Museum material reveals a frog parasite emergence after the invasion of the cane toad in Australia

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Phalen David N

2010-06-01

Full Text Available Abstract Background A parasite morphologically indistinguishable from Myxidium immersum (Myxozoa: Myxosporea found in gallbladders of the invasive cane toad (Bufo marinus was identified in Australian frogs. Because no written record exists for such a parasite in Australian endemic frogs in 19th and early 20th century, it was assumed that the cane toad introduced this parasite. While we cannot go back in time ourselves, we investigated whether material at the museum of natural history could be used to retrieve parasites, and whether they were infected at the time of their collection (specifically prior to and after the cane toad translocation to Australia in 1935. Results Using the herpetological collection at the Australian Museum we showed that no myxospores were found in any animals (n = 115 prior to the cane toad invasion (1879-1935. The green and golden bell frog (Litoria aurea, the Peron's tree frog (Litoria peronii, the green tree frog (Litoria caerulea and the striped marsh frog (Limnodynastes peronii were all negative for the presence of the parasite using microscopy of the gallbladder content and its histology. These results were sufficient to conclude that the population was free from this disease (at the expected minimum prevalence of 5% at 99.7% confidence level using the 115 voucher specimens in the Australian Museum. Similarly, museum specimens (n = 29 of the green and golden bell frog from New Caledonia, where it was introduced in 19th century, did not show the presence of myxospores. The earliest specimen positive for myxospores in a gallbladder was a green tree frog from 1966. Myxospores were found in eight (7.1%, n = 112 frogs in the post cane toad introduction period. Conclusion Australian wildlife is increasingly under threat, and amphibian decline is one of the most dramatic examples. The museum material proved essential to directly support the evidence of parasite emergence in Australian native frogs. This parasite can be

Histopathological changes in the liver and kidney tissues of marsh frog (Pelophylax ridibundus induced by the action of Talstar 10EC insecticide

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Alina PĂUNESCU

2012-05-01

Full Text Available Histopathological biomarkers of toxicity in frog organs are a useful indicator of environmental pollution. The frogs were experimentally exposed to sub-lethal concentrations (0.5mg bifenthrin/g of body weight of Talstar 10EC for 3 weeks. The present study proves its toxic potential in terms of the damages in liver and kidney level. Tissues were normal in the control group. Hepatic lesions in frog exposed to bifenthrin were characterized by vacuolation of hepatocytes and nuclear pycnosis, perisinusoidal and periportal fibrosis, dilatation of Disse space and sinusoid capillaries, presence of cellular infiltrates. Kidney lesions consisted of dilation of Bowman’s space, tubular necrosis, and epithelial cells shows pycnotic nuclei, discrete degree of interstitial edema.

Marsh dieback, loss, and recovery mapped with satellite optical, airborne polarimetric radar, and field data

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Ramsey, Elijah W.; Rangoonwala, Amina; Chi, Zhaohui; Jones, Cathleen E.; Bannister, Terri

2014-01-01

Landsat Thematic Mapper and Satellite Pour l'Observation de la Terre (SPOT) satellite based optical sensors, NASA Uninhabited Aerial Vehicle synthetic aperture radar (UAVSAR) polarimetric SAR (PolSAR), and field data captured the occurrence and the recovery of an undetected dieback that occurred between the summers of 2010, 2011, and 2012 in the Spartina alterniflora marshes of coastal Louisiana. Field measurements recorded the dramatic biomass decrease from 2010 to 2011 and a biomass recovery in 2012 dominated by a decrease of live biomass, and the loss of marsh as part of the dieback event. Based on an established relationship, the near-infrared/red vegetation index (VI) and site-specific measurements delineated a contiguous expanse of marsh dieback encompassing 6649.9 ha of 18,292.3 ha of S. alterniflora marshes within the study region. PolSAR data were transformed to variables used in biophysical mapping, and of this variable suite, the cross-polarization HV (horizontal send and vertical receive) backscatter was the best single indicator of marsh dieback and recovery. HV backscatter exhibited substantial and significant changes over the dieback and recovery period, tracked measured biomass changes, and significantly correlated with the live/dead biomass ratio. Within the context of regional trends, both HV and VI indicators started higher in pre-dieback marshes and exhibited substantially and statistically higher variability from year to year than that exhibited in the non-dieback marshes. That distinct difference allowed the capturing of the S. alterniflora marsh dieback and recovery; however, these changes were incorporated in a regional trend exhibiting similar but more subtle biomass composition changes.

Frog Statistics

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Whole Frog Project and Virtual Frog Dissection Statistics wwwstats output for January 1 through duplicate or extraneous accesses. For example, in these statistics, while a POST requesting an image is as well. Note that this under-represents the bytes requested. Starting date for following statistics

Exposure of northern leopard frogs in the Green Bay ecosystem to polychlorinated biphenyls, polychlorinated dibenzo-p-dioxins, and polychlorinated dibenzofurans is measured by direct chemistry but not hepatic ethoxyresorufin-O-deethylase activity

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Huang, Y.W.; Karasov, W.H.; Patnode, K.A.; Jefcoate, C.R.

1999-10-01

The authors measured concentrations of polychlorinated biphenyls (PCBs), polychlorinated dibenzo-p-dioxins (PCDDs), and polychlorinated dibenzofurans (PCDFs) in northern leopard frogs collected from the Green Bay ecosystem and explored the catalytic activity of hepatic cytochrome P450-associated monooxygenase (P450 enzyme) as a biomarker for exposure to aryl hydrocarbon receptor (AhR) agonists. The two hypotheses tested were PCH concentrations in northern leopard frogs would be positively correlated with sediment polychlorinated hydrocarbon (PCH) levels in wetland habitats along a contamination gradient and hepatic ethoxyresorufin-O-deethylase (EROD) activity of northern leopard frogs, which is presumably mediated by aryl hydrocarbon receptor (AhR), would be positively correlated with PCH concentrations in frog carcasses from different collection sites. In 1994 and 1995, frogs from seven sites along the lower Fox River and Green Bay, USA, were assayed for hepatic EROD activities and whole carcass concentrations of PCBs, PCDDs, and PCDFs. Tissue total PCB concentrations ranging from 3 to 154 ng/g were significantly correlated with sediment PCB levels. Only one PCDD and two PCDFs at concentrations of 6 to 8 pg/g were found in the frogs collected with frog body weight and was similar among sites except for Peter's Marsh. No significant correlation was found between EROD activity and carcass PCB concentration. This result was consistent with the fact that the frogs collected from the Green Bay ecosystem had relatively low PCB concentrations compared with what was required for induction in the laboratory.

Pseudacris triseriata (western chorus frog) and Rana sylvatica (wood frog) chytridiomycosis

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Rittman, S.E.; Muths, E.; Green, D.E.

2003-01-01

The chytrid fungus Batrachochytrium dendrobatidis is a known pathogen of anuran amphibians, and has been correlated with amphibian die-offs worldwide (Daszak et. al. 1999. Emerging Infectious Diseases 5:735-748). In Colorado, B. dendrobatidis has infected Boreal toads (Bufo boreas) (Muths et. al., in review) and has been identified on museum specimens of northern leopard frogs (Rana pipiens) (Carey et. al. 1999. Develop. Comp. Immunol. 23:459-472). We report the first verified case of chytrid fungus in chorus frogs (Pseudacris triseriata) and wood frogs (Rana sylvatica) in the United States. We collected seven P. triseriata, and two adult and two juvenile R. sylvatica in the Kawuneeche Valley in Rocky Mountain National Park (RMNP) during June 2001. These animals were submitted to the National Wildlife Health Center (NWHC) as part of an amphibian health evaluation in RMNP. Chorus frogs were shipped in one container. Wood frog adults and juveniles were shipped in two separate containers. Histological examinations of all chorus frogs and 3 of 4 wood frogs were positive for chytrid fungus infection. The fourth (adult) wood frog was too decomposed for meaningful histology. Histological findings consisted of multifocally mild to diffusely severe infections of the epidermis of the ventrum and hindlimb digital skin. Chytrid thalli were confined to the thickened epidermis (hyperkeratosis), were spherical to oval, and occasional thalli contained characteristic discharge pores or zoospores (Green and Kagarise Sherman 1999. J. Herpetol 35:92-103; Fellers et al. 2001. Copeia 2001:945-953). We cannot confirm that all specimens carried the fungus at collection, because infection may have spread from one individual to all other individuals in each container during transport. Further sampling of amphibians in Kawuneeche Valley is warranted to determine the rate of infection and mortality in these populations.

Tidal Marsh Outwelling of Dissolved Organic Matter and Resulting Temporal Variability in Coastal Water Optical and Biogeochemical Properties

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Tzortziou, Maria; Neale, Patrick J.; Megonigal, J. Patrick; Butterworth, Megan; Jaffe, Rudolf; Yamashita, Youhei

2010-01-01

Coastal wetlands are highly dynamic environments at the land-ocean interface where human activities, short-term physical forcings and intense episodic events result in high biological and chemical variability. Long being recognized as among the most productive ecosystems in the world, tidally-influenced coastal marshes are hot spots of biogeochemical transformation and exchange. High temporal resolution observations that we performed in several marsh-estuarine systems of the Chesapeake Bay revealed significant variability in water optical and biogeochemical characteristics at hourly time scales, associated with tidally-driven hydrology. Water in the tidal creek draining each marsh was sampled every hour during several semi-diurnal tidal cycles using ISCO automated samplers. Measurements showed that water leaving the marsh during ebbing tide was consistently enriched in dissolved organic carbon (DOC), frequently by more than a factor of two, compared to water entering the marsh during flooding tide. Estimates of DOC fluxes showed a net DOC export from the marsh to the estuary during seasons of both low and high biomass of marsh vegetation. Chlorophyll amounts were typically lower in the water draining the marsh, compared to that entering the marsh during flooding tide, suggesting that marshes act as transformers of particulate to dissolved organic matter. Moreover, detailed optical and compositional analyses demonstrated that marshes are important sources of optically and chemically distinctive, relatively complex, high molecular weight, aromatic-rich and highly colored dissolved organic compounds. Compared to adjacent estuarine waters, marsh-exported colored dissolved organic matter (CDOM) was characterized by considerably stronger absorption (more than a factor of three in some cases), larger DOC-specific absorption, lower exponential spectral slope, larger fluorescence signal, lower fluorescence per unit absorbance, and higher fluorescence at visible wavelengths

Will Restored Tidal Marshes Be Sustainable?

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Michelle Orr

2003-10-01

Full Text Available We assess whether or not restored marshes in the San Francisco Estuary are expected to be sustainable in light of future landscape scale geomorphic processes given typical restored marsh conditions. Our assessment is based on a review of the literature, appraisal of monitoring data for restored marshes, and application of vertical accretion modeling of organic and inorganic sedimentation. Vertical accretion modeling suggests that salt marshes in San Pablo Bay will be sustainable for moderate relative sea level rise (3 to 5 mm yr-1 and average sediment supply (c. 100 mg L-1. Accelerated relative sea level rise (above 6 mm yr-1 and/or reduced sediment supply (50 mg L-1 will cause lowering of the marsh surface relative to the tide range and may cause shifts from high to low marsh vegetation by the year 2100. Widespread conversion of marsh to mudflat-"ecological drowning"-is not expected within this time frame. Marshes restored at lower elevations necessary to aid the natural development of channel systems (c. 0.5 m below mean higher high water are predicted to accrete to high marsh elevations by the year 2100 for moderate relative sea level rise and sediment supply conditions. Existing rates of sediment accretion in restored fresh water tidal marshes of the Delta of greater than 9 mm yr-1 and slightly lower drowning elevations suggest that these marshes will be resilient against relatively high rates of sea level rise. Because of higher rates of organic production, fresh water marshes are expected to be less sensitive to reduced sediment availability than salt marshes. The ultimate long-term threat to the sustainability of tidal marshes is the interruption of coastal rollover-the process by which landward marsh expansion in response to sea level rise compensates for shoreline erosion. Bay front development now prevents most landward marsh expansion, while shoreline erosion is expected to accelerate as sea level rises.

From frog integument to human skin: dermatological perspectives from frog skin biology

NARCIS (Netherlands)

Haslam, I.S.; Roubos, E.W.; Mangoni, M.L.; Yoshizato, K.; Vaudry, H.; Kloepper, J.E.; Pattwell, D.M.; Maderson, P.F.A.; Paus, R.

2014-01-01

For over a century, frogs have been studied across various scientific fields, including physiology, embryology, neuroscience, (neuro)endocrinology, ecology, genetics, behavioural science, evolution, drug development, and conservation biology. In some cases, frog skin has proven very successful as a

Anfíbios Anuros do Distrito Federal The Frogs of the Federal District of Brazil

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Bertha Lutz

1954-03-01

Full Text Available The frogs of the Federal District of Brazil are listed and discussed as to habit, biology and ecology. The F. D is situated 22° 54' 24" S. & 43° 10' 21" W Gr. and comprises 1.356 km². Its topography includes sea-shore, maritime scrub, lagoons, plains and marsh, open slopes, forested mountains and great heads of rock. Three thousand feet of altitude are attained at two points. Fifty two different frogs occur in the F.D. Three fifths of them live in open country. Two fifths of these have never been found above the plains; the others range higher but mostly in open country. Their environment offers conditions suitable for average tadpoles and adults. these frogs are more or less unspecialized. There are six genera and thirty species. Two thirds of the latter belong to the type genera of the large neotropical families Bufonidae, Leptodactylidae and Hylidae. Only in the maritime scrub formation are conditions somewhat different. Water for average tadpoles is provided by the lagoons. The xerophytism of the vegetation is, however, so marked that bromeliads growing on the ground provide almost the only appropriate shelter for adult tree-frogs used to sleeping upright on the vegetation. One large Hylid genus lives entirely in them. It is casque-headed and phragmotic, shutting the lumen of the leaf-cup with head used as a plug. Another large Hylid genus shows a lesser degree of the same specialization. (Lutz A & Lutz B, 1939 II. One genus with two species is entirely saxicolous; it lives on wet ledges of rock at all phases of its life history. (B. Lutz 1948. The other two fifths of the frogs from F. D. are montane forest forms. Their environment offers numerous and varied biotopes and is near optimum for adults. There is,however, hardly any standing water available for larvae. These frogs are ecologically diversified. They also show a general trend towards spawning in the adult biotipe, which leads to delayed hatching, semi-aquatic and terrestrial

Comparative pathology and ecological implications of two myxosporean parasites in native Australian frogs and the invasive cane toad.

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Ashlie Hartigan

Full Text Available Myxosporean parasites Cystodiscus axonis and C. australis are pathogens of native and exotic Australian frog species. The pathology and ecological outcomes of infection with these parasites were investigated in this study. Gliosis was correlated to Cystodiscus axonis plasmodia in the brains of (9/60 tadpoles and (3/9 adult endangered Green and golden bell frogs using ordinal regression. Severe host reactions to C. axonis (haemorrhage, necrosis, and vasulitis were observed in the brains of threatened Southern bell frogs (8/8, critically endangered Booroolong frogs (15/44 and Yellow spotted bell frogs (3/3. Severe brain lesions were associated with behavioural changes, neurological dysfunction, and spontaneous death. Both C. axonis and C. australis develop in the bile ducts of tadpoles, the plasmodia were significantly associated with biliary hyperplasia, inflammation and the loss of hepatocytes in (34/72 Green and golden bell frog tadpoles using ordinal regression. These lesions were so severe that in some cases 70% of the total liver was diseased. Normal liver function in tadpoles is necessary for metamorphosis, metabolism, and immune function. We postulate that this extensive liver damage would have significant host health impacts. Severe hepatic myxosporidiosis was more prevalent in tadpoles examined in autumn and winter (overwintered, suggestive of delayed metamorphosis in infected tadpoles, which would have serious flow-on effects in small populations. We compared the sensitivity of histopathology and species-specific PCR in the detection of C. australis and C. axonis. PCR was determined to be the most sensitive method (detection limit 1 myxospore equivalent of ribosomal DNA. Histology, however, had the advantage of assessing the impact of the parasite on the host. It was concluded that these parasites have the potential for significant ecological impacts, because of their high prevalence of infection and their ability to cause disease in

Diversification of African tree frogs (genus Leptopelis) in the highlands of Ethiopia.

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Reyes-Velasco, Jacobo; Manthey, Joseph D; Freilich, Xenia; Boissinot, Stéphane

2018-05-01

The frog genus Leptopelis is composed of ~50 species that occur across sub-Saharan Africa. The majority of these frogs are typically arboreal; however, a few species have evolved a fossorial lifestyle. Most species inhabit lowland forests, but a few species have adapted to high elevations. Five species of Leptopelis occupy the Ethiopian highlands and provide a good opportunity to study the evolutionary transition from an arboreal to a fossorial lifestyle, as well as the diversification in this biodiversity hot spot. We sequenced 14 nuclear and three mitochondrial genes, and generated thousands of SNPs from ddRAD sequencing to study the evolutionary relationships of Ethiopian Leptopelis. The five species of highland Leptopelis form a monophyletic group, which diversified during the late Miocene and Pliocene. We found strong population structure in the fossorial species L. gramineus, with levels of genetic differentiation between populations similar to those found between arboreal species. This could indicate that L. gramineus is a complex of cryptic species. We propose that after the original colonization of the Ethiopian highlands by the ancestor of the L. gramineus group, episodes of vicariance fragmented the ancestral populations of this group. We also report the re-evolution of arboreality in L. susanae, which evolved from a fossorial ancestor, a rare ecological switch in frogs that had previously been reported only once. © 2018 John Wiley & Sons Ltd.

The Observation of Frog Species at State University of Malang as a Preliminary Effort on Frog Conservation

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Dian Ratri Wulandari

2013-04-01

Full Text Available Frog is an amphibian which is widely spread around the world. Indonesia houses 450 species which represent 11% of frog species in the world. In Java Island alone, there live 42 species of frogs and toads. Frogs can be used as an environment indicator in that the presence of frog in a particular place indicates that the place stays natural and unpolluted. The 1st Campus of State University of Malang, which is located in the heart of Malang District, has been developing rapidly currently. Thus, it requires the construction of new various facilities to support its huge activities. Extensive construction can be destructive even damaging to the habitat of frog, which potentially threats the frog’s life, if it does not take the environmental impact into careful consideration. This study is aimed to identify the species of frog which survives at State University of Malang with, particularly the frog species found in 1995. Species identification was conducted by observing the morphological character. This study found that there were four species with three species remained survived in 1995; those were Duttaphrynus melanostictus, Polypedates leucomystax, and Kaloula baleta; and one new species called Rana chalconota. This study also revealed that there were four species which were extinct; those were Fejervarya cancrivora, Fejervarya limnocharis, Ingerophrynus biporcatus, and Occidoziga lima. This situation shows the decreasing amount of species from 7 to 4 within the last 17 years. This result indicates that there is a serious environmental degradation which causes the losing of frog habitats. Further research is needed to study the ecological condition changing in order to save the frog species.

Ecogeomorphology of Spartina patens-dominated tidal marshes: Soil organic matter accumulation, marsh elevation dynamics, and disturbance

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Cahoon, D.R.; Ford, M.A.; Hensel, P.F.; Fagherazzi, Sergio; Marani, Marco; Blum, Linda K.

2004-01-01

Marsh soil development and vertical accretion in Spartina patens (Aiton) Muhl.-dominated tidal marshes is largely dependent on soil organic matter accumulation from root-rhizome production and litter deposition. Yet there are few quantitative data sets on belowground production and the relationship between soil organic matter accumulation and soil elevation dynamics for this marsh type. Spartina patens marshes are subject to numerous stressors, including sea-level rise, water level manipulations (i.e., flooding and draining) by impoundments, and prescribed burning. These stressors could influence long-term marsh sustainability by their effect on root production, soil organic matter accumulation, and soil elevation dynamics. In this review, we summarize current knowledge on the interactions among vegetative production, soil organic matter accumulation and marsh elevation dynamics, or the ecogeomorphology, of Spartina patens-dominated tidal marshes. Additional studies are needed of belowground production/decomposition and soil elevation change (measured simultaneously) to better understand the links among soil organic matter accumulation, soil elevation change, and disturbance in this marsh type. From a management perspective, we need to better understand the impacts of disturbance stressors, both lethal and sub-lethal, and the interactive effect of multiple stressors on soil elevation dynamics in order to develop better management practices to safeguard marsh sustainability as sea level rises.

Biosphere 2's Marsh Biome

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Molnar, Jennifer; Goodridge, Kelven

1997-01-01

The Marsh Biome, which was modeled after the mangroves and marshes of southwest Florida, has an area of 441.2 sq m separated into three hydrologically independent sections: the Freshwater, Oligohaline and Salt Marshes. The divisions are made based on their salinity (approximately 0, 4, and 34 ppt. respectively), but they also contain different biological communities. The Freshwater and Oligohaline Marshes are mostly filled with various grasses and several trees, while the Salt Marsh houses regions of red, black, and white mangroves (Rhizophora mangle, Avicennia germinans, and Languncularia racemosa respectively). Overall, there are an estimated 80 species of plants within the biome. Water in the Salt Marsh follows a meandering stream from the algal turf scrubbers (apparatuses that clean the water of its nutrients and heavy metals while increasing dissolved oxygen levels) which have an outlet in the Salt Marsh section near sites 4 and 5 to the Fringing Red Mangrove section. The sections of the Salt Marsh are separated by walls of concrete with openings to allow the stream to flow through. Throughout this study, conducted through the months of June and July, many conditions within the biome remained fairly constant. The temperature was within a degree or two of 25 C, mostly depending on whether the sample site was in direct sunlight or shaded. The pH throughout the Salt Marsh was 8.0 +/- 0.2, and the lower salinity waters only dropped below this soon after rains. The water rdepth and dissolved oxygen varied, however, between sites.

Hydrology of Fritchie Marsh, coastal Louisiana

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Kuniansky, E.L.

1985-01-01

Fritchie Marsh, near Slidell, Louisiana, is being considered as a disposal site for sewage effluent. A two-dimensional, finite element, surface water modeling systems was used to solve the shallow water equations for flow. Factors affecting flow patterns are channel locations, inlets, outlets, islands, marsh vegetation, marsh geometry, stage of the West Pearl River, flooding over the lower Pearl River basin, gravity tides, wind-induced currents, and sewage discharge to the marsh. Four steady-state simulations were performed for two hydrologic events at two rates of sewage discharge. The events, near tide with no wind or rain and neap tide with a tide differential across the marsh, were selected as worst-case events for sewage effluent dispersion and were assumed as steady state events. Because inflows and outflows to the marsh are tidally affected, steady state simulations cannot fully define the hydraulic characteristics of the marsh for all hydrologic events. Model results and field data indicate that, during near tide with little or no rain, large parts of the marsh are stagnant; and sewage effluent, at existing and projected flows, has minimal effect on marsh flows. (USGS)

Prey specialization and diet of frogs in Borneo

OpenAIRE

Ahlm, Kristoffer

2015-01-01

Earlier studies of the diet of frogs indicate that most adult frogs are mainly insectivorous. Overall, frogs are viewed more as generalists than specialists in terms of their diet. However, despite earlier studies, there are still gaps in our knowledge regarding what frogs tend to eat and the degree of specialization. The aim of this study was to investigate the diet choice of frogs in a tropical ecosystem. The present study was conducted in a well-known hotspot for frogs with 66 of the 156 k...

Sea level driven marsh expansion in a coupled model of marsh erosion and migration

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Kirwan, Matthew L.; Walters, David C.; Reay, William G.; Carr, Joel

2016-01-01

Coastal wetlands are among the most valuable ecosystems on Earth, where ecosystem services such as flood protection depend nonlinearly on wetland size and are threatened by sea level rise and coastal development. Here we propose a simple model of marsh migration into adjacent uplands and couple it with existing models of seaward edge erosion and vertical soil accretion to explore how ecosystem connectivity influences marsh size and response to sea level rise. We find that marsh loss is nearly inevitable where topographic and anthropogenic barriers limit migration. Where unconstrained by barriers, however, rates of marsh migration are much more sensitive to accelerated sea level rise than rates of edge erosion. This behavior suggests a counterintuitive, natural tendency for marsh expansion with sea level rise and emphasizes the disparity between coastal response to climate change with and without human intervention.

Hydrologic aspects of marsh ponds during winter on the Gulf Coast Chenier Plain, USA: Effects of structural marsh management

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Bolduc, F.; Afton, A.D.

2004-01-01

The hydrology of marsh ponds influences aquatic invertebrate and waterbird communities. Hydrologic variables in marsh ponds of the Gulf Coast Chenier Plain are potentially affected by structural marsh management (SMM: levees, water control structures and impoundments) that has been implemented since the 1950s. Assuming that SMM restricts tidal flows and drainage of rainwater, we predicted that SMM would increase water depth, and concomitantly decrease salinity and transparency in impounded marsh ponds. We also predicted that SMM would increase seasonal variability in water depth in impounded marsh ponds because of the potential incapacity of water control structures to cope with large flooding events. In addition, we predicted that SMM would decrease spatial variability in water depth. Finally, we predicted that ponds of impounded freshwater (IF), oligohaline (IO), and mesohaline (IM) marshes would be similar in water depth, temperature, dissolved oxygen (O2), and transparency. Using a priori multivariate analysis of variance (MANOVA) contrast, we tested these predictions by comparing hydrologic variables within ponds of impounded and unimpounded marshes during winters 1997-1998 to 1999-2000 on Rockefeller State Wildlife Refuge, near Grand Chenier, Louisiana. Specifically, we compared hydrologic variables (1) between IM and unimpounded mesohaline marsh ponds (UM); and (2) among IF, IO, and IM marshes ponds. As predicted, water depth was higher and salinity and O2 were lower in IM than in UM marsh ponds. However, temperature and transparency did not differ between IM and UM marsh ponds. Water depth varied more among months in IM marsh ponds than within those of UM marshes, and variances among and within ponds were lower in IM than UM marshes. Finally, all hydrologic variables, except salinity, were similar among IF, IO, and IM marsh ponds. Hydrologic changes within marsh ponds due to SMM should (1) promote benthic invertebrate taxa that tolerate low levels of O2 and

CO2 and CH4 fluxes in a Spartina salt marsh and brackish Phragmites marsh in Massachusetts

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Tang, J.; Wang, F.; Kroeger, K. D.; Gonneea, M. E.

2017-12-01

Coastal salt marshes play an important role in global and regional carbon cycling. Tidally restricted marshes reduce salinity and provide a habitat suitable for Phragmites invasion. We measured greenhouse gas (GHG) emissions (CO2 and CH4) continuously with the eddy covariance method and biweekly with the static chamber method in a Spartina salt marsh and a Phragmites marsh on Cape Cod, Massachusetts, USA. We did not find significant difference in CO2 fluxes between the two sites, but the CH4 fluxes were much higher in the Phragmites site than the Spartina marsh. Temporally, tidal cycles influence the CO2 and CH4 fluxes in both sites. We found that the salt marsh was a significant carbon sink when CO2 and CH4 fluxes were combined. Restoring tidally restricted marshes will significantly reduce CH4 emissions and provide a strong ecosystem carbon service.

Incidence and severity of cavity spot of carrot as affected by pigmentation, temperature, and rainfall

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Field trials to determine the effect of carrot pigmentation and weather parameters on cavity spot of carrot (CS) were conducted in the Holland/Bradford Marsh region of Ontario between 2002 and 2009. Twenty three colored carrots from the USDA-ARS breeding program at the University of Wisconsin (5) an...

Modeling tidal marsh distribution with sea-level rise: evaluating the role of vegetation, sediment, and upland habitat in marsh resiliency.

Science.gov (United States)

Schile, Lisa M; Callaway, John C; Morris, James T; Stralberg, Diana; Parker, V Thomas; Kelly, Maggi

2014-01-01

Tidal marshes maintain elevation relative to sea level through accumulation of mineral and organic matter, yet this dynamic accumulation feedback mechanism has not been modeled widely in the context of accelerated sea-level rise. Uncertainties exist about tidal marsh resiliency to accelerated sea-level rise, reduced sediment supply, reduced plant productivity under increased inundation, and limited upland habitat for marsh migration. We examined marsh resiliency under these uncertainties using the Marsh Equilibrium Model, a mechanistic, elevation-based soil cohort model, using a rich data set of plant productivity and physical properties from sites across the estuarine salinity gradient. Four tidal marshes were chosen along this gradient: two islands and two with adjacent uplands. Varying century sea-level rise (52, 100, 165, 180 cm) and suspended sediment concentrations (100%, 50%, and 25% of current concentrations), we simulated marsh accretion across vegetated elevations for 100 years, applying the results to high spatial resolution digital elevation models to quantify potential changes in marsh distributions. At low rates of sea-level rise and mid-high sediment concentrations, all marshes maintained vegetated elevations indicative of mid/high marsh habitat. With century sea-level rise at 100 and 165 cm, marshes shifted to low marsh elevations; mid/high marsh elevations were found only in former uplands. At the highest century sea-level rise and lowest sediment concentrations, the island marshes became dominated by mudflat elevations. Under the same sediment concentrations, low salinity brackish marshes containing highly productive vegetation had slower elevation loss compared to more saline sites with lower productivity. A similar trend was documented when comparing against a marsh accretion model that did not model vegetation feedbacks. Elevation predictions using the Marsh Equilibrium Model highlight the importance of including vegetation responses to sea

Phylogeography and Demographic History of Chinese Black-Spotted Frog Populations (Pelophylax nigromaculata: Evidence for Independent Refugia Expansion and Secondary Contact

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Zhou Kaiya

2008-01-01

Full Text Available Abstract Background Pleistocene glaciations had considerable impact on phylogeographic patterns within and among closely related species of many vertebrates. Compared to Europe and North America, research on the phylogeography of vertebrates in East Asia, particularly in China, remains limited. The black-spotted frog (Pelophylax nigromaculata is a widespread species in East Asia. The wide distribution of this species in China makes it an ideal model for the study of palaeoclimatic effects on vertebrates in East Asia. Our previous studies of P. nigromaculata revealed significant subdivisions between the northeast China populations and populations in other regions of the mainland. In the present study, we aim to see whether the deepest splits among lineages and perhaps subsequent genealogical divisions are temporally consistent with a Pleistocene origin and whether clade geographic distributions, with insight into expansion patterns, are similarly spatially consistent with this model. Results Using 1143 nucleotides of the mitochondrial cytochrome b gene from 262 individuals sampled from 28 localities, two main clades (clade A and clade B differing by c. 7.72% sequence divergence were defined from parsimony analyses. The corresponding timing of lineage divergence, 0.92 Mya, indicates a most likely Pleistocene split. The A clade is further subdivided into two sub-clades, A1 and A2 with 1.22% sequence divergence. Nested clade phylogeographical and population demographic analyses suggested that the current distribution of this frog species was the result of range expansion from two independent refugia during the last interglacial period. We discovered a population within which haplotype lineages A and B of P. nigromaculata coexist in the Dongliao area of China by nucleotide sequences, PCR-RFLP and ISSR (inter simple sequence repeat patterns. The ISSR result in particular supported divergence between the mitochondrial clades A and B and implied

The marshes in Bogota

International Nuclear Information System (INIS)

Garcia Romero, Juan F; Moreno Gutierrez, Vanesa; Villalba Malaver, Juan Carlos

1998-01-01

A description is made, a diagnosis and some exits, to their preservation for each one of the 10 marshes that they still exist in Bogota. The marshes defines them the convention of Ramsar: As extensions of swamps, swamps or peat-bogs covered with water, be these of natural or artificial, permanent or temporary, stagnated regime or currents, sweet, salubrious or salted, included those of extensions of marine water whose depth in tide lowers don't exceed six meters. The marshes occupy the space that there are between the humid means and the dry means, and that they possess characteristic of both, for what they cannot be classified categorically as aquatic neither terrestrial. The characteristic of a marsh is the presence of water during sufficiently lingering periods as to alter the soils, their microorganisms and the flora and fauna communities

Organic carbon isotope systematics of coastal marshes

NARCIS (Netherlands)

Middelburg, J.J.; Nieuwenhuize, J.; Lubberts, R.K.; Van de Plassche, O.

1997-01-01

Measurements of nitrogen, organic carbon and delta(13)C are presented for Spartina-dominated marsh sediments from a mineral marsh in SW Netherlands and from a peaty marsh in Massachusetts, U.S.A. delta(13)C Of organic carbon in the peaty marsh sediments is similar to that of Spartina material,

Green tree frog (Hyla cinerea) and ground squirrel (Xerospermophilus spilosoma) mortality attributed to inland brevetoxin transportation at Padre Island National Seashore, Texas, 2015

Science.gov (United States)

Buttke, Danielle E.; Walker, Alicia; Huang, I-Shuo; Flewelling, Leanne; Lankton, Julia S.; Ballmann, Anne E.; Clapp, Travis; Lindsay, James; Zimba, Paul V.

2018-01-01

On 16 September 2015, a red tide (Karenia brevis) bloom impacted coastal areas of Padre Island National Seashore Park. Two days later and about 0.9 km inland, 30–40 adult green tree frogs (Hyla cinerea) were found dead after displaying tremors, weakness, labored breathing, and other signs of neurologic impairment. A rainstorm, accompanied by high winds, rough surf, and high tides, which could have aerosolized brevetoxin, occurred on the morning of the mortality event. Frog carcasses were healthy but contained significant brevetoxin in tissues. Tissue brevetoxin was also found in two dead or dying spotted ground squirrels (Xerospermophilus spilosoma) and a coyote (Canis latrans). Rainwater collected from the location of the mortality event contained brevetoxin. Mortality of green tree frog and ground squirrel mortality has not been previously attributed to brevetoxin exposure and such mortality suggested that inland toxin transport, possibly through aerosols, rainfall, or insects, may have important implications for coastal species.

Sedimentation and response to sea-level rise of a restored marsh with reduced tidal exchange: Comparison with a natural tidal marsh

Science.gov (United States)

Vandenbruwaene, W.; Maris, T.; Cahoon, D.R.; Meire, P.; Temmerman, S.

2011-01-01

Along coasts and estuaries, formerly embanked land is increasingly restored into tidal marshes in order to re-establish valuable ecosystem services, such as buffering against flooding. Along the Scheldt estuary (Belgium), tidal marshes are restored on embanked land by allowing a controlled reduced tide (CRT) into a constructed basin, through a culvert in the embankment. In this way tidal water levels are significantly lowered (ca. 3 m) so that a CRT marsh can develop on formerly embanked land with a ca. 3 m lower elevation than the natural tidal marshes. In this study we compared the long-term change in elevation (ΔE) within a CRT marsh and adjacent natural tidal marsh. Over a period of 4 years, the observed spatio-temporal variations in ΔE rate were related to variations in inundation depth, and this relationship was not significantly different for the CRT marsh and natural tidal marsh. A model was developed to simulate the ΔE over the next century. (1) Under a scenario without mean high water level (MHWL) rise in the estuary, the model shows that the marsh elevation-ΔE feedback that is typical for a natural tidal marsh (i.e. rising marsh elevation results in decreasing inundation depth and therefore a decreasing increase in elevation) is absent in the basin of the CRT marsh. This is because tidal exchange of water volumes between the estuary and CRT marsh are independent from the CRT marsh elevation but dependent on the culvert dimensions. Thus the volume of water entering the CRT remains constant regardless of the marsh elevation. Consequently the CRT MHWL follows the increase in CRT surface elevation, resulting after 75 years in a 2–2.5 times larger elevation gain in the CRT marsh, and a faster reduction of spatial elevation differences. (2) Under a scenario of constant MHWL rise (historical rate of 1.5 cm a-1), the equilibrium elevation (relative to MHWL) is 0.13 m lower in the CRT marsh and is reached almost 2 times faster. (3) Under a scenario of

Complete Genome Sequence of Frog virus 3, Isolated from a Strawberry Poison Frog (Oophaga pumilio) Imported from Nicaragua into the Netherlands.

Science.gov (United States)

Saucedo, Bernardo; Hughes, Joseph; van Beurden, Steven J; Suárez, Nicolás M; Haenen, Olga L M; Voorbergen-Laarman, Michal; Gröne, Andrea; Kik, Marja J L

2017-08-31

Frog virus 3 was isolated from a strawberry poison frog ( Oophaga pumilio ) imported from Nicaragua via Germany to the Netherlands, and its complete genome sequence was determined. Frog virus 3 isolate Op /2015/Netherlands/UU3150324001 is 107,183 bp long and has a nucleotide similarity of 98.26% to the reference Frog virus 3 isolate. Copyright © 2017 Saucedo et al.

Metabolite profiles of striped marsh frog (Limnodynastes peronii) larvae exposed to the anti-androgenic fungicides vinclozolin and propiconazole are consistent with altered steroidogenesis and oxidative stress.

Science.gov (United States)

Melvin, Steven D; Leusch, Frederic D L; Carroll, Anthony R

2018-06-01

Amphibians use wetlands in urban and agricultural landscapes for breeding, growth and development. Fungicides and other pesticides used in these areas have therefore been identified as potential threats that could contribute towards amphibian population declines. However, relatively little is known about how such chemicals influence sensitive early life-stages or how short episodic exposures influence sub-lethal physiological and metabolic pathways. The present study applied untargeted metabolomics to evaluate effects in early post-hatch amphibian larvae exposed to the anti-androgenic fungicides vinclozolin and propiconazole. Recently hatched (Gosner developmental stage 25) striped marsh frog (Limnodynastes peronii) larvae were exposed for 96 h to vinclozolin at 17.5, 174.8 and 1748.6 nM and propiconazole at 5.8, 58.4 and 584.4 nM. Nuclear Magnetic Resonance (NMR) spectroscopy was performed on polar metabolites obtained from whole-body extracts. Both fungicides altered metabolite profiles compared to control animals at all concentrations tested, and there were notable differences between the two chemicals. Overall responses were consistent with altered steroidogenesis and/or cholesterol metabolism, with inconsistent responses between the two fungicides likely reflecting minor differences in the mechanisms of action of these chemicals. Broad down-regulation of the tricarboxylic acid (TCA) cycle was also observed and is indicative of oxidative stress. Interestingly, formic acid was significantly increased in larvae exposed to vinclozolin but not propiconazole, suggesting this metabolite may serve as a useful biomarker of exposure to androgen-receptor binding anti-androgenic contaminants. This study demonstrates the power of untargeted metabolomics for distinguishing between similarly acting, but distinct, pollutants and for unraveling non-endocrine responses resulting from exposure to known endocrine active contaminants. Copyright © 2018 Elsevier B.V. All

Coastal salt-marshes in Albania

OpenAIRE

JULIAN SHEHU; ALMA IMERI; RUDINA KOCI; ALFRED MULLAJ

2014-01-01

The salt marshes of Albania comprise a narrow belt along the Adriatic and Ionian Seas. They have been the subject of a range of human activities causing habitat loss. Enclosure for agricultural use, ports and other infrastructure has reduced many salt marshes to a narrow fringe along estuary shores. Salt marshes are important for a range of interests. In particular they support a range of specialist plant communities and associated animals (especially breeding and wintering birds) and often h...

Florida's salt-marsh management issues: 1991-98.

Science.gov (United States)

Carlson, D B; O'Bryan, P D; Rey, J R

1999-06-01

During the 1990s, Florida has continued to make important strides in managing salt marshes for both mosquito control and natural resource enhancement. The political mechanism for this progress continues to be interagency cooperation through the Florida Coordinating Council on Mosquito Control and its Subcommittee on Managed Marshes (SOMM). Continuing management experience and research has helped refine the most environmentally acceptable source reduction methods, which typically are Rotational Impoundment Management or Open Marsh Water Management. The development of regional marsh management plans for salt marshes within the Indian River Lagoon by the SOMM has helped direct the implementation of the best management practices for these marshes. Controversy occasionally occurs concerning what management technique is most appropriate for individual marshes. The most common disagreement is over the benefits of maintaining an impoundment in an "open" vs. "closed" condition, with the "closed" condition, allowing for summer mosquito control flooding or winter waterfowl management. New federal initiatives influencing salt-marsh management have included the Indian River Lagoon-National Estuary Program and the Pesticide Environmental Stewardship Program. A new Florida initiative is the Florida Department of Environmental Protection's Eco-system Management Program with continuing involvement by the Surface Water Improvement and Management program. A developing mitigation banking program has the potential to benefit marsh management but mosquito control interests may suffer if not handled properly. Larvicides remain as an important salt-marsh integrated pest management tool with the greatest acreage being treated with temephos, followed by Bacillus thuringiensis israelensis and methoprene. However, over the past 14 years, use of biorational larvicides has increased greatly.

Effect of hurricanes and violent storms on salt marsh

Science.gov (United States)

Leonardi, N.; Ganju, N. K.; Fagherazzi, S.

2016-12-01

Salt marsh losses have been documented worldwide because of land use change, wave erosion, and sea-level rise. It is still unclear how resistant salt marshes are to extreme storms and whether they can survive multiple events without collapsing. Based on a large dataset of salt marsh lateral erosion rates collected around the world, here, we determine the general response of salt marsh boundaries to wave action under normal and extreme weather conditions. As wave energy increases, salt marsh response to wind waves remains linear, and there is not a critical threshold in wave energy above which salt marsh erosion drastically accelerates. We apply our general formulation for salt marsh erosion to historical wave climates at eight salt marsh locations affected by hurricanes in the United States. Based on the analysis of two decades of data, we find that violent storms and hurricanes contribute less than 1% to long-term salt marsh erosion rates. In contrast, moderate storms with a return period of 2.5 mo are those causing the most salt marsh deterioration. Therefore, salt marshes seem more susceptible to variations in mean wave energy rather than changes in the extremes. The intrinsic resistance of salt marshes to violent storms and their predictable erosion rates during moderate events should be taken into account by coastal managers in restoration projects and risk management plans.

Structural Classification of Marshes with Polarimetric SAR Highlighting the Temporal Mapping of Marshes Exposed to Oil

Directory of Open Access Journals (Sweden)

Elijah Ramsey

2015-09-01

Full Text Available Empirical relationships between field-derived Leaf Area Index (LAI and Leaf Angle Distribution (LAD and polarimetric synthetic aperture radar (PolSAR based biophysical indicators were created and applied to map S. alterniflora marsh canopy structure. PolSAR and field data were collected near concurrently in the summers of 2010, 2011, and 2012 in coastal marshes, and PolSAR data alone were acquired in 2009. Regression analyses showed that LAI correspondence with the PolSAR biophysical indicator variables equaled or exceeded those of vegetation water content (VWC correspondences. In the final six regressor model, the ratio HV/VV explained 49% of the total 77% explained LAI variance, and the HH-VV coherence and phase information accounted for the remainder. HV/HH dominated the two regressor LAD relationship, and spatial heterogeneity and backscatter mechanism followed by coherence information dominated the final three regressor model that explained 74% of the LAD variance. Regression results applied to 2009 through 2012 PolSAR images showed substantial changes in marsh LAI and LAD. Although the direct cause was not substantiated, following a release of freshwater in response to the 2010 Deepwater Horizon oil spill, the fairly uniform interior marsh structure of 2009 was more vertical and dense shortly after the oil spill cessation. After 2010, marsh structure generally progressed back toward the 2009 uniformity; however, the trend was more disjointed in oil impact marshes.

Complete Genome Sequence of Frog virus 3, Isolated from a Strawberry Poison Frog (Oophaga pumilio) Imported from Nicaragua into the Netherlands

NARCIS (Netherlands)

Saucedo, Bernardo; Hughes, Joseph; van Beurden, Steven J; Suárez, Nicolás M; Haenen, Olga L M; Voorbergen-Laarman, Michal A; Gröne, Andrea; Kik, Marja J L

2017-01-01

Frog virus 3 was isolated from a strawberry poison frog (Oophaga pumilio) imported from Nicaragua via Germany to the Netherlands, and its complete genome sequence was determined. Frog virus 3 isolate Op/2015/Netherlands/UU3150324001 is 107,183 bp long and has a nucleotide similarity of 98.26% to the

Complete genome sequence of frog virus 3, isolated from a strawberry poison frog (Oophaga pumilio) imported from nicaragua into the Netherlands

NARCIS (Netherlands)

Saucedo, Bernardo; Hughes, Joseph; Beurden, van Steven J.; Suárez, Nicolás M.; Haenen, Olga L.M.; Voorbergen-Laarman, Michal; Gröne, Andrea; Kika, Marja J.L.

2017-01-01

Frog virus 3 was isolated from a strawberry poison frog (Oophaga pumilio) imported from Nicaragua via Germany to the Netherlands, and its complete genome sequence was determined. Frog virus 3 isolate Op/2015/Netherlands/UU3150324001 is 107,183 bp long and has a nucleotide similarity of 98.26% to the

Pemanfaatan kulit kodok (bull frog

Directory of Open Access Journals (Sweden)

Muchtar Lutfie

1995-06-01

Full Text Available The objective of this study was to measure the tensile strength and the elongation of finished leather made from Bull Frog skin, so that the utilization of that leather can be specified. The samples used were twenty pieces of wet salted Bull Frog skin from East Java which have been processed to finished leather using chromosal B. and Irgatan LV as the tanning agents. Laboratory tests shawed that the average tensile strength was 177,675 Kg/Cm2 and the average elongation was 89,9%. Based on those results, it can be concluded that Bull Frog leather was suitable for leather goods such as bag, wallet, etc. so it can be used as substitute for Glace leather.

Flow paths of water and sediment in a tidal marsh: relations with marsh developmental stage and tidal inundation height

NARCIS (Netherlands)

Temmerman, S.; Bouma, T.J.; Govers, G.; Lauwaet, D.

2005-01-01

This study provides new insights in the relative role of tidal creeks and the marsh edge in supplying water and sediments to and from tidal marshes for a wide range of tidal inundation cycles with different high water levels and for marsh zones of different developmental stage. Net import or export

Galveston Bay Marsh Terracing 2001-2002

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Marsh terracing is used to restore coastal wetlands by converting shallow nonvegetated bottom to intertidal marsh. Terraces are constructed from excavated bottom...

Structural classification of marshes with Polarimetric SAR highlighting the temporal mapping of marshes exposed to oil

Science.gov (United States)

Ramsey, Elijah W.; Rangoonwala, Amina; Jones, Cathleen E.

2015-01-01

Empirical relationships between field-derived Leaf Area Index (LAI) and Leaf Angle Distribution (LAD) and polarimetric synthetic aperture radar (PolSAR) based biophysical indicators were created and applied to map S. alterniflora marsh canopy structure. PolSAR and field data were collected near concurrently in the summers of 2010, 2011, and 2012 in coastal marshes, and PolSAR data alone were acquired in 2009. Regression analyses showed that LAI correspondence with the PolSAR biophysical indicator variables equaled or exceeded those of vegetation water content (VWC) correspondences. In the final six regressor model, the ratio HV/VV explained 49% of the total 77% explained LAI variance, and the HH-VV coherence and phase information accounted for the remainder. HV/HH dominated the two regressor LAD relationship, and spatial heterogeneity and backscatter mechanism followed by coherence information dominated the final three regressor model that explained 74% of the LAD variance. Regression results applied to 2009 through 2012 PolSAR images showed substantial changes in marsh LAI and LAD. Although the direct cause was not substantiated, following a release of freshwater in response to the 2010 Deepwater Horizon oil spill, the fairly uniform interior marsh structure of 2009 was more vertical and dense shortly after the oil spill cessation. After 2010, marsh structure generally progressed back toward the 2009 uniformity; however, the trend was more disjointed in oil impact marshes.             

Efficacy of ivermectin as an anthelmintic in leopard frogs.

Science.gov (United States)

Letcher, J; Glade, M

1992-02-15

Ivermectin administered cutaneously at dosages of 2 mg/kg of body weight eliminated nematode infections in leopard frogs. Three clinical trials were conducted. In the first trial, 5 groups of 11 frogs were given ivermectin IM at dosages of 0, 0.2, 0.4, 2, or 20 mg/kg. All frogs given ivermectin IM at dosages of 2.0 mg/kg or greater died. In trial 2, 44 frogs, allotted to 5 groups, were given ivermectin cutaneously at 0, 0.2, 2, or 20 mg/kg. Cutaneously administered ivermectin was not toxic at dosages up to 20 mg/kg. In trial 3, nematode infections were eliminated in all 10 frogs treated cutaneously with ivermectin at 2.0 mg/kg.

Comparative microhabitat characteristics at oviposition sites of the California red-legged frog (Rana draytonii)

Science.gov (United States)

Alvarez, Jeff A.; Cook, David G.; Yee, Julie L.; van Hattem, Michael G.; Fong, Darren R.; Fisher, Robert N.

2013-01-01

We studied the microhabitat characteristics of 747 egg masses of the federally-threatened Rana draytonii (California red-legged frog) at eight sites in California. our study showed that a broad range of aquatic habitats are utilized by ovipositing R. draytonii, including sites with perennial and ephemeral water sources, natural and constructed wetlands, lentic and lotic hydrology, and sites surrounded by protected lands and nested within modified urban areas. We recorded 45 different egg mass attachment types, although the use of only a few types was common at each site. These attachment types ranged from branches and roots of riparian trees, emergent and submergent wetland vegetation, flooded upland grassland/ruderal vegetation, and debris. eggs were deposited in relatively shallow water (mean 39.7 cm) when compared to maximum site depths. We found that most frogs in artificial pond, natural creek, and artificial channel habitats deposited egg masses within one meter of the shore, while egg masses in a seasonal marsh averaged 27.3 m from the shore due to extensive emergent vegetation. Rana draytonii appeared to delay breeding in lotic habitats and in more inland sites compared to lentic habitats and coastal sites. eggs occurred as early as mid-december at a coastal artificial pond and as late as mid-April in an inland natural creek. We speculate that this delay in breeding may represent a method of avoiding high-flow events and/or freezing temperatures. Understanding the factors related to the reproductive needs of this species can contribute to creating, managing, or preserving appropriate habitat, and promoting species recovery.

Marshes on the Move: Testing effects of seawater intrusion on ...

Science.gov (United States)

The Northeastern United States is a hotspot for sea level rise (SLR), subjecting coastal salt marshes to erosive loss, shifts in vegetation communities, and altered biogeochemistry due to seawater intrusion. Salt marsh plant community zonation is driven by tradeoffs in stress tolerance and interspecific interactions. As seawater inundates progressively higher marsh elevations, shifts in marsh vegetation communities landward may herald salt marsh “migration”, which could allow continuity of marsh function and ecosystem service provision. To elucidate possible effects of seawater intrusion on marsh-upland edge plant communities, a space-for-time approach was replicated at two Rhode Island salt marshes. At each site, peat blocks (0.5 m x 0.5 m x 0.5 m, n=6) with intact upland-marsh edge vegetation were transplanted downslope into the regularly-inundated mid-marsh. Procedural controls (n=3) were established at each elevation by removing and replacing peat blocks, and natural controls (n=3) consisted of undisturbed plots. During peak productivity, each plot was assessed for species composition, percent cover and average height. Results demonstrate stunting of marsh-upland edge vegetation in response to increased inundation, and the beginnings of colonization of the transplanted plots by salt marsh species. The extent of colonization differed between the two sites, suggesting that site-specific factors govern vegetation responses to increased inundation.

CARE AND FEEDING OF FROGS

International Nuclear Information System (INIS)

Pan, Margaret; Chiang, Eugene

2012-01-01

'Propellers' are features in Saturn's A ring associated with moonlets that open partial gaps. They exhibit non-Keplerian motion (Tiscareno et al.); the longitude residuals of the best-observed propeller, 'Blériot', appear consistent with a sinusoid of period ∼4 years. Pan and Chiang proposed that propeller moonlets librate in 'frog resonances' with co-orbiting ring material. By analogy with the restricted three-body problem, they treated the co-orbital material as stationary in the rotating frame and neglected non-co-orbital material. Here we use simple numerical experiments to extend the frog model, including feedback due to the gap's motion, and drag associated with the Lindblad disk torques that cause Type I migration. Because the moonlet creates the gap, we expect the gap centroid to track the moonlet, but only after a time delay t delay , the time for a ring particle to travel from conjunction with the moonlet to the end of the gap. We find that frog librations can persist only if t delay exceeds the frog libration period P lib , and if damping from Lindblad torques balances driving from co-orbital torques. If t delay ib , then the libration amplitude damps to zero. In the case of Blériot, the frog resonance model can reproduce the observed libration period P lib ≅ 4 yr. However, our simple feedback prescription suggests that Blériot's t delay ∼ 0.01P lib , which is inconsistent with the observed libration amplitude of 260 km. We urge more accurate treatments of feedback to test the assumptions of our toy models.

Large intestine bacterial flora of nonhibernating and hibernating leopard frogs (Rana pipiens).

OpenAIRE

Gossling, J; Loesche, W J; Nace, G W

1982-01-01

The bacteria in the large intestines of 10 northern leopard frogs (Rana pipiens) were enumerated and partially characterized. Four nonhibernating frogs were collected in the summer, four hibernating frogs were collected in the winter, and two frogs just emerged from hibernation were collected in the spring. All frogs had about 10(10) bacteria per g (wet weight) of intestinal contents and about 10(9) bacteria per g (wet weight) of mucosal scraping, although the counts from the winter frogs wer...

THE MOCHE BOTANICAL FROG (La rana botánica mochica)

OpenAIRE

Donna McClelland †

2011-01-01

Plants and animals with features which identify them as supernaturals characterize the art of the Precolumbian Moche culture of northern Peru. Among these animals is a frog with feline attributes and a consistent association with manioc tubers, stalks, and plants, the Botanical Frog. The Botanical Frog appears to have been patterned on Leptodactylus pentadactylus. It is shown copulating with felines. Fine line painted vessels and ones with low relief decoration show the Botanical Frog perform...

Assessing the Potential for Inland Migration of a Northeastern Salt Marsh

Science.gov (United States)

Farron, S.; FitzGerald, D.; Hughes, Z. J.

2017-12-01

It is often assumed that as sea level rises, salt marshes will expand inland. If the slope of the upland is relatively flat and sufficient sediment is available, marshes should be able to spread horizontally and grow vertically in order to maintain their areal extent. However, in cases where marshes are backed by steeper slopes, or sediment supply is limited, rising sea level will produce minimal gains along the landward edge insufficient to offset potential losses along the seaward edge. This study uses future sea level rise scenarios to project areal losses for the Great Marsh in Massachusetts, the largest continuous salt marsh in New England. Land area covered by salt marsh is defined by surface elevation. Annual sediment input to the system is estimated based on the areal extent of high and low marsh, historical accretion rates for each, and known organic/inorganic ratios. Unlike other studies, sediment availability is considered to be finite, and future accretion rates are limited based on the assumption that the system is presently receiving the maximum sediment input available. The Great Marsh is dominated by high marsh; as sea level rises, it will convert to low marsh, vastly altering the ecological and sedimentological dynamics of the system. If it is assumed that former high marsh areas will build vertically at the increased rate associated with low marsh, then much of the total marsh area will be maintained. However, this may be an unrealistic assumption due to the low levels of suspended sediment within the Great Marsh system. Modeling the evolution of the Great Marsh by assuming that the current accretion rate is the maximum possible for this system reveals much greater losses than models assuming an unlimited sediment supply would predict (17% less marsh by 2115). In addition, uplands surrounding the Great Marsh have been shaped by glaciation, leaving numerous drumlins and other glacial landforms. Compared to the flat backbarrier, the surrounding

Salt Marshes as Sources and Sinks of Silica

Science.gov (United States)

Carey, J.; Fulweiler, R. W.

2014-12-01

The role of salt marshes in controlling silica exchange between terrestrial and marine environments is unclear. In some studies, large quantities of dissolved silica (DSi) appear to be exported from marshes via tidal exchange, potentially fueling future diatom production in adjacent waters. In contrast, other studies report insignificant DSi export and found instead that salt marshes appeared to be Si sinks. Further, few studies examine salt marsh Si export in relation to inorganic nitrogen (DIN) and phosphorus (DIP). We address these uncertainties by quantifying net fluxes of DSi and biogenic Si (BSi), as well as DIN and DIP during the spring and summer in a relatively undisturbed southern New England salt marsh (Narragansett Bay, USA). Our data demonstrates that during the spring, when estuarine waters are deplete in DSi, the marsh serves as a net sink of BSi (132 mol h-1) and a source of DSi (31 mol h-1) to the estuary. The spring DIN:DSi ratios of ebbing water were more than five times lower than flood waters. Most importantly, the DSi export rates (6.5 x103 mol d-1 km-2) are an order of magnitude larger than the export by rivers in the region (115 mol d-1 km-2), indicating the marsh tidal exchange is vital in supplying the Si necessary for spring diatom blooms in the estuary. Conversely, during the summer the marsh served as a net Si sink, importing on average 59 mol DSi h-1 and 39 mol BSi h-1. These data highlight that the role of salt marshes in silica cycling appears to have a strong seasonality. We hypothesize that net import of Si increases the residence time of Si in estuarine systems, providing an important and previously over-looked ecosystem service. In the absence of salt marshes, ~5.1 x 104 kmol of Si would be exported from this system during the growing season, possibly decreasing Si availability and altering phytoplankton species composition in the estuary.

Peatlands and green frogs: A relationship regulated by acidity?

Science.gov (United States)

Mazerolle, M.J.

2005-01-01

The effects of site acidification on amphibian populations have been thoroughly addressed in the last decades. However, amphibians in naturally acidic environments, such as peatlands facing pressure from the peat mining industry, have received little attention. Through two field studies and an experiment, I assessed the use of bog habitats by the green frog (Rana clamitans melanota), a species sensitive to various forestry and peat mining disturbances. First, I compared the occurrence and breeding patterns of frogs in bog and upland ponds. I then evaluated frog movements between forest and bog habitats to determine whether they corresponded to breeding or postbreeding movements. Finally, I investigated, through a field experiment, the value of bogs as rehydrating areas for amphibians by offering living Sphagnum moss and two media associated with uplands (i.e., water with pH ca 6.5 and water-saturated soil) to acutely dehydrated frogs. Green frog reproduction at bog ponds was a rare event, and no net movements occurred between forest and bog habitats. However, acutely dehydrated frogs did not avoid Sphagnum. Results show that although green frogs rarely breed in bogs and do not move en masse between forest and bog habitats, they do not avoid bog substrates for rehydrating, despite their acidity. Thus, bogs offer viable summering habitat to amphibians, which highlights the value of these threatened environments in terrestrial amphibian ecology.

Modelling Watershed and Estuarine Controls on Salt Marsh Distributions

Science.gov (United States)

Yousefi Lalimi, F.; Marani, M.; Murray, A. B.; D'Alpaos, A.

2017-12-01

The formation and evolution of tidal platforms have been extensively studied through observations and models, describing landform dynamics as a result of the local interactions and feedbacks among hydrodynamics, vegetation, and sediment transport. However, existing work mainly focuses on individual marsh platforms and, possibly, their immediate surrounding, such that the influence and controls on marsh dynamics of inland areas (through fluvial inputs) and of exchanges with the ocean have not been comprehensively and simultaneously accounted for. Here, we develop and use a process-based model to evaluate the relative role of watershed, estuarine, and ocean controls on salt marsh accretionary and depositional/erosional dynamics and define how these factors interact to determine salt marsh resilience to environmental change at the whole-estuary scale. Our results, in line with previous work, show that no stable equilibrium exists for the erosional dynamics of the marsh/tidal flat boundary. In addition, we find that under some circumstances, vertical accretion/erosion dynamics can lead to transitions between salt marsh and tidal flat equilibrium states that occur much more rapidly than marsh/tidal flat boundary erosion or accretion could. We further define, in the multidimensional space of estuarine-scale morphodynamic forcings, the basins of attractions leading to marsh-dominated and tidal-flat-dominated estuaries. The relatively slow dynamics asymptotically leading to marsh- or tidal-flat- dominance in many cases suggest that estuaries are likely to be found, at any given time, in a transition state dictated by temporal variations in environmental forcings.

Tidal Marshes: The Boundary between Land and Ocean.

Science.gov (United States)

Gosselink, James

An overview of the ecology of the tidal marshes along the gulf coast of the United States is presented. The following topics are included: (1) the human impact on tidal marshes; (2) the geologic origins of tidal marshes; (3) a description of the physical characteristics and ecosystem of the marshlands; (4) a description of the marshland food chain…

Biota - 2011 Vegetation Inventory - Marsh Lake, MN

Data.gov (United States)

Army Corps of Engineers, Department of the Army, Department of Defense — 2011 Vegetation Classification for Marsh Lake, MN Vegetation Project Report, OMBIL Environmental Stewardship - Level 1 Inventory. Marsh Lake is located on the...

Carbon sequestration by Australian tidal marshes

KAUST Repository

Macreadie, Peter I.

2017-03-10

Australia\\'s tidal marshes have suffered significant losses but their recently recognised importance in CO2 sequestration is creating opportunities for their protection and restoration. We compiled all available data on soil organic carbon (OC) storage in Australia\\'s tidal marshes (323 cores). OC stocks in the surface 1 m averaged 165.41 (SE 6.96) Mg OC ha-1 (range 14-963 Mg OC ha-1). The mean OC accumulation rate was 0.55 ± 0.02 Mg OC ha-1 yr-1. Geomorphology was the most important predictor of OC stocks, with fluvial sites having twice the stock of OC as seaward sites. Australia\\'s 1.4 million hectares of tidal marshes contain an estimated 212 million tonnes of OC in the surface 1 m, with a potential CO2-equivalent value of $USD7.19 billion. Annual sequestration is 0.75 Tg OC yr-1, with a CO2-equivalent value of $USD28.02 million per annum. This study provides the most comprehensive estimates of tidal marsh blue carbon in Australia, and illustrates their importance in climate change mitigation and adaptation, acting as CO2 sinks and buffering the impacts of rising sea level. We outline potential further development of carbon offset schemes to restore the sequestration capacity and other ecosystem services provided by Australia tidal marshes.

Dynamic interactions between coastal storms and salt marshes: A review

Science.gov (United States)

Leonardi, Nicoletta; Carnacina, Iacopo; Donatelli, Carmine; Ganju, Neil K.; Plater, Andrew James; Schuerch, Mark; Temmerman, Stijn

2018-01-01

This manuscript reviews the progresses made in the understanding of the dynamic interactions between coastal storms and salt marshes, including the dissipation of extreme water levels and wind waves across marsh surfaces, the geomorphic impact of storms on salt marshes, the preservation of hurricanes signals and deposits into the sedimentary records, and the importance of storms for the long term survival of salt marshes to sea level rise. A review of weaknesses, and strengths of coastal defences incorporating the use of salt marshes including natural, and hybrid infrastructures in comparison to standard built solutions is then presented.Salt marshes are effective in dissipating wave energy, and storm surges, especially when the marsh is highly elevated, and continuous. This buffering action reduces for storms lasting more than one day. Storm surge attenuation rates range from 1.7 to 25 cm/km depending on marsh and storms characteristics. In terms of vegetation properties, the more flexible stems tend to flatten during powerful storms, and to dissipate less energy but they are also more resilient to structural damage, and their flattening helps to protect the marsh surface from erosion, while stiff plants tend to break, and could increase the turbulence level and the scour. From a morphological point of view, salt marshes are generally able to withstand violent storms without collapsing, and violent storms are responsible for only a small portion of the long term marsh erosion.Our considerations highlight the necessity to focus on the indirect long term impact that large storms exerts on the whole marsh complex rather than on sole after-storm periods. The morphological consequences of storms, even if not dramatic, might in fact influence the response of the system to normal weather conditions during following inter-storm periods. For instance, storms can cause tidal flats deepening which in turn promotes wave energy propagation, and exerts a long term

Dynamic interactions between coastal storms and salt marshes: A review

Science.gov (United States)

Leonardi, Nicoletta; Carnacina, Iacopo; Donatelli, Carmine; Ganju, Neil Kamal; Plater, Andrew James; Schuerch, Mark; Temmerman, Stijn

2018-01-01

This manuscript reviews the progresses made in the understanding of the dynamic interactions between coastal storms and salt marshes, including the dissipation of extreme water levels and wind waves across marsh surfaces, the geomorphic impact of storms on salt marshes, the preservation of hurricanes signals and deposits into the sedimentary records, and the importance of storms for the long term survival of salt marshes to sea level rise. A review of weaknesses, and strengths of coastal defences incorporating the use of salt marshes including natural, and hybrid infrastructures in comparison to standard built solutions is then presented. Salt marshes are effective in dissipating wave energy, and storm surges, especially when the marsh is highly elevated, and continuous. This buffering action reduces for storms lasting more than one day. Storm surge attenuation rates range from 1.7 to 25 cm/km depending on marsh and storms characteristics. In terms of vegetation properties, the more flexible stems tend to flatten during powerful storms, and to dissipate less energy but they are also more resilient to structural damage, and their flattening helps to protect the marsh surface from erosion, while stiff plants tend to break, and could increase the turbulence level and the scour. From a morphological point of view, salt marshes are generally able to withstand violent storms without collapsing, and violent storms are responsible for only a small portion of the long term marsh erosion. Our considerations highlight the necessity to focus on the indirect long term impact that large storms exerts on the whole marsh complex rather than on sole after-storm periods. The morphological consequences of storms, even if not dramatic, might in fact influence the response of the system to normal weather conditions during following inter-storm periods. For instance, storms can cause tidal flats deepening which in turn promotes wave energy propagation, and exerts a long term detrimental

Seasonal comparison of aquatic macroinvertebrate assemblages in a flooded coastal freshwater marsh

Science.gov (United States)

Kang, Sung-Ryong; King, Sammy L.

2013-01-01

Marsh flooding and drying may be important factors affecting aquatic macroinvertebrate density and distribution in coastal freshwater marshes. Limited availability of water as a result of drying in emergent marsh may decrease density, taxonomic diversity, and taxa richness. The principal objectives of this study are to characterize the seasonal aquatic macroinvertebrate assemblage in a freshwater emergent marsh and compare aquatic macroinvertebrate species composition, density, and taxonomic diversity to that of freshwater marsh ponds. We hypothesize that 1) freshwater emergent marsh has lower seasonal density and taxonomic diversity compared to that of freshwater marsh ponds; and 2) freshwater emergent marsh has lower taxa richness than freshwater marsh ponds. Seasonal aquatic macroinvertebrate density in freshwater emergent marsh ranged from 0 organisms/m2 (summer 2009) to 91.1 ± 20.53 organisms/m2 (mean ± SE; spring 2009). Density in spring was higher than in all other seasons. Taxonomic diversity did not differ and there were no unique species in the freshwater emergent marsh. Our data only partially support our first hypothesis as aquatic macroinvertebrate density and taxonomic diversity between freshwater emergent marsh and ponds did not differ in spring, fall, and winter but ponds supported higher macroinvertebrate densities than freshwater emergent marsh during summer. However, our data did not support our second hypothesis as taxa richness between freshwater emergent marsh and ponds did not statistically differ.

