WorldWideScience

Sample records for source integrated taxonomic

  1. Marine Actinobacteria as a source of compounds for phytopathogen control: An integrative metabolic-profiling / bioactivity and taxonomical approach.

    Directory of Open Access Journals (Sweden)

    Luz A Betancur

    Full Text Available Marine bacteria are considered as promising sources for the discovery of novel biologically active compounds. In this study, samples of sediment, invertebrate and algae were collected from the Providencia and Santa Catalina coral reef (Colombian Caribbean Sea with the aim of isolating Actinobateria-like strain able to produce antimicrobial and quorum quenching compounds against pathogens. Several approaches were used to select actinobacterial isolates, obtaining 203 strains from all samples. According to their 16S rRNA gene sequencing, a total of 24 strains was classified within Actinobacteria represented by three genera: Streptomyces, Micromonospora, and Gordonia. In order to assess their metabolic profiles, the actinobacterial strains were grown in liquid cultures, and LC-MS-based analyses from ethyl acetate fractions were performed. Based on taxonomical classification, screening information of activity against phytopathogenic strains and quorum quenching activity, as well as metabolic profiling, six out of the 24 isolates were selected for follow-up with chemical isolation and structure identification analyses of putative metabolites involved in antimicrobial activities.

  2. Marine Actinobacteria as a source of compounds for phytopathogen control: An integrative metabolic-profiling / bioactivity and taxonomical approach

    Science.gov (United States)

    Betancur, Luz A.; Naranjo-Gaybor, Sandra J.; Vinchira-Villarraga, Diana M.; Moreno-Sarmiento, Nubia C.; Maldonado, Luis A.; Suarez-Moreno, Zulma R.; Acosta-González, Alejandro; Padilla-Gonzalez, Gillermo F.; Puyana, Mónica; Castellanos, Leonardo; Ramos, Freddy A.

    2017-01-01

    Marine bacteria are considered as promising sources for the discovery of novel biologically active compounds. In this study, samples of sediment, invertebrate and algae were collected from the Providencia and Santa Catalina coral reef (Colombian Caribbean Sea) with the aim of isolating Actinobateria-like strain able to produce antimicrobial and quorum quenching compounds against pathogens. Several approaches were used to select actinobacterial isolates, obtaining 203 strains from all samples. According to their 16S rRNA gene sequencing, a total of 24 strains was classified within Actinobacteria represented by three genera: Streptomyces, Micromonospora, and Gordonia. In order to assess their metabolic profiles, the actinobacterial strains were grown in liquid cultures, and LC-MS-based analyses from ethyl acetate fractions were performed. Based on taxonomical classification, screening information of activity against phytopathogenic strains and quorum quenching activity, as well as metabolic profiling, six out of the 24 isolates were selected for follow-up with chemical isolation and structure identification analyses of putative metabolites involved in antimicrobial activities. PMID:28225766

  3. Integrating DNA barcode data and taxonomic practice: determination, discovery, and description.

    Science.gov (United States)

    Goldstein, Paul Z; DeSalle, Rob

    2011-02-01

    DNA barcodes, like traditional sources of taxonomic information, are potentially powerful heuristics in the identification of described species but require mindful analytical interpretation. The role of DNA barcoding in generating hypotheses of new taxa in need of formal taxonomic treatment is discussed, and it is emphasized that the recursive process of character evaluation is both necessary and best served by understanding the empirical mechanics of the discovery process. These undertakings carry enormous ramifications not only for the translation of DNA sequence data into taxonomic information but also for our comprehension of the magnitude of species diversity and its disappearance. This paper examines the potential strengths and pitfalls of integrating DNA sequence data, specifically in the form of DNA barcodes as they are currently generated and analyzed, with taxonomic practice.

  4. MetaMeta: integrating metagenome analysis tools to improve taxonomic profiling.

    Science.gov (United States)

    Piro, Vitor C; Matschkowski, Marcel; Renard, Bernhard Y

    2017-08-14

    Many metagenome analysis tools are presently available to classify sequences and profile environmental samples. In particular, taxonomic profiling and binning methods are commonly used for such tasks. Tools available among these two categories make use of several techniques, e.g., read mapping, k-mer alignment, and composition analysis. Variations on the construction of the corresponding reference sequence databases are also common. In addition, different tools provide good results in different datasets and configurations. All this variation creates a complicated scenario to researchers to decide which methods to use. Installation, configuration and execution can also be difficult especially when dealing with multiple datasets and tools. We propose MetaMeta: a pipeline to execute and integrate results from metagenome analysis tools. MetaMeta provides an easy workflow to run multiple tools with multiple samples, producing a single enhanced output profile for each sample. MetaMeta includes a database generation, pre-processing, execution, and integration steps, allowing easy execution and parallelization. The integration relies on the co-occurrence of organisms from different methods as the main feature to improve community profiling while accounting for differences in their databases. In a controlled case with simulated and real data, we show that the integrated profiles of MetaMeta overcome the best single profile. Using the same input data, it provides more sensitive and reliable results with the presence of each organism being supported by several methods. MetaMeta uses Snakemake and has six pre-configured tools, all available at BioConda channel for easy installation (conda install -c bioconda metameta). The MetaMeta pipeline is open-source and can be downloaded at: https://gitlab.com/rki_bioinformatics .

  5. Different Influences on Lexical Priming for Integrative, Thematic, and Taxonomic Relations

    Directory of Open Access Journals (Sweden)

    Lara L. Jones

    2012-07-01

    Full Text Available Word pairs may be integrative (i.e., combination of two concepts into one meaningful entity; e.g., fruit - cake, thematically related (i.e., connected in time and place; e.g., party - cake, and/or taxonomically related (i.e., shared features and category co-members; e.g., muffin - cake. Using participant ratings and computational measures, we demonstrated distinct patterns across measures of similarity and co-occurrence, and familiarity for each relational construct in two different item sets. Overall, target RTs and priming magnitudes were consistent across the SOAs for both item sets. However, results of a standard lexical decision task with various delays between prime and target presentation further demonstrated distinct patterns among these three relations on some of the underlying measures influencing target word recognition (LSA, Google, and BEAGLE. These distinct patterns suggest different mechanisms of lexical priming and further demonstrate that integrative relations are distinct from thematic and taxonomic relations.

  6. Highly polytypic taxon complex: interspecific and intraspecific integrative taxonomic assessment of the widespread pollinator Bombus pascuorum Scopoli 1763 (Hymenoptera: Apidae)

    Czech Academy of Sciences Publication Activity Database

    Lecocq, T.; Brasero, N.; Martinet, B.; Valterová, Irena; Rasmont, P.

    2015-01-01

    Roč. 40, č. 4 (2015), s. 881-890 ISSN 0307-6970 Institutional support: RVO:61388963 Keywords : integrative taxonomic approach * labial gland secretions * genetic markers * colour pattern Subject RIV: CC - Organic Chemistry Impact factor: 3.343, year: 2015

  7. Sourcing teams and interdepartmental integration

    DEFF Research Database (Denmark)

    Lidegaard, Nina; Ellegaard, Chris; Møller, Morten Munkgaard

    2015-01-01

    Internal integration is often mentioned as a prerequisite for conducting strategic sourcing, as multiple functional departments must collaborate on creating value-creating activities amongst them. Though it is one of many possibilities, the use of cross-functional teams is often the most commonly...... proposed solution to ensure internal integration. This paper presents an exploratory case study evaluating the use of internal integration mechanisms in a cross-functional sourcing process. Two commodity categories are examined. One is organised in a cross-functional team, while the other is not. Findings...... indicate that informal integration mechanisms not promoted by management or the organizational structure may contribute to the overall level of integration....

