tested how these opposing stream states influenced organic matter, benthic macroinvertebrate secondary production, emerging aquatic insect flux, and riparian spider biomass. Organic matter and macroinvertebrate production did not differ among sites per unit area (m−2), but values were 2 ×–21 × higher in undisturbed reaches per unit of stream valley (m−1 valley) because total stream area was higher in undisturbed reaches. Insect emergence was similar among streams at the per unit area and per unit of stream valley. However, rescaling insect emergence to per meter of stream bank showed that the emerging insect biomass reaching the stream bank was lower in undisturbed sites because multi-channel reaches had 3 × more stream bank than single-channel reaches. Riparian spider biomass followed the same pattern as emerging aquatic insects, and we attribute this to bottom-up limitation caused by the multi-channeled undisturbed sites diluting prey quantity (emerging insects) reaching the stream bank (riparian spider habitat). These results show that historic landscape disturbances continue to influence stream and riparian communities in the Colorado Front Range. However, these legacy effects are only weakly influencing habitat-specific function and instead are primarily influencing stream–riparian community productivity by dictating both stream planform (total stream area, total stream bank length) and the proportional distribution of specific habitat types (pools vs riffles).

  16. A Statistical Method to Predict Flow Permanence in Dryland Streams from Time Series of Stream Temperature

    Directory of Open Access Journals (Sweden)

    Ivan Arismendi

    2017-12-01

    Full Text Available Intermittent and ephemeral streams represent more than half of the length of the global river network. Dryland freshwater ecosystems are especially vulnerable to changes in human-related water uses as well as shifts in terrestrial climates. Yet, the description and quantification of patterns of flow permanence in these systems is challenging mostly due to difficulties in instrumentation. Here, we took advantage of existing stream temperature datasets in dryland streams in the northwest Great Basin desert, USA, to extract critical information on climate-sensitive patterns of flow permanence. We used a signal detection technique, Hidden Markov Models (HMMs, to extract information from daily time series of stream temperature to diagnose patterns of stream drying. Specifically, we applied HMMs to time series of daily standard deviation (SD of stream temperature (i.e., dry stream channels typically display highly variable daily temperature records compared to wet stream channels between April and August (2015–2016. We used information from paired stream and air temperature data loggers as well as co-located stream temperature data loggers with electrical resistors as confirmatory sources of the timing of stream drying. We expanded our approach to an entire stream network to illustrate the utility of the method to detect patterns of flow permanence over a broader spatial extent. We successfully identified and separated signals characteristic of wet and dry stream conditions and their shifts over time. Most of our study sites within the entire stream network exhibited a single state over the entire season (80%, but a portion of them showed one or more shifts among states (17%. We provide recommendations to use this approach based on a series of simple steps. Our findings illustrate a successful method that can be used to rigorously quantify flow permanence regimes in streams using existing records of stream temperature.

  17. A statistical method to predict flow permanence in dryland streams from time series of stream temperature

    Science.gov (United States)

    Arismendi, Ivan; Dunham, Jason B.; Heck, Michael; Schultz, Luke; Hockman-Wert, David

    2017-01-01

    Intermittent and ephemeral streams represent more than half of the length of the global river network. Dryland freshwater ecosystems are especially vulnerable to changes in human-related water uses as well as shifts in terrestrial climates. Yet, the description and quantification of patterns of flow permanence in these systems is challenging mostly due to difficulties in instrumentation. Here, we took advantage of existing stream temperature datasets in dryland streams in the northwest Great Basin desert, USA, to extract critical information on climate-sensitive patterns of flow permanence. We used a signal detection technique, Hidden Markov Models (HMMs), to extract information from daily time series of stream temperature to diagnose patterns of stream drying. Specifically, we applied HMMs to time series of daily standard deviation (SD) of stream temperature (i.e., dry stream channels typically display highly variable daily temperature records compared to wet stream channels) between April and August (2015–2016). We used information from paired stream and air temperature data loggers as well as co-located stream temperature data loggers with electrical resistors as confirmatory sources of the timing of stream drying. We expanded our approach to an entire stream network to illustrate the utility of the method to detect patterns of flow permanence over a broader spatial extent. We successfully identified and separated signals characteristic of wet and dry stream conditions and their shifts over time. Most of our study sites within the entire stream network exhibited a single state over the entire season (80%), but a portion of them showed one or more shifts among states (17%). We provide recommendations to use this approach based on a series of simple steps. Our findings illustrate a successful method that can be used to rigorously quantify flow permanence regimes in streams using existing records of stream temperature.

  18. Hydrogeochemical and stream-sediment reconnaissance program at LLL

    International Nuclear Information System (INIS)

    Tinney, J.F.

    1977-03-01

    The Lawrence Livermore Laboratory (LLL) is conducting a Hydrogeochemical and Stream-Sediment Reconnaissance (HSSR) survey in support of ERDA's National Uranium Resource Evaluation (NURE) program. Included in the LLL portion of this survey are seven western states (Arizona, California, Idaho, Nevada, Oregon, Utah, and Washington). Similar surveys are being carried out in the rest of the continental United States, including Alaska, as part of a systematic nationwide study of the distribution of uranium in surface water, groundwater, and stream sediment. The overall objective is to identify favorable areas for uranium exploration. This paper describes the program being conducted by LLL to complete our portion of the survey by 1981. The topics discussed are geology and sample acquisition, sample preparation and analysis, and data-base management

  19. The effects of bacteria on the corrosion behavior of carbon steel in compacted bentonite

    International Nuclear Information System (INIS)

    Nishimura, T.; Wada, R.; Nishimoto, H.; Fujiwara, K.; Taniguchi, N.; Honda, A.

    1999-10-01

    As a part of evaluation of corrosion life of carbon steel overpack, the experimental studies have been performed on the effects of bacteria on the corrosion behavior of carbon steel in compacted bentonite using iron bacteria (IB) as a representative oxidizing bacteria and sulphur reducing bacteria (SRB) as a representative reducing bacteria. The results of the experimental studies showed that; The activity of SRB was low in compacted bentonite in spite of applying suitable condition for the action of bacteria such as temperature and nutritious solution. Although the corrosion behavior of carbon steel was affected by the existence of bacteria in simple solution, the corrosion rates of carbon steel in compacted bentonite were several μ m/year -10 μ m/year irrespective of coexistence of bacteria and that the corrosion behavior was not affected by the existence of bacteria. According to these results, it was concluded that the bacteria would not affect the corrosion behavior of carbon steel overpack under repository condition. (author)

  20. ENDOSPORES OF THERMOPHILIC FERMENTATIVE BACTERIA

    DEFF Research Database (Denmark)

    Volpi, Marta

    2016-01-01

    solely based on endospores of sulphate-reducing bacteria (SRB), which presumably constitute only a small fraction of the total thermophilic endospore community reaching cold environments. My PhD project developed an experimental framework for using thermophilic fermentative endospores (TFEs) to trace...

  1. Alternative sources of Legionella bacteria

    NARCIS (Netherlands)

    van Heijnsbergen, H.H.L.

    2017-01-01

    Legionella bacteria can cause Legionnaires’ disease (LD) in humans. Symptoms of LD can range from mild disease to severe pneumonia with sometimes fatal outcome. In the Netherlands, the most important infective agent is Legionella pneumophila. L. pneumophila infection is associated with aquatic

  2. Programmed survival of soil bacteria

    DEFF Research Database (Denmark)

    Jensen, Lars Bogø; Molin, Søren; Sternberg, Claus

    Biological containment systems have been developed for Pseudomonas putida and related soil bacteria. The systems are based on combinations of lethal genes and regulated gene expression. Two types of killing function have been employed: 1) A membrane protein interfering with the membrane potential...

  3. Automated radiometric detection of bacteria

    International Nuclear Information System (INIS)

    Waters, J.R.

    1974-01-01

    A new radiometric method called BACTEC, used for the detection of bacteria in cultures or in supposedly sterile samples, was discussed from the standpoint of methodology, both automated and semi-automated. Some of the results obtained so far were reported and some future applications and development possibilities were described. In this new method, the test sample is incubated in a sealed vial with a liquid culture medium containing a 14 C-labeled substrate. If bacteria are present, they break down the substrate, producing 14 CO 2 which is periodically extracted from the vial as a gas and is tested for radioactivity. If this gaseous radioactivity exceeds a threshold level, it is evidence of bacterial presence and growth in the test vial. The first application was for the detection of bacteria in the blood cultures of hospital patients. Data were presented showing typical results. Also discussed were future applications, such as rapid screening for bacteria in urine industrial sterility testing and the disposal of used 14 C substrates. (Mukohata, S.)

  4. Synthetic Biology in Streptomyces Bacteria

    NARCIS (Netherlands)

    Medema, Marnix H.; Breitling, Rainer; Takano, Eriko

    2011-01-01

    Actinomycete bacteria of the genus Streptomyces are major producers of bioactive compounds for the biotechnology industry. They are the source of most clinically used antibiotics, as well as of several widely used drugs against common diseases, including cancer . Genome sequencing has revealed that

  5. Deodorant bacteria; Des bacteries desodorisantes

    Energy Technology Data Exchange (ETDEWEB)

    Fanlo, J.L. [Ecole Nationale Superieure des Mines, 30 - Ales (France)

    1998-02-01

    Purifying bacteria: if this concept is not new, its application to gases cleansing has only been developed recently. This method allows to eliminate the volatile organic compounds and the gaseous effluents odors which come from industrial sites. Three bioreactors types exist at the present time. Their principles are explained. (O.M.) 6 refs.

  6. An ecohydrological stream type cassification of intermittent and ephemeral streams in the Southwestern United States 2397

    Science.gov (United States)

    Ephemeral and intermittent streams are the predominant fluvial forms in arid and semi-arid environments. Various studies have shown biological and habitat diversity in these lands to be considerably higher along stream corridors in comparison to adjacent uplands, yet knowledge of how these streams f...

  7. InSTREAM: the individual-based stream trout research and environmental assessment model

    Science.gov (United States)

    Steven F. Railsback; Bret C. Harvey; Stephen K. Jackson; Roland H. Lamberson

    2009-01-01

    This report documents Version 4.2 of InSTREAM, including its formulation, software, and application to research and management problems. InSTREAM is a simulation model designed to understand how stream and river salmonid populations respond to habitat alteration, including altered flow, temperature, and turbidity regimes and changes in channel morphology. The model...

  8. The ventral stream offers more affordance and the dorsal stream more memory than believed

    NARCIS (Netherlands)

    Postma, Albert; van der Lubbe, Robert Henricus Johannes; Zuidhoek, Sander

    2002-01-01

    Opposed to Norman's proposal, processing of affordance is likely to occur not solely in the dorsal stream but also in the ventral stream. Moreover, the dorsal stream might do more than just serve an important role in motor actions. It supports egocentric location coding as well. As such, it would

  9. Stream invertebrate productivity linked to forest subsidies: 37 stream-years of reference and experimental data

    Science.gov (United States)

    J. Bruce Wallace; Susan L Eggert; Judy L. Meyer; Jackson R. Webster

    2015-01-01

    Riparian habitats provide detrital subsidies of varying quantities and qualities to recipient ecosystems. We used long-term data from three reference streams (covering 24 stream-years) and 13-year whole-stream organic matter manipulations to investigate the influence of terrestrial detrital quantity and quality on benthic invertebrate community structure, abundance,...

  10. Evaluation of the streaming-matrix method for discrete-ordinates duct-streaming calculations

    International Nuclear Information System (INIS)

    Clark, B.A.; Urban, W.T.; Dudziak, D.J.

    1983-01-01

    A new deterministic streaming technique called the Streaming Matrix Hybrid Method (SMHM) is applied to two realistic duct-shielding problems. The results are compared to standard discrete-ordinates and Monte Carlo calculations. The SMHM shows promise as an alternative deterministic streaming method to standard discrete-ordinates

  11. Leaf litter processing in West Virginia mountain streams: effects of temperature and stream chemistry

    Science.gov (United States)

    Jacquelyn M. Rowe; William B. Perry; Sue A. Perry

    1996-01-01

    Climate change has the potential to alter detrital processing in headwater streams, which receive the majority of their nutrient input as terrestrial leaf litter. Early placement of experimental leaf packs in streams, one month prior to most abscission, was used as an experimental manipulation to increase stream temperature during leaf pack breakdown. We studied leaf...

  12. Robust Watermarking of Video Streams

    Directory of Open Access Journals (Sweden)

    T. Polyák

    2006-01-01

    Full Text Available In the past few years there has been an explosion in the use of digital video data. Many people have personal computers at home, and with the help of the Internet users can easily share video files on their computer. This makes possible the unauthorized use of digital media, and without adequate protection systems the authors and distributors have no means to prevent it.Digital watermarking techniques can help these systems to be more effective by embedding secret data right into the video stream. This makes minor changes in the frames of the video, but these changes are almost imperceptible to the human visual system. The embedded information can involve copyright data, access control etc. A robust watermark is resistant to various distortions of the video, so it cannot be removed without affecting the quality of the host medium. In this paper I propose a video watermarking scheme that fulfills the requirements of a robust watermark. 

  13. Streaming Multiframe Deconvolutions on GPUs

    Science.gov (United States)

    Lee, M. A.; Budavári, T.

    2015-09-01

    Atmospheric turbulence distorts all ground-based observations, which is especially detrimental to faint detections. The point spread function (PSF) defining this blur is unknown for each exposure and varies significantly over time, making image analysis difficult. Lucky imaging and traditional co-adding throws away lots of information. We developed blind deconvolution algorithms that can simultaneously obtain robust solutions for the background image and all the PSFs. It is done in a streaming setting, which makes it practical for large number of big images. We implemented a new tool that runs of GPUs and achieves exceptional running times that can scale to the new time-domain surveys. Our code can quickly and effectively recover high-resolution images exceeding the quality of traditional co-adds. We demonstrate the power of the method on the repeated exposures in the Sloan Digital Sky Survey's Stripe 82.

  14. Streaming Algorithms for Line Simplification

    DEFF Research Database (Denmark)

    Abam, Mohammad; de Berg, Mark; Hachenberger, Peter

    2010-01-01

    this problem in a streaming setting, where we only have a limited amount of storage, so that we cannot store all the points. We analyze the competitive ratio of our algorithms, allowing resource augmentation: we let our algorithm maintain a simplification with 2k (internal) points and compare the error of our...... simplification to the error of the optimal simplification with k points. We obtain the algorithms with O(1) competitive ratio for three cases: convex paths, where the error is measured using the Hausdorff distance (or Fréchet distance), xy-monotone paths, where the error is measured using the Hausdorff distance...... (or Fréchet distance), and general paths, where the error is measured using the Fréchet distance. In the first case the algorithm needs O(k) additional storage, and in the latter two cases the algorithm needs O(k 2) additional storage....

  15. SACCHARIFICATION OF CORNCOB USING CELLULOLYTIC BACTERIA FOR BIOETHANOL PRODUCTION

    Directory of Open Access Journals (Sweden)

    TITI CANDRA SUNARTI

    2010-08-01

    Full Text Available The use of cellulose degrading enzyme (cellulases for hydrolysis of lignocellulosic material is a part of bioethanol production process. In this experiment, delignified corncob, its cellulose fraction and alpha cellulose were used as substrates to produce fermentable sugar by using three local isolates of celluloytic bacteria (C5-1, C4-4, C11-1 and Cmix ; mixed cultures of three isolates, and Saccharomyces cereviseae to produce ethanol. The results showed that all isolates of cellulolytic bacteria can grow on cellulose fraction better than on delignified corncob, and alpha cellulose. The highest hydrolytic activity produced from cellulose fraction was by isolate C4-4, which liberated 3.50 g/l of total sugar. Ethanol can be produced by mixed culture of bacteria and yeast, but because of competitive growth, the fermentation only produced 0.39-0.47 g/l of ethanol.