Courtship in Frogs

Indian Academy of Sciences (India)

Home; Journals; Resonance – Journal of Science Education; Volume 1; Issue 12. Courtship in Frogs Role of Acoustic Communication in Amphibian Courtship Behaviour. Debjani Roy. General Article Volume 1 Issue 12 December 1996 pp 39-48 ...

Estuaries and Tidal Marshes. Habitat Pac.

Science.gov (United States)

Fish and Wildlife Service (Dept. of Interior), Washington, DC.

This educational packet consists of an overview, three lesson plans, student data sheets, and a poster. The overview examines estuaries and tidal or salt marshes by discussing the plants and animals in these habitats, marsh productivity, benefits and management of the habitats, historical aspects, and development and pollution. A glossary and list…

Marshes on the Move: Testing effects of seawater intrusion on vegetation communities of the salt marsh-upland ecotone

Science.gov (United States)

The Northeastern United States is a hotspot for sea level rise (SLR), subjecting coastal salt marshes to erosive loss, shifts in vegetation communities, and altered biogeochemistry due to seawater intrusion. Salt marsh plant community zonation is driven by tradeoffs in stress to...

Larval tolerance to salinity in three species of Australian anuran: an indication of saline specialisation in Litoria aurea.

Directory of Open Access Journals (Sweden)

Brian D Kearney

Full Text Available Recent anthropogenic influences on freshwater habitats are forcing anuran populations to rapidly adapt to high magnitude changes in environmental conditions or face local extinction. We examined the effects of ecologically relevant elevated salinity levels on larval growth, metamorphosis and survival of three species of Australian anuran; the spotted marsh frog (Limnodynastes tasmaniensis, the painted burrowing frog (Neobatrachus sudelli and the green and golden bell frog (Litoria aurea, in order to better understand the responses of these animals to environmental change. Elevated salinity (16% seawater negatively impacted on the survival of L. tasmaniensis (35% survival and N sudelli (0% survival, while reduced salinity had a negative impact on L. aurea. (16% seawater: 85% survival; 0.4% seawater: 35% survival. L. aurea tadpoles survived in salinities much higher than previously reported for this species, indicating the potential for inter-populations differences in salinity tolerance. In L. tasmaniensis and L. aurea, development to metamorphosis was fastest in low and high salinity treatments suggesting it is advantageous for tadpoles to invest energy in development in both highly favourable and developmentally challenging environments. We propose that this response might either maximise potential lifetime fecundity when tadpoles experience favourable environments, or, facilitate a more rapid escape from pond environments where there is a reduced probability of survival.

Salt Marshes as Potential Indicatore of Global Climate Change

DEFF Research Database (Denmark)

Kim, Daehyun; Cairens, David; Jung, S.H.

2011-01-01

Coastal scientists postulate that salt marshes are significantly affected by dynamics of global climate. However, few studies have explicitly proposed a perspective that regards salt marshes as potential indicators of climate change. This review article evaluates the possibility of salt marshes...... as indicators of global climate change, focusing upon three major aspects: sedimentary, vegetation, and biogeochemical dynamics. The previous literature concerned with these aspects commonly argues that the primary impact of climate change on salt marshes occurs via sea-level variations, because hydrologic...... fluctuations regulate the frequency, duration, and depth of over-marsh flooding events. Sedimentary, floristic, and biogeochemical dynamics prove to be significantly influenced by sealevel changes regardless of climate zones, and hence, undoubtedly possess a potential for indicating climate signatures. However...

Which frog's legs do froggies eat? The use of DNA barcoding for identification of deep frozen frog legs (Dicroglossidae, Amphibia commercialized in France

Directory of Open Access Journals (Sweden)

Annemarie Ohler

2017-02-01

Full Text Available Several millions frogs captured in the wild in Indonesia are sold for food yearly in French supermarkets, as deep frozen frog legs. They are commercialized as Rana macrodon, but up to 15 look-alike species might also be concerned by this trade. From December 2012 to May 2013, we bought 209 specimens of deep frozen frog legs, and identified them through a barcoding approach based on the 16S gene. Our results show that 206 out of the 209 specimens belong to Fejervarya cancrivora, two to Limnonectes macrodon and one to F. moodiei. Thus only 0.96 % of the frogs were correctly identified. Unless misclassification was intentional, it seems that Indonesian frog leg exporters are not able to discriminate between the species. The quasi absence of L. macrodon in our samples might be an indication of its rarity, confirming that its natural populations are declining rapidly, in agreement with its “vulnerable” status according to the IUCN Red List. Our results show that the genetic and morphological diversity of the frogs in trade is much higher than the genetic and morphological diversity measured so far by scientific studies. These results underline the need for large scale studies to assess the status of wild populations.

Can salt marshes survive sea level rise ?

Science.gov (United States)

Tambroni, N.; Seminara, G.

2008-12-01

Stability of salt marshes is a very delicate issue depending on the subtle interplay among hydrodynamics, morphodynamics and ecology. In fact, the elevation of the marsh platform depends essentially on three effects: i) the production of soil associated with sediments resuspended by tidal currents and wind waves in the adjacent tidal flats, advected to the marsh and settling therein; ii) production of organic sediments by the salt marsh vegetation; iii) soil 'loss' driven by sea level rise and subsidence. In order to gain insight into the mechanics of the process, we consider a schematic configuration consisting of a salt marsh located at the landward end of a tidal channel connected at the upstream end with a tidal sea, under different scenarios of sea level rise. We extend the simple 1D model for the morphodynamic evolution of a tidal channel formulated by Lanzoni and Seminara (2002, Journal of Geophysical Research-Oceans, 107, C1) allowing for sediment resuspension in the channel and vegetation growth in the marsh using the depth dependent model of biomass productivity of Spartina proposed by Morris et al. (2002, Ecology, 83, pp. 2869 - 2877). We first focus on the case of a tide dominated salt marsh neglecting wind driven sediment resuspension in the shoal. Results show that the production of biomass plays a crucial role on salt marsh stability and, provided productivity is high enough, it may turn out to be sufficient to counteract the effects of sea level rise even in the absence of significant supply of mineral sediments. The additional effect of wind resuspension is then introduced. Note that the wind action is twofold: on one hand, it generates wind waves the amplitude of which is strongly dependent on shoal depth and wind fetch; on the other hand, it generates currents driven by the surface setup induced by the shear stress acting on the free surface. Here, each contribution is analysed separately. Results show that the values of bottom stress induced by

IgE antibodies of fish allergic patients cross-react with frog parvalbumin.

Science.gov (United States)

Hilger, C; Thill, L; Grigioni, F; Lehners, C; Falagiani, P; Ferrara, A; Romano, C; Stevens, W; Hentges, F

2004-06-01

The major allergens in fish are parvalbumins. Important immunoglobulin (Ig)E cross-recognition of parvalbumins from different fish species has been shown. Recently frog parvalbumin alpha has been found to be responsible for a case of IgE-mediated anaphylaxis triggered by the ingestion of frog meat. The aim of this study was to investigate whether IgE antibodies of fish allergic persons cross-react with frog parvalbumin and to appreciate its clinical relevance. The sera of 15 fish allergic patients and one fish and frog allergic patient were tested by IgE-immunoblotting against frog muscle extract. Sera were tested against recombinant parvalbumin alpha and beta from Rana esculenta. Skin prick tests were performed in selected patients with recombinant frog parvalbumin. Ca(2+) depletion experiments and inhibition studies with purified cod and frog recombinant parvalbumin were done to characterize the cross-reactive pattern. Fourteen of the sera tested had IgE antibodies recognizing low molecular weight components in frog muscle extract. Calcium depletion experiments or inhibition of patient sera with purified cod parvalbumin led to a significant or complete decrease in IgE binding. When tested against recombinant parvalbumins, three of 13 sera reacted with alpha parvalbumin and 11 of 12 reacted with beta parvalbumin from R. esculenta. Skin prick tests performed with recombinant frog parvalbumin were positive in fish allergic patients. Inhibition studies showed that a fish and frog allergic patient was primarily sensitized to fish parvalbumin. Cod parvalbumin, a major cross-reactive allergen among different fish species, shares IgE binding epitopes with frog parvalbumin. This in vitro cross-reactivity seems to be also clinically relevant. Parvalbumins probably represent a new family of cross-reactive allergens.

Assessing Salt Marsh Recovery Utilizing Improved Computer-Aided Tomography Technology (CTT)

Science.gov (United States)

In 2001 the Padanarum marsh, a small 7.2-acre marsh in Dartmouth, MA, was chosen as a Tidal Hydrology Restoration site. The site was initially characterized as a brackish mostly freshwater deteriorating marsh. In May 2003 the seawater input to this marsh was increased by replacin...

Ant and Mite Diversity Drives Toxin Variation in the Little Devil Poison Frog.

Science.gov (United States)

McGugan, Jenna R; Byrd, Gary D; Roland, Alexandre B; Caty, Stephanie N; Kabir, Nisha; Tapia, Elicio E; Trauger, Sunia A; Coloma, Luis A; O'Connell, Lauren A

2016-06-01

Poison frogs sequester chemical defenses from arthropod prey, although the details of how arthropod diversity contributes to variation in poison frog toxins remains unclear. We characterized skin alkaloid profiles in the Little Devil poison frog, Oophaga sylvatica (Dendrobatidae), across three populations in northwestern Ecuador. Using gas chromatography/mass spectrometry, we identified histrionicotoxins, 3,5- and 5,8-disubstituted indolizidines, decahydroquinolines, and lehmizidines as the primary alkaloid toxins in these O. sylvatica populations. Frog skin alkaloid composition varied along a geographical gradient following population distribution in a principal component analysis. We also characterized diversity in arthropods isolated from frog stomach contents and confirmed that O. sylvatica specialize on ants and mites. To test the hypothesis that poison frog toxin variability reflects species and chemical diversity in arthropod prey, we (1) used sequencing of cytochrome oxidase 1 to identify individual prey specimens, and (2) used liquid chromatography/mass spectrometry to chemically profile consumed ants and mites. We identified 45 ants and 9 mites in frog stomachs, including several undescribed species. We also showed that chemical profiles of consumed ants and mites cluster by frog population, suggesting different frog populations have access to chemically distinct prey. Finally, by comparing chemical profiles of frog skin and isolated prey items, we traced the arthropod source of four poison frog alkaloids, including 3,5- and 5,8-disubstituted indolizidines and a lehmizidine alkaloid. Together, the data show that toxin variability in O. sylvatica reflects chemical diversity in arthropod prey.

Frogs Call at a Higher Pitch in Traffic Noise

Directory of Open Access Journals (Sweden)

Kirsten M. Parris

2009-06-01

Full Text Available Male frogs call to attract females for mating and to defend territories from rival males. Female frogs of some species prefer lower-pitched calls, which indicate larger, more experienced males. Acoustic interference occurs when background noise reduces the active distance or the distance over which an acoustic signal can be detected. Birds are known to call at a higher pitch or frequency in urban noise, decreasing acoustic interference from low-frequency noise. Using Bayesian linear regression, we investigated the effect of traffic noise on the pitch of advertisement calls in two species of frogs, the southern brown tree frog (Litoria ewingii and the common eastern froglet (Crinia signifera. We found evidence that L. ewingii calls at a higher pitch in traffic noise, with an average increase in dominant frequency of 4.1 Hz/dB of traffic noise, and a total effect size of 123 Hz. This frequency shift is smaller than that observed in birds, but is still large enough to be detected by conspecific frogs and confer a significant benefit to the caller. Mathematical modelling predicted a 24% increase in the active distance of a L. ewingii call in traffic noise with a frequency shift of this size. Crinia signifera may also call at a higher pitch in traffic noise, but more data are required to be confident of this effect. Because frog calls are innate rather than learned, the frequency shift demonstrated by L. ewingii may represent an evolutionary adaptation to noisy conditions. The phenomenon of frogs calling at a higher pitch in traffic noise could therefore constitute an intriguing trade-off between audibility and attractiveness to potential mates.

Elastic modulus of tree frog adhesive toe pads.

Science.gov (United States)

Barnes, W Jon P; Goodwyn, Pablo J Perez; Nokhbatolfoghahai, Mohsen; Gorb, Stanislav N

2011-10-01

Previous work using an atomic force microscope in nanoindenter mode indicated that the outer, 10- to 15-μm thick, keratinised layer of tree frog toe pads has a modulus of elasticity equivalent to silicone rubber (5-15 MPa) (Scholz et al. 2009), but gave no information on the physical properties of deeper structures. In this study, micro-indentation is used to measure the stiffness of whole toe pads of the tree frog, Litoria caerulea. We show here that tree frog toe pads are amongst the softest of biological structures (effective elastic modulus 4-25 kPa), and that they exhibit a gradient of stiffness, being stiffest on the outside. This stiffness gradient results from the presence of a dense network of capillaries lying beneath the pad epidermis, which probably has a shock absorbing function. Additionally, we compare the physical properties (elastic modulus, work of adhesion, pull-off force) of the toe pads of immature and adult frogs.

Panamanian frog species host unique skin bacterial communities

Directory of Open Access Journals (Sweden)

Lisa K. Belden

2015-10-01

Full Text Available Vertebrates, including amphibians, host diverse symbiotic microbes that contribute to host disease resistance. Globally, and especially in montane tropical systems, many amphibian species are threatened by a chytrid fungus, Batrachochytrium dendrobatidis (Bd, that causes a lethal skin disease. Bd therefore may be a strong selective agent on the diversity and function of the microbial communities inhabiting amphibian skin. In Panamá, amphibian population declines and the spread of Bd have been tracked. In 2012, we completed a field survey in Panamá to examine frog skin microbiota in the context of Bd infection. We focused on three frog species and collected two skin swabs per frog from a total of 136 frogs across four sites that varied from west to east in the time since Bd arrival. One swab was used to assess bacterial community structure using 16S rRNA amplicon sequencing and to determine Bd infection status, and one was used to assess metabolite diversity, as the bacterial production of anti-fungal metabolites is an important disease resistance function. The skin microbiota of the three Panamanian frog species differed in OTU (operational taxonomic unit, ~bacterial species community composition and metabolite profiles, although the pattern was less strong for the metabolites. Comparisons between frog skin bacterial communities from Panamá and the US suggest broad similarities at the phylum level, but key differences at lower taxonomic levels. In our field survey in Panamá, across all four sites, only 35 individuals (~26% were Bd infected. There was no clustering of OTUs or metabolite profiles based on Bd infection status and no clear pattern of west-east changes in OTUs or metabolite profiles across the four sites. Overall, our field survey data suggest that different bacterial communities might be producing broadly similar sets of metabolites across frog hosts and sites. Community structure and function may not be as tightly coupled in

Biodiversity of frog haemoparasites from sub-tropical northern KwaZulu-Natal, South Africa

OpenAIRE

Edward C. Netherlands; Courtney A. Cook; Donnavan J.D. Kruger; Louis H. du Preez; Nico J. Smit

2015-01-01

Since South Africa boasts a high biodiversity of frog species, a multispecies haemoparasite survey was conducted by screening the blood from 29 species and 436 individual frogs. Frogs were collected at three localities in sub-tropical KwaZulu-Natal, a hotspot for frog diversity. Twenty per cent of the frogs were infected with at least one of five groups of parasites recorded. Intraerythrocytic parasites comprising Hepatozoon, Dactylosoma, and viral or bacterial organisms, as well as extracell...

Hydrodynamic Modeling of Santa Marta's Big Marsh

International Nuclear Information System (INIS)

Saldarriaga, Juan

1991-01-01

The ecological degradation of Santa Marta's Big Marsh and their next areas it has motivated the realization of diagnosis studies and design by several state and private entities. One of the recommended efforts for international advisory it was to develop an ecological model that allowed the handling of the water body and the economic test of alternative of solution to those ecological problems. The first part of a model of this type is in turn a model that simulates the movement of the water inside the marsh, that is to say, a hydrodynamic model. The realization of this was taken charge to the civil engineering department, on the part of Colciencias. This article contains a general explanation of the hydrodynamic pattern that this being developed by a professors group. The ecological causes are described and antecedent, the parts that conform the complex of the Santa Marta big Marsh The marsh modeling is made and it is explained in qualitative form the model type Hydrodynamic used

Unsupervised detection of salt marsh platforms: a topographic method

Science.gov (United States)

Goodwin, Guillaume C. H.; Mudd, Simon M.; Clubb, Fiona J.

2018-03-01

Salt marshes filter pollutants, protect coastlines against storm surges, and sequester carbon, yet are under threat from sea level rise and anthropogenic modification. The sustained existence of the salt marsh ecosystem depends on the topographic evolution of marsh platforms. Quantifying marsh platform topography is vital for improving the management of these valuable landscapes. The determination of platform boundaries currently relies on supervised classification methods requiring near-infrared data to detect vegetation, or demands labour-intensive field surveys and digitisation. We propose a novel, unsupervised method to reproducibly isolate salt marsh scarps and platforms from a digital elevation model (DEM), referred to as Topographic Identification of Platforms (TIP). Field observations and numerical models show that salt marshes mature into subhorizontal platforms delineated by subvertical scarps. Based on this premise, we identify scarps as lines of local maxima on a slope raster, then fill landmasses from the scarps upward, thus isolating mature marsh platforms. We test the TIP method using lidar-derived DEMs from six salt marshes in England with varying tidal ranges and geometries, for which topographic platforms were manually isolated from tidal flats. Agreement between manual and unsupervised classification exceeds 94 % for DEM resolutions of 1 m, with all but one site maintaining an accuracy superior to 90 % for resolutions up to 3 m. For resolutions of 1 m, platforms detected with the TIP method are comparable in surface area to digitised platforms and have similar elevation distributions. We also find that our method allows for the accurate detection of local block failures as small as 3 times the DEM resolution. Detailed inspection reveals that although tidal creeks were digitised as part of the marsh platform, unsupervised classification categorises them as part of the tidal flat, causing an increase in false negatives and overall platform

Unsupervised detection of salt marsh platforms: a topographic method

Directory of Open Access Journals (Sweden)

G. C. H. Goodwin

2018-03-01

Full Text Available Salt marshes filter pollutants, protect coastlines against storm surges, and sequester carbon, yet are under threat from sea level rise and anthropogenic modification. The sustained existence of the salt marsh ecosystem depends on the topographic evolution of marsh platforms. Quantifying marsh platform topography is vital for improving the management of these valuable landscapes. The determination of platform boundaries currently relies on supervised classification methods requiring near-infrared data to detect vegetation, or demands labour-intensive field surveys and digitisation. We propose a novel, unsupervised method to reproducibly isolate salt marsh scarps and platforms from a digital elevation model (DEM, referred to as Topographic Identification of Platforms (TIP. Field observations and numerical models show that salt marshes mature into subhorizontal platforms delineated by subvertical scarps. Based on this premise, we identify scarps as lines of local maxima on a slope raster, then fill landmasses from the scarps upward, thus isolating mature marsh platforms. We test the TIP method using lidar-derived DEMs from six salt marshes in England with varying tidal ranges and geometries, for which topographic platforms were manually isolated from tidal flats. Agreement between manual and unsupervised classification exceeds 94 % for DEM resolutions of 1 m, with all but one site maintaining an accuracy superior to 90 % for resolutions up to 3 m. For resolutions of 1 m, platforms detected with the TIP method are comparable in surface area to digitised platforms and have similar elevation distributions. We also find that our method allows for the accurate detection of local block failures as small as 3 times the DEM resolution. Detailed inspection reveals that although tidal creeks were digitised as part of the marsh platform, unsupervised classification categorises them as part of the tidal flat, causing an increase in false negatives

Salt Marsh Formation in the Lower Hudson River Estuary

Science.gov (United States)

Merley, Michael; Peteet, Dorothy; Hansen, James E. (Technical Monitor)

2001-01-01

Salt marshes are constant depositional environments and as a result contain accurate indicators of past relative sea level rise and salinity. The Hudson River marshes are at least twice as deep when compared to coastal marshes on either side of the mouth of the Hudson. The reason for this difference in sedimentation is unclear. This study uses macrofossil data as well as sediment stratigraphy in order to understand the formation and evolution of these marshes. The composition of seeds, roots, shoots and foraminifera, are used to indicate past sea levels. The four sites involved in this study are, from south to north, the Arthur Kill Marsh in Staten Island (40 36 N, 74 77W), Piermont marsh (N 4100; 73 55W) Croton Point (41 14 N; 73 50W) and Iona Island (41 18N, 73 58W). These are all tidally influenced but with increasing distances from the New York Bight, which gives a good spectrum of tidal influence. AMS-C14 dates on basal macrofossils will document the time of each marsh formation. Basal material from Arthur Kill (8 m) includes freshwater seeds such as Viola, Potomageton and Alnus along with Salix buds. Basal material from Croton Point (10 m) includes fibrous woody material, foraminifera and Zanichellia seeds and other brackish vegetational components. The basal material from Piermont (13.77 m) is lacking any identifiable macrofossils between 150 and 500 microns. The basal material from Iona Island (10 m) has vegetation such as Scirpus and Cyperus seeds, probably implying a brackish environment. The freshwater origin of the Arthur Kill marsh in Staten Island is significant because it predates either sea level rise or the western channel incision. Additional implications for this study include evidence for changes in river channel geomorphology. Reasons for the relatively deeper river marshes include possible basal clay compaction, high production due to river and marine nutrients as well as tectonic activity. This study provides the groundwork for more high

Modelling the long-term vertical dynamics of salt marshes

Science.gov (United States)

Zoccarato, Claudia; Teatini, Pietro

2017-04-01

Salt marshes are vulnerable environments hosting complex interactions between physical and biological processes with a strong influence on the dynamics of the marsh evolution. The estimation and prediction of the elevation of a salt-marsh platform is crucial to forecast the marsh growth or regression under different scenarios considering, for example, the potential climate changes. The long-term vertical dynamics of a salt marsh is predicted with the aid of an original finite-element (FE) numerical model accounting for the marsh accretion and compaction and for the variation rates of the relative sea level rise, i.e., land subsidence of the marsh basement and eustatic rise of the sea level. The accretion term considers the vertical sedimentation of organic and inorganic material over the marsh surface, whereas the compaction reflects the progressive consolidation of the porous medium under the increasing load of the overlying younger deposits. The modelling approach is based on a 2D groundwater flow simulator, which provides the pressure evolution within a compacting/accreting vertical cross-section of the marsh assuming that the groundwater flow obeys the relative Darcy's law, coupled to a 1D vertical geomechanical module following Terzaghi's principle of effective intergranular stress. Soil porosity, permeability, and compressibility may vary with the effective intergranular stress according to empirically based relationships. The model also takes into account the geometric non-linearity arising from the consideration of large solid grain movements by using a Lagrangian approach with an adaptive FE mesh. The element geometry changes in time to follow the deposit consolidation and the element number increases in time to follow the sedimentation of new material. The numerical model is tested on different realistic configurations considering the influence of (i) the spatial distribution of the sedimentation rate in relation to the distance from the marsh margin, (ii

COMPARATIVE TOXICITY OF DIURON ON SURVIVAL AND GROWTH OF PACIFIC TREEFROG, BULLFROG, RED-LEGGED FROG, AND AFRICAN CLAWED FROG EMBRYOS AND TADPOLES

Science.gov (United States)

The effects of the herbicide diuron on survival and growth of Pacific treefrog (Pseudacris regilla),bullfrog(Rana catesbeiana), red-legged frog(Rana aurora),and African clawed frog(Xenopus laevis)embryos and tadpoles were determined in static-renewal tests. P.regilla and X.laevis...

Tourism and the Conservation of Critically Endangered Frogs

Science.gov (United States)

Morrison, Clare; Simpkins, Clay; Castley, J. Guy; Buckley, Ralf C.

2012-01-01

Protected areas are critical for the conservation of many threatened species. Despite this, many protected areas are acutely underfunded, which reduces their effectiveness significantly. Tourism is one mechanism to promote and fund conservation in protected areas, but there are few studies analyzing its tangible conservation outcomes for threatened species. This study uses the 415 IUCN critically endangered frog species to evaluate the contribution of protected area tourism revenue to conservation. Contributions were calculated for each species as the proportion of geographic range inside protected areas multiplied by the proportion of protected area revenues derived from tourism. Geographic ranges were determined from IUCN Extent of Occurrence maps. Almost 60% (239) of critically endangered frog species occur in protected areas. Higher proportions of total range are protected in Nearctic, Australasian and Afrotopical regions. Tourism contributions to protected area budgets ranged from 5–100%. These financial contributions are highest for developing countries in the Afrotropical, Indomalayan and Neotropical regions. Data for both geographic range and budget are available for 201 critically endangered frog species with proportional contributions from tourism to species protection ranging from 0.8–99%. Tourism's financial contributions to critically endangered frog species protection are highest in the Afrotropical region. This study uses a coarse measure but at the global scale it demonstrates that tourism has significant potential to contribute to global frog conservation efforts. PMID:22984440

Which frog's legs do froggies eat? The use of DNA barcoding for identification of deep frozen frog legs (Dicroglossidae, Amphibia) commercialized in France

OpenAIRE

Ohler, Annemarie; Nicolas, Violaine

2017-01-01

International audience; Several millions frogs captured in the wild in Indonesia are sold for food yearly in French supermarkets, as deep frozen frog legs. They are commercialized as Rana macrodon, but up to 15 look-alike species might also be concerned by this trade. From December 2012 to May 2013, we bought 209 specimens of deep frozen frog legs, and identified them through a barcoding approach based on the 16S gene. Our results show that 206 out of the 209 specimens belong to Fejervarya ca...

Estuaries as filters: the role of tidal marshes in trace metal removal.

Directory of Open Access Journals (Sweden)

Johannes Teuchies

Full Text Available Flux calculations demonstrate that many estuaries are natural filters for trace metals. Yet, the underlying processes are poorly investigated. In the present study, it was hypothesized that intertidal marshes contribute significantly to the contaminant filter function of estuaries. Trace metal concentrations and sediment characteristics were measured along a transect from the subtidal, over an intertidal flat and marsh to a restored marsh with controlled reduced tide. Metal concentrations in the intertidal and restored marsh were found to be a factor two to five higher than values in the subtidal and intertidal flat sediments. High metal concentrations and high accretion rates indicate a high metal accumulation capacity of the intertidal marshes. Overbank sedimentation in the tidal marshes of the entire estuary was calculated to remove 25% to 50% of the riverine metal influx, even though marshes comprise less than 8% of the total surface of the estuary. In addition, the large-scale implementation of planned tidal marsh restoration projects was estimated to almost double the trace metal storage capacity of the present natural tidal marshes in the estuary.

Estuaries as Filters: The Role of Tidal Marshes in Trace Metal Removal

Science.gov (United States)

Teuchies, Johannes; Vandenbruwaene, Wouter; Carpentier, Roos; Bervoets, Lieven; Temmerman, Stijn; Wang, Chen; Maris, Tom; Cox, Tom J. S.; Van Braeckel, Alexander; Meire, Patrick

2013-01-01

Flux calculations demonstrate that many estuaries are natural filters for trace metals. Yet, the underlying processes are poorly investigated. In the present study, it was hypothesized that intertidal marshes contribute significantly to the contaminant filter function of estuaries. Trace metal concentrations and sediment characteristics were measured along a transect from the subtidal, over an intertidal flat and marsh to a restored marsh with controlled reduced tide. Metal concentrations in the intertidal and restored marsh were found to be a factor two to five higher than values in the subtidal and intertidal flat sediments. High metal concentrations and high accretion rates indicate a high metal accumulation capacity of the intertidal marshes. Overbank sedimentation in the tidal marshes of the entire estuary was calculated to remove 25% to 50% of the riverine metal influx, even though marshes comprise less than 8% of the total surface of the estuary. In addition, the large-scale implementation of planned tidal marsh restoration projects was estimated to almost double the trace metal storage capacity of the present natural tidal marshes in the estuary. PMID:23950927

Neuromuscular control of prey capture in frogs.

OpenAIRE

Nishikawa, K C

1999-01-01

While retaining a feeding apparatus that is surprisingly conservative morphologically, frogs as a group exhibit great variability in the biomechanics of tongue protraction during prey capture, which in turn is related to differences in neuromuscular control. In this paper, I address the following three questions. (1) How do frog tongues differ biomechanically? (2) What anatomical and physiological differences are responsible? (3) How is biomechanics related to mechanisms of neuromuscular cont...

Marsh collapse thresholds for coastal Louisiana estimated using elevation and vegetation index data

Science.gov (United States)

Couvillion, Brady R.; Beck, Holly

2013-01-01

Forecasting marsh collapse in coastal Louisiana as a result of changes in sea-level rise, subsidence, and accretion deficits necessitates an understanding of thresholds beyond which inundation stress impedes marsh survival. The variability in thresholds at which different marsh types cease to occur (i.e., marsh collapse) is not well understood. We utilized remotely sensed imagery, field data, and elevation data to help gain insight into the relationships between vegetation health and inundation. A Normalized Difference Vegetation Index (NDVI) dataset was calculated using remotely sensed data at peak biomass (August) and used as a proxy for vegetation health and productivity. Statistics were calculated for NDVI values by marsh type for intermediate, brackish, and saline marsh in coastal Louisiana. Marsh-type specific NDVI values of 1.5 and 2 standard deviations below the mean were used as upper and lower limits to identify conditions indicative of collapse. As marshes seldom occur beyond these values, they are believed to represent a range within which marsh collapse is likely to occur. Inundation depth was selected as the primary candidate for evaluation of marsh collapse thresholds. Elevation relative to mean water level (MWL) was calculated by subtracting MWL from an elevation dataset compiled from multiple data types including light detection and ranging (lidar) and bathymetry. A polynomial cubic regression was used to examine a random subset of pixels to determine the relationship between elevation (relative to MWL) and NDVI. The marsh collapse uncertainty range values were found by locating the intercept of the regression line with the 1.5 and 2 standard deviations below the mean NDVI value for each marsh type. Results indicate marsh collapse uncertainty ranges of 30.7–35.8 cm below MWL for intermediate marsh, 20–25.6 cm below MWL for brackish marsh, and 16.9–23.5 cm below MWL for saline marsh. These values are thought to represent the ranges of

Balanced Sediment Fluxes in Southern California's Mediterranean-climate Zone Salt Marshes

Science.gov (United States)

Rosencranz, J. A.; Dickhudt, P.; Ganju, N. K.; Thorne, K.; Takekawa, J.; Ambrose, R. F.; Guntenspergen, G. R.; Brosnahan, S.; MacDonald, G. M.

2015-12-01

Salt marsh elevation and geomorphic stability depends on mineral sedimentation. Many southern California, USA salt marshes import sediment during El Niño storm events, but sediment fluxes and mechanisms during dry weather are also potentially important for marsh stability. We calculated tidal creek sediment fluxes within a sediment starved 1.5 km2 salt marsh (Seal Beach) and a less modified 1 km2 marsh (Mugu) with a watershed sediment supply. We measured salt marsh plain suspended sediment concentration and vertical accretion using single stage samplers and marker horizons. At Seal Beach, a 2014 storm yielded 39 and 28 g/s mean sediment fluxes and imported 12000 and 8800 kg in a western channel. This offset 8700 kg export during two months of dry weather, while landward net fluxes in the eastern channel accounted for 33% of the import. During the storm, suspended sediment concentrations on the marsh plain increased by a factor of four; accretion was 1-2 mm near creek levees. An exceptionally high tide sequence at Mugu yielded 4.4 g/s mean sediment flux, importing 1700 kg, accounting for 20% of dry weather fluxes. Overall, low sediment fluxes were observed, suggesting that these salt marshes are currently geomorphically stable. Our results suggest that storms and exceptionally high lunar tides may play large roles, importing sediment and maintaining dry weather sediment flux balances for southern California salt marshes. However, under future climate change and sea-level rise scenarios, results suggest that balanced sediment fluxes may lead to marsh elevational instability, based on estimated mineral sediment deficits.

Marsh canopy structure changes and the Deepwater Horizon oil spill

Science.gov (United States)

Ramsey, Elijah W.; Rangoonwala, Amina; Jones, Cathleen E.

2016-01-01

Marsh canopy structure was mapped yearly from 2009 to 2012 in the Barataria Bay, Louisiana coastal region that was impacted by the 2010 Deepwater Horizon (DWH) oil spill. Based on the previously demonstrated capability of NASA's UAVSAR polarimetric synthetic aperture radar (PolSAR) image data to map Spartina alterniflora marsh canopy structure, structure maps combining the leaf area index (LAI) and leaf angle distribution (LAD, orientation) were constructed for yearly intervals that were directly relatable to the 2010 LAI-LAD classification. The yearly LAI-LAD and LAI difference maps were used to investigate causes for the previously revealed dramatic change in marsh structure from prespill (2009) to postspill (2010, spill cessation), and the occurrence of structure features that exhibited abnormal spatial and temporal patterns. Water level and salinity records showed that freshwater releases used to keep the oil offshore did not cause the rapid growth from 2009 to 2010 in marsh surrounding the inner Bay. Photointerpretation of optical image data determined that interior marsh patches exhibiting rapid change were caused by burns and burn recovery, and that the pattern of 2010 to 2011 LAI decreases in backshore marsh and extending along some tidal channels into the interior marsh were not associated with burns. Instead, the majority of 2010 to 2011 shoreline features aligned with vectors displaying the severity of 2010 shoreline oiling from the DWH spill. Although the association is not conclusive of a causal oil impact, the coexistent pattern is a significant discovery. PolSAR marsh structure mapping provided a unique perspective of marsh biophysical status that enhanced detection of change and monitoring of trends important to management effectiveness.

Loss of 'blue carbon' from coastal salt marshes following habitat disturbance.

Directory of Open Access Journals (Sweden)

Peter I Macreadie

Full Text Available Increased recognition of the global importance of salt marshes as 'blue carbon' (C sinks has led to concern that salt marshes could release large amounts of stored C into the atmosphere (as CO2 if they continue undergoing disturbance, thereby accelerating climate change. Empirical evidence of C release following salt marsh habitat loss due to disturbance is rare, yet such information is essential for inclusion of salt marshes in greenhouse gas emission reduction and offset schemes. Here we investigated the stability of salt marsh (Spartinaalterniflora sediment C levels following seagrass (Thallasiatestudinum wrack accumulation; a form of disturbance common throughout the world that removes large areas of plant biomass in salt marshes. At our study site (St Joseph Bay, Florida, USA, we recorded 296 patches (7.5 ± 2.3 m(2 mean area ± SE of vegetation loss (aged 3-12 months in a salt marsh meadow the size of a soccer field (7 275 m(2. Within these disturbed patches, levels of organic C in the subsurface zone (1-5 cm depth were ~30% lower than the surrounding undisturbed meadow. Subsequent analyses showed that the decline in subsurface C levels in disturbed patches was due to loss of below-ground plant (salt marsh biomass, which otherwise forms the main component of the long-term 'refractory' C stock. We conclude that disturbance to salt marsh habitat due to wrack accumulation can cause significant release of below-ground C; which could shift salt marshes from C sinks to C sources, depending on the intensity and scale of disturbance. This mechanism of C release is likely to increase in the future due to sea level rise; which could increase wrack production due to increasing storminess, and will facilitate delivery of wrack into salt marsh zones due to higher and more frequent inundation.

Delineation of marsh types and marsh-type change in coastal Louisiana for 2007 and 2013

Science.gov (United States)

Hartley, Stephen B.; Couvillion, Brady R.; Enwright, Nicholas M.

2017-05-30

The Bureau of Ocean Energy Management researchers often require detailed information regarding emergent marsh vegetation types (such as fresh, intermediate, brackish, and saline) for modeling habitat capacities and mitigation. In response, the U.S. Geological Survey in cooperation with the Bureau of Ocean Energy Management produced a detailed change classification of emergent marsh vegetation types in coastal Louisiana from 2007 and 2013. This study incorporates two existing vegetation surveys and independent variables such as Landsat Thematic Mapper multispectral satellite imagery, high-resolution airborne imagery from 2007 and 2013, bare-earth digital elevation models based on airborne light detection and ranging, alternative contemporary land-cover classifications, and other spatially explicit variables. An image classification based on image objects was created from 2007 and 2013 National Agriculture Imagery Program color-infrared aerial photography. The final products consisted of two 10-meter raster datasets. Each image object from the 2007 and 2013 spatial datasets was assigned a vegetation classification by using a simple majority filter. In addition to those spatial datasets, we also conducted a change analysis between the datasets to produce a 10-meter change raster product. This analysis identified how much change has taken place and where change has occurred. The spatial data products show dynamic areas where marsh loss is occurring or where marsh type is changing. This information can be used to assist and advance conservation efforts for priority natural resources.

Isolation of Brucella inopinata-Like Bacteria from White's and Denny's Tree Frogs.

Science.gov (United States)

Kimura, Masanobu; Une, Yumi; Suzuki, Michio; Park, Eun-Sil; Imaoka, Koichi; Morikawa, Shigeru

2017-05-01

Brucella inopinata strain BO1 and B. sp. strain BO2 isolated from human patients, respectively, are genetically different from classical Brucella species. We isolated bacteria of the genus Brucella from two species of wild-caught tropical frogs kept in the facilities in Japan: White's tree frog, which inhabits Oceania, and Denny's tree frog, which inhabits Southeast Asia. Phylogenetic analyses based on 16S rRNA and recA gene sequences and multilocus sequence analysis showed that two isolates of Brucella spp. showed significant similarity to BO1, BO2, and the isolates from other wild-caught frogs. These results suggest that a variety of frog species are susceptible to a novel clade of Brucella bacteria, including B. inopinata.

Assessing wildlife benefits and carbon storage from restored and natural coastal marshes in the Nisqually River Delta: Determining marsh net ecosystem carbon balance

Science.gov (United States)

Anderson, Frank; Bergamaschi, Brian; Windham-Myers, Lisamarie; Woo, Isa; De La Cruz, Susan; Drexler, Judith; Byrd, Kristin; Thorne, Karen M.

2016-06-24

Working in partnership since 1996, the U.S. Fish and Wildlife Service and the Nisqually Indian Tribe have restored 902 acres of tidally influenced coastal marsh in the Nisqually River Delta (NRD), making it the largest estuary-restoration project in the Pacific Northwest to date. Marsh restoration increases the capacity of the estuary to support a diversity of wildlife species. Restoration also increases carbon (C) production of marsh plant communities that support food webs for wildlife and can help mitigate climate change through long-term C storage in marsh soils.In 2015, an interdisciplinary team of U.S. Geological Survey (USGS) researchers began to study the benefits of carbon for wetland wildlife and storage in the NRD. Our primary goals are (1) to identify the relative importance of the different carbon sources that support juvenile chinook (Oncorhynchus tshawytscha) food webs and contribute to current and historic peat formation, (2) to determine the net ecosystem carbon balance (NECB) in a reference marsh and a restoration marsh site, and (3) to model the sustainability of the reference and restoration marshes under projected sea-level rise conditions along with historical vegetation change. In this fact sheet, we focus on the main C sources and exchanges to determine NECB, including carbon dioxide (CO2) uptake through plant photosynthesis, the loss of CO2 through plant and soil respiration, emissions of methane (CH4), and the lateral movement or leaching loss of C in tidal waters.

A Method for Mechanism Analysis of Frog Swimming Based on Motion Observation Experiments

Directory of Open Access Journals (Sweden)

Wei Zhang

2014-05-01

Full Text Available For understanding the mechanism of frog swimming under water and designing a frog-inspired swimming robot, kinematics of the frog body and trajectories of joints should be obtained. In this paper, an aquatic frog, Xenopus laevis, was chosen for analysis of swimming motions which were recorded by a high speed camera, and kinematic data were processed in a swimming data extraction platform. According to the shape features of the frog, we propose a method that the frog eyes are set as the natural data extraction markers for body motion, and kinematic data of joint trajectories are calculated by the contour points on the limbs. For the data processing, a pinhole camera model was built to transform the pixel coordinate system to world coordinate system, and the errors caused by the water refraction were analyzed and corrected. Finally, from the developed data extraction platform, the kinematic data for the analysis of swimming mechanism and design of frog-inspired robot were obtained.

Tidal Marshes as Pulsing Systems: New Estimates of Marsh-Carbon Export and Fate

Science.gov (United States)

Logozzo, L. A.; Neale, P.; Tzortziou, M.; Nelson, N.; Megonigal, P.

2016-02-01

We investigated wetland-estuarine exchanges of dissolved organic carbon (DOC), chromophoric dissolved organic matter (CDOM), dissolved inorganic carbon (DIC), and chlorophyll a (chl a) in the Chesapeake Bay Kirkpatrick wetlands, an ecosystem that is representative of brackish marshes with organic-rich soils in North America. 1 L water samples were collected every hour over multiple semidiurnal tidal cycles (24 h deployments) and the flow was continuously measured every minute over the course of the study. DIC samples were collected and filtered on site. Fluxes were estimated using the measured flow and concentrations of biogeochemical variables (DOC, DIC, and chl a as a measure of algal biomass). aCDOM(300) was used as a proxy for CDOM amount to observe variations over two semidiurnal tidal cycles. Relative to high tide water, low tide water was consistently enriched in DOC, DIC, and CDOM, whereas it was consistently depleted in chl a. Initial estimates of fluxes over the tidal cycle showed net export of DIC and DOC from the marsh, and net import of chl a into the marsh. These results are consistent with DOC flux estimates from previous studies, but our method utilizes high temporal resolution flow measurements, improving flux estimate accuracy. Transect sampling from the marsh into the sub-estuary during ebbing tide indicated a strong negative gradient in a­CDOM­(300) and non-conservative mixing with salinity. The observed gradients in CDOM absorption spectral shape (slope and slope ratios) and the relative changes in the major fluorescence components identified in 3D fluorescence excitation-emission-matrices, indicated strong photochemical degradation in the estuary and a shift from higher to lower molecular-weight organic compounds. The weaker gradients observed for DOC and DIC compared to aCDOM(300) indicate that while microbial degradation does occur, photobleaching is the dominant degradation mechanism for CDOM in the estuary.

Salt Marsh Ecosystem Responses to Restored Tidal Connectivity across a 14y Chronosequence

Science.gov (United States)

Capooci, M.; Spivak, A. C.; Gosselin, K.

2016-02-01

Salt marshes support valuable ecosystem services. Yet, human activities negatively impact salt marsh function and contribute to their loss at a global scale. On Cape Cod, MA, culverts and impoundments under roads and railways restricted tidal exchange and resulted in salt marsh conversion to freshwater wetlands. Over the past 14 y, these structures have been removed or replaced, restoring tidal connectivity between marshes and a saltwater bay. We evaluated differences in plant community composition, sediment properties, and pore water chemistry in marshes where tidal connectivity was restored using a space-for-time, or chronosequence approach. Each restored marsh was paired with a nearby, natural salt marsh to control for variability between marshes. In each restored and natural salt marsh we evaluated the plant community by measuring species-specific percent cover and biomass and collected sediment cores for bulk density and pore water analyses. Plant communities responded rapidly: salt-tolerant species, such as Spartina alterniflora, became established while freshwater species, including Phragmites australis, were less abundant within 3 y of restoration. The number of plant species was generally greater in marshes restored within 10 y, compared to older and natural marshes. Sediment bulk density varied with depth and across sites. This likely reflects differences in site history and local conditions. Deeper horizons (24-30cm) generally had higher values in restored sites while surface values (0-3cm) were similar in restored and natural marshes. Porewater pH and sulfide were similar in restored and natural marshes, suggesting rapid microbial responses to seawater reintroduction. Overall, marsh properties and processes reflecting biological communities responded rapidly to tidal restoration. However, variability between study locations underscores the potential importance of site history, local hydrology, and geomorphology in shaping marsh biogeochemistry.

Climate change and sustainability of the carbon sink in Maritime salt marshes

International Nuclear Information System (INIS)

Chmura, G.L.

2008-01-01

Ideal carbon sinks do not emit greenhouse gases (GHGs) and are sustainable with future trends in global warming. This presentation discussed the potential for using Maritime salt marshes as carbon sinks. The marshes are covered with grasses adapted to saline soils. Photosynthesis by the marsh plants and algae fix the carbon dioxide (CO 2 ) directly from the atmosphere. The carbon is then buried by mineral sediment. Wetlands without saline water are known to produce methane. The carbon in salt marsh soils does not significantly decline with depth or time. Salt marshes and mangroves store an average of 210 g of CO 2 per m 2 per year. The tidal floodwaters keep the soils wet, which allows for slow decomposition. Canadian salt marsh soils have increased in thickness at a rate of between 2 to 4 mm per year. Measurement programs have demonstrated the sustainability of inner Bay of Fundy marshes in relation to rising sea levels. Opportunities for carbon sinks also exist in dyked marshes in the region. It was concluded that the salt marshes can account for between 4 to 6 per cent of Canada's targeted reductions under the Kyoto Protocol. tabs., figs.

FROG: The Fast And Realistic OpenGL Event Displayer

CERN Document Server

Quertenmont, Loic

2009-01-01

FROG [1] [2] is a generic framework dedicated to visualisation of events in high energy experiment. It is suitable to any particular physics experiment or detector design. The code is light (< 3 MB) and fast (browsing time 20 events per second for a large High Energy Physics experiment) and can run on various operating systems, as its object-oriented structure (C++) relies on the cross-platform OPENGL [3] and GLUT [4] libraries. Moreover, FROG does not require installation of third party libraries for the visualisation. This documents describes the features and principles of FROG version 1.106, its working scheme and numerous functionalities such as: 3D and 2D visualisation, graphical user interface, mouse interface, configuration files, production of pictures of various format, integration of personal objects, etc. Finally the application of FROG for physic experiment/environement, such as Gastof, CMS, ILD, Delphes will be presented for illustration.

Courtship in Frogs

Indian Academy of Sciences (India)

well-defined physical characteristics and a clear biological meaning. ... men t most successfully were the frogs and toads (hereafter referred ... Sound Pressure Level (SPL) in decibels = 20 loglOPt/Pr where,. Pt is the .... R.erythraea (left) and mean spectrum and sonagram of the female ... and egg laying activities initiated. 5.

Herbivory drives the spread of salt marsh die-off.

Directory of Open Access Journals (Sweden)

Mark D Bertness

Full Text Available Salt marsh die-off is a Western Atlantic conservation problem that has recently spread into Narragansett Bay, Rhode Island, USA. It has been hypothesized to be driven by: 1 eutrophication decreasing plant investment into belowground biomass causing plant collapse, 2 boat wakes eroding creek banks, 3 pollution or disease affecting plant health, 4 substrate hardness controlling herbivorous crab distributions and 5 trophic dysfunction releasing herbivorous crabs from predator control. To distinguish between these hypotheses we quantified these variables at 14 Narragansett Bay salt marshes where die-off intensity ranged from <5% to nearly 98%. Nitrogen availability, wave intensity and plant growth did not explain any variation in die-off. Herbivory explained 73% of inter-site variation in die-off and predator control of herbivores and substrate hardness also varied significantly with die-off. This suggests that salt marsh die-off is being largely driven by intense herbivory via the release of herbivorous crabs from predator control. Our results and those from other marsh systems suggest that consumer control may not simply be a factor to consider in marsh conservation, but with widespread predator depletion impacting near shore habitats globally, trophic dysfunction and runaway consumption may be the largest and most urgent management challenge for salt marsh conservation.

Distribution, structure and projections of the frog intracardiac neurons.

Science.gov (United States)

Batulevicius, Darius; Skripkiene, Gertruda; Batuleviciene, Vaida; Skripka, Valdas; Dabuzinskiene, Anita; Pauza, Dainius H

2012-05-21

Histochemistry for acetylcholinesterase was used to determine the distribution of intracardiac neurons in the frog Rana temporaria. Seventy-nine intracardiac neurons from 13 frogs were labelled iontophoretically by the intracellular markers Alexa Fluor 568 and Lucifer Yellow CH to determine their structure and projections. Total neuronal number per frog heart was (Mean ± SE) 1374 ± 56. Largest collections of neurons were found in the interatrial septum (46%), atrioventricular junction (25%) and venal sinus (12%). Among the intracellularly labelled neurons, we found the cells of unipolar (71%), multipolar (20%) and bipolar (9%) types. Multiple processes originated from the neuron soma, hillock and proximal axon. These processes projected onto adjacent neuron somata and cardiac muscle fibers within the interatrial septum. Average total length of the processes from proximal axon was 348 ± 50 μm. Average total length of processes from soma and hillock was less, 118 ± 27 μm and 109 ± 24 μm, respectively. The somata of 59% of neurons had bubble- or flake-shaped extensions. Most neurons from the major nerves in the interatrial septum sent their axons towards the ventricle. In contrast, most neurons from the ventral part of the interatrial septum sent their axons towards the atria. Our findings contradict to a view that the frog intracardiac ganglia contain only non-dendritic neurons of the unipolar type. We conclude that the frog intracardiac neurons are structurally complex and diverse. This diversity may account for the complicated integrative functions of the frog intrinsic cardiac ganglia. Copyright © 2012 Elsevier B.V. All rights reserved.

Carbon Sequestration in Tidal Salt Marshes of the Northeast United States.

Science.gov (United States)

Drake, Katherine; Halifax, Holly; Adamowicz, Susan C; Craft, Christopher

2015-10-01

Tidal salt marshes provide important ecological services, habitat, disturbance regulation, water quality improvement, and biodiversity, as well as accumulation and sequestration of carbon dioxide (CO2) in vegetation and soil organic matter. Different management practices may alter their capacity to provide these ecosystem services. We examined soil properties (bulk density, percent organic C, percent N), C and N pools, C sequestration and N accumulation at four marshes managed with open marsh water management (OMWM) and four marshes that were not at U.S. Fish and Wildlife National Wildlife Refuges (NWRs) on the East Coast of the United States. Soil properties (bulk density, percent organic C, percent N) exhibited no consistent differences among managed and non-OMWM marshes. Soil organic carbon pools (0-60-cm depth) also did not differ. Managed marshes contained 15.9 kg C/m(2) compared to 16.2 kg C/m(2) in non-OMWM marshes. Proportionately, more C (per unit volume) was stored in surface than in subsurface soils. The rate of C sequestration, based on (137)Cs and (210)Pb dating of soil cores, ranged from 41 to 152 g/m(2)/year. Because of the low emissions of CH4 from salt marshes relative to freshwater wetlands and the ability to sequester C in soil, protection and restoration of salt marshes can be a vital tool for delivering key ecosystem services, while at the same time, reducing the C footprint associated with managing these wetlands.

Salt marsh persistence is threatened by predicted sea-level rise

Science.gov (United States)

Crosby, Sarah C.; Sax, Dov F.; Palmer, Megan E.; Booth, Harriet S.; Deegan, Linda A.; Bertness, Mark D.; Leslie, Heather M.

2016-11-01

Salt marshes buffer coastlines and provide critical ecosystem services from storm protection to food provision. Worldwide, these ecosystems are in danger of disappearing if they cannot increase elevation at rates that match sea-level rise. However, the magnitude of loss to be expected is not known. A synthesis of existing records of salt marsh elevation change was conducted in order to consider the likelihood of their future persistence. This analysis indicates that many salt marshes did not keep pace with sea-level rise in the past century and kept pace even less well over the past two decades. Salt marshes experiencing higher local sea-level rise rates were less likely to be keeping pace. These results suggest that sea-level rise will overwhelm most salt marshes' capacity to maintain elevation. Under the most optimistic IPCC emissions pathway, 60% of the salt marshes studied will be gaining elevation at a rate insufficient to keep pace with sea-level rise by 2100. Without mitigation of greenhouse gas emissions this potential loss could exceed 90%, which will have substantial ecological, economic, and human health consequences.

Plasticity of peripheral auditory frequency sensitivity in Emei music frog.

Science.gov (United States)

Zhang, Dian; Cui, Jianguo; Tang, Yezhong

2012-01-01

In anurans reproductive behavior is strongly seasonal. During the spring, frogs emerge from hibernation and males vocalize for mating or advertising territories. Female frogs have the ability to evaluate the quality of the males' resources on the basis of these vocalizations. Although studies revealed that central single torus semicircularis neurons in frogs exhibit season plasticity, the plasticity of peripheral auditory sensitivity in frog is unknown. In this study the seasonally plasticity of peripheral auditory sensitivity was test in the Emei music frog Babina daunchina, by comparing thresholds and latencies of auditory brainstem responses (ABRs) evoked by tone pips and clicks in the reproductive and non-reproductive seasons. The results show that both ABR thresholds and latency differ significantly between the reproductive and non-reproductive seasons. The thresholds of tone pip evoked ABRs in the non-reproductive season increased significantly about 10 dB than those in the reproductive season for frequencies from 1 KHz to 6 KHz. ABR latencies to waveform valley values for tone pips for the same frequencies using appropriate threshold stimulus levels are longer than those in the reproductive season for frequencies from 1.5 to 6 KHz range, although from 0.2 to 1.5 KHz range it is shorter in the non-reproductive season. These results demonstrated that peripheral auditory frequency sensitivity exhibits seasonal plasticity changes which may be adaptive to seasonal reproductive behavior in frogs.

The protective role of coastal marshes: a systematic review and meta-analysis.

Directory of Open Access Journals (Sweden)

Christine C Shepard

Full Text Available BACKGROUND: Salt marshes lie between many human communities and the coast and have been presumed to protect these communities from coastal hazards by providing important ecosystem services. However, previous characterizations of these ecosystem services have typically been based on a small number of historical studies, and the consistency and extent to which marshes provide these services has not been investigated. Here, we review the current evidence for the specific processes of wave attenuation, shoreline stabilization and floodwater attenuation to determine if and under what conditions salt marshes offer these coastal protection services. METHODOLOGY/PRINCIPAL FINDINGS: We conducted a thorough search and synthesis of the literature with reference to these processes. Seventy-five publications met our selection criteria, and we conducted meta-analyses for publications with sufficient data available for quantitative analysis. We found that combined across all studies (n = 7, salt marsh vegetation had a significant positive effect on wave attenuation as measured by reductions in wave height per unit distance across marsh vegetation. Salt marsh vegetation also had a significant positive effect on shoreline stabilization as measured by accretion, lateral erosion reduction, and marsh surface elevation change (n = 30. Salt marsh characteristics that were positively correlated to both wave attenuation and shoreline stabilization were vegetation density, biomass production, and marsh size. Although we could not find studies quantitatively evaluating floodwater attenuation within salt marshes, there are several studies noting the negative effects of wetland alteration on water quantity regulation within coastal areas. CONCLUSIONS/SIGNIFICANCE: Our results show that salt marshes have value for coastal hazard mitigation and climate change adaptation. Because we do not yet fully understand the magnitude of this value, we propose that decision

Tidal flushing restores the physiological condition of fish residing in degraded salt marshes.

Directory of Open Access Journals (Sweden)

Kimberly L Dibble

Full Text Available Roads, bridges, and dikes constructed across salt marshes can restrict tidal flow, degrade habitat quality for nekton, and facilitate invasion by non-native plants including Phragmites australis. Introduced P. australis contributes to marsh accretion and eliminates marsh surface pools thereby adversely affecting fish by reducing access to intertidal habitats essential for feeding, reproduction, and refuge. Our study assessed the condition of resident fish populations (Fundulus heteroclitus at four tidally restricted and four tidally restored marshes in New England invaded by P. australis relative to adjacent reference salt marshes. We used physiological and morphological indicators of fish condition, including proximate body composition (% lipid, % lean dry, % water, recent daily growth rate, age class distributions, parasite prevalence, female gravidity status, length-weight regressions, and a common morphological indicator (Fulton's K to assess impacts to fish health. We detected a significant increase in the quantity of parasites infecting fish in tidally restricted marshes but not in those where tidal flow was restored to reduce P. australis cover. Using fish length as a covariate, we found that unparasitized, non-gravid F. heteroclitus in tidally restricted marshes had significantly reduced lipid reserves and increased lean dry (structural mass relative to fish residing in reference marshes. Fish in tidally restored marshes were equivalent across all metrics relative to those in reference marshes indicating that habitat quality was restored via increased tidal flushing. Reference marshes adjacent to tidally restored sites contained the highest abundance of young fish (ages 0-1 while tidally restricted marshes contained the lowest. Results indicate that F. heteroclitus residing in physically and hydrologically altered marshes are at a disadvantage relative to fish in reference marshes but the effects can be reversed through ecological

Signatures of Biogeomorphic Feedbacks in Salt-Marsh Systems

Science.gov (United States)

D'Alpaos, Andrea; Marani, Marco

2015-04-01

Salt-marsh ecosystems which play a large role in the bio-geomorphological evolution of intertidal areas. Dense stands of halophytic vegetations which populate salt marshes largely control the dynamics of these ecosystems influencing marsh hydrodynamics and sediment transport through enhanced flow resistance and settling, and direct particle capture by plant stems. Moreover, plants are also known to increase vertical accretion through direct organic accretion. Field evidence and the results of biomorphodynamic models indeed show that the interplay between physical and biological processes generates some striking biological and morphological patterns at different scales. One such pattern, vegetation zonation, consists in a mosaic of vegetation patches, of approximately uniform composition, displaying sharp transitions in the presence of extremely small topographic gradients. Here we develop a two-dimensional model which describes the mutual interaction and adjustment between tidal flows, sediment transport and morphology mediated by vegetation influence. The model allows us describe the coupled evolution of marsh platforms and channel networks cutting through them. A number of different scenarios were modelled to analyze the changes induced in bio-geomorphic patterns by plants with different characteristics, within marshes characterized by different drainage densities, or subjected to changing environmental forcing such as rates of relative sea level rise and sediment supply. Model results emphasize that zonation patterns are a signature of bio-geomorphic feedbacks with vegetation acting as a landscape constructor which feeds back on, directly alters, and contributes to shape tidal environments. In addition, model results show that biogeomorphic feedbacks critically affect the response and the resilience of salt-marsh landscapes to changes in the environmental forcing.

Estimating patterns in Spartina alterniflora belowground biomass within salt marshes

Science.gov (United States)

O'Connell, J. L.; Mishra, D. R.; Alber, M.; Byrd, K. B.

2017-12-01

Belowground biomass of marsh plants, such as Spartina alterniflora, help prevent marsh loss because they promote soil accretion, stabilize soils and add organic matter. However, site-wide estimates of belowground biomass are difficult to obtain because root:shoot ratios vary considerably both within species and across sites. We are working to develop a data fusion tool that can predict key characteristics of S. alterniflora, including belowground biomass and plant canopy N, based on satellite imagery. We used field observations from four salt marsh locations along the Georgia Coast, including one that is studied as part of the Georgia Coastal Ecosystems LTER project. From field and remote-sensing data, we developed a hybrid modeling approach to estimate % foliar N (a surrogate for plant assimilated nutrients). Partial Least squares (PLS) regression analysis of Landsat-8 spectral bands could predict variation in foliar N and belowground biomass, suggesting this public data source might be utilized for site-wide assessment of plant biophysical variables in salt marshes. Spectrally estimated foliar N and aboveground biomass were associated with belowground biomass and root:shoot ratio in S. alterniflora. This mirrors results from a previous study from the Sacramento-San Joaquin Delta, CA, on Scheonoplectus acutus, a marsh plant found in some tidal freshwater marshes. Therefore remote sensing may be a useful tool for measuring whole plant productivity among multiple coastal marsh species.

Poison frog colors are honest signals of toxicity, particularly for bird predators.

Science.gov (United States)

Maan, Martine E; Cummings, Molly E

2012-01-01

Antipredator defenses and warning signals typically evolve in concert. However, the extensive variation across taxa in both these components of predator deterrence and the relationship between them are poorly understood. Here we test whether there is a predictive relationship between visual conspicuousness and toxicity levels across 10 populations of the color-polymorphic strawberry poison frog, Dendrobates pumilio. Using a mouse-based toxicity assay, we find extreme variation in toxicity between frog populations. This variation is significantly positively correlated with frog coloration brightness, a viewer-independent measure of visual conspicuousness (i.e., total reflectance flux). We also examine conspicuousness from the view of three potential predator taxa, as well as conspecific frogs, using taxon-specific visual detection models and three natural background substrates. We find very strong positive relationships between frog toxicity and conspicuousness for bird-specific perceptual models. Weaker but still positive correlations are found for crab and D. pumilio conspecific visual perception, while frog coloration as viewed by snakes is not related to toxicity. These results suggest that poison frog colors can be honest signals of prey unpalatability to predators and that birds in particular may exert selection on aposematic signal design. © 2011 by The University of Chicago.

Frog species richness, composition and beta-diversity in coastal Brazilian restinga habitats.

Science.gov (United States)

Rocha, C F D; Hatano, F H; Vrcibradic, D; Van Sluys, M

2008-02-01

We studied the species richness and composition of frogs in 10 restinga habitats (sand dune environments dominated by herbaceous and shrubby vegetation) along approximately 1500 km of coastal areas of three Brazilian States: Rio de Janeiro (Grumari, Maricá, Massambaba, Jurubatiba and Grussaí), Espírito Santo (Praia das Neves and Setiba) and Bahia (Prado and Trancoso). We estimated beta-diversity and similarity among areas and related these parameters to geographic distance between areas. All areas were surveyed with a similar sampling procedure. We found 28 frog species belonging to the families Hylidae, Microhylidae, Leptodactylidae and Bufonidae. Frogs in restingas were in general nocturnal with no strictly diurnal species. The richest restinga was Praia das Neves (13 species), followed by Grussaí and Trancoso (eight species in each). The commonest species in the restingas was Scinax alter (found in eight restingas), followed by Aparasphenodon brunoi (seven areas). Our data shows that richness and composition of frog communities vary consistently along the eastern Brazilian coast and, in part, the rate of species turnover is affected by the distance among areas. Geographic distance explained approximately 12% of species turnover in restingas and about 9.5% of similarity among frog assemblages. Although geographic distance somewhat affects frog assemblages, other factors (e.g. historical factors, disturbances) seem to be also involved in explaining present frog assemblage composition in each area and species turnover among areas. The frog fauna along restinga habitats was significantly nested (matrix community temperature = 26.13 degrees; p = 0.007). Our data also showed that the most hospitable restinga was Praia das Neves and indicated that this area should be protected as a conservation unit. Frog assemblage of each area seems to partially represent a nested subset of the original assemblage, although we should not ignore the importance of historical

Assessing biomass of diverse coastal marsh ecosystems using statistical and machine learning models

Science.gov (United States)

Mo, Yu; Kearney, Michael S.; Riter, J. C. Alexis; Zhao, Feng; Tilley, David R.

2018-06-01

The importance and vulnerability of coastal marshes necessitate effective ways to closely monitor them. Optical remote sensing is a powerful tool for this task, yet its application to diverse coastal marsh ecosystems consisting of different marsh types is limited. This study samples spectral and biophysical data from freshwater, intermediate, brackish, and saline marshes in Louisiana, and develops statistical and machine learning models to assess the marshes' biomass with combined ground, airborne, and spaceborne remote sensing data. It is found that linear models derived from NDVI and EVI are most favorable for assessing Leaf Area Index (LAI) using multispectral data (R2 = 0.7 and 0.67, respectively), and the random forest models are most useful in retrieving LAI and Aboveground Green Biomass (AGB) using hyperspectral data (R2 = 0.91 and 0.84, respectively). It is also found that marsh type and plant species significantly impact the linear model development (P biomass of Louisiana's coastal marshes using various optical remote sensing techniques, and highlights the impacts of the marshes' species composition on the model development and the sensors' spatial resolution on biomass mapping, thereby providing useful tools for monitoring the biomass of coastal marshes in Louisiana and diverse coastal marsh ecosystems elsewhere.

Modeling potential river management conflicts between frogs and salmonids

Science.gov (United States)

Steven F. Railsback; Bret C. Harvey; Sarah J. Kupferberg; Margaret M. Lang; Scott McBain; Hart H. Welsh

2016-01-01

Management of regulated rivers for yellow-legged frogs (Rana boylii) and salmonids exemplifies potential conflicts among species adapted to different parts of the natural flow and temperature regimes. Yellow-legged frogs oviposit in rivers in spring and depend on declining flows and warming temperatures for egg and tadpole survival and growth,...

A coupled geomorphic and ecological model of tidal marsh evolution.

Science.gov (United States)

Kirwan, Matthew L; Murray, A Brad

2007-04-10

The evolution of tidal marsh platforms and interwoven channel networks cannot be addressed without treating the two-way interactions that link biological and physical processes. We have developed a 3D model of tidal marsh accretion and channel network development that couples physical sediment transport processes with vegetation biomass productivity. Tidal flow tends to cause erosion, whereas vegetation biomass, a function of bed surface depth below high tide, influences the rate of sediment deposition and slope-driven transport processes such as creek bank slumping. With a steady, moderate rise in sea level, the model builds a marsh platform and channel network with accretion rates everywhere equal to the rate of sea-level rise, meaning water depths and biological productivity remain temporally constant. An increase in the rate of sea-level rise, or a reduction in sediment supply, causes marsh-surface depths, biomass productivity, and deposition rates to increase while simultaneously causing the channel network to expand. Vegetation on the marsh platform can promote a metastable equilibrium where the platform maintains elevation relative to a rapidly rising sea level, although disturbance to vegetation could cause irreversible loss of marsh habitat.

Plasticity of peripheral auditory frequency sensitivity in Emei music frog.