  8. Evolution of microgastropods (Ellobioidea, Carychiidae): integrating taxonomic, phylogenetic and evolutionary hypotheses

    Science.gov (United States)

    2013-01-01

    Background Current biodiversity patterns are considered largely the result of past climatic and tectonic changes. In an integrative approach, we combine taxonomic and phylogenetic hypotheses to analyze temporal and geographic diversification of epigean (Carychium) and subterranean (Zospeum) evolutionary lineages in Carychiidae (Eupulmonata, Ellobioidea). We explicitly test three hypotheses: 1) morphospecies encompass unrecognized evolutionary lineages, 2) limited dispersal results in a close genetic relationship of geographical proximally distributed taxa and 3) major climatic and tectonic events had an impact on lineage diversification within Carychiidae. Results Initial morphospecies assignments were investigated by different molecular delimitation approaches (threshold, ABGD, GMYC and SP). Despite a conservative delimitation strategy, carychiid morphospecies comprise a great number of unrecognized evolutionary lineages. We attribute this phenomenon to historic underestimation of morphological stasis and phenotypic variability amongst lineages. The first molecular phylogenetic hypothesis for the Carychiidae (based on COI, 16S and H3) reveals Carychium and Zospeum to be reciprocally monophyletic. Geographical proximally distributed lineages are often closely related. The temporal diversification of Carychiidae is best described by a constant rate model of diversification. The evolution of Carychiidae is characterized by relatively few (long distance) colonization events. We find support for an Asian origin of Carychium. Zospeum may have arrived in Europe before extant members of Carychium. Distantly related Carychium clades inhabit a wide spectrum of the available bioclimatic niche and demonstrate considerable niche overlap. Conclusions Carychiid taxonomy is in dire need of revision. An inferred wide distribution and variable phenotype suggest underestimated diversity in Zospeum. Several Carychium morphospecies are results of past taxonomic lumping. By collecting

  9. Quantifying biological integrity by taxonomic completeness: its utility in regional and global assessments.

    Science.gov (United States)

    Hawkins, Charles P

    2006-08-01

    Water resources managers and conservation biologists need reliable, quantitative, and directly comparable methods for assessing the biological integrity of the world's aquatic ecosystems. Large-scale assessments are constrained by the lack of consistency in the indicators used to assess biological integrity and our current inability to translate between indicators. In theory, assessments based on estimates of taxonomic completeness, i.e., the proportion of expected taxa that were observed (observed/expected, O/E) are directly comparable to one another and should therefore allow regionally and globally consistent summaries of the biological integrity of freshwater ecosystems. However, we know little about the true comparability of O/E assessments derived from different data sets or how well O/E assessments perform relative to other indicators in use. I compared the performance (precision, bias, and sensitivity to stressors) of O/E assessments based on five different data sets with the performance of the indicators previously applied to these data (three multimetric indices, a biotic index, and a hybrid method used by the state of Maine). Analyses were based on data collected from U.S. stream ecosystems in North Carolina, the Mid-Atlantic Highlands, Maine, and Ohio. O/E assessments resulted in very similar estimates of mean regional conditions compared with most other indicators once these indicators' values were standardized relative to reference-site means. However, other indicators tended to be biased estimators of O/E, a consequence of differences in their response to natural environmental gradients and sensitivity to stressors. These results imply that, in some cases, it may be possible to compare assessments derived from different indicators by standardizing their values (a statistical approach to data harmonization). In situations where it is difficult to standardize or otherwise harmonize two or more indicators, O/E values can easily be derived from existing

  10. On Hubbell's rectangular source integral

    International Nuclear Information System (INIS)

    Stalker, John

    2001-01-01

    The integral H(a,b)=∫ 0 b ∫ 0 a dx dy/(1+x 2 +y 2 ) arises naturally in the study of radiation from a rectangular source and has been studied by many authors. This paper introduces a new series expansion which is rapidly convergent for large a and b

  11. Taxonomic minimalism.

    Science.gov (United States)

    Beattle, A J; Oliver, I

    1994-12-01

    Biological surveys are in increasing demand while taxonomic resources continue to decline. How much formal taxonomy is required to get the job done? The answer depends on the kind of job but it is possible that taxonomic minimalism, especially (1) the use of higher taxonomic ranks, (2) the use of morphospecies rather than species (as identified by Latin binomials), and (3) the involvement of taxonomic specialists only for training and verification, may offer advantages for biodiversity assessment, environmental monitoring and ecological research. As such, formal taxonomy remains central to the process of biological inventory and survey but resources may be allocated more efficiently. For example, if formal Identification is not required, resources may be concentrated on replication and increasing sample sizes. Taxonomic minimalism may also facilitate the inclusion in these activities of important but neglected groups, especially among the invertebrates, and perhaps even microorganisms. Copyright © 1994. Published by Elsevier Ltd.

  12. Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation

    Energy Technology Data Exchange (ETDEWEB)

    Noecker, Cecilia; Eng, Alexander; Srinivasan, Sujatha; Theriot, Casey M.; Young, Vincent B.; Jansson, Janet K.; Fredricks, David N.; Borenstein, Elhanan; Sanchez, Laura M.

    2015-12-22

    ABSTRACT

    Multiple molecular assays now enable high-throughput profiling of the ecology, metabolic capacity, and activity of the human microbiome. However, to date, analyses of such multi-omic data typically focus on statistical associations, often ignoring extensive prior knowledge of the mechanisms linking these various facets of the microbiome. Here, we introduce a comprehensive framework to systematically link variation in metabolomic data with community composition by utilizing taxonomic, genomic, and metabolic information. Specifically, we integrate available and inferred genomic data, metabolic network modeling, and a method for predicting community-wide metabolite turnover to estimate the biosynthetic and degradation potential of a given community. Our framework then compares variation in predicted metabolic potential with variation in measured metabolites’ abundances to evaluate whether community composition can explain observed shifts in the community metabolome, and to identify key taxa and genes contributing to the shifts. Focusing on two independent vaginal microbiome data sets, each pairing 16S community profiling with large-scale metabolomics, we demonstrate that our framework successfully recapitulates observed variation in 37% of metabolites. Well-predicted metabolite variation tends to result from disease-associated metabolism. We further identify several disease-enriched species that contribute significantly to these predictions. Interestingly, our analysis also detects metabolites for which the predicted variation negatively correlates with the measured variation, suggesting environmental control points of community metabolism. Applying this framework to gut microbiome data sets reveals similar trends, including prediction of bile acid metabolite shifts. This framework is an important first step toward a system-level multi-omic integration and an improved mechanistic understanding of the microbiome activity and dynamics in

  13. Integration of morphological data sets for phylogenetic analysis of Amniota: the importance of integumentary characters and increased taxonomic sampling.

    Science.gov (United States)

    Hill, Robert V

    2005-08-01

    Several mutually exclusive hypotheses have been advanced to explain the phylogenetic position of turtles among amniotes. Traditional morphology-based analyses place turtles among extinct anapsids (reptiles with a solid skull roof), whereas more recent studies of both morphological and molecular data support an origin of turtles from within Diapsida (reptiles with a doubly fenestrated skull roof). Evaluation of these conflicting hypotheses has been hampered by nonoverlapping taxonomic samples and the exclusion of significant taxa from published analyses. Furthermore, although data from soft tissues and anatomical systems such as the integument may be particularly relevant to this problem, they are often excluded from large-scale analyses of morphological systematics. Here, conflicting hypotheses of turtle relationships are tested by (1) combining published data into a supermatrix of morphological characters to address issues of character conflict and missing data; (2) increasing taxonomic sampling by more than doubling the number of operational taxonomic units to test internal relationships within suprageneric ingroup taxa; and (3) increasing character sampling by approximately 25% by adding new data on the osteology and histology of the integument, an anatomical system that has been historically underrepresented in morphological systematics. The morphological data set assembled here represents the largest yet compiled for Amniota. Reevaluation of character data from prior studies of amniote phylogeny favors the hypothesis that turtles indeed have diapsid affinities. Addition of new ingroup taxa alone leads to a decrease in overall phylogenetic resolution, indicating that existing characters used for amniote phylogeny are insufficient to explain the evolution of more highly nested taxa. Incorporation of new data from the soft and osseous components of the integument, however, helps resolve relationships among both basal and highly nested amniote taxa. Analysis of a

  14. Evaluation of diffuse hepatic diseases by integrated image, SPECT and numerical taxonomic analysis

    Energy Technology Data Exchange (ETDEWEB)