  16. Plant growth-promoting bacteria: mechanisms and applications.

    Science.gov (United States)

    Glick, Bernard R

    2012-01-01

    The worldwide increases in both environmental damage and human population pressure have the unfortunate consequence that global food production may soon become insufficient to feed all of the world's people. It is therefore essential that agricultural productivity be significantly increased within the next few decades. To this end, agricultural practice is moving toward a more sustainable and environmentally friendly approach. This includes both the increasing use of transgenic plants and plant growth-promoting bacteria as a part of mainstream agricultural practice. Here, a number of the mechanisms utilized by plant growth-promoting bacteria are discussed and considered. It is envisioned that in the not too distant future, plant growth-promoting bacteria (PGPB) will begin to replace the use of chemicals in agriculture, horticulture, silviculture, and environmental cleanup strategies. While there may not be one simple strategy that can effectively promote the growth of all plants under all conditions, some of the strategies that are discussed already show great promise.

  17. Strategies for managing the effects of urban development on streams

    Science.gov (United States)

    Cappiella, Karen; Stack, William P.; Fraley-McNeal, Lisa; Lane, Cecilia; McMahon, Gerard

    2012-01-01

    Urban development remains an important agent of environmental change in the United States. The U.S. population grew by 17 percent from 1982 to 1997, while urbanized land area grew by 47 percent, suggesting that urban land consumption far outpaced population growth (Fulton and others, 2001; Sierra Club, 2003; American Farmland Trust, 2009). Eighty percent of Americans now live in metropolitan areas. Each American effectively occupies about 20 percent more developed land (for housing, schools, shopping, roads, and other related services) than 20 years ago (Markham and Steinzor, 2006). Passel and Cohn (2008) predict a dramatic 48 percent increase in the population of the United States from 2005 to 2050. The advantages and challenges of living in these developed areas—convenience, congestion, employment, pollution—are part of the day-to-day realities of most Americans. Nowhere are the environmental changes associated with urban development more evident than in urban streams. The U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program investigation of the effects of urban development on stream ecosystems (EUSE) during 1999–2004 provides the most spatially comprehensive analysis of stream impacts of urban development that has been completed in the United States. A nationally consistent study design was used in nine metropolitan areas of the United States—Portland, Oregon; Salt Lake City, Utah; Birmingham, Alabama; Atlanta, Georgia; Raleigh, North Carolina; Boston, Massachusetts; Denver, Colorado; Dallas, Texas; and Milwaukee, Wisconsin. A summary report published as part of the EUSE study describes several of these impacts on urban streams (Coles and others, 2012).

  18. Fuzzy species among recombinogenic bacteria

    Directory of Open Access Journals (Sweden)

    Fraser Christophe

    2005-03-01

    Full Text Available Abstract Background It is a matter of ongoing debate whether a universal species concept is possible for bacteria. Indeed, it is not clear whether closely related isolates of bacteria typically form discrete genotypic clusters that can be assigned as species. The most challenging test of whether species can be clearly delineated is provided by analysis of large populations of closely-related, highly recombinogenic, bacteria that colonise the same body site. We have used concatenated sequences of seven house-keeping loci from 770 strains of 11 named Neisseria species, and phylogenetic trees, to investigate whether genotypic clusters can be resolved among these recombinogenic bacteria and, if so, the extent to which they correspond to named species. Results Alleles at individual loci were widely distributed among the named species but this distorting effect of recombination was largely buffered by using concatenated sequences, which resolved clusters corresponding to the three species most numerous in the sample, N. meningitidis, N. lactamica and N. gonorrhoeae. A few isolates arose from the branch that separated N. meningitidis from N. lactamica leading us to describe these species as 'fuzzy'. Conclusion A multilocus approach using large samples of closely related isolates delineates species even in the highly recombinogenic human Neisseria where individual loci are inadequate for the task. This approach should be applied by taxonomists to large samples of other groups of closely-related bacteria, and especially to those where species delineation has historically been difficult, to determine whether genotypic clusters can be delineated, and to guide the definition of species.

  19. Cryptanalysis of the full Spritz stream cipher

    DEFF Research Database (Denmark)

    Banik, Subhadeep; Isobe, Takanori

    2016-01-01

    Spritz is a stream cipher proposed by Rivest and Schuldt at the rump session of CRYPTO 2014. It is intended to be a replacement of the popular RC4 stream cipher. In this paper we propose distinguishing attacks on the full Spritz, based on a short-term bias in the first two bytes of a keystream an...

  20. Predicting quality of experience in multimedia streaming

    NARCIS (Netherlands)

    Menkovski, V.; Oredope, A.; Liotta, A.; Cuadra Sánchez, A.

    2009-01-01

    Measuring and predicting the user’s Quality of Experience (QoE) of a multimedia stream is the first step towards improving and optimizing the provision of mobile streaming services. This enables us to better understand how Quality of Service (QoS) parameters affect service quality, as it is actually

  1. Flooding in ephemeral streams: incorporating transmission losses

    Science.gov (United States)

    Stream flow in semiarid lands commonly occurs as a form of flash floods in dry ephemeral stream beds. The goal of this research is to couple hydrological and hydraulic models treats channel transmission losses and test the methodology in the USDA-ARS Walnut Gulch Experimental Watershed (WGEW). For h...

  2. Organism-substrate relationships in lowland streams

    NARCIS (Netherlands)

    Tolkamp, H.H.

    1980-01-01

    A field and laboratory study on the microdistribution of bottom dwelling macroinvertebrates to investigate the role of the stream substrate In the development and preservation of the macroinvertebrate communities in natural, undisturbed lowland streams is described. Field data on bottom substrates

  3. What Can Hierarchies Do for Data Streams?

    DEFF Research Database (Denmark)

    Yin, Xuepeng; Pedersen, Torben Bach

    2007-01-01

    Abstract. Much effort has been put into building data streams management systems for querying data streams. However, the query languages have mostly been SQL-based and aimed for low-level analysis of base data; therefore, there has been little work on supporting OLAP-like queries that provide rea...

  4. Coldwater fish in wadeable streams [Chapter 8

    Science.gov (United States)

    Jason B. Dunham; Amanda E. Rosenberger; Russell F. Thurow; C. Andrew Dolloff; Philip J. Howell

    2009-01-01

    Small, wadeable streams comprise the majority of habitats available to fishes in fluvial networks. Wadeable streams are generally less than 1 m deep, and fish can be sampled without the use of water craft. Cold waters are defined as having mean 7-d summer maximum water temperatures of less than 20°C and providing habitat for coldwater fishes.

  5. Round-Robin Streaming with Generations

    DEFF Research Database (Denmark)

    Li, Yao; Vingelmann, Peter; Pedersen, Morten Videbæk

    2012-01-01

    We consider three types of application layer coding for streaming over lossy links: random linear coding, systematic random linear coding, and structured coding. The file being streamed is divided into sub-blocks (generations). Code symbols are formed by combining data belonging to the same...

  6. Streaming for Mathematics in Victorian Secondary Schools

    Science.gov (United States)

    Forgasz, Helen

    2010-01-01

    Streaming (or ability grouping) for mathematics learning is a contentious issue. It can also be considered an issue of equity or social justice as some students may be adversely affected by the practice. Currently, the Victorian Department of Education and Early Childhood Development (DEECD) does not appear to have clear guidelines on streaming.…

  7. Salmon carcass movements in forest streams

    Science.gov (United States)

    Burke Strobel; Daniel R. Shivley; Brett B. Roper

    2009-01-01

    The movements of salmon carcasses over time were studied in two forest streams in the context of a large-scale salmon carcass supplementation program. The objectives were to assess both the level of treatment after stream flows had displaced carcasses and to evaluate whether the magnitude of carcass movements outside of a given reach could be predicted. The movements...

  8. THE PAL 5 STAR STREAM GAPS

    International Nuclear Information System (INIS)

    Carlberg, R. G.; Hetherington, Nathan; Grillmair, C. J.

    2012-01-01

    Pal 5 is a low-mass, low-velocity-dispersion, globular cluster with spectacular tidal tails. We use the Sloan Digital Sky Survey Data Release 8 data to extend the density measurements of the trailing star stream to 23 deg distance from the cluster, at which point the stream runs off the edge of the available sky coverage. The size and the number of gaps in the stream are measured using a filter which approximates the structure of the gaps found in stream simulations. We find 5 gaps that are at least 99% confidence detections with about a dozen gaps at 90% confidence. The statistical significance of a gap is estimated using bootstrap resampling of the control regions on either side of the stream. The density minimum closest to the cluster is likely the result of the epicyclic orbits of the tidal outflow and has been discounted. To create the number of 99% confidence gaps per unit length at the mean age of the stream requires a halo population of nearly a thousand dark matter sub-halos with peak circular velocities above 1 km s –1 within 30 kpc of the galactic center. These numbers are a factor of about three below cold stream simulation at this sub-halo mass or velocity but, given the uncertainties in both measurement and more realistic warm stream modeling, are in substantial agreement with the LCDM prediction.

  9. Storm Sewage Dilution in Smaller Streams

    DEFF Research Database (Denmark)

    Larsen, Torben; Vestergaard, Kristian

    1987-01-01

    A numerical model has been used to show how dilution in smaller streams can be effected by unsteady hydraulic conditions caused by a storm sewage overflow.......A numerical model has been used to show how dilution in smaller streams can be effected by unsteady hydraulic conditions caused by a storm sewage overflow....

  10. Shifting stream planform state decreases stream productivity yet increases riparian animal production

    Science.gov (United States)

    Venarsky, Michael P.; Walters, David M.; Hall, Robert O.; Livers, Bridget; Wohl, Ellen

    2018-01-01

    In the Colorado Front Range (USA), disturbance history dictates stream planform. Undisturbed, old-growth streams have multiple channels and large amounts of wood and depositional habitat. Disturbed streams (wildfires and logging production, emerging aquatic insect flux, and riparian spider biomass. Organic matter and macroinvertebrate production did not differ among sites per unit area (m−2), but values were 2 ×–21 × higher in undisturbed reaches per unit of stream valley (m−1 valley) because total stream area was higher in undisturbed reaches. Insect emergence was similar among streams at the per unit area and per unit of stream valley. However, rescaling insect emergence to per meter of stream bank showed that the emerging insect biomass reaching the stream bank was lower in undisturbed sites because multi-channel reaches had 3 × more stream bank than single-channel reaches. Riparian spider biomass followed the same pattern as emerging aquatic insects, and we attribute this to bottom-up limitation caused by the multi-channeled undisturbed sites diluting prey quantity (emerging insects) reaching the stream bank (riparian spider habitat). These results show that historic landscape disturbances continue to influence stream and riparian communities in the Colorado Front Range. However, these legacy effects are only weakly influencing habitat-specific function and instead are primarily influencing stream–riparian community productivity by dictating both stream planform (total stream area, total stream bank length) and the proportional distribution of specific habitat types (pools vs riffles).

  11. Organic Seston Dynamics in Upland Neotropical Streams: Implications for Amphibian Declines

    Science.gov (United States)

    Peterson, S. D.; Colon-Gaud, C.; Whiles, M. R.; Hunte-Brown, M.; Connelly, S.; Kilham, S.; Pringle, C. M.; Lips, K. R.; Brenes, R.

    2005-05-01

    Organic seston represents food for filter feeders and a mechanism for downstream transport of energy and nutrients. As part of a study assessing the ecological impacts of stream-breeding anuran extirpations, we examined seston dynamics in 2 stream reaches with tadpoles (El Cope) and 2 without (Fortuna) in the Panamanian uplands. All reaches are high gradient with annual average discharge ranging from 46-102 L/s. Samples were collected multiple times per month at various discharges, sieved into fine (98μm) and very fine (1.6μm) fractions, and processed to estimate ash-free dry mass (AFDM), total C, and total N. Average annual concentrations ranged from 0.52- 2.51 mg/L (fine) and 2.04-3.14 mg/L (very fine), and total export ranged from 0.27-7,981 mg/s across all streams. On average, very fine particles comprised 78% of export from El Cope sites and 61% from Fortuna streams. Average total N export ranged from 5.32-30.53 mg/s in El Cope sites and 1.71-6.04 mg/s at Fortuna. Average particle quality (C/N) in El Cope streams was higher (7.6) than Fortuna streams (11.5). Lower export of very fine particles and lower seston quality in Fortuna streams suggests the loss of tadpoles may influence seston dynamics and quality in these systems.

  12. Decentralized Cloud Method For Multicasting Media Stream

    Directory of Open Access Journals (Sweden)

    D M B N Bandara

    2015-08-01

    Full Text Available With the advancement of Information technology the concept of idea sharing has advanced. Mostly on presentations personal computer and projector have become essentials. But on most occasions for connecting these equipment cables and physical devices are used. This is inefficient and time consuming. If a problem occurs someone with technical knowledge is necessary to solve the situation. The objective of this research is to use the wireless technology to reduce the manual configuration and build up a platform where one can easily share files a visuals media and feedback. A system has been developed to detect all the devices over a network and upon granted permission will share video audio and access controls. Final outcome of the research was a collaborative software bundle which work together on a network. One part of the system is a Desktop Network Software. And other is a Mobile Application. Desktop application can detect all other devices in the network which provides the same facility and if required can allocate a group and share its screen files and have a message stream to each device using multicasting. Mobile application can act as a mobile remote to the host computer of the group which can detect any input from user and pass it to the system.

  13. Genomic and Evolutionary Perspectives on Sulfur Metabolism in Green Sulfur Bacteria

    DEFF Research Database (Denmark)

    Frigaard, Niels-Ulrik; Bryant, Donald A.

    2008-01-01

    Green sulfur bacteria (GSB) are anaerobic photoautotrophs that oxidize sulfide, elemental sulfur, thiosulfate, ferrous iron, and hydrogen for growth. We present here an analysis of the distribution and evolution of enzymes involved in oxidation of sulfur compounds in GSB based on genome sequence......, in combination with phylogenetic analyses, suggests that the Dsr system in GSB could be a recent acquisition, which was obtained by lateral gene transfer in part from sulfideoxidizing bacteria and in part from sulfate-reducing bacteria. All thiosulfate-utilizing GSB strains have an identical sox gene cluster...

  14. Characterization of radiation-resistant vegetative bacteria in beef

    International Nuclear Information System (INIS)

    Welch, A.B.; Maxcy, R.B.

    1975-01-01

    Ground beef contains numerous microorganisms of various types. The commonly recognized bacteria are associated with current problems of spoilage. Irradiation, however, contributes a new factor through selective destruction of the microflora. The residual microorganisms surviving a nonsterilizing dose are predominantly gram-negative coccobacilli. Various classifications have been given, e.g., Moraxella, Acinetobacter, Achromobacter, etc. For a more detailed study of these radiation-resistant bacteria occurring in ground beef, an enrichment procedure was used for isolation. By means of morphological and biochemical tests, most of the isolates were found to be Moraxella, based on current classifications. The range of growth temperatures was from 2 to 50 C. These bacteria were relatively heat sensitive, e.g., D 10 of 5.4 min at 70 0 C or less. The radiation resistance ranged from D 10 values of 273 to 2,039 krad. Thus, some were more resistant than any presently recognized spores. A reference culture of Moraxella osloensis was irradiated under conditions comparable to the enrichment procedure used with the ground beef. The only apparent changes were in morphology and penicillin sensitivity. However, after a few subcultures these bacteria reverted to the characteristics of the parent strain. Thus, it is apparent that these isolates are a part of the normal flora of ground beef and not aberrant forms arising from the irradiation procedure. The significance, if any, of these bacteria is not presently recognized. (auth)

  15. Stream Response to an Extreme Defoliation Event

    Science.gov (United States)

    Gold, A.; Loffredo, J.; Addy, K.; Bernhardt, E. S.; Berdanier, A. B.; Schroth, A. W.; Inamdar, S. P.; Bowden, W. B.