Directory of Open Access Journals (Sweden)

Dian Zhang

Full Text Available In anurans reproductive behavior is strongly seasonal. During the spring, frogs emerge from hibernation and males vocalize for mating or advertising territories. Female frogs have the ability to evaluate the quality of the males' resources on the basis of these vocalizations. Although studies revealed that central single torus semicircularis neurons in frogs exhibit season plasticity, the plasticity of peripheral auditory sensitivity in frog is unknown. In this study the seasonally plasticity of peripheral auditory sensitivity was test in the Emei music frog Babina daunchina, by comparing thresholds and latencies of auditory brainstem responses (ABRs evoked by tone pips and clicks in the reproductive and non-reproductive seasons. The results show that both ABR thresholds and latency differ significantly between the reproductive and non-reproductive seasons. The thresholds of tone pip evoked ABRs in the non-reproductive season increased significantly about 10 dB than those in the reproductive season for frequencies from 1 KHz to 6 KHz. ABR latencies to waveform valley values for tone pips for the same frequencies using appropriate threshold stimulus levels are longer than those in the reproductive season for frequencies from 1.5 to 6 KHz range, although from 0.2 to 1.5 KHz range it is shorter in the non-reproductive season. These results demonstrated that peripheral auditory frequency sensitivity exhibits seasonal plasticity changes which may be adaptive to seasonal reproductive behavior in frogs.

Frog sound identification using extended k-nearest neighbor classifier

Science.gov (United States)

Mukahar, Nordiana; Affendi Rosdi, Bakhtiar; Athiar Ramli, Dzati; Jaafar, Haryati

2017-09-01

Frog sound identification based on the vocalization becomes important for biological research and environmental monitoring. As a result, different types of feature extractions and classifiers have been employed to evaluate the accuracy of frog sound identification. This paper presents a frog sound identification with Extended k-Nearest Neighbor (EKNN) classifier. The EKNN classifier integrates the nearest neighbors and mutual sharing of neighborhood concepts, with the aims of improving the classification performance. It makes a prediction based on who are the nearest neighbors of the testing sample and who consider the testing sample as their nearest neighbors. In order to evaluate the classification performance in frog sound identification, the EKNN classifier is compared with competing classifier, k -Nearest Neighbor (KNN), Fuzzy k -Nearest Neighbor (FKNN) k - General Nearest Neighbor (KGNN)and Mutual k -Nearest Neighbor (MKNN) on the recorded sounds of 15 frog species obtained in Malaysia forest. The recorded sounds have been segmented using Short Time Energy and Short Time Average Zero Crossing Rate (STE+STAZCR), sinusoidal modeling (SM), manual and the combination of Energy (E) and Zero Crossing Rate (ZCR) (E+ZCR) while the features are extracted by Mel Frequency Cepstrum Coefficient (MFCC). The experimental results have shown that the EKNCN classifier exhibits the best performance in terms of accuracy compared to the competing classifiers, KNN, FKNN, GKNN and MKNN for all cases.

Nutrient cycling in salt marshes: An ecosystem service to reduce eutrophication

DEFF Research Database (Denmark)

Lillebø, A. I.; Sousa, A. I.; Flindt, M. R.

2013-01-01

and sequestration in salt marshes. This chapter will thus emphasise that salt marsh halophytes have a crucial role on nutrient cycling and sequestration, providing ecological services that contribute to maintain the ecosystem health. © 2012 Nova Science Publishers, Inc. All rights reserved.......Salt marshes are classified as sensitive habitat under the Habitats Directive (92/43/EEC), which aims to promote the maintenance of biodiversity. Worldwide, the reduction of salt marsh areas, as a result of anthropogenic disturbance is of major concern, and several studies on the ecology...

Inorganic Carbon and Oxygen Dynamics in a Marsh-dominated Estuary

Science.gov (United States)

Wang, S. R.; Di Iorio, D.; Cai, W. J.; Hopkinson, C.

2017-12-01

A free-water mass balance-based study was conducted to address the rate of metabolism and net carbon exchange for the tidal wetland and estuarine portion of the coastal ocean and the uncertainties associated with this approach were assessed. Open water diurnal O2 and dissolved inorganic carbon (DIC) were measured seasonally in a salt marsh-estuary in Georgia, U.S.A. with a focus on the marsh-estuary linkage associated with tidal flooding. We observed that the overall estuarine system was a net source of CO2 to the atmosphere and coastal ocean and a net sink for oceanic and atmospheric O2. Rates of metabolism were extremely high, with respiration (43 mol m-2 yr-1) greatly exceeding gross primary production (28 mol m-2 yr-1), such that the overall system was net heterotrophic. Metabolism measured with DIC were higher than with O2, which we attribute to high rates of anaerobic respiration and reduced sulfur storage in salt marsh sediments, and we assume substantial levels of anoxygenic photosynthesis. We found gas exchange from a flooded marsh is substantial, accounting for about 28% of total O2 and CO2 air-water exchange. A significant percentage of the overall estuarine aquatic metabolism is attributable to metabolism of marsh organisms during inundation. Our study suggests not rely on oceanographic stoichiometry to convert from O2to C based measurements when constructing C balances for the coastal ocean. We also suggest eddy covariance measurements of salt marsh net ecosystem exchange underestimate net ecosystem production as they do not account for lateral DIC exchange associated with marsh tidal inundation. With the increase of global temperature and sea level rise, salt marshes are likely to export more inorganic carbon to the atmosphere and the coastal ocean due to the decrease of solubility, the increase of aquatic and benthic metabolic activities and the longer marsh inundation.

Tidal marsh susceptibility to sea-level rise: importance of local-scale models

Science.gov (United States)

Thorne, Karen M.; Buffington, Kevin J.; Elliott-Fisk, Deborah L.; Takekawa, John Y.

2015-01-01

Increasing concern over sea-level rise impacts to coastal tidal marsh ecosystems has led to modeling efforts to anticipate outcomes for resource management decision making. Few studies on the Pacific coast of North America have modeled sea-level rise marsh susceptibility at a scale relevant to local wildlife populations and plant communities. Here, we use a novel approach in developing an empirical sea-level rise ecological response model that can be applied to key management questions. Calculated elevation change over 13 y for a 324-ha portion of San Pablo Bay National Wildlife Refuge, California, USA, was used to represent local accretion and subsidence processes. Next, we coupled detailed plant community and elevation surveys with measured rates of inundation frequency to model marsh state changes to 2100. By grouping plant communities into low, mid, and high marsh habitats, we were able to assess wildlife species vulnerability and to better understand outcomes for habitat resiliency. Starting study-site conditions were comprised of 78% (253-ha) high marsh, 7% (30-ha) mid marsh, and 4% (18-ha) low marsh habitats, dominated by pickleweed Sarcocornia pacifica and cordgrass Spartina spp. Only under the low sea-level rise scenario (44 cm by 2100) did our models show persistence of some marsh habitats to 2100, with the area dominated by low marsh habitats. Under mid (93 cm by 2100) and high sea-level rise scenarios (166 cm by 2100), most mid and high marsh habitat was lost by 2070, with only 15% (65 ha) remaining, and a complete loss of these habitats by 2080. Low marsh habitat increased temporarily under all three sea-level rise scenarios, with the peak (286 ha) in 2070, adding habitat for the endemic endangered California Ridgway’s rail Rallus obsoletus obsoletus. Under mid and high sea-level rise scenarios, an almost complete conversion to mudflat occurred, with most of the area below mean sea level. Our modeling assumed no marsh migration upslope due to human

Biogeographic patterns of Colombian frogs and toads

International Nuclear Information System (INIS)

Lynch, John D.; Ruiz Carranza, Pedro M; Ardila Robayo, Maria Cristina

1997-01-01

Using the data provided in Ruiz-Carranza et al. (1996) the distributions of the 540 species of frogs and toads are partitioned among ten ecogeographic units of Colombia defined on the basis of precipitation and elevation. Some lowlands areas (pacific lowlands, Amazonian) exhibit high diversity (85-94 species) but lowlands areas in general are impoverished (30-52 species), especially when contrasted with upland areas. The three Andean cordilleras harbor between 87 and 121 species of frogs and toads, demonstrating that the biodiversity of Colombia resides primarily in its montane components, not in its lowland rain forests. When biological endemicity is separated from political endemicity, five areas of high endemicity remain (the three Andean cordilleras, the Sierra Nevada de Santa Marta, and the pacific lowlands). We endeavor to explain this description by recourse to cladistic analyses of several groups of leptodactylid frogs where we find that the general pattern of diversification is by means of horizontal diversification (allopatric speciation) with a minor contribution from vertical diversification

Parasites of the mink frog (rana septentrionalis) from Minnesota, U.S.A.

Science.gov (United States)

Schotthoefer, Anna M.; Bolek, M.G.; Cole, Rebecca A.; Beasley, Val R.

2009-01-01

Twenty-two mink frogs, Rana septentrionalis, collected from two locations in Minnesota, United States, were examined for helminth and protozoan blood parasites in July 1999. A total of 16 parasite taxa were recovered including 5 larval digenean trematodes, 7 adult digenean trematodes, 3 nematodes, and I Trypanosorna species. Infracommunities were dominated by the digeneans in terms of richness and abundance. In particular, echinostomatid metacercariae in the kidneys of frogs were the most common parasites found, infecting 100% of the frogs and consisting of about 90% of all helminth individuals recovered. Gorgodera amplicava, Gorgoderina multilohata, Haernaroloechus pan'iplexus, Haernatoloechus breviplexus, Cosnwcercoides dukae, and Oswaldocruzia pipiens represent new host records. The survey presented here represents the second known helminth survey of mink frogs conducted in North America. A summary of metazoan parasites reported from mink frogs is included.

Regeneration of coastal marsh vegetation impacted by hurricanes Katrina and Rita

Science.gov (United States)

Middleton, B.A.

2009-01-01

The dynamics of plant regeneration via seed and vegetative spread in coastal wetlands dictate the nature of community reassembly that takes place after hurricanes or sea level rise. The objectives of my project were to evaluate the potential effects of saltwater intrusion and flooding of Hurricanes Katrina and Rita on seedling regeneration in coastal wetlands of the Gulf Coast. Specifically I tested hypotheses to determine for species in fresh, brackish and salt marshes of the Gulf Coast if 1) the pattern of seed germination and seedling recruitment differed with distance from the shoreline, and 2) seed germination and seedling recruitment for various species were reduced in higher levels of water depth and salinity. Regarding Hypothesis 1, seedling densities increased with distance from the shoreline in fresh and brackish water marshes while decreasing with distance from the shoreline in salt marshes. Also to test Hypothesis 1, I used a greenhouse seed bank assay to examine seed germination from seed banks collected at distances from the shoreline in response to various water depths and salinity levels using a nested factorial design. For all marsh types, the influence of water level and salinity on seed germination shifted with distance from the shoreline (i.e., three way interaction of the main effects of distance nested within site, water depth, and salinity). Data from the seed bank assay were also used to test Hypothesis 2. The regeneration of species from fresh, brackish, and salt marshes were reduced in conditions of high salinity and/or water, so that following hurricanes or sea level rise, seedling regeneration could be reduced. Among the species of these coastal marshes, there was some flexibility of response, so that at least some species were able to germinate in either high or low salinity. Salt marshes had a few fresher marsh species in the seed bank that would not germinate without a period of fresh water input (e.g., Sagittaria lancifolia) as well

Salt-Marsh Landscapes and the Signatures of Biogeomorphic Feedbacks

Science.gov (United States)

D'Alpaos, A.; Marani, M.

2014-12-01

Salt marshes are coastal ecosystems which play a large role in the bio-geomorphological evolution of intertidal areas. The dense stands of halophytic plants which populate salt-marsh systems largely contribute to govern their dynamics, influencing marsh hydrodynamics and sediment transport through enhanced flow resistance and settling, and direct particle capture by plant stems. In addition, plants are known to increase vertical accretion through direct organic accretion. Looking across the salt-marsh landscape can one see the signatures of feedbacks between landscape and biota? Field evidence and the results of biomorphodynamic models indeed show that the interplay between physical and biological processes generates some striking biological and morphological patterns at different scales. One such pattern, vegetation zonation, consists in a mosaic of vegetation patches, of approximately uniform composition, displaying sharp transitions in the presence of extremely small topographic gradients. Here we extend the model proposed by Marani et al. (2013) to a two-dimensional framework, furthermore including the effect of direct capture of sediment particles by plant stems. This allows us to account for the effect of the drainage density of tidal networks on the observed biogeomorphic patterns and to model the coupled evolution of marsh platforms and channel networks cutting through them. A number of different scenarios have been modelled to analyze the changes induced in bio-geomorphic patterns by plants with different characteristics, within marshes characterized by different drainage densities, or subjected to changing environmental forcing such as rates of relative sea level rise and sediment supply. Model results emphasize that zonation patterns are a signature of bio-geomorphic feedbacks with vegetation acting as a landscape constructor which feeds back on, directly alters, and contributes to shape tidal environments. In addition, model results show that

Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes

Science.gov (United States)

Rosencranz, Jordan A.; Ganju, Neil K.; Ambrose, Richard F.; Brosnahan, Sandra M.; Dickhudt, Patrick J.; Guntenspergen, Glenn R.; MacDonald, Glen M.; Takekawa, John Y.; Thorne, Karen M.

2016-01-01

Salt marsh elevation and geomorphic stability depends on mineral sedimentation. Many Mediterranean-climate salt marshes along southern California, USA coast import sediment during El Niño storm events, but sediment fluxes and mechanisms during dry weather are potentially important for marsh stability. We calculated tidal creek sediment fluxes within a highly modified, sediment-starved, 1.5-km2 salt marsh (Seal Beach) and a less modified 1-km2marsh (Mugu) with fluvial sediment supply. We measured salt marsh plain suspended sediment concentration and vertical accretion using single stage samplers and marker horizons. At Seal Beach, a 2014 storm yielded 39 and 28 g/s mean sediment fluxes and imported 12,000 and 8800 kg in a western and eastern channel. Western channel storm imports offset 8700 kg exported during 2 months of dry weather, while eastern channel storm imports augmented 9200 kg imported during dry weather. During the storm at Mugu, suspended sediment concentrations on the marsh plain increased by a factor of four; accretion was 1–2 mm near creek levees. An exceptionally high tide sequence yielded 4.4 g/s mean sediment flux, importing 1700 kg: 20 % of Mugu’s dry weather fluxes. Overall, low sediment fluxes were observed, suggesting that these salt marshes are geomorphically stable during dry weather conditions. Results suggest storms and high lunar tides may play large roles, importing sediment and maintaining dry weather sediment flux balances for southern California salt marshes. However, under future climate change and sea level rise scenarios, results suggest that balanced sediment fluxes lead to marsh elevational instability based on estimated mineral sediment deficits.

Accretion rates in salt marshes in the Eastern Scheldt, South-west Netherlands

International Nuclear Information System (INIS)

Oenema, O.; DeLaune, R.D.

1988-01-01

Vertical accretion and sediment accumulation rates were determined from the distribution of 137 Cs in sediment cores, from historic documents, and from artificial white-coloured tracer layers in salt marshes in the Eastern Scheldt. Salt marsh accretion is related to the steady rise of the mean high tide in the Eastern Scheldt during the last few decades. Mean accretion rates vary from 0.4-0.9 cm year -1 in the St Annaland marsh to 1.0-1.5 cm year -1 in the Rattekaai marsh. Sediment accumulation in accreting marshes exceed the loss of sediment, by retreat of the marsh cliffs, by a factor of 10-20. Short-term spatial and temporal variations in accretion rates are large. Spatial variations are associated with levee and backmarsh sites and the density of marsh vegetation. Temporal variations are mainly related to fluctuations in hydrodynamic conditions. The net vertical accretion rate of organic carbon is 0.4 ± 0.1 kg m -2 year -1 , approximately half this rate is associated with the current deposit, and the other half with net additions from the belowground root biomass. A simple model for the root biomass distribution of Spartina anglica with depth and the depth-dependent fossilization of root biomass in sediments of the Rattekaai marsh is presented. (author)

Frog species richness, composition and beta-diversity in coastal Brazilian restinga habitats

Directory of Open Access Journals (Sweden)

CFD. Rocha

Full Text Available We studied the species richness and composition of frogs in 10 restinga habitats (sand dune environments dominated by herbaceous and shrubby vegetation along approximately 1500 km of coastal areas of three Brazilian States: Rio de Janeiro (Grumari, Maricá, Massambaba, Jurubatiba and Grussaí, Espírito Santo (Praia das Neves and Setiba and Bahia (Prado and Trancoso. We estimated beta-diversity and similarity among areas and related these parameters to geographic distance between areas. All areas were surveyed with a similar sampling procedure. We found 28 frog species belonging to the families Hylidae, Microhylidae, Leptodactylidae and Bufonidae. Frogs in restingas were in general nocturnal with no strictly diurnal species. The richest restinga was Praia das Neves (13 species, followed by Grussaí and Trancoso (eight species in each. The commonest species in the restingas was Scinax alter (found in eight restingas, followed by Aparasphenodon brunoi (seven areas. Our data shows that richness and composition of frog communities vary consistently along the eastern Brazilian coast and, in part, the rate of species turnover is affected by the distance among areas. Geographic distance explained approximately 12% of species turnover in restingas and about 9.5% of similarity among frog assemblages. Although geographic distance somewhat affects frog assemblages, other factors (e.g. historical factors, disturbances seem to be also involved in explaining present frog assemblage composition in each area and species turnover among areas. The frog fauna along restinga habitats was significantly nested (matrix community temperature = 26.13°; p = 0.007. Our data also showed that the most hospitable restinga was Praia das Neves and indicated that this area should be protected as a conservation unit. Frog assemblage of each area seems to partially represent a nested subset of the original assemblage, although we should not ignore the importance of historical

Propulsive efficiency of frog swimming with different feet and swimming patterns

Directory of Open Access Journals (Sweden)

Fan Jizhuang

2017-04-01

Full Text Available Aquatic and terrestrial animals have different swimming performances and mechanical efficiencies based on their different swimming methods. To explore propulsion in swimming frogs, this study calculated mechanical efficiencies based on data describing aquatic and terrestrial webbed-foot shapes and swimming patterns. First, a simplified frog model and dynamic equation were established, and hydrodynamic forces on the foot were computed according to computational fluid dynamic calculations. Then, a two-link mechanism was used to stand in for the diverse and complicated hind legs found in different frog species, in order to simplify the input work calculation. Joint torques were derived based on the virtual work principle to compute the efficiency of foot propulsion. Finally, two feet and swimming patterns were combined to compute propulsive efficiency. The aquatic frog demonstrated a propulsive efficiency (43.11% between those of drag-based and lift-based propulsions, while the terrestrial frog efficiency (29.58% fell within the range of drag-based propulsion. The results illustrate the main factor of swimming patterns for swimming performance and efficiency.

Nitrous oxide emissions could reduce the blue carbon value of marshes on eutrophic estuaries

Science.gov (United States)

Roughan, Brittney L.; Kellman, Lisa; Smith, Erin; Chmura, Gail L.

2018-04-01

The supply of nitrogen to ecosystems has surpassed the Earth’s Planetary Boundary and its input to the marine environment has caused estuarine waters to become eutrophic. Excessive supply of nitrogen to salt marshes has been associated with shifts in species’ distribution and production, as well as marsh degradation and loss. Our study of salt marshes in agriculturally intensive watersheds shows that coastal eutrophication can have an additional impact. We measured gas fluxes from marsh soils and verified emissions of nitrous oxide (N2O) in nitrogen-loaded marshes while the reference marsh was a sink for this gas. Salt marsh soils are extremely efficient carbon sinks, but emissions of N2O, a greenhouse gas 298 times more potent than CO2, reduces the value of the carbon sink, and in some marshes, may counterbalance any value of stored carbon towards mitigation of climate change. Although more research is merited on the nitrogen transformations and carbon storage in eutrophic marshes, the possibility of significant N2O emissions should be considered when evaluating the market value of carbon in salt marshes subject to high levels of nitrogen loading.

Halophyte vegetation influences in salt marsh retention capacity for heavy metals

International Nuclear Information System (INIS)

Reboreda, Rosa; Cacador, Isabel

2007-01-01

We analysed concentrations of Cu, Cd and Pb in above and belowground tissues of the halophyte species Halimione portulacoides and Spartina maritima, as well as in sediments and pore water between the roots in a Tagus estuary salt marsh (Portugal). From these results we calculated the pools of metals in the compartments mentioned above. Relative percentages of accumulation in each pool were also determined. Our aim was to determine how the type of vegetation in the salt marsh affects overall metal retention capacity of the system. It was concluded that areas colonised by H. portulacoides are potential sources of Cu, Cd and Pb to the marsh ecosystem, whereas areas colonised by S. maritima are more effective sinks at least for Cu and Cd. Consequently, S. maritima seems to contribute more effectively to the stabilisation of metals in salt marsh sediments, reducing their availability to the estuarine system. - The type of vegetal cover can affect the overall retention capacity of a salt marsh as well as the functioning of the salt marsh as a sink or source of metals to the estuarine system

Tidal salt marshes of the southeast Atlantic Coast: A community profile

Energy Technology Data Exchange (ETDEWEB)

Wiegert, R.G.; Freeman, B.J.

1990-09-01

This report is part of a series of community profiles on the ecology of wetland and marine communities. This particular profile considers tidal marshes of the southeastern Atlantic coast, from North Carolina south to northern Florida. Alone among the earth's ecosystems, coastal communities are subjected to a bidirectional flooding sometimes occurring twice each day; this flooding affects successional development, species composition, stability, and productivity. In the tidally influenced salt marsh, salinity ranges from less than 1 ppt to that of seawater. Dominant plant species include cordgrasses (Spartina alterniflora and S. cynosuroides), black needlerush (Juncus romerianus), and salt marsh bulrush (Scirpus robustus). Both terrestrail and aquatic animals occur in salt marshes and include herons, egrets ospreys (Pandion haliaetus), bald eagles (Haliaeetus leucocephalus), alligators (Alligator Mississippiensis), manatees (Trichecus manatus), oysters, mussels, and fiddler crabs. Currently, the only significant direct commercial use of the tidal salt marshes is by crabbers seeking the blue crab Callinectes sapidus, but the marshes are quite important recreationally, aesthetically, and educationally. 151 refs., 45 figs., 6 tabs.

Biogenic silica in tidal freshwater marsh sediments and vegetation (Schelde estuary, Belgium)

NARCIS (Netherlands)

Struyf, E.; van Damme, S.; Gribsholt, B.; Middelburg, J.J.; Meire, P.

2005-01-01

To date, estuarine ecosystem research has mostly neglected silica cycling in freshwater intertidal marshes. However, tidal marshes can store large amounts of biogenic silica (BSi) in vegetation and sediment. BSi content of the typical freshwater marsh plants Phragmites australis, Impatiens

Introducing the Forensic Research/Reference on Genetics knowledge base, FROG-kb.

Science.gov (United States)

Rajeevan, Haseena; Soundararajan, Usha; Pakstis, Andrew J; Kidd, Kenneth K

2012-09-01

Online tools and databases based on multi-allelic short tandem repeat polymorphisms (STRPs) are actively used in forensic teaching, research, and investigations. The Fst value of each CODIS marker tends to be low across the populations of the world and most populations typically have all the common STRP alleles present diminishing the ability of these systems to discriminate ethnicity. Recently, considerable research is being conducted on single nucleotide polymorphisms (SNPs) to be considered for human identification and description. However, online tools and databases that can be used for forensic research and investigation are limited. The back end DBMS (Database Management System) for FROG-kb is Oracle version 10. The front end is implemented with specific code using technologies such as Java, Java Servlet, JSP, JQuery, and GoogleCharts. We present an open access web application, FROG-kb (Forensic Research/Reference on Genetics-knowledge base, http://frog.med.yale.edu), that is useful for teaching and research relevant to forensics and can serve as a tool facilitating forensic practice. The underlying data for FROG-kb are provided by the already extensively used and referenced ALlele FREquency Database, ALFRED (http://alfred.med.yale.edu). In addition to displaying data in an organized manner, computational tools that use the underlying allele frequencies with user-provided data are implemented in FROG-kb. These tools are organized by the different published SNP/marker panels available. This web tool currently has implemented general functions possible for two types of SNP panels, individual identification and ancestry inference, and a prediction function specific to a phenotype informative panel for eye color. The current online version of FROG-kb already provides new and useful functionality. We expect FROG-kb to grow and expand in capabilities and welcome input from the forensic community in identifying datasets and functionalities that will be most helpful

Birds and frogs in mathematics and physics

Energy Technology Data Exchange (ETDEWEB)

Dyson, Freeman J [Institute for Advanced Study, Princeton, NJ (United States)

2010-11-15

Some scientists are birds, others are frogs. Birds fly high in the air and survey broad vistas of mathematics out to the far horizon. They delight in concepts that unify our thinking and bring together diverse problems from different parts of the landscape. Frogs live in the mud below and see only the flowers that grow nearby. They delight in the details of particular objects, and they solve problems one at a time. A brief history of mathematics and its applications in physics is presented in this article. (from the history of physics)

Birds and frogs in mathematics and physics

International Nuclear Information System (INIS)

Dyson, Freeman J

2010-01-01

Some scientists are birds, others are frogs. Birds fly high in the air and survey broad vistas of mathematics out to the far horizon. They delight in concepts that unify our thinking and bring together diverse problems from different parts of the landscape. Frogs live in the mud below and see only the flowers that grow nearby. They delight in the details of particular objects, and they solve problems one at a time. A brief history of mathematics and its applications in physics is presented in this article. (from the history of physics)

Spatial patterns in accretion on barrier-island salt marshes

NARCIS (Netherlands)

Groot, de A.V.; Veeneklaas, R.M.; Kuijper, D.P.J.; Bakker, J.P.

2011-01-01

On minerogenic barrier-island salt marshes, sedimentation is spatially heterogeneous. Although the main forcing factors for sedimentation are known, much less is known about the characteristic sizes of this spatial patterning. Such patterning gives information on the spatial component of salt-marsh

Chasing boundaries and cascade effects in a coupled barrier-marsh-lagoon system

Science.gov (United States)

Lorenzo-Trueba, Jorge; Mariotti, Giulio

2017-08-01

The long-term dynamic evolution of an idealized barrier-marsh-lagoon system experiencing sea-level rise is studied by coupling two existing numerical models. The barrier model accounts for the interaction between shoreface dynamics and overwash flux, which allows the occurrence of barrier drowning. The marsh-lagoon model includes both a backbarrier marsh and an interior marsh, and accounts for the modification of the wave regime associated with changes in lagoon width and depth. Overwash, the key process that connects the barrier shoreface with the marsh-lagoon ecosystems, is formulated to account for the role of the backbarrier marsh. Model results show that a number of factors that are not typically associated with the dynamics of coastal barriers can enhance the rate of overwash-driven landward migration by increasing backbarrier accommodation space. For instance, lagoon deepening could be triggered by marsh edge retreat and consequent export of fine sediment via tidal dispersion, as well as by an expansion of inland marshes and consequent increase in accommodation space to be filled in with sediment. A deeper lagoon results in a larger fraction of sediment overwash being subaqueous, which coupled with a slow shoreface response sending sediment onshore can trigger barrier drowning. We therefore conclude that the supply of fine sediments to the back-barrier and the dynamics of both the interior and backbarrier marsh can be essential for maintaining the barrier system under elevated rates of sea-level rise. Our results highlight the importance of considering barriers and their associated backbarriers as part of an integrated system in which sediment is exchanged.

Coatal salt marshes and mangrove swamps in China

Science.gov (United States)

Yang, Shi-Lun; Chen, Ji-Yu

1995-12-01

Based on plant specimen data, sediment samples, photos, and sketches from 45 coastal crosssections, and materials from two recent countrywide comprehensive investigations on Chinese coasts and islands, this paper deals with China’s vegetative tidal-flats: salt marshes and mangrove swamps. There are now 141700 acres of salt marshes and 51000 acres of mangrove swamps which together cover about 30% of the mud-coast area of the country and distribute between 18°N (Southern Hainan Island) and 41 °N (Liaodong Bay). Over the past 45 years, about 1750000 acres of salt marshes and 49400 acres of mangrove swamps have been reclaimed. The 2.0×109 tons of fine sediments input by rivers into the Chinese seas form extensive tidal flats, the soil basis of coastal helophytes. Different climates result in the diversity of vegetation. The 3˜8 m tidal range favors intertidal zone development. Of over 20 plant species in the salt marshes, native Suaeda salsa, Phragmites australis, Aeluropus littoralis, Zoysia maerostachys, Imperata cylindrica and introduced Spartina anglica are the most extensive in distribution. Of the 41 mangrove swamps species, Kandelia candel, Bruguiera gymnorrhiza, Excoecaria agallocha and Avicennia marina are much wider in latitudinal distribution than the others. Developing stages of marshes originally relevant to the evolution of tidal flats are given out. The roles of pioneer plants in decreasing flood water energy and increasing accretion rate in the Changjiang River delta are discussed.

Accretion rates in salt marshes in the Eastern Scheldt, South-West Netherlands

Energy Technology Data Exchange (ETDEWEB)

Oenema, O.; DeLaune, R.D.

1988-04-01

Vertical accretion and sediment accumulation rates were determined from the distribution of /sup 137/Cs in sediment cores, from historic documents, and from artificial white-coloured tracer layers in salt marshes in the Eastern Scheldt. Salt marsh accretion is related to the steady rise of the mean high tide in the Eastern Scheldt during the last few decades. Mean accretion rates vary from 0.4-0.9 cm year/sup -1/ in the St Annaland marsh to 1.0-1.5 cm year/sup -1/ in the Rattekaai marsh. Sediment accumulation in accreting marshes exceed the loss of sediment, by retreat of the marsh cliffs, by a factor of 10-20. Short-term spatial and temporal variations in accretion rates are large. Spatial variations are associated with levee and backmarsh sites and the density of marsh vegetation. Temporal variations are mainly related to fluctuations in hydrodynamic conditions. The net vertical accretion rate of organic carbon is 0.4 +- 0.1 kg m/sup -2/ year/sup -1/, approximately half this rate is associated with the current deposit, and the other half with net additions from the belowground root biomass. A simple model for the root biomass distribution of Spartina anglica with depth and the depth-dependent fossilization of root biomass in sediments of the Rattekaai marsh is presented.

Analysis of change in marsh types of coastal Louisiana, 1978-2001

Science.gov (United States)

Linscombe, Robert G.; Hartley, Stephen B.

2011-01-01

Scientists and geographers have provided multiple datasets and maps to document temporal changes in vegetation types and land-water relationships in coastal Louisiana. Although these maps provide useful historical information, technological limitations prevented these and other mapping efforts from providing sufficiently detailed calculations of areal changes and shifts in habitat coverage. The current analysis of habitat change draws upon these past mapping efforts but is based on an advanced, geographic information system dataset that was created by using Landsat 5 Thematic Mapper imagery and digital orthophoto quarter quadrangles. The objective of building this dataset was to more specifically define land-water relationships over time in coastal Louisiana, and it provides the most detailed analysis of vegetation shifts to date. In the current study, we have attempted to explain these vegetation shifts by interpreting them in the context of rainfall records, data from the Palmer Drought Severity Index, and salinity data. During the 23 years we analyzed, total marsh acreage decreased, with conversion of marsh to open water. Furthermore, the general trend across coastal Louisiana was a shift to increasingly fresh marsh types. Although fresh marsh remained almost the same during the 1978-88 study period, there were greater increases during the 1988-2001 study periods. Intermediate marsh followed the same pattern, whereas brackish marsh showed a reverse (decreasing) pattern. Changes in saline (saltwater) marsh were minimal. Interpreting shifts in marsh vegetation types by using climate and salinity data provides better understanding of factors influencing these changes and, therefore, can improve our ability to make predictions about future marsh loss related to vegetation changes. Results of our study indicate that precipitation fluctuations prior to vegetation surveys impacted salinities differently across the coast. For example, a wet 6 months prior to the survey

Use of femur bone density to segregate wild from farmed Dybowski's frog (Rana dybowskii).

Science.gov (United States)

Yang, Shu Hui; Huang, Xiao Ming; Xia, Rui; Xu, Yan Chun; Dahmer, Thomas D

2011-04-15

Wildlife has been utilized by humans throughout history and demand continues to grow today. Farming of wildlife can supplement the supply of wild-harvested wildlife products and, in theory, can reduce pressure on free-ranging populations. However, poached wildlife products frequently enter legal markets where they are fraudulently sold as farmed wildlife products. To effectively close this illegal trade in wild-captured wildlife, there is a need to discriminate wild products from farmed products. Because of the strong market demand for wild-captured frog meat and the resulting strong downward pressure on wild populations, we undertook research to develop a method to discriminate wild from farmed Dybowski's frog (Rana dybowskii) based on femur bone density. We measured femur bone density (D(f)) as the ratio of bone mass to bone volume. D(f) of wild frogs revealed a slightly increasing linear trend with increasing age (R(2)=0.214 in males and R(2)=0.111 in females, p=0.000). Wild males and wild females of age classes from 2 to ≥ 5 years had similar D(f) values. In contrast, 2-year-old farmed frogs showed significantly higher D(f) values (p=0.000) among males (mean D(f)=0.623 ± 0.011 g/ml, n=32) than females (mean D(f)=0.558 ± 0.011 g/ml, n=27). For both sexes, D(f) of wild frogs was significantly higher than that of farmed frogs (p=0.000). Among males, 87.5% (28 of 32 individuals) of farmed frogs were correctly identified as farmed frogs and 86.3% (69 of 80 individuals) of wild frogs were correctly identified as wild frogs. These results suggest that femur bone density is one reliable tool for discriminating between wild and farmed Dybowski's frog. This study also highlights a novel strategy with explicit forensic potential to discriminate wild from captive bred wildlife species. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

High spatial variability in biogeochemical rates and microbial communities across Louisiana salt marsh landscapes

Science.gov (United States)

Roberts, B. J.; Chelsky, A.; Bernhard, A. E.; Giblin, A. E.

2017-12-01

Salt marshes are important sites for retention and transformation of carbon and nutrients. Much of our current marsh biogeochemistry knowledge is based on sampling at times and in locations that are convenient, most often vegetated marsh platforms during low tide. Wetland loss rates are high in many coastal regions including Louisiana which has the highest loss rates in the US. This loss not only reduces total marsh area but also changes the relative allocation of subhabitats in the remaining marsh. Climate and other anthropogenic changes lead to further changes including inundation patterns, redox conditions, salinity regimes, and shifts in vegetation patterns across marsh landscapes. We present results from a series of studies examining biogeochemical rates, microbial communities, and soil properties along multiple edge to interior transects within Spartina alterniflora across the Louisiana coast; between expanding patches of Avicennia germinans and adjacent S. alterniflora marshes; in soils associated with the four most common Louisiana salt marsh plants species; and across six different marsh subhabitats. Spartina alterniflora marsh biogeochemistry and microbial populations display high spatial variability related to variability in soil properties which appear to be, at least in part, regulated by differences in elevation, hydrology, and redox conditions. Differences in rates between soils associated with different vegetation types were also related to soil properties with S. alterniflora soils often yielding the lowest rates. Biogeochemical process rates vary significantly across marsh subhabitats with individual process rates differing in their hotspot habitat(s) across the marsh. Distinct spatial patterns may influence the roles that marshes play in retaining and transforming nutrients in coastal regions and highlight the importance of incorporating spatial sampling when scaling up plot level measurements to landscape or regional scales.

Determination of age, longevity and age at reproduction of the frog ...

Indian Academy of Sciences (India)

Unknown

separately in plastic bags and placed in 5 different aquaria. Each frog was anaesthetized (using anaesthetic ether), the body mass ... bone of each frog, were measured using an ocular .... One of the problems generally associated with skeleto-.

Comparison of trace metals in South Carolina floodplain and marsh sediments

International Nuclear Information System (INIS)

Gardner, L.R.; Chen, H.S.; Settlemyre, J.L.

1978-01-01

A comparative study of trace metals (copper, zinc, lead, and molybdenum) in sediment cores from a pristine marsh near North Inlet, S.C., a polluted marsh near Charleston Harbor, S.C., and South Carolina river floodplains indicates that the Charleston Harbor marsh samples have significantly higher concentrations of copper, zinc, and lead than either North Inlet samples or river floodplain samples. It is not clear, however, whether this result can be attributed to industrial contamination because the peak concentrations of copper and zinc in cores from the Charleston Harbor marsh occur at depths between 10 and 60 cm rather than at or near the sediment surface, as is the case for well-documented occurrences of contaminated marine sediments. Also, both marsh areas show similar linear relationships for copper vs. zinc, which suggest that both areas received the same relative inputs of copper and zinc from similar or identical sources and that the differences in concentrations between the two areas are due to differences in the rates of accumulation. Natural mechanisms are suggested to explain the higher content of copper and zinc in Charleston Harbor vs. North Inlet marsh sediments and the variable depth of peak copper and zinc concentrations

Female preferences for aposematic signal components in a polymorphic poison frog

NARCIS (Netherlands)

Maan, Martine E.; Cummings, Molly E.

Aposematic signals may be subject to conflicting selective pressures from predators and conspecifics. We studied female preferences for different components of aposematic coloration in the polymorphic poison frog Oophaga pumilio across several phenotypically distinct populations. This frog shows

Antimicrobial peptides from the skins of North American frogs.

Science.gov (United States)

Conlon, J Michael; Kolodziejek, Jolanta; Nowotny, Norbert

2009-08-01

North America is home to anuran species belonging to the families Bufonidae, Eleutherodactylidae, Hylidae, Leiopelmatidae, Ranidae, and Scaphiopodidae but antimicrobial peptides have been identified only in skin secretions and/or skin extracts of frogs belonging to the Leiopelmatidae ("tailed frogs") and Ranidae ("true frogs"). Eight structurally-related cationic alpha-helical peptides with broad-spectrum antibacterial activity, termed ascaphins, have been isolated from specimens of Ascaphus truei (Leiopelmatidae) occupying a coastal range. Characterization of orthologous antimicrobial peptides from Ascaphus specimens occupying an inland range supports the proposal that this population should be regarded as a separate species A. montanus. Ascaphin-8 shows potential for development into a therapeutically valuable anti-infective agent. Peptides belonging to the brevinin-1, esculentin-1, esculentin-2, palustrin-1, palustrin-2, ranacyclin, ranatuerin-1, ranatuerin-2, and temporin families have been isolated from North American ranids. It is proposed that "ranalexins" represent brevinin-1 peptides that have undergone a four amino acid residue internal deletion. Current taxonomic recommendations divide North American frogs from the family Ranidae into two genera: Lithobates and Rana. Cladistic analysis based upon the amino acid sequences of the brevinin-1 peptides provides strong support for this assignment.

Environmental and Host Effects on Skin Bacterial Community Composition in Panamanian Frogs

Directory of Open Access Journals (Sweden)

Brandon J. Varela

2018-02-01

Full Text Available Research on the amphibian skin microbiota has focused on identifying bacterial taxa that deter a pathogenic chytrid fungus, and on describing patterns of microbiota variation. However, it remains unclear how environmental variation affects amphibian skin bacterial communities, and whether the overall functional diversity of the amphibian skin microbiota is associated to such variation. We sampled skin microbial communities from one dendrobatoid frog species across an environmental gradient along the Panama Canal, and from three dendrobatoid frog species before and after the onset of the wet season in one site. We found frog skin microbial alpha diversity to be highest in frogs from sites with low soil pH, but no clear effect of the onset of the wet season. However, we found frog skin microbial community structure to be affected by soil pH and the onset of the wet season, which also resulted in a decrease in between-sample variation. Across the sampled frog species, bacterial functional groups changed with the onset of the wet season, with certain bacterial functional groups entirely disappearing and others differing in their relative abundances. In particular, we found the proportion of Bd-inhibitory bacteria to correlate with mean soil pH, and to increase in two of the frog species with the onset of the wet season. Taken together, our results suggest that structure and predicted function of amphibian bacterial skin communities may be influenced by environmental variables such as pH and precipitation, site effects, and host effects.

Mosquitoes Associated with Ditch-Plugged and Control Tidal Salt Marshes on the Delmarva Peninsula

Directory of Open Access Journals (Sweden)

Paul T. Leisnham

2011-07-01

Full Text Available A study was conducted during the summer of 2009 (from July to September to characterize mosquito communities among different habitats in five historically ditched tidal salt marshes and three adjacent wooded areas in the E.A. Vaughn Wetland Management Area on the Maryland Delmarva Peninsula, USA. Study marshes are characteristic of Atlantic coastal salt marshes that had undergone grid ditching from the 1930s to 1950s. In the autumn of 2008 (October and November ditches were plugged near their outlets in two (‘experimental’ marshes with the aim to restore their natural tidal hydrology. The three other marshes were not plugged. Marshes were sampled from July to September in 2009 by using standard dip count method. A total of 2,457 mosquito larvae representing six species were collected on 15.4% (86/557 of all sample occasions and 399 adults representing four mosquito species were collected from landing counts. Aedes sollicitans, Anopheles bradleyi and Culex salinarius were the most common species collected in larval habitats, and Ae. sollicitans was the most common adult collected. Wooded habitats had more total mosquitoes, were also more frequently occupied by mosquitoes and had higher densities of mosquitoes than marsh habitats. Almost all larvae collected from marshes were from one experimental and one control site. The majority of larvae at the control site were Ae. sollicitans in marsh pannes while Cx. salinarius, An. bradleyi, Ae. cantator, and Ae. sollicitans were collected in high numbers from ditches at the experimental site. We found a difference in the proportion of marsh pannes occupied by Ae. sollicitans but not total mosquitoes sampled 4–5 days after spring tide events than on other occasions. Salinity measures of 42 larval habitats showed lower median salinity in mosquito-occupied habitats (11.5 ppt than unoccupied habitats (20.1 ppt, and in habitats in wooded areas followed by ditches and pannes in marsh areas. The results of

Pathological Study of Blood Parasites in Rice Field Frogs, Hoplobatrachus rugulosus (Wiegmann, 1834

Directory of Open Access Journals (Sweden)

Achariya Sailasuta

2011-01-01

Full Text Available One hundred and forty adult rice field frogs, Hoplobatrachus rugulosus (Wiegmann, 1834, were collected in Srakaew province, Thailand. For blood parasite examination, thin blood smears were made and routinely stained with Giemsa. The results showed that 70% of the frogs (98/140 were infected with 5 species of blood parasites, including a Trypanosoma rotatorium-like organism, Trypanosoma chattoni, Hepatozoon sp. a, Hepatozoon sp. b, and Lankesterella minima. Pathological examination of the liver, lung, spleen, and kidney of the frogs that were apparently infected with one of these blood parasites were collected and processed by routine histology and subsequently stained with haematoxylin and eosin. Histopathological findings associated with the Trypanosoma rotatorium-like organism and Trypanosoma chattoni-infected frogs showed no pathological lesions. Hepatozoon sp. a and Hepatozoon sp. b-infected frogs developed inflammatory lesions predominantly in the liver, demonstrating granuloma-like lesions with Hepatozoon sp. meronts at the centre. Tissue sections of Lankesterella minima-infected frogs also showed lesions. Liver and spleen showed inflammatory lesions with an accumulation of melanomacrophage centres (MMCs surrounding the meronts and merozoites. It is suggested that Hepatozoon sp. a, Hepatozoon sp. b, and Lankesterella minima-infections are capable of producing inflammatory lesions in the visceral organs of rice field frogs, and the severity of lesions is tentatively related to levels of parasitemia.

Pathological Study of Blood Parasites in Rice Field Frogs, Hoplobatrachus rugulosus (Wiegmann, 1834)

Science.gov (United States)

Sailasuta, Achariya; Satetasit, Jetjun; Chutmongkonkul, Malinee

2011-01-01

One hundred and forty adult rice field frogs, Hoplobatrachus rugulosus (Wiegmann, 1834), were collected in Srakaew province, Thailand. For blood parasite examination, thin blood smears were made and routinely stained with Giemsa. The results showed that 70% of the frogs (98/140) were infected with 5 species of blood parasites, including a Trypanosoma rotatorium-like organism, Trypanosoma chattoni, Hepatozoon sp. a, Hepatozoon sp. b, and Lankesterella minima. Pathological examination of the liver, lung, spleen, and kidney of the frogs that were apparently infected with one of these blood parasites were collected and processed by routine histology and subsequently stained with haematoxylin and eosin. Histopathological findings associated with the Trypanosoma rotatorium-like organism and Trypanosoma chattoni-infected frogs showed no pathological lesions. Hepatozoon sp. a and Hepatozoon sp. b-infected frogs developed inflammatory lesions predominantly in the liver, demonstrating granuloma-like lesions with Hepatozoon sp. meronts at the centre. Tissue sections of Lankesterella minima-infected frogs also showed lesions. Liver and spleen showed inflammatory lesions with an accumulation of melanomacrophage centres (MMCs) surrounding the meronts and merozoites. It is suggested that Hepatozoon sp. a, Hepatozoon sp. b, and Lankesterella minima-infections are capable of producing inflammatory lesions in the visceral organs of rice field frogs, and the severity of lesions is tentatively related to levels of parasitemia. PMID:21918731

Sophisticated Communication in the Brazilian Torrent Frog Hylodes japi.

Science.gov (United States)

de Sá, Fábio P; Zina, Juliana; Haddad, Célio F B

2016-01-01

Intraspecific communication in frogs plays an important role in the recognition of conspecifics in general and of potential rivals or mates in particular and therefore with relevant consequences for pre-zygotic reproductive isolation. We investigate intraspecific communication in Hylodes japi, an endemic Brazilian torrent frog with territorial males and an elaborate courtship behavior. We describe its repertoire of acoustic signals as well as one of the most complex repertoires of visual displays known in anurans, including five new visual displays. Previously unknown in frogs, we also describe a bimodal inter-sexual communication system where the female stimulates the male to emit a courtship call. As another novelty for frogs, we show that in addition to choosing which limb to signal with, males choose which of their two vocal sacs will be used for visual signaling. We explain how and why this is accomplished. Control of inflation also provides additional evidence that vocal sac movement and color must be important for visual communication, even while producing sound. Through the current knowledge on visual signaling in Neotropical torrent frogs (i.e. hylodids), we discuss and highlight the behavioral diversity in the family Hylodidae. Our findings indicate that communication in species of Hylodes is undoubtedly more sophisticated than we expected and that visual communication in anurans is more widespread than previously thought. This is especially true in tropical regions, most likely due to the higher number of species and phylogenetic groups and/or to ecological factors, such as higher microhabitat diversity.

Sophisticated Communication in the Brazilian Torrent Frog Hylodes japi.

Directory of Open Access Journals (Sweden)

Fábio P de Sá

Full Text Available Intraspecific communication in frogs plays an important role in the recognition of conspecifics in general and of potential rivals or mates in particular and therefore with relevant consequences for pre-zygotic reproductive isolation. We investigate intraspecific communication in Hylodes japi, an endemic Brazilian torrent frog with territorial males and an elaborate courtship behavior. We describe its repertoire of acoustic signals as well as one of the most complex repertoires of visual displays known in anurans, including five new visual displays. Previously unknown in frogs, we also describe a bimodal inter-sexual communication system where the female stimulates the male to emit a courtship call. As another novelty for frogs, we show that in addition to choosing which limb to signal with, males choose which of their two vocal sacs will be used for visual signaling. We explain how and why this is accomplished. Control of inflation also provides additional evidence that vocal sac movement and color must be important for visual communication, even while producing sound. Through the current knowledge on visual signaling in Neotropical torrent frogs (i.e. hylodids, we discuss and highlight the behavioral diversity in the family Hylodidae. Our findings indicate that communication in species of Hylodes is undoubtedly more sophisticated than we expected and that visual communication in anurans is more widespread than previously thought. This is especially true in tropical regions, most likely due to the higher number of species and phylogenetic groups and/or to ecological factors, such as higher microhabitat diversity.

THE MOCHE BOTANICAL FROG (La rana botánica mochica

Directory of Open Access Journals (Sweden)

Donna McClelland †

2011-06-01

Full Text Available Plants and animals with features which identify them as supernaturals characterize the art of the Precolumbian Moche culture of northern Peru. Among these animals is a frog with feline attributes and a consistent association with manioc tubers, stalks, and plants, the Botanical Frog. The Botanical Frog appears to have been patterned on Leptodactylus pentadactylus. It is shown copulating with felines. Fine line painted vessels and ones with low relief decoration show the Botanical Frog performing as part of a ritual involving other animals and cultivated crops, suggesting that the Botanical Frog was associated with agriculture. ESPAÑOL: El arte de la cultura mochica de la costa norte del Perú presenta plantas y animales mostrando rasgos sobrenaturales. Uno de los animales es una rana con elementos felinos y asociada con tubérculos, ramas y plantas de yuca. La Rana Botánica probablemente tiene su origen en Leptodactylus pentadactylus, una rana carnívora de la selva amazónica. La Rana Botánica copula con felinos y, en vasijas pintadas con líneas finas o con escenarios representados en bajorrelieve, toma parte en ceremonias involucrando a otros animales y cosechas domésticas. Parece ser que la Rana Botánica era un ser sobrenatural asociado con la agricultura.

Field guide to malformations of frogs and toads: with radiographic interpretations

Science.gov (United States)

Meteyer, Carol U.

2000-01-01

In 1995, students found numerous malformed frogs on a field trip to a Minnesota pond. Since that time, reports of malformed frogs have increased dramatically. Malformed frogs have now been reported in 44 states in 38 species of frogs, and 19 species of toads. Estimates as high as 60% of the newly metamorphosed frog populations have had malformations at some ponds (NARCAM, ’99). The wide geographic distribution of malformed frogs and the variety of malformations are a concern to resource managers, research scientists and public health officials. The potential for malformations to serve as a signal of ecosystem disruption, and the affect this potential disruption might have on other organisms that share those ecosystems, has not been resolved. Malformations represent an error that occurred early in development. The event that caused the developmental error is temporally distant from the malformation we see in the fully developed animal. Knowledge of normal developmental principles is necessary to design thoughtful investigations that will define the events involved in abnormal development in wild frog populations.Development begins at the time an egg is fertilized and progresses by chemical communication between cells and cell layers. This communication is programmed through gene expression. Malformations represent primary errors in development, errors in chemical communication or translation of genetic information. Deformations arise later in development and usually result from the influence of mechanical factors (such as amputation) that alter shape or anatomy of a structure that has developed normally. The occurrence and the type of malformations are influenced by the type of error or insult as well as the timing of the error (the developmental stage at which the error occurred). The appearance of the malformation can therefore provide clues that suggest when the error may have occurred. If the malformation is an incomplete organ, such as an incomplete limb, the

Impacts of Intensified Agriculture Developments on Marsh Wetlands

Directory of Open Access Journals (Sweden)

Zhaoqing Luan

2013-01-01

Full Text Available A spatiotemporal analysis on the changes in the marsh landscape in the Honghe National Nature Reserve, a Ramsar reserve, and the surrounding farms in the core area of the Sanjiang Plain during the past 30 years was conducted by integrating field survey work with remote sensing techniques. The results indicated that intensified agricultural development had transformed a unique natural marsh landscape into an agricultural landscape during the past 30 years. Ninety percent of the natural marsh wetlands have been lost, and the areas of the other natural landscapes have decreased very rapidly. Most dry farmland had been replaced by paddy fields during the progressive change of the natural landscape to a farm landscape. Attempts of current Chinese institutions in preserving natural wetlands have achieved limited success. Few marsh wetlands have remained healthy, even after the establishment of the nature reserve. Their ecological qualities have been declining in response to the increasing threats to the remaining wetland habitats. Irrigation projects play a key role in such threats. Therefore, the sustainability of the natural wetland ecosystems is being threatened by increased regional agricultural development which reduced the number of wetland ecotypes and damaged the ecological quality.

Using a Phototransduction System to Monitor the Isolated Frog Heart

Science.gov (United States)

Stephens, Philip J.

2015-01-01

A simple and inexpensive method of monitoring the movement of an isolated frog heart provides comparable results to those obtained with a force transducer. A commercially available photoresistor is integrated into a Wheatstone bridge circuit, and the output signal is interfaced directly with a recording device. An excised, beating frog heart is…

Searching for the Source of Salt Marsh Buried Mercury.

Science.gov (United States)

Brooke, C. G.; Nelson, D. C.; Fleming, E. J.

2016-12-01

Salt marshes provide a barrier between upstream mercury contamination and coastal ecosystems. Mercury is sorbed, transported, and deposited in estuarine systems. Once the upstream mercury source has been remediated, the downstream mercury contaminated salt marsh sediments should become "capped" or buried by uncontaminated sediments preventing further ecosystem contamination. Downstream from a remediated mercury mine, an estuarine intertidal marsh in Tomales Bay, CA, USA, scavengers/predators (e.g. Pachygrapsus crassipes, Lined Shore Crab) have leg mercury concentrations as high as 5.5 ppm (dry wt./dry wt.), which increase significantly with crab size, a surrogate for trophic level. These elevated mercury concentrations suggests that "buried" mercury is rereleased into the environment. To locate possible sources of mercury release in Walker Marsh, we sampled a transect across the marsh that included diverse micro-environments (e.g. rhizoshere, stratified sediments, faunal burrows). From each location we determined the sediment structure, sediment color, total sediment mercury, total sediment iron, and microbial composition (n = 28). Where flora or fauna had perturbed the sediment, mercury concentrations were 10% less than undisturbed stratified sediments (1025 ppb vs. 1164 ppb, respectively). High-throughput SSU rRNA gene sequencing and subsequent co-occurrence network analysis genera indicated that in flora- or fauna- perturbed sediments there was an increased likelihood that microbial genera contained mercury mobilizing genes (94% vs 57%; in perturbed vs stratified sediments, respectively). Our observations are consistent with findings by others that in perturbed sites mercury mobility increased. We did however identify a microbial and geochemical profile with increased mercury mobility. For future work we plan to quantify the role these micro-environments have on mercury-efflux from salt marshes.

The Rhizosphere Zone: A Hot Spot of Microbial Activity and Methylmercury Production in Saltmarsh Sediments of San Francisco Bay, California

Science.gov (United States)

Windham-Myers, L.; Marvin-Dipasquale, M.; Voytek, M.; Kirshtein, J.; Krabbenhoft, D. P.; Agee, J. L.; Cox, M.; Kakouros, E.; Collins, J. N.; Yee, D.

2008-12-01

-reducing bacterial DNA in vegetated sites. In contrast to microbial indicators of mercury methylation, no effects of devegetation or seasonal sampling were observed on sediment pools of reactive Hg (Hg(II)R), although the relative abundance of mercuric reductase functional genes (MerA) was reduced by devegetation and was correlated with live root density. These experiments, among others, demonstrate that the presence and activity of emergent wetland plants directly influence Hg cycling in densely rooted surface soils. Development of this shallow and dense rhizosphere is likely to be a primary reason as to why periodically flooded, high elevation marsh sites are a "hot spot" for mercury methylation.

Elevation dynamics in a restored versus a submerging salt marsh in Long Island Sound

Science.gov (United States)

Anisfeld, Shimon C.; Hill, Troy D.; Cahoon, Donald R.

2016-01-01

Accelerated sea-level rise (SLR) poses the threat of salt marsh submergence, especially in marshes that are relatively low-lying. At the same time, restoration efforts are producing new low-lying marshes, many of which are thriving and avoiding submergence. To understand the causes of these different fates, we studied two Long Island Sound marshes: one that is experiencing submergence and mudflat expansion, and one that is undergoing successful restoration. We examined sedimentation using a variety of methods, each of which captures different time periods and different aspects of marsh elevation change: surface-elevation tables, marker horizons, sediment cores, and sediment traps. We also studied marsh hydrology, productivity, respiration, nutrient content, and suspended sediment. We found that, despite the expansion of mudflat in the submerging marsh, the areas that remain vegetated have been gaining elevation at roughly the rate of SLR over the last 10 years. However, this elevation gain was only possible thanks to an increase in belowground volume, which may be a temporary response to waterlogging. In addition, accretion rates in the first half of the twentieth century were much lower than current rates, so century-scale accretion in the submerging marsh was lower than SLR. In contrast, at the restored marsh, accretion rates are now averaging about 10 mm yr−1 (several times the rate of SLR), much higher than before restoration. The main cause of the different trajectories at the two marshes appeared to be the availability of suspended sediment, which was much higher in the restored marsh. We considered and rejected alternative hypotheses, including differences in tidal flooding, plant productivity, and nutrient loading. In the submerging marsh, suspended and deposited sediment had relatively high organic content, which may be a useful indicator of sediment starvation.

The island rule in the Brazilian frog Phyllodytes luteolus (Anura: Hylidae: incipient gigantism?

Directory of Open Access Journals (Sweden)

Marcio Mageski

2015-10-01

Full Text Available ABSTRACT The island rule suggests that, when mainland animals are isolated on islands, large animals tend to become smaller, while small animals tend to become larger. A small frog in eastern Brazil, Phyllodytes luteolus (Wied-Neuwied, 1824, is widely distributed in association with bromeliads. At the end of the last glaciation, parts of the mainland became islands due to rising sea levels, thereby isolating frog populations on these islands. If the island rule holds, we predicted that frogs on islands would tend to be larger than frogs on the mainland. We compared sizes (weight and length of 30 randomly selected male frogs from the mainland with 30 from an island in the state of Espírito Santo, Brazil. We also sampled population density on the island and mainland because concurrent with changing sizes, depending on the causal relationship, density may also change. As predicted, island frogs tended to be larger (both in snout-vent length and weight and were much more abundant. While not specifically addressed in this study, the absence of predators and interspecific competitors may explain both of these trends.

Numerical modeling of salt marsh morphological change induced by Hurricane Sandy

Science.gov (United States)

Hu, Kelin; Chen, Qin; Wang, Hongqing; Hartig, Ellen K.; Orton, Philip M.

2018-01-01

The salt marshes of Jamaica Bay serve as a recreational outlet for New York City residents, mitigate wave impacts during coastal storms, and provide habitat for critical wildlife species. Hurricanes have been recognized as one of the critical drivers of coastal wetland morphology due to their effects on hydrodynamics and sediment transport, deposition, and erosion processes. In this study, the Delft3D modeling suite was utilized to examine the effects of Hurricane Sandy (2012) on salt marsh morphology in Jamaica Bay. Observed marsh elevation change and accretion from rod Surface Elevation Tables and feldspar Marker Horizons (SET-MH) and hydrodynamic measurements during Hurricane Sandy were used to calibrate and validate the wind-waves-surge-sediment transport-morphology coupled model. The model results agreed well with in situ field measurements. The validated model was then used to detect salt marsh morphological change due to Sandy across Jamaica Bay. Model results indicate that the island-wide morphological changes in the bay's salt marshes due to Sandy were in the range of −30 mm (erosion) to +15 mm (deposition), and spatially complex and heterogeneous. The storm generated paired deposition and erosion patches at local scales. Salt marshes inside the west section of the bay showed erosion overall while marshes inside the east section showed deposition from Sandy. The net sediment amount that Sandy brought into the bay is only about 1% of the total amount of reworked sediment within the bay during the storm. Numerical experiments show that waves and vegetation played a critical role in sediment transport and associated wetland morphological change in Jamaica Bay. Furthermore, without the protection of vegetation, the marsh islands of Jamaica Bay would experience both more erosion and less accretion in coastal storms.

Elders Point East Marsh Island Restoration Monitoring Data Analysis

Science.gov (United States)

2017-09-21

accounting for more than 90% of the measured biomass on average, indicative of a well-established marsh (Figure 12). For Elders East the data indicated...61 3.3 Other Biological and Physical Measures ...Figure 9. Growth measurements at Elders East and JoCo Marsh. ....................................................... 20 Figure 10. Stem survival at

Sexual differences in prevalence of a new species of trypanosome infecting túngara frogs.

Science.gov (United States)

Bernal, Ximena E; Pinto, C Miguel

2016-04-01

Trypanosomes are a diverse group of protozoan parasites of vertebrates transmitted by a variety of hematophagous invertebrate vectors. Anuran trypanosomes and their vectors have received relatively little attention even though these parasites have been reported from frog and toad species worldwide. Blood samples collected from túngara frogs (Engystomops pustulosus), a Neotropical anuran species heavily preyed upon by eavesdropping frog-biting midges (Corethrella spp.), were examined for trypanosomes. Our results revealed sexual differences in trypanosome prevalence with female frogs being rarely infected (frog-biting midges that find their host using the mating calls produced by male frogs. Following previous anuran trypanosome studies, we examined 18S ribosomal RNA gene to characterize and establish the phylogenetic relationship of the trypanosome species found in túngara frogs. A new species of giant trypanosome, Trypanosoma tungarae n. sp., is described in this study. Overall the morphometric data revealed that the trypomastigotes of T. tungarae n. sp. are similar to other giant trypanosomes such as Trypanosoma rotatorium and Trypanosoma ranarum. Despite its slender and long cell shape, however, 18S rRNA gene sequences revealed that T. tungarae n. sp. is sister to the rounded-bodied giant trypanosome, Trypanosoma chattoni. Therefore, morphological convergence explains similar morphology among members of two non-closely related groups of trypanosomes infecting frogs. The results from this study underscore the value of coupling morphological identification with molecular characterization of anuran trypanosomes.

Assessment of frog meat utilisation in Ibadan, Oyo state, Nigeria ...

African Journals Online (AJOL)

Frogs are among the most threatened species of wildlife in IUCN red list. Its utilisation in Ibadan, a major depot in western Nigeria was therefore conducted with the aim of assessing the forms and trend of use; and amongst others, reasons for frog meat consumption. Data for the study were collected through questionnaire, ...

High Spatial resolution remote sensing for salt marsh change detection on Fire Island National Seashore

Science.gov (United States)

Campbell, A.; Wang, Y.

2017-12-01

Salt marshes are under increasing pressure due to anthropogenic stressors including sea level rise, nutrient enrichment, herbivory and disturbances. Salt marsh losses risk the important ecosystem services they provide including biodiversity, water filtration, wave attenuation, and carbon sequestration. This study determines salt marsh change on Fire Island National Seashore, a barrier island along the south shore of Long Island, New York. Object-based image analysis was used to classifying Worldview-2, high resolution satellite, and topobathymetric LiDAR. The site was impacted by Hurricane Sandy in October of 2012 causing a breach in the Barrier Island and extensive overwash. In situ training data from vegetation plots were used to train the Random Forest classifier. The object-based Worldview-2 classification achieved an overall classification accuracy of 92.75. Salt marsh change for the study site was determined by comparing the 2015 classification with a 1997 classification. The study found a shift from high marsh to low marsh and a reduction in Phragmites on Fire Island. Vegetation losses were observed along the edge of the marsh and in the marsh interior. The analysis agreed with many of the trends found throughout the region including the reduction of high marsh and decline of salt marsh. The reduction in Phragmites could be due to the species shrinking niche between rising seas and dune vegetation on barrier islands. The complex management issues facing salt marsh across the United States including sea level rise and eutrophication necessitate very high resolution classification and change detection of salt marsh to inform management decisions such as restoration, salt marsh migration, and nutrient inputs.

Wave attenuation across a tidal marsh in San Francisco Bay

Science.gov (United States)

Foster-Martinez, Madeline R.; Lacy, Jessica; Ferner, Matthew C.; Variano, Evan A.

2018-01-01

Wave attenuation is a central process in the mechanics of a healthy salt marsh. Understanding how wave attenuation varies with vegetation and hydrodynamic conditions informs models of other marsh processes that are a function of wave energy (e.g. sediment transport) and allows for the incorporation of marshes into coastal protection plans. Here, we examine the evolution of wave height across a tidal salt marsh in San Francisco Bay. Instruments were deployed along a cross-shore transect, starting on the mudflat and crossing through zones dominated by Spartina foliosa and Salicornia pacifica. This dataset is the first to quantify wave attenuation for these vegetation species, which are abundant in the intertidal zone of California estuaries. Measurements were collected in the summer and winter to assess seasonal variation in wave attenuation. Calculated drag coefficients of S. foliosa and S. pacifica were similar, indicating equal amounts of vegetation would lead to similar energy dissipation; however, S. pacifica has much greater biomass close to the bed (<20 cm) and retains biomass throughout the year, and therefore, it causes more total attenuation. S. foliosa dies back in the winter, and waves often grow across this section of the marsh. For both vegetation types, attenuation was greatest for low water depths, when the vegetation was emergent. For both seasons, attenuation rates across S. pacifica were the highest and were greater than published attenuation rates across similar (Spartina alterniflora) salt marshes for the comparable depths. These results can inform designs for marsh restorations and management plans in San Francisco Bay and other estuaries containing these species.

Marsh Soil Responses to Nutrients: Belowground Structural and Organic Properties.

Science.gov (United States)

Coastal marsh responses to nutrient enrichment apparently depend upon soil matrix and whether the system is primarily biogenic or minerogenic. Deteriorating organic rich marshes (Jamaica Bay, NY) receiving wastewater effluent had lower belowground biomass, organic matter, and soi...

Environmental assessment of Al-Hammar Marsh, Southern Iraq

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Hind Fadhil Abdullah Al-Gburi

2017-02-01

Discussion and conclusions: Decreasing of Tigris and Euphrates discharges during the past decades due to drought conditions and upstream damming, as well as the increasing stress of wastewater effluents from anthropogenic activities, led to degradation of the downstream Al-Hammar Marsh water quality in terms of physical, chemical, and biological properties. As such properties were found to consistently exceed the historical and global quality objectives. However, element concentration decreasing trend at the marsh outlet station compared to other stations indicate that the marsh plays an important role as a natural filtration and bioremediation system. Higher element concentrations in winter were due to runoff from the washing of the surrounding Sabkha during flooding by winter rainstorms. Finally, the high concentrations of heavy metals in fish samples can be attributed to bioaccumulation and biomagnification processes.

The redesigned Forensic Research/Reference on Genetics-knowledge base, FROG-kb.

Science.gov (United States)

Kidd, Kenneth K; Soundararajan, Usha; Rajeevan, Haseena; Pakstis, Andrew J; Moore, Katherine N; Ropero-Miller, Jeri D

2018-03-01

The Forensic Resource/Reference on Genetics-knowledge base (FROG-kb) web site was introduced in 2011 and in the five years since the previous publication ongoing research into how the database can better serve forensics has resulted in extensive redesign of the database interface and functionality. Originally designed as a prototype to support forensic use of single nucleotide polymorphisms (SNPs), FROG-kb provides a freely accessible web interface that facilitates forensic practice and can be useful for teaching and research. Based on knowledge gained through its use, the web interface has been redesigned for easier navigation through the multiple components. The site also has functional enhancements, extensive new documentation, and new reference panels of SNPs with new curated data. FROG-kb focuses on single nucleotide polymorphisms (SNPs) and provides reference population data for several published panels of individual identification SNPs (IISNPs) and several published panels of ancestry inference SNPs (AISNPs). For each of the various marker panels with reference population data, FROG-kb calculates random match probabilities (RMP) and relative likelihoods of ancestry for a user-entered genotype profile (either completely or partially specified). Example genotype profiles are available and the User's Manual presents interpretation guidelines for the calculations. The extensive documentation along with ongoing updates makes FROG-kb a comprehensive tool in facilitating use of SNPs in forensic practice and education. An overview of the new FROG-kb with examples and material explaining the results of its use are presented here. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Gross nitrous oxide production drives net nitrous oxide fluxes across a salt marsh landscape.