    Kobayashi, Shin

    1987-02-01

    In 135 patients with various hepatic diseases, cardiopulmonary circulation and hepatic accumulation of the activity were collected for 100 sec after bolus injection of 111-222 MBq (3 - 6 mci) of /sup 99m/Tc-phytate, and then integrated as a single image. Anterior, right lateral and posterior planar images, and hepatosplenic SPECT images were obtained thereafter. Lung to liver count ratio (P/L) was estimated by the integrated image. Liver volume (HV), spleen volume (SV) and liver to spleen count ratio (MHC/MSC) were calculated using the data obtained by SPECT. P/L was useful as an index of effective hepatic blood flow. MHC/MSC was closely correlated with the grade of portal hypertension. HV or SV alone shows low clinical value in discriminating liver diseases. Principal component analysis was applied to the 4 above-mentioned radinuclide data and the following 11 laboratory data ; total serum protein, serum albumine, glutamate oxaloacetate transaminase (GOT), glutamate pyruvate transaminase (GPT), lactic dehydrogenase (LDH), alkaline phosphatase (AL-P), zink sulfateturbidity test (ZTT), thymol turbidity test (TTT), r-glutamyl transpeptidase (r-GTP), cholinesterase (Ch-E), and total bilirubin (T-Bil). These fifteen data were condensed to 5 principal components. And then cluster analysis was carried out among 135 patients. The subjects were classified in 7 small groups. In group (G) I to GIII, frequency of liver cirrhosis was high, while on the contrary in GIV to GVII, the frequency of normal cases increased gradually. From the above results, cluster analysis seemed to reflect the pathophysiological state and the grade of the disease. This method might be useful for estimation of the grade of damage in diffuse hepatic disease and a good objective evaluation method in follow-up studies. (J.P.N.).

  15. Learning models for multi-source integration

    Energy Technology Data Exchange (ETDEWEB)

    Tejada, S.; Knoblock, C.A.; Minton, S. [Univ. of Southern California/ISI, Marina del Rey, CA (United States)

    1996-12-31

    Because of the growing number of information sources available through the internet there are many cases in which information needed to solve a problem or answer a question is spread across several information sources. For example, when given two sources, one about comic books and the other about super heroes, you might want to ask the question {open_quotes}Is Spiderman a Marvel Super Hero?{close_quotes} This query accesses both sources; therefore, it is necessary to have information about the relationships of the data within each source and between sources to properly access and integrate the data retrieved. The SIMS information broker captures this type of information in the form of a model. All the information sources map into the model providing the user a single interface to multiple sources.

  16. Rectangular source integral and recurrence relations

    International Nuclear Information System (INIS)

    Prabha, Hem

    2007-01-01

    In this paper Hubbell's rectangular source integral H'(a,b), which is a double integral, is expressed as a series of many converging single integrals I n (a,b). Recurrence relations relate these integrals. Once one integral I 1 is computed, recurrence relations are used to compute other integrals. I 1 (a,b) can be computed analytically. H'(a,b) is approximated by considering the first seven terms in the series and the results are found to give good results for various values of a and b. Results are presented for the values of a and b (0.1 to 20 and to 2), respectively. The rate of convergence depends on the values of a and b

  17. C-188 cobalt-60 sealed source integrity: source monitoring

    International Nuclear Information System (INIS)

    Defalco, G.M.; Shah, V.

    1995-01-01

    The integrity of C-188 cobalt-60 sealed sources used for radiation processing will be a key factor in the continued industrial acceptance and growth of gamma irradiation technology. Given the public's relatively poor understanding of most nuclear topics and the news media's tendency to sensationalize events, it is appropriate for suppliers and users of gamma technology to be vigilant and conservative regarding the application of cobalt-60 sources to industrial purposes. Nordion's recent decision to extend the optional warranty on its C-188 cobalt-60 sealed source from 15 years to 20 years is based on over 30 years of data generated from its on-going SOURCE SURVEILLANCE PROGRAM. This paper presents an overview of the C-188 SOURCE SURVEILLANCE PROGRAM. (author)

  18. A Source Identification Algorithm for INTEGRAL

    Science.gov (United States)

    Scaringi, Simone; Bird, Antony J.; Clark, David J.; Dean, Anthony J.; Hill, Adam B.; McBride, Vanessa A.; Shaw, Simon E.

    2008-12-01

    We give an overview of ISINA: INTEGRAL Source Identification Network Algorithm. This machine learning algorithm, using Random Forests, is applied to the IBIS/ISGRI dataset in order to ease the production of unbiased future soft gamma-ray source catalogues. The key steps of candidate searching, filtering and feature extraction are described. Three training and testing sets are created in order to deal with the diverse timescales and diverse objects encountered when dealing with the gamma-ray sky. Three independent Random Forest are built: one dealing with faint persistent source recognition, one dealing with strong persistent sources and a final one dealing with transients. For the latter, a new transient detection technique is introduced and described: the Transient Matrix. Finally the performance of the network is assessed and discussed using the testing set and some illustrative source examples.

  19. ISINA: INTEGRAL Source Identification Network Algorithm

    Science.gov (United States)

    Scaringi, S.; Bird, A. J.; Clark, D. J.; Dean, A. J.; Hill, A. B.; McBride, V. A.; Shaw, S. E.

    2008-11-01

    We give an overview of ISINA: INTEGRAL Source Identification Network Algorithm. This machine learning algorithm, using random forests, is applied to the IBIS/ISGRI data set in order to ease the production of unbiased future soft gamma-ray source catalogues. First, we introduce the data set and the problems encountered when dealing with images obtained using the coded mask technique. The initial step of source candidate searching is introduced and an initial candidate list is created. A description of the feature extraction on the initial candidate list is then performed together with feature merging for these candidates. Three training and testing sets are created in order to deal with the diverse time-scales encountered when dealing with the gamma-ray sky. Three independent random forests are built: one dealing with faint persistent source recognition, one dealing with strong persistent sources and a final one dealing with transients. For the latter, a new transient detection technique is introduced and described: the transient matrix. Finally the performance of the network is assessed and discussed using the testing set and some illustrative source examples. Based on observations with INTEGRAL, an ESA project with instruments and science data centre funded by ESA member states (especially the PI countries: Denmark, France, Germany, Italy, Spain), Czech Republic and Poland, and the participation of Russia and the USA. E-mail: simo@astro.soton.ac.uk

  20. The role of integrative taxonomy in the conservation management of cryptic species: the taxonomic status of endangered earless dragons (Agamidae: Tympanocryptis in the grasslands of Queensland, Australia.

    Directory of Open Access Journals (Sweden)

    Jane Melville

    Full Text Available Molecular phylogenetics is increasingly highlighting the prevalence of cryptic species, where morphologically similar organisms have long independent evolutionary histories. When such cryptic species are known to be declining in numbers and are at risk of extinction due to a range of threatening processes, the disjunction between molecular systematics research and conservation policy becomes a significant problem. We investigate the taxonomic status of Tympanocryptis populations in Queensland, which have previously been assigned to T. tetraporophora, using three species delimitation approaches. The taxonomic uncertainties in this species-group are of particular importance in the Darling Downs Earless Dragon (T. cf. tetraporophora, which is ranked as an endangered 'species' of high priority for conservation by the Queensland Department of Environment and Heritage Protection. We undertook a morphological study, integrated with a comprehensive genetic study and species delimitation analyses, to investigate the species status of populations in the region. Phylogenetic analyses of two gene regions (mtDNA: ND2; nuclear: RAG1 revealed high levels of genetic divergence between populations, indicating isolation over long evolutionary time frames, and strongly supporting two independent evolutionary lineages in southeastern Queensland, from the Darling Downs, and a third in the Gulf Region of northern Queensland. Of the three species delimitation protocols used, we found integrative taxonomy the most applicable to this cryptic species complex. Our study demonstrates the utility of integrative taxonomy as a species delimitation approach in cryptic complexes of species with conservation significance, where limited numbers of specimens are available.

  1. The role of integrative taxonomy in the conservation management of cryptic species: the taxonomic status of endangered earless dragons (Agamidae: Tympanocryptis) in the grasslands of Queensland, Australia.