    2017-12-01

    Extreme climatic events are known to profoundly impact stream flow and stream fluxes. These events can also exert controls on insect outbreaks, which may create marked changes in stream characteristics. The invasive Gypsy Moth (Lymantria dispar dispar) experiences episodic infestations based on extreme climatic conditions within the northeastern U.S. In most years, gypsy moth populations are kept in check by diseases. In 2016 - after successive years of unusually warm, dry spring and summer weather -gypsy moth caterpillars defoliated over half of Rhode Island's 160,000 forested ha. No defoliation of this magnitude had occurred for more than 30 years. We examined one RI headwater stream's response to the defoliation event in 2016 compared with comparable data in 2014 and 2015. Stream temperature and flow was gauged continuously by USGS and dissolved oxygen (DO) was measured with a YSI EXO2 sonde every 30 minutes during a series of deployments in the spring, summer and fall from 2014-2016. We used the single station, open channel method to estimate stream metabolism metrics. We also assessed local climate and stream temperature data from 2009-2016. We observed changes in stream responses during the defoliation event that suggest changes in ET, solar radiation and heat flux. Although the summer of 2016 had more drought stress (PDSI) than previous years, stream flow occurred throughout the summer, in contrast to several years with lower drought stress when stream flow ceased. Air temperature in 2016 was similar to prior years, but stream temperature was substantially higher than the prior seven years, likely due to the loss of canopy shading. DO declined dramatically in 2016 compared to prior years - more than the rising stream temperatures would indicate. Gross Primary Productivity was significantly higher during the year of the defoliation, indicating more total fixation of inorganic carbon from photo-autotrophs. In 2016, Ecosystem Respiration was also higher and Net

  16. Method to support Total Maximum Daily Load development using hydrologic alteration as a surrogate to address aquatic life impairment in New Jersey streams

    Science.gov (United States)

    Kennen, Jonathan G.; Riskin, Melissa L.; Reilly, Pamela A.; Colarullo, Susan J.

    2013-01-01

    More than 300 ambient monitoring sites in New Jersey have been identified by the New Jersey Department of Environmental Protection (NJDEP) in its integrated water-quality monitoring and assessment report (that is, the 305(b) Report on general water quality and 303(d) List of waters that do not support their designated uses) as being impaired with respect to aquatic life; however, no unambiguous stressors (for example, nutrients or bacteria) have been identified. Because of the indeterminate nature of the broad range of possible impairments, surrogate measures that more holistically encapsulate the full suite of potential environmental stressors need to be developed. Streamflow alteration resulting from anthropogenic changes in the landscape is one such surrogate. For example, increases in impervious surface cover (ISC) commonly cause increases in surface runoff, which can result in “flashy” hydrology and other changes in the stream corridor that are associated with streamflow alteration. The NJDEP has indicated that methodologies to support a hydrologically based Total Maximum Daily Load (hydro-TMDL) need to be developed in order to identify hydrologic targets that represent a minimal percent deviation from a baseline condition (“minimally altered”) as a surrogate measure to meet criteria in support of designated uses. The primary objective of this study was to develop an applicable hydro-TMDL approach to address aquatic-life impairments associated with hydrologic alteration for New Jersey streams. The U.S. Geological Survey, in cooperation with the NJDEP, identified 51 non- to moderately impaired gaged streamflow sites in the Raritan River Basin for evaluation. Quantile regression (QR) analysis was used to compare flow and precipitation records and identify baseline hydrographs at 37 of these sites. At sites without an appropriately long period of record (POR) or where a baseline hydrograph could not be identified with QR, a rainfall-runoff model was used

  17. Motion of shocks through interplanetary streams

    International Nuclear Information System (INIS)

    Burlaga, L.F.; Scudder, J.D.

    1975-01-01

    A model for the motion of flare-generated shocks through interplanetary streams is presented, illustrating the effects of a stream-shock interaction on the shock strength and geometry. It is a gas dynamic calculation based on Whitham's method and on an empirical approximation for the relevant characteristics of streams. The results show that the Mach number of a shock can decrease appreciably to near unity in the interaction region ahead of streams and that the interaction of a spherically symmetric shock with a spiral-shaped corotating stream can cause significant distortions of the initial shock front geometry. The geometry of the February 15--16, 1967, shock discussed by Lepping and Chao (1972) is qualitatively explained by this model

  18. The composition of corotating energetic particle streams

    International Nuclear Information System (INIS)

    McGuire, R.E.; von Rosenvinge, T.T.; McDonald, F.B.

    1978-01-01

    The relative abundances of 1.5--23 MeV per nucleon ions in corotating nucleon streams are compared with ion abundances in particle events associated with solar flares and with solar and solar wind abundances. He/O and C/O ratios are found to be a factor of the order 2--3 greater in corotating streams than in flare-associated events. The distribution of H/He ratios in corotating streams is found to be much narrower and of lower average value than in flare-associated events. H/He in corotating energetic particle streams compares favorably in both lack of variability and numerical value with H/He in high-speed solar wind plasma streams. The lack of variability suggests that the source population for the corotating energetic particles is the solar wind, a suggestion consistent with acceleration of the corotating particles in interplanetary space

  19. The ecology and biogeochemistry of stream biofilms.

    Science.gov (United States)

    Battin, Tom J; Besemer, Katharina; Bengtsson, Mia M; Romani, Anna M; Packmann, Aaron I

    2016-04-01

    Streams and rivers form dense networks, shape the Earth's surface and, in their sediments, provide an immensely large surface area for microbial growth. Biofilms dominate microbial life in streams and rivers, drive crucial ecosystem processes and contribute substantially to global biogeochemical fluxes. In turn, water flow and related deliveries of nutrients and organic matter to biofilms constitute major constraints on microbial life. In this Review, we describe the ecology and biogeochemistry of stream biofilms and highlight the influence of physical and ecological processes on their structure and function. Recent advances in the study of biofilm ecology may pave the way towards a mechanistic understanding of the effects of climate and environmental change on stream biofilms and the biogeochemistry of stream ecosystems.

  20. StreamExplorer: A Multi-Stage System for Visually Exploring Events in Social Streams.

    Science.gov (United States)

    Wu, Yingcai; Chen, Zhutian; Sun, Guodao; Xie, Xiao; Cao, Nan; Liu, Shixia; Cui, Weiwei

    2017-10-18

    Analyzing social streams is important for many applications, such as crisis management. However, the considerable diversity, increasing volume, and high dynamics of social streams of large events continue to be significant challenges that must be overcome to ensure effective exploration. We propose a novel framework by which to handle complex social streams on a budget PC. This framework features two components: 1) an online method to detect important time periods (i.e., subevents), and 2) a tailored GPU-assisted Self-Organizing Map (SOM) method, which clusters the tweets of subevents stably and efficiently. Based on the framework, we present StreamExplorer to facilitate the visual analysis, tracking, and comparison of a social stream at three levels. At a macroscopic level, StreamExplorer uses a new glyph-based timeline visualization, which presents a quick multi-faceted overview of the ebb and flow of a social stream. At a mesoscopic level, a map visualization is employed to visually summarize the social stream from either a topical or geographical aspect. At a microscopic level, users can employ interactive lenses to visually examine and explore the social stream from different perspectives. Two case studies and a task-based evaluation are used to demonstrate the effectiveness and usefulness of StreamExplorer.Analyzing social streams is important for many applications, such as crisis management. However, the considerable diversity, increasing volume, and high dynamics of social streams of large events continue to be significant challenges that must be overcome to ensure effective exploration. We propose a novel framework by which to handle complex social streams on a budget PC. This framework features two components: 1) an online method to detect important time periods (i.e., subevents), and 2) a tailored GPU-assisted Self-Organizing Map (SOM) method, which clusters the tweets of subevents stably and efficiently. Based on the framework, we present Stream

  1. Sulphur bacteria mediated formation of Palaeoproterozoic phosphorites

    Science.gov (United States)

    Joosu, Lauri; Lepland, Aivo; Kirsimäe, Kalle

    2014-05-01

    Modern phosphorite formation is typically associated with high productivity in upwelling areas where apatite (Ca-phosphate) precipitation is mediated by sulphur oxidising bacteria [1]. They inhabit the oxic/anoxic interface within the upper few centimetres of sediment column, accumulating phosphate in their cells under oxic conditions and releasing it rapidly when conditions become anoxic. Sulphur bacteria are known to live in close association with a consortium of anaerobic methane oxidising archaea and syntrophic sulphate-reducing bacteria. Paleoproterozoic, c. 2.0 Ga Zaonega Formation in Karelia, Russia contains several P-rich intervals in the upper part of 1500 m thick succession of organic-rich sedimentary rocks interlayered with mafic tuffs and lavas. Apatite in these P-rich intervals forms impure laminae, lenses and round-oval nodules which diameters typically range from 300 to 1000 μm. Individual apatite particles in P-rich laminae and nodules commonly occur as cylinders that are 1-8 μm long and have diameters of 0.5-4 μm. Cross-sections of best preserved cylindrical apatite particles reveal a thin outer rim whereas the internal parts consist of small anhedral elongated crystallites, intergrown with carbonaceous material. During recrystallization the outer rim thickens towards interior and cylinders may attain hexagonal crystal habit, but their size and shape remains largely unchanged [2]. The sizes of Zaonega nodules are similar to giant sulphide-oxidising bacteria known from modern and ancient settings [3, 4]. Individual apatite cylinders and aggregates have shapes and sizes similar to the methanotrophic archaea that inhabit microbial mats in modern seep/vent areas where they operate in close associations with sulphur-oxidising microbial communities [5]. Seep/vent influence during the Zaonega phosphogenesis is indicated by variable, though positive Eu anomaly, expected in magmatically active sedimentary environment experiencing several lava flows

  2. Ebullitive methane emissions from oxygenated wetland streams

    Science.gov (United States)

    Crawford, John T.; Stanley, Emily H.; Spawn, Seth A.; Finlay, Jacques C.; Striegl, Robert G.

    2014-01-01

    Stream and river carbon dioxide emissions are an important component of the global carbon cycle. Methane emissions from streams could also contribute to regional or global greenhouse gas cycling, but there are relatively few data regarding stream and river methane emissions. Furthermore, the available data do not typically include the ebullitive (bubble-mediated) pathway, instead focusing on emission of dissolved methane by diffusion or convection. Here, we show the importance of ebullitive methane emissions from small streams in the regional greenhouse gas balance of a lake and wetland-dominated landscape in temperate North America and identify the origin of the methane emitted from these well-oxygenated streams. Stream methane flux densities from this landscape tended to exceed those of nearby wetland diffusive fluxes as well as average global wetland ebullitive fluxes. Total stream ebullitive methane flux at the regional scale (103 Mg C yr−1; over 6400 km2) was of the same magnitude as diffusive methane flux previously documented at the same scale. Organic-rich stream sediments had the highest rates of bubble release and higher enrichment of methane in bubbles, but glacial sand sediments also exhibited high bubble emissions relative to other studied environments. Our results from a database of groundwater chemistry support the hypothesis that methane in bubbles is produced in anoxic near-stream sediment porewaters, and not in deeper, oxygenated groundwaters. Methane interacts with other key elemental cycles such as nitrogen, oxygen, and sulfur, which has implications for ecosystem changes such as drought and increased nutrient loading. Our results support the contention that streams, particularly those draining wetland landscapes of the northern hemisphere, are an important component of the global methane cycle.

  3. Hydraulic Properties related to Stream Reaeration

    Energy Technology Data Exchange (ETDEWEB)

    Tsivoglou, E. C.; Wallace, J. R. [School of Civil Engineering, Georgia Institute of Technology, Atlanta, GA (United States)

    1970-09-15

    The paper reports the results of recent and current field tracer experiments designed to investigate the relationships between the reaeration capacity of a flowing stream and the stream's hydraulic properties. The purpose of the studies is to develop models for the accurate prediction of stream reaeration capacity on the basis of observation of the associated hydraulic properties. The ability of a flowing stream to absorb oxygen from the overlying atmosphere is the principal process by which the stream is able to recover its dissolved oxygen resources once they have been depleted by bacterial degradation of organic wastes. Accurate knowledge of stream reaeration capacity is therefore a necessity in determining the required degree of waste treatment, and the associated costs, in any specific case. Oxygen absorption can only occur at the air-water interface, hence reaeration is a direct function of the rate of surface water replacement due to turbulent mixing. The latter is not directly observable, and so reaeration capacity has not been observable before the quite recent development of a gaseous radiotracer technique for field measurement of reaeration. This procedure involves the simultaneous use of three tracers, namely a fluorescent dye for time of flow, tritiated water for accurate dispersion measurement, and dissolved krypton-85 for measurement of gas transfer. Field results obtained by this technique are highly reproducible. Field tracer studies of the reaeration capacities of three medium-sized streams have been conducted over a total of about fifty river miles. Associated hydraulic properties such as stream flow, cross-sectional area, depth, velocity, hydraulic gradient and dispersion have also been measured. Features such as waterfalls, rapids and pools are included, and more than eighty observations of the reaeration capacities of individual stream reaches have been made. The paper reports the observed relationships between stream reaeration capacity and

  4. Hydraulic properties related to stream reaeration

    Energy Technology Data Exchange (ETDEWEB)

    Tsivoglou, E C; Wallace, J R [School of Civil Engineering, Georgia Institute of Technology, Atlanta, GA (United States)

    1970-09-15

    The paper reports the results of recent and current field tracer experiments designed to investigate the relationships between the reaeration capacity of a flowing stream and the stream's hydraulic properties. The purpose of the studies is to develop models for the accurate prediction of stream reaeration capacity on the basis of observation of the associated hydraulic properties. The ability of a flowing stream to absorb oxygen from the overlying atmosphere is the principal process by which the stream is able to recover its dissolved oxygen resources once they have been depleted by bacterial degradation of organic wastes. Accurate knowledge of stream reaeration capacity is therefore a necessity in determining the required degree of waste treatment, and the associated costs, in any specific case. Oxygen absorption can only occur at the air-water interface, hence reaeration is a direct function of the rate of surface water replacement due to turbulent mixing. The latter is not directly observable, and so reaeration capacity has not been observable before the quite recent development of a gaseous radiotracer technique for field measurement of reaeration. This procedure involves the simultaneous use of three tracers, namely a fluorescent dye for time of flow, tritiated water for accurate dispersion measurement, and dissolved krypton-85 for measurement of gas transfer. Field results obtained by this technique are highly reproducible. Field tracer studies of the reaeration capacities of three medium-sized streams have been conducted over a total of about fifty river miles. Associated hydraulic properties such as stream flow, cross-sectional area, depth, velocity, hydraulic gradient and dispersion have also been measured. Features such as waterfalls, rapids and pools are included, and more than eighty observations of the reaeration capacities of individual stream reaches have been made. The paper reports the observed relationships between stream reaeration capacity and

  5. Thermal neutrons streaming in straight duct

    International Nuclear Information System (INIS)

    Jehouani, A.; Boulkheir, M.; Ichaoui, R.