Science.gov (United States)

Yang, Wendy H; Silver, Whendee L

2016-06-01

Sea level rise will change inundation regimes in salt marshes, altering redox dynamics that control nitrification - a potential source of the potent greenhouse gas, nitrous oxide (N2 O) - and denitrification, a major nitrogen (N) loss pathway in coastal ecosystems and both a source and sink of N2 O. Measurements of net N2 O fluxes alone yield little insight into the different effects of redox conditions on N2 O production and consumption. We used in situ measurements of gross N2 O fluxes across a salt marsh elevation gradient to determine how soil N2 O emissions in coastal ecosystems may respond to future sea level rise. Soil redox declined as marsh elevation decreased, with lower soil nitrate and higher ferrous iron in the low marsh compared to the mid and high marshes (P production was highest in the low marsh and lowest in the mid-marsh (P = 0.02), whereas gross N2 O consumption did not differ among marsh zones. Thus, variability in gross N2 O production rates drove the differences in net N2 O flux among marsh zones. Our results suggest that future studies should focus on elucidating controls on the processes producing, rather than consuming, N2 O in salt marshes to improve our predictions of changes in net N2 O fluxes caused by future sea level rise. © 2015 John Wiley & Sons Ltd.

Ammonium transformation in a nitrogen-rich tidal freshwater marsh

DEFF Research Database (Denmark)

Gribsholt, B.; Andersson, M.; Boschker, H.T.S.

2006-01-01

The fate and transport of watershed-derived ammonium in a tidal freshwater marsh fringing the nutrient rich Scheldt River, Belgium, was quantified in a whole ecosystem 15N labeling experiment. In late summer (September) we added 15N-NH4+ to the flood water entering a 3477 m2 tidal freshwater marsh...

Propulsive force calculations in swimming frogs I. A momentum-impulse approach

NARCIS (Netherlands)

Nauwelaerts, S; Stamhuis, EJ; Aerts, P

Frogs are animals that are capable of locomotion in two physically different media, aquatic and terrestrial. A comparison of the kinematics of swimming frogs in a previous study revealed a difference in propulsive impulse between jumping and swimming. To explore this difference further, we

Chemical camouflage--a frog's strategy to co-exist with aggressive ants.

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Mark-Oliver Rödel

Full Text Available Whereas interspecific associations receive considerable attention in evolutionary, behavioural and ecological literature, the proximate bases for these associations are usually unknown. This in particular applies to associations between vertebrates with invertebrates. The West-African savanna frog Phrynomantis microps lives in the underground nest of ponerine ants (Paltothyreus tarsatus. The ants usually react highly aggressively when disturbed by fiercely stinging, but the frog is not attacked and lives unharmed among the ants. Herein we examined the proximate mechanisms for this unusual association. Experiments with termites and mealworms covered with the skin secretion of the frog revealed that specific chemical compounds seem to prevent the ants from stinging. By HPLC-fractionation of an aqueous solution of the frogs' skin secretion, two peptides of 1,029 and 1,143 Da were isolated and found to inhibit the aggressive behaviour of the ants. By de novo sequencing using tandem mass spectrometry, the amino acid sequence of both peptides consisting of a chain of 9 and 11 residues, respectively, was elucidated. Both peptides were synthesized and tested, and exhibited the same inhibitory properties as the original frog secretions. These novel peptides most likely act as an appeasement allomone and may serve as models for taming insect aggression.

Guinea Worm in a Frog

Centers for Disease Control (CDC) Podcasts

2017-03-09

Dr. Mark Eberhard, a retired parasitologist and CDC guest researcher, discusses Guinea worm infection in a wild-caught frog.  Created: 3/9/2017 by National Center for Emerging and Zoonotic Infectious Diseases (NCEZID).   Date Released: 3/9/2017.

Frankixalus, a New Rhacophorid Genus of Tree Hole Breeding Frogs with Oophagous Tadpoles.

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S D Biju

Full Text Available Despite renewed interest in the biogeography and evolutionary history of Old World tree frogs (Rhacophoridae, this family still includes enigmatic frogs with ambiguous phylogenetic placement. During fieldwork in four northeastern states of India, we discovered several populations of tree hole breeding frogs with oophagous tadpoles. We used molecular data, consisting of two nuclear and three mitochondrial gene fragments for all known rhacophorid genera, to investigate the phylogenetic position of these new frogs. Our analyses identify a previously overlooked, yet distinct evolutionary lineage of frogs that warrants recognition as a new genus and is here described as Frankixalus gen. nov. This genus, which contains the enigmatic 'Polypedates' jerdonii described by Günther in 1876, forms the sister group of a clade containing Kurixalus, Pseudophilautus, Raorchestes, Mercurana and Beddomixalus. The distinctiveness of this evolutionary lineage is also corroborated by the external morphology of adults and tadpoles, adult osteology, breeding ecology, and life history features.

Louisiana Marsh Management Plan 1995

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — We sampled experimental research areas in the Barataria Basin of Louisiana during March and May, 1995, to examine the effects of structural marsh management on...

Plathelminth abundance in North Sea salt marshes: environmental instability causes high diversity

Science.gov (United States)

Armonies, Werner

1986-09-01

Although supralittoral salt marshes are habitats of high environmental instability, the meiofauna is rich in species and abundance is high. The community structure of free-living Plathelminthes (Turbellaria) in these salt marshes is described. On an average, 104 individuals are found below an area of 10 cm2. The average species density in ungrazed salt marshes is 11.3 below 10 cm2 and 45.2 below 100 cm2, indicating strong small-scale heterogenity. The faunal similarity between sediment and the corresponding above-ground vegetation is higher than between adjacent sample sites. Species prefer distinct ranges of salinity. In the lower part of the supralittoral salt marshes, the annual fluctuations of salinity are strongest and highly unpredictable. This region is richest in plathelminth species and abundance; diversity is highest, and the faunal composition of parallel samples is quite similar. In the upper part of the supralittoral salt marshes, the annual variability of salinity is lower, plathelminths are poor in species diversity and abundance. Parallel samples often have no species in common. Thus, those salt marsh regions with the most unstable environment are inhabited by the most diverse species assemblage. Compared to other littoral zones of the North Sea, however, plathelminth diversity in salt marshes is low. The observed plathelminth diversity pattern can apparently be explained by the “dynamic equilibrium model” (Huston, 1979).

Stratigraphic response of salt marshes to slow rates of sea-level change

Science.gov (United States)

Daly, J.; Bell, T.

2006-12-01

Conventional models of salt-marsh development show an idealized spatial relationship between salt-marsh floral and foraminiferal zones, where the landward margin of the marsh gradually migrates inland in response to sea-level rise. This model predicts that transgression will result in persistent and possibly expanded salt marshes at the surface, depending on a variety of factors including sediment supply, hydrologic conditions, tidal range, and rate of sea-level rise. However, in areas with abundant sediment supply and slow rates of sea- level rise, the extent of back-barrier salt marshes may decline over time as the barrier-spits mature. Sea level around the northeast coast of Newfoundland is rising at a very slow rate during the late Holocene (flora. These transitions are interpreted to reflect the progradation of the spit, decreased tidal exchange in the back-barrier, and increased influence of freshwater streams discharging into the back-barrier setting. Decreased marine influence on the back-barrier environment leads to a floral and faunal shift associated with a regressive stratigraphy in an area experiencing sea-level rise. For studies of Holocene sea-level change requiring salt-marsh stratigraphic records, it is necessary to account for changing micro-environments to locate sites appropriate for study; salt marshes may play an important role in defining the record, but may not exist at the surface to guide investigation.

Sequestered Alkaloid Defenses in the Dendrobatid Poison Frog Oophaga pumilio Provide Variable Protection from Microbial Pathogens.

Science.gov (United States)

Hovey, Kyle J; Seiter, Emily M; Johnson, Erin E; Saporito, Ralph A

2018-03-01

Most amphibians produce their own defensive chemicals; however, poison frogs sequester their alkaloid-based defenses from dietary arthropods. Alkaloids function as a defense against predators, and certain types appear to inhibit microbial growth. Alkaloid defenses vary considerably among populations of poison frogs, reflecting geographic differences in availability of dietary arthropods. Consequently, environmentally driven differences in frog defenses may have significant implications regarding their protection against pathogens. While natural alkaloid mixtures in dendrobatid poison frogs have recently been shown to inhibit growth of non-pathogenic microbes, no studies have examined the effectiveness of alkaloids against microbes that infect these frogs. Herein, we examined how alkaloid defenses in the dendrobatid poison frog, Oophaga pumilio, affect growth of the known anuran pathogens Aeromonas hydrophila and Klebsiella pneumoniae. Frogs were collected from five locations throughout Costa Rica that are known to vary in their alkaloid profiles. Alkaloids were isolated from individual skins, and extracts were assayed against both pathogens. Microbe subcultures were inoculated with extracted alkaloids to create dose-response curves. Subsequent spectrophotometry and cell counting assays were used to assess growth inhibition. GC-MS was used to characterize and quantify alkaloids in frog extracts, and our results suggest that variation in alkaloid defenses lead to differences in inhibition of these pathogens. The present study provides the first evidence that alkaloid variation in a dendrobatid poison frog is associated with differences in inhibition of anuran pathogens, and offers further support that alkaloid defenses in poison frogs confer protection against both pathogens and predators.

BIOMETRIC STUDY TO RANA RIDIBUNDA FROG SPECIES NEARNESS TO TIMISOARA LOCALITY

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M. BURA

2007-10-01

Full Text Available Speciality literature provides little informations regarding Rana ridibunda frogbiometry. For supply this gap we studied the size and weight of 54 frogs sampled fromnearby Timişoara area ponds.The mean body lenght was 8,08 ± 0,54 cm for the females and respectively 6,17 ± 0,45cm for the males. Before evisceration on a par females weighted 62,28 ± 12,87 g andthe males 22,46 ± 5,3 g whereas after this action the carcase weighted 43,89 ± 8,91 gin the case of females and respectively 18,45 ± 4,42 g in the case of male lake frog. Themean leg lenght measured 12,59 ± 0,68 cm for female frogs and 9,78 ± 0,66 cm in thecase of male frogs. The hind stylopodium was estimated on a par as 13,23 ± 2,57 g forfemales and 5,33 ± 1,26 g for the males.

Sexual differences in prevalence of a new species of trypanosome infecting túngara frogs

Directory of Open Access Journals (Sweden)

Ximena E. Bernal

2016-04-01

Full Text Available Trypanosomes are a diverse group of protozoan parasites of vertebrates transmitted by a variety of hematophagous invertebrate vectors. Anuran trypanosomes and their vectors have received relatively little attention even though these parasites have been reported from frog and toad species worldwide. Blood samples collected from túngara frogs (Engystomops pustulosus, a Neotropical anuran species heavily preyed upon by eavesdropping frog-biting midges (Corethrella spp., were examined for trypanosomes. Our results revealed sexual differences in trypanosome prevalence with female frogs being rarely infected (<1%. This finding suggests this protozoan parasite may be transmitted by frog-biting midges that find their host using the mating calls produced by male frogs. Following previous anuran trypanosome studies, we examined 18S ribosomal RNA gene to characterize and establish the phylogenetic relationship of the trypanosome species found in túngara frogs. A new species of giant trypanosome, Trypanosoma tungarae n. sp., is described in this study. Overall the morphometric data revealed that the trypomastigotes of T. tungarae n. sp. are similar to other giant trypanosomes such as Trypanosoma rotatorium and Trypanosoma ranarum. Despite its slender and long cell shape, however, 18S rRNA gene sequences revealed that T. tungarae n. sp. is sister to the rounded-bodied giant trypanosome, Trypanosoma chattoni. Therefore, morphological convergence explains similar morphology among members of two non-closely related groups of trypanosomes infecting frogs. The results from this study underscore the value of coupling morphological identification with molecular characterization of anuran trypanosomes.

Salt Marsh Bacterial Communities before and after the Deepwater Horizon Oil Spill.

Science.gov (United States)

Engel, Annette Summers; Liu, Chang; Paterson, Audrey T; Anderson, Laurie C; Turner, R Eugene; Overton, Edward B

2017-10-15

Coastal salt marshes along the northern Gulf of Mexico shoreline received varied types and amounts of weathered oil residues after the 2010 Deepwater Horizon oil spill. At the time, predicting how marsh bacterial communities would respond and/or recover to oiling and other environmental stressors was difficult because baseline information on community composition and dynamics was generally unavailable. Here, we evaluated marsh vegetation, physicochemistry, flooding frequency, hydrocarbon chemistry, and subtidal sediment bacterial communities from 16S rRNA gene surveys at 11 sites in southern Louisiana before the oil spill and resampled the same marshes three to four times over 38 months after the spill. Calculated hydrocarbon biomarker indices indicated that oil replaced native natural organic matter (NOM) originating from Spartina alterniflora and marine phytoplankton in the marshes between May 2010 and September 2010. At all the studied marshes, the major class- and order-level shifts among the phyla Proteobacteria , Firmicutes , Bacteroidetes , and Actinobacteria occurred within these first 4 months, but another community shift occurred at the time of peak oiling in 2011. Two years later, hydrocarbon levels decreased and bacterial communities became more diverse, being dominated by Alphaproteobacteria ( Rhizobiales ), Chloroflexi ( Dehalococcoidia ), and Planctomycetes Compositional changes through time could be explained by NOM source differences, perhaps due to vegetation changes, as well as marsh flooding and salinity excursions linked to freshwater diversions. These findings indicate that persistent hydrocarbon exposure alone did not explain long-term community shifts. IMPORTANCE Significant deterioration of coastal salt marshes in Louisiana has been linked to natural and anthropogenic stressors that can adversely affect how ecosystems function. Although microorganisms carry out and regulate most biogeochemical reactions, the diversity of bacterial

Regulation of salt marsh mosquito populations by the 18.6-yr lunar-nodal cycle.

Science.gov (United States)

Rochlin, Ilia; Morris, James T

2017-08-01

The 18.6-yr lunar-nodal cycle drives changes in tidal amplitude globally, affecting coastal habitat formation, species and communities inhabiting rocky shores, and salt marsh vegetation. However, the cycle's influence on salt marsh fauna lacked sufficient long-term data for testing its effect. We circumvented this problem by using salt marsh mosquito records obtained over a period of over four decades in two estuaries in the northeastern USA. Salt marsh mosquito habitat is near the highest tide level where the impact of the nodal cycle on flood frequency is greatest. Wavelet spectral and cross-correlation analyses revealed periodicity in salt marsh mosquito abundance that was negatively correlated with tidal amplitude. Tidal amplitude was a significant predictor of salt marsh mosquito abundance with the cycle maxima coinciding with lower mosquito populations, possibly due to access by predatory fish. However, these effects were detected only at the location with extensive salt marsh habitat and astronomical tides and were weakened or lacked significance at the location with small microtidal salt marshes and wind-driven tides. Mosquitoes can serve as proxy indicators for numerous invertebrate species on the salt marsh. These predictable cycles and their effects need to be taken into consideration when investigating, restoring, or managing intertidal communities that are also facing sea-level rise. © 2017 by the Ecological Society of America.

Hematophagous insects as vectors for frog trypanosomes.

Science.gov (United States)

Ramos, B; Urdaneta-Morales, S

1977-12-01

Experimental infections of three hematophagous arthropods (Rhodnius prolixus, Aedes aegypti, and Culex pipiens) with a trypanosome of the Trypanosoma rotatorium complex found in the frogs Hyla crepitans and Leptodactylus insularum revealed that A. aegypti is a good host for the flagellate; the course of development in the intestinal tract of the mosquito is described from 15 minutes to 168 hours. C. pipiens showed only low intestinal infections and R. prolixus did not permit development of the parasite. It is postulated that, in addition to the transmission of T. rotatorium by leeches, batrachophilic mosquitoes may transmit the parasite to frogs of more terrestrial habits by being ingested by these anurans.

Impact of Dams on Riparian Frog Communities in the Southern Western Ghats, India

Directory of Open Access Journals (Sweden)

Rohit Naniwadekar

2014-08-01

Full Text Available The Western Ghats is a global biodiversity hotspot and home to diverse and unique assemblages of amphibians. Several rivers originate from these mountains and hydropower is being tapped from them. The impacts of hydrological regulation of riparian ecosystems to wildlife and its habitat are poorly documented, and in particular the fate of frog populations is unknown. We examined the effects of dams on riparian frog communities in the Thamirabarani catchment in southern Western Ghats. We used nocturnal visual encounter surveys constrained for time, to document the species richness of frogs below and above the dam, and also at control sites in the same catchment. While we did not find differences in species richness below and above the dams, the frog community composition was significantly altered as a likely consequence of altered flow regime. The frog species compositions in control sites were similar to above-dam sites. Below-dam sites had a distinctly different species composition. Select endemic frog species appeared to be adversely impacted due to the dams. Below-dam sites had a greater proportion of generalist and widely distributed species. Dams in the Western Ghats appeared to adversely impact population of endemic species, particularly those belonging to the genus Nyctibatrachus that shows specialization for intact streams.

Greenhouse gas emissions from a created brackish marsh in eastern North Carolina

Science.gov (United States)

Shiau, Yo-Jin; Burchell, Michael R.; Krauss, Ken W.; Birgand, François; Broome, Stephen W.

2016-01-01

Tidal marsh creation helps remediate global warming because tidal wetlands are especially proficient at sequestering carbon (C) in soils. However, greenhouse gas (GHG) losses can offset the climatic benefits gained from C storage depending on how these tidal marshes are constructed and managed. This study attempts to determine the GHG emissions from a 4–6 year old created brackish marsh, what environmental factors governed these emissions, and how the magnitude of the fluxes relates to other wetland ecosystems. The static flux chamber method was used to measure GHG fluxes across three distinct plant zones segregated by elevation. The major of soil GHG fluxes from the marsh were from CO2 (−48–192 mg C m-2 h-1), although it was near the lower end of values reported from other wetland types having lower salinities, and would mostly be offset by photosynthetic uptake in this created brackish marsh. Methane flux was also low (−0.33–0.86 mg C m-2 h-1), likely inhibited by the high soil SO42−and soil redox potentials poised above −150 mV in this in this created brackish marsh environment. Low N2O flux (−0.11–0.10 mg N m-2 h-1) was due to low soil NO3− and soil redox conditions favoring complete denitrification. GHG fluxes from this created brackish marsh were generally lower than those recorded from natural marshes, suggesting that C sequestration may not be offset by the radiative forcing from soil GHG emissions if projects are designed properly.

Aberrant femoral torsion presenting with frog-leg squatting mimicking gluteal muscle contracture.

Science.gov (United States)

Chiang, Chia-Ling; Tsai, Meng-Yuan; Chang, Wei-Ning; Chen, Clement Kuen-Huang

2012-04-01

Patients with frog-leg squatting have restricted internal rotation and adduction of the affected hips during sitting or squatting. In the surgical literature, the cause generally has been presumed to arise from and be pathognomonic for gluteal muscle contracture. However, we have encountered patients with frog-leg squatting but without gluteal muscle contracture. We therefore raised the following questions: What are the imaging features of patients with frog-leg squatting? Do conditions other than gluteal muscle contracture manifest frog-leg squatting? We retrospectively reviewed the MR images of 67 patients presenting with frog-leg squatting from April 1998 to July 2010. There were four females and 63 males; their mean age was 22.2 years (range, 4-50 years). During MRI readout, we observed aberrant axes of some femoral necks and obtained additional CT to measure femoral torsion angles in 59 of the 67 patients. MR images of 27 (40%) patients had signs of gluteal muscle contracture. Twenty-two (33%) patients (40 femora) had aberrant femoral torsion, including diminished anteversion (range, 6°-0°; average, 3.9°) in 11 femora of eight patients and femoral retroversion (range, muscle contracture or aberrant femoral torsion. The observation of aberrant femoral torsion was not anticipated before imaging studies. In addition to gluteal muscle contracture, aberrant femoral torsion can be a cause of frog-leg squatting. Level II, diagnostic study. See the guidelines for Authors for a complete description of levels of evidence.

Coastal marsh degradation: modeling the influence of vegetation die-off patterns on flow and sedimentation

Science.gov (United States)

Schepers, Lennert; Wang, Chen; Kirwan, Matthew; Belluco, Enrica; D'Alpaos, Andrea; Temmerman, Stijn

2014-05-01

Coastal marshes are vulnerable ecosystems that provide ecosystem functions such as storm protection and carbon sequestration. However, degradation of vegetated marshes into bare tidal flats or open water has been reported as a worldwide phenomenon, threatening their valuable wetland functions. Moreover, tidal marshes and bare flats are considered as alternative stable ecosystem states, which implies that, once vegetated marshes have degraded to bare flats, the (re)conversion from bare flats to marsh vegetation may be very difficult. Recent aerial photo analysis has demonstrated that the degradation or die-off of a marsh area is a spatial process, whereby vegetation is typically replaced by non-vegetated areas in the form of interior marsh pools, also known as ponds or marsh basins. On a small scale, these pools have similar characteristics among different marshes worldwide: pools that are located further away from tidal channels and with broad channel connections to the tidal channel system appear to have low surface elevations and a low probability for marsh recovery (this is re-establishment of vegetation on the surface). Interior pools located closer to, but that are not connected to channels on the other hand, are positioned on higher elevations and are more likely to recover. These findings may have important implications for the restoration potential of degraded marshes and their functions. We hypothesize that bio-geomorphologic interactions are the main mechanisms causing these differences in elevation and recovery potential of interior marsh pools: pools that are not connected to the channel system, are separated from the channel by vegetation, which reduces the flow velocity, increases sedimentation and may explain our observation of higher surface elevation of this type of pools. In contrast, pools that are connected with the channel system are not protected by vegetation and will experience higher flow velocities and lower sedimentation rates or even

Tritium kinetics in a freshwater marsh ecosystem

International Nuclear Information System (INIS)

Adams, L.W.

1976-01-01

Ten curies of tritium (as tritiated water, HTO) were applied to a 2-ha enclosed Lake Erie marsh in northwestern Ohio on 29 October 1973. Tritium kinetics in the marsh water, bottom sediment, and selected aquatic plants and animals were determined. Following HTO application, peak tritium levels in the sediment were observed on day 13 in the top 1-cm layer, on day 27 at the 5-cm depth, and on day 64 at the 10-cm depth. Peak levels at 15 and 20 cm were not discernible, although there was some movement of HTO to the 20-cm depth. A model based on diffusion theory described tritium movement through the sediment. Unbound and bound tritium levels in curly-leaf pondweed (Potamogeton crispus), pickerelweed (Pontederia cordata), and smartweed (Polygonum lapathifolium) generally tended to follow tritium levels in marsh water. The unbound tritium:marsh water tritium ratio was significantly larger (P < 0.001) in curly-leaf pondweed than in either of the two emergents. Tritium uptake into the unbound compartments of crayfish (Procambarus blandingi), carp (Cyprinus carpio), and bluegills (Lepomis macrochirus) was rapid. For crayfish, maximum HTO levels were observed on days 3 and 2 for viscera and muscle, respectively. Unbound HTO in carp viscera peaked on day 2, and levels in carp muscle reached a maximum in 4 hours. Maximum levels of unbound HTO in bluegill viscera and muscle were observed on day 1. After peak levels were obtained, unbound HTO paralleled marsh water HTO activity in all species. Tritium uptake into the bound compartments was not as rapid nor were the levels as high as for unbound HTO in any of the species. Peak bound levels in crayfish viscera were observed on day 20 and maximum levels in muscle were noted on day 10. Bound tritium in carp viscera and muscle reached maximum levels on day 20. In bluegills, peaks were reached on days 7 and 5 for viscera and muscle, respectively. Bound tritium in all species decreased following maximum levels

Bacterial flora on Cascades frogs in the Klamath Mountains of California

Science.gov (United States)

Karen Pope

2013-01-01

Amphibians are experiencing global declines due in part to the infectious disease chytridiomycosis. Some symbiotic bacteria residents on frog skin have been shown to inhibit the growth of Batrachochytrium dendrobatitis (Bd) but few studies have attempted to fully describe the resident bacterial flora of frog skin. We cultured and sequenced 130...

Two-photon excited autofluorescence imaging of freshly isolated frog retinas.

Science.gov (United States)

Lu, Rong-Wen; Li, Yi-Chao; Ye, Tong; Strang, Christianne; Keyser, Kent; Curcio, Christine A; Yao, Xin-Cheng

2011-06-01

The purpose of this study was to investigate cellular sources of autofluorescence signals in freshly isolated frog (Rana pipiens) retinas. Equipped with an ultrafast laser, a laser scanning two-photon excitation fluorescence microscope was employed for sub-cellular resolution examination of both sliced and flat-mounted retinas. Two-photon imaging of retinal slices revealed autofluorescence signals over multiple functional layers, including the photoreceptor layer (PRL), outer nuclear layer (ONL), outer plexiform layer (OPL), inner nuclear layer (INL), inner plexiform layer (IPL), and ganglion cell layer (GCL). Using flat-mounted retinas, depth-resolved imaging of individual retinal layers further confirmed multiple sources of autofluorescence signals. Cellular structures were clearly observed at the PRL, ONL, INL, and GCL. At the PRL, the autofluorescence was dominantly recorded from the intracellular compartment of the photoreceptors; while mixed intracellular and extracellular autofluorescence signals were observed at the ONL, INL, and GCL. High resolution autofluorescence imaging clearly revealed mosaic organization of rod and cone photoreceptors; and sub-cellular bright autofluorescence spots, which might relate to connecting cilium, was observed in the cone photoreceptors only. Moreover, single-cone and double-cone outer segments could be directly differentiated.

Salmonella Infection and Water Frogs

Centers for Disease Control (CDC) Podcasts

2010-01-12

This podcast, featuring lead investigator Shauna Mettee, discusses the first known outbreak of Salmonella in people due to contact with water frogs.  Created: 1/12/2010 by National Center for Zoonotic, Vector-Borne, and Enteric Diseases (NCZVED).   Date Released: 1/12/2010.

Natural disturbance reduces disease risk in endangered rainforest frog populations.

Science.gov (United States)

Roznik, Elizabeth A; Sapsford, Sarah J; Pike, David A; Schwarzkopf, Lin; Alford, Ross A

2015-08-21

Natural disturbances can drive disease dynamics in animal populations by altering the microclimates experienced by hosts and their pathogens. Many pathogens are highly sensitive to temperature and moisture, and therefore small changes in habitat structure can alter the microclimate in ways that increase or decrease infection prevalence and intensity in host populations. Here we show that a reduction of rainforest canopy cover caused by a severe tropical cyclone decreased the risk of endangered rainforest frogs (Litoria rheocola) becoming infected by a fungal pathogen (Batrachochytrium dendrobatidis). Reductions in canopy cover increased the temperatures and rates of evaporative water loss in frog microhabitats, which reduced B. dendrobatidis infection risk in frogs by an average of 11-28% in cyclone-damaged areas, relative to unaffected areas. Natural disturbances to the rainforest canopy can therefore provide an immediate benefit to frogs by altering the microclimate in ways that reduce infection risk. This could increase host survival and reduce the probability of epidemic disease outbreaks. For amphibian populations under immediate threat from this pathogen, targeted manipulation of canopy cover could increase the availability of warmer, drier microclimates and therefore tip the balance from host extinction to coexistence.

Eleutherodactylus frog introductions to Hawaii

Science.gov (United States)

Kraus, Fred; Campbell, Earl W.; Allison, Allen; Pratt, Thane K.

1999-01-01

As an oceanic archipelago isolated from continental source areas, Hawaii lacks native terrestrial reptiles and amphibians, Polynesians apparently introduced seven gecko and skink species after discovering the islands approximately 1500 years ago, and another 15 reptiles and five frogs have been introduced in the last century and a half (McKeown 1996). The Polynesian introductions are probably inadvertent because the species involved are known stowaway dispersers (Gibbons 1985; Dye and Steadman 1990), In contrast, most of the herpetological introductions since European contact with Hawaii have been intentional. Several frog species were released for biocontrol of insects (e.g., Dendrobates auratus, Bufo marinus, Rana rugosa, Bryan 1932; Oliver and Shaw 1953), and most of the remaining species are released or escaped pets (e.g., Phelsuma spp., Chamaeleo jacksonii, Iguana iguana, McKeown 1996), Government-approved releases have not occurred for many years, but the rate of establishment of new species has increased in the past few decades because of the importation and subsequent release of pets.

Effects of invasive cordgrass on presence of Marsh Grassbird in an area where it is not native.

Science.gov (United States)

Ma, Zhijun; Gan, Xiaojing; Choi, Chi-Yeung; Li, Bo

2014-02-01

The threatened Marsh Grassbird (Locustella pryeri) first appeared in the salt marsh in east China after the salt marsh was invaded by cordgrass (Spartina alterniflora), a non-native invasive species. To understand the dependence of non-native Marsh Grassbird on the non-native cordgrass, we quantified habitat use, food source, and reproductive success of the Marsh Grassbird at the Chongming Dongtan (CMDT) salt marsh. In the breeding season, we used point counts and radio-tracking to determine habitat use by Marsh Grassbirds. We analyzed basal food sources of the Marsh Grassbirds by comparing the δ(13) C isotope signatures of feather and fecal samples of birds with those of local plants. We monitored the nests through the breeding season and determined the breeding success of the Marsh Grassbirds at CMDT. Density of Marsh Grassbirds was higher where cordgrass occurred than in areas of native reed (Phragmites australis) monoculture. The breeding territory of the Marsh Grassbird was composed mainly of cordgrass stands, and nests were built exclusively against cordgrass stems. Cordgrass was the major primary producer at the base of the Marsh Grassbird food chain. Breeding success of the Marsh Grassbird at CMDT was similar to breeding success within its native range. Our results suggest non-native cordgrass provides essential habitat and food for breeding Marsh Grassbirds at CMDT and that the increase in Marsh Grassbird abundance may reflect the rapid spread of cordgrass in the coastal regions of east China. Our study provides an example of how a primary invader (i.e., cordgrass) can alter an ecosystem and thus facilitate colonization by a second non-native species. © 2013 Society for Conservation Biology.

Greenhouse gas emissions in salt marshes and their response to nitrogen loading

Science.gov (United States)

Tang, J.; Moseman-Valtierra, S.; Kroeger, K. D.; Morkeski, K.; Carey, J.

2015-12-01

Salt marshes play an important role in global and regional carbon and nitrogen cycling. Anthropogenic nitrogen loading may alter greenhouse gas (GHG, including CO2, CH4, and N2O) emissions and carbon sequestration in salt marshes. We measured GHG emissions biweekly for two growing seasons across a nitrogen-loading gradient of four Spartina salt marshes in Waquoit Bay, Massachusetts. In addition, we conducted nitrogen addition experiments in a pristine marsh by adding low and high nitrate bi-weekly during the summer. The GHG flux measurements were made in situ with a state-of-the-art mobile gas measurement system using the cavity ring down technology that consists of a CO2/CH4 analyzer (Picarro) and an N2O/CO analyzer (Los Gatos). We observed strong seasonal variations in greenhouse gas emissions. The differences in gas emissions across the nitrogen gradient (between 1 and 10 gN m-2y-1) were not significant, but strong pulse emissions of N2O were observed after nitrogen was artificially added to the marsh. We found that the studied salt marsh was a significant carbon sink (NEP ~ 380 gC m-2y-1). CH4 fluxes are 3 orders of magnitude less than CO2 fluxes in the salt marsh. Carbon fluxes are driven by light, salinity, tide, and temperature. We conclude that restoration or conservation of this carbon sink has a significant social benefit for carbon credit.

Dry-season retreat and dietary shift of the dart-poison frog Dendrobates tinctorius (Anura: Dendrobatidae

Directory of Open Access Journals (Sweden)

Marga Born

2010-07-01

Full Text Available Seasonal rainfall affects tropical forest dynamics and behaviorof species that are part of these ecosystems. The positive correlation between amphibian activity patterns and rainfall has been demonstrated repeatedly. Members of Dendrobatidae, a clade of Neotropical dart-poison frogs, are well known for their habitat use and behavior during the rainy season, but their behavior during the dry season has received little attention. We studied habitat use and diet of the dendrobatid frog Dendrobates tinctorius in French Guiana during the rainy and dry seasons. Unlike many other dendrobatid frogs, D. tinctorius does not maintain territories for the entire rainy season. Both sexes colonize recently formed canopy-gaps and stay in these forest patches for only a few weeks. The frogs inthese patches consume a great diversity of prey, consisting of ants, beetles, wasps, insect larvae, and mites. During the dry season, frogs move to retreat sites in mature forest, such as palm bracts and tree holes. The frogs are less active and consume fewer prey items in the dry season, and they consume fewer wasps and insect larvae, but more termites. Ants are the most common prey items during both the wet and dry seasons. We discuss the effects of shifts in seasonal habitat use on the territorial behavior of dendrobatid frogs.

Zooming in and out: Scale dependence of extrinsic and intrinsic factors affecting salt marsh erosion

Science.gov (United States)

Wang, Heng; van der Wal, Daphne; Li, Xiangyu; van Belzen, Jim; Herman, Peter M. J.; Hu, Zhan; Ge, Zhenming; Zhang, Liquan; Bouma, Tjeerd J.

2017-07-01

Salt marshes are valuable ecosystems that provide important ecosystem services. Given the global scale of marsh loss due to climate change and coastal squeeze, there is a pressing need to identify the critical extrinsic (wind exposure and foreshore morphology) and intrinsic factors (soil and vegetation properties) affecting the erosion of salt marsh edges. In this study, we quantified rates of cliff lateral retreat (i.e., the eroding edge of a salt marsh plateau) using a time series of aerial photographs taken over four salt marsh sites in the Westerschelde estuary, the Netherlands. In addition, we experimentally quantified the erodibility of sediment cores collected from the marsh edge of these four marshes using wave tanks. Our results revealed the following: (i) at the large scale, wind exposure and the presence of pioneer vegetation in front of the cliff were the key factors governing cliff retreat rates; (ii) at the intermediate scale, foreshore morphology was partially related to cliff retreat; (iii) at the local scale, the erodibility of the sediment itself at the marsh edge played a large role in determining the cliff retreat rate; and (iv) at the mesocosm scale, cliff erodibility was determined by soil properties and belowground root biomass. Thus, both extrinsic and intrinsic factors determined the fate of the salt marsh but at different scales. Our study highlights the importance of understanding the scale dependence of the factors driving the evolution of salt marsh landscapes.

Archaeobatrachian paraphyly and pangaean diversification of crown-group frogs.

Science.gov (United States)

Roelants, Kim; Bossuyt, Franky

2005-02-01

Current models for the early diversification of living frogs inferred from morphological, ontogenetic, or DNA sequence data invoke very different scenarios of character evolution and biogeography. To explore central controversies on the phylogeny of Anura, we analyzed nearly 4000 base pairs of mitochondrial and nuclear DNA for the major frog lineages. Likelihood-based analyses of this data set are congruent with morphological evidence in supporting a paraphyletic arrangement of archaeobatrachian frogs, with an (Ascaphus + Leiopelma) clade as the sister-group of all other living anurans. The stability of this outcome is reinforced by screening for phylogenetic bias resulting from site-specific rate variation, homoplasy, or the obligatory use of distantly related outgroups. Twenty-one alternative branching and rooting hypotheses were evaluated using a nonparametric multicomparison test and parametric bootstrapping. Relaxed molecular clock estimates situate the emergence of crown-group anurans in the Triassic, approximately 55 million years prior to their first appearance in the fossil record. The existence of at least four extant frog lineages on the supercontinent Pangaea before its breakup gains support from the estimation that three early splits between Laurasia- and Gondwana-associated families coincide with the initial rifting of these landmasses. This observation outlines the potential significance of this breakup event in the formation of separate Mesozoic faunal assemblages in both hemispheres.

Physical and Biological Regulation of Carbon Sequestration in Tidal Marshes

Science.gov (United States)

Morris, J. T.; Callaway, J.

2017-12-01

The rate of carbon sequestration in tidal marshes is regulated by complex feedbacks among biological and physical factors including the rate of sea-level rise (SLR), biomass production, tidal amplitude, and the concentration of suspended sediment. We used the Marsh Equilibrium Model (MEM) to explore the effects on C-sequestration across a wide range of permutations of these variables. C-sequestration increased with the rate of SLR to a maximum, then down to a vanishing point at higher SLR when marshes convert to mudflats. An acceleration in SLR will increase C-sequestration in marshes that can keep pace, but at high rates of SLR this is only possible with high biomass and suspended sediment concentrations. We found that there were no feasible solutions at SLR >13 mm/yr for permutations of variables that characterize the great majority of tidal marshes, i.e., the equilibrium elevation exists below the lower vertical limit for survival of marsh vegetation. The rate of SLR resulting in maximum C-sequestration varies with biomass production. C-sequestration rates at SLR=1 mm/yr averaged only 36 g C m-2 yr-1, but at the highest maximum biomass tested (5000 g/m2) the mean C-sequestration reached 399 g C m-2 yr-1 at SLR = 14 mm/yr. The empirical estimate of C-sequestration in a core dated 50-years overestimates the theoretical long-term rate by 34% for realistic values of decomposition rate and belowground production. The overestimate of the empirical method arises from the live and decaying biomass contained within the carbon inventory above the marker horizon, and overestimates were even greater for shorter surface cores.

Semaphoring in an earless frog: the origin of a novel visual signal.

Science.gov (United States)

Lindquist, E D; Hetherington, T E

1998-10-01

Social communication in anuran amphibians (frogs and toads) is mediated predominantly by acoustic signals. Unlike most anurans, the Panamanian golden frog, Atelopus zeteki, lacks a standard tympanic middle ear and appears to have augmented its communicatory repertoire to include rotational limb motions as visual signals, referred to here as semaphores. The communicatory nature of semaphoring was inferred from experimental manipulations using mirrored self-image presentations and nonresident introductions. Male frogs semaphored significantly more when presented with a mirrored self-image than with a nonreflective control. Novel encounters between resident males and nonresident frogs demonstrated that semaphores were used directionally and were displayed toward target individuals. Females semaphored frequently and this observation represents a rare case of signaling by females in a typically male-biased communicatory regime. Semaphore actions were clearly linked to a locomotory gait pattern and appear to have originated as an elaboration of a standard stepping motion.

Vegetation - Suisun Marsh 2000 [ds161

Data.gov (United States)

California Natural Resource Agency — This vegetation mapping project of Suisun Marsh blends ground-based classification, aerial photo interpretation, and GIS editing and processing. The method is based...

Vegetation - Suisun Marsh 1999 [ds160

Data.gov (United States)

California Natural Resource Agency — This vegetation mapping project of Suisun Marsh blends ground-based classification, aerial photo interpretation, and GIS editing and processing. The method is based...

Vegetation - Suisun Marsh 2003 [ds162

Data.gov (United States)

California Natural Resource Agency — This vegetation mapping project of Suisun Marsh blends ground-based classification, aerial photo interpretation, and GIS editing and processing. The method is based...

Coupled Wave Energy and Erosion Dynamics along a Salt Marsh Boundary, Hog Island Bay, Virginia, USA

Directory of Open Access Journals (Sweden)

Anthony M. Priestas

2015-09-01

Full Text Available The relationship between lateral erosion of salt marshes and wind waves is studied in Hog Island Bay, Virginia USA, with high-resolution field measurements and aerial photographs. Marsh retreat is compared to wave climate calculated in the bay using the spectral wave-model Simulating Waves Nearshore (SWAN. We confirm the existence of a linear relationship between long-term salt marsh erosion and wave energy, and show that wave power can serve as a good proxy for average salt-marsh erosion rates. At each site, erosion rates are consistent across several temporal scales, ranging from months to decades, and are strongly related to wave power. On the contrary, erosion rates vary in space and weakly depend on the spatial distribution of wave energy. We ascribe this variability to spatial variations in geotechnical, biological, and morphological marsh attributes. Our detailed field measurements indicate that at a small spatial scale (tens of meters, a positive feedback between salt marsh geometry and wave action causes erosion rates to increase with boundary sinuosity. However, at the scale of the entire marsh boundary (hundreds of meters, this relationship is reversed: those sites that are more rapidly eroding have a marsh boundary which is significantly smoother than the marsh boundary of sheltered and slowly eroding marshes.

Monitoring coastal marshes biomass with CASI: a comparison of parametric and non-parametric models

Science.gov (United States)

Mo, Y.; Kearney, M.

2017-12-01

Coastal marshes are important carbon sinks that face multiple natural and anthropogenic stresses. Optical remote sensing is a powerful tool for closely monitoring the biomass of coastal marshes. However, application of hyperspectral sensors on assessing the biomass of diverse coastal marsh ecosystems is limited. This study samples spectral and biophysical data from coastal freshwater, intermediate, brackish, and saline marshes in Louisiana, and develops parametric and non-parametric models for using the Compact Airborne Spectrographic Imager (CASI) to retrieve the marshes' biomass. Linear models and random forest models are developed from simulated CASI data (48 bands, 380-1050 nm, bandwidth 14 nm). Linear models are also developed using narrowband vegetation indices computed from all possible band combinations from the blue, red, and near infrared wavelengths. It is found that the linear models derived from the optimal narrowband vegetation indices provide strong predictions for the marshes' Leaf Area Index (LAI; R2 > 0.74 for ARVI), but not for their Aboveground Green Biomass (AGB; R2 > 0.25). The linear models derived from the simulated CASI data strongly predict the marshes' LAI (R2 = 0.93) and AGB (R2 = 0.71) and have 27 and 30 bands/variables in the final models through stepwise regression, respectively. The random forest models derived from the simulated CASI data also strongly predict the marshes' LAI and AGB (R2 = 0.91 and 0.84, respectively), where the most important variables for predicting LAI are near infrared bands at 784 and 756 nm and for predicting ABG are red bands at 684 and 670 nm. In sum, the random forest model is preferable for assessing coastal marsh biomass using CASI data as it offers high R2 for both LAI and AGB. The superior performance of the random forest model is likely to due to that it fully utilizes the full-spectrum data and makes no assumption of the approximate normality of the sampling population. This study offers solutions

Biodiversity of frog haemoparasites from sub-tropical northern KwaZulu-Natal, South Africa.

Science.gov (United States)

Netherlands, Edward C; Cook, Courtney A; Kruger, Donnavan J D; du Preez, Louis H; Smit, Nico J

2015-04-01

Since South Africa boasts a high biodiversity of frog species, a multispecies haemoparasite survey was conducted by screening the blood from 29 species and 436 individual frogs. Frogs were collected at three localities in sub-tropical KwaZulu-Natal, a hotspot for frog diversity. Twenty per cent of the frogs were infected with at least one of five groups of parasites recorded. Intraerythrocytic parasites comprising Hepatozoon, Dactylosoma, and viral or bacterial organisms, as well as extracellular parasites including trypanosomes and microfilarid nematodes were found. A significant difference (P frog species. None of those species described as purely terrestrial and aquatic were infected. Hepatozoon and Trypanosoma species accounted for most of the infections, the former demonstrating significant differences in intensity of infection across species, families and habitat types (P = 0.028; P = 0.006; P = 0.007 respectively). Per locality, the first, the formally protected Ndumo Game Reserve, had the highest biodiversity of haemoparasite infections, with all five groups of parasites recorded. The other two sites, that is the area bordering the reserve and the Kwa Nyamazane Conservancy, had a lower diversity with no parasite infections recorded and only Hepatozoon species recorded respectively. Such findings could be ascribed to the anthropogenic impact on the latter two sites, the first by the rural village activities, and the second by the bordering commercial sugar cane agriculture. Future studies should include both morphological and molecular descriptions of the above parasites, as well as the identification of potential vectors, possibly clarifying the effects human activities may have on frog haemoparasite life cycles and as such their biodiversity.

Salt marsh and seagrass communities of Bakkhali Estuary, Cox's Bazar, Bangladesh

Science.gov (United States)

Hena, M. K. Abu; Short, F. T.; Sharifuzzaman, S. M.; Hasan, M.; Rezowan, M.; Ali, M.

2007-10-01

The species identification, distribution pattern, density and biomass of salt marsh and seagrass plants with some of the ecological parameters were studied in the Bakkhali river estuary, Cox's Bazar, Bangladesh during the first half of 2006. Two salt marsh species ( Spartina sp. and Imperata cylindrica) and one seagrass species ( Halophila beccarii) were identified during this investigation, providing the first reports of Spartina sp. and H. beccarii in coastal Bangladesh. Seagrass H. beccarii was found in an accreted area and co-existing with salt marsh, and scattered sparsely in the salt marsh habitat and macroalgae Ulva intestinalis. Flowering and fruiting were recorded from the seagrass H. beccarri during January and February. No flowers and fruits were observed for the salt marsh Spartina sp. during the study period. Results showed that the shoot density of Spartina ranged from 400 to 2875 shoots m -2 with the highest total biomass (165.80 g dry weight (DW) m -2) in March. Shoot density of H. beccarii ranged from 2716 to 14320 shoots m -2 in this estuarine coastal environment. The total biomass of seagrass was higher (17.56 g DW m -2) in March compared to the other months. The highest H. beccarii above ground (AG) biomass and below ground (BG) biomass were 9.59 g DW m -2 and 9.42 g DW m -2, respectively. These parameters are comparable with those generally observed for the salt marsh and seagrass species in the other places of the world.

A Climate Change Adaptation Strategy for Management of Coastal Marsh Systems

Science.gov (United States)

Sea level rise is causing shoreline erosion, increased coastal flooding, and marsh vulnerability to the impact of storms. Coastal marshes provide flood abatement, carbon and nutrient sequestration, water quality maintenance, and habitat for fish, shellfish, and wildlife, includin...

Effects of nitrogen loading on greenhouse gas emissions in salt marshes

Science.gov (United States)

Tang, J.; Moseman-Valtierra, S.; Kroeger, K. D.; Morkeski, K.; Mora, J.; Chen, X.; Carey, J.

2014-12-01

Salt marshes play an important role in global and regional carbon and nitrogen cycling. We tested the hypothesis that anthropogenic nitrogen loading alters greenhouse gas (GHG, including CO2, CH4, and N2O) emissions and carbon sequestration in salt marshes. We measured GHG emissions biweekly for two growing seasons across a nitrogen-loading gradient of four Spartina salt marshes in Waquoit Bay, Massachusetts. In addition, we conducted nitrogen addition experiments in a pristine marsh by adding low and high nitrate to triplicate plots bi-weekly during the summer. The GHG flux measurements were made in situ with a state-of-the-art mobile gas measurement system using the cavity ring down technology that consists of a CO2/CH4 analyzer (Picarro) and an N2O/CO analyzer (Los Gatos). We observed strong seasonal variations in greenhouse gas emissions. The differences in gas emissions across the nitrogen gradient were not significant, but strong pulse emissions of N2O were observed after nitrogen was artificially added to the marsh. Our results will facilitate model development to simulate GHG emissions in coastal wetlands and support methodology development to assess carbon credits in preserving and restoring coastal wetlands.

A linear relationship between wave power and erosion determines salt-marsh resilience to violent storms and hurricanes

Science.gov (United States)

Leonardi, Nicoletta; Ganju, Neil K.; Fagherazzi, Sergio

2016-01-01

Salt marsh losses have been documented worldwide because of land use change, wave erosion, and sea-level rise. It is still unclear how resistant salt marshes are to extreme storms and whether they can survive multiple events without collapsing. Based on a large dataset of salt marsh lateral erosion rates collected around the world, here, we determine the general response of salt marsh boundaries to wave action under normal and extreme weather conditions. As wave energy increases, salt marsh response to wind waves remains linear, and there is not a critical threshold in wave energy above which salt marsh erosion drastically accelerates. We apply our general formulation for salt marsh erosion to historical wave climates at eight salt marsh locations affected by hurricanes in the United States. Based on the analysis of two decades of data, we find that violent storms and hurricanes contribute less than 1% to long-term salt marsh erosion rates. In contrast, moderate storms with a return period of 2.5 mo are those causing the most salt marsh deterioration. Therefore, salt marshes seem more susceptible to variations in mean wave energy rather than changes in the extremes. The intrinsic resistance of salt marshes to violent storms and their predictable erosion rates during moderate events should be taken into account by coastal managers in restoration projects and risk management plans.

A linear relationship between wave power and erosion determines salt-marsh resilience to violent storms and hurricanes.

Science.gov (United States)

Leonardi, Nicoletta; Ganju, Neil K; Fagherazzi, Sergio

2016-01-05

Salt marsh losses have been documented worldwide because of land use change, wave erosion, and sea-level rise. It is still unclear how resistant salt marshes are to extreme storms and whether they can survive multiple events without collapsing. Based on a large dataset of salt marsh lateral erosion rates collected around the world, here, we determine the general response of salt marsh boundaries to wave action under normal and extreme weather conditions. As wave energy increases, salt marsh response to wind waves remains linear, and there is not a critical threshold in wave energy above which salt marsh erosion drastically accelerates. We apply our general formulation for salt marsh erosion to historical wave climates at eight salt marsh locations affected by hurricanes in the United States. Based on the analysis of two decades of data, we find that violent storms and hurricanes contribute less than 1% to long-term salt marsh erosion rates. In contrast, moderate storms with a return period of 2.5 mo are those causing the most salt marsh deterioration. Therefore, salt marshes seem more susceptible to variations in mean wave energy rather than changes in the extremes. The intrinsic resistance of salt marshes to violent storms and their predictable erosion rates during moderate events should be taken into account by coastal managers in restoration projects and risk management plans.

Prostaglandin E2 release from dermis regulates sodium permeability of frog skin epithelium

DEFF Research Database (Denmark)

Rytved, Klaus A.; Brodin, Birger; Nielsen, Robert

1995-01-01

Arachidonic acid, cAMP, epithelium, frog skin, intracellular calcium, prostaglandin E*U2, sodium transport, tight epithelium.......Arachidonic acid, cAMP, epithelium, frog skin, intracellular calcium, prostaglandin E*U2, sodium transport, tight epithelium....

Evaluation of nekton use and habitat characteristics of restored Louisiana marsh

Science.gov (United States)

Thom, C.S.B.; Peyre, M.K.G.L.; Nyman, J.A.

2004-01-01

Marsh terracing and coconut fiber mats are two wetland restoration techniques implemented at Sabine National Wildlife Refuge, Louisiana, USA. Using nekton as an indicator of habitat quality, nekton community assemblages were compared between terraced, coconut-matted, unmanaged marsh (restoration goal), and open water (pre-restoration) habitats. Using a throw trap and a 3 m ?? 2 m straight seine, 192 nekton samples were collected over four dates in 2001 and 2002 at all habitats. Nekton abundance was similar at unmanaged marsh (restoration goal), coconut mat, and terrace edge, and significantly higher than at open water (pre-restoration) sites (P Coconut-matted habitat and unmanaged marsh edges had significantly higher numbers of benthic dependent species than terrace edges (P coconut-matted sites. Future restoration projects may evaluate the combined use of coconut mats with terracing projects in order to enhance habitat for benthic dependent nekton.

Sexual differences in prevalence of a new species of trypanosome infecting t?ngara frogs

OpenAIRE

Bernal, Ximena E.; Pinto, C. Miguel

2016-01-01

Trypanosomes are a diverse group of protozoan parasites of vertebrates transmitted by a variety of hematophagous invertebrate vectors. Anuran trypanosomes and their vectors have received relatively little attention even though these parasites have been reported from frog and toad species worldwide. Blood samples collected from túngara frogs (Engystomops pustulosus), a Neotropical anuran species heavily preyed upon by eavesdropping frog-biting midges (Corethrella spp.), were examined for trypa...

Effects of livestock species and stocking density on accretion rates in grazed salt marshes

NARCIS (Netherlands)

Nolte, Stefanie; Esselink, Peter; Bakker, Jan P.; Smit, Christian

2015-01-01

Coastal ecosystems, such as salt marshes, are threatened by accelerated sea-level rise (SLR). Salt marshes deliver valuable ecosystem services such as coastal protection and the provision of habitat for a unique flora and fauna. Whether salt marshes in the Wadden Sea area are able to survive

Detecting fish parvalbumin with commercial mouse monoclonal anti-frog parvalbumin IgG.

Science.gov (United States)

Chen, Lingyun; Hefle, Sue L; Taylor, Steve L; Swoboda, Ines; Goodman, Richard E

2006-07-26

Parvalbumin is a calcium-binding muscle protein that is highly conserved across fish species and amphibians. It is the major cross-reactive allergen associated with both fish and frog allergy. We used two-dimensional electrophoretic and immunoblotting techniques to investigate the utility of a commercial monoclonal anti-frog parvalbumin IgG for detecting parvalbumin present in some commonly consumed fish species. The 2D electrophoresis and immunoblots revealed species-specific differences in proteins that appear to represent various numbers of isoforms of parvalbumin in carp (5), catfish (3), cod (1) and tilapia (2). No parvalbumin was detected in yellowfin tuna. Based on minor differences in relative intensities of protein staining and immunodetection, parvalbumin isoforms may have slight differences in the epitope region recognized by the anti-frog parvalbumin antibody. These results suggest that the frog anti-parvalbumin antibody can be used as a valuable tool to detect parvalbumins from the fish tested in this study, except yellowfin tuna.

Greenhouse gas fluxes from salt marshes exposed to chronic nutrient enrichment

Science.gov (United States)

Chmura, Gail L.; Kellman, Lisa; van Ardenne, Lee; Guntenspergen, Glenn R.

2016-01-01

We assessed the impact of nutrient additions on greenhouse gas fluxes using dark static chambers in a microtidal and a macrotidal marsh along the coast of New Brunswick, Canada approximately monthly over a year. Both were experimentally fertilized for six years with varying levels of N and P. For unfertilized, N and NPK treatments, average yearly CO2 emissions (which represent only respiration) at the microtidal marsh (13, 19, and 28 mmoles CO2 m-2 hr-1, respectively) were higher than at the macrotidal marsh (12, 15, and 19 mmoles m-2 hr-1, respectively, with a flux under the additional high N/low P treatment of 21 mmoles m-2 hr-1). Response of CH4 to fertilization was more variable. At the macrotidal marsh average yearly fluxes were 1.29, 1.26, and 0.77 μmol CH4 m-2 hr-1 with control, N, and NPK treatments, respectively and 1.21 μmol m-2 hr-1 under high N/low P treatment. At the microtidal marsh CH4fluxes were 0.23, 0.16, and -0.24 μmol CH4 m-2 hr-1 in control, N, and NPK and treatments, respectively. Fertilization changed soils from sinks to sources of N2O. Average yearly N2O fluxes at the macrotidal marsh were -0.07, 0.08, and 1.70, μmol N2O m-2 hr-1 in control, N, NPK and treatments, respectively and 0.35 μmol m-2 hr-1 under high N/low P treatment. For the control, N, and NPK treatments at the microtidal marsh N2O fluxes were -0.05, 0.30, and 0.52 μmol N2O m-2 hr-1, respectively. Our results indicate that N2O fluxes are likely to vary with the source of pollutant nutrients but emissions will be lower if N is not accompanied by an adequate supply of P (e.g., atmospheric deposition vs sewage or agricultural runoff). With chronic fertilization the global warming potential of the increased N2O emissions may be enough to offset the global cooling potential of the C sequestered by salt marshes.

Effects of the Chytrid fungus on the Tarahumara frog (Rana tarahumarae) in Arizona and Sonora, Mexico

Science.gov (United States)

Stephen F. Hale; Philip C. Rosen; James L. Jarchow; Gregory A. Bradley

2005-01-01

We conducted histological analyses on museum specimens collected 1975-1999 from 10 sites in Arizona and Sonora to test for the pathogenic chytrid fungus (Batrachochytrium dendrobatidis) in ranid frogs, focusing on the Tarahumara frog (Rana tarahumarae). During 1981-2000, frogs displaying disease signs were found in the field, and...

Dietary alkaloid sequestration in a poison frog: an experimental test of alkaloid uptake in Melanophryniscus stelzneri (Bufonidae).

Science.gov (United States)

Hantak, Maggie M; Grant, Taran; Reinsch, Sherri; McGinnity, Dale; Loring, Marjorie; Toyooka, Naoki; Saporito, Ralph A

2013-12-01

Several lineages of brightly colored anurans independently evolved the ability to secrete alkaloid-containing defensive chemicals from granular glands in the skin. These species, collectively referred to as 'poison frogs,' form a polyphyletic assemblage that includes some species of Dendrobatidae, Mantellidae, Myobatrachidae, Bufonidae, and Eleutherodactylidae. The ability to sequester alkaloids from dietary arthropods has been demonstrated experimentally in most poison frog lineages but not in bufonid or eleutherodactylid poison frogs. As with other poison frogs, species of the genus Melanophryniscus (Bufonidae) consume large numbers of mites and ants, suggesting they might also sequester defensive alkaloids from dietary sources. To test this hypothesis, fruit flies dusted with alkaloid/nutritional supplement powder were fed to individual Melanophryniscus stelzneri in two experiments. In the first experiment, the alkaloids 5,8-disubstituted indolizidine 235B' and decahydroquinoline were administered to three individuals for 104 days. In the second experiment, the alkaloids 3,5-disubstituted indolizidine 239Q and decahydroquinoline were given to three frogs for 153 days. Control frogs were fed fruit flies dusted only with nutritional supplement. Gas chromatography/mass spectrometry analyses revealed that skin secretions of all experimental frogs contained alkaloids, whereas those of all control frogs lacked alkaloids. Uptake of decahydroquinoline was greater than uptake of 5,8-disubstituted indolizidine, and uptake of 3,5-disubstituted indolizidine was greater than uptake of decahydroquinoline, suggesting greater uptake efficiency of certain alkaloids. Frogs in the second experiment accumulated a greater amount of alkaloid, which corresponds to the longer duration and greater number of alkaloid-dusted fruit flies that were consumed. These findings provide the first experimental evidence that bufonid poison frogs sequester alkaloid-based defenses from dietary

Differentiation of frog fats from vegetable and marine oils by Fourier Transform Infrared Spectroscopy and chemometric analysis

Directory of Open Access Journals (Sweden)

A. N. Nina Naquiah

2015-01-01

Full Text Available The agro-based production and consumption of frogs coupled with world-wide trading have been increased in the recent years giving rise to the risk of frog fat adulteration in expensive vegetable and marine oils. For the first time, we profiled here frog fats using Fourier Transform Infrared (FTIR Spectroscopy coupled with multivariate principal component analysis (PCA. The comparison of the FTIR spectral absorbance intensities demonstrated linkage of frog fats to other edible fats and oils. Three commercially available marine oils and three vegetables oils were studied with frog fats and clear pattern of clusters with distinctive identifiable features were obtained through PCA modeling. PCA analysis identified 2922.21 cm-1, 2852.88 cm-1, 1745.45 cm-1, 1158.29 cm-1 and 721.51 cm-1 FTIR-frequencies as the most discriminating variables influencing the group separation into different clusters. This fundamental study has clear implications in the identification of frog fat from its marine and vegetable counterparts for the potential detection of frog fat adulteration in various fat and oils.

Biodiversity of frog haemoparasites from sub-tropical northern KwaZulu-Natal, South Africa

Directory of Open Access Journals (Sweden)

Edward C. Netherlands

2015-04-01

Full Text Available Since South Africa boasts a high biodiversity of frog species, a multispecies haemoparasite survey was conducted by screening the blood from 29 species and 436 individual frogs. Frogs were collected at three localities in sub-tropical KwaZulu-Natal, a hotspot for frog diversity. Twenty per cent of the frogs were infected with at least one of five groups of parasites recorded. Intraerythrocytic parasites comprising Hepatozoon, Dactylosoma, and viral or bacterial organisms, as well as extracellular parasites including trypanosomes and microfilarid nematodes were found. A significant difference (P < 0.01 in the prevalence of parasitaemia was found across species, those semi-aquatic species demonstrating the highest, followed by semi-terrestrial frog species. None of those species described as purely terrestrial and aquatic were infected. Hepatozoon and Trypanosoma species accounted for most of the infections, the former demonstrating significant differences in intensity of infection across species, families and habitat types (P = 0.028; P = 0.006; P = 0.007 respectively. Per locality, the first, the formally protected Ndumo Game Reserve, had the highest biodiversity of haemoparasite infections, with all five groups of parasites recorded. The other two sites, that is the area bordering the reserve and the Kwa Nyamazane Conservancy, had a lower diversity with no parasite infections recorded and only Hepatozoon species recorded respectively. Such findings could be ascribed to the anthropogenic impact on the latter two sites, the first by the rural village activities, and the second by the bordering commercial sugar cane agriculture. Future studies should include both morphological and molecular descriptions of the above parasites, as well as the identification of potential vectors, possibly clarifying the effects human activities may have on frog haemoparasite life cycles and as such their biodiversity.

The contribution of mangrove expansion to salt marsh loss on the Texas Gulf Coast.

Science.gov (United States)

Armitage, Anna R; Highfield, Wesley E; Brody, Samuel D; Louchouarn, Patrick

2015-01-01

Landscape-level shifts in plant species distribution and abundance can fundamentally change the ecology of an ecosystem. Such shifts are occurring within mangrove-marsh ecotones, where over the last few decades, relatively mild winters have led to mangrove expansion into areas previously occupied by salt marsh plants. On the Texas (USA) coast of the western Gulf of Mexico, most cases of mangrove expansion have been documented within specific bays or watersheds. Based on this body of relatively small-scale work and broader global patterns of mangrove expansion, we hypothesized that there has been a recent regional-level displacement of salt marshes by mangroves. We classified Landsat-5 Thematic Mapper images using artificial neural networks to quantify black mangrove (Avicennia germinans) expansion and salt marsh (Spartina alterniflora and other grass and forb species) loss over 20 years across the entire Texas coast. Between 1990 and 2010, mangrove area grew by 16.1 km(2), a 74% increase. Concurrently, salt marsh area decreased by 77.8 km(2), a 24% net loss. Only 6% of that loss was attributable to mangrove expansion; most salt marsh was lost due to conversion to tidal flats or water, likely a result of relative sea level rise. Our research confirmed that mangroves are expanding and, in some instances, displacing salt marshes at certain locations. However, this shift is not widespread when analyzed at a larger, regional level. Rather, local, relative sea level rise was indirectly implicated as another important driver causing regional-level salt marsh loss. Climate change is expected to accelerate both sea level rise and mangrove expansion; these mechanisms are likely to interact synergistically and contribute to salt marsh loss.

Evaluation of use of tiletamine/zolazepam for anesthesia of bullfrogs and leopard frogs.

Science.gov (United States)

Letcher, J; Durante, R

1995-07-01

Use of tiletamine hydrochloride and zolazepam hydrochloride (1:1 fixed ratio combination) as an anesthetic agent in 2 anuran species was studied. A dosage of 5 mg/kg of body weight, administered IM, resulted in variable weak tranquilization. Intramuscular administration at dosages of 10 and 20 mg/kg induced variable states of tranquilization or anesthesia in leopard frogs (Rana pipiens) and bullfrogs (R catesbeiana). The dosages of 50 mg/kg induced anesthesia with greater consistency than lower dosages in bullfrogs, but resulted in mortalities. The same dosage was uniformly fatal in leopard frogs. Neither gross nor histologic lesions were identified in the frogs that died. Depth and duration of anesthesia was dosage related. At the 20 and 50 mg/kg dosages, leopard frogs attained a greater depth of anesthesia and remained anesthetized for a significantly greater duration than did bullfrogs; however, at the 5 and 10 mg/kg dosages, bullfrogs developed greater tranquilization for longer periods than did leopard frogs. Results of this study revealed profound intraspecies variation in depth and duration of effect of tiletamine/zolazepam; therefore, the drug does not appear to be a suitable injectable anesthetic in anurans.

Total sialic acid profile in regressing and remodelling organs during the metamorphosis of marsh frog (Pelophylax ridibundus Pallas 1771).

Science.gov (United States)

Kaptan, Engin; Bas, Serap Sancar; Inceli, Meliha Sengezer

2013-03-01

This study aimed to investigate the functional relationship of sialic acid in regressing and remodelling organs such as the tail, small intestine and liver during the metamorphosis of Pelophylax ridibundus. For this purpose, four groups were composed according to developmental periods by considering Gosner's criteria (1964). Our findings showed that the sialic acid content of the larval tail has an opposite profile to cell death process. Although the sialic acid content of the small intestine and liver did not change evidently during metamorphosis, it increased after the completion of metamorphosis. Frog tail extensively exhibited cell death process and decreased proliferative activity and underwent complete degeneration during metamorphic climax. In spite of increased apoptotic index, a decreased sialic acid level in the tail tissues during climax can be the indication of a death cell removal process. However, the intestine and the liver included both cell death and proliferative process and remodelling in their adult forms. Thus, their sialic acid profiles during metamorphosis were different from the tail's profile. These data show that sialic acid may be an indicator of the presence of some cellular events during metamorphosis and that it can have different roles in the developmental process depending on the organ's fate throughout metamorphosis. Copyright © 2012 John Wiley & Sons, Ltd.

Summary of intrinsic and extrinsic factors affecting detection probability of marsh birds

Science.gov (United States)

Conway, C.J.; Gibbs, J.P.

2011-01-01

Many species of marsh birds (rails, bitterns, grebes, etc.) rely exclusively on emergent marsh vegetation for all phases of their life cycle, and many organizations have become concerned about the status and persistence of this group of birds. Yet, marsh birds are notoriously difficult to monitor due to their secretive habits. We synthesized the published and unpublished literature and summarized the factors that influence detection probability of secretive marsh birds in North America. Marsh birds are more likely to respond to conspecific than heterospecific calls, and seasonal peak in vocalization probability varies among co-existing species. The effectiveness of morning versus evening surveys varies among species and locations. Vocalization probability appears to be positively correlated with density in breeding Virginia Rails (Rallus limicola), Soras (Porzana carolina), and Clapper Rails (Rallus longirostris). Movement of birds toward the broadcast source creates biases when using count data from callbroadcast surveys to estimate population density. Ambient temperature, wind speed, cloud cover, and moon phase affected detection probability in some, but not all, studies. Better estimates of detection probability are needed. We provide recommendations that would help improve future marsh bird survey efforts and a list of 14 priority information and research needs that represent gaps in our current knowledge where future resources are best directed. ?? Society of Wetland Scientists 2011.