    Science.gov (United States)

    Melville, Jane; Smith, Katie; Hobson, Rod; Hunjan, Sumitha; Shoo, Luke

    2014-01-01

    Molecular phylogenetics is increasingly highlighting the prevalence of cryptic species, where morphologically similar organisms have long independent evolutionary histories. When such cryptic species are known to be declining in numbers and are at risk of extinction due to a range of threatening processes, the disjunction between molecular systematics research and conservation policy becomes a significant problem. We investigate the taxonomic status of Tympanocryptis populations in Queensland, which have previously been assigned to T. tetraporophora, using three species delimitation approaches. The taxonomic uncertainties in this species-group are of particular importance in the Darling Downs Earless Dragon (T. cf. tetraporophora), which is ranked as an endangered 'species' of high priority for conservation by the Queensland Department of Environment and Heritage Protection. We undertook a morphological study, integrated with a comprehensive genetic study and species delimitation analyses, to investigate the species status of populations in the region. Phylogenetic analyses of two gene regions (mtDNA: ND2; nuclear: RAG1) revealed high levels of genetic divergence between populations, indicating isolation over long evolutionary time frames, and strongly supporting two independent evolutionary lineages in southeastern Queensland, from the Darling Downs, and a third in the Gulf Region of northern Queensland. Of the three species delimitation protocols used, we found integrative taxonomy the most applicable to this cryptic species complex. Our study demonstrates the utility of integrative taxonomy as a species delimitation approach in cryptic complexes of species with conservation significance, where limited numbers of specimens are available.

  2. Sources of capabilities, integration and technology commercialization

    DEFF Research Database (Denmark)

    Zahra, Shaker A.; Nielsen, Anders

    2002-01-01

    In recent years, companies have increased their use of internal and external sources in pursuit of a competitive advantage through the effective and timely commercialization of new technology. Grounded in the resource-based view of the firm, this study examines the effect of a company's use...... of internal and external sources on multiple dimensions of successful technology commercialization (TC). The study also explores the moderating role of formal vs. informal integration mechanisms on these relationships. Applying a longitudinal design and data from 119 companies, the results show that internal...

  3. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa.

    Science.gov (United States)

    Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

    2015-01-01

    The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation.

  4. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa

    Science.gov (United States)

    Corbelli, Julian Martin; Zurita, Gustavo Andres; Filloy, Julieta; Galvis, Juan Pablo; Vespa, Natalia Isabel; Bellocq, Isabel

    2015-01-01

    The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD), functional (FBD) and phylogenetic (PBD) facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools) and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants) from two contrasting biomes (subtropical forest and grassland) and land uses (tree plantations and cropfields) in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland), and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation. PMID:25978319

  5. Integrating Taxonomic, Functional and Phylogenetic Beta Diversities: Interactive Effects with the Biome and Land Use across Taxa.

    Directory of Open Access Journals (Sweden)

    Julian Martin Corbelli

    Full Text Available The spatial distribution of species, functional traits and phylogenetic relationships at both the regional and local scales provide complementary approaches to study patterns of biodiversity and help to untangle the mechanisms driving community assembly. Few studies have simultaneously considered the taxonomic (TBD, functional (FBD and phylogenetic (PBD facets of beta diversity. Here we analyze the associations between TBD, FBD, and PBD with the biome (representing different regional species pools and land use, and investigate whether TBD, FBD and PBD were correlated. In the study design we considered two widely used indicator taxa (birds and ants from two contrasting biomes (subtropical forest and grassland and land uses (tree plantations and cropfields in the southern Neotropics. Non-metric multidimensional scaling showed that taxonomic, functional and phylogenetic distances were associated to biome and land use; study sites grouped into four groups on the bi-dimensional space (cropfields in forest and grassland, and tree plantations in forest and grassland, and that was consistent across beta diversity facets and taxa. Mantel and PERMANOVA tests showed that TBD, FBD and PBD were positively correlated for both bird and ant assemblages; in general, partial correlations were also significant. Some of the functional traits considered here were conserved along phylogeny. Our results will contribute to the development of sound land use planning and beta diversity conservation.

  6. Open source integrated modeling environment Delta Shell

    Science.gov (United States)

    Donchyts, G.; Baart, F.; Jagers, B.; van Putten, H.

    2012-04-01

    In the last decade, integrated modelling has become a very popular topic in environmental modelling since it helps solving problems, which is difficult to model using a single model. However, managing complexity of integrated models and minimizing time required for their setup remains a challenging task. The integrated modelling environment Delta Shell simplifies this task. The software components of Delta Shell are easy to reuse separately from each other as well as a part of integrated environment that can run in a command-line or a graphical user interface mode. The most components of the Delta Shell are developed using C# programming language and include libraries used to define, save and visualize various scientific data structures as well as coupled model configurations. Here we present two examples showing how Delta Shell simplifies process of setting up integrated models from the end user and developer perspectives. The first example shows coupling of a rainfall-runoff, a river flow and a run-time control models. The second example shows how coastal morphological database integrates with the coastal morphological model (XBeach) and a custom nourishment designer. Delta Shell is also available as open-source software released under LGPL license and accessible via http://oss.deltares.nl.

  7. A Taxonomic Search Engine: Federating taxonomic databases using web services

    Directory of Open Access Journals (Sweden)

    Page Roderic DM

    2005-03-01

    Full Text Available Abstract Background The taxonomic name of an organism is a key link between different databases that store information on that organism. However, in the absence of a single, comprehensive database of organism names, individual databases lack an easy means of checking the correctness of a name. Furthermore, the same organism may have more than one name, and the same name may apply to more than one organism. Results The Taxonomic Search Engine (TSE is a web application written in PHP that queries multiple taxonomic databases (ITIS, Index Fungorum, IPNI, NCBI, and uBIO and summarises the results in a consistent format. It supports "drill-down" queries to retrieve a specific record. The TSE can optionally suggest alternative spellings the user can try. It also acts as a Life Science Identifier (LSID authority for the source taxonomic databases, providing globally unique identifiers (and associated metadata for each name. Conclusion The Taxonomic Search Engine is available at http://darwin.zoology.gla.ac.uk/~rpage/portal/ and provides a simple demonstration of the potential of the federated approach to providing access to taxonomic names.

  8. A Taxonomic Search Engine: federating taxonomic databases using web services.

    Science.gov (United States)

    Page, Roderic D M

    2005-03-09

    The taxonomic name of an organism is a key link between different databases that store information on that organism. However, in the absence of a single, comprehensive database of organism names, individual databases lack an easy means of checking the correctness of a name. Furthermore, the same organism may have more than one name, and the same name may apply to more than one organism. The Taxonomic Search Engine (TSE) is a web application written in PHP that queries multiple taxonomic databases (ITIS, Index Fungorum, IPNI, NCBI, and uBIO) and summarises the results in a consistent format. It supports "drill-down" queries to retrieve a specific record. The TSE can optionally suggest alternative spellings the user can try. It also acts as a Life Science Identifier (LSID) authority for the source taxonomic databases, providing globally unique identifiers (and associated metadata) for each name. The Taxonomic Search Engine is available at http://darwin.zoology.gla.ac.uk/~rpage/portal/ and provides a simple demonstration of the potential of the federated approach to providing access to taxonomic names.

  9. A Versatile Integrated Ambient Ionization Source Platform

    Science.gov (United States)

    Ai, Wanpeng; Nie, Honggang; Song, Shiyao; Liu, Xiaoyun; Bai, Yu; Liu, Huwei

    2018-04-01

    The pursuit of high-throughput sample analysis from complex matrix demands development of multiple ionization techniques with complementary specialties. A versatile integrated ambient ionization source (iAmIS) platform is proposed in this work, based on the idea of integrating multiple functions, enhancing the efficiency of current ionization techniques, extending the applications, and decreasing the cost of the instrument. The design of the iAmIS platform combines flowing atmospheric pressure afterglow (FAPA) source/direct analysis in real time (DART), dielectric barrier discharge ionization (DBDI)/low-temperature plasma (LTP), desorption electrospray ionization (DESI), and laser desorption (LD) technique. All individual and combined ionization modes can be easily attained by modulating parameters. In particular, the FAPA/DART&DESI mode can realize the detection of polar and nonpolar compounds at the same time with two different ionization mechanisms: proton transfer and charge transfer. The introduction of LD contributes to the mass spectrometry imaging and the surface-assisted laser desorption (SALDI) under ambient condition. Compared with other individual or multi-mode ion source, the iAmIS platform provides the flexibility of choosing different ionization modes, broadens the scope of the analyte detection, and facilitates the analysis of complex samples. [Figure not available: see fulltext.

  10. Open Source GIS based integrated watershed management

    Science.gov (United States)

    Byrne, J. M.; Lindsay, J.; Berg, A. A.