    2000-01-01

    The neutron streaming in duct is due to two phenomena: a) direct propagation and b) reflection on duct wall. We have used the Monte Carlo method to evaluate the ratio of the reflected neutrons flux by the duct wall to the total flux at the exit of the duct for iron and aluminium. Ten neutrons energy groups are considered between 10 -5 eV and 10 eV. A Fortran program is developed to evaluate the neutron double differential albedo. It is shown that the two following approximations are largely justified: i) Three collisions in the duct wall are sufficient to attain the asymptotic limit of the multiscattered neutron double differential albedo ii) The points of entry and exit of the neutron in the duct wall may be considered the same for the multiscattered neutrons. For a punctual source at the mouth of the duct, we have determined the direct and the reflected part of the total thermal neutron flux at the exit of the duct for different lengths and different radius of the duct. For a punctual source, we have found that the major contribution to the total flux of neutrons at the exit is due to the neutron reflection by walls and the reflection contribution decreases when the neutron energy decreases. For a constant length of the duct, the reflected part decreases when the duct radius increases while for the disk shaped source we have found the opposite phenomena. The transmitted neutron flux distribution at the exit of the duct are determined for disk shaped source for different neutron energy and for different distance from the exit center. (author)

  6. StreamMap: Smooth Dynamic Visualization of High-Density Streaming Points.

    Science.gov (United States)

    Li, Chenhui; Baciu, George; Han, Yu

    2018-03-01

    Interactive visualization of streaming points for real-time scatterplots and linear blending of correlation patterns is increasingly becoming the dominant mode of visual analytics for both big data and streaming data from active sensors and broadcasting media. To better visualize and interact with inter-stream patterns, it is generally necessary to smooth out gaps or distortions in the streaming data. Previous approaches either animate the points directly or present a sampled static heat-map. We propose a new approach, called StreamMap, to smoothly blend high-density streaming points and create a visual flow that emphasizes the density pattern distributions. In essence, we present three new contributions for the visualization of high-density streaming points. The first contribution is a density-based method called super kernel density estimation that aggregates streaming points using an adaptive kernel to solve the overlapping problem. The second contribution is a robust density morphing algorithm that generates several smooth intermediate frames for a given pair of frames. The third contribution is a trend representation design that can help convey the flow directions of the streaming points. The experimental results on three datasets demonstrate the effectiveness of StreamMap when dynamic visualization and visual analysis of trend patterns on streaming points are required.

  7. Experimental investigation of acoustic streaming in a cylindrical wave guide up to high streaming Reynolds numbers.

    Science.gov (United States)

    Reyt, Ida; Bailliet, Hélène; Valière, Jean-Christophe

    2014-01-01

    Measurements of streaming velocity are performed by means of Laser Doppler Velocimetry and Particle Image Velociimetry in an experimental apparatus consisting of a cylindrical waveguide having one loudspeaker at each end for high intensity sound levels. The case of high nonlinear Reynolds number ReNL is particularly investigated. The variation of axial streaming velocity with respect to the axial and to the transverse coordinates are compared to available Rayleigh streaming theory. As expected, the measured streaming velocity agrees well with the Rayleigh streaming theory for small ReNL but deviates significantly from such predictions for high ReNL. When the nonlinear Reynolds number is increased, the outer centerline axial streaming velocity gets distorted towards the acoustic velocity nodes until counter-rotating additional vortices are generated near the acoustic velocity antinodes. This kind of behavior is followed by outer streaming cells only and measurements in the near wall region show that inner streaming vortices are less affected by this substantial evolution of fast streaming pattern. Measurements of the transient evolution of streaming velocity provide an additional insight into the evolution of fast streaming.

  8. Introduction to stream: An Extensible Framework for Data Stream Clustering Research with R

    Directory of Open Access Journals (Sweden)

    Michael Hahsler

    2017-02-01

    Full Text Available In recent years, data streams have become an increasingly important area of research for the computer science, database and statistics communities. Data streams are ordered and potentially unbounded sequences of data points created by a typically non-stationary data generating process. Common data mining tasks associated with data streams include clustering, classification and frequent pattern mining. New algorithms for these types of data are proposed regularly and it is important to evaluate them thoroughly under standardized conditions. In this paper we introduce stream, a research tool that includes modeling and simulating data streams as well as an extensible framework for implementing, interfacing and experimenting with algorithms for various data stream mining tasks. The main advantage of stream is that it seamlessly integrates with the large existing infrastructure provided by R. In addition to data handling, plotting and easy scripting capabilities, R also provides many existing algorithms and enables users to interface code written in many programming languages popular among data mining researchers (e.g., C/C++, Java and Python. In this paper we describe the architecture of stream and focus on its use for data stream clustering research. stream was implemented with extensibility in mind and will be extended in the future to cover additional data stream mining tasks like classification and frequent pattern mining.

  9. The Midwest Stream Quality Assessment—Influences of human activities on streams

    Science.gov (United States)

    Van Metre, Peter C.; Mahler, Barbara J.; Carlisle, Daren M.; Coles, James F.

    2018-04-16

    Healthy streams and the fish and other organisms that live in them contribute to our quality of life. Extensive modification of the landscape in the Midwestern United States, however, has profoundly affected the condition of streams. Row crops and pavement have replaced grasslands and woodlands, streams have been straightened, and wetlands and fields have been drained. Runoff from agricultural and urban land brings sediment and chemicals to streams. What is the chemical, physical, and biological condition of Midwestern streams? Which physical and chemical stressors are adversely affecting biological communities, what are their origins, and how might we lessen or avoid their adverse effects?In 2013, the U.S. Geological Survey (USGS) conducted the Midwest Stream Quality Assessment to evaluate how human activities affect the biological condition of Midwestern streams. In collaboration with the U.S. Environmental Protection Agency National Rivers and Streams Assessment, the USGS sampled 100 streams, chosen to be representative of the different types of watersheds in the region. Biological condition was evaluated based on the number and diversity of fish, algae, and invertebrates in the streams. Changes to the physical habitat and chemical characteristics of the streams—“stressors”—were assessed, and their relation to landscape factors and biological condition was explored by using mathematical models. The data and models help us to better understand how the human activities on the landscape are affecting streams in the region.

  10. Ecoregions and stream morphology in eastern Oklahoma

    Science.gov (United States)

    Splinter, D.K.; Dauwalter, D.C.; Marston, R.A.; Fisher, W.L.

    2010-01-01

    Broad-scale variables (i.e., geology, topography, climate, land use, vegetation, and soils) influence channel morphology. How and to what extent the longitudinal pattern of channel morphology is influenced by broad-scale variables is important to fluvial geomorphologists and stream ecologists. In the last couple of decades, there has been an increase in the amount of interdisciplinary research between fluvial geomorphologists and stream ecologists. In a historical context, fluvial geomorphologists are more apt to use physiographic regions to distinguish broad-scale variables, while stream ecologists are more apt to use the concept of an ecosystem to address the broad-scale variables that influence stream habitat. For this reason, we designed a study using ecoregions, which uses physical and biological variables to understand how landscapes influence channel processes. Ecoregions are delineated by similarities in geology, climate, soils, land use, and potential natural vegetation. In the fluvial system, stream form and function are dictated by processes observed throughout the fluvial hierarchy. Recognizing that stream form and function should differ by ecoregion, a study was designed to evaluate how the characteristics of stream channels differed longitudinally among three ecoregions in eastern Oklahoma, USA: Boston Mountains, Ozark Highlands, and Ouachita Mountains. Channel morphology of 149 stream reaches was surveyed in 1st- through 4th-order streams, and effects of drainage area and ecoregion on channel morphology was evaluated using multiple regressions. Differences existed (?????0.05) among ecoregions for particle size, bankfull width, and width/depth ratio. No differences existed among ecoregions for gradient or sinuosity. Particle size was smallest in the Ozark Highlands and largest in the Ouachita Mountains. Bankfull width was larger in the Ozark Highlands than in the Boston Mountains and Ouachita Mountains in larger streams. Width/depth ratios of the

  11. Stream Habitat Reach Summary - North Coast [ds63

    Data.gov (United States)

    California Natural Resource Agency — The shapefile is based on habitat unit level data summarized at the stream reach level. The database represents salmonid stream habitat surveys from 645 streams of...

  12. Determination of water quality index and portability of Iguedo stream ...

    African Journals Online (AJOL)

    Determination of water quality index and portability of Iguedo stream in Edo ... has been found functional in assessing the water quality of this stream based on the ... Key words: Water quality index, physicochemical parameters, Iguedo Stream.

  13. Re-engineering bacteria for ethanol production

    Science.gov (United States)

    Yomano, Lorraine P; York, Sean W; Zhou, Shengde; Shanmugam, Keelnatham; Ingram, Lonnie O

    2014-05-06

    The invention provides recombinant bacteria, which comprise a full complement of heterologous ethanol production genes. Expression of the full complement of heterologous ethanol production genes causes the recombinant bacteria to produce ethanol as the primary fermentation product when grown in mineral salts medium, without the addition of complex nutrients. Methods for producing the recombinant bacteria and methods for producing ethanol using the recombinant bacteria are also disclosed.

  14. Oligotrophic bacteria isolated from clinical materials.

    OpenAIRE

    Tada, Y; Ihmori, M; Yamaguchi, J

    1995-01-01

    Oligotrophic bacteria (oligotrophs) are microorganisms that grow in extremely nutritionally deficient conditions in which the concentrations of organic substances are low. Many oligotrophic bacteria were isolated from clinical materials including urine, sputum, swabbings of the throat, vaginal discharges, and others. Seventy-seven strains of oligotrophic bacteria from 871 samples of clinical material were isolated. A relatively higher frequency of isolation of oligotrophic bacteria was shown ...

  15. Ecology of endangered damselfly Coenagrion ornatum in post-mining streams in relation to their restoration

    OpenAIRE

    TICHÁNEK, Filip

    2016-01-01

    The thesis explores various aspects of ecology of endangered damselfly Coenagrion ornatum, the specialists for lowland headwaters, in post-mining streams of Radovesicka spoil. The first part of thesis is manuscript which has been already submitted in Journal of Insect Conservation. In the first part, we focused on population estimate of the local population using capture-recapture method, and explored its habitat requirements across life stages and spatial scales. In the next part, I assess m...

  16. Geobiology of Marine Magnetotactic Bacteria

    Science.gov (United States)

    2006-06-01

    prokaryotic cells of diverse phylogeny when grown in media containing 45 1mM iron, suggesting some kind of detoxification function . The inclusions were...salt marsh productivity. FISH also showed that aggregates consist of genetically identical cells. QPCR data indicated that populations are finely...my advisor Katrina Edwards for taking a chance on someone who initially knew nothing about magnetotactic bacteria, microbial ecology , or microbiology

  17. Hydrologic connectivity and the contribution of stream headwaters to ecological integrity at regional scales

    Science.gov (United States)

    Freeman, Mary C.; Pringle, C.M.; Jackson, C.R.

    2007-01-01

    Cumulatively, headwater streams contribute to maintaining hydrologic connectivity and ecosystem integrity at regional scales. Hydrologic connectivity is the water-mediated transport of matter, energy and organisms within or between elements of the hydrologic cycle. Headwater streams compose over two-thirds of total stream length in a typical river drainage and directly connect the upland and riparian landscape to the rest of the stream ecosystem. Altering headwater streams, e.g., by channelization, diversion through pipes, impoundment and burial, modifies fluxes between uplands and downstream river segments and eliminates distinctive habitats. The large-scale ecological effects of altering headwaters are amplified by land uses that alter runoff and nutrient loads to streams, and by widespread dam construction on larger rivers (which frequently leaves free-flowing upstream portions of river systems essential to sustaining aquatic biodiversity). We discuss three examples of large-scale consequences of cumulative headwater alteration. Downstream eutrophication and coastal hypoxia result, in part, from agricultural practices that alter headwaters and wetlands while increasing nutrient runoff. Extensive headwater alteration is also expected to lower secondary productivity of river systems by reducing stream-system length and trophic subsidies to downstream river segments, affecting aquatic communities and terrestrial wildlife that utilize aquatic resources. Reduced viability of freshwater biota may occur with cumulative headwater alteration, including for species that occupy a range of stream sizes but for which headwater streams diversify the network of interconnected populations or enhance survival for particular life stages. Developing a more predictive understanding of ecological patterns that may emerge on regional scales as a result of headwater alterations will require studies focused on components and pathways that connect headwaters to river, coastal and

  18. Nitrogen-fixing methane-utilizing bacteria

    NARCIS (Netherlands)

    Bont, de J.A.M.

    1976-01-01

    Methane occurs abundantly in nature. In the presence of oxygen this gas may be metabolized by bacteria that are able to use it as carbon and energy source. Several types of bacteria involved in the oxidation of methane have been described in literature. Methane-utilizing bacteria have in

  19. Laser-Based Identification of Pathogenic Bacteria

    Science.gov (United States)

    Rehse, Steven J.

    2009-01-01

    Bacteria are ubiquitous in our world. From our homes, to our work environment, to our own bodies, bacteria are the omnipresent although often unobserved companions to human life. Physicists are typically untroubled professionally by the presence of these bacteria, as their study usually falls safely outside the realm of our typical domain. In the…

  20. Current strategies for improving food bacteria

    NARCIS (Netherlands)

    Kuipers, O P; Buist, Girbe; Kok, Jan

    2000-01-01

    Novel concepts and methodologies are emerging that hold great promise for the directed improvement of food-related bacteria, specifically lactic acid bacteria. Also, the battle against food spoilage and pathogenic bacteria can now be fought more effectively. Here we describe recent advances in

  1. Ecology of mycophagous collimonas bacteria in soil

    NARCIS (Netherlands)

    Höppener-Ogawa, Sachie

    2008-01-01

    Bacteria belonging to the genus Collimonas consist of soil bacteria that can grow at expense of living fungal hyphae i.e. they are mycophagous. This PhD studies deals with the ecology of mycophagous bacteria in soil using collimonads as model organisms. Collimonads were found to be widely

  2. Ecological health in the Nation's streams

    Science.gov (United States)

    Carlisle, Daren M.; Woodside, Michael D.

    2013-01-01

    Aquatic biological communities, which are collections of organisms, are a direct measure of stream health because they indicate the ability of a stream to support life. This fact sheet highlights selected findings of a national assessment of stream health by the National Water-Quality Assessment (NAWQA) Program of the U.S. Geological Survey (USGS). The assessment was unique in that it integrated the condition of three biological communities—algae, macroinvertebrates, and fish—as well as measures of streamflow modification, pesticides, nutrients, and other factors. At least one biological community was altered at 83 percent of assessed streams, and the occurrence of altered communities was highest in urban streams. Streamflows were modified at 86 percent of assessed streams, and increasing severity of streamflow modification was associated with increased occurrence of altered biological communities. Agricultural and urban land use in watersheds may contribute pesticides and nutrients to stream waters, and increasing concentrations of these chemicals were associated with increased occurrence of altered biological communities.

  3. Network Monitoring as a Streaming Analytics Problem

    KAUST Repository

    Gupta, Arpit

    2016-11-02

    Programmable switches make it easier to perform flexible network monitoring queries at line rate, and scalable stream processors make it possible to fuse data streams to answer more sophisticated queries about the network in real-time. Unfortunately, processing such network monitoring queries at high traffic rates requires both the switches and the stream processors to filter the traffic iteratively and adaptively so as to extract only that traffic that is of interest to the query at hand. Others have network monitoring in the context of streaming; yet, previous work has not closed the loop in a way that allows network operators to perform streaming analytics for network monitoring applications at scale. To achieve this objective, Sonata allows operators to express a network monitoring query by considering each packet as a tuple and efficiently partitioning each query between the switches and the stream processor through iterative refinement. Sonata extracts only the traffic that pertains to each query, ensuring that the stream processor can scale traffic rates of several terabits per second. We show with a simple example query involving DNS reflection attacks and traffic traces from one of the world\\'s largest IXPs that Sonata can capture 95% of all traffic pertaining to the query, while reducing the overall data rate by a factor of about 400 and the number of required counters by four orders of magnitude. Copyright 2016 ACM.

  4. Acoustic streaming of a sharp edge.

    Science.gov (United States)

    Ovchinnikov, Mikhail; Zhou, Jianbo; Yalamanchili, Satish

    2014-07-01

    Anomalous acoustic streaming is observed emanating from sharp edges of solid bodies that are vibrating in fluids. The streaming velocities can be orders of magnitude higher than expected from the Rayleigh streaming at similar amplitudes of vibration. Acoustic velocity of fluid relative to a solid body diverges at a sharp edge, giving rise to a localized time-independent body force acting on the fluid. This force results in a formation of a localized jet. Two-dimensional numerical simulations are performed to predict acoustic streaming for low amplitude vibration using two methods: (1) Steady-state solution utilizing perturbation theory and (2) direct transient solution of the Navier-Stokes equations. Both analyses agree with each other and correctly predict the streaming of a sharp-edged vibrating blade measured experimentally. The origin of the streaming can be attributed to the centrifugal force of the acoustic fluid flow around a sharp edge. The dependence of this acoustic streaming on frequency and velocity is examined using dimensional analysis. The dependence law is devised and confirmed by numerical simulations.