In situ burning of oil in coastal marshes. 1. Vegetation recovery and soil temperature as a function of water depth, oil type, and marsh type.

Science.gov (United States)

Lin, Qianxin; Mendelssohn, Irving A; Bryner, Nelson P; Walton, William D

2005-03-15

In-situ burning of oiled wetlands potentially provides a cleanup technique that is generally consistent with present wetland management procedures. The effects of water depth (+10, +2, and -2 cm), oil type (crude and diesel), and oil penetration of sediment before the burn on the relationship between vegetation recovery and soil temperature for three coastal marsh types were investigated. The water depth over the soil surface during in-situ burning was a key factor controlling marsh plant recovery. Both the 10- and 2-cm water depths were sufficient to protect marsh vegetation from burning impacts, with surface soil temperatures of fire significantly impeded the post-burn recovery of Spartina alterniflora and Sagittaria lancifolia but did not detrimentally affect the recovery of Spartina patens and Distichlis spicata. Oil type (crude vs diesel) and oil applied to the marsh soil surface (0.5 L x m(-2)) before the burn did not significantly affect plant recovery. Thus, recovery is species-specific when no surface water exists. Even water at the soil surface will most likely protect wetland plants from burning impact.

DENITRIFICATION ENZYME ACTIVITY OF FRINGE SALT MARSHES IN NEW ENGLAND (USA)

Science.gov (United States)

Coastal salt marshes are a buffer between the uplands and adjacent coastal waters in New England (USA). With increasing N loads from developed watersheds, salt marshes could play an important role in the water quality maintenance of coastal waters. In this study we examined seaso...

The structure of salt marsh soil mesofauna food webs - The prevalence of disturbance.

Science.gov (United States)

Haynert, Kristin; Kiggen, Mirijam; Klarner, Bernhard; Maraun, Mark; Scheu, Stefan

2017-01-01

Mesofauna taxa fill key trophic positions in soil food webs, even in terrestrial-marine boundary habitats characterized by frequent natural disturbances. Salt marshes represent such boundary habitats, characterized by frequent inundations increasing from the terrestrial upper to the marine pioneer zone. Despite the high abundance of soil mesofauna in salt marshes and their important function by facilitating energy and carbon flows, the structure, trophic ecology and habitat-related diet shifts of mesofauna species in natural salt marsh habitats is virtually unknown. Therefore, we investigated the effects of natural disturbance (inundation frequency) on community structure, food web complexity and resource use of soil mesofauna using stable isotope analysis (15N, 13C) in three salt marsh zones. In this intertidal habitat, the pioneer zone is exposed to inundations twice a day, but lower and upper salt marshes are less frequently inundated based on shore height. The mesofauna comprised 86 species / taxa dominated by Collembola, Oribatida and Mesostigmata. Shifts in environmental disturbances influenced the structure of food webs, diversity and density declined strongly from the land to the sea pointing to the importance of increasing levels of inundation frequency. Accordingly, the reduced diversity and density was associated by a simplification of the food web in the pioneer zone as compared to the less inundated lower and upper salt marsh with a higher number of trophic levels. Strong variations in δ15N signatures demonstrated that mesofauna species are feeding at multiple trophic levels. Primary decomposers were low and most mesofauna species functioned as secondary decomposers or predators including second order predators or scavengers. The results document that major decomposer taxa, such as Collembola and Oribatida, are more diverse than previously assumed and predominantly dwell on autochthonous resources of the respective salt marsh zone. The results further

Habitat selection, movement patterns, and hazards encountered by northern leopard frogs (Lithobates pipiens) in an agricultural landscape

Science.gov (United States)

Knutson, Melinda G.; Herner-Thogmartin, Jennifer H.; Thogmartin, Wayne E.; Kapfer, Joshua M.; Nelson, John

2018-01-01

Telemetry data for 59 Northern Leopard Frogs (Lithobates pipiens) breeding in ponds in Houston and Winona Counties, MN; 2001-2002. Agricultural intensification is causing declines in many wildlife species, including Northern Leopard Frogs (Lithobates pipiens). Specific information about frog movements, habitat selection, and sources of mortality can be used to inform conservation-focused land management and acquisition. We studied Northern Leopard Frogs in southeastern Minnesota, part of the Driftless Area ecoregion, characterized by hills and valleys and a mix of agriculture, forests, small towns and farmsteads. In this area, small farm ponds, originally built to control soil erosion are used by the species for breeding and wintering in addition to riparian wetlands. But, this agricultural landscape may be hazardous for frogs moving between breeding, feeding, and wintering habitats. We surgically implanted transmitters into the peritoneal cavity of 59 Northern Leopard Frogs and tracked them from May to October 2001-2002. The total distance traveled by radio-tagged frogs ranged from 12 to 3316 m, the 95% home range averaged 5.3 ± 1.2 (SE) ha, and the 50% core area averaged 1.05 ± 0.3 (SE) ha. As expected, Northern Leopard Frogs selected wetlands over all other land cover classes and row crops were generally avoided at all levels of selection. Only a few tracked frogs were successful at dispersing (n = 6). Most frogs attempting to disperse (n =31) ended up missing (n = 14), died due to mowing (n = 8), or were recorded as transmitter failure (n = 2) or unknown mortalities (n = 1). For the conservation of Northern Leopard Frogs in this agricultural setting, we must consider both the aquatic and the terrestrial needs of this species. Conservation agencies that restore, manage, and acquire wetlands should consider the hazards posed by land uses adjacent to frog breeding and wintering sites and plan for movement corridors between these locations. For example

Does vegetation prevent wave erosion of salt marsh edges?

Science.gov (United States)

Feagin, R A; Lozada-Bernard, S M; Ravens, T M; Möller, I; Yeager, K M; Baird, A H

2009-06-23

This study challenges the paradigm that salt marsh plants prevent lateral wave-induced erosion along wetland edges by binding soil with live roots and clarifies the role of vegetation in protecting the coast. In both laboratory flume studies and controlled field experiments, we show that common salt marsh plants do not significantly mitigate the total amount of erosion along a wetland edge. We found that the soil type is the primary variable that influences the lateral erosion rate and although plants do not directly reduce wetland edge erosion, they may do so indirectly via modification of soil parameters. We conclude that coastal vegetation is best-suited to modify and control sedimentary dynamics in response to gradual phenomena like sea-level rise or tidal forces, but is less well-suited to resist punctuated disturbances at the seaward margin of salt marshes, specifically breaking waves.

A frog's-eye view of the landscape : quantifying connectivity for fragmented amphibian populations

NARCIS (Netherlands)

Vos, C.C.

1999-01-01

The spatial habitat requirements are studied for two amphibian species: the tree frog ( Hyla arborea ) and the moor frog ( Rana arvalis ). Fragmentation, the destruction of suitable habitat, results in small fragments that are separated by

Nitrogen processing in a tidal freshwater marsh: a whole ecosystem 15N labeling study

NARCIS (Netherlands)

Gribsholt, B.; Boschker, H.T.S.; Struyf, E.; Andersson, M.G.I.; Tramper, A.; de Brabandere, L.; van Damme, S.; Brion, N.; Meire, P.; Dehairs, F.; Middelburg, J.J.; Heip, C.H.R.

2005-01-01

We quantified the fate and transport of watershed-derived ammonium in a tidal freshwater marsh fringing the nutrientrich Scheldt River in a whole-ecosystem 15N labeling experiment. 15N-NH4+ was added to the floodwater entering a 3,477 14 m2 tidal marsh area, and marsh ammonium processing and

Geomorphic and ecological effects of Hurricanes Katrina and Rita on coastal Louisiana marsh communities

Science.gov (United States)

Piazza, Sarai C.; Steyer, Gregory D.; Cretini, Kari F.; Sasser, Charles E.; Visser, Jenneke M.; Holm, Guerry O.; Sharp, Leigh A.; Evers, D. Elaine; Meriwether, John R.

2011-01-01

Hurricanes Katrina and Rita made landfall in 2005, subjecting the coastal marsh communities of Louisiana to various degrees of exposure. We collected data after the storms at 30 sites within fresh (12), brackish/intermediate (12), and saline (6) marshes to document the effects of saltwater storm surge and sedimentation on marsh community dynamics. The 30 sites were comprised of 15 pairs. Most pairs contained one site where data collection occurred historically (that is, prestorms) and one Coastwide Reference Monitoring System site. Data were collected from spring 2006 to fall 2007 on vegetative species composition, percentage of vegetation cover, aboveground and belowground biomass, and canopy reflectance, along with discrete porewater salinity, hourly surface-water salinity, and water level. Where available, historical data acquired before Hurricanes Katrina and Rita were used to compare conditions and changes in ecological trajectories before and after the hurricanes. Sites experiencing direct and indirect hurricane influences (referred to in this report as levels of influence) were also identified, and the effects of hurricane influence were tested on vegetation and porewater data. Within fresh marshes, porewater salinity was greater in directly impacted areas, and this heightened salinity was reflected in decreased aboveground and belowground biomass and increased cover of disturbance species in the directly impacted sites. At the brackish/intermediate marsh sites, vegetation variables and porewater salinity were similar in directly and indirectly impacted areas, but porewater salinity was higher than expected throughout the study. Interestingly, directly impacted saline marsh sites had lower porewater salinity than indirectly impacted sites, but aboveground biomass was greater at the directly impacted sites. Because of the variable and site-specific nature of hurricane influences, we present case studies to help define postdisturbance baseline conditions in

Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest.

Energy Technology Data Exchange (ETDEWEB)

Horn, Scott; Hanula, James L.; Ulyshen, Michael D.; Kilgo, John C.

2005-01-01

Horn, Scott, James L. Hanula, Michael D. Ulyshen, and John C. Kilgo. 2005. Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest. Am. Midl. Nat. 153:321-326. Abstract: We found more green tree frogs (Hyla cinerea) in canopy gaps than in closed canopy forest. Of the 331 green tree frogs observed, 88% were in canopy gaps. Likewise, higher numbers and biomasses of insects were captured in the open gap habitat. Flies were the most commonly collected insect group accounting for 54% of the total capture. These data suggest that one reason green tree frogs were more abundant in canopy gaps was the increased availability of prey and that small canopy gaps provide early successional habitats that are beneficial to green tree frog populations.

Salt marsh stability and patterns of sedimentation across a backbarrier platform

DEFF Research Database (Denmark)

Bartholdy, Anders; Bartholdy, Jesper; Kroon, Aart

2010-01-01

Long term observations of clay thicknesses from 1949 to 2007 and measurements of the bulk dry density of salt marsh on the backbarrier of Skallingen (west Denmark) formed the basis of constructing a space distributed model of salt marsh deposition. The deposition potential (an empirical constant, ß...

Alternative nitrate reduction pathways in experimentally fertilized New England salt marshes

DEFF Research Database (Denmark)

Uldahl, Anne; Banta, Gary Thomas; Boegh, Eva

the ecosystem in the form of gaseous N2, while the last process transforms of NO3- to another biologically available form, NH4+, and thus merely recycles N. Salt marshes are important ecosystems for the cycling, retention and removal of biologically available N transported from land to the oceans. We used...... ongoing ecosystem level nutrient additions experiments in two New England salt marshes, Plum Island Sound (NO3- additions since 2003) and Great Sippewissett Marsh (fertilizer additions since the 1970's) to examine the relative importance of these NO3- reduction pathways in salt marshes. Sediments from...... several experimental (and unmanipulated) sites were collected during the late summer/fall of 2009 and summer 2010 to measure the potential rates of NO3- reduction in sediment slurries enriched with NO3- and 15NO3- added as a tracer. The resulting 15N-labeled products (30N2, 29N2 and 15NH4+) were analyzed...

Effects of acute exposure to magnetic field on ionic composition of frog sciatic nerve

International Nuclear Information System (INIS)

Salem, A.; Hafedh, A.; Mohsen, S.

2004-01-01

Objective: To evaluate the possible interaction between magnetic field and cadmium on ionic composition of frog sciatic nerve. Design: The combined effect of magnetic field and cadmium (1.5mg/kg; in lymphatic sac) were studied in frog sciatic nerves (Rana Esculenta). Sciatic nerve samples were extracted, weighed and mixed in bidistilled water in order to analyze by inductively coupled plasma (ICP) ionic composition. Setting: Frogs (Rana Esculenta) were reared in swimming-pool (Faculte des Sciences de Bizerte, Tunisia). Frogs were cared for under the Tunisian Code of Practice for the Care and Use of Animals for Scientific purpose and the Experimental Protocols were approved by the Ethics Committee. Subjects: Treated and control groups (n=6) weighing 50-100g at the time of experiments were housed in the same condition three weeks before the beginning of the experiments. Results: Acute exposure to magnetic field increased significantly the calcium (+298%, p<0.05) and iron (+50%, p<0.05) contents of frog sciatic nerve, whereas magnesium and copper contents remained unchanged. The association between magnetic field and cadmium, induced marked increase of calcium (+360%, p<0.05), whereas magnesium content remained stable. Conclusions: Magnetic field exposure alters the ionic composition in the frog sciatic nerve, especially calcium and iron. Magnetic field magnifies the effect of cadmium on calcium homeostasis. (author)

Quantifying Trophic Interactions and Carbon Flow in Louisiana Salt Marshes Using Multiple Biomarkers

Science.gov (United States)

Polito, M. J.; Lopez-Duarte, P. C.; Olin, J.; Johnson, J. J.; Able, K.; Martin, C. W.; Fodrie, J.; Hooper-Bui, L. M.; Taylor, S.; Stouffer, P.; Roberts, B. J.; Rabalais, N. N.; Jensen, O.

2017-12-01

Salt marshes are critical habitats for many species in the northern Gulf of Mexico. However, given their complex nature, quantifying trophic linkages and the flow of carbon through salt marsh food webs is challenging. This gap in our understanding of food web structure and function limits our ability to evaluate the impacts of natural and anthropogenic stressors on salt marsh ecosystems. For example, 2010 Deepwater Horizon (DWH) oil spill had the potential to alter trophic and energy pathways. Even so, our ability to evaluate its effects on Louisiana salt marsh food webs was limited by a poor basis for comparison of the pre-spill baseline food web. To be better equipped to measure significant alterations in salt marsh ecosystems in the future, we quantified trophic interactions at two marsh sites in Barataria Bay, LA in May and October of 2015. Trophic structure and carbon flow across 52 species of saltmarsh primary producers and consumers were examined through a combination of three approaches: bulk tissue stable isotope analysis (δ13C, δ15N, δ34S), dietary fatty acid analysis (FAA), and compound-specific stable isotope analysis of essential amino acids (δ13C EAA). Bulk stable isotope analysis indicated similar trophic diversity between sites and seasons with the use of aquatic resources increasing concomitantly with trophic level. FAA and δ13C EAA biomarkers revealed that marsh organisms were largely divided into two groups: those that primarily derive carbon from terrestrial C4 grasses, and those that predominately derive carbon from a combination of phytoplankton and benthic microalgal sources. Differences in trophic structure and carbon flow were minimal between seasons and sites that were variably impacted by the DWH spill. These data on salt marsh ecosystem structure will be useful to inform future injury assessments and restoration initiatives.

Salt marsh recovery from a crude oil spill: Vegetation, oil weathering, and response

International Nuclear Information System (INIS)

Hoff, R.Z.; Shigenaka, G.; Henry, C.B. Jr.

1993-01-01

When a spill of Prudhoe Bay crude oil covered a fringing Salicornia virginica marsh in Fidalgo Bay, Washington (northern Puget Sound) in February 1991, response personnel used several low-impact techniques to remove oil from the marsh, and minimized access by cleanup workers. Following the response, a monitoring program was established to track marsh recovery, and to document the effectiveness of the response techniques used and their impacts on the marsh. Through monthly sampling over a 16-month period, vegetative growth was monitored and chemical degradation of remaining oil was tracked. Sampling was conducted along transects located in four areas affected in different ways by the spill, including an oiled, trampled section; an oiled, vacuumed section; and an oiled, washed, and vacuumed section. In addition, a control transect was established in an unoiled adjacent marsh. The study included both biological and chemical components. Biological measurements included percent cover of live vegetation (sampled monthly) and below-ground plant biomass (sampled at the beginning of each growing season in April 1991 and April 1992). Sediment samples included surface sediment (monthly) and core samples collected at the beginning and end of the growing seasons. Sediment samples were analyzed using gas chromatography/mass spectroscopy, and indicator compounds were tracked to determine rates of oil degradation. Results from 16 months of post-spill monitoring show that foot trampling was most detrimental to marsh plants, while washing with vacuuming removed the most oil and minimized adverse impacts to vegetation. Dense clay substrate helped prevent oil from penetrating the sediment, thus minimizing acute toxic effects from oil exposure to marsh plant rootstock. By the second growing season post-spill, Salicornia and other marsh plants were growing in all areas except one heavily oiled patch

Factors influencing survival and mark retention in postmetamorphic boreal chorus frogs

Science.gov (United States)

Swanson, Jennifer E; Bailey, Larissa L.; Muths, Erin L.; Funk, W. Chris

2013-01-01

The ability to track individual animals is crucial in many field studies and often requires applying marks to captured individuals. Toe clipping has historically been a standard marking method for wild amphibian populations, but more recent marking methods include visual implant elastomer and photo identification. Unfortunately, few studies have investigated the influence and effectiveness of marking methods for recently metamorphosed individuals and as a result little is known about this life-history phase for most amphibians. Our focus was to explore survival probabilities, mark retention, and mark migration in postmetamorphic Boreal Chorus Frogs (Psuedacris maculata) in a laboratory setting. One hundred forty-seven individuals were assigned randomly to two treatment groups or a control group. Frogs in the first treatment group were marked with visual implant elastomer, while frogs in the second treatment group were toe clipped. Growth and mortality were recorded for one year and resulting data were analyzed using known-fate models in Program MARK. Model selection results suggested that survival probabilities of frogs varied with time and showed some variation among marking treatments. We found that frogs with multiple toes clipped on the same foot had lower survival probabilities than individuals in other treatments, but individuals can be marked by clipping a single toe on two different feet without any mark loss or negative survival effects. Individuals treated with visual implant elastomer had a mark migration rate of 4% and mark loss rate of 6%, and also showed very little negative survival impacts relative to control individuals.

Carbon Dioxide and Methane Emissions from Diverse Zones of a California Salt Marsh

Science.gov (United States)

Wang, F.; King, J. Y.

2016-12-01

With high primary productivity and low organic matter decomposition rates, salt marshes sequester carbon from the atmosphere and contribute to mitigation of climate change. However, the role of wetlands in carbon sequestration is offset by CO2 and CH4 emissions whose magnitudes remain coarsely constrained. To better understand the spatiotemporal dynamics of gaseous carbon fluxes from marsh soils in a Mediterranean climate, we collected air and soil samples over the course of 10 months at Carpinteria Salt Marsh Reserve (CSMR) located in the County of Santa Barbara, California. The CSMR consists of four distinct zones characterized by differences in elevation, tidal regime, and vegetation. Twelve static chambers were deployed among two lower marsh zones, a salt flat, and a marsh-upland transition zone for fortnightly flux measurements from September, 2015 to May, 2016. In August, 2015 and June, 2016, soil cores up to 50 cm deep were extracted near the chambers, segmented by depth, and analyzed for soil moisture, bulk density, EC, pH, organic/inorganic carbon, and total nitrogen content. The gaseous carbon fluxes showed significant spatiotemporal variability, and soil properties differed noticeably by zone and by depth. Integrated over the study period, the marsh-upland transition zone had the highest CO2 fluxes at 292 g C/m2, followed closely by the lower marsh zones (271 g C/m2 and 189 g C/m2), which were one order of magnitude higher than the CO2 fluxes from the salt flat (23 g C/m2). Seasonally, CO2 fluxes were 2.5 to 3.5 times higher during the warmer months (Sept - Oct, Mar - May) than the colder months (Nov - Feb) across all zones. The CH4 fluxes were more temporally heterogeneous, but overall the CH4 emissions from the lower marsh zones (1.37 g C/m2 and 0.41 g C/m2) surpassed those from the salt flat (0.054 g C/m2) by an order of magnitude, and the marsh-upland transition zone was a net methane sink (-0.029 g C/m2). Our results show that soil gaseous carbon

Gulf-Wide Information System, Environmental Sensitivity Index Marsh, Geographic NAD83, LDWF (2001) [esi_fresh_marsh_LDWF_2001

Data.gov (United States)

Louisiana Geographic Information Center — This data set contains Environmental Sensitivity Index (ESI) fresh marsh data of coastal Louisiana. The ESI is a classification and ranking system, which...

An Analysis of Predator Selection to Affect Aposematic Coloration in a Poison Frog Species.

Science.gov (United States)

Dreher, Corinna E; Cummings, Molly E; Pröhl, Heike

2015-01-01

Natural selection is widely noted to drive divergence of phenotypic traits. Predation pressure can facilitate morphological divergence, for example the evolution of both cryptic and conspicuous coloration in animals. In this context Dendrobatid frogs have been used to study evolutionary forces inducing diversity in protective coloration. The polytypic strawberry poison frog (Oophaga pumilio) shows strong divergence in aposematic coloration among populations. To investigate whether predation pressure is important for color divergence among populations of O. pumilio we selected four mainland populations and two island populations from Costa Rica and Panama. Spectrometric measurements of body coloration were used to calculate color and brightness contrasts of frogs as an indicator of conspicuousness for the visual systems of several potential predators (avian, crab and snake) and a conspecific observer. Additionally, we conducted experiments using clay model frogs of different coloration to investigate whether the local coloration of frogs is better protected than non-local color morphs, and if predator communities vary among populations. Overall predation risk differed strongly among populations and interestingly was higher on the two island populations. Imprints on clay models indicated that birds are the main predators while attacks of other predators were rare. Furthermore, clay models of local coloration were equally likely to be attacked as those of non-local coloration. Overall conspicuousness (and brightness contrast) of local frogs was positively correlated with attack rates by birds across populations. Together with results from earlier studies we conclude that conspicuousness honestly indicates toxicity to avian predators. The different coloration patterns among populations of strawberry poison frogs in combination with behavior and toxicity might integrate into equally efficient anti-predator strategies depending on local predation and other ecological

Rates and probable causes of freshwater tidal marsh failure, Potomac River Estuary, Northern Virginia, USA

Science.gov (United States)

Litwin, Ronald J.; Smoot, Joseph P.; Pavich, Milan J.; Markewich, Helaine Walsh; Oberg, Erik T.; Steury, Brent W.; Helwig, Ben; Santucci, Vincent L.; Sanders, Geoffrey

2013-01-01

Dyke Marsh, a distal tidal marsh along the Potomac River estuary, is diminishing rapidly in areal extent. This study documents Dyke Marsh erosion rates from the early-1860s to the present during pre-mining, mining, and post-mining phases. From the late-1930s to the mid-1970s, Dyke Marsh and the adjacent shallow riverbottom were mined for gravel, resulting in a ~55 % initial loss of area. Marsh loss continued during the post-mining phase (1976–2012). Causes of post-mining loss were unknown, but were thought to include Potomac River flooding. Post-mining areal-erosion rates increased from 0.138 ha yr−1 (~0.37 ac yr−1) to 0.516 ha yr−1(~1.67 ac yr−1), and shoreline-erosion rates increased from 0.76 m yr−1 (~2.5 ft yr−1) to 2.60 m yr−1 (~8.5 ft yr−1). Results suggest the accelerating post-mining erosion reflects a process-driven feedback loop, enabled by the marsh's severely-altered geomorphic and hydrologic baseline system; the primary post-mining degradation process is wave-induced erosion from northbound cyclonic storms. Dyke Marsh erosion rates are now comparable to, or exceed, rates for proximal coastal marshes in the same region. Persistent and accelerated erosion of marshland long after cessation of mining illustrates the long-term, and potentially devastating, effects that temporally-restricted, anthropogenic destabilization can have on estuarine marsh systems.

Contribution of Cultural Eutrophication to Marsh Loss in Jamaica Bay (NY)

Science.gov (United States)

Loss of salt marsh area in the Jamaica Bay Estuary (NY) has accelerated in recent years, with loss rates as high as 45 acres per year. A contributing factor to this acceleration is likely cultural eutrophication due to over 6 decades of sewage effluent inputs. We examined marsh...

Biodiversity of frog haemoparasites from sub-tropical northern KwaZulu-Natal, South Africa

Science.gov (United States)

Netherlands, Edward C.; Cook, Courtney A.; Kruger, Donnavan J.D.; du Preez, Louis H.; Smit, Nico J.

2015-01-01

Since South Africa boasts a high biodiversity of frog species, a multispecies haemoparasite survey was conducted by screening the blood from 29 species and 436 individual frogs. Frogs were collected at three localities in sub-tropical KwaZulu-Natal, a hotspot for frog diversity. Twenty per cent of the frogs were infected with at least one of five groups of parasites recorded. Intraerythrocytic parasites comprising Hepatozoon, Dactylosoma, and viral or bacterial organisms, as well as extracellular parasites including trypanosomes and microfilarid nematodes were found. A significant difference (P Hepatozoon and Trypanosoma species accounted for most of the infections, the former demonstrating significant differences in intensity of infection across species, families and habitat types (P = 0.028; P = 0.006; P = 0.007 respectively). Per locality, the first, the formally protected Ndumo Game Reserve, had the highest biodiversity of haemoparasite infections, with all five groups of parasites recorded. The other two sites, that is the area bordering the reserve and the Kwa Nyamazane Conservancy, had a lower diversity with no parasite infections recorded and only Hepatozoon species recorded respectively. Such findings could be ascribed to the anthropogenic impact on the latter two sites, the first by the rural village activities, and the second by the bordering commercial sugar cane agriculture. Future studies should include both morphological and molecular descriptions of the above parasites, as well as the identification of potential vectors, possibly clarifying the effects human activities may have on frog haemoparasite life cycles and as such their biodiversity. PMID:25830113

Diversity within diversity: Parasite species richness in poison frogs assessed by transcriptomics.

Science.gov (United States)

Santos, Juan C; Tarvin, Rebecca D; O'Connell, Lauren A; Blackburn, David C; Coloma, Luis A

2018-08-01

Symbionts (e.g., endoparasites and commensals) play an integral role in their host's ecology, yet in many cases their diversity is likely underestimated. Although endoparasites are traditionally characterized using morphology, sequences of conserved genes, and shotgun metagenomics, host transcriptomes constitute an underused resource to identify these organisms' diversity. By isolating non-host transcripts from host transcriptomes, individual host tissues can now simultaneously reveal their endoparasite species richness (i.e., number of different taxa) and provide insights into parasite gene expression. These approaches can be used in host taxa whose endoparasites are mostly unknown, such as those of tropical amphibians. Here, we focus on the poison frogs (Dendrobatidae) as hosts, which are a Neotropical clade known for their bright coloration and defensive alkaloids. These toxins are an effective protection against vertebrate predators (e.g., snakes and birds), bacteria, and skin-biting ectoparasites (e.g., mosquitoes); however, little is known about their deterrence against eukaryotic endoparasites. With de novo transcriptomes of dendrobatids, we developed a bioinformatics pipeline for endoparasite identification that uses host annotated RNA-seq data and set of a priori parasite taxonomic terms, which are used to mine for specific endoparasites. We found a large community of helminths and protozoans that were mostly restricted to the digestive tract and a few systemic parasites (e.g., Trypanosoma). Contrary to our expectations, all dendrobatid frogs regardless of the presence of alkaloid defenses have endoparasites, with their highest species richness located in the frog digestive tract. Some of these organisms (e.g., roundworms) might prove to be generalists, as they were not found to be co-diversifying with their frog hosts. We propose that endoparasites may escape poison frogs' chemical defenses by colonizing tissues with fewer alkaloids than the frog's skin

Specificity of salt marsh diazotrophs for vegetation zones and plant hosts

Directory of Open Access Journals (Sweden)

Debra Aline Davis

2012-03-01

Full Text Available Salt marshes located on the east coast of temperate North America are highly productive, typically nitrogen-limited, and support diverse assemblages of nitrogen fixing (diazotrophic bacteria. The distributions of these diazotrophs are strongly influenced by plant host and abiotic environmental parameters. Crab Haul Creek Basin, North Inlet, SC, USA is a tidally dominated marsh that displays discrete plant zones distributed along an elevation gradient from the tidal creek bank to the terrestrial forest. These zones are defined by gradients of abiotic environmental variables, particularly salinity and sulfide. DGGE fingerprinting and phylogenetic analyses of recovered sequences demonstrated that the distributions of some diazotrophs indicate plant host specificity and that diazotroph assemblages across the marsh gradient are heavily influenced by edaphic conditions. Broadly distributed diazotrophs capable of maintaining populations in all environmental conditions across the gradient are also present in these assemblages. Parsimony test results confirm that diazotroph assemblages in different plant zones are significantly (p<0.01 different across the marsh landscape. Results also indicated that diazotroph assemblages associated with different plant hosts growing in the same area of the marsh were structurally similar confirming the influence of edaphic parameters on these assemblages. Principal Component Analysis of DGGE gel banding patterns confirmed these results. This article reviews and analyzes data from North Inlet Estuary, addressing diazotroph assemblage structure and the influence of plant host and environmental conditions. New data demonstrate the heterogeneity of salt marsh rhizosphere microenvironments, and corroborate previous findings from different plant hosts growing at several locations within this estuary. These data support the hypothesis that the biogeography of microorganisms is non-random and is partially driven by

Discovery of skin alkaloids in a miniaturized eleutherodactylid frog from Cuba.

Science.gov (United States)

Rodríguez, Ariel; Poth, Dennis; Schulz, Stefan; Vences, Miguel

2011-06-23

Four phylogenetically independent lineages of frogs are currently known to sequester lipid-soluble skin alkaloids for which a dietary source has been demonstrated. We report here a remarkable fifth such instance, in Eleutherodactylus iberia and Eleutherodactylus orientalis, two species of miniaturized frogs of the family Eleutherodactylidae from Cuba. Six pumiliotoxins and two indolizidines were found in E. iberia, one of the smallest frogs in the world and characterized by a contrasting colour pattern for which we hypothesize an aposematic function. Analyses of stomach content indicated a numerical prevalence of mites with an important proportion of oribatids-a group of arthropods known to contain one of the pumiliotoxins detected in E. iberia. This suggests that miniaturization and specialization to small prey may have favoured the acquisition of dietary skin alkaloids in these amphibians.

Abundance of Green Tree Frogs and Insects in Artificial Canopy Gaps in a Bottomland Hardwood Forest.

Energy Technology Data Exchange (ETDEWEB)

Horn, Scott; Hanula, James, L.; Ulyshen, Michael D.; Kilgo, John, C.

2005-04-01

ABSTRACT - We found more green tree frogs ( Hyla cinerea) n canopv gaps than in closed canopy forest. Of the 331 green tree frogs observed, 88% were in canopv gaps. Likewise, higher numbers and biomasses of insects were captured in the open gap habitat Flies were the most commonlv collected insect group accounting for 54% of the total capture. These data suggest that one reason green tree frogs were more abundant in canopy gaps was the increased availability of prey and that small canopy gaps provide early successional habitats that are beneficial to green tree frog populations.

Food niche overlap between two sympatric leaf-litter frog species from Central Amazonia

Directory of Open Access Journals (Sweden)

Leandro Talione Sabagh

2012-02-01

Full Text Available We studied the feeding habits and similarities in the diet of two sympatric and syntopic Amazonian frog species, Anomaloglossus stepheni (Aromobatidae and Leptodactylus andreae (Leptodactylidae in a forested area in Central Amazonia. The breadth of the trophic niche of these species was 5.89 and 3.75, respectively, and approximately 85% of their diets were similar. Ants were main food item in the diets of both frog species. The coexistence between these frog species may be facilitated by the significant differences in the size of their mouths. This difference allows them to consume preys items of different sizes.

Trophic shift in young-of-the-year Mugilidae during salt-marsh colonization.

Science.gov (United States)

Lebreton, B; Richard, P; Guillou, G; Blanchard, G F

2013-04-01

This study investigated the trophic shift of young-of-the-year (YOY) thinlip grey mullet Liza ramada and golden grey mullet Liza aurata during their recruitment in a salt marsh located on the European Atlantic Ocean coast. Stable-isotope signatures (δ(13) C and δ(15) N) of the fishes followed a pattern, having enrichments in (13) C and (15) N with increasing fork length (LF ): δ(13) C in fishes  30 mm δ(13) C ranged from -15.8 to -12.7‰, closer to the level in salt-marsh food resources. Large differences between the δ(15) N values of mugilids and those of food sources (6·0‰ on average) showed that YOY are secondary consumers, similar to older individuals, when feeding in the salt marsh. YOY mugilids shift from browsing on pelagic prey to grazing on benthic resources from the salt marsh before reaching 30 mm LF. The results highlight the role of European salt marshes as nurseries for juvenile mugilids. © 2013 The Authors. Journal of Fish Biology © 2013 The Fisheries Society of the British Isles.

Monitoring for bioremediation efficacy: The marrow marsh experience

International Nuclear Information System (INIS)

Nadeau, R.; Singhvi, R.; Ryabik, J.; Lin, Yihua; Syslo, J.

1993-01-01

The US Environmental Protection Agency's Environmental Response Team analyzed samples taken from Marrow Marsh, Galveston Bay, Texas, to assess the efficacy of a bioremediation effort in the marsh following the Apex barges spill on July 28, 1990. Samples from the marsh had been collected over a 96-hour period following the first application of the bioremediation agent and then 25 days after the second application, which occurred 8 days after the first. Results of sample analyses to evaluate changes in the chemical characteristics of spilled oil failed to show evidence of oil degradation during the 96 hours after the initial treatment, but did show evidence of degradation 25 days after the second treatment-although differences between samples from treated and untreated sites were not evident. Because control areas had not been maintained after the second application, contamination by the bioremediation agent of previously untreated (control) areas may have occurred, perhaps negating the possibility of detecting differences between treated and control areas. Better preparedness to implement bioremediation and conduct monitoring might have increased the effectiveness of the monitoring effort

The extraordinary biology and development of marsupial frogs (Hemiphractidae) in comparison with fish, mammals, birds, amphibians and other animals.

Science.gov (United States)

Del Pino, Eugenia M

2018-01-03

The study of oogenesis and early development of frogs belonging to the family Hemiphractidae provide important comparison to the aquatic development of other frogs, such as Xenopus laevis, because reproduction on land characterizes the Hemiphractidae. In this review, the multinucleated oogenesis of the marsupial frog Flectonotus pygmaeus (Hemiphractidae) is analyzed and interpreted. In addition, the adaptations associated with the incubation of embryos in the pouch of the female marsupial frog Gastrotheca riobambae (Hemiphractidae) and the embryonic development of this frog are summarized. Moreover, G. riobambae gastrulation is compared with the gastrulation modes of Engystomops randi and Engystomops coloradorum (Leptodactylidae); Ceratophrys stolzmanni (Ceratophryidae); Hyalinobatrachium fleischmanni and Espadarana callistomma (Centrolenidae); Ameerega bilinguis, Dendrobates auratus, Epipedobates anthonyi, Epipedobates machalilla, Epipedobates tricolor, and Hyloxalus vertebralis (Dendrobatidae); Eleutherodactylus coqui (Terrarana: Eleutherodactylidae), and X. laevis (Pipidae). The comparison indicated two modes of frog gastrulation. In X. laevis and in frogs with aquatic reproduction, convergent extension begins during gastrulation. In contrast, convergent extension occurs in the post-gastrula of frogs with terrestrial reproduction. These two modes of gastrulation resemble the transitions toward meroblastic cleavage found in ray-finned fishes (Actinopterygii). In spite of this difference, the genes that guide early development seem to be highly conserved in frogs. I conclude that the shift of convergent extension to the post-gastrula accompanied the diversification of frog egg size and terrestrial reproductive modes. Copyright © 2018 Elsevier B.V. All rights reserved.

Effects of bryophytes on succession from alkaline marsh to Sphagnum bog

Energy Technology Data Exchange (ETDEWEB)

Glime, J.M.; Wetzel, R.G.; Kennedy, B.J.

1982-10-01

The alkaline eastern marsh of Lawrence Lake, a marl lake in southwestern Michigan, was sampled by randomly placed line transects to determine the bryophyte cover and corresponding vascular plant zones. Cluster analysis indicated three distinct bryophyte zones which correspond with the recognized vascular plant zones. Mosses occupied over 50% of the surface in some areas. Invasion of Sphagnum, vertical zonation of the mosses on hummocks, zonation with distance from the lake, the abundance of non-Sphagnum moss hummocks, and the ability of the non-Sphagnum species to lower the pH of marsh water during laboratory incubations are evidence that non-Sphagnum mosses facilitate succession from alkaline marsh to Sphagnum bog.

Research on moving object detection based on frog's eyes

Science.gov (United States)

Fu, Hongwei; Li, Dongguang; Zhang, Xinyuan

2008-12-01

On the basis of object's information processing mechanism with frog's eyes, this paper discussed a bionic detection technology which suitable for object's information processing based on frog's vision. First, the bionics detection theory by imitating frog vision is established, it is an parallel processing mechanism which including pick-up and pretreatment of object's information, parallel separating of digital image, parallel processing, and information synthesis. The computer vision detection system is described to detect moving objects which has special color, special shape, the experiment indicates that it can scheme out the detecting result in the certain interfered background can be detected. A moving objects detection electro-model by imitating biologic vision based on frog's eyes is established, the video simulative signal is digital firstly in this system, then the digital signal is parallel separated by FPGA. IN the parallel processing, the video information can be caught, processed and displayed in the same time, the information fusion is taken by DSP HPI ports, in order to transmit the data which processed by DSP. This system can watch the bigger visual field and get higher image resolution than ordinary monitor systems. In summary, simulative experiments for edge detection of moving object with canny algorithm based on this system indicate that this system can detect the edge of moving objects in real time, the feasibility of bionic model was fully demonstrated in the engineering system, and it laid a solid foundation for the future study of detection technology by imitating biologic vision.

Of volcanoes, saints, trash, and frogs

DEFF Research Database (Denmark)

Andersen, Astrid Oberborbeck

, at the same time as political elections and economic hardship. During one year of ethnographic fieldwork volcanoes, saints, trash and frogs were among the nonhuman entities referred to in conversations and engaged with when responding to the changes that trouble the world and everyday life of Arequipans...

Effects of Extreme Events on Arsenic Cycling in Salt Marshes

Science.gov (United States)

Northrup, Kristy; Capooci, Margaret; Seyfferth, Angelia L.

2018-03-01

Extreme events such as storm surges, intense precipitation, and supermoons cause anomalous and large fluctuations in water level in tidal salt marshes, which impacts the sediment biogeochemistry that dictates arsenic (As) cycling. In addition to changes in water level, which impacts soil redox potential, these extreme events may also change salinity due to freshwater inputs from precipitation or saltwater inputs due to surge. It is currently unknown how As mobility in tidal salt marshes will be impacted by extreme events, as fluctuations in salinity and redox potential may act synergistically to mobilize As. To investigate impacts of extreme events on As cycling in tidal salt marshes, we conducted a combined laboratory and field investigation. We monitored pore water and soil samples before, during, and after two extreme events: a supermoon lunar eclipse followed by a storm surge and precipitation induced by Hurricane Joaquin in fall 2015 at the St. Jones Reserve in Dover, Delaware, a representative tidal salt marsh in the Mid-Atlantic United States. We also conducted soil incubations of marsh sediments in batch and in flow-through experiments in which redox potential and/or salinity were manipulated. Field investigations showed that pore water As was inversely proportional to redox potential. During the extreme events, a distinct pulse of As was observed in the pore water with maximum salinity. Combined field and laboratory investigations revealed that this As pulse is likely due to rapid changes in salinity. These results have implications for As mobility in the face of extreme weather variability.

An Analysis of Predator Selection to Affect Aposematic Coloration in a Poison Frog Species.

Directory of Open Access Journals (Sweden)

Corinna E Dreher

Full Text Available Natural selection is widely noted to drive divergence of phenotypic traits. Predation pressure can facilitate morphological divergence, for example the evolution of both cryptic and conspicuous coloration in animals. In this context Dendrobatid frogs have been used to study evolutionary forces inducing diversity in protective coloration. The polytypic strawberry poison frog (Oophaga pumilio shows strong divergence in aposematic coloration among populations. To investigate whether predation pressure is important for color divergence among populations of O. pumilio we selected four mainland populations and two island populations from Costa Rica and Panama. Spectrometric measurements of body coloration were used to calculate color and brightness contrasts of frogs as an indicator of conspicuousness for the visual systems of several potential predators (avian, crab and snake and a conspecific observer. Additionally, we conducted experiments using clay model frogs of different coloration to investigate whether the local coloration of frogs is better protected than non-local color morphs, and if predator communities vary among populations. Overall predation risk differed strongly among populations and interestingly was higher on the two island populations. Imprints on clay models indicated that birds are the main predators while attacks of other predators were rare. Furthermore, clay models of local coloration were equally likely to be attacked as those of non-local coloration. Overall conspicuousness (and brightness contrast of local frogs was positively correlated with attack rates by birds across populations. Together with results from earlier studies we conclude that conspicuousness honestly indicates toxicity to avian predators. The different coloration patterns among populations of strawberry poison frogs in combination with behavior and toxicity might integrate into equally efficient anti-predator strategies depending on local predation and

Below the disappearing marshes of an urban estuary: historic nitrogen trends and soil structure

Science.gov (United States)

Wigand, Cathleen; Roman, Charles T.; Davey, Earl; Stolt, Mark; Johnson, Roxanne; Hanson, Alana; Watson, Elizabeth B.; Moran, S. Bradley; Cahoon, Donald R.; Lynch, James C.; Rafferty, Patricia

2014-01-01

Marshes in the urban Jamaica Bay Estuary, New York, USA are disappearing at an average rate of 13 ha/yr, and multiple stressors (e.g., wastewater inputs, dredging activities, groundwater removal, and global warming) may be contributing to marsh losses. Among these stressors, wastewater nutrients are suspected to be an important contributing cause of marsh deterioration. We used census data, radiometric dating, stable nitrogen isotopes, and soil surveys to examine the temporal relationships between human population growth and soil nitrogen; and we evaluated soil structure with computer-aided tomography, surface elevation and sediment accretion trends, carbon dioxide emissions, and soil shear strength to examine differences among disappearing (Black Bank and Big Egg) and stable marshes (JoCo). Radiometric dating and nitrogen isotope analyses suggested a rapid increase in human wastewater nutrients beginning in the late 1840s, and a tapering off beginning in the 1930s when wastewater treatment plants (WWTPs) were first installed. Current WWTPs nutrient loads to Jamaica Bay are approximately 13 995 kg N/d and 2767 kg P/d. At Black Bank, the biomass and abundance of roots and rhizomes and percentage of organic matter on soil were significantly lower, rhizomes larger in diameter, carbon dioxide emission rates and peat particle density significantly greater, and soil strength significantly lower compared to the stable JoCo Marsh, suggesting Black Bank has elevated decomposition rates, more decomposed peat, and highly waterlogged peat. Despite these differences, the rates of accretion and surface elevation change were similar for both marshes, and the rates of elevation change approximated the long term relative rate of sea level rise estimated from tide gauge data at nearby Sandy Hook, New Jersey. We hypothesize that Black Bank marsh kept pace with sea level rise by the accretion of material on the marsh surface, and the maintenance of soil volume through production of

Modified Marsh Classification of the Duodenal Biopsies of a Large Database Covering 10 Years

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Cansu Abayli

2014-02-01

Full Text Available Purpose: Celiac is an autoimmune disease caused by of gluten proteins which can be found in multi-grain food like wheat, barley and oat. The disease affects more than 1% of population and characterized by intestinal inflammation. In celiac disease, mucosal damage is a dynamic process. It is shown that it has autoimmune components. It is also T-Cell mediated and can be categorised as a chronic inflammatory disease. The purpose of this study is to make modified Marsh classification of the duodenal biopsies that came to our department in the 10 years. The study deals with reassessment of all events and uncovering the low graded events that were not diagnosed. Material and Methods: 467 biopsies (diagnosed between 2001 and 2011 at the Cukurova University, Faculty of Medicine, Department of Pathology were taken and analyzed by two pathologists. Each sample was reevaluated without taking the previous reports into consideration and scored by using modified Marsh classification. Results: According to Modified Marsh Classification total of 48 cases were diagnosed as Type 1. Total of 6 cases according to Modified Marsh Classification was diagnosed as Type 2. Total of 11 cases according to Modified Marsh Classification was diagnosed as Type 3a. Total of 5 cases, according to Modified Marsh Classification, was diagnosed as Type 3b. Total of 6 cases according to Modified Marsh Classification was diagnosed as Type 3c. Conclusion: As a result of this study, it has been found that Modified Marsh Classification is a very important standardization tool for detection of suspicious duodenal biopsies and for early case examinations.

The Role of Tidal Marsh Restoration in Fish Management in the San Francisco Estuary

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Bruce Herbold

2014-03-01

Full Text Available   Tidal marsh restoration is an important management issue in the San Francisco Estuary (estuary. Restoration of large areas of tidal marsh is ongoing or planned in the lower estuary (up to 6,000 ha, Callaway et al. 2011. Large areas are proposed for restoration in the upper estuary under the Endangered Species Act biological opinions (3,237 ha and the Bay Delta Conservation Plan (26,305 ha. In the lower estuary, tidal marsh has proven its value to a wide array of species that live within it (Palaima 2012. In the Sacramento–San Joaquin Delta (Delta, one important function ascribed to restoration of freshwater tidal marshes is that they make large contributions to the food web of fish in open waters (BDCP 2013. The Ecosystem Restoration Program ascribed a suite of ecological functions to tidal marsh restoration, including habitat and food web benefits to native fish (CDFW 2010. This background was the basis for a symposium, Tidal Marshes and Native Fishes in the Delta: Will Restoration Make a Difference? held at the University of California, Davis, on June 10, 2013. This paper summarizes conclusions the authors drew from the symposium. 

Refractory organic matter in coastal salt marshes-effect on C sequestration calculations.

Science.gov (United States)

Leorri, Eduardo; Zimmerman, Andrew R; Mitra, Siddhartha; Christian, Robert R; Fatela, Francisco; Mallinson, David J

2018-08-15

The age and ability of salt marshes to accumulate and sequester carbon is often assessed using the carbon isotopic signatures (Δ 14 C and δ 13 C) of sedimentary organic matter. However, transfers of allochthonous refractory carbon (C RF ) from the watershed to marshes would not represent new C sequestration. To better understand how refractory carbon (C RF ) inputs affect assessments of marsh age and C sequestration, Δ 14 C and δ 13 C of both total organic carbon (TOC), C RF , and non-C RF organic matter fractions were measured in salt marshes from four contrasting systems on the North Atlantic coast. To our knowledge, no salt marsh sediment study has considered refractory or allochthonous carbon in carbon budget calculations or the impact on chronologies. Stable and radiogenic isotope data suggest that while TOC was dominated by autochthonous plant inputs, C RF was dominated by locally recycled or allochthonous C, the delivery of which was controlled by the size and slope of each watershed. Steep-gradient rivers analyzed delivered Δ 14 C-depleted C RF to their estuarine marshes, while the site located in the low-gradient river was associated with larger C RF content. Finally, the marsh isolated from riverine input contained the least fraction of TOC as C RF . Laterally transported C RF caused only a small offset in Δ 14 C in relation to TOC in low-gradient systems (average Δ 14 C offset was -44.4 and -24.2‰ at each location). However, the presence of allochthonous Δ 14 C-depleted C RF in sediments of steep-gradient rivers led to large overestimates of the time of organic matter deposition (i.e. apparent age was older than the 'true' time of deposition) (Δ 14 C offset ranged from -170.6 to -528.9‰). Further, reliance on TOC or loss on ignition analyses to calculate C sequestration by marshes might produce overestimates of at least as much as 10 to 20% since neither account for the lateral transport of allochthonous carbon. Copyright © 2018 Elsevier B

Import and export fluxes of macrozooplankton are taxa- and season-dependent at Jiuduansha marsh, Yangtze River estuary

Science.gov (United States)

Qin, Haiming; Sheng, Qiang; Chu, Tianjiang; Wang, Sikai; Wu, Jihua

2015-09-01

Macrozooplankton may play important roles in influencing nutrient exchange between salt marsh and nearby estuarine ecosystems through predator-prey interactions and their transport by tidal flows. In this study, macrozooplankton transport through year-round monthly sampling was investigated in a salt marsh creek of the Yangtze River estuary. Twenty-one orders of macrozooplankton were captured. Calanoida and Decapoda were dominant and numerically comprised 59.59% and 37.59% respectively of the total captured macrozooplankton throughout the year. Decapoda mainly occurred in April, May and June. In other months, the Calanoida contributed over 90% of the total individuals. The annual Ferrari index (I) for total individual number of macrozooplankton was 0.27, which generally supports the viewpoint that salt marshes are sources of zooplankton. The salt marsh was mainly a source for decapods and mysids, possibly because of larval release in their breeding seasons. The marsh was also a source for amphipods, probably because some benthic forms became transient planktonic forms during tidal water flushing. Copepods and fish larvae exhibited net import into the salt marsh, which may result from predation from salt marsh settlers or retention in the salt marsh. Monthly Ferrari index (I) estimations revealed that the role of the salt marsh as a sink or source of macrozooplankton was time-dependent, which is related to the life history of animals. This study showed that whether the salt marsh zooplankton act as energy importers or exporters is group/taxa-dependent and time-dependent.

Effects of changing climate on aquatic habitat and connectivity for remnant populations of a wide-ranging frog species in an arid landscape.

Science.gov (United States)

Pilliod, David S; Arkle, Robert S; Robertson, Jeanne M; Murphy, Melanie A; Funk, W Chris

2015-09-01

Amphibian species persisting in isolated streams and wetlands in desert environments can be susceptible to low connectivity, genetic isolation, and climate changes. We evaluated the past (1900-1930), recent (1981-2010), and future (2071-2100) climate suitability of the arid Great Basin (USA) for the Columbia spotted frog (Rana luteiventris) and assessed whether changes in surface water may affect connectivity for remaining populations. We developed a predictive model of current climate suitability and used it to predict the historic and future distribution of suitable climates. We then modeled changes in surface water availability at each time period. Finally, we quantified connectivity among existing populations on the basis of hydrology and correlated it with interpopulation genetic distance. We found that the area of the Great Basin with suitable climate conditions has declined by approximately 49% over the last century and will likely continue to decline under future climate scenarios. Climate conditions at currently occupied locations have been relatively stable over the last century, which may explain persistence at these sites. However, future climates at these currently occupied locations are predicted to become warmer throughout the year and drier during the frog's activity period (May - September). Fall and winter precipitation may increase, but as rain instead of snow. Earlier runoff and lower summer base flows may reduce connectivity between neighboring populations, which is already limited. Many of these changes could have negative effects on remaining populations over the next 50-80 years, but milder winters, longer growing seasons, and wetter falls might positively affect survival and dispersal. Collectively, however, seasonal shifts in temperature, precipitation, and stream flow patterns could reduce habitat suitability and connectivity for frogs and possibly other aquatic species inhabiting streams in this arid region.

Effects of changing climate on aquatic habitat and connectivity for remnant populations of a wide-ranging frog species in an arid landscape

Science.gov (United States)

Pilliod, David S.; Arkle, Robert S.; Robertson, Jeanne M; Murphy, Melanie; Funk, W. Chris

2015-01-01

Amphibian species persisting in isolated streams and wetlands in desert environments can be susceptible to low connectivity, genetic isolation, and climate changes. We evaluated the past (1900–1930), recent (1981–2010), and future (2071–2100) climate suitability of the arid Great Basin (USA) for the Columbia spotted frog (Rana luteiventris) and assessed whether changes in surface water may affect connectivity for remaining populations. We developed a predictive model of current climate suitability and used it to predict the historic and future distribution of suitable climates. We then modeled changes in surface water availability at each time period. Finally, we quantified connectivity among existing populations on the basis of hydrology and correlated it with interpopulation genetic distance. We found that the area of the Great Basin with suitable climate conditions has declined by approximately 49% over the last century and will likely continue to decline under future climate scenarios. Climate conditions at currently occupied locations have been relatively stable over the last century, which may explain persistence at these sites. However, future climates at these currently occupied locations are predicted to become warmer throughout the year and drier during the frog's activity period (May – September). Fall and winter precipitation may increase, but as rain instead of snow. Earlier runoff and lower summer base flows may reduce connectivity between neighboring populations, which is already limited. Many of these changes could have negative effects on remaining populations over the next 50–80 years, but milder winters, longer growing seasons, and wetter falls might positively affect survival and dispersal. Collectively, however, seasonal shifts in temperature, precipitation, and stream flow patterns could reduce habitat suitability and connectivity for frogs and possibly other aquatic species inhabiting streams in this arid region.

Origins of mineral matter in peat marsh and peat bog deposits, Spain

Energy Technology Data Exchange (ETDEWEB)

Lopez-Buendia, A.M. [Unidad Tecnica del Marmol, AIDICO, Cami de Castella, 4, 03660 Novelda, Alicante (Spain); Whateley, M.K.G. [Rio Tinto Technical Services, Castlemead, Lower Castlemead, BS99 7YR Bristol (United Kingdom); Bastida, J.; Urquiola, M.M. [Dpto. Geologia, Univ. Valencia, Dr. Moliner 50. 46100 Burjasot, Valencia (Spain)

2007-07-02

The mineralogy of three back-barrier peat marshes (Torreblanca, Benicasim and Moncofar marshes) from Eastern Spain and one peat bog (Orihuela del Tremedal bog) from central east Spain have been investigated, using X-ray diffraction (XRD) and scanning electronic microscope (SEM) techniques. A combination of XRD methods was used to quantify the mineralogy of dried bulk peat samples. The water source in the peat marshes is both continental and marine. Water is highly mineralised. Water flow is both low and slow (accumulative system). The water source in the peat bog is continental, draining from the hill. The higher concentration of ions in the water of the back-barrier peat marshes leads to a higher concentration of authigenic minerals in the peat marshes compared to the peat bog. Three main mineral origins have been recognized, namely: detrital, syngenetic-epigenetic and biogenic. The more important contribution comes from the detrital system. Biogenic and bio-influenced minerals are the main non-detrital minerals in the peatlands. This paper discusses the biogenic origin of halite (and other minor halides and sulphates, such as, sylvite, carnalite, epsomite, glauberite, mirabilite and anhydrite?) from halophytic plants, as well as amorphous silica (opal-A) from sponge spicules and phytoliths of several plants. Pyrite in the peat bog has both syngenetic and epigenetic origins from plant decomposition and sulphur release. In the peat marsh the pyrite has a syngenetic origin from sulphate reduction (S{sub sulphate} {yields} S{sub pyritic}), and an epigenetic origin in the older peat, from plant decomposition (S{sub organic} {yields} S{sub pyritic}). (author)

Gulf-Wide Information System, Environmental Sensitivity Index Brackish Marsh, Geographic NAD83, LDWF (2001) [esi_brackish_marsh_LDWF_2001

Data.gov (United States)

Louisiana Geographic Information Center — This data set contains Environmental Sensitivity Index (ESI) brackish marshes data of coastal Louisiana. The ESI is a classification and ranking system, which...

Gulf-Wide Information System, Environmental Sensitivity Index Intermediate Marsh, Geographic NAD83, LDWF (2001) [esi_intermediate_marsh_LDWF_2001

Data.gov (United States)

Louisiana Geographic Information Center — This data set contains Environmental Sensitivity Index (ESI) intermediate marshes data of coastal Louisiana. The ESI is a classification and ranking system, which...

Sources and distribution of sedimentary organic matter along the Andong salt marsh, Hangzhou Bay

Science.gov (United States)

Yuan, Hong-Wei; Chen, Jian-Fang; Ye, Ying; Lou, Zhang-Hua; Jin, Ai-Min; Chen, Xue-Gang; Jiang, Zong-Pei; Lin, Yu-Shih; Chen, Chen-Tung Arthur; Loh, Pei Sun

2017-10-01

Lignin oxidation products, δ13C values, C/N ratios and particle size were used to investigate the sources, distribution and chemical stability of sedimentary organic matter (OM) along the Andong salt marsh located in the southwestern end of Hangzhou Bay, China. Terrestrial OM was highest at the upper marshes and decreased closer to the sea, and the distribution of sedimentary total organic carbon (TOC) was influenced mostly by particle size. Terrestrial OM with a C3 signature was the predominant source of sedimentary OM in the Spartina alterniflora-dominated salt marsh system. This means that aside from contributions from the local marsh plants, the Andong salt marsh received input mostly from the Qiantang River and the Changjiang Estuary. Transect C, which was situated nearer to the Qiantang River mouth, was most likely influenced by input from the Qiantang River. Likewise, a nearby creek could be transporting materials from Hangzhou Bay into Transect A (farther east than Transect C), as Transect A showed a signal resembling that of the Changjiang Estuary. The predominance of terrestrial OM in the Andong salt marsh despite overall reductions in sedimentary and terrestrial OM input from the rivers is most likely due to increased contributions of sedimentary and terrestrial OM from erosion. This study shows that lower salt marsh accretion due to the presence of reservoirs upstream may be counterbalanced by increased erosion from the surrounding coastal areas.

Impact of Coastal Development and Marsh Width Variability on Groundwater Quality in Estuarine Tidal Creeks

Science.gov (United States)

Shanahan, M.; Wilson, A. M.; Smith, E. M.

2017-12-01

Coastal upland development has been shown to negatively impact surface water quality in tidal creeks in the southeastern US, but less is known about its impact on groundwater. We sampled groundwater in the upland and along the marsh perimeter of tidal creeks located within developed and undeveloped watersheds. Samples were analyzed for salinity, dissolved organic carbon, nitrogen and phosphorus concentrations. Groundwater samples collected from the upland in developed and undeveloped watersheds were compared to study the impact of development on groundwater entering the marsh. Groundwater samples collected along the marsh perimeter were analyzed to study the impact of marsh width variability on groundwater quality within each creek. Preliminary results suggest a positive correlation between salinity and marsh width in undeveloped watersheds, and a higher concentration of nutrients in developed versus undeveloped watersheds.

Frog: Asynchronous Graph Processing on GPU with Hybrid Coloring Model

Energy Technology Data Exchange (ETDEWEB)

Shi, Xuanhua; Luo, Xuan; Liang, Junling; Zhao, Peng; Di, Sheng; He, Bingsheng; Jin, Hai

2018-01-01

GPUs have been increasingly used to accelerate graph processing for complicated computational problems regarding graph theory. Many parallel graph algorithms adopt the asynchronous computing model to accelerate the iterative convergence. Unfortunately, the consistent asynchronous computing requires locking or atomic operations, leading to significant penalties/overheads when implemented on GPUs. As such, coloring algorithm is adopted to separate the vertices with potential updating conflicts, guaranteeing the consistency/correctness of the parallel processing. Common coloring algorithms, however, may suffer from low parallelism because of a large number of colors generally required for processing a large-scale graph with billions of vertices. We propose a light-weight asynchronous processing framework called Frog with a preprocessing/hybrid coloring model. The fundamental idea is based on Pareto principle (or 80-20 rule) about coloring algorithms as we observed through masses of realworld graph coloring cases. We find that a majority of vertices (about 80%) are colored with only a few colors, such that they can be read and updated in a very high degree of parallelism without violating the sequential consistency. Accordingly, our solution separates the processing of the vertices based on the distribution of colors. In this work, we mainly answer three questions: (1) how to partition the vertices in a sparse graph with maximized parallelism, (2) how to process large-scale graphs that cannot fit into GPU memory, and (3) how to reduce the overhead of data transfers on PCIe while processing each partition. We conduct experiments on real-world data (Amazon, DBLP, YouTube, RoadNet-CA, WikiTalk and Twitter) to evaluate our approach and make comparisons with well-known non-preprocessed (such as Totem, Medusa, MapGraph and Gunrock) and preprocessed (Cusha) approaches, by testing four classical algorithms (BFS, PageRank, SSSP and CC). On all the tested applications and

Coastal Marsh Longevity, Ecological Succession, and Organic Carbon Dynamics During Early Holocene Sea-Level Rise

Science.gov (United States)

Vetter, L.; Schreiner, K. M.; Rosenheim, B. E.; Tornqvist, T. E.

2016-02-01

Coastal marsh environments perform essential ecosystem services, including nutrient filtering, soil organic matter storage, and storm surge abatement, yet much is still unknown about their formation and fate under periods of sea-level change. During the early Holocene (7-10 ka), rapid sea-level rise in coastal Louisiana was one of the primary controls over marsh development and longevity. Here, we investigate plant community composition and succession and soil organic matter storage in early Holocene coastal marshes in Louisiana using bulk elemental ratios, lignin phenol biomarkers and stable isotopes from peat layers. Sediment cores were collected in southeastern Louisiana and contain a record of an early Holocene transgressive sea-level sequence 16-25 m below present sea-level. The sedimentary record consists of an immature paleosol overlain by basal peat that accumulated in an estuarine marsh, overlain by marine lagoonal muds. A re-established marsh peat is present 1-4 m above the initial transition to marine conditions, indicating a sequence of marsh development, sea-level rise and onset of marine conditions, and then further marsh development as the rate of relative sea-level rise decelerated. Plant community composition in coastal marshes was determined through cupric oxide oxidation and lignin-phenol and non-lignin-phenol biomarker abundances. The degradation state of soil organic matter and the specific source of stabilized organic matter within the sedimentary peats were determined through lignin-phenol biomarker ratios. Organic matter sources ranged from terrestrial to marine over the course of sea-level rise, and different sites showed different amounts of marine organic matter influence and different levels of terrestrial organic matter degradation. These results have important implications for reconstructing the response of coastal marshes and their plant communities to accelerated rates of sea-level rise projected through 2100.

The Effect of Source Suspended Sediment Concentration on the Sediment Dynamics of a Macrotidal Creek and Salt Marsh

Science.gov (United States)

Poirier, E.; van Proosdij, D.; Milligan, T. G.

2017-12-01

Seasonal variability in the sediment dynamics of a Bay of Fundy tidal creek and salt marsh system was analyzed to better understand the ecomorphodynamics of a high suspended sediment concentration intertidal habitat. Data were collected over 62 tides for velocity, suspended sediment concentration, deposition, and grain size at four stations from the creek thalweg to the marsh surface. Five topographic surveys were also conducted throughout the 14-month study. Deposition rates per tide varied spatially from 56.4 g·m-2 at the creek thalweg to 15.3 g·m-2 at the marsh surface. Seasonal variations in deposition in the creek and marsh surface were from 38.0 g·m-2 to 97.7 g·m-2 and from 12.2 g·m-2 to 19.6 g·m-2 respectively. Deposition and erosion were greatest in late fall and winter. This seasonal change, led by higher suspended sediment concentrations, was observed in the creek and at the marsh bank but notably absent from the marsh edge and marsh surface. Sediments were predominantly deposited in floc form (76-83%). Because of high floc content, higher suspended sediment concentrations led to more rapid loss of sediment from suspension. With increasing sediment concentration, deposition increased in the tidal creek and at the marsh bank but not at the marsh edge or marsh surface. This suggests that in highly flocculated environments the water column clears fast enough that very little sediment remains in suspension when the water reaches the marsh and that the sediment concentration during marsh inundation is independent of the initial concentration in the creek.

Water Frogs, Aquariums, and Salmonella -- Oh My!

Centers for Disease Control (CDC) Podcasts

2009-12-09

This CDC Kidtastics podcast discusses how people can get Salmonella from water frogs and aquariums.  Created: 12/9/2009 by National Center for Zoonotic, Vector-Borne, and Enteric Diseases (NCZVED).   Date Released: 12/9/2009.

Early-Life Diet Affects Host Microbiota and Later-Life Defenses Against Parasites in Frogs.

Science.gov (United States)

Knutie, Sarah A; Shea, Lauren A; Kupselaitis, Marinna; Wilkinson, Christina L; Kohl, Kevin D; Rohr, Jason R

2017-10-01

Food resources can affect the health of organisms by altering their symbiotic microbiota and affecting energy reserves for host defenses against parasites. Different diets can vary in their macronutrient content and therefore they might favor certain bacterial communities of the host and affect the development and maintenance of the immune system, such as the inflammatory or antibody responses. Thus, testing the effect of diet, especially for animals with wide diet breadths, on host-associated microbiota and defenses against parasites might be important in determining infection and disease risk. Here, we test whether the early-life diet of Cuban tree frogs (Osteopilus septentrionalis) affects early- and later-life microbiota as well as later-life defenses against skin-penetrating, gut worms (Aplectana hamatospicula). We fed tadpoles two ecologically common diets: a diet of conspecifics or a diet of algae (Arthrospira sp.). We then: (1) characterized the gut microbiota of tadpoles and adults; and (2) challenged adult frogs with parasitic worms and measured host resistance (including the antibody-mediated immune response) and tolerance of infections. Tadpole diet affected bacterial communities in the guts of tadpoles but did not have enduring effects on the bacterial communities of adults. In contrast, tadpole diet had enduring effects on host resistance and tolerance of infections in adult frogs. Frogs that were fed a conspecific-based diet as tadpoles were more resistant to worm penetration compared with frogs that were fed an alga-based diet as tadpoles, but less resistant to worm establishment, which may be related to their suppressed antibody response during worm establishment. Furthermore, frogs that were fed a conspecific-based diet as tadpoles were more tolerant to the effect of parasite abundance on host mass during worm establishment. Overall, our study demonstrates that the diet of Cuban tree frog tadpoles affects the gut microbiota and defenses against

Phylogenomics reveals rapid, simultaneous diversification of three major clades of Gondwanan frogs at the Cretaceous–Paleogene boundary

Science.gov (United States)

Feng, Yan-Jie; Liang, Dan; Hillis, David M.; Cannatella, David C.; Zhang, Peng

2017-01-01

Frogs (Anura) are one of the most diverse groups of vertebrates and comprise nearly 90% of living amphibian species. Their worldwide distribution and diverse biology make them well-suited for assessing fundamental questions in evolution, ecology, and conservation. However, despite their scientific importance, the evolutionary history and tempo of frog diversification remain poorly understood. By using a molecular dataset of unprecedented size, including 88-kb characters from 95 nuclear genes of 156 frog species, in conjunction with 20 fossil-based calibrations, our analyses result in the most strongly supported phylogeny of all major frog lineages and provide a timescale of frog evolution that suggests much younger divergence times than suggested by earlier studies. Unexpectedly, our divergence-time analyses show that three species-rich clades (Hyloidea, Microhylidae, and Natatanura), which together comprise ∼88% of extant anuran species, simultaneously underwent rapid diversification at the Cretaceous–Paleogene (K–Pg) boundary (KPB). Moreover, anuran families and subfamilies containing arboreal species originated near or after the KPB. These results suggest that the K–Pg mass extinction may have triggered explosive radiations of frogs by creating new ecological opportunities. This phylogeny also reveals relationships such as Microhylidae being sister to all other ranoid frogs and African continental lineages of Natatanura forming a clade that is sister to a clade of Eurasian, Indian, Melanesian, and Malagasy lineages. Biogeographical analyses suggest that the ancestral area of modern frogs was Africa, and their current distribution is largely associated with the breakup of Pangaea and subsequent Gondwanan fragmentation. PMID:28673970

Phylogenomics reveals rapid, simultaneous diversification of three major clades of Gondwanan frogs at the Cretaceous-Paleogene boundary.