    2013-12-01

    Optimal land and water management to address future and current resource stresses and allocation challenges requires the development of state-of-the-art geomatics and hydrological modelling tools. Future hydrological modelling tools should be of high resolution, process based with real-time capability to assess changing resource issues critical to short, medium and long-term enviromental management. The objective here is to merge two renowned, well published resource modeling programs to create an source toolbox for integrated land and water management applications. This work will facilitate a much increased efficiency in land and water resource security, management and planning. Following an 'open-source' philosophy, the tools will be computer platform independent with source code freely available, maximizing knowledge transfer and the global value of the proposed research. The envisioned set of water resource management tools will be housed within 'Whitebox Geospatial Analysis Tools'. Whitebox, is an open-source geographical information system (GIS) developed by Dr. John Lindsay at the University of Guelph. The emphasis of the Whitebox project has been to develop a user-friendly interface for advanced spatial analysis in environmental applications. The plugin architecture of the software is ideal for the tight-integration of spatially distributed models and spatial analysis algorithms such as those contained within the GENESYS suite. Open-source development extends knowledge and technology transfer to a broad range of end-users and builds Canadian capability to address complex resource management problems with better tools and expertise for managers in Canada and around the world. GENESYS (Generate Earth Systems Science input) is an innovative, efficient, high-resolution hydro- and agro-meteorological model for complex terrain watersheds developed under the direction of Dr. James Byrne. GENESYS is an outstanding research and applications tool to address

  11. Integrated source of broadband quadrature squeezed light

    DEFF Research Database (Denmark)

    Hoff, Ulrich Busk; Nielsen, Bo Melholt; Andersen, Ulrik Lund

    2015-01-01

    An integrated silicon nitride resonator is proposed as an ultracompact source of bright single-mode quadrature squeezed light at 850 nm. Optical properties of the device are investigated and tailored through numerical simulations, with particular attention paid to loss associated with interfacing...... the device. An asymmetric double layer stack waveguide geometry with inverse vertical tapers is proposed for efficient and robust fibre-chip coupling, yielding a simulated total loss of -0.75 dB/facet. We assess the feasibility of the device through a full quantum noise analysis and derive the output...

  12. PESI - a taxonomic backbone for Europe

    Science.gov (United States)

    Kouwenberg, Juliana; Boumans, Louis; Hussey, Charles; Hyam, Roger; Nicolson, Nicola; Kirk, Paul; Paton, Alan; Michel, Ellinor; Guiry, Michael D.; Boegh, Phillip S.; Pedersen, Henrik Ærenlund; Enghoff, Henrik; von Raab-Straube, Eckhard; Güntsch, Anton; Geoffroy, Marc; Müller, Andreas; Kohlbecker, Andreas; Berendsohn, Walter; Appeltans, Ward; Arvanitidis, Christos; Vanhoorne, Bart; Declerck, Joram; Vandepitte, Leen; Hernandez, Francisco; Nash, Róisín; Costello, Mark John; Ouvrard, David; Bezard-Falgas, Pascale; Bourgoin, Thierry; Wetzel, Florian Tobias; Glöckler, Falko; Korb, Günther; Ring, Caroline; Hagedorn, Gregor; Häuser, Christoph; Aktaç, Nihat; Asan, Ahmet; Ardelean, Adorian; Borges, Paulo Alexandre Vieira; Dhora, Dhimiter; Khachatryan, Hasmik; Malicky, Michael; Ibrahimov, Shaig; Tuzikov, Alexander; De Wever, Aaike; Moncheva, Snejana; Spassov, Nikolai; Chobot, Karel; Popov, Alexi; Boršić, Igor; Sfenthourakis, Spyros; Kõljalg, Urmas; Uotila, Pertti; Olivier, Gargominy; Dauvin, Jean-Claude; Tarkhnishvili, David; Chaladze, Giorgi; Tuerkay, Michael; Legakis, Anastasios; Peregovits, László; Gudmundsson, Gudmundur; Ólafsson, Erling; Lysaght, Liam; Galil, Bella Sarah; Raimondo, Francesco M.; Domina, Gianniantonio; Stoch, Fabio; Minelli, Alessandro; Spungis, Voldermars; Budrys, Eduardas; Olenin, Sergej; Turpel, Armand; Walisch, Tania; Krpach, Vladimir; Gambin, Marie Therese; Ungureanu, Laurentia; Karaman, Gordan; Kleukers, Roy M.J.C.; Stur, Elisabeth; Aagaard, Kaare; Valland, Nils; Moen, Toril Loennechen; Bogdanowicz, Wieslaw; Tykarski, Piotr; Węsławski, Jan Marcin; Kędra, Monika; M. de Frias Martins, Antonio; Abreu, António Domingos; Silva, Ricardo; Medvedev, Sergei; Ryss, Alexander; Šimić, Smiljka; Marhold, Karol; Stloukal, Eduard; Tome, Davorin; Ramos, Marian A.; Valdés, Benito; Pina, Francisco; Kullander, Sven; Telenius, Anders; Gonseth, Yves; Tschudin, Pascal; Sergeyeva, Oleksandra; Vladymyrov, Volodymyr; Rizun, Volodymyr Bohdanovych; Raper, Chris; Lear, Dan; Stoev, Pavel; Penev, Lyubomir; Rubio, Ana Casino; Backeljau, Thierry; Saarenmaa, Hannu; Ulenberg, Sandrine

    2015-01-01

    Abstract Background Reliable taxonomy underpins communication in all of biology, not least nature conservation and sustainable use of ecosystem resources. The flexibility of taxonomic interpretations, however, presents a serious challenge for end-users of taxonomic concepts. Users need standardised and continuously harmonised taxonomic reference systems, as well as high-quality and complete taxonomic data sets, but these are generally lacking for non-specialists. The solution is in dynamic, expertly curated web-based taxonomic tools. The Pan-European Species-directories Infrastructure (PESI) worked to solve this key issue by providing a taxonomic e-infrastructure for Europe. It strengthened the relevant social (expertise) and information (standards, data and technical) capacities of five major community networks on taxonomic indexing in Europe, which is essential for proper biodiversity assessment and monitoring activities. The key objectives of PESI were: 1) standardisation in taxonomic reference systems, 2) enhancement of the quality and completeness of taxonomic data sets and 3) creation of integrated access to taxonomic information. New information This paper describes the results of PESI and its future prospects, including the involvement in major European biodiversity informatics initiatives and programs. PMID:26491393

  13. An integrative taxonomic review of the agamid genus Bronchocela (Kuhl, 1820) from Peninsular Malaysia with descriptions of new montane and insular endemics.

    Science.gov (United States)

    Grismer, L Lee; Wood, P L; Lee, Cheol Haeng; Quah, Evan S H; Anuar, Shahrul; Ngadi, Ehwan; Sites, Jack W

    2015-04-20

    An integrative taxonomic analysis is used to identify and describe two new species of the agamid genus Bronchocela (Kuhl) from Peninsular Malaysia: an upland species B. shenlong sp. nov. from Bukit Larut, Perak in the Bintang Mountain Range and Parit Falls, Cameron Highlands, Pahang in the Titiwangsa Mountain Range and an insular species, B. rayaensis sp. nov., from Pulau Langkawi, Kedah off the northwest coast on the border with Thailand. Both species are diagnosed from each other and all other species of Bronchocela on the basis of body shape, scale morphology, and color pattern. The analysis also demonstrates the remarkable genetic similarity of B. cristatella (Kuhl) throughout 1120 km of its range from northern Peninsular Malaysia to western Borneo despite its highly variable coloration and pattern. The two new species are appended to a rapidly growing list of newly described lizard species (60 to date) from Peninsular Malaysia tallied within the last decade.

  14. Asteroid taxonomic classifications

    International Nuclear Information System (INIS)

    Tholen, D.J.

    1989-01-01

    This paper reports on three taxonomic classification schemes developed and applied to the body of available color and albedo data. Asteroid taxonomic classifications according to two of these schemes are reproduced

  15. 19 CFR 10.532 - Integrated Sourcing Initiative.

    Science.gov (United States)

    2010-04-01

    ... 19 Customs Duties 1 2010-04-01 2010-04-01 false Integrated Sourcing Initiative. 10.532 Section 10... Trade Agreement Rules of Origin § 10.532 Integrated Sourcing Initiative. (a) For purposes of General... Sourcing Initiative if: (1) The good, in its condition as imported, is both classified in a tariff...