  5. Quality models for audiovisual streaming

    Science.gov (United States)

    Thang, Truong Cong; Kim, Young Suk; Kim, Cheon Seog; Ro, Yong Man

    2006-01-01

    Quality is an essential factor in multimedia communication, especially in compression and adaptation. Quality metrics can be divided into three categories: within-modality quality, cross-modality quality, and multi-modality quality. Most research has so far focused on within-modality quality. Moreover, quality is normally just considered from the perceptual perspective. In practice, content may be drastically adapted, even converted to another modality. In this case, we should consider the quality from semantic perspective as well. In this work, we investigate the multi-modality quality from the semantic perspective. To model the semantic quality, we apply the concept of "conceptual graph", which consists of semantic nodes and relations between the nodes. As an typical of multi-modality example, we focus on audiovisual streaming service. Specifically, we evaluate the amount of information conveyed by a audiovisual content where both video and audio channels may be strongly degraded, even audio are converted to text. In the experiments, we also consider the perceptual quality model of audiovisual content, so as to see the difference with semantic quality model.

  6. High Definition Video Streaming Using H.264 Video Compression

    OpenAIRE

    Bechqito, Yassine

    2009-01-01

    This thesis presents high definition video streaming using H.264 codec implementation. The experiment carried out in this study was done for an offline streaming video but a model for live high definition streaming is introduced, as well. Prior to the actual experiment, this study describes digital media streaming. Also, the different technologies involved in video streaming are covered. These include streaming architecture and a brief overview on H.264 codec as well as high definition t...

  7. Fast algorithm for automatically computing Strahler stream order

    Science.gov (United States)

    Lanfear, Kenneth J.

    1990-01-01

    An efficient algorithm was developed to determine Strahler stream order for segments of stream networks represented in a Geographic Information System (GIS). The algorithm correctly assigns Strahler stream order in topologically complex situations such as braided streams and multiple drainage outlets. Execution time varies nearly linearly with the number of stream segments in the network. This technique is expected to be particularly useful for studying the topology of dense stream networks derived from digital elevation model data.

  8. StreamNet, 1999-2000 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Schmidt, Bruce; Roger, Phil; Butterfield, Bart (Pacific States Marine Fisheries Commission, Gladstone, OR)

    2001-09-01

    The StreamNet Project is a cooperative project that provides basic fishery management data in a consistent format across the Columbia Basin region, with some data from outside the region. Specific categories of data are acquired from the multiple data generating agencies in the Columbia Basin, converted into a standardized data exchange format (DEF) and distributed to fish researchers, managers and decision makers directly or through an on-line data retrieval system (www.streamnet.org). The project is funded by the Bonneville Power Administration (BPA) as part of the Northwest Power Planning Council's (NWPPC) Fish and Wildlife Program. This cooperative effort is composed of a region-wide project administered by the Pacific States Marine Fisheries Commission (PSMFC) that is responsible for project management, regional data management and data delivery (Region), plus seven contributing projects within the data generating entities: Columbia River Intertribal Fish Commission (CRITFC); Idaho Department of Fish and Game (IDFG); Montana Fish, Wildlife and Parks (MFWP); Oregon Department of Fish and Wildlife (ODFW); Shoshone-Bannock Tribes; U. S. Fish and Wildlife Service (FWS); and Washington Department of Fish and Wildlife (WDFW). The contributing projects are funded through the StreamNet contract but work within their respective agencies and are referred to here as the agency's StreamNet project (for example, ''IDFG StreamNet'' for Idaho's project). The StreamNet Project provides an important link in the chain of data flow in the Columbia Basin, with specific emphasis on data collected routinely over time by management agencies. Basic fish related data are collected in the field by the various state, tribal and federal agencies in the basin for purposes related to each agency's individual mission and responsibility. As a result, there often is a lack of standardization among agencies in field methodology or data management. To be

  9. StreamNet, annual report FY 2000; ANNUAL

    International Nuclear Information System (INIS)

    Schmidt, Bruce R.

    2001-01-01

    The StreamNet Project is a cooperative project that provides basic fishery management data in a consistent format across the Columbia Basin region, with some data from outside the region. Specific categories of data are acquired from the multiple data generating agencies in the Columbia Basin, converted into a standardized data exchange format (DEF) and distributed to fish researchers, managers and decision makers directly or through an on-line data retrieval system (www.streamnet.org). The project is funded by the Bonneville Power Administration (BPA) as part of the Northwest Power Planning Council's (NWPPC) Fish and Wildlife Program. This cooperative effort is composed of a region-wide project administered by the Pacific States Marine Fisheries Commission (PSMFC) that is responsible for project management, regional data management and data delivery (Region), plus seven contributing projects within the data generating entities: Columbia River Intertribal Fish Commission (CRITFC); Idaho Department of Fish and Game (IDFG); Montana Fish, Wildlife and Parks (MFWP); Oregon Department of Fish and Wildlife (ODFW); Shoshone-Bannock Tribes; U. S. Fish and Wildlife Service (FWS); and Washington Department of Fish and Wildlife (WDFW). The contributing projects are funded through the StreamNet contract but work within their respective agencies and are referred to here as the agency's StreamNet project (for example, ''IDFG StreamNet'' for Idaho's project). The StreamNet Project provides an important link in the chain of data flow in the Columbia Basin, with specific emphasis on data collected routinely over time by management agencies. Basic fish related data are collected in the field by the various state, tribal and federal agencies in the basin for purposes related to each agency's individual mission and responsibility. As a result, there often is a lack of standardization among agencies in field methodology or data management. To be able to utilize data for comparison or

  10. Predicting thermal reference conditions for USA streams and rivers

    Science.gov (United States)

    Hill, Ryan A.; Hawkins, Charles P.; Carlisle, Daren M.

    2013-01-01

    Temperature is a primary driver of the structure and function of stream ecosystems. However, the lack of stream temperature (ST) data for the vast majority of streams and rivers severely compromises our ability to describe patterns of thermal variation among streams, test hypotheses regarding the effects of temperature on macroecological patterns, and assess the effects of altered STs on ecological resources. Our goal was to develop empirical models that could: 1) quantify the effects of stream and watershed alteration (SWA) on STs, and 2) accurately and precisely predict natural (i.e., reference condition) STs in conterminous USA streams and rivers. We modeled 3 ecologically important elements of the thermal regime: mean summer, mean winter, and mean annual ST. To build reference-condition models (RCMs), we used daily mean ST data obtained from several thousand US Geological Survey temperature sites distributed across the conterminous USA and iteratively modeled ST with Random Forests to identify sites in reference condition. We first created a set of dirty models (DMs) that related STs to both natural factors (e.g., climate, watershed area, topography) and measures of SWA, i.e., reservoirs, urbanization, and agriculture. The 3 models performed well (r2 = 0.84–0.94, residual mean square error [RMSE] = 1.2–2.0°C). For each DM, we used partial dependence plots to identify SWA thresholds below which response in ST was minimal. We then used data from only the sites with upstream SWA below these thresholds to build RCMs with only natural factors as predictors (r2 = 0.87–0.95, RMSE = 1.1–1.9°C). Use of only reference-quality sites caused RCMs to suffer modest loss of predictor space and spatial coverage, but this loss was associated with parts of ST response curves that were flat and, therefore, not responsive to further variation in predictor space. We then compared predictions made with the RCMs to predictions made with the DMs with SWA set to 0. For most

  11. Riffle zoobenthos in streams receiving acid mine drainage

    Energy Technology Data Exchange (ETDEWEB)

    Koryak, M; Shapiro, M A; Sykora, J L

    1972-01-01

    The bottom fauna of a stream polluted by acid mine drainage, was studied, using the standard methods of sample collecting. In localities immediately influenced by mine drainage, where very low pH values and high acidities prevail, the effect of acid mine wastes on the ecology and composition of the benthic fauna is, in general, similar to the effect of organic pollution. In these areas we found high numbers of individuals comprised of a few species. In the zones of active neutralization, where iron hydroxides are deposited, species diversity slightly increases but the biomass is very low. The most numerous invertebrates in the stream sections exhibiting high acidity and low pH are midge larvae, especially Tendipes gr. riparius. The number of insect groups present increases steadily with progressive neutralization until crustacea (amphipoda) and oligochaeta appear, indicating considerable improvement in water quality. The supply of desirable benthic fish food (Tendipes ssp.) is very high in the parts of the stream where low pH, high acidity, and high ferrous iron concentrations prevail. Unfortunately, fish cannot survive under these conditions to utilize this abundant food supply. On the other hand, in the less acidic zones, where fish could possibly survive, the deposition of ferric iron drastically diminishes the total biomass of benthic organisms and therefore severely limits fish populations.

  12. Electrochemical/Pyrometallurgical Waste Stream Processing and Waste Form Fabrication

    Energy Technology Data Exchange (ETDEWEB)

    Steven Frank; Hwan Seo Park; Yung Zun Cho; William Ebert; Brian Riley

    2015-07-01

    This report summarizes treatment and waste form options being evaluated for waste streams resulting from the electrochemical/pyrometallurgical (pyro ) processing of used oxide nuclear fuel. The technologies that are described are South Korean (Republic of Korea – ROK) and United States of America (US) ‘centric’ in the approach to treating pyroprocessing wastes and are based on the decade long collaborations between US and ROK researchers. Some of the general and advanced technologies described in this report will be demonstrated during the Integrated Recycle Test (IRT) to be conducted as a part of the Joint Fuel Cycle Study (JFCS) collaboration between US Department of Energy (DOE) and ROK national laboratories. The JFCS means to specifically address and evaluated the technological, economic, and safe guard issues associated with the treatment of used nuclear fuel by pyroprocessing. The IRT will involve the processing of commercial, used oxide fuel to recover uranium and transuranics. The recovered transuranics will then be fabricated into metallic fuel and irradiated to transmutate, or burn the transuranic elements to shorter lived radionuclides. In addition, the various process streams will be evaluated and tested for fission product removal, electrolytic salt recycle, minimization of actinide loss to waste streams and waste form fabrication and characterization. This report specifically addresses the production and testing of those waste forms to demonstrate their compatibility with treatment options and suitability for disposal.

  13. Electrofishing capture probability of smallmouth bass in streams

    Science.gov (United States)

    Dauwalter, D.C.; Fisher, W.L.

    2007-01-01

    Abundance estimation is an integral part of understanding the ecology and advancing the management of fish populations and communities. Mark-recapture and removal methods are commonly used to estimate the abundance of stream fishes. Alternatively, abundance can be estimated by dividing the number of individuals sampled by the probability of capture. We conducted a mark-recapture study and used multiple repeated-measures logistic regression to determine the influence of fish size, sampling procedures, and stream habitat variables on the cumulative capture probability for smallmouth bass Micropterus dolomieu in two eastern Oklahoma streams. The predicted capture probability was used to adjust the number of individuals sampled to obtain abundance estimates. The observed capture probabilities were higher for larger fish and decreased with successive electrofishing passes for larger fish only. Model selection suggested that the number of electrofishing passes, fish length, and mean thalweg depth affected capture probabilities the most; there was little evidence for any effect of electrofishing power density and woody debris density on capture probability. Leave-one-out cross validation showed that the cumulative capture probability model predicts smallmouth abundance accurately. ?? Copyright by the American Fisheries Society 2007.

  14. Indication of pesticide effects and recolonization in streams.

    Science.gov (United States)

    Knillmann, Saskia; Orlinskiy, Polina; Kaske, Oliver; Foit, Kaarina; Liess, Matthias

    2018-07-15

    The agricultural use of pesticides leads to environmentally relevant pesticide concentrations that cause adverse effects on stream ecosystems. These effects on invertebrate community composition can be identified by the bio-indicator SPEAR pesticides . However, refuge areas have been found to partly confound the indicator. On the basis of three monitoring campaigns of 41 sites in Central Germany, we identified 11 refuge taxa. The refuge taxa, mainly characterized by dispersal-based resilience, were observed only nearby uncontaminated stream sections and independent of the level of pesticide pressure. Through incorporation of this information into the revised SPEAR pesticides indicator, the community structure specifically identified the toxic pressure and no longer depended on the presence of refuge areas. With regard to ecosystem functions, leaf litter degradation was predicted by the revised SPEAR pesticides and the median water temperature at a site (R 2  = 0.38, P = 0.003). Furthermore, we designed the bio-indicator SPEAR refuge to quantify the magnitude of general recolonization at a given stream site. We conclude that the taxonomic composition of aquatic invertebrate communities enables a specific indication of anthropogenic stressors and resilience of ecosystems. Copyright © 2018 Elsevier B.V. All rights reserved.

  15. Flume experiments on scour downstream of wood stream restoration structures

    Science.gov (United States)

    Pagliara, Stefano; Kurdistani, Sahameddin Mahmoudi

    2017-02-01

    River restoration aims to improve physical natural form and processes of a river. Techniques to control the riverbed, stabilize channel alignment, protect stream banks, and rebuild the natural habitat are an important part of river restoration projects. Rivers can be stabilized and habitat restored through techniques such as rebuilding meanders and pool-riffle sequences and managing large wood. Structures that limit channel width to accelerate the normal flows through the constricted section are referred to as stream deflectors. Single-wing, double-wing and triangular deflectors are the most commonly used types of this measure. Log-frame deflectors consist of a triangular log frame filled with rock. Deflector constructions singly or in series in low gradient meandering streams, divert base flows toward the center of the channel and, under certain conditions, increase the depth and velocity of flow thereby creating scour pools and enhancing fish habitat. Scour characteristics and morphologies downstream of log-frame deflectors have been analyzed at the hydraulic laboratory of the University of Pisa. All experiments have been carried out in clear water conditions. The results showed that the tailwater depth plays an important role on scour characteristics. In addition, it was experimentally proven that using log-frame deflectors instead of log-deflectors result in a better river bank protection. In this case, for all the tested hydraulic conditions, the scour hole never occurred close to the channel bank. Useful empirical relationships have been proposed in order to evaluate the main features of the scour geometry.

  16. Effect of ionizing radiation on the antigenic composition of typhoid bacteria

    International Nuclear Information System (INIS)

    Sinilova, N.G.; Nikolaeva, L.A.; Tumanyan, M.A.