Science.gov (United States)

Feng, Yan-Jie; Blackburn, David C; Liang, Dan; Hillis, David M; Wake, David B; Cannatella, David C; Zhang, Peng

2017-07-18

Frogs (Anura) are one of the most diverse groups of vertebrates and comprise nearly 90% of living amphibian species. Their worldwide distribution and diverse biology make them well-suited for assessing fundamental questions in evolution, ecology, and conservation. However, despite their scientific importance, the evolutionary history and tempo of frog diversification remain poorly understood. By using a molecular dataset of unprecedented size, including 88-kb characters from 95 nuclear genes of 156 frog species, in conjunction with 20 fossil-based calibrations, our analyses result in the most strongly supported phylogeny of all major frog lineages and provide a timescale of frog evolution that suggests much younger divergence times than suggested by earlier studies. Unexpectedly, our divergence-time analyses show that three species-rich clades (Hyloidea, Microhylidae, and Natatanura), which together comprise ∼88% of extant anuran species, simultaneously underwent rapid diversification at the Cretaceous-Paleogene (K-Pg) boundary (KPB). Moreover, anuran families and subfamilies containing arboreal species originated near or after the KPB. These results suggest that the K-Pg mass extinction may have triggered explosive radiations of frogs by creating new ecological opportunities. This phylogeny also reveals relationships such as Microhylidae being sister to all other ranoid frogs and African continental lineages of Natatanura forming a clade that is sister to a clade of Eurasian, Indian, Melanesian, and Malagasy lineages. Biogeographical analyses suggest that the ancestral area of modern frogs was Africa, and their current distribution is largely associated with the breakup of Pangaea and subsequent Gondwanan fragmentation.

A success model and implementation on examining teacher’s attitude in using frog virtual learning environment

Directory of Open Access Journals (Sweden)

Wan Rozaini Sheik Osman

2017-12-01

Full Text Available The Frog Virtual Learning Environment (Frog VLE together with school administrators, teachers, students and parents has formed the concept of a virtual community within the school environment. The research uses a qualitative approach that involves interviewing four selected teachers in a primary school located in the district of Baling/ Sik, Kedah. The study employs a structured questionnaire as an interview protocol instrument. The questionnaires were also distributed to sixteen other teachers to compare the responses. The findings showed that teachers were using Frog VLE application and it helps in teaching and learning. Frog VLE also motivates teachers to teach better. However, not all teachers are comfortable using it because there are many obstacles and constraints that teachers face when applying them. The analysis of result from the teacher’s attitude indicated that there was an important relationship between the teacher’s basic knowledge of ICT and the skills in accessing the Frog VLE.

COMPARATIVE ACTIVITY OF CECROPIN A AND POLYMYXIN B AGAINST FROG BACTERIAL PATHOGENS

Directory of Open Access Journals (Sweden)

Ermin Schadich

2013-03-01

Full Text Available The antimicrobial activity of two antimicrobial peptides, cecropin A and polymyxin B against different bacterial pathogens associated with bacterial dermatosepticemia, a fatal bacterial infectious disease of frogs was investigated. The peptides were tested in serial of concentrations (100-0.19 µg/ml for growth inhibition of seven pathogens: Aeromonas hydrophila, Chryseobacterium meningosepticum, Citrobacter freundii, Klebsiella pneumoniae, Pseudomonas aeruginosa, Proteus mirabilis and Serratia liquefaciens. Their antimicrobial activity was compared with that of two antimicrobial peptides from frog skin, magainin 2 and aurein 2.1. Both cecropin A and polymyxin B, completely inhibited the growth of three pathogens: C. freundii, K. pneumoniae and P. aeruginosa at a concentration some sixteen times less than two skin peptides. Furthermore, cecropin A inhibited the growth of three pathogens resistant to the two skin peptides, A. hydrophila, C. meningosepticum and P. mirabilis. Polymyxin B also inhibited the growth of three pathogens resistant to the skin peptides, A. hydrophila, C. meningosepticum and S. liquefaciens. Cecropin A and polymyxin B have marked antibacterial activity against different frog bacterial pathogens indicating potential for therapeutic measures.Keywords: frogs, antimicrobial, bacteria, cecropin, polymyxin, resistance

Indirect human impacts reverse centuries of carbon sequestration and salt marsh accretion.

Science.gov (United States)

Coverdale, Tyler C; Brisson, Caitlin P; Young, Eric W; Yin, Stephanie F; Donnelly, Jeffrey P; Bertness, Mark D

2014-01-01

Direct and indirect human impacts on coastal ecosystems have increased over the last several centuries, leading to unprecedented degradation of coastal habitats and loss of ecological services. Here we document a two-century temporal disparity between salt marsh accretion and subsequent loss to indirect human impacts. Field surveys, manipulative experiments and GIS analyses reveal that crab burrowing weakens the marsh peat base and facilitates further burrowing, leading to bank calving, disruption of marsh accretion, and a loss of over two centuries of sequestered carbon from the marsh edge in only three decades. Analogous temporal disparities exist in other systems and are a largely unrecognized obstacle in attaining sustainable ecosystem services in an increasingly human impacted world. In light of the growing threat of indirect impacts worldwide and despite uncertainties in the fate of lost carbon, we suggest that estimates of carbon emissions based only on direct human impacts may significantly underestimate total anthropogenic carbon emissions.

The potential effects of climate change on the status of Seychelles frogs (Anura: Sooglossidae

Directory of Open Access Journals (Sweden)

J. Gerlach

2011-11-01

Full Text Available The status of the Seychelles frogs of the family Sooglossidae was investigated, using monitoring data from 1993-2010, climate data from 1998-2010 and studies of populations and local climate effects. Climate monitoring at each plot covered rainfall and temperature, with leaf wetness and soil moisture being monitored additionally at one site. Analysis of the data and ecological modelling of the distribution identify geographical patterns in climate which explain the present distribution of the different sooglossid species. In addition it identifies a drying trend in the first quarter of the year which corresponds to frog population declines in mid-altitude forests. This is interpreted as evidence of an ongoing deterioration in the suitability of habitats for the frogs, with declines recorded in areas of marginal suitability. By extension it is assumed that currently optimal frog habitat is also undergoing a decline in suitability, due to early year decreases in moisture. Projected changes in climate were used to predict changes in ranges of the sooglossids over the next 90 years. This predicts significant declines, with the possible extinction of the palm frog Sooglossus pipilodryas by 2100. Accordingly all four sooglossid species should be categorised as Endangered, rather than their current status of Vulnerable. Captive assurance colonies have not been successfully established to date. Captive groups have been maintained with a high degree of success but breeding has not been recorded so far. Further work needed for the conservation of the frogs is outlined: development of a reliable method of monitoring the cryptic S. thomasseti and development of captive breeding techniques.

Effects of oil on the rate and trajectory of Louisiana marsh shoreline erosion

International Nuclear Information System (INIS)

McClenachan, Giovanna; Eugene Turner, R; Tweel, Andrew W

2013-01-01

Oil can have long-term detrimental effects on marsh plant health, both above- and belowground. However, there are few data available that quantify the accelerated rate of erosion that oil may cause to marshes and the trajectory of change. Between November 2010 and August 2012, we collected data on shoreline erosion, soil strength, per cent cover of Spartina alterniflora, and marsh edge overhang at 30 closely spaced low oil and high oil sites in Bay Batiste, Louisiana. Surface oil samples were taken one meter into the marsh in February 2011. All high oiled sites in Bay Batiste were contaminated with Macondo 252 oil (oil from the Deepwater Horizon oil spill, 20 April–15 July 2010). The results suggest that there is a threshold where soil parameters change dramatically with a relatively small increase in oil concentration in the soil. Heavy oiling weakens the soil, creating a deeper undercut of the upper 50 cm of the marsh edge, and causing an accelerated rate of erosion that cascades along the shoreline. Our results demonstrate that it could take at least 2 yr to document the effects heavy oiling has had on the marsh shoreline. The presence of aboveground vegetation alone may not be an appropriate indicator of recovery. (letter)

Precision Monitoring of Water Level in a Salt Marsh with Low Cost Tilt Loggers

Science.gov (United States)

Sheremet, Vitalii A.; Mora, Jordan W.

2016-04-01

Several salt pannes and pools in the Sage Lot tidal marsh of Waquoit Bay system, MA were instrumented with newly developed Arm-and-Float water level gauges (utilizing accelerometer tilt logger) permitting to record water level fluctuations with accuracy of 1 mm and submillimeter resolution. The methodology of the instrument calibration, deployment, and elevation control are described. The instrument performance was evaluated. Several month long deployments allowed us to analyze the marsh flooding and draining processes, study differences among the salt pannes. The open channel flow flooding-draining mechanism and slower seepage were distinguished. From the drain curve the seepage rate can be quantified. The seepage rate remains approximately constant for all flooding draining episodes, but varies from panne to panne depending on bottom type and location. Seasonal differences due to the growth of vegetation are also recorded. The analysis of rain events allows us to estimate the catch area of subbasins in the marsh. The implication for marsh ecology and marsh accretion are discussed. The gradual sea level rise coupled with monthly tidal datum variability and storm surges result in migration and development of a salt marsh. The newly developed low cost instrumentation allows us to record and analyze these changes and may provide guidance for the ecological management.

Pesticide concentrations in frog tissue and wetland habitats in alandscape dominated by agriculture

Science.gov (United States)

Smalling, Kelly L.; Reeves, Rebecca; Muths, Erin L.; Vandever, Mark W.; Battaglin, William A.; Hladik, Michelle; Pierce, Clay L.

2015-01-01

Habitat loss and exposure to pesticides are likely primary factors contributing to amphibian decline in agricultural landscapes. Conservation efforts have attempted to restore wetlands lost through landscape modifications to reduce contaminant loads in surface waters and providing quality habitat to wildlife. The benefits of this increased wetland area, perhaps especially for amphibians, may be negated if habitat quality is insufficient to support persistent populations. We examined the presence of pesticides and nutrients in water and sediment as indicators of habitat quality and assessed the bioaccumulation of pesticides in the tissue of two native amphibian species Pseudacris maculata (chorus frogs) and Lithobates pipiens (leopard frogs) at six wetlands (3 restored and 3 reference) in Iowa, USA. Restored wetlands are positioned on the landscape to receive subsurface tile drainage water while reference wetlands receive water from overland run-off and shallow groundwater sources. Concentrations of the pesticides frequently detected in water and sediment samples were not different between wetland types. The median concentration of atrazine in surface water was 0.2 μg/L. Reproductive abnormalities in leopard frogs have been observed in other studies at these concentrations. Nutrient concentrations were higher in the restored wetlands but lower than concentrations thought lethal to frogs. Complex mixtures of pesticides including up to 8 fungicides, some previously unreported in tissue, were detected with concentrations ranging from 0.08 to 1500 μg/kg wet weight. No significant differences in pesticide concentrations were observed between species, although concentrations tended to be higher in leopard frogs compared to chorus frogs, possibly because of differences in life histories. Our results provide information on habitat quality in restored wetlands that will assist state and federal agencies, landowners, and resource managers in identifying and

Guide to Common Tidal Marsh Invertebrates of the Northeastern Gulf of Mexico.

Science.gov (United States)

Heard, Richard W.

The major groups of marine and estuarine macroinvertebrates of the tidal marshes of the northern Gulf of Mexico are described in this guide for students, taxonomists and generalists. Information on the recognition characteristics, distribution, habitat, and biology of salt marsh species from the coelenterate, annelid, mollusk and arthropod phyla…

Asplenium bird’s nest ferns in rainforest canopies are climate-contingent refuges for frogs

Directory of Open Access Journals (Sweden)

Brett R. Scheffers

2014-12-01

Full Text Available Epiphytes are important for canopy dwelling organisms because they provide a cool and moist microhabitat in the relatively hot and dry canopy. Here we examine whether epiphytic Asplenium ferns act as important habitats for arboreal frogs. We conducted extensive fern and habitat surveys for frogs in the Philippines, and complimented these surveys with roaming day and night canopy surveys to identify the full extent of habitat use across the vertical strata. We artificially dried ferns of various sizes to identify relationships between water and temperature buffering. Ferns are the preferred diurnal microhabitat and breeding habitat for arboreal frogs. A strong positive relationship exists between fern size and frog usage and abundance. Our drying experiments show that large ferns buffer maximum temperatures and reduce variability in temperatures, and buffering is directly linked to their hydration. Frogs are likely using large ferns for their moist, cool, environments for breeding and daytime retreat, which supports the buffered microhabitat hypothesis—these plants promote species coexistence through habitat creation and amelioration of physical stress. However, drying experiments suggest that this buffering is contingent on regular rainfall. Altered rainfall regimes could lead to the unexpected loss of the functional capacity of these important fern habitats. Keywords: Climate change, Functionality, Microhabitat, Refuge, Ectotherm, Precipitation

Assessment of static flood modeling techniques: application to contrasting marshes flooded during Xynthia (western France

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J. F. Breilh

2013-06-01

Full Text Available This study aims to assess the performance of raster-based flood modeling methods on a wide diversity of coastal marshes. These methods are applied to the flooding associated with the storm Xynthia, which severely hit the western coast of France in February 2010. Static and semi-dynamic methods are assessed using a combination of LiDAR data, post-storm delineation of flooded areas and sea levels originating from both tide gauge measurements and storm surge modeling. Static methods are applied to 27 marshes showing a wide geomorphological diversity. It appears that these methods are suitable for marshes with a small distance between the coastline and the landward boundary of the marsh, which causes these marshes to flood rapidly. On the contrary, these methods overpredict flooded areas for large marshes where the distance between the coastline and the landward boundary of the marsh is large, because the flooding cannot be considered as instantaneous. In this case, semi-dynamic methods based on surge overflowing volume calculations can improve the flooding prediction significantly. This study suggests that static and semi-dynamic flood modeling methods can be attractive and quickly deployed to rapidly produce predictive flood maps of vulnerable areas under certain conditions, particularly for small distances between the coastline and the landward boundary of the low-lying coastal area.

Vegetation cover, tidal amplitude and land area predict short-term marsh vulnerability in Coastal Louisiana

Science.gov (United States)

Schoolmaster, Donald; Stagg, Camille L.; Sharp, Leigh Anne; McGinnis, Tommy S.; Wood, Bernard; Piazza, Sarai

2018-01-01

The loss of coastal marshes is a topic of great concern, because these habitats provide tangible ecosystem services and are at risk from sea-level rise and human activities. In recent years, significant effort has gone into understanding and modeling the relationships between the biological and physical factors that contribute to marsh stability. Simulation-based process models suggest that marsh stability is the product of a complex feedback between sediment supply, flooding regime and vegetation response, resulting in elevation gains sufficient to match the combination of relative sea-level rise and losses from erosion. However, there have been few direct, empirical tests of these models, because long-term datasets that have captured sufficient numbers of marsh loss events in the context of a rigorous monitoring program are rare. We use a multi-year data set collected by the Coastwide Reference Monitoring System (CRMS) that includes transitions of monitored vegetation plots to open water to build and test a predictive model of near-term marsh vulnerability. We found that despite the conclusions of previous process models, elevation change had no ability to predict the transition of vegetated marsh to open water. However, we found that the processes that drive elevation change were significant predictors of transitions. Specifically, vegetation cover in prior year, land area in the surrounding 1 km2 (an estimate of marsh fragmentation), and the interaction of tidal amplitude and position in tidal frame were all significant factors predicting marsh loss. This suggests that 1) elevation change is likely better a predictor of marsh loss at time scales longer than we consider in this study and 2) the significant predictive factors affect marsh vulnerability through pathways other than elevation change, such as resistance to erosion. In addition, we found that, while sensitivity of marsh vulnerability to the predictive factors varied spatially across coastal Louisiana

Salt marsh construction costs and shrimp production

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Continuing wetland loss in Galveston Bay, Texas (USA) has led to the development of various salt marsh restoration projects. These constructed wetlands often attempt...

Biofilms' contribution to organic carbon in salt marsh sediments

Science.gov (United States)

Valentine, K.; Quirk, T. E.; Mariotti, G.; Hotard, A.

2017-12-01

Coastal salt marshes are productive environments with high potential for carbon (C) accumulation. Organic C in salt marsh sediment is typically attributed to plant biomass. Recent field measurements, however, suggest that biofilms - mainly composed of benthic diatoms and their secretion - also contribute to basal C in these environments and can be important contributors to marsh productivity, C cycling, and potentially, C sequestration. The potential for biofilms to soil organic C and the influence of mineral sedimentation of biofilm-based C accumulation is unknown. We conducted controlled laboratory experiments to test (1) whether biofilms add measurable amounts of organic C to the sediment and (2) the effect of mineral sedimentation rate on the amount of biofilm-based C accumulation. Settled beds of pure bentonite mud were created in 10-cm-wide cylinders. Each cylinder was inoculated with biofilms collected from a marsh in Louisiana. A small amount of mud was added weekly for 11 weeks. Control experiments without biofilms were also performed. Biofilms were grown with a 12/12 hours cycle, with a gentle mixing of the water column that did not cause sediment resuspension, with a nutrient-rich medium that was exchanged weekly, and in the absence of metazoan grazing. At the end of the experiment, the sediment columns were analyzed for depth-integrated chl-a, loss on ignition (LOI), and total organic carbon (TOC). Chl-a values ranged from 26-113 mg/cm2, LOI values ranged from 86-456 g/m2/yr, and TOC values ranged from 31-211 g/m2/yr. All three of these metrics (chl-a, LOI, and TOC) increased with the rate of mineral sedimentation. These results show that biofilms, in the absence of erosion and grazing, can significantly contribute to C accumulation in salt marshes, especially with high rates of mineral sedimentation. Given the short time scale of the experiment, the increase in organic C accumulation with the rate of sedimentation is attributed to stimulated biofilm

Automated Detection of Salt Marsh Platforms : a Topographic Method

Science.gov (United States)

Goodwin, G.; Mudd, S. M.; Clubb, F. J.

2017-12-01

Monitoring the topographic evolution of coastal marshes is a crucial step toward improving the management of these valuable landscapes under the pressure of relative sea level rise and anthropogenic modification. However, determining their geometrically complex boundaries currently relies on spectral vegetation detection methods or requires labour-intensive field surveys and digitisation.We propose a novel method to reproducibly isolate saltmarsh scarps and platforms from a DEM. Field observations and numerical models show that saltmarshes mature into sub-horizontal platforms delineated by sub-vertical scarps: based on this premise, we identify scarps as lines of local maxima on a slope*relief raster, then fill landmasses from the scarps upward, thus isolating mature marsh platforms. Non-dimensional search parameters allow batch-processing of data without recalibration. We test our method using lidar-derived DEMs of six saltmarshes in England with varying tidal ranges and geometries, for which topographic platforms were manually isolated from tidal flats. Agreement between manual and automatic segregation exceeds 90% for resolutions of 1m, with all but one sites maintaining this performance for resolutions up to 3.5m. For resolutions of 1m, automatically detected platforms are comparable in surface area and elevation distribution to digitised platforms. We also find that our method allows the accurate detection of local bloc failures 3 times larger than the DEM resolution.Detailed inspection reveals that although tidal creeks were digitised as part of the marsh platform, automatic detection classifies them as part of the tidal flat, causing an increase in false negatives and overall platform perimeter. This suggests our method would benefit from a combination with existing creek detection algorithms. Fallen blocs and pioneer zones are inconsistently identified, particularly in macro-tidal marshes, leading to differences between digitisation and the automated method

ICE on the road to auditory sensitivity reduction and sound localization in the frog.

Science.gov (United States)

Narins, Peter M

2016-10-01

Frogs and toads are capable of producing calls at potentially damaging levels that exceed 110 dB SPL at 50 cm. Most frog species have internally coupled ears (ICE) in which the tympanic membranes (TyMs) communicate directly via the large, permanently open Eustachian tubes, resulting in an inherently directional asymmetrical pressure-difference receiver. One active mechanism for auditory sensitivity reduction involves the pressure increase during vocalization that distends the TyM, reducing its low-frequency airborne sound sensitivity. Moreover, if sounds generated by the vocal folds arrive at both surfaces of the TyM with nearly equal amplitudes and phases, the net motion of the eardrum would be greatly attenuated. Both of these processes appear to reduce the motion of the frog's TyM during vocalizations. The implications of ICE in amphibians with respect to sound localizations are discussed, and the particularly interesting case of frogs that use ultrasound for communication yet exhibit exquisitely small localization jump errors is brought to light.

Convergent Substitutions in a Sodium Channel Suggest Multiple Origins of Toxin Resistance in Poison Frogs.

Science.gov (United States)

Tarvin, Rebecca D; Santos, Juan C; O'Connell, Lauren A; Zakon, Harold H; Cannatella, David C

2016-04-01

Complex phenotypes typically have a correspondingly multifaceted genetic component. However, the genotype-phenotype association between chemical defense and resistance is often simple: genetic changes in the binding site of a toxin alter how it affects its target. Some toxic organisms, such as poison frogs (Anura: Dendrobatidae), have defensive alkaloids that disrupt the function of ion channels, proteins that are crucial for nerve and muscle activity. Using protein-docking models, we predict that three major classes of poison frog alkaloids (histrionicotoxins, pumiliotoxins, and batrachotoxins) bind to similar sites in the highly conserved inner pore of the muscle voltage-gated sodium channel, Nav1.4. We predict that poison frogs are somewhat resistant to these compounds because they have six types of amino acid replacements in the Nav1.4 inner pore that are absent in all other frogs except for a distantly related alkaloid-defended frog from Madagascar, Mantella aurantiaca. Protein-docking models and comparative phylogenetics support the role of these replacements in alkaloid resistance. Taking into account the four independent origins of chemical defense in Dendrobatidae, phylogenetic patterns of the amino acid replacements suggest that 1) alkaloid resistance in Nav1.4 evolved independently at least seven times in these frogs, 2) variation in resistance-conferring replacements is likely a result of differences in alkaloid exposure across species, and 3) functional constraint shapes the evolution of the Nav1.4 inner pore. Our study is the first to demonstrate the genetic basis of autoresistance in frogs with alkaloid defenses. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Tidal events and salt-marsh structure influence black mangrove (Avicennia germinans) recruitment across an ecotone.

Science.gov (United States)

Peterson, Jennifer M; Bell, Susan S

2012-07-01

Field experiments were conducted at a black mangrove-salt-marsh ecotone in southwest Florida (U.S.A.) to investigate retention of propagules of the black mangrove, Avicennia germinans, by salt-marsh plants as a mechanism of facilitation operating on recruitment success at landward boundaries. Buoyant A. germinans propagules are dispersed by tides, and stranding is required for establishment; therefore, processes that enable stranding should facilitate mangrove recruitment. We expected the physical structure of salt-marsh vegetation to define propagule retention capacity, and we predicted that salt-marsh plants with distinct growth forms would differentially retain propagules. Experimental monoculture plots (1 m2) of salt-marsh plants with different growth forms (Sporobolus virginicus [grass], Sesuvium portulacastrum [succulent forb], and Batis maritima [succulent scrub]) were created, and A. germinans propagules were emplaced into these plots and monitored over time. For comparison, propagules were also placed into natural polyculture plots (1 m2). Polyculture plots contained at least two of the salt-marsh plant taxa selected for monoculture treatments, and S. virginicus was always present within these polyculture plots. Natural polyculture plots retained 59.3% +/- 11.0% (mean +/- SE) of emplaced propagules. Monocultures varied in their propagule retention capacities with plots of S. virginicus retaining on average 65.7% +/- 11.5% of transplanted propagules compared to 7.2% +/- 1.8% by B. maritima and 5.0% +/- 1.9% by S. portulacastrum. Plots containing S. virginicus retained a significantly greater percentage of emplaced propagules relative to the two succulent salt-marsh taxa. Furthermore, propagule entrapment, across all treatments, was strongly correlated with salt-marsh structure (r2 = 0.6253, P = 0.00001), which was estimated using an indirect quantitative metric (lateral obstruction) calculated from digital images of plots. Overall, our findings imply that

FROG ASSEMBLAGE ASSOCIATED WITH BROMELIADS IN A SANDY COASTAL PLAIN IN THE STATE OF ESPÍRITO SANTO, SOUTHEASTERN BRAZIL

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MARCIO MARQUES MAGESKI

Full Text Available ABSTRACT Amphibians may use bromeliads for reproduction (i.e., bromeligenous species or only for refuge and foraging (i.e., bromelicolous species. The partition of bromeliad resources is essential to maintain the coexistence of the associated assemblages. We sampled 913 bromeliads in a sandy coastal plain (i.e., restinga habitat in southeastern Brazil and found 234 frogs belonging to seven species. One of the frog species was bromeligenous and the other six were facultative bromelicolous. The bromeliads of the genus Aechmea were the most frequently used by frogs. The low degree of frog occupancy of bromeliads (26% suggests habitat segregation. Our study highlights the importance of maintenance of bromeliad species for conservation of the associated frog assemblages.

Radionuclides transfer into halophytes growing in tidal salt marshes from the Southwest of Spain

International Nuclear Information System (INIS)

Luque, Carlos J.; Vaca, Federico; García-Trapote, Ana; Hierro, Almudena; Bolívar, Juan P.; Castellanos, Eloy M.

2015-01-01

Estuaries are sinks of materials and substances which are released directly into them or transported from rivers that drain the basin. It is usual to find high organic matter loads and fine particles in the sediments. We analyzed radionuclide concentrations ("2"1"0Po, "2"3"0Th, "2"3"2Th, "2"3"4U, "2"3"8U, "2"2"6Ra, "2"2"8Th, "2"2"8Ra, "4"0K) in sediments and three different organs (roots, stems and leaves) of three species of halophytes plants (Spartina maritima, Spartina densiflora and Sarcocornia perennis). The study was carried out in two tidal salt marshes, one polluted by U-series radionuclides and another nearby that was unpolluted and was used as a control (or reference) area. The Tinto River salt marsh shows high levels of U-series radionuclides coming from mining and industrial discharges. On the contrary, the unperturbed Piedras River salt marsh is located about 25 km from the Tinto marsh, and shows little presence of contaminants and radionuclides. The results of this work have shown that natural radionuclide concentrations (specially the U-isotopes) in the Tinto salt marsh sediments are one order of magnitude higher than those in the Piedras marsh. These radionuclide enhancements are reflected in the different organs of the plants, which have similar concentration increases as the sediments where they have grown. Finally, the transfer factor (TF) of the most polluted radionuclides (U-isotopes and "2"1"0Po) in the Tinto area are one order of magnitude higher than in the Piedras area, indicating that the fraction of each radionuclide in the sediment originating from the pollution is more available for the plants than the indigenous fraction. This means that the plants of the salt marshes are unhelpful as bioindicators or for the phytoremediation of radionuclides. - Highlights: • Radionuclides were analyzed in sediments and plants in unpolluted salt marshes. • Plants uptake radionuclides in all organs in both salt marshes. • The transfer factors

Geostatistical evaluation of integrated marsh management impact on mosquito vectors using before-after-control-impact (BACI) design

OpenAIRE

Rochlin, Ilia; Iwanejko, Tom; Dempsey, Mary E; Ninivaggi, Dominick V

2009-01-01

Abstract Background In many parts of the world, salt marshes play a key ecological role as the interface between the marine and the terrestrial environments. Salt marshes are also exceedingly important for public health as larval habitat for mosquitoes that are vectors of disease and significant biting pests. Although grid ditching and pesticides have been effective in salt marsh mosquito control, marsh degradation and other environmental considerations compel a different approach. Targeted h...

Delineation of marsh types from Corpus Christi Bay, Texas, to Perdido Bay, Alabama, in 2010

Science.gov (United States)

Enwright, Nicholas M.; Hartley, Stephen B.; Couvillion, Brady R.; Michael G. Brasher,; Jenneke M. Visser,; Michael K. Mitchell,; Bart M. Ballard,; Mark W. Parr,; Barry C. Wilson,

2015-07-23

Coastal zone managers and researchers often require detailed information regarding emergent marsh vegetation types (that is, fresh, intermediate, brackish, and saline) for modeling habitat capacities and needs of marsh dependent taxa (such as waterfowl and alligator). Detailed information on the extent and distribution of emergent marsh vegetation types throughout the northern Gulf of Mexico coast has been historically unavailable. In response, the U.S. Geological Survey, in collaboration with the Gulf Coast Joint Venture, the University of Louisiana at Lafayette, Ducks Unlimited, Inc., and the Texas A&M University-Kingsville, produced a classification of emergent marsh vegetation types from Corpus Christi Bay, Texas, to Perdido Bay, Alabama.

78 FR 24471 - Endangered and Threatened Wildlife and Plants; Endangered Status for the Sierra Nevada Yellow...

Science.gov (United States)

2013-04-25

... patterned with dark spots (Jennings and Hayes 1994, p. 74; Stebbins 2003, p. 233). These spots may be large...). Mountain yellow-legged frogs have smoother skin, generally with heavier spotting and mottling dorsally...

A trophic cascade triggers collapse of a salt-marsh ecosystem with intensive recreational fishing.

Science.gov (United States)

Altieri, Andrew H; Bertness, Mark D; Coverdale, Tyler C; Herrmann, Nicholas C; Angelini, Christine

2012-06-01

Overexploitation of predators has been linked to the collapse of a growing number of shallow-water marine ecosystems. However, salt-marsh ecosystems are often viewed and managed as systems controlled by physical processes, despite recent evidence for herbivore-driven die-off of marsh vegetation. Here we use field observations, experiments, and historical records at 14 sites to examine whether the recently reported die-off of northwestern Atlantic salt marshes is associated with the cascading effects of predator dynamics and intensive recreational fishing activity. We found that the localized depletion of top predators at sites accessible to recreational anglers has triggered the proliferation of herbivorous crabs, which in turn results in runaway consumption of marsh vegetation. This suggests that overfishing may be a general mechanism underlying the consumer-driven die-off of salt marshes spreading throughout the western Atlantic. Our findings support the emerging realization that consumers play a dominant role in regulating marine plant communities and can lead to ecosystem collapse when their impacts are amplified by human activities, including recreational fishing.

Interagency partnership to assess and restore a degraded urban riverine wetland: Dyke Marsh Wildlife Preserve, Virginia

Science.gov (United States)

Steury, Brent W.; Litwin, Ronald J.; Oberg, Erik T.; Smoot, Joseph P.; Pavich, Milan J.; Sanders, Geoffrey; Santucci, Vincent L.

2014-01-01

The narrow-leaved cattail wetland known as Dyke Marsh formally became a land holding of George Washington Memorial Parkway (GWMP, a unit of the national park system) in 1959, along with a congressional directive to honor a newly-let 30-year commercial sand and gravel dredge-mining lease at the site. Dredging continued until 1974 when Public Law 93-251 called for the National Park Service and the United States Army Corps of Engineers to “implement restoration of the historical and ecological values of Dyke Marsh.” By that time, about 83 acres of the marsh remained, and no congressional funding accompanied the passage of the law to effect any immediate conservation or restoration. Decades of dredge mining had severely altered the surface area of Dyke Marsh, the extent of its tidal creek system, and the shallow river bottom of the Potomac River abutting the marsh. Further, mining destabilized the marsh, causing persistent erosion, shoreline retreat, and tidal channel widening after mining ceased. Erosion has continued unchecked until the present; approximately 50 acres of the original marsh are now estimated to remain. The specific cause of persistent erosion had been unknown prior to this collaborative study but previously was assumed to be due to flooding by the Potomac River.

Dynamics of mangrove-marsh ecotones in subtropical coastal wetlands: fire, sea-level rise, and water levels

Science.gov (United States)

Smith, Thomas J.; Foster, Ann M.; Tiling-Range, Ginger; Jones, John W.

2013-01-01

Ecotones are areas of sharp environmental gradients between two or more homogeneous vegetation types. They are a dynamic aspect of all landscapes and are also responsive to climate change. Shifts in the position of an ecotone across a landscape can be an indication of a changing environment. In the coastal Everglades of Florida, USA, a dominant ecotone type is that of mangrove forest and marsh. However, there is a variety of plants that can form the marsh component, including sawgrass (Cladium mariscus [L.] Pohl), needlegrass rush (Juncus roemerianus Scheele), and spikerush (Eleocharis spp.). Environmental factors including water depth, soil type, and occurrence of fires vary across these ecotones, influencing their dynamics. Altered freshwater inflows from upstream and increasing sea level over the past 100 years may have also had an impact. We analyzed a time series of historical aerial photographs for a number of sites in the coastal Everglades and measured change in position of mangrove–marsh ecotones. For three sites, detailed maps were produced and the area of marsh, mangrove, and other habitats was determined for five periods spanning the years 1928 to 2004. Contrary to our initial hypothesis on fire, we found that fire did not prevent mangrove expansion into marsh areas but may in fact assist mangroves to invade some marsh habitats, especially sawgrass. Disparate patterns in mangrove–marsh change were measured at two downstream sites, both of which had multiple fires over from 1948 to 2004. No change in mangrove or marsh area was measured at one site. Mangrove area increased and marsh area decreased at the second of these fire-impacted sites. We measured a significant increase in mangrove area and a decline in marsh area at an upstream site that had little occurrence of fire. At this site, water levels have increased significantly as sea level has risen, and this has probably been a factor in the mangrove expansion.

Comparison of Bottomless Lift Nets and Breder Traps for Sampling Salt-Marsh Nekton

Science.gov (United States)

Vegetated salt-marsh surfaces provide refuge, forage, and spawning habitat for estuarine nekton, yet are threatened by accelerating rates of sea-level rise in southern New England and elsewhere. Nekton responses to ongoing marsh surface changes need to be evaluated with effective...

Maintenance of salt barrens inhibited landward invasion of Spartina species in salt marshes

NARCIS (Netherlands)

Qi, Man; Sun, Tao; Zhang, Heyue; Zhu, Meisha; Yang, Ying-Wei; Shao, Dongdong; Voinov, Alexey

2017-01-01

Spartina spp. (cordgrasses) often dominates intertidal mudflats and/or low marshes. The landward invasion of these species was typically thought to be restrained by low tidal inundation frequencies and interspecific competition. We noticed that the reported soil salinity levels in some salt marshes

Liver spots

Science.gov (United States)

... skin changes - liver spots; Senile or solar lentigines; Skin spots - aging; Age spots ... Liver spots are changes in skin color that occur in older skin. The coloring may be due to aging, exposure to the sun ...

Final report for sea-level rise response modeling for San Francisco Bay estuary tidal marshes

Science.gov (United States)

Takekawa, John Y.; Thorne, Karen M.; Buffington, Kevin J.; Spragens, Kyle A.; Swanson, Kathleen M.; Drexler, Judith Z.; Schoellhamer, David H.; Overton, Cory T.; Casazza, Michael L.

2013-01-01

The International Panel on Climate Change has identified coastal ecosystems as areas that will be disproportionally affected by climate change. Current sea-level rise projections range widely with 0.57 to 1.9 meters increase in mea sea level by 2100. The expected accelerated rate of sea-level rise through the 21st century will put many coastal ecosystems at risk, especially those in topographically low-gradient areas. We assessed marsh accretion and plant community state changes through 2100 at 12 tidal salt marshes around San Francisco Bay estuary with a sea-level rise response model. Detailed ground elevation, vegetation, and water level data were collected at all sites between 2008 and 2011 and used as model inputs. Sediment cores (taken by Callaway and others, 2012) at four sites around San Francisco Bay estuary were used to estimate accretion rates. A modification of the Callaway and others (1996) model, the Wetland Accretion Rate Model for Ecosystem Resilience (WARMER), was utilized to run sea-level rise response models for all sites. With a mean sea level rise of 1.24 m by 2100, WARMER projected that the vast majority, 95.8 percent (1,942 hectares), of marsh area in our study will lose marsh plant communities by 2100 and to transition to a relative elevation range consistent with mudflat habitat. Three marshes were projected to maintain marsh vegetation to 2100, but they only composed 4.2 percent (85 hectares) of the total marsh area surveyed.

Acute Toxicity of a Heavy Metal Cadmium to an Anuran, the Indian Skipper Frog Rana cyanophlyctis

Directory of Open Access Journals (Sweden)

Ajai Kumar Srivastav

2016-08-01

Full Text Available Background: There has been increasing awareness throughout the world regarding the remarkable decrease in amphibian population. For such amphibian population decline several causes have been given. Cadmium, a heavy metal is released both from natural sources (leaching of cadmium rich soils and anthropogenic activities to the aquatic and terrestrial environments. This study evaluated the toxicity of heavy metal cadmium to Indian skipper frog Rana cyanophlyctis. Methods: For the determination of LC50 values for cadmium, four-day static renewal acute toxicity test was used. Five replicates each containing ten frogs were subjected to each concentration of cadmium chloride (15, 20, 25, 30, 35, 40, 45 and 50 mg/L. At different exposure periods (24, 48, 72 and 96 h, the mortality of the frog was subjected to Probit analysis with the POLO-PC software (LeOra Software to calculate the LC50 and 95% confidence level. Results: The LC50 values of cadmium chloride for the frog R. cyanophlyctis at 24, 48, 72, and 96 h are 32.586, 29.994, 27.219 and 23.048 mg/L, respectively. The results have been discussed with the toxicity reported for other aquatic vertebrate --fish. Conclusion: Cadmium caused mortality to the frog and this could be one of the reasons for population decline of frogs which inhabit water contaminated with heavy metals.

Tidal marsh plant responses to elevated CO2 , nitrogen fertilization, and sea level rise.

Science.gov (United States)

Adam Langley, J; Mozdzer, Thomas J; Shepard, Katherine A; Hagerty, Shannon B; Patrick Megonigal, J

2013-05-01

Elevated CO2 and nitrogen (N) addition directly affect plant productivity and the mechanisms that allow tidal marshes to maintain a constant elevation relative to sea level, but it remains unknown how these global change drivers modify marsh plant response to sea level rise. Here we manipulated factorial combinations of CO2 concentration (two levels), N availability (two levels) and relative sea level (six levels) using in situ mesocosms containing a tidal marsh community composed of a sedge, Schoenoplectus americanus, and a grass, Spartina patens. Our objective is to determine, if elevated CO2 and N alter the growth and persistence of these plants in coastal ecosystems facing rising sea levels. After two growing seasons, we found that N addition enhanced plant growth particularly at sea levels where plants were most stressed by flooding (114% stimulation in the + 10 cm treatment), and N effects were generally larger in combination with elevated CO2 (288% stimulation). N fertilization shifted the optimal productivity of S. patens to a higher sea level, but did not confer S. patens an enhanced ability to tolerate sea level rise. S. americanus responded strongly to N only in the higher sea level treatments that excluded S. patens. Interestingly, addition of N, which has been suggested to accelerate marsh loss, may afford some marsh plants, such as the widespread sedge, S. americanus, the enhanced ability to tolerate inundation. However, if chronic N pollution reduces the availability of propagules of S. americanus or other flood-tolerant species on the landscape scale, this shift in species dominance could render tidal marshes more susceptible to marsh collapse. © 2013 Blackwell Publishing Ltd.

How is the chlorophyll count affected by burned and unburned marsh areas?

Science.gov (United States)

Kendrick, C.

2017-12-01

Does marsh burnings, either man made or natural, hinder or help Louisiana's vitally important coastal plant life? Does the carbon produced from the fires have a negative effect on the chlorophyll count of these precious living protective barriers? Or does it help contribute to raising the plants chlorophyll count? Along Louisiana's Gulf Coast, marsh burnings are conducted every 2-4 years to destroy some of the Spartina patens. Fires and smoke may have an effect on the chlorophyll count of the plants found in Louisiana's marshes. Peat burns, root burns, and cover burns are the three types of marsh fires. These burns can be either man made or started by natural causes. Peat burns occur when the soil is dry due to a drained marsh. Root burns occur when plant roots are burned without the soil being consumed. Cover burns occur when several centimeters of water covers the soil. Cover burns are often used by Wildlife and Fisheries personnel to promote preferred plant food growth like Scirpus olneyi rather than the dominant Spartina patens. Our project was conducted by testing marsh plants and obtaining chlorophyll count of both a burned (cover burn) and an unburned area. Approximately one year after the burn, in August 2015, we tested the burned area's site. We retested the same site in December 2016. The results from our testing showed that there was a slightly higher chlorophyll count in the burned area. The chlorophyll count average from the two testing days was 33.5 in the burned area and 30.15 in the unburned area. Our hypothesis was that the chlorophyll content of "controlled" burned wetland areas will have a higher amount than the "no" burn area. The experiment results supported this hypothesis by showing an increase of 3.35 average in the burned area.

Tritium behaviour in aquatic plants and animals in a freshwater marsh ecosystem

International Nuclear Information System (INIS)

Adams, L.W.; Peterle, T.J.; White, G.C.

1979-01-01

Ten curies of tritium as tritiated water (HTO) were experimentally added to an enclosed 2-ha Lake Erie marsh on 20 October 1973. Tritium kinetics in selected plants and animals were determined over a one-year period. Tritium levels in the marsh bottom sediment averaged 1.8 times the marsh water levels, with little evidence of tritium concentration above the marsh water tritium levels in the flora and fauna. The unbound tritium: marsh water tritium ratios in smartweed (Polygonum lapathifolium) and pickerelweed (Pontederia cordata) (both emergents) were lower than the same ratio for pondweed (Potamogeton crispus) (a submergent). There was some evidence of bound tritium buildup in midsummer, particularly in the pondweed. Tritium uptake into the unbound compartments of crayfish (Procambarus blandingi), carp (Cyprinus carpio) and bluegills (Lepomis macrochirus) was rapid. For crayfish, maximum HTO levels were observed on days 2 and 3 following treatment for muscle and viscera respectively. Unbound HTO in carp muscle peaked in 4 hours and the level in carp viscera reached a maximum in 2 days, in bluegill muscle and viscera on day 1. Unbound HTO in all species decreased following peak levels, paralleling marsh water HTO activity. Tritium uptake into the bound compartments was not as rapid nor were the levels as high as for unbound HTO in the fauna. The peak bound level in crayfish muscle was observed on day 10 (bound : unbound ratio of 0.34) and the maximum level in viscera was noted on day 20 (bound : unbound ratio of 0.23). Bound tritium in carp muscle and viscera reached maximum levels on day 20 (bound : unbound ratios of 0.25 and 0.39 respectively). In bluegills, peaks were reached on days 5 and 7 (bound : unbound ratios of 0.35 and 0.38 for muscle and viscera respectively). Bound tritium in all species decreased following maximum levels

Reciprocal Trophic Interactions and Transmission of Blood Parasites between Mosquitoes and Frogs

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Todd G. Smith

2012-04-01

Full Text Available The relationship between mosquitoes and their amphibian hosts is a unique, reciprocal trophic interaction. Instead of a one-way, predator-prey relationship, there is a cyclical dance of avoidance and attraction. This has prompted spatial and temporal synchrony between organisms, reflected in emergence time of mosquitoes in the spring and choice of habitat for oviposition. Frog-feeding mosquitoes also possess different sensory apparatuses than do their mammal-feeding counterparts. The reciprocal nature of this relationship is exploited by various blood parasites that use mechanical, salivary or trophic transmission to pass from mosquitoes to frogs. It is important to investigate the involvement of mosquitoes, frogs and parasites in this interaction in order to understand the consequences of anthropogenic actions, such as implementing biocontrol efforts against mosquitoes, and to determine potential causes of the global decline of amphibian species.

Discovery of alien water frogs (gen. Pelophylax in Umbria, with first report of P. shqipericus for Italy

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Dario Domeneghetti

2013-12-01

Full Text Available Allochthonous water frogs (gen. Pelophylax have been repeatedly introduced in several European countries, causing dramatic consequences for the conservation of indigenous taxa. In Italy, invasive populations are known for northern regions, where they were introduced mainly for edible and scientific purposes. Here, we report the first detection of an alien population of water frogs in Central Italy, along the Resina valley (Umbria. Genetic analysis of the mitochondrial ND3 gene polymorphism assigned some specimens to two different Pelophylax ridibundus clades widespread in Central and Eastern Europe. By contrast, two samples matched the mitochondrial DNA (mtDNA sequence of Pelophylax lessonae bergeri, an autochthonous taxon widespread in Central Italy, suggesting possible hybridization between alien and indigenous frogs. Finally, the specific haplotype of Pelophylax shqipericus, the Albanian Pool Frog, was also identified according to mtDNA polymorphism. This record, firstly reported for Italy, poses concerns for the conservation of this cryptic taxon, suggesting that international water frog trade may involve also particularly endangered species.

Post-mortem ecosystem engineering by oysters creates habitat for a rare marsh plant.

Science.gov (United States)

Guo, Hongyu; Pennings, Steven C

2012-11-01

Oysters are ecosystem engineers in marine ecosystems, but the functions of oyster shell deposits in intertidal salt marshes are not well understood. The annual plant Suaeda linearis is associated with oyster shell deposits in Georgia salt marshes. We hypothesized that oyster shell deposits promoted the distribution of Suaeda linearis by engineering soil conditions unfavorable to dominant salt marsh plants of the region (the shrub Borrichia frutescens, the rush Juncus roemerianus, and the grass Spartina alterniflora). We tested this hypothesis using common garden pot experiments and field transplant experiments. Suaeda linearis thrived in Borrichia frutescens stands in the absence of neighbors, but was suppressed by Borrichia frutescens in the with-neighbor treatment, suggesting that Suaeda linearis was excluded from Borrichia frutescens stands by interspecific competition. Suaeda linearis plants all died in Juncus roemerianus and Spartina alterniflora stands, regardless of neighbor treatments, indicating that Suaeda linearis is excluded from these habitats by physical stress (likely water-logging). In contrast, Borrichia frutescens, Juncus roemerianus, and Spartina alterniflora all performed poorly in Suaeda linearis stands regardless of neighbor treatments, probably due to physical stresses such as low soil water content and low organic matter content. Thus, oyster shell deposits play an important ecosystem engineering role in influencing salt marsh plant communities by providing a unique niche for Suaeda linearis, which otherwise would be rare or absent in salt marshes in the southeastern US. Since the success of Suaeda linearis is linked to the success of oysters, efforts to protect and restore oyster reefs may also benefit salt marsh plant communities.

The sedimentological characteristics and geochronology of the marshes of Dauphin Island, Alabama

Science.gov (United States)

Ellis, Alisha M.; Smith, Christopher G.; Marot, Marci E.

2018-03-22

In August 2015, scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center collected 11 push cores from the marshes of Dauphin Island and Little Dauphin Island, Alabama. Sample site environments included high marshes, low salt marshes, and salt flats, and varied in distance from the shoreline. The sampling efforts were part of a larger study to assess the feasibility and sustainability of proposed restoration efforts for Dauphin Island, Alabama, and to identify trends in shoreline erosion and accretion. The data presented in this publication can provide a basis for assessing organic and inorganic sediment accumulation rates and temporal changes in accumulation rates over multiple decades at multiple locations across the island. This study was funded by the National Fish and Wildlife Foundation, via the Gulf Environmental Benefit Fund. This report serves as an archive for the sedimentological and geochemical data derived from the marsh cores. Downloadable data are available and include Microsoft Excel spreadsheets (.xlsx), comma-separated values (.csv) text files, JPEG files, and formal Federal Geographic Data Committee metadata in a U.S. Geological Survey data release.

PEAT ACCRETION HISTORIES DURING THE PAST 6000 YEARS IN MARSHES OF THE SACRAMENTO - SAN JOAQUIN DELTA, CALIFORNIA, USA

Energy Technology Data Exchange (ETDEWEB)

Drexler, J Z; de Fontaine, C S; Brown, T A

2009-07-20

Peat cores were collected in 4 remnant marsh islands and 4 drained, farmed islands throughout the Sacramento - San Joaquin Delta of California in order to characterize the peat accretion history of this region. Radiocarbon age determination of marsh macrofossils at both marsh and farmed islands showed that marshes in the central and western Delta started forming between 6030 and 6790 cal yr BP. Age-depth models for three marshes were constructed using cubic smooth spline regression models. The resulting spline fit models were used to estimate peat accretion histories for the marshes. Estimated accretion rates range from 0.03 to 0.49 cm yr{sup -1} for the marsh sites. The highest accretion rates are at Browns Island, a marsh at the confluence of the Sacramento and San Joaquin rivers. Porosity was examined in the peat core from Franks Wetland, one of the remnant marsh sites. Porosity was greater than 90% and changed little with depth indicating that autocompaction was not an important process in the peat column. The mean contribution of organic matter to soil volume at the marsh sites ranges from 6.15 to 9.25% with little variability. In contrast, the mean contribution of inorganic matter to soil volume ranges from 1.40 to 8.45% with much greater variability, especially in sites situated in main channels. These results suggest that marshes in the Delta can be viewed as largely autochthonous vs. allochthonous in character. Autochthonous sites are largely removed from watershed processes, such as sediment deposition and scour, and are dominated by organic production. Allochthonous sites have greater fluctuations in accretion rates due to the variability of inorganic inputs from the watershed. A comparison of estimated vertical accretion rates with 20th century rates of global sea-level rise shows that currently marshes are maintaining their positions in the tidal frame, yet this offers little assurance of sustainability under scenarios of increased sea-level rise in

Changing Sediment Dynamics of a Mature Backbarrier Salt Marsh in Response to Sea-Level Rise and Storm Events

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Mark Schuerch

2018-05-01

Full Text Available Our study analyses the long-term development of a tidal backbarrier salt marsh in the northern German Wadden Sea. The focus lies on the development of the high-lying, inner, mature part of the salt marsh, which shows a striking history of changing sediment dynamics. The analysis of high-resolution old aerial photographs and sampled sediment cores suggests that the mature part of the marsh was shielded by a sand barrier from the open sea for decades. The supply with fine-grained sediments occurred from the marsh inlet through the tidal channels to the inner salt marsh. Radiometric dating (210Pb and 137Cs reveals that the sedimentation pattern changed fundamentally around the early-mid 1980s when the sedimentation rates increased sharply. By analyzing the photographic evidence, we found that the sand barrier was breached during storm events in the early 1980s. As a result, coarse-grained sediments were brought directly through this overwash from the sea to the mature part of the salt marsh and increased the sedimentation rates. We show that the overwash and the channels created by these storm events built a direct connection to the sea and reduced the distance to the sediment source which promoted salt marsh growth and a supply with coarse-grained sediments. Consequently, the original sediment input from the tidal channels is found to play a minor role in the years following the breach event. The presented study showcases the morphological development of a mature marsh, which contradicts the commonly accepted paradigm of decreasing sedimentation rates with increasing age of the marsh. We argue that similar trends are likely to be observed in other backbarrier marshes, developing in the shelter of unstabilized sand barriers. It further highlights the question of how resilient these salt marshes are toward sea level rise and how extreme storm events interfere in determining the resilience of a mature salt marsh.

Annual net ecosystem exchanges of carbon dioxide and methane from a temperate brackish marsh: should the focus of marsh restoration be on brackish environments?

Science.gov (United States)

Windham-Myers, L.; Anderson, F. E.; Bergamaschi, B. A.; Ferner, M. C.; Schile, L. M.; Spinelli, G.

2015-12-01

The exchange and transport of carbon in tidally driven, saline marsh ecosystems provide habitat and trophic support for coastal wildlife and fisheries, while potentially accumulating and storing carbon at some of the highest rates compared to other ecosystems. However, due to the predicted rise in sea level over the next century, the preservation and restoration of estuarine habitats is necessary to compensate for their expected decline. In addition, restoration of these marsh systems can also reduce the impacts of global climate change as they assimilate as much carbon as their freshwater counterparts, while emitting less methane due to the higher concentrations of sulfate in seawater. Unfortunately, in brackish marshes, with salinity concentrations less than 18 parts per thousand (ppt), simple relationships between methane production, salinity and sulfate concentrations are not well known. Here we present the net ecosystem exchange (NEE) of carbon dioxide and methane, as calculated by the eddy covariance method, from a brackish marsh ecosystem in the San Francisco Estuary where salinity ranges from oligohaline (0.5-5 ppt) to mesohaline (5-18 ppt) conditions. Daily rates of carbon dioxide and methane NEE ranged from approximately 10 gC-CO2 m-2 d-1 and 0 mgC-CH4 m-2 d-1, during the winter to -15 gC-CO2 m-2 d-1 and 30 mgC-CH4 m-2 d-1, in the summer growing season. A comparison between similar measurements made from freshwater wetlands in the Sacramento-San Joaquin Delta found that the daily rates of carbon dioxide NEE were similar, but daily rates of methane NEE were just a small fraction (0-15%). Our research also shows that the daily fluxes of carbon dioxide and methane at the brackish marsh were highly variable and may be influenced by the tidal exchanges of seawater. Furthermore, the observed decline in methane production from summer to fall may have resulted from a rise in salinity and/or a seasonal decline in water and air temperatures. Our research goals are

Glycogen accumulation in normal and irradiated minced muscle autografts on frog gastrocnemius

International Nuclear Information System (INIS)

Malhotra, R.K.; Kaul, R.; Malhotra, N.

1989-01-01

Alterations induced in glycogen content and phosphorylase activity have been studied in normal and irradiated minced muscle autografts on frog gastrocnemius at days 1, 3, 5, 7, 10, 15 and 30 postgrafting. The changes observed in the glycogen content and phosphorylase activity conform to the degeneration and regeneration phases of muscle repair. An attempt has been made to explain the altered glycogen utilizing capacities of the frog skeletal muscle during its repair and regeneration. (author)

Ichthyophonus sp. (Ichthyophonae, Ichthyophonida) infection in a South American amphibian, the hylid frog Hypsiboas pulchellus.

Science.gov (United States)

Borteiro, Claudio; Verdes, José Manuel; Cruz, Juan Carlos; Sabalsagaray, María Jesús; Kolenc, Francisco; Martínez Debat, Claudio; Ubilla, Martín

2015-04-01

We report infection by Ichthyophonus sp. in a South American amphibian, the hylid frog Hypsiboas pulchellus in Uruguay. This frog had a large subcutaneous mass over the urostyle and dorsal musculature comprised of parasitic cysts with mild granulomatous inflammation but otherwise appeared healthy.

First bioacoustic and morphological data for the presence of Pelophylax bedriagae in Bulgaria

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Lukanov Simeon

2018-03-01

Full Text Available Water frog mating calls from two localities were studied and analyzed. Recordings were made in the summer of 2010 at the Arkutino swamp near the town of Primorsko and at the Vurbitza River near the town of Momchilgrad. A total of 154 calls were analyzed and the results suggested the presence of both the Marsh frog (Pelophylax ridibundus and the Levant frog (Pelophylax bedriagae in both sites, with the former being more frequent in Vurbitza River, and the latter – in Arkutino. At Vurbitza, we also captured and measured 2 specimens, which morphological characteristics differed from P. ridibundus and matched those of P. bedriagae. These are the first localities for P. bedriagae in Bulgaria.

Traits of estuarine marsh plants affect wave dissipation

Science.gov (United States)

Schulte Ostermann, Tilla; Heuner, Maike; Bouma, Tjeerd

2017-04-01

Estuarine vegetation can attenuate hydrodynamic forces such as waves or flow velocities and therefore has an important role in natural tidal bank protection. This function depends on the degree of hydrodynamic forces, bank morphology and on plant traits of the dominant species. The traits vary between the species but also between different marsh sites. Biomass, stem density and biomechanical properties are crucial factors that influence the rate of wave dissipation. These properties illustrate the trade-offs a species is facing in such a dynamic habitat and highlight the ability of dominant species such as Bolboschoenus maritimus and Schoenoplectus tabernaemontani to protect the tidal bank. Along the Elbe estuary, traits of dominant marsh plant species were measured on different sites. The sites vary e.g. in their elevation, salt levels and inundation periods. To analyse the role that plant traits can play in wave dissipation, the structure of the vegetation as well as the composition was recorded. Biomechanical tests helped to understand the species traits regarding stem flexibility and to determine the effects of plant traits on wave dynamics and vice versa. On the conference, we will present how plant traits affect the wave dissipation on tidal marshes and why they vary.

Methane fluxes along a salinity gradient on a restored salt marsh, Harpswell, ME

Science.gov (United States)

Gunn, Cailene; Johnson, Beverly, ,, Dr.; Dostie, Phil; Bohlen, Curtis; Craig, Matthew

2016-04-01

This study functions as a pilot project to understand the relationship between salinity and methane emissions on a recently restored salt marsh in Casco Bay, Maine. Salt marshes are dynamic and highly productive ecosystems that provide a multitude of ecosystem services including nutrient filtration, storm-water buffering and carbon sequestration. These ecosystems are highly susceptible to anthropogenic alteration. The emplacement of causeways and narrow culverts, restricts tidal flow and leads to loss of healthy salinity gradients. Consequently, numerous salt marshes have experienced increases in freshwater vegetation growth as a result of coastal population expansion. Recent restoration efforts on Long Marsh, Harpswell, ME replaced a severely undersized culvert with a larger one in February, 2014. The salinity gradient has since been restored along much of the marsh, and freshwater vegetation that encroached on the marsh platform has died back. Vegetation and salinity are key indicators and drivers of CH4 emissions on salt marshes. Using static gas chambers, we quantified CH4 fluxes along two transects at five diverse sites ranging from healthy marsh (salinity of 27 to 31 psu) with Spartina vegetation, to regions invaded by Typha and other freshwater vegetation (salinity of 0 to 4 psu). Sampling was executed in the months of July, August and October. CH4 concentrations were determined using a gas chromatograph with a flame-ionization detector. Preliminary findings suggest reintroduction of healthy tidal flows into the marsh inhibits CH4 production, where the lowest fluxes with least variability were observed at the most saline sites with Spartina vegetation. The largest range of CH4 fluxes exhibited emissions from 0.75 μmol CH4/m2/hr to 518.4 μmol CH4/m2/hr at the Typha dominated sites from July to October. Fluxes at the saltwater and brackish regions were far less variable with ranges from 0.94 μmol CH4/m2/hr to 8.2 μmol CH4/m2/hr and 2.6 to 9.5 μmol CH4/m2

Salt marsh stability modelled in relation to sea level rise

DEFF Research Database (Denmark)

Bartholdy, Jesper; Bartholdy, Anders; Kroon, Aart

2010-01-01

thickness. Autocompaction was incorporated in the model, and shown to play a major role for the translation of accretion rates measured as length per unit time to accumulation rates measured as mass per area per unit time. This is important, even for shallow salt marsh deposits for which it is demonstrated...... that mass depth down core can be directly related to the bulk dry density of the surface layer by means of a logarithmic function. The results allow for an evaluation of the use of marker horizons in the topmost layers and show that it is important to know the level of the marker in relation to the salt...... marsh base. In general, deeper located markers will indicate successively smaller accretion rates with the same sediment input. Thus, stability analysis made on the basis of newly established marker horizons will be biased and indicate salt marsh stabilities far above the correct level. Running...

Common Marsh Plants of the United States and Canada. Resource Publication 93.

Science.gov (United States)

Hotchkiss, Neil

Described in this guide are the emergent and semiemergent plants most likely to be found in inland and coastal marshes. The guide is intended for field identification of marsh plants without resources to technical botanical keys. The plants are discussed in seven groups. Within each group the kinds which resemble one another most closely are next…

Use of olfactory cues by newly metamorphosed wood frogs (Lithobates sylvaticus) during emigration

Science.gov (United States)

Zydlewski, Joseph D.; Popescu, Viorel D.; Brodie, Bekka S.; Hunter, Malcom L.

2012-01-01

Juvenile amphibians are capable of long-distance upland movements, yet cues used for orientation during upland movements are poorly understood. We used newly metamorphosed Wood Frogs (Lithobates sylvaticus) to investigate: (1) the existence of innate (i.e., inherited) directionality, and (2) the use of olfactory cues, specifically forested wetland and natal pond cues during emigration. In a circular arena experiment, animals with assumed innate directionality did not orient in the expected direction (suggested by previous studies) when deprived of visual and olfactory cues. This suggests that juvenile Wood Frogs most likely rely on proximate cues for orientation. Animals reared in semi-natural conditions (1500 l cattle tanks) showed a strong avoidance of forested wetland cues in two different experimental settings, although they had not been previously exposed to such cues. This finding is contrary to known habitat use by adult Wood Frogs during summer. Juvenile Wood Frogs were indifferent to the chemical signature of natal pond (cattle tank) water. Our findings suggest that management strategies for forest amphibians should consider key habitat features that potentially influence the orientation of juveniles during emigration movements, as well as adult behavior.

Modeling Sexual Selection in Túngara Frog and Rationality of Mate Choice.

Science.gov (United States)

Vargas Bernal, Esteban; Sanabria Malagon, Camilo

2017-12-01

The males of the species of frogs Engystomops pustulosus produce simple and complex calls to lure females, as a way of intersexual selection. Complex calls lead males to a greater reproductive success than what simple calls do. However, the complex calls are also more attractive to their main predator, the bat Trachops cirrhosus. Therefore, as M. Ryan suggests in (The túngara frog: a study in sexual selection and communication. University of Chicago Press, Chicago, 1985), the complexity of the calls lets the frogs keep a trade-off between reproductive success and predation. In this paper, we verify this trade-off from the perspective of game theory. We first model the proportion of simple calls as a symmetric game of two strategies. We also model the effect of adding a third strategy, males that keep quiet and intercept females, which would play a role of intrasexual selection. Under the assumption that the decision of the males takes into account this trade-off between reproductive success and predation, our model reproduces the observed behavior reported in the literature with minimal assumption on the parameters. From the model with three strategies, we verify that the quiet strategy could only coexists with the simple and complex strategies if the rate at which quiet males intercept females is high, which explains the rarity of the quiet strategy. We conclude that the reproductive strategy of the male frog E. pustulosus is rational.

Methane emission from tidal freshwater marshes

NARCIS (Netherlands)

Van der Nat, F.J.; Middelburg, J.J.

2000-01-01

In two tidal freshwater marshes, methane emission, production and accumulation in the pore-water have been studied. The two sites differ in their dominant vegetation, i.e., reed and bulrush, and in their heights above sea level. The reed site was elevated in relation to the bulrush site and had

SpotADAPT

DEFF Research Database (Denmark)

Kaulakiene, Dalia; Thomsen, Christian; Pedersen, Torben Bach

2015-01-01

by Amazon Web Services (AWS). The users aiming for the spot market are presented with many instance types placed in multiple datacenters in the world, and thus it is difficult to choose the optimal deployment. In this paper, we propose the framework SpotADAPT (Spot-Aware (re-)Deployment of Analytical...... of typical analytical workloads and real spot price traces. SpotADAPT's suggested deployments are comparable to the theoretically optimal ones, and in particular, it shows good cost benefits for the budget optimization -- on average SpotADAPT is at most 0.3% more expensive than the theoretically optimal...

A forward-looking, national-scale remote sensing-based model of tidal marsh aboveground carbon stocks

Science.gov (United States)

Holmquist, J. R.; Byrd, K. B.; Ballanti, L.; Nguyen, D.; Simard, M.; Windham-Myers, L.; Thomas, N.

2017-12-01

Remote sensing based maps of tidal marshes, both of their extents and carbon stocks, have the potential to play a key role in conducting greenhouse gas inventories and implementing climate mitigation policies. Our goal was to generate a single remote sensing model of tidal marsh aboveground biomass and carbon that represents nationally diverse tidal marshes within the conterminous United States (CONUS). To meet this objective we developed the first national-scale dataset of aboveground tidal marsh biomass, species composition, and aboveground plant carbon content (%C) from six CONUS regions: Cape Cod, MA, Chesapeake Bay, MD, Everglades, FL, Mississippi Delta, LA, San Francisco Bay, CA, and Puget Sound, WA. Using the random forest algorithm we tested Sentinel-1 radar backscatter metrics and Landsat vegetation indices as predictors of biomass. The final model, driven by six Landsat vegetation indices and with the soil adjusted vegetation index as the most important (n=409, RMSE=310 g/m2, 10.3% normalized RMSE), successfully predicted biomass and carbon for a range of marsh plant functional types defined by height, leaf angle and growth form. Model error was reduced by scaling field measured biomass by Landsat fraction green vegetation derived from object-based classification of National Agriculture Imagery Program imagery. We generated 30m resolution biomass maps for estuarine and palustrine emergent tidal marshes as indicated by a modified NOAA Coastal Change Analysis Program map for each region. With a mean plant %C of 44.1% (n=1384, 95% C.I.=43.99% - 44.37%) we estimated mean aboveground carbon densities (Mg/ha) and total carbon stocks for each wetland type for each region. Louisiana palustrine emergent marshes had the highest C density (2.67 ±0.08 Mg/ha) of all regions, while San Francisco Bay brackish/saline marshes had the highest C density of all estuarine emergent marshes (2.03 ±0.06 Mg/ha). This modeling and data synthesis effort will allow for aboveground

Polychlorinated biphenyls in two salt marsh sediments of the Venice Lagoon.