  16. Revision of the genus Cuvierina Boas, 1886 based on integrative taxonomic data, including the description of a new species from the Pacific Ocean (Gastropoda, Thecosomata).

    Science.gov (United States)

    Burridge, Alice K; Janssen, Arie W; Peijnenburg, Katja T C A

    2016-01-01

    Shelled pteropods (Gastropoda, Thecosomata, Euthecosomata) are a group of holoplanktonic gastropods that occur predominantly in the surface layers of the world's oceans. Accurate species identifications are essential for tracking changes in species assemblages of planktonic gastropods, because different species are expected to have different sensitivities to ocean changes. The genus Cuvierina has a worldwide warm water distribution pattern between ~36°N and ~39°S. Based on an integrative taxonomic approach combining morphometric, genetic, and biogeographic information, the two subgenera of Cuvierina , Cuvierina s. str. and Urceolarica , are rejected. A new species is introduced: Cuvierina tsudai sp. n. , which has to date been considered the same species as Cuvierina pacifica . Cuvierina tsudai sp. n. is endemic to the Pacific Ocean and is characterised by a shell height of 7.2-8.0 mm, a moderately cylindrical shell shape, the absence of micro-ornamentation and a triangular aperture. Cuvierina pacifica is restricted to the centre of the oligotrophic southern Pacific gyre, has a shell height of 6.6-8.5 mm, a more cylindrical shell shape, no micro-ornamentation and a less triangular aperture than Cuvierina tsudai sp. n.

  17. An integrative taxonomic study of Pavanelliella spp. (Monogenoidea, Dactylogyridae) with the description of a new species from the nasal cavities of an Amazon pimelodid catfish.

    Science.gov (United States)

    Aguiar, Julio C; Maia, Antônio A M; Silva, Marcia R M; Ceccarelli, Paulo S; Domingues, Marcus V; Adriano, Edson A

    2017-12-01

    The present study is an integrative taxonomic analysis of Pavanelliella spp. (Monogenoidea, Dactylogyridae), and describes a new species from the nasal cavities of the Amazonian pimelodid catfish Brachyplatystoma rousseauxii (Siluriformes Pimelodidae) from the Tapajós River (Amazon Basin, Pará state, Brazil). Pavanelliella jarii sp. n. is characterized by the presence of 3-4 rings in the male copulatory organ, the absence of rings around the vaginal atrium and by its sinuous vaginal canal, which sometimes forms 0.5-1 rings in the distal portion. The sequencing of the small subunit ribosomal DNA (ssrDNA) and internal transcribed spacer 1 (ITS-1) of three species of Pavanelliella, Vancleaveus cicinnus, and an undetermined dactylogyrid allowed the phylogenetic reconstruction of these dactylogyrids. The analysis indicated that P. jarii sp. n. is closely related to Pavanelliella takemotoi and Pavanelliella pavanellii, which formed a sister clade to ancylodiscoidines parasites of siluriform fish from the Oriental and Afrotropical regions. The analysis also corroborated the non-monophyly of Ancyrocephalinae, revealing that ancylodiscoidines arose between ancyrocephalines lineages, in a sister relationship to pseudodactylogyrines+marine ancyrocephalines+ancyrocephalines parasites of afrotropical perciforms+dactylogyrines. Cladistical analysis indicates that the haptoral anchor/bar complex has been lost several times in the evolutionary history of Dactylogyridae. The analysis also indicated that Dactylogyrus is polyphyletic, as Acolpenteron ureteroecetes and Dactylogyroides longicirrus arose between the three lineages formed by Dactylogyrus spp. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Integrating multiple data sources for malware classification

    Science.gov (United States)

    Anderson, Blake Harrell; Storlie, Curtis B; Lane, Terran

    2015-04-28

    Disclosed herein are representative embodiments of tools and techniques for classifying programs. According to one exemplary technique, at least one graph representation of at least one dynamic data source of at least one program is generated. Also, at least one graph representation of at least one static data source of the at least one program is generated. Additionally, at least using the at least one graph representation of the at least one dynamic data source and the at least one graph representation of the at least one static data source, the at least one program is classified.

  19. Hacia una Taxonomía Integral: poniendo a prueba especies candidatas relacionadas a Liolaemus buergeri Werner 1907 (Iguania: Liolaemini mediante análisis morfológicos

    Directory of Open Access Journals (Sweden)

    Avila, Luciano Javier

    2012-11-01

    Full Text Available La taxonomía tradicional ha estado basada en caracteres de morfología externa o interna, delimitando morfo-especies. En los últimos años comenzó a desarrollarse la denominada taxonomía integral, con el objetivo de integrar los conceptos y métodos básicos de la taxonomía tradicional con nuevos conceptos y metodologías. Dentro de esta aproximación las especies son hipótesis, y las hipótesis de especies más estables, son aquellas avaladas por diferentes tipos de caracteres independientes. Liolaemus es el género de lagartijas con más número de especies de América austral, y dentro del mismo se han propuesto varios clados y complejos. Uno de ellos es el grupo kriegi, que incluye las especies L. buergeri, L. ceii y L. kriegi. En base a tres marcadores mitocondriales, se han propuesto como especies candidatas a tres taxa cercanamente relacionados a L. buergeri: L. sp. A, L. sp. B y L. sp. C. El objetivo de este trabajo es analizar las variaciones morfológicas entre los taxa propuestos y los individuos de la localidad tipo de L. buergeri, a fin de aportar una fuente de evidencia nueva e independiente al análisis de las hipótesis de especies propuestas para este grupo. Se estudiaron individuos de toda el área de distribución de L. buergeri y de las especies candidatas. Para cada ejemplar se registraron caracteres morfométricos, de escamación y el número de poros precloacales en machos. Se encontraron diferencias significativas entre los taxa para las variables analizadas, y se hallaron diferencias en el grado de dimorfismo sexual. Los resultados de estos análisis indican que los taxa candidatos se pueden diferenciar morfológicamente y por lo tanto apoyan, de manera independiente, las hipótesis de especies planteadas por el análisis de DNA mitocondrial. Traditional taxonomy has usually been based mainly on characters of external or internal morphology to delimit morpho-species. Recent years have seen the emergence of

  20. Integration Of Data From Heterogeneous Sources Using Etl Technology.

    Directory of Open Access Journals (Sweden)

    Marek Macura

    2014-01-01

    Full Text Available Data integration is a crucial issue in environments of heterogeneous data sources. At present mentioned heterogeneity is becoming widespread. Whenever, based on various data sources, we want to gain useful information and knowledge we must solve data integration problem in order to apply appropriate analytical methods on comprehensive and uniform data. Such activity is known as knowledge discovery from data process. Therefore approaches to data integration problem are very interesting and bring us closer to the "age of information". The paper presents an architecture, which implements knowledge discovery from data process. The solution combines ETL technology and wrapper layer known from mediated systems. It also provides semantic integration through connections mechanism between data elements. The solution allows for integration of any data sources and implementation of analytical methods in one environment. The proposed environment is verified by applying it to data sources on the foundry industry.

  1. Tau method approximation of the Hubbell rectangular source integral

    International Nuclear Information System (INIS)

    Kalla, S.L.; Khajah, H.G.

    2000-01-01

    The Tau method is applied to obtain expansions, in terms of Chebyshev polynomials, which approximate the Hubbell rectangular source integral:I(a,b)=∫ b 0 (1/(√(1+x 2 )) arctan(a/(√(1+x 2 )))) This integral corresponds to the response of an omni-directional radiation detector situated over a corner of a plane isotropic rectangular source. A discussion of the error in the Tau method approximation follows

  2. Integrated Photovoltaic System Used as an Alternative Power Source

    Directory of Open Access Journals (Sweden)

    Ionel Laurentiu Alboteanu

    2014-09-01

    Full Text Available This paper presents a solution to use solar energy as an alternative source of electricity to conventional sources. The solution is to use a compact photovoltaic system integrated into a micro smart grid. The studied photovoltaic system is used into concrete application for the power supply lighting in a didactic laboratory.