    1978-01-01

    Changes in the antigenic composition of typhoid bacteria occurring during the exposure of microbial suspension to different doses of gamma radiation ( 60 Co) ranging between 0.5 and 3.0 Mrad were studied. Immunoelectrophoresis in agar was used to determine the antigenic composition of different samples of irradiated bacteria. The antigenic composition of bacteria irradiated with doses up to 2.5 Mrad was found to be similar to that of non-irradiated bacteria. Antigens demonstrated by means of Vi, H and O antisera are preserved in these bacteria. However, all irradiated bacteria in general slightly differ from non-irradiated bacteria; this is manifest in a different configuration and position of the precipitation lines in the cathodic part of the immunophoreograms. The content of the component migrating rapidly towards the cathode, evidently the O antigen in the R form, in the irradiated bacteria increases with the dose of radiation. No new serologically active substances, non-existent in non-irradiated bacteria, were found to appear in the process of irradiation. (author)

  17. AIDS: "it's the bacteria, stupid!".

    Science.gov (United States)

    Broxmeyer, Lawrence; Cantwell, Alan

    2008-11-01

    Acid-fast tuberculous mycobacterial infections are common in AIDS and are regarded as secondary "opportunistic infections." According to the National Institute of Allergy and Infectious Diseases, TB is the major attributable cause of death in AIDS patients. Could such bacteria play a primary or causative role in AIDS? Certainly, In screening tests for HIV, there is frequent, up to 70%, cross-reactivity, between the gag and pol proteins of HIV and patients with mycobacterial infections such as tuberculosis. By 1972, five years before gays started dying in the U.S., Rolland wrote Genital Tuberculosis, a Forgotten Disease? And ironically, in 1979, on the eve of AIDS recognition, Gondzik and Jasiewicz showed that even in the laboratory, genitally infected tubercular male guinea pigs could infect healthy females through their semen by an HIV-compatible ratio of 1 in 6 or 17%, prompting him to warn his patients that not only was tuberculosis a sexually transmitted disease, but also the necessity of the application of suitable contraceptives, such as condoms, to avoid it. Gondzik's solution and date of publication are chilling; his findings significant. Since 1982 Cantwell et al found acid-fast bacteria closely related to tuberculosis (TB) and atypical tuberculosis in AIDS tissue. On the other hand molecular biologist and virologist Duesberg, who originally defined retroviral ultrastructure, has made it clear that HIV is not the cause of AIDS and that the so-called AIDS retrovirus has never been isolated in its pure state. Dr. Etienne de Harven, first to examine retroviruses under the electron, agrees. In 1993 HIV co-discoverer Luc Montagnier reported on cell-wall-deficient (CWD) bacteria which he called "mycoplasma" in AIDS tissue. He suspected these as a necessary "co-factor" for AIDS. Remarkably, Montagnier remained silent on Cantwell's reports of acid-fast bacteria which could simulate "mycoplasma" in AIDS tissue. Mattman makes clear that the differentiation between

  18. Biological responses to acidification reversal in Cumbrian streamwaters - invertebrates and bacteria

    Energy Technology Data Exchange (ETDEWEB)

    Tipping, E.; Bass, J.A.B.; Blackburn, J.H.; Hardie, D.J.; Mallinson, H.E.H.; Simon, B.M.

    2000-07-01

    The stream waters of the upper Duddon catchment, situated in the south-west of the English Lake District, have been acidified as a result of acid deposition. However, there is now strong chemical evidence for recovery, as the acidity of deposition decreases. The present study was carried out in order to investigate possible improvements in biological response. This report describes the results of sampling and analysis, carried out to obtain biological data in 1999 for comparison with data obtained in the 1960s and early 1970s for invertebrates and in the 1980s for bacteria. Macro-invertebrate studies were carried out in five streams which had records from the 1960s and 1970s, and which covered a range of pH (ca. 5 to ca. 7). Significantly more macro-invertebrate taxa were found in all the streams in 1999. The macro-invertebrate diversity was greater in 1999, as judged by the Margalef diversity index. There have been significant increases in the values of a macro-invertebrate based acidification index between the 1960s/1970s and the present, consistent with a decrease in stream water acidity. Species of the bacterium Cytophaga, which participates in the decomposition of plant litter, are absent from streams of low pH. Cytophaga was detected in a stream from which it had previously absent, which is consistent with an increase in pH. Taking the results of the present study together with those of previous ones showing that stream and lake acidity in Cumbria have decreased over the last 20-30 years, it can be concluded that decreases in acid deposition (of S) have led to improvements in water quality, and thereby to positive biological responses. (author)

  19. A morphological comparison of narrow, low-gradient streams traversing wetland environments to alluvial streams.

    Science.gov (United States)

    Jurmu, Michael C

    2002-12-01

    Twelve morphological features from research on alluvial streams are compared in four narrow, low-gradient wetland streams located in different geographic regions (Connecticut, Indiana, and Wisconsin, USA). All four reaches differed in morphological characteristics in five of the features compared (consistent bend width, bend cross-sectional shape, riffle width compared to pool width, greatest width directly downstream of riffles, and thalweg location), while three reaches differed in two comparisons (mean radius of curvature to width ratio and axial wavelength to width ratio). The remaining five features compared had at least one reach where different characteristics existed. This indicates the possibility of varying morphology for streams traversing wetland areas further supporting the concept that the unique qualities of wetland environments might also influence the controls on fluvial dynamics and the development of streams. If certain morphological features found in streams traversing wetland areas differ from current fluvial principles, then these varying features should be incorporated into future wetland stream design and creation projects. The results warrant further research on other streams traversing wetlands to determine if streams in these environments contain unique morphology and further investigation of the impact of low-energy fluvial processes on morphological development. Possible explanations for the morphology deviations in the study streams and some suggestions for stream design in wetland areas based upon the results and field observations are also presented.

  20. Time-Based Data Streams: Fundamental Concepts for a Data Resource for Streams

    Energy Technology Data Exchange (ETDEWEB)

    Beth A. Plale

    2009-10-10

    Real time data, which we call data streams, are readings from instruments, environmental, bodily or building sensors that are generated at regular intervals and often, due to their volume, need to be processed in real time. Often a single pass is all that can be made on the data, and a decision to discard or keep the instance is made on the spot. Too, the stream is for all practical purposes indefinite, so decisions must be made on incomplete knowledge. This notion of data streams has a different set of issues from a file, for instance, that is byte streamed to a reader. The file is finite, so the byte stream is becomes a processing convenience more than a fundamentally different kind of data. Through the duration of the project we examined three aspects of streaming data: the first, techniques to handle streaming data in a distributed system organized as a collection of web services, the second, the notion of the dashboard and real time controllable analysis constructs in the context of the Fermi Tevatron Beam Position Monitor, and third and finally, we examined provenance collection of stream processing such as might occur as raw observational data flows from the source and undergoes correction, cleaning, and quality control. The impact of this work is severalfold. We were one of the first to advocate that streams had little value unless aggregated, and that notion is now gaining general acceptance. We were one of the first groups to grapple with the notion of provenance of stream data also.

  1. How and Why Does Stream Water Temperature Vary at Small Spatial Scales in a Headwater Stream?

    Science.gov (United States)

    Morgan, J. C.; Gannon, J. P.; Kelleher, C.

    2017-12-01

    The temperature of stream water is controlled by climatic variables, runoff/baseflow generation, and hyporheic exchange. Hydrologic conditions such as gaining/losing reaches and sources of inflow can vary dramatically along a stream on a small spatial scale. In this work, we attempt to discern the extent that the factors of air temperature, groundwater inflow, and precipitation influence stream temperature at small spatial scales along the length of a stream. To address this question, we measured stream temperature along the perennial stream network in a 43 ha catchment with a complex land use history in Cullowhee, NC. Two water temperature sensors were placed along the stream network on opposite sides of the stream at 100-meter intervals and at several locations of interest (i.e. stream junctions). The forty total sensors recorded the temperature every 10 minutes for one month in the spring and one month in the summer. A subset of sampling locations where stream temperature was consistent or varied from one side of the stream to the other were explored with a thermal imaging camera to obtain a more detailed representation of the spatial variation in temperature at those sites. These thermal surveys were compared with descriptions of the contributing area at the sample sites in an effort to discern specific causes of differing flow paths. Preliminary results suggest that on some branches of the stream stormflow has less influence than regular hyporheic exchange, while other tributaries can change dramatically with stormflow conditions. We anticipate this work will lead to a better understanding of temperature patterns in stream water networks. A better understanding of the importance of small-scale differences in flow paths to water temperature may be able to inform watershed management decisions in the future.

  2. Device for continuous analysis of a stream of material

    International Nuclear Information System (INIS)

    Krampe, G.

    1981-01-01

    A radioactive radiation source and a radioactive detector are associated, as a unit, with equipment for conveying coal or other material in a continuous stream. One part of the conveying path or the whole path lies in the irradiation zone of the source, and the detector receives the radiation reflected by the material. The radiation source and the detector are carried by impacting means situated on the conveying path in such a way as to deflect the material from a portion of the conveying means travelling in a first direction, on to another portion travelling in a second direction intersecting the first direction. (author)

  3. Streaming and digital media understanding the business and technology

    CERN Document Server

    Rayburn, Dan

    2007-01-01

    Steaming and Digital Media gives you a concise and direct analysis to understand a scalable, profitable venture, as well as the common and hidden pitfalls to avoid in your business. By focusing on both the business implications and technical differences between online video and traditional broadcast distribution, you will learn how to gain significant time-to-market and cost-saving advantages by effectively using streaming and digital media technologies. As part of the NAB Executive Technology Briefing series, the book is geared towards the manager or executive and no technical prerequisite is

  4. Groundwater flow and mixing in a wetland–stream system

    DEFF Research Database (Denmark)

    Karan, Sachin; Engesgaard, Peter Knudegaard; Zibar, Majken Caroline Looms

    2013-01-01

    steady-state groundwater model that was calibrated against average head observations. The model results were tested against groundwater fluxes determined from streambed temperature measurements. Discharge varied up to one order of magnitude across the stream and the model was successful in capturing...... in the top of the aquifer and immediately underneath the streambed no NO3- was detected deeper within the aquifer. An inverse relationship between NO3- and SO42- suggests that pyrite oxidation takes place in the deeper parts of the aquifer. Simulated flow path lines showed very different origins for deeper...

  5. Potential role of bacteria packaging by protozoa in the persistence and transmission of pathogenic bacteria

    OpenAIRE

    Denoncourt, Alix M.; Paquet, Valérie E.; Charette, Steve J.

    2014-01-01

    Many pathogenic bacteria live in close association with protozoa. These unicellular eukaryotic microorganisms are ubiquitous in various environments. A number of protozoa such as amoebae and ciliates ingest pathogenic bacteria, package them usually in membrane structures, and then release them into the environment. Packaged bacteria are more resistant to various stresses and are more apt to survive than free bacteria. New evidence indicates that protozoa and not bacteria control the packaging...

  6. Environmental transcriptome analysis reveals physiological differences between biofilm and planktonic modes of life of the iron oxidizing bacteria Leptospirillum spp. in their natural microbial community

    Directory of Open Access Journals (Sweden)

    Parro Víctor

    2010-06-01

    Full Text Available Abstract Background Extreme acidic environments are characterized by their high metal content and lack of nutrients (oligotrophy. Macroscopic biofilms and filaments usually grow on the water-air interface or under the stream attached to solid substrates (streamers. In the Río Tinto (Spain, brown filaments develop under the water stream where the Gram-negative iron-oxidizing bacteria Leptospirillum spp. (L. ferrooxidans and L. ferriphilum and Acidithiobacillus ferrooxidans are abundant. These microorganisms play a critical role in bioleaching processes for industrial (biominery and environmental applications (acid mine drainage, bioremediation. The aim of this study was to investigate the physiological differences between the free living (planktonic and the sessile (biofilm associated lifestyles of Leptospirillum spp. as part of its natural extremely acidophilic community. Results Total RNA extracted from environmental samples was used to determine the composition of the metabolically active members of the microbial community and then to compare the biofilm and planktonic environmental transcriptomes by hybridizing to a genomic microarray of L. ferrooxidans. Genes up-regulated in the filamentous biofilm are involved in cellular functions related to biofilm formation and maintenance, such as: motility and quorum sensing (mqsR, cheAY, fliA, motAB, synthesis of cell wall structures (lnt, murA, murB, specific proteases (clpX/clpP, stress response chaperons (clpB, clpC, grpE-dnaKJ, groESL, etc. Additionally, genes involved in mixed acid fermentation (poxB, ackA were up-regulated in the biofilm. This result, together with the presence of small organic acids like acetate and formate (1.36 mM and 0.06 mM respectively in the acidic (pH 1.8 water stream, suggests that either L. ferrooxidans or other member of the microbial community are producing acetate in the acidophilic biofilm under microaerophilic conditions. Conclusions Our results indicate that the

  7. Environmental transcriptome analysis reveals physiological differences between biofilm and planktonic modes of life of the iron oxidizing bacteria Leptospirillum spp. in their natural microbial community.

    Science.gov (United States)

    Moreno-Paz, Mercedes; Gómez, Manuel J; Arcas, Aida; Parro, Víctor

    2010-06-24

    Extreme acidic environments are characterized by their high metal content and lack of nutrients (oligotrophy). Macroscopic biofilms and filaments usually grow on the water-air interface or under the stream attached to solid substrates (streamers). In the Río Tinto (Spain), brown filaments develop under the water stream where the Gram-negative iron-oxidizing bacteria Leptospirillum spp. (L. ferrooxidans and L. ferriphilum) and Acidithiobacillus ferrooxidans are abundant. These microorganisms play a critical role in bioleaching processes for industrial (biominery) and environmental applications (acid mine drainage, bioremediation). The aim of this study was to investigate the physiological differences between the free living (planktonic) and the sessile (biofilm associated) lifestyles of Leptospirillum spp. as part of its natural extremely acidophilic community. Total RNA extracted from environmental samples was used to determine the composition of the metabolically active members of the microbial community and then to compare the biofilm and planktonic environmental transcriptomes by hybridizing to a genomic microarray of L. ferrooxidans. Genes up-regulated in the filamentous biofilm are involved in cellular functions related to biofilm formation and maintenance, such as: motility and quorum sensing (mqsR, cheAY, fliA, motAB), synthesis of cell wall structures (lnt, murA, murB), specific proteases (clpX/clpP), stress response chaperons (clpB, clpC, grpE-dnaKJ, groESL), etc. Additionally, genes involved in mixed acid fermentation (poxB, ackA) were up-regulated in the biofilm. This result, together with the presence of small organic acids like acetate and formate (1.36 mM and 0.06 mM respectively) in the acidic (pH 1.8) water stream, suggests that either L. ferrooxidans or other member of the microbial community are producing acetate in the acidophilic biofilm under microaerophilic conditions. Our results indicate that the acidophilic filaments are dynamic structures

  8. Authentication for Propulsion Test Streaming Video

    Data.gov (United States)

    National Aeronautics and Space Administration — A streaming video system was developed and implemented at SSC to support various propulsion projects at SSC. These projects included J-2X and AJ-26 rocket engine...

  9. Web Audio/Video Streaming Tool

    Science.gov (United States)

    Guruvadoo, Eranna K.

    2003-01-01

    In order to promote NASA-wide educational outreach program to educate and inform the public of space exploration, NASA, at Kennedy Space Center, is seeking efficient ways to add more contents to the web by streaming audio/video files. This project proposes a high level overview of a framework for the creation, management, and scheduling of audio/video assets over the web. To support short-term goals, the prototype of a web-based tool is designed and demonstrated to automate the process of streaming audio/video files. The tool provides web-enabled users interfaces to manage video assets, create publishable schedules of video assets for streaming, and schedule the streaming events. These operations are performed on user-defined and system-derived metadata of audio/video assets stored in a relational database while the assets reside on separate repository. The prototype tool is designed using ColdFusion 5.0.

  10. Noise Prediction Module for Offset Stream Nozzles

    Science.gov (United States)

    Henderson, Brenda S.

    2011-01-01

    A Modern Design of Experiments (MDOE) analysis of data acquired for an offset stream technology was presented. The data acquisition and concept development were funded under a Supersonics NRA NNX07AC62A awarded to Dimitri Papamoschou at University of California, Irvine. The technology involved the introduction of airfoils in the fan stream of a bypass ratio (BPR) two nozzle system operated at transonic exhaust speeds. The vanes deflected the fan stream relative to the core stream and resulted in reduced sideline noise for polar angles in the peak jet noise direction. Noise prediction models were developed for a range of vane configurations. The models interface with an existing ANOPP module and can be used or future system level studies.

  11. Watershed impervious cover relative to stream location

    Data.gov (United States)

    U.S. Environmental Protection Agency — Estimates of watershed (12-digit huc) impervious cover and impervious cover near streams and water body shorelines for three dates (2001, 2006, 2011) using NLCD...

  12. Radiation streaming with SAM-CE

    International Nuclear Information System (INIS)

    De Gangi, N.; Cohen, M.O.; Waluschka, E.; Steinberg, H.A.

    1980-01-01

    The SAM-CE Monte Carlo code has been employed to calculate doses, due to neutron streaming, on the operating floor and other locations of the Millstone Unit II Nuclear Power Facility. Calculated results were compared against measured doses

  13. Stream biomonitoring using macroinvertebrates around the globe

    NARCIS (Netherlands)

    Buss, Daniel F.; Carlisle, Daren M.; Chon, Tae Soo; Culp, Joseph; Harding, Jon S.; Keizer-Vlek, H.E.; Robinson, Wayne A.; Strachan, Stephanie; Thirion, Christa; Hughes, Robert M.