Science.gov (United States)

Mugnai, Cristian; Giuliani, Silvia; Bellucci, Luca G; Carraro, Claudio; Favotto, Maurizio; Frignani, Mauro

2011-10-01

Polychlorinated biphenyls (PCBs) were measured in two dated salt marsh cores of the Venice Lagoon to assess their input chronology and to evaluate the importance of atmospheric deposition as a source. Sampling sites were chosen in order to evidence the differences between areas located leeward and windward with respect to inputs originating in both the city of Venice and the industrial area. Concentrations of PCB indicators (0.13-15.6 ng g⁻¹) increased gradually from the 1930s, reached maxima from the 1950s to the late 1970s, and then decreased. PCB loadings to marshes are driven by both the atmospheric deposition and the resuspension of subtidal sediments, this latter being more important for heavier congeners. The downwind marsh recorded higher fluxes (0.06-9.72 ng cm⁻² year⁻¹) than the upwind one (0.01-0.53 ng cm⁻² year⁻¹). Recent fluxes are rather consistent with bulk deposition measurements. A higher contribution of CB-101 and CB-118 was detected in the intermediate layers of the downwind site, suggesting a different PCB source for the corresponding time interval. In the other marsh, PCBs showed a rather constant composition at all levels (mostly CB-153, CB-138 and CB-180), accounting for a regional influence. Deep layers showed an enrichment of higher chlorinated congeners at both sites, whereas recent samples conserve the patterns typical of surficial and subsurficial subtidal sediments. The scientific approach adopted in this research can be considered as a sort of methodological procedure for the determination of fluxes and pathways of PCBs through the study of marsh cores.

Pesticide concentrations in frog tissue and wetland habitats in a landscape dominated by agriculture.

Science.gov (United States)

Smalling, Kelly L; Reeves, Rebecca; Muths, Erin; Vandever, Mark; Battaglin, William A; Hladik, Michelle L; Pierce, Clay L

2015-01-01

Habitat loss and exposure to pesticides are likely primary factors contributing to amphibian decline in agricultural landscapes. Conservation efforts have attempted to restore wetlands lost through landscape modifications to reduce contaminant loads in surface waters and providing quality habitat to wildlife. The benefits of this increased wetland area, perhaps especially for amphibians, may be negated if habitat quality is insufficient to support persistent populations. We examined the presence of pesticides and nutrients in water and sediment as indicators of habitat quality and assessed the bioaccumulation of pesticides in the tissue of two native amphibian species Pseudacris maculata (chorus frogs) and Lithobates pipiens (leopard frogs) at six wetlands (3 restored and 3 reference) in Iowa, USA. Restored wetlands are positioned on the landscape to receive subsurface tile drainage water while reference wetlands receive water from overland run-off and shallow groundwater sources. Concentrations of the pesticides frequently detected in water and sediment samples were not different between wetland types. The median concentration of atrazine in surface water was 0.2 μg/L. Reproductive abnormalities in leopard frogs have been observed in other studies at these concentrations. Nutrient concentrations were higher in the restored wetlands but lower than concentrations thought lethal to frogs. Complex mixtures of pesticides including up to 8 fungicides, some previously unreported in tissue, were detected with concentrations ranging from 0.08 to 1,500 μg/kg wet weight. No significant differences in pesticide concentrations were observed between species, although concentrations tended to be higher in leopard frogs compared to chorus frogs, possibly because of differences in life histories. Our results provide information on habitat quality in restored wetlands that will assist state and federal agencies, landowners, and resource managers in identifying and implementing

Habitat differentiation vs. isolation-by-distance : the genetic population structure of Elymus athericus in European salt marshes

NARCIS (Netherlands)

Bockelmann, AC; Reusch, TBH; Bijlsma, R; Bakker, JP

We investigated genetic differentiation among populations of the clonal grass Elymus athericus, a common salt-marsh species occurring along the Wadden Sea coast of Europe. While E. athericus traditionally occurs in the high salt marsh, it recently also invaded lower parts of the marsh. In one of the

Interference of a short-chain phospholipid with ion transport pathways in frog skin

DEFF Research Database (Denmark)

Unmack, M A; Frederiksen, O; Willumsen, N J

1997-01-01

The effects of mucosal application of the short-chain phospholipid didecanoyl-L-alpha-phosphatidylcholine (DDPC; with two saturated 10-carbon acyl chains) on active Na+ transport and transepithelial conductance (G) in the frog skin (Rana temporaria) were investigated. Active Na+ transport...... of the frog skin epithelium and opens a paracellular tight junction pathway. Both effects may be caused by incorporation of DDPC in the apical cell membrane....

Cadmium-induced oxidative stress and apoptosis in the testes of frog Rana limnocharis

Energy Technology Data Exchange (ETDEWEB)

Zhang Hangjun; Cai Chenchen; Shi Cailei; Cao Hui; Han Ziliu [Department of Environmental Sciences, Hangzhou Normal University, Xuelin Road 16, Xiasha Gaojiao Dongqu, Hangzhou, Zhejiang Province, 310036 (China); Jia Xiuying, E-mail: hznujiaxiuying@126.com [Department of Environmental Sciences, Hangzhou Normal University, Xuelin Road 16, Xiasha Gaojiao Dongqu, Hangzhou, Zhejiang Province, 310036 (China)

2012-10-15

Highlights: Black-Right-Pointing-Pointer Cd can cause vacuoles and deformity of the spermatogenic cells in the frog testes. Black-Right-Pointing-Pointer Cd can result in oxidative stress in the frog testes. Black-Right-Pointing-Pointer Cd can induce significantly increase of ROS contents triggered DNA damages in the frog testes. Black-Right-Pointing-Pointer Cd can cause apoptosis in the testes of male R. limnocharis. Black-Right-Pointing-Pointer Apoptosis by Cd in the frog testes is related to Caspase-3, Bax and Bcl-2 genes. - Abstract: This study explored the genetic damage induced by cadmium exposure in the testes of Rana limnocharis. Healthy adult frogs were exposed to 2.5, 5, 7.5, or 10 mg/L of cadmium solution for 14 days. The results showed that exposure to these concentrations increased the levels of reactive oxygen species and malondialdehyde content in the testes, clearly indicating a dose-effect relationship. Moreover, the same dosages of Cd{sup 2+} solution increased glutathione (reduced) content, with the values being significantly different from those observed in the control group (P < 0.01). The comet assay results demonstrated that the DNA damage rate, tail length, and tail moment of samples obtained from frogs exposed to 2.5-7.5 mg/L of cadmium solution significantly increased compared with those of samples obtained from the control group (P < 0.01). These findings suggest that cadmium can induce free radical generation, followed by lipid peroxidation and DNA damage. Ultrastructural observation revealed vacuoles in the spermatogenic cells, cell dispersion, incomplete cell structures, and deformed nucleoli. Moreover, cadmium exposure induced significant down-regulation of Bcl-2 expression and up-regulation of Bax and caspase-3 expressions. Taken together, these data indicate that cadmium can induce testicular cell apoptosis in R. limnocharis. Exploring the effects of cadmium on the mechanism of reproductive toxicity in amphibians will help provide a

Cadmium-induced oxidative stress and apoptosis in the testes of frog Rana limnocharis

International Nuclear Information System (INIS)

Zhang Hangjun; Cai Chenchen; Shi Cailei; Cao Hui; Han Ziliu; Jia Xiuying

2012-01-01

Highlights: ► Cd can cause vacuoles and deformity of the spermatogenic cells in the frog testes. ► Cd can result in oxidative stress in the frog testes. ► Cd can induce significantly increase of ROS contents triggered DNA damages in the frog testes. ► Cd can cause apoptosis in the testes of male R. limnocharis. ► Apoptosis by Cd in the frog testes is related to Caspase-3, Bax and Bcl-2 genes. - Abstract: This study explored the genetic damage induced by cadmium exposure in the testes of Rana limnocharis. Healthy adult frogs were exposed to 2.5, 5, 7.5, or 10 mg/L of cadmium solution for 14 days. The results showed that exposure to these concentrations increased the levels of reactive oxygen species and malondialdehyde content in the testes, clearly indicating a dose–effect relationship. Moreover, the same dosages of Cd 2+ solution increased glutathione (reduced) content, with the values being significantly different from those observed in the control group (P < 0.01). The comet assay results demonstrated that the DNA damage rate, tail length, and tail moment of samples obtained from frogs exposed to 2.5–7.5 mg/L of cadmium solution significantly increased compared with those of samples obtained from the control group (P < 0.01). These findings suggest that cadmium can induce free radical generation, followed by lipid peroxidation and DNA damage. Ultrastructural observation revealed vacuoles in the spermatogenic cells, cell dispersion, incomplete cell structures, and deformed nucleoli. Moreover, cadmium exposure induced significant down-regulation of Bcl-2 expression and up-regulation of Bax and caspase-3 expressions. Taken together, these data indicate that cadmium can induce testicular cell apoptosis in R. limnocharis. Exploring the effects of cadmium on the mechanism of reproductive toxicity in amphibians will help provide a scientific basis accounting for the global population decline in amphibian species.

Understanding Spatial and Temporal Shifts in Blue Carbon, Piermont Marsh, Lower Hudson Estuary, NY

Science.gov (United States)

Peteet, D. M.; Nichols, J. E.; Kenna, T. C.; Corbett, E. J.; Allen, K. A.; Newton, R.; Vincent, S.; Haroon, A.; Shumer, M.

2015-12-01

Piermont Marsh is a National Estuarine Research Reserve (NERR) protected brackish wetland in the lower Hudson Valley. It serves as a nursery for fish, a coastal buffer in storms, a repository of native wetland species unique to the Hudson, and a paleoenvironmental archive. At risk for disappearance due to rising sea level, we assess the present carbon stores and their spatial and temporal variability through time. Determining the depth of peat in transects throughout Piermont Marsh (41°N, 73°55'W), is one step in reconstructing the stores of carbon in the marsh and how they have shifted over millennia. Through the last decade, we have focused field efforts on probing the depths of the marsh through a series of transects and in acquiring sediment cores from which we establish sedimentation rates and carbon storage through time. AMS C-14 dating, XRF fluorescence, pollen analysis, and Cesium-137 provide chronological control for the sedimentation rates, pollution history, and an understanding of the regional and local shifts in vegetation. C-13 and pollen measurements in selected cores indicate major shifts in local vegetation with coastal eutrophication as the marsh has been invaded, first by Typha angustifolia in the nineteenth century and then by Phragmites australis in the twentieth century up to the present. N-15 measurements indicate a large shift in nitrogen as humans have impacted the marsh. We present a comprehensive, three-dimensional view of the effects of climate, vegetation, and human impact on the carbon storage of Piermont Marsh. This project provided a site for a place- and project-based learning through Lamont-Doherty's Secondary School Field Research Program. Many of the field samples were collected by young investigators from schools in New York City and towns near Piermont.

Oral chytridiomycosis in the mountain yellow-legged frog (Rana muscosa)

Science.gov (United States)

Fellers, G.M.; Green, E.D.; Longcore, J.E.

2001-01-01

The chytrid fungus Batrachochytrium dendrobatidis was originally reported in wild frog populations in Panama and Australia, and from captive frogs in the U.S. National Zoological Park (Washington, DC). This recently described fungus affects the keratinized epidermis of amphibians and has been implicated as a causative factor in the declines of frog populations. We report here the presence of B. dendrobatidis in larval and recently metamorphosed mountain yellow-legged frogs (Rana muscosa) in or near the Sierra Nevada Mountains of California, an area where declines have been documented in all five species of native anurans. Forty-one percent (158 of 387) of larval R. muscosa examined in the field with a hand lens and 18% (14 of 79) of preserved larvae had abnormalities of the oral disc. Twenty-eight larvae were collected from 10 sites where tadpoles had been observed with missing or abnormally keratinized mouthparts, and 24 of these were examined for infection. Sixty-seven percent (16 of 24) of these tadpoles were infected with B. dendrobatidis. Batrachochytrium dendrobatidis was cultured from both tadpoles and recent metamorphs from one of these sites. Tadpoles with mouthpart abnormalities or confirmed chytrid fungus infections were collected at 23 sites spanning a distance of > 440 km and an elevational range from 1658-3550 m. Life-history traits of R. muscosa may make this species particularly susceptible to infection by Batrachochytrium. We recommend that biologists examine tadpoles for oral disc abnormalities as a preliminary indication of chytridiomycosis. Further, we believe that biologists should take precautions to prevent spreading this and other amphibian diseases from one site to another.

Maine belowground marsh destruction from the European green crab documented by computer-aided tomography

Science.gov (United States)

Invasive European green crab (Carcinus maenus) populations have exploded with devastating losses to Maine’s intertidal resources including soft-shell clams, eelgrass beds, and salt marshes. This project quantified the green crab abundance in three different marsh locations ...

Salt-marsh restoration : evaluating the success of de-embankments in north-west Europe

NARCIS (Netherlands)

Wolters, M; Garbutt, A; Bakker, JP

De-embankment of historically reclaimed salt marshes has become a widespread option for re-creating salt marshes, but to date little information exists on the success of de-embankments. One reason is the absence of pre-defined targets, impeding the measurement of success. In this review, success has

Reflex Marine celebrates 10. anniversary of FROG crew transfer device

Energy Technology Data Exchange (ETDEWEB)

Anon.

2010-07-15

Reflex Marine developed the initial 3-person FROG crew transfer device in response to the main risks identified from incidents involving traditional rope baskets for personnel transfer: falling, collisions, hard landings, and immersion. To address these issues, the FROG was developed with 4-point harnesses, a protective shell, shock-absorbing landing feet, and self-righting capability. As a result of industry demand for a higher capacity transfer device, the company introduced 6- and 9-man versions of the FROG. The perceptions and reality of marine transfers have changed greatly over the past decade, from the design of the device to vessel specifications and increased focus on crane operations. Marine transfers offer a low-risk alternative to helicopter transfers. The TORO, a low-cost crew transfer capsule launched in February 2009, fits into a standard shipping container, providing significant logistical advantages. The TORO can carry 4 passengers, offer protection from side impacts and hard landings, and is buoyant and self-righting. Most of the units are being used by major oil and gas companies, but offshore wind turbines are an emerging source of demand for the crew transfer system. 3 figs.

Cytological maps of lampbrush chromosomes of European water frogs (Pelophylax esculentus complex) from the Eastern Ukraine

Science.gov (United States)

2013-01-01

Background Hybridogenesis (hemiclonal inheritance) is a kind of clonal reproduction in which hybrids between parental species are reproduced by crossing with one of the parental species. European water frogs (Pelophylax esculentus complex) represent an appropriate model for studying interspecies hybridization, processes of hemiclonal inheritance and polyploidization. P. esculentus complex consists of two parental species, P. ridibundus (the lake frog) and P. lessonae (the pool frog), and their hybridogenetic hybrid – P. esculentus (the edible frog). Parental and hybrid frogs can reproduce syntopically and form hemiclonal population systems. For studying mechanisms underlying the maintenance of water frog population systems it is required to characterize the karyotypes transmitted in gametes of parental and different hybrid animals of both sexes. Results In order to obtain an instrument for characterization of oocyte karyotypes in hybrid female frogs, we constructed cytological maps of lampbrush chromosomes from oocytes of both parental species originating in Eastern Ukraine. We further identified certain molecular components of chromosomal marker structures and mapped coilin-rich spheres and granules, chromosome associated nucleoli and special loops accumulating splicing factors. We recorded the dissimilarities between P. ridibundus and P. lessonae lampbrush chromosomes in the length of orthologous chromosomes, number and location of marker structures and interstitial (TTAGGG)n-repeat sites as well as activity of nucleolus organizer. Satellite repeat RrS1 was mapped in centromere regions of lampbrush chromosomes of the both species. Additionally, we discovered transcripts of RrS1 repeat in oocytes of P. ridibundus and P. lessonae. Moreover, G-rich transcripts of telomere repeat were revealed in association with terminal regions of P. ridibundus and P. lessonae lampbrush chromosomes. Conclusions The constructed cytological maps of lampbrush chromosomes of P

Effects of oxymorphazone in frogs: long lasting antinociception in vivo, and apparently irreversible binding in vitro

Energy Technology Data Exchange (ETDEWEB)

Benyhe, S.; Hoffman, G.; Varga, E.; Hosztafi, S.; Toth, G.; Borsodi, A.; Wollemann, M.

1989-01-01

Oxymorphazone was found to be a relatively weak antinociceptive drug in intact frog (Rana esculenta) when acetic acid was used as pain stimulus. Frogs remained analgesic for at least 48 hrs following oxymorphazone administration. The ligand increased the latency of wiping reflex in spinal frogs too. There effects were blocked by naloxone. In equilibrium binding studies (/sup 3/H)oxymorphazone had high affinity to the opioid receptors of frog brain and spinal cord as well. Kinetic experiments show that only 25% of the bound (/sup 3/H)oxymorphazone is readily dissociable. Preincubation of the membranes with labeled oxymorphazone results in a washing resistant inhibition of the opioid binding sites. At least 70% of the (/sup 3/H)oxymorphazone specific binding is apparently irreversible after reaction at 5 nM ligand concentration, and this can be enhanced by a higher concentration of tritiated ligand.

The Genome of the Western Clawed Frog Xenopus tropicalis

Energy Technology Data Exchange (ETDEWEB)

Hellsten, Uffe; Harland, Richard M.; Gilchrist, Michael J.; Hendrix, David; Jurka, Jerzy; Kapitonov, Vladimir; Ovcharenko, Ivan; Putnam, Nicholas H.; Shu, Shengqiang; Taher, Leila; Blitz, Ira L.; Blumberg, Bruce; Dichmann, Darwin S.; Dubchak, Inna; Amaya, Enrique; Detter, John C.; Fletcher, Russell; Gerhard, Daniela S.; Goodstein, David; Graves, Tina; Grigoriev, Igor V.; Grimwood, Jane; Kawashima, Takeshi; Lindquist, Erika; Lucas, Susan M.; Mead, Paul E.; Mitros, Therese; Ogino, Hajime; Ohta, Yuko; Poliakov, Alexander V.; Pollet, Nicolas; Robert, Jacques; Salamov, Asaf; Sater, Amy K.; Schmutz, Jeremy; Terry, Astrid; Vize, Peter D.; Warren, Wesley C.; Wells, Dan; Wills, Andrea; Wilson, Richard K.; Zimmerman, Lyle B.; Zorn, Aaron M.; Grainger, Robert; Grammer, Timothy; Khokha, Mustafa K.; Richardson, Paul M.; Rokhsar, Daniel S.

2009-10-01

The western clawed frog Xenopus tropicalis is an important model for vertebrate development that combines experimental advantages of the African clawed frog Xenopus laevis with more tractable genetics. Here we present a draft genome sequence assembly of X. tropicalis. This genome encodes over 20,000 protein-coding genes, including orthologs of at least 1,700 human disease genes. Over a million expressed sequence tags validated the annotation. More than one-third of the genome consists of transposable elements, with unusually prevalent DNA transposons. Like other tetrapods, the genome contains gene deserts enriched for conserved non-coding elements. The genome exhibits remarkable shared synteny with human and chicken over major parts of large chromosomes, broken by lineage-specific chromosome fusions and fissions, mainly in the mammalian lineage.

Vegetation engineers marsh morphology through multiple competing stable states

Science.gov (United States)

Marani, Marco; Da Lio, Cristina; D’Alpaos, Andrea

2013-01-01

Marshes display impressive biogeomorphic features, such as zonation, a mosaic of extensive vegetation patches of rather uniform composition, exhibiting sharp transitions in the presence of extremely small topographic gradients. Although generally associated with the accretion processes necessary for marshes to keep up with relative sea level rise, competing environmental constraints, and ecologic controls, zonation is still poorly understood in terms of the underlying biogeomorphic mechanisms. Here we find, through observations and modeling interpretation, that zonation is the result of coupled geomorphological–biological dynamics and that it stems from the ability of vegetation to actively engineer the landscape by tuning soil elevation within preferential ranges of optimal adaptation. We find multiple peaks in the frequency distribution of observed topographic elevation and identify them as the signature of biologic controls on geomorphodynamics through competing stable states modulated by the interplay of inorganic and organic deposition. Interestingly, the stable biogeomorphic equilibria correspond to suboptimal rates of biomass production, a result coherent with recent observations. The emerging biogeomorphic structures may display varying degrees of robustness to changes in the rate of sea level rise and sediment availability, with implications for the overall resilience of marsh ecosystems to climatic changes. PMID:23401529

Hind limb malformations in free-living northern leopard frogs (Rana pipiens) from Maine, Minnesota, and Vermont suggest multiple etiologies

Science.gov (United States)

Meteyer, C.U.; Loeffler, I.K.; Fallon, J.F.; Converse, K.A.; Green, E.; Helgen, J.C.; Kersten, S.; Levey, R.; Eaton-Poole, L.; Burkhart, J.G.

2000-01-01

Background Reports of malformed frogs have increased throughout the North American continent in recent years. Most of the observed malformations have involved the hind limbs. The goal of this study was to accurately characterize the hind limb malformations in wild frogs as an important step toward understanding the possible etiologies. Methods During 1997 and 1998, 182 recently metamorphosed northern leopard frogs (Rana pipiens) were collected from Minnesota, Vermont, and Maine. Malformed hind limbs were present in 157 (86%) of these frogs, which underwent necropsy and radiographic evaluation at the National Wildlife Health Center. These malformations are described in detail and classified into four major categories: (1) no limb (amelia); (2) multiple limbs or limb elements (polymelia, polydactyly, polyphalangy); (3) reduced limb segments or elements (phocomelia, ectromelia, ectrodactyly, and brachydactyly; and (4) distally complete but malformed limb (bone rotations, bridging, skin webbing, and micromelia). Results Amelia and reduced segments and/or elements were the most common finding. Frogs with bilateral hind limb malformations were not common, and in only eight of these 22 frogs were the malformations symmetrical. Malformations of a given type tended to occur in frogs collected from the same site, but the types of malformations varied widely among all three states, and between study sites within Minnesota. Conclusions Clustering of malformation type suggests that developmental events may produce a variety of phenotypes depending on the timing, sequence, and severity of the environmental insult. Hind limb malformations in free-living frogs transcend current mechanistic explanations of tetrapod limb development.

Seasonal variation in apparent conductivity and soil salinity at two Narragansett Bay salt marshes

Science.gov (United States)

Measurement of the apparent conductivity of salt marsh sediments using electromagnetic induction (EMI) is a rapid alternative to traditional methods of salinity determination that can be used to map soil salinity across a marsh surface. Soil salinity measures can provide informat...

Metabolomic profiling of Green Frogs exposed to Mixed Pesticides

Data.gov (United States)

U.S. Environmental Protection Agency — GC/MS data from the metabolomic profiling of green frog livers after exposure to pesticides and their mixtures. This dataset is associated with the following...

Aquatic Insects of New York Salt Marsh Associated with Mosquito Larval Habitat and their Potential Utility as Bioindicators

OpenAIRE

Rochlin, Ilia; Dempsey, Mary E.; Iwanejko, Tom; Ninivaggi, Dominick V.

2011-01-01

The aquatic insect fauna of salt marshes is poorly characterized, with the possible exception of biting Diptera. Aquatic insects play a vital role in salt marsh ecology, and have great potential importance as biological indicators for assessing marsh health. In addition, they may be impacted by measures to control mosquitoes such as changes to the marsh habitat, altered hydrology, or the application of pesticides. Given these concerns, the goals of this study were to conduct the first taxonom...

Regulation of 5'-adenosine monophosphate deaminase in the freeze tolerant wood frog, Rana sylvatica.

Science.gov (United States)

Dieni, Christopher A; Storey, Kenneth B

2008-04-22

The wood frog, Rana sylvatica, is one of a few vertebrate species that have developed natural freeze tolerance, surviving days or weeks with 65-70% of its total body water frozen in extracellular ice masses. Frozen frogs exhibit no vital signs and their organs must endure multiple stresses, particularly long term anoxia and ischemia. Maintenance of cellular energy supply is critical to viability in the frozen state and in skeletal muscle, AMP deaminase (AMPD) plays a key role in stabilizing cellular energetics. The present study investigated AMPD control in wood frog muscle. Wood frog AMPD was subject to multiple regulatory controls: binding to subcellular structures, protein phosphorylation, and effects of allosteric effectors, cryoprotectants and temperature. The percentage of bound AMPD activity increased from 20 to 35% with the transition to the frozen state. Bound AMPD showed altered kinetic parameters compared with the free enzyme (S0.5 AMP was reduced, Hill coefficient fell to approximately 1.0) and the transition to the frozen state led to a 3-fold increase in S0.5 AMP of the bound enzyme. AMPD was a target of protein phosphorylation. Bound AMPD from control frogs proved to be a low phosphate form with a low S0.5 AMP and was phosphorylated in incubations that stimulated PKA, PKC, CaMK, or AMPK. Bound AMPD from frozen frogs was a high phosphate form with a high S0.5 AMP that was reduced under incubation conditions that stimulated protein phosphatases. Frog muscle AMPD was activated by Mg.ATP and Mg.ADP and inhibited by Mg.GTP, KCl, NaCl and NH4Cl. The enzyme product, IMP, uniquely inhibited only the bound (phosphorylated) enzyme from muscle of frozen frogs. Activators and inhibitors differentially affected the free versus bound enzyme. S0.5 AMP of bound AMPD was also differentially affected by high versus low assay temperature (25 vs 5 degrees C) and by the presence/absence of the natural cryoprotectant (250 mM glucose) that accumulates during freezing

Characterization of kappa 1 and kappa 2 opioid binding sites in frog (Rana esculenta) brain membrane preparation

Energy Technology Data Exchange (ETDEWEB)

Benyhe, S.; Varga, E.; Hepp, J.; Magyar, A.; Borsodi, A.; Wollemann, M.

1990-09-01

The distribution and properties of frog brain kappa-opioid receptor subtypes differ not only from those of the guinea pig brain, but also from that of the rat brain. In guinea pig cerebellum the kappa 1 is the dominant receptor subtype, frog brain contains mainly the kappa 2 subtype, and the distribution of the rat brain subtypes is intermediate between the two others. In competition experiments it has been established that ethylketocyclazocine and N-cyclopropylmethyl-norazidomorphine, which are nonselective kappa-ligands, have relatively high affinities to frog brain membranes. The kappa 2 ligands (Met5)enkephalin-Arg6-Phe7 and etorphine also show high affinities to the frog brain. Kappa 1 binding sites measured in the presence of 5 microM/D-Ala2-Leu5/enkephalin represent 25-30% of (3H)ethylketocyclazocine binding in frog brain membranes. The kappa 2 subtype in frog brain resembles more to the mu subtype than the delta subtype of opioid receptors, but it differs from the mu subtype in displaying low affinity toward beta-endorphin and /D-Ala2-(Me)Phe4-Gly5-ol/enkephalin (DAGO). From our data it is evident that the opioid receptor subtypes are already present in the amphibian brain but the differences among them are less pronounced than in mammalian brain.

Characterization of kappa 1 and kappa 2 opioid binding sites in frog (Rana esculenta) brain membrane preparation

International Nuclear Information System (INIS)

Benyhe, S.; Varga, E.; Hepp, J.; Magyar, A.; Borsodi, A.; Wollemann, M.

1990-01-01

The distribution and properties of frog brain kappa-opioid receptor subtypes differ not only from those of the guinea pig brain, but also from that of the rat brain. In guinea pig cerebellum the kappa 1 is the dominant receptor subtype, frog brain contains mainly the kappa 2 subtype, and the distribution of the rat brain subtypes is intermediate between the two others. In competition experiments it has been established that ethylketocyclazocine and N-cyclopropylmethyl-norazidomorphine, which are nonselective kappa-ligands, have relatively high affinities to frog brain membranes. The kappa 2 ligands (Met5)enkephalin-Arg6-Phe7 and etorphine also show high affinities to the frog brain. Kappa 1 binding sites measured in the presence of 5 microM/D-Ala2-Leu5/enkephalin represent 25-30% of [3H]ethylketocyclazocine binding in frog brain membranes. The kappa 2 subtype in frog brain resembles more to the mu subtype than the delta subtype of opioid receptors, but it differs from the mu subtype in displaying low affinity toward beta-endorphin and /D-Ala2-(Me)Phe4-Gly5-ol/enkephalin (DAGO). From our data it is evident that the opioid receptor subtypes are already present in the amphibian brain but the differences among them are less pronounced than in mammalian brain

Microspatial ecotone dynamics at a shifting range limit: plant-soil variation across salt marsh-mangrove interfaces.

Science.gov (United States)

Yando, E S; Osland, M J; Hester, M W

2018-05-01

Ecotone dynamics and shifting range limits can be used to advance our understanding of the ecological implications of future range expansions in response to climate change. In the northern Gulf of Mexico, the salt marsh-mangrove ecotone is an area where range limits and ecotone dynamics can be studied in tandem as recent decreases in winter temperature extremes have allowed for mangrove expansion at the expense of salt marsh. In this study, we assessed aboveground and belowground plant-soil dynamics across the salt marsh-mangrove ecotone quantifying micro-spatial patterns in horizontal extent. Specifically, we studied vegetation and rooting dynamics of large and small trees, the impact of salt marshes (e.g. species and structure) on mangroves, and the influence of vegetation on soil properties along transects from underneath the mangrove canopy into the surrounding salt marsh. Vegetation and rooting dynamics differed in horizontal reach, and there was a positive relationship between mangrove tree height and rooting extent. We found that the horizontal expansion of mangrove roots into salt marsh extended up to eight meters beyond the aboveground boundary. Variation in vegetation structure and local hydrology appear to control mangrove seedling dynamics. Finally, soil carbon density and organic matter did not differ within locations across the salt marsh-mangrove interface. By studying aboveground and belowground variation across the ecotone, we can better predict the ecological effects of continued range expansion in response to climate change.

Community structure and abundance of benthic infaunal invertebrates in Maine fringing marsh ecosystems

Science.gov (United States)

Richard A. MacKenzie; Michele Dionne; Jeremy Miller; Michael Haas; Pamela A. Morgan

2015-01-01

Fringing marshes are abundant ecosystems that dominate the New England coastline. Despite their abundance, very little baseline data is available from them and few studies have documented the ecosystems services that they provide. This information is important for conservation efforts as well as for an increased understanding of how fringing marshes function compared...

Monitoring duration and extent of storm-surge and flooding in Western Coastal Louisiana marshes with Envisat ASAR data

Science.gov (United States)

Ramsey, E.; Lu, Z.; Suzuoki, Y.; Rangoonwala, A.; Werle, D.

2011-01-01

Inundation maps of coastal marshes in western Louisiana were created with multitemporal Envisat Advanced Synthetic Aperture (ASAR) scenes collected before and during the three months after Hurricane Rita landfall in September 2005. Corroborated by inland water-levels, 7 days after landfall, 48% of coastal estuarine and palustrine marshes remained inundated by storm-surge waters. Forty-five days after landfall, storm-surge inundated 20% of those marshes. The end of the storm-surge flooding was marked by an abrupt decrease in water levels following the passage of a storm front and persistent offshore winds. A complementary dramatic decrease in flood extent was confirmed by an ASAR-derived inundation map. In nonimpounded marshes at elevations ;80 cm during the first month after Rita landfall. After this initial period, drainage from marshes-especially impounded marshes-was hastened by the onset of offshore winds. Following the abrupt drops in inland water levels and flood extent, rainfall events coinciding with increased water levels were recorded as inundation re-expansion. This postsurge flooding decreased until only isolated impounded and palustrine marshes remained inundated. Changing flood extents were correlated to inland water levels and largely occurred within the same marsh regions. Trends related to incremental threshold increases used in the ASAR change-detection analyses seemed related to the preceding hydraulic and hydrologic events, and VV and HH threshold differences supported their relationship to the overall wetland hydraulic condition.

Storm surges and climate change implications for tidal marshes: Insight from the San Francisco Bay Estuary, California, USA

Science.gov (United States)

Thorne, Karen M.; Buffington, Kevin J.; Swanson, Kathleen; Takekawa, John Y.

2013-01-01

Tidal marshes are dynamic ecosystems, which are influenced by oceanic and freshwater processes and daily changes in sea level. Projected sea-level rise and changes in storm frequency and intensity will affect tidal marshes by altering suspended sediment supply, plant communities, and the inundation duration and depth of the marsh platform. The objective of this research was to evaluate if regional weather conditions resulting in low-pressure storms changed tidal conditions locally within three tidal marshes. We hypothesized that regional storms will increase sea level heights locally, resulting in increased inundation of the tidal marsh platform and plant communities. Using site-level measurements of elevation, plant communities, and water levels, we present results from two storm events in 2010 and 2011 from the San Francisco Bay Estuary (SFBE), California, USA. The January 2010 storm had the lowest recorded sea level pressure in the last 30 years for this region. During the storm episodes, the duration of tidal marsh inundation was 1.8 and 3.1 times greater than average for that time of year, respectively. At peak storm surges, over 65% in 2010 and 93% in 2011 of the plant community was under water. We also discuss the implications of these types of storms and projected sea-level rise on the structure and function of the tidal marshes and how that will impact the hydro-geomorphic processes and marsh biotic communities.

Estimates of future inundation of salt marshes in response to sea-level rise in and around Acadia National Park, Maine

Science.gov (United States)

Nielsen, Martha G.; Dudley, Robert W.

2013-01-01

Salt marshes are ecosystems that provide many important ecological functions in the Gulf of Maine. The U.S. Geological Survey investigated salt marshes in and around Acadia National Park from Penobscot Bay to the Schoodic Peninsula to map the potential for landward migration of marshes using a static inundation model of a sea-level rise scenario of 60 centimeters (cm; 2 feet). The resulting inundation contours can be used by resource managers to proactively adapt to sea-level rise by identifying and targeting low-lying coastal areas adjacent to salt marshes for conservation or further investigation, and to identify risks to infrastructure in the coastal zone. For this study, the mapping of static inundation was based on digital elevation models derived from light detection and ranging (LiDAR) topographic data collected in October 2010. Land-surveyed control points were used to evaluate the accuracy of the LiDAR data in the study area, yielding a root mean square error of 11.3 cm. An independent accuracy assessment of the LiDAR data specific to salt-marsh land surfaces indicated a root mean square error of 13.3 cm and 95-percent confidence interval of ± 26.0 cm. LiDAR-derived digital elevation models and digital color aerial photography, taken during low tide conditions in 2008, with a pixel resolution of 0.5 meters, were used to identify the highest elevation of the land surface at each salt marsh in the study area. Inundation contours for 60-cm of sea-level rise were delineated above the highest marsh elevation for each marsh. Confidence interval contours (95-percent,± 26.0 cm) were delineated above and below the 60-cm inundation contours, and artificial structures, such as roads and bridges, that may present barriers to salt-marsh migration were mapped. This study delineated 114 salt marshes totaling 340 hectares (ha), ranging in size from 0.11 ha (marshes less than 0.2 ha were mapped only if they were on Acadia National Park property) to 52 ha, with a median

Final report: Initial ecosystem response of salt marshes to ditch plugging and pool creation: Experiments at Rachel Carson National Wildlife Refuge (Maine)

Science.gov (United States)

Adamowicz, S.C.; Roman, C.T.

2002-01-01

This study evaluates the response of three salt marshes, associated with the Rachel Carson National Wildlife Refuge (Maine), to the practice of ditch plugging. Drainage ditches, originally dug to drain the marsh for mosquito control or to facilitate salt hay farming, are plugged with marsh peat in an effort to impound water upstream of the plug, raise water table levels in the marsh, and increase surface water habitat. At two study sites, Moody Marsh and Granite Point Road Marsh, ditch plugs were installed in spring 2000. Monitoring of hydrology, vegetation, nekton and bird utilization, and marsh development processes was conducted in 1999, before ditch plugging, and then in 2000 and 2001 (all parameters except nekton), after ditch plugging. Each study site had a control marsh that was monitored simultaneously with the plugged marsh, and thus, we employed a BACI study design (before, after, control, impact). A third site, Marshall Point Road Marsh, was plugged in 1998. Monitoring of the plugged and control sites was conducted in 1999 and 2000, with limited monitoring in 2001, thus there was no ?before? plug monitoring. With ditch plugging, water table levels increased toward the marsh surface and the areal extent of standing water increased. Responding to a wetter substrate, a vegetation change from high marsh species (e.g., Spartina patens) to those more tolerant of flooded conditions (e.g., Spartina alterniflora) was noted at two of the three ditch plugged sites. Initial response of the nekton community (fishes and decapod crustaceans) was evaluated by monitoring utilization of salt marsh pools using a 1m2 enclosure trap. In general, nekton species richness, density, and community structure remained unchanged following ditch plugging at the Moody and Granite Point sites. At Marshall Point, species richness and density (number of individuals per m2) were significantly greater in the experimental plugged marsh than the control marsh (<2% of the control marsh was

Medicinal use of secretions (“the frog vaccine” from the kambô frog (Phyllomedusa bicolor by non-indigenous peoples in Rondônia, Brazil

Directory of Open Access Journals (Sweden)

Paulo Sérgio Bernarde

2009-09-01

Full Text Available Amphibians have pharmaceutically active skin secretions that protect against infections and predation. Some indigenous people in southwestern Amazonia use these secretions from P. bicolor for medicinal purposes. While the use of these secretions by indigenous people is relatively well-known, the use by non-indigenous peoples is very poorly studied. Here we describe the use of the “frog vaccine” by non-indigenous populations in the Brazilian state of Rondônia. Thirty-one people who had received this “vaccine” were interviewed. The use of this vaccine is not typical or habitual in this region, and the person who administers the vaccine must travel from another part of Amazonia. Users of the vaccine come from middle and upper social classes with reasonable levels of education (primary, secondary and university. Approximately half the people vaccinated felt that their health had improved after vaccination and if need be, they would take the vaccination again. Most of the people do not know the frog species from which the secretions are taken. While the people who use this treatment believe that it is good for any infirmity, the medicinal properties, if any, of the “frog vaccine” are under study and are still unknown.

Improving salt marsh digital elevation model accuracy with full-waveform lidar and nonparametric predictive modeling

Science.gov (United States)

Rogers, Jeffrey N.; Parrish, Christopher E.; Ward, Larry G.; Burdick, David M.

2018-03-01

Salt marsh vegetation tends to increase vertical uncertainty in light detection and ranging (lidar) derived elevation data, often causing the data to become ineffective for analysis of topographic features governing tidal inundation or vegetation zonation. Previous attempts at improving lidar data collected in salt marsh environments range from simply computing and subtracting the global elevation bias to more complex methods such as computing vegetation-specific, constant correction factors. The vegetation specific corrections can be used along with an existing habitat map to apply separate corrections to different areas within a study site. It is hypothesized here that correcting salt marsh lidar data by applying location-specific, point-by-point corrections, which are computed from lidar waveform-derived features, tidal-datum based elevation, distance from shoreline and other lidar digital elevation model based variables, using nonparametric regression will produce better results. The methods were developed and tested using full-waveform lidar and ground truth for three marshes in Cape Cod, Massachusetts, U.S.A. Five different model algorithms for nonparametric regression were evaluated, with TreeNet's stochastic gradient boosting algorithm consistently producing better regression and classification results. Additionally, models were constructed to predict the vegetative zone (high marsh and low marsh). The predictive modeling methods used in this study estimated ground elevation with a mean bias of 0.00 m and a standard deviation of 0.07 m (0.07 m root mean square error). These methods appear very promising for correction of salt marsh lidar data and, importantly, do not require an existing habitat map, biomass measurements, or image based remote sensing data such as multi/hyperspectral imagery.

Surveys for California red-legged frog and arroyo toad on the Los Padres National Forest

Science.gov (United States)

Valerie K. Hubbartt; Thomas G. Murphey

2005-01-01

Starting in the spring of 1999 through the fall of 2000, USDA Forest Service biologists have conducted surveys throughout the Los Padres National Forest for the federally-listed California red-legged frog (Rana aurora draytonii) and arroyo toad (Bufo californicus). Sites known to have frogs or toads present were monitored for...

A comparative study of charge movement in rat and frog skeletal muscle fibres.

Science.gov (United States)

Hollingworth, S; Marshall, M W

1981-12-01

1. The middle of the fibre voltage--clamp technique (Adrian & Marshall, 1977), modified where necessary for electrically short muscle fibres, has been used to measure non-linear charge movements in mammalian fast twitch (rat extensor digitorum longus), mammalian slow twitch (rat soleus) and frog (sartorius) muscles. 2. The maximum amount of charge moved in mammalian fast twitch muscle at 2 degrees C in hypertonic solution, was 3--5 times greater than in slow twitch muscle. The voltage distribution of fast twitch charge was 10--15 mV more positive when compared to slow twitch. 3. In both mammalian muscle types hypertonic Ringer solution negatively shifted the voltage distribution of charge some 6 mV. The steepness of charge moved around mechanical threshold was unaffected by hypertonicity. 4. The amount of charge in frog sartorius fibres at 2 degrees C in hypertonic solution was about half of that in rat fast twitch muscle; the voltage distribution of the frog charge was similar to rat soleus muscle. 5. Warming between 2 and 15 degrees C had no effect on either the amount of steady-state distribution of charge in mammalian or frog muscles. 6. At 2 degrees C, the kinetics of charge movement in fast and slow twitch mammalian muscles were similar and 2--3 times faster than frog muscle at the same temperature. In fast and slow mammalian fibres at 2 degrees C similar times were taken to shift the same fractions of the total amount of charge. The Q10 of charge movement kinetics was between 1.2 and 2.0 in the three muscles studied.

Electrophysiological evidence for an ATP-gated ion channel in the principal cells of the frog skin epithelium

DEFF Research Database (Denmark)

Brodin, Birger; Nielsen, Robert

2000-01-01

P2X receptor, Na+ absorption, Short circuit current, Cell potential, Microelectrodes, Frog skin, Cytosolic Ca2+......P2X receptor, Na+ absorption, Short circuit current, Cell potential, Microelectrodes, Frog skin, Cytosolic Ca2+...

Pesticides and Population Declines of California Alpine Frogs

Science.gov (United States)

Airborne pesticides from the Central Valley of California have been implicated as a cause for population declines of several amphibian species, with the strongest evidence for the mountain yellow-legged frog complex (Rana muscosa and R. sierrae) in the Sierra Nevada. We measured ...

A remote sensing-based model of tidal marsh aboveground carbon stocks for the conterminous United States

Science.gov (United States)

Byrd, Kristin B.; Ballanti, Laurel; Thomas, Nathan; Nguyen, Dung; Holmquist, James R.; Simard, Marc; Windham-Myers, Lisamarie

2018-05-01

Remote sensing based maps of tidal marshes, both of their extents and carbon stocks, have the potential to play a key role in conducting greenhouse gas inventories and implementing climate mitigation policies. Our objective was to generate a single remote sensing model of tidal marsh aboveground biomass and carbon that represents nationally diverse tidal marshes within the conterminous United States (CONUS). We developed the first calibration-grade, national-scale dataset of aboveground tidal marsh biomass, species composition, and aboveground plant carbon content (%C) from six CONUS regions: Cape Cod, MA, Chesapeake Bay, MD, Everglades, FL, Mississippi Delta, LA, San Francisco Bay, CA, and Puget Sound, WA. Using the random forest machine learning algorithm, we tested whether imagery from multiple sensors, Sentinel-1 C-band synthetic aperture radar, Landsat, and the National Agriculture Imagery Program (NAIP), can improve model performance. The final model, driven by six Landsat vegetation indices and with the soil adjusted vegetation index as the most important (n = 409, RMSE = 310 g/m2, 10.3% normalized RMSE), successfully predicted biomass for a range of marsh plant functional types defined by height, leaf angle and growth form. Model results were improved by scaling field-measured biomass calibration data by NAIP-derived 30 m fraction green vegetation. With a mean plant carbon content of 44.1% (n = 1384, 95% C.I. = 43.99%-44.37%), we generated regional 30 m aboveground carbon density maps for estuarine and palustrine emergent tidal marshes as indicated by a modified NOAA Coastal Change Analysis Program map. We applied a multivariate delta method to calculate uncertainties in regional carbon densities and stocks that considered standard error in map area, mean biomass and mean %C. Louisiana palustrine emergent marshes had the highest C density (2.67 ± 0.004 Mg/ha) of all regions, while San Francisco Bay brackish/saline marshes had the highest C density of all

Lithobates sylvaticus (wood frog)

Science.gov (United States)

Fuller, Pam

2016-01-01

A single specimen found southwest of Hattiesburg in Timberton (31.270391oN, 89.327675oW; WGS 84). 23 July 2015. Gary, Kat, and Ron Lukens. Verifi ed by Kenneth Krysko, Florida Museum of Natural History (UF-Herpetology 176455). This species has never been recorded from the state of Mississippi before (Dodd 2013. Frogs of the United States and Canada – Volume 2. John Hopkins University Press, Baltimore, Maryland. 982 pp.). According to Dodd (2013), the closest population is located in east central Alabama, approximately 400 km to the northeast, as documented by Davis and Folkerts (1986. Brimleyana 12:29-50).

Below the Disappearing Marshes of an Urban Estuary: Historic Nitrogen Trends and Soil Structure

Science.gov (United States)

Marshes in the urban Jamaica Bay Estuary, New York, USA are disappearing at an average rate of 13 ha/yr, and multiple stressors (e.g., wastewater inputs, dredging activities, groundwater removal, and global warming) may be contributing to marsh losses. Among these stressors, wa...

Carbon sequestration by Australian tidal marshes

KAUST Repository

Macreadie, Peter I.; Ollivier, Q. R.; Kelleway, J. J.; Serrano, O.; Carnell, P. E.; Lewis, C. J. Ewers; Atwood, T. B.; Sanderman, J.; Baldock, J.; Connolly, R. M.; Duarte, Carlos M.; Lavery, P. S.; Steven, A.; Lovelock, C. E.

2017-01-01

) storage in Australia's tidal marshes (323 cores). OC stocks in the surface 1 m averaged 165.41 (SE 6.96) Mg OC ha-1 (range 14-963 Mg OC ha-1). The mean OC accumulation rate was 0.55 ± 0.02 Mg OC ha-1 yr-1. Geomorphology was the most important predictor

Salt Marsh--Estuarine Ecosystem: A Liquid Asset

Science.gov (United States)

Steever, E. Zell

1977-01-01

A comprehensive description of the salt marsh-estuarine ecosystem is provided. Topics discussed include: the general geologic history and formation of this ecosystem; physical and chemical parameters; variety; primary productivity; tidal zones; kind, sizes and abundance of vegetation; and the environmental factors influencing vegetation. (BT)

Geostatistical evaluation of integrated marsh management impact on mosquito vectors using before-after-control-impact (BACI design

Directory of Open Access Journals (Sweden)

Dempsey Mary E

2009-06-01

Full Text Available Abstract Background In many parts of the world, salt marshes play a key ecological role as the interface between the marine and the terrestrial environments. Salt marshes are also exceedingly important for public health as larval habitat for mosquitoes that are vectors of disease and significant biting pests. Although grid ditching and pesticides have been effective in salt marsh mosquito control, marsh degradation and other environmental considerations compel a different approach. Targeted habitat modification and biological control methods known as Open Marsh Water Management (OMWM had been proposed as a viable alternative to marsh-wide physical alterations and chemical control. However, traditional larval sampling techniques may not adequately assess the impacts of marsh management on mosquito larvae. To assess the effectiveness of integrated OMWM and marsh restoration techniques for mosquito control, we analyzed the results of a 5-year OMWM/marsh restoration project to determine changes in mosquito larval production using GIS and geostatistical methods. Methods The following parameters were evaluated using "Before-After-Control-Impact" (BACI design: frequency and geographic extent of larval production, intensity of larval production, changes in larval habitat, and number of larvicide applications. The analyses were performed using Moran's I, Getis-Ord, and Spatial Scan statistics on aggregated before and after data as well as data collected over time. This allowed comparison of control and treatment areas to identify changes attributable to the OMWM/marsh restoration modifications. Results The frequency of finding mosquito larvae in the treatment areas was reduced by 70% resulting in a loss of spatial larval clusters compared to those found in the control areas. This effect was observed directly following OMWM treatment and remained significant throughout the study period. The greatly reduced frequency of finding larvae in the treatment

Geostatistical evaluation of integrated marsh management impact on mosquito vectors using before-after-control-impact (BACI) design.

Science.gov (United States)

Rochlin, Ilia; Iwanejko, Tom; Dempsey, Mary E; Ninivaggi, Dominick V

2009-06-23

In many parts of the world, salt marshes play a key ecological role as the interface between the marine and the terrestrial environments. Salt marshes are also exceedingly important for public health as larval habitat for mosquitoes that are vectors of disease and significant biting pests. Although grid ditching and pesticides have been effective in salt marsh mosquito control, marsh degradation and other environmental considerations compel a different approach. Targeted habitat modification and biological control methods known as Open Marsh Water Management (OMWM) had been proposed as a viable alternative to marsh-wide physical alterations and chemical control. However, traditional larval sampling techniques may not adequately assess the impacts of marsh management on mosquito larvae. To assess the effectiveness of integrated OMWM and marsh restoration techniques for mosquito control, we analyzed the results of a 5-year OMWM/marsh restoration project to determine changes in mosquito larval production using GIS and geostatistical methods. The following parameters were evaluated using "Before-After-Control-Impact" (BACI) design: frequency and geographic extent of larval production, intensity of larval production, changes in larval habitat, and number of larvicide applications. The analyses were performed using Moran's I, Getis-Ord, and Spatial Scan statistics on aggregated before and after data as well as data collected over time. This allowed comparison of control and treatment areas to identify changes attributable to the OMWM/marsh restoration modifications. The frequency of finding mosquito larvae in the treatment areas was reduced by 70% resulting in a loss of spatial larval clusters compared to those found in the control areas. This effect was observed directly following OMWM treatment and remained significant throughout the study period. The greatly reduced frequency of finding larvae in the treatment areas led to a significant decrease (approximately 44%) in

Sears Point Tidal Marsh Restoration Project: Phase II

Science.gov (United States)

Information about the SFBWQP Sears Point Tidal Marsh Restoration Project: Phase II, part of an EPA competitive grant program to improve SF Bay water quality focused on restoring impaired waters and enhancing aquatic resources.

Avian communities in tidal salt marshes of San Francisco Bay: a review of functional groups by foraging guild and habitat association

Science.gov (United States)

Takekawa, John Y.; Woo, Isa; Gardiner, Rachel J.; Casazza, Michael L.; Ackerman, Joshua T.; Nur, Nadav; Liu, Leonard; Spautz, Hildie; Palaima, Arnas

2011-01-01

The San Francisco Bay estuary is highly urbanized, but it supports the largest remaining extent of tidal salt marshes on the west coast of North America as well as a diverse native bird community. San Francisco Bay tidal marshes are occupied by more than 113 bird species that represent 31 families, including five subspecies from three families that we denote as tidal-marsh obligates. To better identify the niche of bird species in tidal marshes, we present a review of functional groups based on foraging guilds and habitat associations. Foraging guilds describe the method by which species obtain food from tidal marshes, while habitat associations describe broad areas within the marsh that have similar environmental conditions. For example, the ubiquitous song sparrows (Alameda Melospiza melodia pusillula, Suisun M. m. maxillaris, and San Pablo M. m. samuelis) are surface-feeding generalists that consume prey from vegetation and the ground, and they are found across the entire marsh plain into the upland–marsh transition. In contrast, surface-feeding California black rails (Laterallus jamaicensis coturniculus) are cryptic, and generally restricted in their distribution to the mid- and high-marsh plain. Although in the same family, the endangered California clapper rail (Rallus longirostris obsoletus) has become highly specialized, foraging primarily on benthic fauna within marsh channels when they are exposed at low tide. Shorebirds such as the black-necked stilt (Himantopus mexicanus) typically probe in mud flats to consume macroinvertebrate prey, and are generally restricted to foraging on salt pans within the marsh plain, in ponds, or on mud flats during transitional stages of marsh evolution. The abundance and distribution of birds varies widely with changing water depths and vegetation colonization during different stages of restoration. Thus, tidal-marsh birds represent a rich and diverse community in bay marshes, with niches that may be distinguished by the

Behaviour of horses and cattle at two stocking densities in a coastal salt marsh

NARCIS (Netherlands)

Nolte, S.; Weyde, van der C.; Esselink, P.; Smit, C.; Wieren, van S.E.; Bakker, J.P.

2017-01-01

Livestock grazing has been practiced in salt marshes in the Wadden Sea area since 600 B.C. Currently livestock grazing is also applied for conservation management. However, effects of such grazing management on salt marshes are likely to vary depending on the species of livestock and stocking

Behaviour of horses and cattle at two stocking densities in a coastal salt marsh

NARCIS (Netherlands)

Nolte, S.; Van der Weyde, C; Esselink, Peter; Smit, C.; Van Wieren, S.E.; Bakker, Jan P.

Livestock grazing has been practiced in salt marshes in the Wadden Sea area since 600 B.C. Currently livestock grazing is also applied for conservation management. However, effects of such grazing management on salt marshes are likely to vary depending on the species of livestock and stocking

POTENTIAL FOR THE DEVELOPMENT OF MARSH VEGETATION FROM THE SEED BANK AFTER A DRAWDOWN

NARCIS (Netherlands)

TERHEERDT, GNJ; DROST, HJ

1994-01-01

In the inundated part of the Oostvaardersplassen, a marsh in The Netherlands, most of the emergent vegetation disappeared due to herbivory and erosion, resulting in a shallow lake. The emergent vegetation was successfully re-established by means of a drawdown. A comparable flooded marsh was studied

Sears Point Tidal Marsh Restoration Project: Phase I

Science.gov (United States)

Information about the SFBWQP Sears Point Tidal Marsh Restoration Project: Phase I project, part of an EPA competitive grant program to improve SF Bay water quality focused on restoring impaired waters and enhancing aquatic resources.

Enzymatic regulation of seasonal glycogen cycling in the freeze-tolerant wood frog, Rana sylvatica.

Science.gov (United States)

do Amaral, M Clara F; Lee, Richard E; Costanzo, Jon P

2016-12-01

Liver glycogen is an important energy store in vertebrates, and in the freeze-tolerant wood frog, Rana sylvatica, this carbohydrate also serves as a major source of the cryoprotectant glucose. We investigated how variation in the levels of the catalytic subunit of protein kinase A (PKAc), glycogen phosphorylase (GP), and glycogen synthase (GS) relates to seasonal glycogen cycling in a temperate (Ohioan) and subarctic (Alaskan) populations of this species. In spring, Ohioan frogs had reduced potential for glycogen synthesis, as evidenced by low GS activity and high PKAc protein levels. In addition, glycogen levels in spring were the lowest of four seasonal samples, as energy input was likely directed towards metabolism and somatic growth during this period. Near-maximal glycogen levels were reached by mid-summer, and remained unchanged in fall and winter, suggesting that glycogenesis was curtailed during this period. Ohioan frogs had a high potential for glycogenolysis and glycogenesis in winter, as evidenced by large glycogen reserves, high levels of GP and GS proteins, and high GS activity, which likely allows for rapid mobilization of cryoprotectant during freezing and replenishing of glycogen reserves during thawing. Alaskan frogs also achieved a near-maximal liver glycogen concentration by summer and displayed high glycogenic and glycogenolytic potential in winter, but, unlike Ohioan frogs, started replenishing their energy reserves early in spring. We conclude that variation in levels of both glycogenolytic and glycogenic enzymes likely happens in response to seasonal changes in energetic strategies and demands, with winter survival being a key component to understanding the regulation of glycogen cycling in this species.

Internal pigment cells respond to external UV radiation in frogs.

Science.gov (United States)

Franco-Belussi, Lilian; Nilsson Sköld, Helen; de Oliveira, Classius

2016-05-01

Fish and amphibians have pigment cells that generate colorful skins important for signaling, camouflage, thermoregulation and protection against ultraviolet radiation (UVR). However, many animals also have pigment cells inside their bodies, on their internal organs and membranes. In contrast to external pigmentation, internal pigmentation is remarkably little studied and its function is not well known. Here, we tested genotoxic effects of UVR and its effects on internal pigmentation in a neotropical frog, Physalaemus nattereri We found increases in body darkness and internal melanin pigmentation in testes and heart surfaces and in the mesenterium and lumbar region after just a few hours of UVR exposure. The melanin dispersion in melanomacrophages in the liver and melanocytes in testes increased after UV exposure. In addition, the amount of melanin inside melanomacrophages cells also increased. Although mast cells were quickly activated by UVR, only longer UVR exposure resulted in genotoxic effects inside frogs, by increasing the frequency of micronuclei in red blood cells. This is the first study to describe systemic responses of external UVR on internal melanin pigmentation, melanomacrophages and melanocytes in frogs and thus provides a functional explanation to the presence of internal pigmentation. © 2016. Published by The Company of Biologists Ltd.

Delineation of marsh types of the Texas coast from Corpus Christi Bay to the Sabine River in 2010

Science.gov (United States)

Enwright, Nicholas M.; Hartley, Stephen B.; Brasher, Michael G.; Visser, Jenneke M.; Mitchell, Michael K.; Ballard, Bart M.; Parr, Mark W.; Couvillion, Brady R.; Wilson, Barry C.

2014-01-01

Coastal zone managers and researchers often require detailed information regarding emergent marsh vegetation types for modeling habitat capacities and needs of marsh-reliant wildlife (such as waterfowl and alligator). Detailed information on the extent and distribution of marsh vegetation zones throughout the Texas coast has been historically unavailable. In response, the U.S. Geological Survey, in cooperation and collaboration with the U.S. Fish and Wildlife Service via the Gulf Coast Joint Venture, Texas A&M University-Kingsville, the University of Louisiana-Lafayette, and Ducks Unlimited, Inc., has produced a classification of marsh vegetation types along the middle and upper Texas coast from Corpus Christi Bay to the Sabine River. This study incorporates approximately 1,000 ground reference locations collected via helicopter surveys in coastal marsh areas and about 2,000 supplemental locations from fresh marsh, water, and “other” (that is, nonmarsh) areas. About two-thirds of these data were used for training, and about one-third were used for assessing accuracy. Decision-tree analyses using Rulequest See5 were used to classify emergent marsh vegetation types by using these data, multitemporal satellite-based multispectral imagery from 2009 to 2011, a bare-earth digital elevation model (DEM) based on airborne light detection and ranging (lidar), alternative contemporary land cover classifications, and other spatially explicit variables believed to be important for delineating the extent and distribution of marsh vegetation communities. Image objects were generated from segmentation of high-resolution airborne imagery acquired in 2010 and were used to refine the classification. The classification is dated 2010 because the year is both the midpoint of the multitemporal satellite-based imagery (2009–11) classified and the date of the high-resolution airborne imagery that was used to develop image objects. Overall accuracy corrected for bias (accuracy

Transport of mecoprop from agricultural soils to an adjacent salt marsh

International Nuclear Information System (INIS)

Fletcher, Caroline A.; Scrimshaw, Mark D.; Lester, John N.

2004-01-01

Salt marshes are important ecological areas and play a significant role in coastal flood defence schemes. In many areas of the UK they are adjacent to agricultural areas utilised for the growth of cereal crops, for which mecoprop is used as a selective herbicide in the control of broad-leafed weeds. This study measured concentrations of mecoprop in soils, drainage ditch waters and sediments and salt marsh sediments over a period of 138 days following spring application. Soil concentrations of up to 1827 μg/g were recorded after application, which demonstrated a half life for mecoprop of from 9 to 12 days, with first order kinetics. However, a major rainfall event 9 days after application resulted in significant transport of herbicide to the salt marsh via subsurface field drains, drainage ditches and discharge sluice. Mecoprop concentrations of up to 386 μg/l observed in water samples were above UK guidelines

Tidal Marshes across a Chesapeake Bay Subestuary Are Not Keeping up with Sea-Level Rise.

Science.gov (United States)

Beckett, Leah H; Baldwin, Andrew H; Kearney, Michael S

2016-01-01

Sea-level rise is a major factor in wetland loss worldwide, and in much of Chesapeake Bay (USA) the rate of sea-level rise is higher than the current global rate of 3.2 mm yr-1 due to regional subsidence. Marshes along estuarine salinity gradients differ in vegetation composition, productivity, decomposition pathways, and sediment dynamics, and may exhibit different responses to sea-level rise. Coastal marshes persist by building vertically at rates at or exceeding regional sea-level rise. In one of the first studies to examine elevation dynamics across an estuarine salinity gradient, we installed 15 surface elevation tables (SET) and accretion marker-horizon plots (MH) in tidal freshwater, oligohaline, and brackish marshes across a Chesapeake Bay subestuary. Over the course of four years, wetlands across the subestuary decreased 1.8 ± 2.7 mm yr-1 in elevation on average, at least 5 mm yr-1 below that needed to keep pace with global sea-level rise. Elevation change rates did not significantly differ among the marshes studied, and ranged from -9.8 ± 6.9 to 4.5 ± 4.3 mm yr-1. Surface accretion of deposited mineral and organic matter was uniformly high across the estuary (~9-15 mm yr-1), indicating that elevation loss was not due to lack of accretionary input. Position in the estuary and associated salinity regime were not related to elevation change or surface matter accretion. Previous studies have focused on surface elevation change in marshes of uniform salinity (e.g., salt marshes); however, our findings highlight the need for elevation studies in marshes of all salinity regimes and different geomorphic positions, and warn that brackish, oligohaline, and freshwater tidal wetlands may be at similarly high risk of submergence in some estuaries.

Assessment of metal and trace element contamination in water, sediment, plants, macroinvertebrates, and fish in Tavasci Marsh, Tuzigoot National Monument, Arizona

Science.gov (United States)

Beisner, Kimberly R.; Paretti, Nicholas V.; Brasher, Anne M.D.; Fuller, Christopher C.; Miller, Matthew P.

2014-01-01

Tavasci Marsh is a large freshwater marsh within the Tuzigoot National Monument in central Arizona. It is the largest freshwater marsh in Arizona that is unconnected to the Colorado River and is designated as an Important Bird Area by the Audubon Society. The marsh has been altered significantly by previous land use and the monument’s managers are evaluating the restoration of the marsh. In light of historical mining activities located near the marsh from the first half of the 20th century, evaluations of water, sediment, plant, and aquatic biota in the marsh were conducted. The evaluations were focused on nine metals and trace elements commonly associated with mining and other anthropogenic activities (As, Cd, Cr, Cu, Hg, Ni, Pb, Se, and Zn) together with isotopic analyses to understand the presence, sources and timing of water and sediment contaminants to the marsh and the occurrence in aquatic plants, dragonfly larvae, and fish. Results of water analyses indicate that there were two distinct sources of water contributing to the marsh during the study: one from older high elevation recharge entering the marsh at Shea Spring (as well as a number of unnamed seeps and springs on the northeastern edge of the marsh) and the other from younger low elevation recharge or from Pecks Lake. Water concentrations for arsenic exceeded the U.S. Environmental Protection Agency primary drinking water standard of 10 μg/L at all sampling sites. Surface waters at Tavasci Marsh may contain conditions favorable for methylmercury production. All surficial and core sediment samples exceeded or were within sample concentration variability of at least one threshold sediment quality guideline for As, Cd, Cr, Cu, Hg, Ni, Pb, and Zn. Several sediment sites were also above or were within sample concentration variability of severe or probable effect sediment quality guidelines for As, Cd, and Cu. Three sediment cores collected in the marsh have greater metal and trace element concentrations

Plant distribution and stand characteristics in brackish marshes: Unravelling the roles of abiotic factors and interspecific competition

Science.gov (United States)

Carus, Jana; Heuner, Maike; Paul, Maike; Schröder, Boris

2017-09-01

Due to increasing pressure on estuarine marshes from sea level rise and river training, there is a growing need to understand how species-environment relationships influence the zonation and growth of tidal marsh vegetation. In the present study, we investigated the distribution and stand characteristics of the two key brackish marsh species Bolboschoenus maritimus and Phragmites australis in the Elbe estuary together with several abiotic habitat factors. We then tested the effect of these habitat factors on plant growth and zonation with generalised linear models (GLMs). Our study provides detailed information on the importance of single habitat factors and their interactions for controlling the distribution patterns and stand characteristics of two key marsh species. Our results suggest that flow velocity is the main factor influencing species distribution and stand characteristics and together with soil-water salinity even affects the inundation tolerance of the two specie investigated here. Additionally, inundation height and duration as well as interspecific competition helped explain the distribution patterns and stand characteristics. By identifying the drivers of marsh zonation and stand characteristics and quantifying their effects, this study provides useful information for evaluating a future contribution of tidal marsh vegetation to ecosystem-based shore protection.

Cellular mechanisms of nociception in the frog

Czech Academy of Sciences Publication Activity Database

Kuffler, D. P.; Lyfenko, Alla; Vyklický st., Ladislav; Vlachová, Viktorie

2002-01-01

Roč. 88, č. 4 (2002), s. 1843-1850 ISSN 0022-3077 R&D Projects: GA ČR GA305/00/1639; GA MŠk LN00B122 Grant - others:NATO(XX) Grant 977062 Institutional research plan: CEZ:AV0Z5011922 Keywords : cellular mechanisms of nociception * frog Subject RIV: FH - Neurology Impact factor: 3.743, year: 2002

Where in the Marsh is the Water (and When)?: Measuring and modeling salt marsh hydrology for ecological and biogeochemical applications

Science.gov (United States)

Salt marsh hydrology presents many difficulties from a measurement and modeling standpoint: the bi-directional flows of tidal waters, variable water densities due to mixing of fresh and salt water, significant influences from vegetation, and complex stream morphologies. Because o...

Mangrove expansion into salt marshes alters associated faunal communities

Science.gov (United States)

Smee, Delbert L.; Sanchez, James A.; Diskin, Meredith; Trettin, Carl

2017-03-01

Climate change is altering the distribution of foundation species, with potential effects on organisms that inhabit these environments and changes to valuable ecosystem functions. In the Gulf of Mexico, black mangroves (Avicennia germinans) are expanding northward into salt marshes dominated by Spartina alterniflora (hereafter Spartina). Salt marshes are essential habitats for many organisms, including ecologically and economically important species such as blue crabs (Callinectes sapidus) and Penaeid shrimp (e.g., Penaeus aztecus), which may be affected by vegetation changes. Black mangroves occupied higher tidal elevations than Spartina, and Spartina was present only at its lowest tidal elevations in sites when mangroves were established. We compared nekton and infaunal communities within monoculture stands of Spartina that were bordered by mangroves to nearby areas where mangroves had not yet become established. Nekton and infaunal communities were significantly different in Spartina stands bordered by mangroves, even though salinity and temperature were not different. Overall abundance and biomass of nekton and infauna was significantly higher in marshes without mangroves, although crabs and fish were more abundant in mangrove areas. Black mangrove expansion as well as other ongoing vegetation shifts will continue in a warming climate. Understanding how these changes affect associated species is necessary for management, mitigation, and conservation.