  3. Integrating an Automatic Judge into an Open Source LMS

    Science.gov (United States)

    Georgouli, Katerina; Guerreiro, Pedro

    2011-01-01

    This paper presents the successful integration of the evaluation engine of Mooshak into the open source learning management system Claroline. Mooshak is an open source online automatic judge that has been used for international and national programming competitions. although it was originally designed for programming competitions, Mooshak has also…

  4. Controlling the taxonomic variable: Taxonomic concept resolution for a southeastern United States herbarium portal

    Directory of Open Access Journals (Sweden)

    Nico Franz

    2016-09-01

    Full Text Available Overview. Taxonomic names are imperfect identifiers of specific and sometimes conflicting taxonomic perspectives in aggregated biodiversity data environments. The inherent ambiguities of names can be mitigated using syntactic and semantic conventions developed under the taxonomic concept approach. These include: (1 representation of taxonomic concept labels (TCLs: name sec. source to precisely identify name usages and meanings, (2 use of parent/child relationships to assemble separate taxonomic perspectives, and (3 expert provision of Region Connection Calculus articulations (RCC–5: congruence, [inverse] inclusion, overlap, exclusion that specify how data identified to different-sourced TCLs can be integrated. Application of these conventions greatly increases trust in biodiversity data networks, most of which promote unitary taxonomic 'syntheses' that obscure the actual diversity of expert-held views. Better design solutions allow users to control the taxonomic variable and thereby assess the robustness of their biological inferences under different perspectives. A unique constellation of prior efforts – including the powerful Symbiota collections software platform, the Euler/X multi-taxonomy alignment toolkit, and the "Weakley Flora" which entails 7,000 concepts and more than 75,000 RCC–5 articulations – provides the opportunity to build a first full-scale concept resolution service for SERNEC, the SouthEast Regional Network of Expertise and Collections, currently with 60 member herbaria and 2 million occurrence records. Intellectual merit. We have developed a multi-dimensional, step-wise plan to transition SERNEC's data culture from name- to concept-based practices. (1 We will engage SERNEC experts through annual, regional workshops and follow-up interactions that will foster buy-in and ultimately the completion of 12 community-identified use cases. (2. We will leverage RCC–5 data from the Weakley Flora and further development of

  5. Converting Taxonomic Descriptions to New Digital Formats

    Directory of Open Access Journals (Sweden)

    Hong Cui

    2008-01-01

    Full Text Available Abstract.--The majority of taxonomic descriptions is currently in print format. The majority of digital descriptions are in formats such as DOC, HTML, or PDF and for human readers. These formats do not convey rich semantics in taxonomic descriptions for computer-aided process. Newer digital formats such as XML and RDF accommodate semantic annotations that allow computers to process the rich semantics on human's behalf, thus open up opportunities for a wide range of innovative usages of taxonomic descriptions, such as searching in more precise and flexible ways, integrating with gnomic and geographic information, generating taxonomic keys automatically, and text data mining and information visualization etc. This paper discusses the challenges in automated conversion of multiple collections of descriptions to XML format and reports an automated system, MARTT. MARTT is a machine-learning system that makes use of training examples to tag new descriptions into XML format. A number of utilities are implemented as solutions to the challenges. The utilities are used to reduce the effort for training example preparation, to facilitate the creation of a comprehensive schema, and to predict system performance on a new collection of descriptions. The system has been tested with several plant and alga taxonomic publications including Flora of China and Flora of North America.

  6. Dual-Source Swept-Source Optical Coherence Tomography Reconstructed on Integrated Spectrum

    Directory of Open Access Journals (Sweden)

    Shoude Chang

    2012-01-01

    Full Text Available Dual-source swept-source optical coherence tomography (DS-SSOCT has two individual sources with different central wavelengths, linewidth, and bandwidths. Because of the difference between the two sources, the individually reconstructed tomograms from each source have different aspect ratio, which makes the comparison and integration difficult. We report a method to merge two sets of DS-SSOCT raw data in a common spectrum, on which both data have the same spectrum density and a correct separation. The reconstructed tomographic image can seamlessly integrate the two bands of OCT data together. The final image has higher axial resolution and richer spectroscopic information than any of the individually reconstructed tomography image.

  7. Building integrated business environments: analysing open-source ESB

    Science.gov (United States)

    Martínez-Carreras, M. A.; García Jimenez, F. J.; Gómez Skarmeta, A. F.

    2015-05-01

    Integration and interoperability are two concepts that have gained significant prominence in the business field, providing tools which enable enterprise application integration (EAI). In this sense, enterprise service bus (ESB) has played a crucial role as the underpinning technology for creating integrated environments in which companies may connect all their legacy-applications. However, the potential of these technologies remains unknown and some important features are not used to develop suitable business environments. The aim of this paper is to describe and detail the elements for building the next generation of integrated business environments (IBE) and to analyse the features of ESBs as the core of this infrastructure. For this purpose, we evaluate how well-known open-source ESB products fulfil these needs. Moreover, we introduce a scenario in which the collaborative system 'Alfresco' is integrated in the business infrastructure. Finally, we provide a comparison of the different open-source ESBs available for IBE requirements. According to this study, Fuse ESB provides the best results, considering features such as support for a wide variety of standards and specifications, documentation and implementation, security, advanced business trends, ease of integration and performance.

  8. Computation of rectangular source integral by rational parameter polynomial method

    International Nuclear Information System (INIS)

    Prabha, Hem

    2001-01-01

    Hubbell et al. (J. Res. Nat Bureau Standards 64C, (1960) 121) have obtained a series expansion for the calculation of the radiation field generated by a plane isotropic rectangular source (plaque), in which leading term is the integral H(a,b). In this paper another integral I(a,b), which is related with the integral H(a,b) has been solved by the rational parameter polynomial method. From I(a,b), we compute H(a,b). Using this method the integral I(a,b) is expressed in the form of a polynomial of a rational parameter. Generally, a function f (x) is expressed in terms of x. In this method this is expressed in terms of x/(1+x). In this way, the accuracy of the expression is good over a wide range of x as compared to the earlier approach. The results for I(a,b) and H(a,b) are given for a sixth degree polynomial and are found to be in good agreement with the results obtained by numerically integrating the integral. Accuracy could be increased either by increasing the degree of the polynomial or by dividing the range of integration. The results of H(a,b) and I(a,b) are given for values of b and a up to 2.0 and 20.0, respectively

  9. Economic dispatch optimization for system integrating renewable energy sources

    Science.gov (United States)

    Jihane, Kartite; Mohamed, Cherkaoui

    2018-05-01

    Nowadays, the use of energy is growing especially in transportation and electricity industries. However this energy is based on conventional sources which pollute the environment. Multi-source system is seen as the best solution to sustainable development. This paper proposes the Economic Dispatch (ED) of hybrid renewable power system. The hybrid system is composed of ten thermal generators, photovoltaic (PV) generator and wind turbine generator. To show the importance of renewable energy sources (RES) in the energy mix we have ran the simulation for system integrated PV only and PV plus wind. The result shows that the system with renewable energy sources (RES) is more compromising than the system without RES in terms of fuel cost.

  10. Integrating Philips' extreme UV source in the alpha-tools

    Science.gov (United States)

    Pankert, Joseph; Apetz, Rolf; Bergmann, Klaus; Derra, Guenther; Janssen, Maurice; Jonkers, Jeroen; Klein, Jurgen; Kruecken, Thomas; List, Andreas; Loeken, Michael; Metzmacher, Christof; Neff, Willi; Probst, Sven; Prummer, Ralph; Rosier, Oliver; Seiwert, Stefan; Siemons, Guido; Vaudrevange, Dominik; Wagemann, Dirk; Weber, Achim; Zink, Peter; Zitzen, Oliver

    2005-05-01

    The paper describes recent progress in the development of the Philips's EUV source. Progress has been realized at many frontiers: Integration studies of the source into a scanner have primarily been studied on the Xe source because it has a high degree of maturity. We report on integration with a collector, associated collector lifetime and optical characteristics. Collector lifetime in excess of 1 bln shots could be demonstrated. Next, an active dose control system was developed and tested on the Xe lamp. Resulting dose stability data are less than 0.2% for an exposure window of 100 pulses. The second part of the paper reports on progress in the development of the Philips' Sn source. First, the details of the concept are described. It is based on a Laser triggered vacuum arc, which is an extension with respect to previous designs. The source is furbished with rotating electrodes that are covered with a Sn film that is constantly regenerated. Hence by the very design of the source, it is scalable to very high power levels, and moreover has fundamentally solved the notorious problem of electrode erosion. Power values of 260 W in 2p sr are reported, along with a stable, long life operation of the lamp. The paper also addresses the problem of debris generation and mitigation of the Sn-source. The problem is attacked by a combined strategy of protection of the collector by traditional means (e.g. fields, foiltraps... ), and by designing the gas atmosphere according to the principles of the well known halogen cycles in incandescent lamps. These principles have been studied in the Lighting industry for decades and rely on the excessively high vapor pressures of metal halides. Transferred to the Sn source, it allows pumping away tin residues that would otherwise irreversibly deposit on the collector.