    2015-01-01

    Water quality agencies and scientists are increasingly adopting standardized sampling methodologies because of the challenges associated with interpreting data derived from dissimilar protocols. Here, we compare 13 protocols for monitoring streams from different regions and countries around the

  14. Reactive solute transport in acidic streams

    Science.gov (United States)

    Broshears, R.E.

    1996-01-01

    Spatial and temporal profiles of Ph and concentrations of toxic metals in streams affected by acid mine drainage are the result of the interplay of physical and biogeochemical processes. This paper describes a reactive solute transport model that provides a physically and thermodynamically quantitative interpretation of these profiles. The model combines a transport module that includes advection-dispersion and transient storage with a geochemical speciation module based on MINTEQA2. Input to the model includes stream hydrologic properties derived from tracer-dilution experiments, headwater and lateral inflow concentrations analyzed in field samples, and a thermodynamic database. Simulations reproduced the general features of steady-state patterns of observed pH and concentrations of aluminum and sulfate in St. Kevin Gulch, an acid mine drainage stream near Leadville, Colorado. These patterns were altered temporarily by injection of sodium carbonate into the stream. A transient simulation reproduced the observed effects of the base injection.

  15. Biochemistry, physiology and biotechnology of sulfate-reducing bacteria.

    Science.gov (United States)

    Barton, Larry L; Fauque, Guy D

    2009-01-01

    Chemolithotrophic bacteria that use sulfate as terminal electron acceptor (sulfate-reducing bacteria) constitute a unique physiological group of microorganisms that couple anaerobic electron transport to ATP synthesis. These bacteria (220 species of 60 genera) can use a large variety of compounds as electron donors and to mediate electron flow they have a vast array of proteins with redox active metal groups. This chapter deals with the distribution in the environment and the major physiological and metabolic characteristics of sulfate-reducing bacteria (SRB). This chapter presents our current knowledge of soluble electron transfer proteins and transmembrane redox complexes that are playing an essential role in the dissimilatory sulfate reduction pathway of SRB of the genus Desulfovibrio. Environmentally important activities displayed by SRB are a consequence of the unique electron transport components or the production of high levels of H(2)S. The capability of SRB to utilize hydrocarbons in pure cultures and consortia has resulted in using these bacteria for bioremediation of BTEX (benzene, toluene, ethylbenzene and xylene) compounds in contaminated soils. Specific strains of SRB are capable of reducing 3-chlorobenzoate, chloroethenes, or nitroaromatic compounds and this has resulted in proposals to use SRB for bioremediation of environments containing trinitrotoluene and polychloroethenes. Since SRB have displayed dissimilatory reduction of U(VI) and Cr(VI), several biotechnology procedures have been proposed for using SRB in bioremediation of toxic metals. Additional non-specific metal reductase activity has resulted in using SRB for recovery of precious metals (e.g. platinum, palladium and gold) from waste streams. Since bacterially produced sulfide contributes to the souring of oil fields, corrosion of concrete, and discoloration of stonework is a serious problem, there is considerable interest in controlling the sulfidogenic activity of the SRB. The

  16. Side Stream Filtration for Cooling Towers

    Energy Technology Data Exchange (ETDEWEB)

    None

    2012-10-20

    This technology evaluation assesses side stream filtration options for cooling towers, with an objective to assess key attributes that optimize energy and water savings along with providing information on specific technology and implementation options. This information can be used to assist Federal sites to determine which options may be most appropriate for their applications. This evaluation provides an overview of the characterization of side stream filtration technology, describes typical applications, and details specific types of filtration technology.

  17. Stream sediment sampling and analysis. Final report

    International Nuclear Information System (INIS)

    Means, J.L.; Voris, P.V.; Headington, G.L.

    1986-04-01

    The objectives were to sample and analyze sediments from upstream and downstream locations (relative to the Goodyear Atomic plant site) of three streams for selected pollutants. The three streams sampled were the Scioto River, Big Beaver Creek, and Big Run Creek. Sediment samples were analyzed for EPA's 129 priority pollutants (Clean Water Act) as well as isotopic uranium ( 234 U, 235 U, and 238 U) and technetium-99

  18. Landscaping Considerations for Urban Stream Restoration Projects

    National Research Council Canada - National Science Library

    Bailey, Pam

    2004-01-01

    ... after restoration and its functionality for public use. The landscaping component of such stream and riparian restoration projects must be emphasized given its importance of visual success and public perception. The purpose of this technical note is to address landscaping considerations associated with urban stream and riparian restoration projects, and provide ideas to managers for enhancing the visual appeal and aesthetic qualities of urban projects.

  19. Rotenone persistence model for montane streams

    Science.gov (United States)

    Brown, Peter J.; Zale, Alexander V.

    2012-01-01

    The efficient and effective use of rotenone is hindered by its unknown persistence in streams. Environmental conditions degrade rotenone, but current label instructions suggest fortifying the chemical along a stream based on linear distance or travel time rather than environmental conditions. Our objective was to develop models that use measurements of environmental conditions to predict rotenone persistence in streams. Detailed measurements of ultraviolet radiation, water temperature, dissolved oxygen, total dissolved solids (TDS), conductivity, pH, oxidation–reduction potential (ORP), substrate composition, amount of organic matter, channel slope, and travel time were made along stream segments located between rotenone treatment stations and cages containing bioassay fish in six streams. The amount of fine organic matter, biofilm, sand, gravel, cobble, rubble, small boulders, slope, pH, TDS, ORP, light reaching the stream, energy dissipated, discharge, and cumulative travel time were each significantly correlated with fish death. By using logistic regression, measurements of environmental conditions were paired with the responses of bioassay fish to develop a model that predicted the persistence of rotenone toxicity in streams. This model was validated with data from two additional stream treatment reaches. Rotenone persistence was predicted by a model that used travel time, rubble, and ORP. When this model predicts a probability of less than 0.95, those who apply rotenone can expect incomplete eradication and should plan on fortifying rotenone concentrations. The significance of travel time has been previously identified and is currently used to predict rotenone persistence. However, rubble substrate, which may be associated with the degradation of rotenone by adsorption and volatilization in turbulent environments, was not previously considered.

  20. Hydraulic Aspects of Vegetation Maintanence in Streams

    DEFF Research Database (Denmark)

    Larsen, Torben; Vestergaard, Kristian

    1991-01-01

    This paper describes the importance of the underwater vegetation on Danish streams and some of the consequences of vegetation maintenance. the influence of the weed on the hydraulic conditions is studied through experiments in a smaller stream and the effect of cutting channels through the weed...... is measured. A method for predicting the Manning's n as a function of the discharge conditions is suggested, and also a working hypothesis for predictions of the effect of channel cutting is presented....

  1. Extending the benchmark simulation model no2 with processes for nitrous oxide production and side-stream nitrogen removal

    DEFF Research Database (Denmark)

    Boiocchi, Riccardo; Sin, Gürkan; Gernaey, Krist V.

    2015-01-01

    In this work the Benchmark Simulation Model No.2 is extended with processes for nitrous oxide production and for side-stream partial nitritation/Anammox (PN/A) treatment. For these extensions the Activated Sludge Model for Greenhouse gases No.1 was used to describe the main waterline, whereas...... the Complete Autotrophic Nitrogen Removal (CANR) model was used to describe the side-stream (PN/A) treatment. Comprehensive simulations were performed to assess the extended model. Steady-state simulation results revealed the following: (i) the implementation of a continuous CANR side-stream reactor has...... increased the total nitrogen removal by 10%; (ii) reduced the aeration demand by 16% compared to the base case, and (iii) the activity of ammonia-oxidizing bacteria is most influencing nitrous oxide emissions. The extended model provides a simulation platform to generate, test and compare novel control...

  2. Endocarditis caused by anaerobic bacteria.

    Science.gov (United States)

    Kestler, M; Muñoz, P; Marín, M; Goenaga, M A; Idígoras Viedma, P; de Alarcón, A; Lepe, J A; Sousa Regueiro, D; Bravo-Ferrer, J M; Pajarón, M; Costas, C; García-López, M V; Hidalgo-Tenorio, C; Moreno, M; Bouza, E

    2017-10-01

    Infective endocarditis (IE) caused by anaerobic bacteria is a rare and poorly characterized disease. Most data reported in the literature are from case reports [1-3]. Therefore, we assessed the situation of anaerobic IE (AIE) in Spain using the database of the Spanish Collaboration on Endocarditis (GAMES). We performed a prospective study from 2008 to 2016 in 26 Spanish centers. We included 2491 consecutive cases of definite IE (Duke criteria). Anaerobic bacteria caused 22 cases (0.9%) of definite IE. Median age was 66 years (IQR, 56-73), and 19 (86.4%) patients were men. Most patients (14 [63.6%]) had prosthetic valve IE and all episodes were left-sided: aortic valves, 12 (54.5%); and mitral valves, 8 (36.4%). The most common pathogens were Propionibacterium acnes (14 [63.6%]), Lactobacillus spp (3 [13.63%]), and Clostridium spp. (2 [9.0%]), and the infection was mainly odontogenic. Fifteen of the 22 patients (68.2%) underwent cardiac surgery. Mortality was 18.2% during admission and 5.5% after 1 year of follow-up. When patients with AIE were compared with the rest of the cohort, we found that although those with AIE had a similar age and Charlson comorbidity index, they were more likely to have community-acquired IE (86.4% vs. 60.9%, p = 0.01), have undergone cardiac surgery (68.2% vs 48.7% p = 0.06), and have had lower mortality rates during admission (18.2% vs. 27.3%). IE due to anaerobic bacteria is an uncommon disease that affects mainly prosthetic valves and frequently requires surgery. Otherwise, there are no major differences between AIE and IE caused by other microorganisms. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Bacteria and vampirism in cinema.

    Science.gov (United States)

    Castel, O; Bourry, A; Thévenot, S; Burucoa, C

    2013-09-01

    A vampire is a non-dead and non-alive chimerical creature, which, according to various folklores and popular superstitions, feeds on blood of the living to draw vital force. Vampires do not reproduce by copulation, but by bite. Vampirism is thus similar to a contagious disease contracted by intravascular inoculation with a suspected microbial origin. In several vampire films, two real bacteria were staged, better integrated than others in popular imagination: Yersinia pestis and Treponema pallidum. Bacillus vampiris was created for science-fiction. These films are attempts to better define humans through one of their greatest fears: infectious disease. Copyright © 2013 Elsevier Masson SAS. All rights reserved.

  4. Information Behavior on Social Live Streaming Services

    Directory of Open Access Journals (Sweden)

    Scheibe, Katrin

    2016-06-01

    Full Text Available In the last few years, a new type of synchronous social networking services (SNSs has emerged—social live streaming services (SLSSs. Studying SLSSs is a new and exciting research field in information science. What information behaviors do users of live streaming platforms exhibit? In our empirical study we analyzed information production behavior (i.e., broadcasting as well as information reception behavior (watching streams and commenting on them. We conducted two quantitative investigations, namely an online survey with YouNow users (N = 123 and observations of live streams on YouNow (N = 434. YouNow is a service with video streams mostly made by adolescents for adolescents. YouNow users like to watch streams, to chat while watching, and to reward performers by using emoticons. While broadcasting, there is no anonymity (as in nearly all other WWW services. Synchronous SNSs remind us of the film The Truman Show, as anyone has the chance to consciously broadcast his or her own life real-time.

  5. STREAMS - Supporting Underrepresented Groups in Earth Sciences

    Science.gov (United States)

    Carvalho-Knighton, K.; Johnson, A.

    2009-12-01

    In Fall 2008, STREAMS (Supporting Talented and Remarkable Environmental And Marine Science students) Scholarship initiative began at the University of South Florida St. Petersburg, the only public university in Pinellas County. STREAMS is a partnership between the University of South Florida St. Petersburg’s (USFSP) Environmental Science and Policy Program and University of South Florida’s (USF) College of Marine Science. The STREAMS Student Scholarship Program has facilitated increased recruitment, retention, and graduation of USFSP environmental science and USF marine science majors. The STREAMS program has increased opportunities for minorities and women to obtain undergraduate and graduate degrees, gain valuable research experience and engage in professional development activities. STREAMS scholars have benefited from being mentored by USFSP and USF faculty and as well as MSPhDs students and NSF Florida-Georgia LSAMP Bridge to Doctorate graduate fellows. In addition, STREAMS has facilitated activities designed to prepare student participants for successful Earth system science-related careers. We will elucidate the need for this initiative and vision for the collaboration.

  6. REVISED STREAM CODE AND WASP5 BENCHMARK

    International Nuclear Information System (INIS)

    Chen, K

    2005-01-01

    STREAM is an emergency response code that predicts downstream pollutant concentrations for releases from the SRS area to the Savannah River. The STREAM code uses an algebraic equation to approximate the solution of the one dimensional advective transport differential equation. This approach generates spurious oscillations in the concentration profile when modeling long duration releases. To improve the capability of the STREAM code to model long-term releases, its calculation module was replaced by the WASP5 code. WASP5 is a US EPA water quality analysis program that simulates one-dimensional pollutant transport through surface water. Test cases were performed to compare the revised version of STREAM with the existing version. For continuous releases, results predicted by the revised STREAM code agree with physical expectations. The WASP5 code was benchmarked with the US EPA 1990 and 1991 dye tracer studies, in which the transport of the dye was measured from its release at the New Savannah Bluff Lock and Dam downstream to Savannah. The peak concentrations predicted by the WASP5 agreed with the measurements within ±20.0%. The transport times of the dye concentration peak predicted by the WASP5 agreed with the measurements within ±3.6%. These benchmarking results demonstrate that STREAM should be capable of accurately modeling releases from SRS outfalls

  7. Controlling the acoustic streaming by pulsed ultrasounds.

    Science.gov (United States)

    Hoyos, Mauricio; Castro, Angélica

    2013-01-01

    We propose a technique based on pulsed ultrasounds for controlling, reducing to a minimum observable value the acoustic streaming in closed ultrasonic standing wave fluidic resonators. By modifying the number of pulses and the repetition time it is possible to reduce the velocity of the acoustic streaming with respect to the velocity generated by the continuous ultrasound mode of operation. The acoustic streaming is observed at the nodal plane where a suspension of 800nm latex particles was focused by primary radiation force. A mixture of 800nm and 15μm latex particles has been also used for showing that the acoustic streaming is hardly reduced while primary and secondary forces continue to operate. The parameter we call "pulse mode factor" i.e. the time of applied ultrasound divided by the duty cycle, is found to be the adequate parameter that controls the acoustic streaming. We demonstrate that pulsed ultrasound is more efficient for controlling the acoustic streaming than the variation of the amplitude of the standing waves. Copyright © 2012 Elsevier B.V. All rights reserved.

  8. South Stream Project and the Ukrainian Factor

    Directory of Open Access Journals (Sweden)

    Roxana Ioana Banciu

    2015-03-01

    Full Text Available The paper seeks to develop an analysis of the South Stream project in view of the Ukrainian crisis. We cannot put aside the internal factor as Ukraine is facing serious internal issues such as corruption and instability, therefore Russia’s invasion of Ukraine can not be simply ignored in this pipeline project. The article uses mostly facts that happened throughout last years, as well as for and against declarations in the case of the South Stream project and its mother Russia. When we hear about South Stream, we think of Russia and since 2007, this pipeline has encouraged Putin’s faith in energy superpower. A good point to start with was to gather all declarations since then and cover all actions that regard the South Stream game. In Russian foreign policy for the South Stream race, Soft Power was used more than enough and it has recently made room for Hard Power, which is the Ukraine never ending episode. Insights of the South Stream story have been lately related both softly and hardly, this is the reason why I have chosen to analyse both sides in order to complete the energy landscape.