Strong tidal modulation of net ecosystem exchange in a salt marsh in North Inlet, South Carolina

Science.gov (United States)

O'Halloran, T. L.; Smith, E. M.; Bogoev, I.

2017-12-01

Along the southeastern US, intertidal salt marshes represent a critical habitat at the interface of the terrestrial and marine environments and perform a variety of ecological functions and services that make them of great economic importance for coastal communities They provide essential fish and shellfish habitat, with a majority of all commercially- and recreationally important fish species being dependent on intertidal marsh habitat during some portion of their life cycle. The penaeid shrimp industry, South Carolina's most economically important fishery, would cease to exist without the critical nursery function provided by intertidal salt marshes. Smooth cordgrass (Spartina alterniflora) is a keystone species in the high salinity marshes of the southeastern U.S., and its functioning is essential to the health and survival of salt marshes under rising sea levels. To better quantify and facilitate prediction of future salt marsh productivity, in May of 2017, we established a new integrated eddy covariance tower system to measure the net ecosystem exchange of carbon in a salt marsh in coastal South Carolina. The tower site is co-located with long-term, ongoing measurements as part of the North Inlet-Winyah Bay National Estuarine Research Reserve (NI-WB NERR). Current sampling conducted within the eddy flux footprint includes: annual measures of the vegetation community at the time of peak biomass; bi-monthly measures of sediment elevation at Sediment Elevation Tables (SETs) located at the upper and lower ends of the flux footprint; monthly sediment porewater salinity and nutrient (ammonium, orthophosphate) and sulfide concentrations; and biannual sediment elevation surveys by RTK-GPS. A suite of water quality measurements are made every 15 minutes in the main creek that floods the marsh platform in the flux footprint. Here we present our first six months of observations investigating the abiotic drivers of productivity on daily (intratidal) to monthly timescales

Influence of Black Mangrove Expansion on Salt Marsh Food Web Dynamics in Coastal Louisiana

Science.gov (United States)

Powell, C.; Baustian, M. M.; Polito, M. J.

2017-12-01

The range of black mangroves (Avicennia germinans) is projected to expand in the northern Gulf of Mexico due to reduced winter freeze events and an increased rate of droughts. The colonization of mangroves in salt marshes alters habitat structure and creates a novel basal carbon source for consumers. This addition may modify trophic linkages and the structure of estuarine food webs. To understand the implications of mangrove expansion on food web dynamics of traditional Spartina alterniflora marshes, two sites in coastal Louisiana with three habitat types, marsh-dominated, mangrove-dominated, and a transition or mix of the two, were studied. Community composition of juvenile nekton was sampled using fyke nets, minnow traps, and suction sampling and analyzed for abundance and diversity. Primary carbon sources (emergent vegetation, phytoplankton, macroalgae, benthic microalgae, submerged aquatic vegetation, and soil organic matter) and consumers ((blue crabs (Callinectes sapidus), brown shrimp (Farfantepenaeus aztecus), grass shrimp (Palaemonetes spp.), Gulf killifish (Fundulus grandis), periwinkle snails (Littoraria irrorata), eastern oysters (Crassostrea virginica), and southern ribbed mussels (Geukensia granosissima)) collected at each habitat type were measured using stable isotope analysis (δ13C, δ15N, δ34S) to identify trophic level, basal carbon sources, and assess how mangrove carbon is incorporated into salt marsh food webs. While data analysis is ongoing, preliminary results indicate that basal carbon sources supporting some marsh consumers (e.g., periwinkle snails) shift between habitat types, while others remain static (e.g., grass shrimp). This research will further develop our understanding of how climate induced shifts in vegetation influences valued marsh-dependent consumers in the estuarine ecosystems of northern Gulf of Mexico.

Evaluating tidal marsh sustainability in the face of sea-level rise: a hybrid modeling approach applied to San Francisco Bay.

Directory of Open Access Journals (Sweden)

Diana Stralberg

Full Text Available Tidal marshes will be threatened by increasing rates of sea-level rise (SLR over the next century. Managers seek guidance on whether existing and restored marshes will be resilient under a range of potential future conditions, and on prioritizing marsh restoration and conservation activities.Building upon established models, we developed a hybrid approach that involves a mechanistic treatment of marsh accretion dynamics and incorporates spatial variation at a scale relevant for conservation and restoration decision-making. We applied this model to San Francisco Bay, using best-available elevation data and estimates of sediment supply and organic matter accumulation developed for 15 Bay subregions. Accretion models were run over 100 years for 70 combinations of starting elevation, mineral sediment, organic matter, and SLR assumptions. Results were applied spatially to evaluate eight Bay-wide climate change scenarios.Model results indicated that under a high rate of SLR (1.65 m/century, short-term restoration of diked subtidal baylands to mid marsh elevations (-0.2 m MHHW could be achieved over the next century with sediment concentrations greater than 200 mg/L. However, suspended sediment concentrations greater than 300 mg/L would be required for 100-year mid marsh sustainability (i.e., no elevation loss. Organic matter accumulation had minimal impacts on this threshold. Bay-wide projections of marsh habitat area varied substantially, depending primarily on SLR and sediment assumptions. Across all scenarios, however, the model projected a shift in the mix of intertidal habitats, with a loss of high marsh and gains in low marsh and mudflats.Results suggest a bleak prognosis for long-term natural tidal marsh sustainability under a high-SLR scenario. To minimize marsh loss, we recommend conserving adjacent uplands for marsh migration, redistributing dredged sediment to raise elevations, and concentrating restoration efforts in sediment-rich areas

How do how internal and external processes affect the behaviors of coupled marsh mudflat systems; infill, stabilize, retreat, or drown?

Science.gov (United States)

Carr, J. A.; Mariotti, G.; Wiberg, P.; Fagherazzi, S.; McGlathery, K.

2013-12-01

Intertidal coastal environments are prone to changes induced by sea level rise, increases in storminess, and anthropogenic disturbances. It is unclear how changes in external drivers may affect the dynamics of low energy coastal environments because their response is non-linear, and characterized by many thresholds and discontinuities. As such, process-based modeling of the ecogeomorphic processes underlying the dynamics of these ecosystems is useful, not only to predict their change through time, but also to generate new hypotheses and research questions. Here, a three-point dynamic model was developed to investigate how internal and external processes affect the behavior of coupled marsh mudflat systems. The model directly incorporates ecogeomorphological feedbacks between wind waves, salt marsh vegetation, allochthonous sediment loading, tidal flat vegetation and sea level rise. The model was applied to examine potential trajectories of salt marshes on the Eastern seaboard of the United States, including those in the Plum Island Ecosystems (PIE), Virginia Coast Reserve (VCR) and Georgia Coastal Ecosystems (GCE) long term ecological research (LTER) sites. While these sites are undergoing similar rates of relative sea level rise (RSLR), they have distinct differences in site specific environmental drivers including tides, wind waves, allochthonous sediment supply and the presence or absence of seagrass. These differences lead to the emergence of altered behaviors in the coupled salt marsh-tidal flat system. For marsh systems without seagrass or significant riverine sediment supply, conditions similar to those at PIE, results indicated that horizontal and vertical marsh evolution respond in opposing ways to wave induced processes. Marsh horizontal retreat is triggered by large mudflats and strong winds, whereas small mudflats and weak winds reduce the sediment supply to the salt marsh, decreasing its capability to keep pace with sea level rise. Marsh expansion and

Vegetation - Suisun Marsh, Change 1999 to 2000 [ds163

Data.gov (United States)

California Natural Resource Agency — This vegetation mapping project of Suisun Marsh blends ground-based classification, aerial photo interpretation, and GIS editing and processing. The method is based...

Vegetation - Suisun Marsh, Change 1999 to 2003 [ds164

Data.gov (United States)

California Natural Resource Agency — This vegetation mapping project of Suisun Marsh blends ground-based classification, aerial photo interpretation, and GIS editing and processing. The method is based...

Marsh soil responses to tidal water nitrogen additions contribute to creek bank fracturing and slumping

Science.gov (United States)

Large-scale dissolved nutrient enrichment can cause a reduction in belowground biomass, increased water content of soils, and increased microbial decomposition, which has been linked with slumping of low marsh Spartina vegetation into creeks, and ultimately marsh loss. Our study ...

A remote sensing-based model of tidal marsh aboveground carbon stocks for the conterminous United States

Science.gov (United States)

Byrd, Kristin B.; Ballanti, Laurel; Thomas, Nathan; Nguyen, Dung; Holmquist, James R.; Simard, Marc; Windham-Myers, Lisamarie

2018-01-01

Remote sensing based maps of tidal marshes, both of their extents and carbon stocks, have the potential to play a key role in conducting greenhouse gas inventories and implementing climate mitigation policies. Our objective was to generate a single remote sensing model of tidal marsh aboveground biomass and carbon that represents nationally diverse tidal marshes within the conterminous United States (CONUS). We developed the first calibration-grade, national-scale dataset of aboveground tidal marsh biomass, species composition, and aboveground plant carbon content (%C) from six CONUS regions: Cape Cod, MA, Chesapeake Bay, MD, Everglades, FL, Mississippi Delta, LA, San Francisco Bay, CA, and Puget Sound, WA. Using the random forest machine learning algorithm, we tested whether imagery from multiple sensors, Sentinel-1 C-band synthetic aperture radar, Landsat, and the National Agriculture Imagery Program (NAIP), can improve model performance. The final model, driven by six Landsat vegetation indices and with the soil adjusted vegetation index as the most important (n = 409, RMSE = 310 g/m2, 10.3% normalized RMSE), successfully predicted biomass for a range of marsh plant functional types defined by height, leaf angle and growth form. Model results were improved by scaling field-measured biomass calibration data by NAIP-derived 30 m fraction green vegetation. With a mean plant carbon content of 44.1% (n = 1384, 95% C.I. = 43.99%–44.37%), we generated regional 30 m aboveground carbon density maps for estuarine and palustrine emergent tidal marshes as indicated by a modified NOAA Coastal Change Analysis Program map. We applied a multivariate delta method to calculate uncertainties in regional carbon densities and stocks that considered standard error in map area, mean biomass and mean %C. Louisiana palustrine emergent marshes had the highest C density (2.67 ± 0.004 Mg/ha) of all regions, while San Francisco Bay brackish/saline marshes had

Trichobothrial mediation of an aquatic escape response: Directional jumps by the fishing spider, Dolomedes triton, foil frog attacks

Directory of Open Access Journals (Sweden)

Robert B. Suter

2003-07-01

Full Text Available Fishing spiders (Pisauridae frequent the surfaces of ponds and streams and thereby expose themselves to predation by a variety of aquatic and semi-aquatic vertebrates. To assess the possibility that the impressive jumps of fishing spiders from the water surface function in evading attacks by frogs, attacks by bullfrogs (Rana catesbiana and green frogs (R. clamitans on Dolomedes triton were studied. Both the attack dynamics of the frogs and the evasive behaviors of the spiders were recorded at 250 frames per second. A freeze-dried bullfrog, propelled toward spiders with acceleration, posture, and position that approximated the natural attack posture and dynamics, was used to assess the spiders' behavior. Qualitatively, the spiders responded to these mock-attacks just as they had to attacks by live frogs: jumping (N=29 jumps, 56.9% of instances, rearing the legs nearest the attacking frog (N=15, 29.4%, or showing no visible response (N=7, 13.7%. Spiders that jumped always did so away (in the vertical plane from the attack (mean =137° vs. vertical at 90° or horizontally toward the frog at 0°. The involvement of the trichobothria (leg hairs sensitive to air movements, and the eyes as sensory mediators of the evasion response was assessed. Spiders with deactivated trichobothria were significantly impaired relative to intact and sham-deactivated spiders, and relative to spiders in total darkness. Thus, functional trichobothria, unlike the eyes, are both necessary and sufficient mediators of the evasion response. Measurements of air flow during frog attacks suggest that an exponential rise in flow velocity is the airborne signature of an attack.

Landscape genetics of high mountain frog metapopulations

Science.gov (United States)

Murphy, M.A.; Dezzani, R.; Pilliod, D.S.; Storfer, A.

2010-01-01

Explaining functional connectivity among occupied habitats is crucial for understanding metapopulation dynamics and species ecology. Landscape genetics has primarily focused on elucidating how ecological features between observations influence gene flow. Functional connectivity, however, may be the result of both these between-site (landscape resistance) landscape characteristics and at-site (patch quality) landscape processes that can be captured using network based models. We test hypotheses of functional connectivity that include both between-site and at-site landscape processes in metapopulations of Columbia spotted frogs (Rana luteiventris) by employing a novel justification of gravity models for landscape genetics (eight microsatellite loci, 37 sites, n = 441). Primarily used in transportation and economic geography, gravity models are a unique approach as flow (e.g. gene flow) is explained as a function of three basic components: distance between sites, production/attraction (e.g. at-site landscape process) and resistance (e.g. between-site landscape process). The study system contains a network of nutrient poor high mountain lakes where we hypothesized a short growing season and complex topography between sites limit R. luteiventris gene flow. In addition, we hypothesized production of offspring is limited by breeding site characteristics such as the introduction of predatory fish and inherent site productivity. We found that R. luteiventris connectivity was negatively correlated with distance between sites, presence of predatory fish (at-site) and topographic complexity (between-site). Conversely, site productivity (as measured by heat load index, at-site) and growing season (as measured by frost-free period between-sites) were positively correlated with gene flow. The negative effect of predation and positive effect of site productivity, in concert with bottleneck tests, support the presence of source-sink dynamics. In conclusion, gravity models provide a

Inventory of the pool frog, newt and gulyxne in Forsmark 2012

International Nuclear Information System (INIS)

Collinder, Per

2013-01-01

On assignment from the Swedish Nuclear Fuel and Waste Management Co (SKB), Ekologigruppen AB carried out inventories of species populations during the summer of 2012. Species included in the study are described in three separate chapters of this report. The three species were pool frog Rana lessonae, great crested newt Triturus cristatus, and fen orchid Liparis loeselii. SKB will follow up the development of the local populations. Inventory of pool frogs are already a follow-up on a study carried out in 2011. Concern for these species is due to their protection within the EU system of species and habitat protection. Construction of the planned depository for used nuclear fuel will involve redirection of groundwater, which could potentially drain these wetlands. The three species pool frog, great crested newt and fen orchid are inventoried by well-documented procedures, which will allow repletion of the study at the same locals and according to the same methods during consequent years. The inventories are not complete in the sense that they would give number of individuals in a local population. Rather, the result should be regarded as an index for comparison and monitoring

Response of gaseous carbon emissions to low-level salinity increase in tidal marsh ecosystem of the Min River estuary, southeastern China.

Science.gov (United States)

Hu, Minjie; Ren, Hongchang; Ren, Peng; Li, Jiabing; Wilson, Benjamin J; Tong, Chuan

2017-02-01

Although estuarine tidal marshes are important contributors to the emission of greenhouse gases into the atmosphere, the relationship between carbon dioxide (CO 2 ), methane (CH 4 ) emission, and environmental factors, with respect to estuarine marshes, has not been clarified thoroughly. This study investigated the crucial factors controlling the emission of CO 2 and CH 4 from a freshwater marsh and a brackish marsh located in a subtropical estuary in southeastern China, as well as their magnitude. The duration of the study period was November 2013 to October 2014. Relevant to both the field and incubation experiments, the CO 2 and CH 4 emissions from the two marshes showed pronounced seasonal variations. The CO 2 and CH 4 emissions from both marshes demonstrated significant positive correlations with the air/soil temperature (pemissions between the freshwater and brackish marshes in the subtropical estuary, whereas there was a difference in the CH 4 emissions between the two sites (pemissions from the estuarine freshwater marshes, these factors had little effect on the CO 2 emissions with respect to an increase in salinity of less than 5‰. The findings of this study could have important implications for estimating the global warming contributions of estuarine marshes along differing salinity gradients. Copyright © 2016. Published by Elsevier B.V.

Effects of CFT Legumine (5% Rotenone) on tadpole survival and metamorphosis of Chiricahua leopard frogs Lithobates chiricahuensis, Northern leopard frogs L. pipiens, and American bullfrogs L. catesbeianus

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Alvarez, Guillermo; Caldwell, Colleen A.; Kruse, Carter G.

2017-01-01

Amphibians may experience collateral effects if exposed to CFT Legumine (5% rotenone), a piscicide that is used to remove invasive fish. A series of 48-h static toxicity tests assessed the acute effects of CFT Legumine on multi-aged tadpoles of the federally listed Chiricahua leopard frog Lithobates chiricahuensis, the widespread northern leopard frog L. pipiens, and the increasingly invasive American bullfrog L. catesbeianus. At the earliest Gosner stages (GS 21–25), Chiricahua leopard frogs were more sensitive to CFT Legumine (median lethal concentration [LC50] = 0.41–0.58 mg/L) than American bullfrogs (LC50 = 0.63–0.69 mg/L) and northern leopard frogs (LC50 = 0.91 and 1.17 mg/L). As tadpoles developed (i.e., increase in GS), their sensitivity to rotenone decreased. In a separate series of 48-h static nonrenewal toxicity tests, tadpoles (GS 21–25 and GS 31–36) of all three species were exposed to piscicidal concentrations of CFT Legumine (0.5, 1.0, and 2.0 mg/L) to assess postexposure effects on metamorphosis. In survivors of all three species at both life stages, the time to tail resorption was nearly doubled in comparison with that of controls. For example, mid-age (GS 31–36) Chiricahua leopard frog tadpoles required 210.7 h to complete tail resorption, whereas controls required 108.5 h. However, because tail resorption is a relatively short period in metamorphosis, the total duration of development (days from posthatch to complete metamorphosis) and the final weight did not differ in either age-group surviving nominal concentrations of 0.5-, 1.0-, and 2.0-mg/L CFT Legumine relative to controls. This research demonstrates that the CFT Legumine concentrations commonly used in field applications to remove unwanted fish could result in considerable mortality of the earliest stages of Lithobates species. In addition to acute lethality, piscicide treatments may result in delayed tail resorption, which places the tadpoles at risk by increasing

The rediscovered Hula painted frog is a living fossil.

Science.gov (United States)

Biton, Rebecca; Geffen, Eli; Vences, Miguel; Cohen, Orly; Bailon, Salvador; Rabinovich, Rivka; Malka, Yoram; Oron, Talya; Boistel, Renaud; Brumfeld, Vlad; Gafny, Sarig

2013-01-01

Amphibian declines are seen as an indicator of the onset of a sixth mass extinction of life on earth. Because of a combination of factors such as habitat destruction, emerging pathogens and pollutants, over 156 amphibian species have not been seen for several decades, and 34 of these were listed as extinct by 2004. Here we report the rediscovery of the Hula painted frog, the first amphibian to have been declared extinct. We provide evidence that not only has this species survived undetected in its type locality for almost 60 years but also that it is a surviving member of an otherwise extinct genus of alytid frogs, Latonia, known only as fossils from Oligocene to Pleistocene in Europe. The survival of this living fossil is a striking example of resilience to severe habitat degradation during the past century by an amphibian.

Correlation between chloride flux via the mitochondria-rich cells and transepithelial water movement in isolated frog skin (Rana esculenta)

DEFF Research Database (Denmark)

Nielsen, Robert

1995-01-01

Antidiuretic hormone; chloride transport; electroosmosis; Frog skin; Intercalated cells; Local osmosis; Mitochondria-rich cells.......Antidiuretic hormone; chloride transport; electroosmosis; Frog skin; Intercalated cells; Local osmosis; Mitochondria-rich cells....

Composition of Fish Communities in a European Macrotidal Salt Marsh (the Mont Saint-Michel Bay, France)

Science.gov (United States)

Laffaille, P.; Feunteun, E.; Lefeuvre, J.-C.

2000-10-01

At least 100 fish species are known to be present in the intertidal areas (estuaries, mudflats and salt marshes) of Mont Saint-Michel Bay. These and other comparable shallow marine coastal waters, such as estuaries and lagoons, play a nursery role for many fish species. However, in Europe little attention has been paid to the value of tidal salt marshes for fishes. Between March 1996 and April 1999, 120 tides were sampled in a tidal creek. A total of 31 species were caught. This community was largely dominated by mullets ( Liza ramada represent 87% of the total biomass) and sand gobies ( Pomatoschistus minutus and P. lozanoi represent 82% of the total numbers). These species and also Gasterosteus aculeatus , Syngnathus rostellatus, Dicentrarchus labrax, Mugil spp., Liza aurata and Sprattus sprattus were the most frequent species (>50% of monthly frequency of occurrence). In Europe, salt marshes and their creeks are flooded only during high spring tides. So, fishes only invade this environment during short immersion periods, and no species can be considered as marsh resident. But, the salt marsh was colonized by fish every time the tide reached the creek, and during the short time of flood, dominant fishes fed actively and exploited the high productivity. Nevertheless, this study shows that there is little interannual variation in the fish community and there are three ' seasons ' in the fish fauna of the marsh. Marine straggler and marine estuarine dependent species colonize marshes between spring (recruitment period in the bay) and autumn before returning into deeper adjacent waters. Estuarine fishes are present all year round with maximum abundances in the end of summer. The presence of fishes confirms that this kind of wetland plays an important trophic and nursery role for these species. Differences in densities and stages distribution of these species into Mont Saint-Michel systems (tidal mudflats, estuaries and tidal salt marshes) can reduce the trophic

Old World frog and bird vocalizations contain prominent ultrasonic harmonics

Science.gov (United States)

Narins, Peter M.; Feng, Albert S.; Lin, Wenyu; Schnitzler, Hans-Ulrich; Denzinger, Annette; Suthers, Roderick A.; Xu, Chunhe

2004-02-01

Several groups of mammals such as bats, dolphins and whales are known to produce ultrasonic signals which are used for navigation and hunting by means of echolocation, as well as for communication. In contrast, frogs and birds produce sounds during night- and day-time hours that are audible to humans; their sounds are so pervasive that together with those of insects, they are considered the primary sounds of nature. Here we show that an Old World frog (Amolops tormotus) and an oscine songbird (Abroscopus albogularis) living near noisy streams reliably produce acoustic signals that contain prominent ultrasonic harmonics. Our findings provide the first evidence that anurans and passerines are capable of generating tonal ultrasonic call components and should stimulate the quest for additional ultrasonic species.

Bier spots

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Ahu Yorulmaz,

2015-10-01

Full Text Available Also called as physiologic anemic macules, Bier spots are small, hypopigmented irregularly shaped macules against a background of diffuse erythema, which creates an appearance of speckled vascular mottling of the skin. Bier spots most commonly appear on distal portions of the limbs though there are case reports describing diffuse involvement, which also affect trunk and mucous membranes of the patient. Although the exact pathophysiological mechanisms underlying Bier spots still need to be elucidated, Bier spots have been suggested to be a vascular anomaly caused by vasoconstriction of small vessels. In addition, several diseases have been proposed to be associated with Bier spots, including scleroderma renal crisis, cryoglobulinemia, Peutz-Jeghers syndrome, alopecia areata and hypoplasia of the aorta, although it has not been shown whether these associations are casual or coincidental. The clinical presentation of Bier spots is quite typical. These tiny whitish macules easily become prominent when the affected limb is placed in a dependent position and fade away when the limb is raised. Here we report a case of Bier spots in a 32-year-old male patient with characteristical clinical manifestations.

Citizen Science Program Shows Urban Areas Have Lower Occurrence of Frog Species, but Not Accelerated Declines.

Directory of Open Access Journals (Sweden)

Martin J Westgate

Full Text Available Understanding the influence of landscape change on animal populations is critical to inform biodiversity conservation efforts. A particularly important goal is to understand how urban density affects the persistence of animal populations through time, and how these impacts can be mediated by habitat provision; but data on this question are limited for some taxa. Here, we use data from a citizen science monitoring program to investigate the effect of urbanization on patterns of frog species richness and occurrence over 13 years. Sites surrounded by a high proportion of bare ground (a proxy for urbanization had consistently lower frog occurrence, but we found no evidence that declines were restricted to urban areas. Instead, several frog species showed declines in rural wetlands with low-quality habitat. Our analysis shows that urban wetlands had low but stable species richness; but also that population trajectories are strongly influenced by vegetation provision in both the riparian zone and the wider landscape. Future increases in the extent of urban environments in our study area are likely to negatively impact populations of several frog species. However, existing urban areas are unlikely to lose further frog species in the medium term. We recommend that landscape planning and management focus on the conservation and restoration of rural wetlands to arrest current declines, and the revegetation of urban wetlands to facilitate the re-expansion of urban-sensitive species.

Effects of disturbance associated with seismic exploration for oil and gas reserves in coastal marshes

Science.gov (United States)

Howard, Rebecca J.; Wells, Christopher J.; Michot, Thomas C.; Johnson, Darren J.

2014-01-01

Anthropogenic disturbances in wetland ecosystems can alter the composition and structure of plant assemblages and affect system functions. Extensive oil and gas extraction has occurred in wetland habitats along the northern Gulf of Mexico coast since the early 1900s. Activities involved with three-dimensional (3D) seismic exploration for these resources cause various disturbances to vegetation and soils. We documented the impact of a 3D seismic survey in coastal marshes in Louisiana, USA, along transects established before exploration began. Two semi-impounded marshes dominated by Spartina patens were in the area surveyed. Vegetation, soil, and water physicochemical data were collected before the survey, about 6 weeks following its completion, and every 3 months thereafter for 2 years. Soil cores for seed bank emergence experiments were also collected. Maximum vegetation height at impact sites was reduced in both marshes 6 weeks following the survey. In one marsh, total vegetation cover was also reduced, and dead vegetation cover increased, at impact sites 6 weeks after the survey. These effects, however, did not persist 3 months later. No effects on soil or water properties were identified. The total number of seeds that germinated during greenhouse studies increased at impact sites 5 months following the survey in both marshes. Although some seed bank effects persisted 1 year, these effects were not reflected in standing vegetation. The marshes studied were therefore resilient to the impacts resulting from 3D seismic exploration because vegetation responses were short term in that they could not be identified a few months following survey completion.

Effects of Disturbance Associated With Seismic Exploration for Oil and Gas Reserves in Coastal Marshes

Science.gov (United States)

Howard, Rebecca J.; Wells, Christopher J.; Michot, Thomas C.; Johnson, Darren J.

2014-07-01

Anthropogenic disturbances in wetland ecosystems can alter the composition and structure of plant assemblages and affect system functions. Extensive oil and gas extraction has occurred in wetland habitats along the northern Gulf of Mexico coast since the early 1900s. Activities involved with three-dimensional (3D) seismic exploration for these resources cause various disturbances to vegetation and soils. We documented the impact of a 3D seismic survey in coastal marshes in Louisiana, USA, along transects established before exploration began. Two semi-impounded marshes dominated by Spartina patens were in the area surveyed. Vegetation, soil, and water physicochemical data were collected before the survey, about 6 weeks following its completion, and every 3 months thereafter for 2 years. Soil cores for seed bank emergence experiments were also collected. Maximum vegetation height at impact sites was reduced in both marshes 6 weeks following the survey. In one marsh, total vegetation cover was also reduced, and dead vegetation cover increased, at impact sites 6 weeks after the survey. These effects, however, did not persist 3 months later. No effects on soil or water properties were identified. The total number of seeds that germinated during greenhouse studies increased at impact sites 5 months following the survey in both marshes. Although some seed bank effects persisted 1 year, these effects were not reflected in standing vegetation. The marshes studied were therefore resilient to the impacts resulting from 3D seismic exploration because vegetation responses were short term in that they could not be identified a few months following survey completion.

More similar than you think: Frog metamorphosis as a model of human perinatal endocrinology.

Science.gov (United States)

Buchholz, Daniel R

2015-12-15

Hormonal control of development during the human perinatal period is critically important and complex with multiple hormones regulating fetal growth, brain development, and organ maturation in preparation for birth. Genetic and environmental perturbations of such hormonal control may cause irreversible morphological and physiological impairments and may also predispose individuals to diseases of adulthood, including diabetes and cardiovascular disease. Endocrine and molecular mechanisms that regulate perinatal development and that underlie the connections between early life events and adult diseases are not well elucidated. Such mechanisms are difficult to study in uterus-enclosed mammalian embryos because of confounding maternal effects. To elucidate mechanisms of developmental endocrinology in the perinatal period, Xenopus laevis the African clawed frog is a valuable vertebrate model. Frogs and humans have identical hormones which peak at birth and metamorphosis, have conserved hormone receptors and mechanisms of gene regulation, and have comparable roles for hormones in many target organs. Study of molecular and endocrine mechanisms of hormone-dependent development in frogs is advantageous because an extended free-living larval period followed by metamorphosis (1) is independent of maternal endocrine influence, (2) exhibits dramatic yet conserved developmental effects induced by thyroid and glucocorticoid hormones, and (3) begins at a developmental stage with naturally undetectable hormone levels, thereby facilitating endocrine manipulation and interpretation of results. This review highlights the utility of frog metamorphosis to elucidate molecular and endocrine actions, hormone interactions, and endocrine disruption, especially with respect to thyroid hormone. Knowledge from the frog model is expected to provide fundamental insights to aid medical understanding of endocrine disease, stress, and endocrine disruption affecting the perinatal period in humans

Comparison of vesicular-arbuscular mycorrhizae in plants from disturbed and adjacent undisturbed regions of a coastal salt marsh in Clinton, Connecticut, USA

Science.gov (United States)

Cooke, John C.; Lefor, Michael W.

1990-01-01

Roots of salt marsh plant species Spartina alterniflora, S. patens, Distichlis spicata, and others were examined for the presence of vesicular-arbuscular mycorrhizal (VAM) fungi. Samples were taken from introduced planted material in a salt marsh restoration project and from native material in adjacent marsh areas along the Indian River, Clinton, Connecticut, USA. After ten years the replanted area still has sites devoid of vegetation. The salt marsh plants introduced there were devoid of VAM fungi, while high marsh species from the adjacent undisturbed region showed consistent infection, leading the authors to suggest that VAM fungal infection of planting stocks may be a factor in the success of marsh restoration.

Effects of coastal marsh conversion to shrimp aquaculture ponds on CH4 and N2O emissions

Science.gov (United States)

Yang, P.; Bastviken, D.; Lai, D. Y. F.; Jin, B. S.; Mou, X. J.; Tong, C.; Yao, Y. C.

2017-12-01

In this study, we compared the CH4 and N2O fluxes from a tidal brackish Cyperus malaccensis marsh ecosystem and nearby shrimp ponds, converted from C. malaccensis marsh in the last 3-4 years, in the Min River estuary of southeast China over the aquaculture period of the year. Significant differences in CH4 and N2O fluxes were observed in space (between brackish marsh and shrimp ponds) and in time (between sampling occasions that were distributed over the aquaculture period). CH4 fluxes from the shrimp ponds were on an average 10-fold higher than from the brackish marsh. N2O emissions, on the other hand, were lower from the shrimp pond (25% of the emissions from the brackish marsh). Accessory data indicates that these patterns were primarily linked to water level variability and temperature (all fluxes), sediment porewater sulfate concentrations (CH4 flux) and total nitrogen concentrations (N2O flux). Our research demonstrates that the coastal marsh ecosystem converted to aquaculture ponds considerably alter emissions of CH4 and N2O and provides input to the global discussion on how to account for emissions from various types of flooded land in greenhouse gas inventories.

Natural and Anthropogenic Causes of Accelerated Sediment Accumulation Rates in Nehalem Bay Salt Marshes, Oregon

Science.gov (United States)

Molino, G. D.; Wheatcroft, R. A.; Peck, E. K.; Brophy, L.

2016-12-01

Vertical sediment accretion in estuarine salt marshes occurs as sediments settle out of the water column and onto marsh soils during periods of tidal inundation - thus accretion is influenced by both relative sea level rise (RSLR) and sediment flux to the estuary. Oregon estuaries are understudied compared to their East and Gulf Coast counterparts, but provide a unique opportunity to disentangle these effects. A broader study in three Oregon estuaries (Peck et al., this session) indicates RSLR as the dominant factor controlling sedimentation rates. Working in Nehalem Bay (northern Oregon coast), replicate sediment cores were taken along several transects across an elevation gradient for analysis of sediment and carbon accumulation using CT scans, gamma detection of Pb-210, X-Ray Fluorescence (XRF) and Loss-on-Ignition (LOI). Preliminary results indicate sediment accumulation rates over the past century are higher than rates seen in other comparable Oregon salt marshes; this is consistent with past studies and preliminary analysis of remote sensing data that show significant horizontal expansion of Nehalem marshes. A number of possible causes for the high sediment accumulation rates - hydroclimate of Nehalem River, extensive timber harvesting, forest fires such as the so-called Tillamook Burns, and diking of adjacent marshes - are being explored.

Oxidative stress induced in PCB 126-exposed northern leopard frogs, Rana pipiens

Science.gov (United States)

Huang, Y.-W.; Hoffman, D.J.; Karasov, W.H.

2007-01-01

Northern leopard frogs Rana pipiens exposed to PCB 126 (3,3',4,4',5-pentachlorobiphenyl) were examined for hepatic oxidative stress. In a dose-response study, northern leopard frogs were injected intraperitoneally with either PCB 126 in corn oil (0.2, 0.7, 2.3, or 7.8 mg/kg body weight) or corn oil alone. In a time-course study, frogs received 7.8 mg/kg or corn oil alone, and were examined at 1, 2, 3, and 4 wk after dosing. Hepatic concentrations of reduced glutathione (GSH), thiobarbituric acid-reactive substances (TBARS), and total sulfhydryls (total SH), as well as activities of glutathione peroxidase (GSH-P), GSSG reductase (GSSG-R), glucose-6-phosphate dehydrogenase (G-6-PDH), and glutathione S-transferase (GSH-S-T) were measured. In the dose-response experiment, few effects were apparent 1 wk after dosing. In the time-course experiment, significant changes were observed in the 7.8-mg/kg group at 2 wk or more posttreatment. Hepatic concentrations of GSH and TBARS were higher than in corresponding controls at wk 3 and 4; the activities of GSSG-R and GSH-S-T were higher than in controls at wk 2 and 4; and the activity of G-6-PDH was increased at wk 2 and 4. These data collectively indicate that altered glutathione metabolism and oxidative stress occurred and were indicative of both toxicity and induction of protective mechanisms in frogs exposed to PCB. A similar delay in response was reported in fish and may relate to lower metabolic rate and physiological reactions in ectothermic vertebrates

Oxidative stress induced in PCB 126-exposed northern leopard frogs, Rana pipiens.

Science.gov (United States)

Huang, Yue-wern; Hoffman, David J; Karasov, William H

2007-04-15

Northern leopard frogs Rana pipiens exposed to PCB 126 (3,3',4,4',5-pentachlorobiphenyl) were examined for hepatic oxidative stress. In a dose-response study, northern leopard frogs were injected intraperitoneally with either PCB 126 in corn oil (0.2, 0.7, 2.3, or 7.8 mg/kg body weight) or corn oil alone. In a time-course study, frogs received 7.8 mg/kg or corn oil alone, and were examined at 1, 2, 3, and 4 wk after dosing. Hepatic concentrations of reduced glutathione (GSH), thiobarbituric acid-reactive substances (TBARS), and total sulfhydryls (total SH), as well as activities of glutathione peroxidase (GSH-P), GSSG reductase (GSSG-R), glucose-6-phosphate dehydrogenase (G-6-PDH), and glutathione S-transferase (GSH-S-T) were measured. In the dose-response experiment, few effects were apparent 1 wk after dosing. In the time-course experiment, significant changes were observed in the 7.8-mg/kg group at 2 wk or more posttreatment. Hepatic concentrations of GSH and TBARS were higher than in corresponding controls at wk 3 and 4; the activities of GSSG-R and GSH-S-T were higher than in controls at wk 2 and 4; and the activity of G-6-PDH was increased at wk 2 and 4. These data collectively indicate that altered glutathione metabolism and oxidative stress occurred and were indicative of both toxicity and induction of protective mechanisms in frogs exposed to PCB. A similar delay in response was reported in fish and may relate to lower metabolic rate and physiological reactions in ectothermic vertebrates.

Evolutionary and natural history of the turtle frog, Myobatrachus gouldii, a bizarre myobatrachid frog in the southwestern Australian biodiversity hotspot.

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Samantha Vertucci

Full Text Available Southwest Australia (SWA is a global biodiversity hotspot and a centre of diversity and endemism for the Australo-Papuan myobatrachid frogs. Myobatrachus gouldii (the turtle frog has a highly derived morphology associated with its forward burrowing behaviour, largely subterranean habit, and unusual mode of reproduction. Its sister genera Metacrinia and Arenophryne have restricted distributions in Western Australia with significant phylogeographic structure, leading to the recent description of a new species in the latter. In contrast, Myobatrachus is distributed widely throughout SWA over multiple climatic zones, but little is known of its population structure, geographic variation in morphology, or reproduction. We generated molecular and morphological data to test for genetic and morphological variation, and to assess whether substrate specialisation in this species may have led to phylogeographic structuring similar to that of other plant and animal taxa in SWA. We assembled sequence data for one mitochondrial and four nuclear DNA loci (3628 base pairs for 42 turtle frogs sampled throughout their range. Likelihood phylogenetic analyses revealed shallow phylogeographic structure in the mtDNA locus (up to 3.3% genetic distance and little variation in three of the four nDNA loci. The mtDNA haplotype network suggests five geographically allopatric groups, with no shared haplotypes between regions. These geographic patterns are congruent with several other SWA species, with genetic groups restricted to major hydrological divisions, the Swan Coastal Plain, and the Darling Scarp. The geographically structured genetic groups showed no evidence of significant morphological differentiation (242 individuals, and there was little sexual size dimorphism, but subtle differences in reproductive traits suggest more opportunistic breeding in lower rainfall zones. Call data were compared to sister genera Metacrinia and Arenophryne and found to be highly

Terrestrial activity and conservation of adult California red-legged frogs Rana aurora draytonii in coastal forests and grasslands

Science.gov (United States)

Bulger, J.B.; Scott, N.J.; Seymour, R.B.

2003-01-01

The federally threatened California red-legged frog Rana aurora draytonii occupies both aquatic and terrestrial habitats in its adult life stage. The terrestrial activities of this species are not well known and require documentation to assist in the development of appropriate levels of protection under the US Endangered Species Act. We studied the terrestrial activities of radio-tagged red-legged frogs (n = 8-26) inhabiting a coastal watershed in Santa Cruz County, California, during 1997-1998. In particular, we investigated (1) the use of terrestrial habitats by non-migrating adults in relation to season, breeding chronology, and precipitation, and (2) adult migration behavior, including seasonal timing, duration, distances traveled, and the use of corridors. Non-migrating red-legged frogs occupied terrestrial habitats briefly (median = 4-6 days) following infrequent summer rains, but resided nearly continuously on land (median = 20-30 days) from the onset of the winter wet-season until breeding activities commenced 1-2 months later. All of the non-migrating frogs remained within 130 m of their aquatic site of residence (median days), despite frequent and copious rainfall. Adult migration to and from breeding sites occurred from late October through mid-May (wet season). We monitored 25 migration events between aquatic sites that were 200-2800 m apart. Short distance movements ( days, longer movements required up to 2 months. Most migrating frogs moved overland in approximately straight lines to target sites without apparent regard to vegetation type or topography. Riparian corridors were neither essential nor preferred as migration routes. Frogs traveling overland occurred in upland habitats as far as 500 m from water. Approximately 11-22% of the adult population was estimated to migrate to and from breeding sites annually, whereas the bulk of the adult population was resident at these sites. Adequate protection of red-legged frog populations inhabiting

Geochemical distribution of trace metals and organochlorine contaminants of a lake ontario shoreline marsh

Energy Technology Data Exchange (ETDEWEB)

Glooschenko, W A; Capocianco, J; Coburn, J; Glooschenko, V

1981-02-01

Rattray Marsh, an 8 ha marsh on the Lake Ontario shoreline at Mississauga, Ontario, is an important local habitat for waterfowl and shorebirds during spring and fall migration. A study was conducted to determine the distribution of nutrients (carbon, nitrogen, and phosphorus) and potential trace metal and organochlorine pollutants in the marsh as evidenced by the sedimentary concentrations of these compounds. Generally, copper, zinc, lead, and mercury were higher in concentration in local soils than in Lake Ontario sediments. Metals and organic carbon levels did not correlate, and the metals appeared to be associated with silts and clays. Organochlorine contaminants include p,p1-DDE, p,p1-DDD, p,p1-DDT, alpha-chlordane, PCB, mirex, and HCB.

Tidal exchange between a freshwater tidal marsh and an impacted estuary: the Scheldt estuary, Belgium

NARCIS (Netherlands)

van Damme, S.; Dehairs, F.; Tackx, M.; Beauchard, O.; Struyf, E.; Gribsholt, B.; van Cleemput, O.; Meire, P.

2009-01-01

Tidal marsh exchange studies are relatively simple tools to investigate the interaction between tidal marshes and estuaries. They have mostly been confined to only a few elements and to saltwater or brackish systems. This study presents mass-balance results of an integrated one year campaign in a

Modeling tidal freshwater marsh sustainability in the Sacramento-San Joaquin Delta under a broad suite of potential future scenarios

Science.gov (United States)

Swanson, Kathleen M.; Drexler, Judith Z.; Fuller, Christopher C.; Schoellhamer, David H.

2015-01-01

In this paper, we report on the adaptation and application of a one-dimensional marsh surface elevation model, the Wetland Accretion Rate Model of Ecosystem Resilience (WARMER), to explore the conditions that lead to sustainable tidal freshwater marshes in the Sacramento–San Joaquin Delta. We defined marsh accretion parameters to encapsulate the range of observed values over historic and modern time-scales based on measurements from four marshes in high and low energy fluvial environments as well as possible future trends in sediment supply and mean sea level. A sensitivity analysis of 450 simulations was conducted encompassing a range of eScholarship provides open access, scholarly publishing services to the University of California and delivers a dynamic research platform to scholars worldwide. porosity values, initial elevations, organic and inorganic matter accumulation rates, and sea-level rise rates. For the range of inputs considered, the magnitude of SLR over the next century was the primary driver of marsh surface elevation change. Sediment supply was the secondary control. More than 84% of the scenarios resulted in sustainable marshes with 88 cm of SLR by 2100, but only 32% and 11% of the scenarios resulted in surviving marshes when SLR was increased to 133 cm and 179 cm, respectively. Marshes situated in high-energy zones were marginally more resilient than those in low-energy zones because of their higher inorganic sediment supply. Overall, the results from this modeling exercise suggest that marshes at the upstream reaches of the Delta—where SLR may be attenuated—and high energy marshes along major channels with high inorganic sediment accumulation rates will be more resilient to global SLR in excess of 88 cm over the next century than their downstream and low-energy counterparts. However, considerable uncertainties exist in the projected rates of sea-level rise and sediment avail-ability. In addition, more research is needed to constrain future

Surface elevation dynamics in vegetated Spartina marshes versus unvegetated tidal ponds along the mid-Atlantic coast, USA, with implications to waterbirds

Science.gov (United States)

Erwin, R. Michael; Cahoon, Donald R.; Prosser, Diann J.; Sanders, Geoffrey; Hensel, Philippe

2006-01-01

Mid Atlantic coastal salt marshes contain a matrix of vegetation diversified by tidal pools, pannes, and creeks, providing habitats of varying importance to many species of breeding, migrating, and wintering waterbirds. We hypothesized that changes in marsh elevation were not sufficient to keep pace with those of sea level in both vegetated and unvegetated Spartina alterniflora sites at a number of mid lagoon marsh areas along the Atlantic coast. We also predicted that northern areas would suffer less of a deficit than would southern sites. Beginning in August 1998, we installed surface elevation tables at study sites on Cape Cod, Massachusetts, southern New Jersey, and two locations along Virginia's eastern shore. We compared these elevation changes over the 4-4.5 yr record with the long-term (> 50 yr) tidal records for each locale. We also collected data on waterbird use of these sites during all seasons of the year, based on ground surveys and replicated surveys from observation platforms. Three patterns of marsh elevation change were found. At Nauset Marsh, Cape Cod, the Spartina marsh surface tracked the pond surface, both keeping pace with regional sea-level rise rates. In New Jersey, the ponds are becoming deeper while marsh surface elevation remains unchanged from the initial reading. This may result in a submergence of the marsh in the future, assuming sea-level rise continues at current rates. Ponds at both Virginia sites are filling in, while marsh surface elevation rates do not seem to be keeping pace with local sea-level rise. An additional finding at all sites was that subsidence in the vegetated marsh surfaces was less than in unvegetated areas, reflecting the importance of the root mat in stabilizing sediments. The implications to migratory waterbirds are significant. Submergence of much of the lagoonal marsh area in Virginia and New Jersey over the next century could have major negative (i.e., flooding) effects on nesting populations of marsh

Hibernal habitat selection by Wood Frogs (Lithobates sylvaticus) in a northern New England montane landscape

Science.gov (United States)

Groff, Luke A.; Calhoun, Aram J.K.; Loftin, Cynthia S.

2016-01-01

Poikilothermic species, such as amphibians, endure harsh winter conditions via freeze-tolerance or freeze-avoidance strategies. Freeze-tolerance requires a suite of complex, physiological mechanisms (e.g., cryoprotectant synthesis); however, behavioral strategies (e.g., hibernal habitat selection) may be used to regulate hibernaculum temperatures and promote overwintering survival. We investigated the hibernal ecology of the freeze-tolerant Wood Frog (Lithobates sylvaticus) in north-central Maine. Our objectives were to characterize the species hibernaculum microclimate (temperature, relative humidity), evaluate hibernal habitat selection, and describe the spatial arrangement of breeding, post-breeding, and hibernal habitats. We monitored 15 frogs during two winters (2011/12: N = 10; 2012/13: N = 5), measured hibernal habitat features at micro (2 m) and macro (10 m) spatial scales, and recorded microclimate hourly in three strata (hibernaculum, leaf litter, ambient air). We compared these data to that of 57 random locations with logistic regression models, Akaike Information Criterion, and Kolmogorov–Smirnov tests. Hibernaculum microclimate was significantly different and less variable than leaf litter, ambient air, and random location microclimate. Model averaging indicated that canopy cover (−), leaf litter depth (+), and number of logs and stumps (+; microhabitat only) were important predictors of Wood Frog hibernal habitat. These habitat features likely act to insulate hibernating frogs from extreme and variable air temperatures. For example, decreased canopy cover facilitates increased snowpack depth and earlier snowpack accumulation and melt. Altered winter temperature and precipitation patterns attributable to climate change may reduce snowpack insulation, facilitate greater temperature variation in the underlying hibernacula, and potentially compromise Wood Frog winter survival.

Road Impacts on Abundance, Call Traits, and Body Size of Rainforest Frogs in Northeast Australia

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Conrad J. Hoskin

2010-09-01

Full Text Available Frogs are potentially sensitive indicators of road impacts, with studies indicating particular susceptibility to road mortality. Calling, i.e., breeding, behavior could also be affected by traffic noise. We investigated effects on frog abundance and calling behavior where a busy highway crosses rainforest stream breeding habitat in northeast Australia. Frog abundance was repeatedly surveyed along five stream transects during a summer breeding season. Abundance of two species, Litoria rheocola and Austrochaperina pluvialis, increased significantly with perpendicular distance from the road along two transects. No trends in abundance were detected for A. pluvialis on two other transects where it was common, or for Litoria serrata on one transect where abundance was sufficient for analysis. Both species with lowered abundance near the road, L. rheocola and A. pluvialis, are rare in road kill statistics along this highway, suggesting road mortality is not the cause of reduced frog abundance near the road. We postulate that lowered abundance may reflect traffic noise effects. We analyzed calls of the International Union for Conservation of Nature endangered species L. rheocola along the one stream transect on which it was common. We found significant trends in two call traits over a very fine scale: both call rate and dominant frequency were significantly higher closer to the road. Furthermore, males were significantly smaller closer to the road. These call and body size trends most likely reflect road impacts, but resolving these is complicated by correlations between traits. Potential mechanisms, effects on fitness, and management recommendations to mitigate the impacts of roads on frogs are outlined.

Modeling detection probability to improve marsh bird surveys in southern Canada and the Great Lakes states

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Douglas C. Tozer

2016-12-01

Full Text Available Marsh birds are notoriously elusive, with variation in detection probability across species, regions, seasons, and different times of day and weather. Therefore, it is important to develop regional field survey protocols that maximize detections, but that also produce data for estimating and analytically adjusting for remaining differences in detections. We aimed to improve regional field survey protocols by estimating detection probability of eight elusive marsh bird species throughout two regions that have ongoing marsh bird monitoring programs: the southern Canadian Prairies (Prairie region and the southern portion of the Great Lakes basin and parts of southern Québec (Great Lakes-St. Lawrence region. We accomplished our goal using generalized binomial N-mixture models and data from ~22,300 marsh bird surveys conducted between 2008 and 2014 by Bird Studies Canada's Prairie, Great Lakes, and Québec Marsh Monitoring Programs. Across all species, on average, detection probability was highest in the Great Lakes-St. Lawrence region from the beginning of May until mid-June, and then fell throughout the remainder of the season until the end of June; was lowest in the Prairie region in mid-May and then increased throughout the remainder of the season until the end of June; was highest during darkness compared with light; and did not vary significantly according to temperature (range: 0-30°C, cloud cover (0%-100%, or wind (0-20 kph, or during morning versus evening. We used our results to formulate improved marsh bird survey protocols for each region. Our analysis and recommendations are useful and contribute to conservation of wetland birds at various scales from local single-species studies to the continental North American Marsh Bird Monitoring Program.

Wind-Driven Sea-Level Variation Influences Dynamics of Salt Marsh Vegation

DEFF Research Database (Denmark)

Kim, Daehyun; Cairns, David; Bartholdy, Jesper

2011-01-01

Long-term variation of mean sea level has been considered the primary exogenous factor of vegetation dynamics in salt marshes. In this study, we address the importance of short-term, wind-induced rise of the sea surface in such biogeographic changes. There was an unusual opportunity for examining......, waterlogging of marsh soils, which has retarded ecological succession. To conclude, we stress the need for a multitemporal perspective that recognizes the significance of short-term sea-level fluctuations nested within long-term trends......) continuous sedimentation with spatial variability (2.0–4.0 mm yr-1), (3) increased frequency of over-marsh flooding events, and (4) contemporary dominance of Halimione portulacoides, indicating little progressive succession toward a later phase. Conventionally, recent eustatic sea-level rise was believed...... to drive the increased frequency of flooding and such retarded succession. Skallingen, however, has showed more or less equilibrated yearly rates between sea-level rise and surface accretion. This implies that the long-term, gradual sea-level rise alone might not be enough to explain the increased...

Autometallographic tracing of mercury in frog liver

International Nuclear Information System (INIS)

Loumbourdis, N.S.; Danscher, G.

2004-01-01

The distribution of mercury in the liver of the frog Rana ridibunda with the autometallographic method was investigated. The mercury specific autometallographic (HgS/Se AMG ) technique is a sensitive histochemical approach for tracing mercury in tissues from mercury-exposed organisms. Mercury accumulates in vivo as mercury sulphur/mercury selenium nanocrystals that can be silver-enhanced. Thus, only a fraction of the Hg can be visualized. Six animals were exposed for one day and another group of six animals for 6 days in 1 ppm mercury (as HgCI 2 ) dissolved in fresh water. A third group of six animals, served as controls, were sacrificed the day of arrival at the laboratory. First, mercury appears in the blood plasma and erythrocytes. Next, mercury moves to hepatocytes and in the apical part of the cells, that facing bile canaliculi. In a next step, mercury appears in the endothelial and Kupffer cells. It seems likely that, the mercury of hepatocytes moves through bile canaliculi to the gut, most probably bound to glutathione and/or other similar ligands. Most probably, the endothelial and Kupffer cells comprise the first line of defense against metal toxicity. - Frogs can be good bioindicators of mercury

Exploring mechanisms of compaction in salt-marsh sediments using Common Era relative sea-level reconstructions

Science.gov (United States)

Brain, Matthew J.; Kemp, Andrew C.; Hawkes, Andrea D.; Engelhart, Simon E.; Vane, Christopher H.; Cahill, Niamh; Hill, Troy D.; Donnelly, Jeffrey P.; Horton, Benjamin P.

2017-07-01

Salt-marsh sediments provide precise and near-continuous reconstructions of Common Era relative sea level (RSL). However, organic and low-density salt-marsh sediments are prone to compaction processes that cause post-depositional distortion of the stratigraphic column used to reconstruct RSL. We compared two RSL reconstructions from East River Marsh (Connecticut, USA) to assess the contribution of mechanical compression and biodegradation to compaction of salt-marsh sediments and their subsequent influence on RSL reconstructions. The first, existing reconstruction ('trench') was produced from a continuous sequence of basal salt-marsh sediment and is unaffected by compaction. The second, new reconstruction is from a compaction-susceptible core taken at the same location. We highlight that sediment compaction is the only feasible mechanism for explaining the observed differences in RSL reconstructed from the trench and core. Both reconstructions display long-term RSL rise of ∼1 mm/yr, followed by a ∼19th Century acceleration to ∼3 mm/yr. A statistically-significant difference between the records at ∼1100 to 1800 CE could not be explained by a compression-only geotechnical model. We suggest that the warmer and drier conditions of the Medieval Climate Anomaly (MCA) resulted in an increase in sediment compressibility during this time period. We adapted the geotechnical model by reducing the compressive strength of MCA sediments to simulate this softening of sediments. 'Decompaction' of the core reconstruction with this modified model accounted for the difference between the two RSL reconstructions. Our results demonstrate that compression-only geotechnical models may be inadequate for estimating compaction and post-depositional lowering of susceptible organic salt-marsh sediments in some settings. This has important implications for our understanding of the drivers of sea-level change. Further, our results suggest that future climate changes may make salt

Dynamics and fate of SOC in tidal marshes along a salinity gradient (Scheldt estuary, Belgium)

Science.gov (United States)

Van de Broek, Marijn; Temmermann, Stijn; Merckx, Roel; Wang, Zhengang; Govers, Gerard

2016-04-01

Coastal ecosystems have been attributed the potential to store large amounts of organic carbon (OC), often referred to as blue carbon, of which a considerable amount is stored in tidal marsh soils. Large uncertainties still exist with respect to the amount and controlling factors of soil organic carbon (SOC) stored in these ecosystems. Moreover, most research has focused on SOC dynamics of saltmarshes, while brackish and freshwater marshes are often even more productive and thus receive even larger organic carbon inputs. Therefore, in this study the OC dynamics of tidal marsh soils along an estuarine gradient are studied in order to contribute to our knowledge of 1) the stocks, 2) the controlling factors and 3) the fate of SOC in tidal marshes with different environmental characteristics. This research thus contributes to a better understanding of the potential of coastal environments to store organic carbon under future climatic changes. Soil and vegetation samples are collected in tidal salt-, brackish- and freshwater marshes in the Scheldt estuary (Belgium - The Netherlands). At each tidal marsh, three replicate soil cores up to 1.5m depth in 0.03m increments are collected at locations with both a low and a high elevation. These cores are analyzed for OC, stable C and N isotopes, bulk density and texture. Incubation experiments of topsoil samples were conducted and both aboveground and belowground biomass were collected. The results show that SOC stocks (range: 13,5 - 35,4 kg OC m-2), standing biomass (range: 2000 - 7930 g DW m-2) and potential soil respiration of CO2 (range: 0,03 - 0,12 % per unit OC per day) decrease with increasing salinity. This shows that both the amount of OC from local macrophytes and the quality of the organic matter are important factors controlling the SOC stocks. In addition, based on the analysis of stable C and N isotopes, it appears that when a significant fraction of SOC is derived from local macrophytes, higher SOC stocks are

Calling at the highway: The spatiotemporal constraint of road noise on Pacific chorus frog communication.

Science.gov (United States)

Nelson, Danielle V; Klinck, Holger; Carbaugh-Rutland, Alexander; Mathis, Codey L; Morzillo, Anita T; Garcia, Tiffany S

2017-01-01

Loss of acoustic habitat due to anthropogenic noise is a key environmental stressor for vocal amphibian species, a taxonomic group that is experiencing global population declines. The Pacific chorus frog ( Pseudacris regilla ) is the most common vocal species of the Pacific Northwest and can occupy human-dominated habitat types, including agricultural and urban wetlands. This species is exposed to anthropogenic noise, which can interfere with vocalizations during the breeding season. We hypothesized that Pacific chorus frogs would alter the spatial and temporal structure of their breeding vocalizations in response to road noise, a widespread anthropogenic stressor. We compared Pacific chorus frog call structure and ambient road noise levels along a gradient of road noise exposures in the Willamette Valley, Oregon, USA. We used both passive acoustic monitoring and directional recordings to determine source level (i.e., amplitude or volume), dominant frequency (i.e., pitch), call duration, and call rate of individual frogs and to quantify ambient road noise levels. Pacific chorus frogs were unable to change their vocalizations to compensate for road noise. A model of the active space and time ("spatiotemporal communication") over which a Pacific chorus frog vocalization could be heard revealed that in high-noise habitats, spatiotemporal communication was drastically reduced for an individual. This may have implications for the reproductive success of this species, which relies on specific call repertoires to portray relative fitness and attract mates. Using the acoustic call parameters defined by this study (frequency, source level, call rate, and call duration), we developed a simplified model of acoustic communication space-time for this species. This model can be used in combination with models that determine the insertion loss for various acoustic barriers to define the impact of anthropogenic noise on the radius of communication in threatened species

Environmental extremes and biotic interactions facilitate depredation of endangered California Ridgway’s rail in a San Francisco Bay tidal marsh

Science.gov (United States)

Overton, Cory T.; Bobzien, Steven; Grefsrud, Marcia

2016-01-01

On 23 December 2015 while performing a high tide population survey for endangered Ridgway’s rails (Rallus obsoletus obsoletus; formerly known as the California clapper rail) and other rail species at Arrowhead Marsh, Martin Luther King Jr. Regional Shoreline, Oakland, California, the authors observed a series of species interactions resulting in the predation of a Ridgway’s rail by an adult female peregrine falcon (Falco peregrinus). High tide surveys are performed during the highest tides of the year when tidal marsh vegetation at Arrowhead Marsh becomes inundated, concentrating the tidal marsh obligate species into the limited area of emergent vegetation remaining as refuge cover. Annual mean tide level (elevation referenced relative to mean lower low water) at Arrowhead Marsh is 1.10 m, mean higher high water is 2.04 m (NOAA National Ocean Service 2014) and the average elevation of the marsh surface is 1.60 m (Overton et al. 2014). Tidal conditions on the day of the survey were predicted to be 2.42 m. Observed tides at the nearby Alameda Island tide gauge were 8 cm higher than predicted due to a regional low-pressure system and warmer than average sea surface temperatures (NOAA National Ocean Service 2014). The approximately 80 cm deep inundation of the marsh plain was sufficient to completely submerge tidal marsh vegetation and effectively remove 90% of refugia habitats.

Short term changes in hydroperiod after thin layer sediment placement on a New Jersey salt marsh and implications for design

Science.gov (United States)

Piercy, C.; Carrillo, C. C.; VanZomeren, C. M.; Berkowitz, J.; Chasten, M. A.; Golden, D.; Jahn, J.; Welp, T. L.; Yepsen, M.

2017-12-01

Over the winter of 2015-2016, the U.S. Army Corps of Engineers Philadelphia District partnered with New Jersey Department of Environmental Protection, The Nature Conservancy, Green Trust Alliance, Green Vest, and Princeton Hydro to implement a wetland thin layer placement on a salt marsh to the west of Avalon, New Jersey using dredged sediments removed from the Federal navigation channel in response to impacts from Hurricane Sandy. Prior to sediment placement, the marsh exhibited signs of degradation, including fragmentation of the marsh plain. The marsh is characterized by large, open water areas ( 1 m deep) fringed with overhanging banks and punctuated by small remnant ( 1-5 m) islands of intact marsh. The objective of the placement effort was to increase the elevation of degraded marsh areas to a level commensurate with the growth of low marsh vegetation dominated by Spartina alterniflora Loisel and to provide a small ( 5-15 cm) elevation boost to vegetated marsh areas surrounding the open water pools. We examine changes in inundation and tidal exchange resulting from the thin layer placement immediately after placement and a year later. Changes in sediment grain size and other factors are also considered. Coupling hydrologic measurements with observed vegetation recovery, we identify target elevations and sediment depths relative to mean sea level and mean high water consistent with rapid recovery in initially vegetated and open water areas.

Apomorphine effects on frog locomotor behavior

OpenAIRE

Chu, Joanne; Wilczynski, Walter

2007-01-01

The neuroanatomical pathways of the DA systems have been shown to be largely conserved across many vertebrate taxa. It is less certain whether the structural similarities seen between mammals and amphibians reflect a similar functional homology. DA is well known for its role in facilitating motor behaviors in mammals. We examined whether a similar role for DA exists in amphibians using the Northern Leopard Frog (Rana pipiens). We investigated the effects of the nonspecific DA agonist, apomorp...

SU-E-T-510: Interplay Between Spots Sizes, Spot / Line Spacing and Motion in Spot Scanning Proton Therapy

International Nuclear Information System (INIS)

Lee, TK

2015-01-01

Purpose In proton beam configuration for spot scanning proton therapy (SSPT), one can define the spacing between spots and lines of scanning as a ratio of given spot size. If the spacing increases, the number of spots decreases which can potentially decrease scan time, and so can whole treatment time, and vice versa. However, if the spacing is too large, the uniformity of scanned field decreases. Also, the field uniformity can be affected by motion during SSPT beam delivery. In the present study, the interplay between spot/ line spacing and motion is investigated. Methods We used four Gaussian-shape spot sizes with 0.5cm, 1.0cm, 1.5cm, and 2.0cm FWHM, three spot/line spacing that creates uniform field profile which are 1/3*FWHM, σ/3*FWHM and 2/3*FWHM, and three random motion amplitudes within, +/−0.3mm, +/−0.5mm, and +/−1.0mm. We planned with 2Gy uniform single layer of 10×10cm2 and 20×20cm2 fields. Then, mean dose within 80% area of given field size, contrubuting MU per each spot assuming 1cGy/MU calibration for all spot sizes, number of spots and uniformity were calculated. Results The plans with spot/line spacing equal to or smaller than 2/3*FWHM without motion create ∼100% uniformity. However, it was found that the uniformity decreases with increased spacing, and it is more pronounced with smaller spot sizes, but is not affected by scanned field sizes. Conclusion It was found that the motion during proton beam delivery can alter the dose uniformity and the amount of alteration changes with spot size which changes with energy and spot/line spacing. Currently, robust evaluation in TPS (e.g. Eclipse system) performs range uncertainty evaluation using isocenter shift and CT calibration error. Based on presented study, it is recommended to add interplay effect evaluation to robust evaluation process. For future study, the additional interplay between the energy layers and motion is expected to present volumetric effect

The Stalled Recovery of the Iraqi Marshes

Directory of Open Access Journals (Sweden)

Richard H. Becker

2014-01-01

Full Text Available The Iraqi (Mesopotamian Marshes, an extensive wetlands system in Iraq, has been heavily impacted by both human and climate forces over the past decades. In the period leading up to the Second Gulf War in 2002, the marshlands were shrinking due to both a policy of draining and water diversion in Iraq and construction of dams upstream on the Tigris and Euphrates rivers. Following the war through 2006, this trend was reversed as the diversions were removed and active draining stopped. A combination of MODIS and GRACE datasets were used to determine the change in surface water area (SWA in the marshes, marshland extent and change in mass both upriver in the Tigris and Euphrates watersheds and in the marshlands. Results suggest that the post war dam removal and decreased pumping in 2003 provided only temporary respite for the marshlands (2003–2006 SWA: 1,477 km2 increase (600%, water equivalent depth (WED: +2.0 cm/yr.; 2006–2009: −860 km2 (−41% WED: −3.9 cm/yr.. Unlike in the period 2003–2006, from 2006 forward the mass variations in the marshes are highly correlated with those in the upper and middle watershed (R = 0.86 and 0.92 respectively, suggesting that any recovery due to that removal is complete, and that all future changes are tied more strongly to any climate changes that will affect recharge in the upper Tigris-Euphrates system. Precipitation changes in the watershed show a reduction of an average of 15% below the 15 yr mean in 2007–2011 This corresponds with published ensemble predictions for the 2071–2099 time period, that suggested similar marshland shrinkage should be expected in that time period.

Nitrogen removal through N cycling from sediments in a constructed coastal marsh as assessed by 15N-isotope dilution.

Science.gov (United States)

Ro, Hee-Myong; Kim, Pan-Gun; Park, Ji-Suk; Yun, Seok-In; Han, Junho

2018-04-01

Constructed coastal marsh regulates land-born nitrogen (N) loadings through salinity-dependent microbial N transformation processes. A hypothesis that salinity predominantly controls N removal in marsh was tested through incubation in a closed system with added- 15 NH 4 + using sediments collected from five sub-marshes in Shihwa marsh, Korea. Time-course patterns of concentrations and 15 N-atom% of soil-N pools were analyzed. Sediments having higher salinity and lower soil organic-C and acid-extractable organic-N exhibited slower rates of N mineralization and immobilization, nitrification, and denitrification. Rates of denitrification were not predicted well by sediment salinity but by its organic-C, indicating heterotrophic denitrification. Denitrification dominated N-loss from this marsh, and nitrogen removal capacity of this marsh was estimated at 337 kg N day -1 (9.9% of the daily N-loadings) considering the current rooting depth of common reeds (1.0 m). We showed that sediment N removal decreases with increasing salinity and can increase with increasing organic-C for heterotrophic denitrification. Copyright © 2018 Elsevier Ltd. All rights reserved.

Endemic infection of the amphibian chytrid fungus in a frog community post-decline.