  9. Online feature selection with streaming features.

    Science.gov (United States)

    Wu, Xindong; Yu, Kui; Ding, Wei; Wang, Hao; Zhu, Xingquan

    2013-05-01

    We propose a new online feature selection framework for applications with streaming features where the knowledge of the full feature space is unknown in advance. We define streaming features as features that flow in one by one over time whereas the number of training examples remains fixed. This is in contrast with traditional online learning methods that only deal with sequentially added observations, with little attention being paid to streaming features. The critical challenges for Online Streaming Feature Selection (OSFS) include 1) the continuous growth of feature volumes over time, 2) a large feature space, possibly of unknown or infinite size, and 3) the unavailability of the entire feature set before learning starts. In the paper, we present a novel Online Streaming Feature Selection method to select strongly relevant and nonredundant features on the fly. An efficient Fast-OSFS algorithm is proposed to improve feature selection performance. The proposed algorithms are evaluated extensively on high-dimensional datasets and also with a real-world case study on impact crater detection. Experimental results demonstrate that the algorithms achieve better compactness and higher prediction accuracy than existing streaming feature selection algorithms.

  10. Impact of stream restoration on flood waves

    Science.gov (United States)

    Sholtes, J.; Doyle, M.

    2008-12-01

    Restoration of channelized or incised streams has the potential to reduce downstream flooding via storing and dissipating the energy of flood waves. Restoration design elements such as restoring meanders, reducing slope, restoring floodplain connectivity, re-introducing in-channel woody debris, and re-vegetating banks and the floodplain have the capacity to attenuate flood waves via energy dissipation and channel and floodplain storage. Flood discharge hydrographs measured up and downstream of several restored reaches of varying stream order and located in both urban and rural catchments are coupled with direct measurements of stream roughness at various stages to directly measure changes to peak discharge, flood wave celerity, and dispersion. A one-dimensional unsteady flow routing model, HEC-RAS, is calibrated and used to compare attenuation characteristics between pre and post restoration conditions. Modeled sensitivity results indicate that a restoration project placed on a smaller order stream demonstrates the highest relative reduction in peak discharge of routed flood waves compared to one of equal length on a higher order stream. Reductions in bed slope, extensions in channel length, and increases in channel and floodplain roughness follow restoration placement with the watershed in relative importance. By better understanding how design, scale, and location of restored reaches within a catchment hydraulically impact flood flows, this study contributes both to restoration design and site decision making. It also quantifies the effect of reach scale stream restoration on flood wave attenuation.

  11. Motorcycle Parts

    Science.gov (United States)

    1993-01-01

    An article in NASA Tech Briefs describing a vacuum bagging process for forming composite parts helped a small Oklahoma Company to improve its manufacturing process. President of Performance Extremes, Larry Ortega, and his partners make motorcycle parts from carbon/epoxy to reduce weight. Using vacuum bags, parts have a better surface and fewer voids inside. When heat used in the vacuum bag process caused deformation upon cooling, a solution found in another tech brief solved the problem. A metal plate inside the vacuum bag made for more even heat transfer. A third article described a simple procedure for repairing loose connector pins, which the company has also utilized.

  12. The Stream-Catchment (StreamCat) and Lake-Catchment ...

    Science.gov (United States)

    Background/Question/MethodsLake and stream conditions respond to both natural and human-related landscape features. Characterizing these features within contributing areas (i.e., delineated watersheds) of streams and lakes could improve our understanding of how biological conditions vary spatially and improve the use, management, and restoration of these aquatic resources. However, the specialized geospatial techniques required to define and characterize stream and lake watersheds has limited their widespread use in both scientific and management efforts at large spatial scales. We developed the StreamCat and LakeCat Datasets to model, predict, and map the probable biological conditions of streams and lakes across the conterminous US (CONUS). Both StreamCat and LakeCat contain watershed-level characterizations of several hundred natural (e.g., soils, geology, climate, and land cover) and anthropogenic (e.g., urbanization, agriculture, mining, and forest management) landscape features for ca. 2.6 million stream segments and 376,000 lakes across the CONUS, respectively. These datasets can be paired with field samples to provide independent variables for modeling and other analyses. We paired 1,380 stream and 1,073 lake samples from the USEPAs National Aquatic Resource Surveys with StreamCat and LakeCat and used random forest (RF) to model and then map an invertebrate condition index and chlorophyll a concentration, respectively. Results/ConclusionsThe invertebrate

  13. Documentation of acceptable knowledge for Los Alamos National Laboratory Plutonium Facility TRU waste stream

    International Nuclear Information System (INIS)

    Montoya, A.J.; Gruetzmacher, K.M.; Foxx, C.L.; Rogers, P.Z.

    1998-03-01

    Characterization of transuranic waste from the LANL Plutonium Facility for certification and transportation to WIPP includes the use of acceptable knowledge as specified in the WIPP Quality Assurance Program Plan. In accordance with a site specific procedure, documentation of acceptable knowledge for retrievably stored and currently generated transuranic waste streams is in progress at LANL. A summary overview of the TRU waste inventory is complete and documented in the Sampling Plan. This document also includes projected waste generation, facility missions, waste generation processes, flow diagrams, times, and material inputs. The second part of acceptable knowledge documentation consists of assembling more detailed acceptable knowledge information into auditable records and is expected to require several years to complete. These records for each waste stream must support final assignment of waste matrix parameters, EPA hazardous waste numbers, and radionuclide characterization. They must also include a determination whether waste streams are defense waste streams for compliance with the WIPP Land Withdrawal Act. The LANL Plutonium Facility's mission is primarily plutonium processing in basic special nuclear material (SNM) research activities to support national defense and energy programs. It currently has about 100 processes ranging from SNM recovery from residues to development of plutonium 238 heat sources for space applications. Its challenge is to characterize and certify waste streams from such diverse and dynamic operations using acceptable knowledge. This paper reports the progress on the certification of the first of these waste streams to the WIPP WAC

  14. Spatio-temporal variation of stream-aquifer interaction: Effect of a weir construction in Korea

    Science.gov (United States)

    Lee, Hyeonju; Koo, Min-Ho; Kim, Kisu; Kim, Yongcheol

    2015-04-01

    The Four Major Rivers Restoration Project was conducted to secure sufficient water resources, introduce comprehensive flood control measures, and improve water quality while restore the river ecosystem in Korea. The dredging of river bed and the installation of 16 weirs were done in Han, Geum, Yeongsan, and Nakdong rivers from late 2010 to early 2012 as a part of the project. Groundwater data obtained from 213 groundwater monitoring wells near the four major rivers were used to analyze the impacts of weir construction on the nearby groundwater flow system. The groundwater level and chemical characteristics were analyzed to investigate how the groundwater flow system and water quality changed after the weir construction. The results showed that groundwater level rose immediately following the rise of stream stage after the weir construction. Also, the hydrologic condition of the stream in some upland of the weirs was changed from a gaining to a losing stream. Consequently, the direction of groundwater flow was changed from perpendicular to parallel to the stream, and it swapped the groundwater in the downstream of the weir for the water recharged from the stream. Considering the results, some groundwater quality is expected to be changed and become similar to that of the stream, although the change has been not observed yet. Therefore, both further monitoring of the groundwater quality and hydrogeochemical analysis are required for quantitatively evaluating the effect of the weir.

  15. Wildfire Effects on In-stream Nutrient Processing and Hydrologic Transport

    Science.gov (United States)

    Rhea, A.; Covino, T. P.; Rhoades, C.; Fegel, T.

    2017-12-01

    In many forests throughout the Western U.S., drought, climate change, and growing fuel loads are contributing to increased fire frequency and severity. Wildfires can influence watershed nutrient retention as they fundamentally alter the biological composition and physical structure in upland landscapes, riparian corridors, and stream channels. While numerous studies have documented substantial short-term increases in stream nutrient concentrations and export (particularly reactive nitrogen, N) following forest fires, the long-term implications for watershed nutrient cycling remain unclear. For example, recent work indicates that nitrate concentrations and export can remain elevated for a decade or more following wildfire, yet the controls on these processes are unknown. In this research, we use empirical observations from nutrient tracer injections, nutrient diffusing substrates, and continuous water quality monitoring to isolate biological and physical controls on nutrient export across a burn-severity gradient. Tracer results demonstrate substantial stream-groundwater exchange, but little biological nutrient uptake in burned streams. This in part explains patterns of elevated nutrient export. Paired nutrient diffusing substrate experiments allow us to further investigate shifts in N, phosphorus, and carbon limitation that may suppress post-fire stream nutrient uptake. By isolating the mechanisms that reduce the capacity of fire-affected streams to retain and transform nutrient inputs, we can better predict dynamics in post-fire water quality and help prioritize upland and riparian restoration.

  16. Impacts of groundwater metal loads from bedrock fractures on water quality of a mountain stream.

    Science.gov (United States)

    Caruso, Brian S; Dawson, Helen E

    2009-06-01

    Acid mine drainage and metal loads from hardrock mines to surface waters is a significant problem in the western USA and many parts of the world. Mines often occur in mountain environments with fractured bedrock aquifers that serve as pathways for metals transport to streams. This study evaluates impacts from current and potential future groundwater metal (Cd, Cu, and Zn) loads from fractures underlying the Gilt Edge Mine, South Dakota, on concentrations in Strawberry Creek using existing flow and water quality data and simple mixing/dilution mass balance models. Results showed that metal loads from bedrock fractures to the creek currently contribute water quality is achieved upstream in Strawberry Creek, fracture metal loads would be water quality standards exceedances once groundwater with elevated metals concentrations in the aquifer matrix migrates to the fractures and discharges to the stream. Potential future metal loads from an upstream fracture would contribute a small proportion of the total load relative to current loads in the stream. Cd has the highest stream concentrations relative to standards. Even if all stream water was treated to remove 90% of the Cd, the standard would still not be achieved. At a fracture farther downstream, the Cd standard can only be met if the upstream water is treated achieving a 90% reduction in Cd concentrations and the median stream flow is maintained.

  17. Spatiotemporal dynamics of spring and stream water chemistry in a high-mountain area

    International Nuclear Information System (INIS)

    Zelazny, Miroslaw; Astel, Aleksander; Wolanin, Anna; Malek, Stanislaw

    2011-01-01

    The present study deals with the application of the self-organizing map (SOM) technique in the exploration of spatiotemporal dynamics of spring and stream water samples collected in the Chocholowski Stream Basin located in the Tatra Mountains (Poland). The SOM-based classification helped to uncover relationships between physical and chemical parameters of water samples and factors determining the quality of water in the studied high-mountain area. In the upper part of the Chocholowski Stream Basin, located on the top of the crystalline core of the Tatras, concentrations of the majority of ionic substances were the lowest due to limited leaching. Significantly higher concentration of ionic substances was detected in spring and stream samples draining sedimentary rocks. The influence of karst-type springs on the quality of stream water was also demonstrated. - Highlights: → We use SOM approach to explore physiochemical data for mountain waters. → Geologic structure and hydrological events impact water chemistry. → Limited leaching, typical of crystalline core, reflects in low water mineralization. → Sedimentary rocks are susceptible for leaching. → Eutrophication has not been shown to be a threat in the Chocholowska Valley. - Spatiotemporal dynamics of spring and stream water chemistry in unique high-mountain area was evaluated by the self-organizing map technique.

  18. Documentation of acceptable knowledge for LANL Plutonium Facility transuranic waste streams

    International Nuclear Information System (INIS)

    Montoya, A.J.; Gruetzmacher, K.; Foxx, C.; Rogers, P.S.Z.

    1998-01-01

    Characterization of transuranic waste from the LANL Plutonium Facility for certification and transportation to WIPP includes the use of acceptable knowledge as specified in the WIPP Quality Assurance Program Plan. In accordance with a site-specific procedure, documentation of acceptable knowledge for retrievably stored and currently generated transuranic waste streams is in progress at LANL. A summary overview of the transuranic waste inventory is complete and documented in the Sampling Plan. This document also includes projected waste generation, facility missions, waste generation processes, flow diagrams, times, and material inputs. The second part of acceptable knowledge documentation consists of assembling more detailed acceptable knowledge information into auditable records and is expected to require several years to complete. These records for each waste stream must support final assignment of waste matrix parameters, EPA hazardous waste numbers, and radionuclide characterization. They must also include a determination whether waste streams are defense waste streams for compliance with the WIPP Land Withdrawal Act. The LANL Plutonium Facility's mission is primarily plutonium processing in basic special nuclear material (SNM) research activities to support national defense and energy programs. It currently has about 100 processes ranging from SNM recovery from residues to development of plutonium 238 heat sources for space applications. Its challenge is to characterize and certify waste streams from such diverse and dynamic operations using acceptable knowledge. This paper reports the progress on the certification of the first of these waste streams to the WIPP WAC

  19. Simulation and comparison of stream power in-channel and on the floodplain in a German lowland area

    Directory of Open Access Journals (Sweden)

    Song Song

    2014-06-01

    Full Text Available Extensive lowland floodplains cover substantial parts of the glacially formed landscape of Northern Germany. Stream power is recognized as a force of formation and development of the river morphology and an interaction system between channel and floodplain. In order to understand the effects of the river power and flood power, HEC-RAS models were set up for ten river sections in the Upper Stör catchment, based on a 1 m digital elevation model and field data, sampled during a moderate water level period (September, 2011, flood season (January, 2012 and dry season (April, 2012. The models were proven to be highly efficient and accurate through the seasonal roughness modification. The coefficients of determination (R2 of the calibrated models were 0.90, 0.90, 0.93 and 0.95 respectively. Combined with the continuous and long-term data support from SWAT model, the stream power both in-channel and on the floodplain was analysed. Results show that the 10-year-averaged discharge and unit stream power were around 1/3 of bankfull discharge and unit power, and the 10-year-peak discharge and unit stream power were nearly 1.6 times the bankfull conditions. Unit stream power was proportional to the increase of stream discharge, while the increase rate of unit in-channel stream power was 3 times higher than that of unit stream power on the floodplain. Finally, the distribution of the hydraulic parameters under 10-years-peak discharge conditions was shown, indicating that only 1-10% of flow stream was generated by floodplain flow, but 40-75% volume of water was located on the floodplain. The variation of the increasing rate of the stream power was dominated by the local roughness height, while the stream power distributed on the floodplain mainly depended on the local slope of the sub-catchment.

  20. Effects of forest harvesting on summer stream temperatures in New Brunswick, Canada: an inter-catchment, multiple-year comparison

    Directory of Open Access Journals (Sweden)

    C. P.-A. Bourque

    2001-01-01

    Full Text Available This paper presents a pre- and post-harvest comparison of stream temperatures collected in five neighbouring streams (sub-catchments over a period of five years (1994-1998. The aim of the study was to determine whether land cover changes from clear cutting in areas outside forest buffer zones (applied to streams >0.5 m wide might contribute to an increase in summer mean stream temperatures in buffered streams downslope by infusion of warmed surface and sub-surface water into the streams. Specific relationships were observed in all five forest streams investigated. To assist in the analysis, several spatially-relevant variables, such as land cover change, mid-summer potential solar radiation, flow accumulation, stream location and slope of the land were determined, in part, from existing aerial photographs, GIS-archived forest inventory data and a digital terrain model of the study area. Spatial calculations of insolation levels for July 15th were used as an index of mid-summer solar heating across sub-catchments. Analysis indicated that prior to the 1995 harvest, differences in stream temperature could be attributed to (i topographic position and catchment-to-sun orientation, (ii the level of cutting that occurred in the upper catchment prior to the start of the study, and (iii the average slope within harvested areas. Compared to the pre-harvest mean stream temperatures in 1994, mean temperatures in the three streams downslope from the 1995 harvest areas increased by 0.3 to 0.7°C (representing a 4-8% increase; p-value of normalised temperatures Keywords: terrain attributes, solar radiation, land cover, forest buffers, New Brunswick regulations, spatial modelling, DEM, forest covertypes