  11. Temperature Characteristics of Monolithically Integrated Wavelength-Selectable Light Sources

    International Nuclear Information System (INIS)

    Han Liang-Shun; Zhu Hong-Liang; Zhang Can; Ma Li; Liang Song; Wang Wei

    2013-01-01

    The temperature characteristics of monolithically integrated wavelength-selectable light sources are experimentally investigated. The wavelength-selectable light sources consist of four distributed feedback (DFB) lasers, a multimode interferometer coupler, and a semiconductor optical amplifier. The oscillating wavelength of the DFB laser could be modulated by adjusting the device operating temperature. A wavelength range covering over 8.0nm is obtained with stable single-mode operation by selecting the appropriate laser and chip temperature. The thermal crosstalk caused by the lateral heat spreading between lasers operating simultaneously is evaluated by oscillating-wavelength shift. The thermal crosstalk approximately decreases exponentially as the increasing distance between lasers

  12. Evaluated Rayleigh integrals for pulsed planar expanding ring sources

    International Nuclear Information System (INIS)

    Warshaw, S.I.

    1985-01-01

    Time-domain analytic and semianalytic pressure fields acoustically radiated from expanding pulsed ring sources imbedded in a planar rigid baffle have been calculated. The source functions are radially symmetric delta-function distributions whose amplitude and argument have simple functional dependencies on radius and time. Certain cases yield closed analytic results, while others result in elliptic integrals, which are evaluated to high accuracy by Gauss-Chebyshev and modified Gauss-Legendre quadrature. These results are of value for calibrating computer simulations and convolution procedures, and estimating fields from more complex planar radiators. 3 refs., 4 figs

  13. Neuronal integration of dynamic sources: Bayesian learning and Bayesian inference.

    Science.gov (United States)

    Siegelmann, Hava T; Holzman, Lars E

    2010-09-01

    One of the brain's most basic functions is integrating sensory data from diverse sources. This ability causes us to question whether the neural system is computationally capable of intelligently integrating data, not only when sources have known, fixed relative dependencies but also when it must determine such relative weightings based on dynamic conditions, and then use these learned weightings to accurately infer information about the world. We suggest that the brain is, in fact, fully capable of computing this parallel task in a single network and describe a neural inspired circuit with this property. Our implementation suggests the possibility that evidence learning requires a more complex organization of the network than was previously assumed, where neurons have different specialties, whose emergence brings the desired adaptivity seen in human online inference.

  14. How to Integrate Variable Power Source into a Power Grid

    Science.gov (United States)

    Asano, Hiroshi

    This paper discusses how to integrate variable power source such as wind power and photovoltaic generation into a power grid. The intermittent renewable generation is expected to penetrate for less carbon intensive power supply system, but it causes voltage control problem in the distribution system, and supply-demand imbalance problem in a whole power system. Cooperative control of customers' energy storage equipment such as water heater with storage tank for reducing inverse power flow from the roof-top PV system, the operation technique using a battery system and the solar radiation forecast for stabilizing output of variable generation, smart charging of plug-in hybrid electric vehicles for load frequency control (LFC), and other methods to integrate variable power source with improving social benefits are surveyed.

  15. Evaluation of integrity of radiation sources of nuclear gauges

    International Nuclear Information System (INIS)

    Torohate, Wiclif Francisco

    2016-01-01

    Nuclear equipment meters are mainly used in the industry in quality control and process control. The principle of operation consists in a shielded radioactive source together with a radiation detector such that the radiation interacts with the material to be analyzed before reaching the detector, providing real time data. Can be as their fixed and mobile mobility, the unique properties of ionizing radiation are used in three basic modes, transmission, backscatter or dispersion or induced (reactive). With the advancement and technological modernization in the world, the demand for nuclear gauges becomes increasingly larger. Currently in Brazil there are about 465 process control plants and 21 portable systems and Mozambique about 45 facilities using nuclear gauges. This font registration is done through a process called source inventory that allows also to know the category of the source, the danger or risk to human health that the source offers. The handling of this equipment requires personnel, certified, skilled and well trained in radiation protection area in accordance with the requirements of the various CNEN Rules. Due to the presence of radioactive source and because these devices are used by workers risk because there external radiation. In this context, we made the smear test in two fixed meters from the IRD industry laboratory, which determines the integrity of the source package, mandatory item in periodic integrity testing of the radiation source of this type of device. A set of procedures is made for its implementation as an evaluation of the radiological risk by radiological survey. It was intended to contribute to the learning handling and safe use of these meters. (author)

  16. Integrating Free and Open Source Solutions into Geospatial Science Education

    Directory of Open Access Journals (Sweden)

    Vaclav Petras

    2015-06-01

    Full Text Available While free and open source software becomes increasingly important in geospatial research and industry, open science perspectives are generally less reflected in universities’ educational programs. We present an example of how free and open source software can be incorporated into geospatial education to promote open and reproducible science. Since 2008 graduate students at North Carolina State University have the opportunity to take a course on geospatial modeling and analysis that is taught with both proprietary and free and open source software. In this course, students perform geospatial tasks simultaneously in the proprietary package ArcGIS and the free and open source package GRASS GIS. By ensuring that students learn to distinguish between geospatial concepts and software specifics, students become more flexible and stronger spatial thinkers when choosing solutions for their independent work in the future. We also discuss ways to continually update and improve our publicly available teaching materials for reuse by teachers, self-learners and other members of the GIS community. Only when free and open source software is fully integrated into geospatial education, we will be able to encourage a culture of openness and, thus, enable greater reproducibility in research and development applications.

  17. Effect of source integration on the geochemical fluxes from springs

    International Nuclear Information System (INIS)

    Frisbee, Marty D.; Phillips, Fred M.; White, Art F.; Campbell, Andrew R.; Liu, Fengjing

    2013-01-01

    Geochemical fluxes from watersheds are typically defined using mass-balance methods that essentially lump all weathering processes operative in a watershed into a single flux of solute mass measured in streamflow at the watershed outlet. However, it is important that we understand how weathering processes in different hydrological zones of a watershed (i.e., surface, unsaturated, and saturated zones) contribute to the total geochemical flux from the watershed. This capability will improve understanding of how geochemical fluxes from these different zones may change in response to climate change. Here, the geochemical flux from weathering processes occurring solely in the saturated zone is investigated. This task, however, remains exceedingly difficult due to the sparsity of subsurface sampling points, especially in large, remote, and/or undeveloped watersheds. In such cases, springflow is often assumed to be a proxy for groundwater (defined as water residing in fully saturated geologic formations). However, springflow generation may integrate different sources of water including, but not limited to, groundwater. The authors’ hypothesis is that long-term estimates of geochemical fluxes from groundwater using springflow proxies will be too large due to the integrative nature of springflow generation. Two conceptual models of springflow generation are tested using endmember mixing analyses (EMMA) on observations of spring chemistries and stable isotopic compositions in a large alpine watershed in the San Juan Mountains of southwestern Colorado. In the “total springflow” conceptual model, springflow is assumed to be 100% groundwater. In the “fractional springflow” conceptual model, springflow is assumed to be an integration of different sources of water (e.g., groundwater, unsaturated flow, preferential flow in the soil, etc.) and groundwater is only a fractional component. The results indicate that groundwater contributions in springflow range from 2% to 100

  18. Building a Taxonomic Data Editor: ITIS Taxonomic Workbench 6.0

    OpenAIRE

    Mitchell,David; Bowman,Lisa; Brockmeier,Christopher

    2017-01-01

    The Integrated Taxonomic Information System (ITIS - www.itis.gov) provides a regularly updated global database that currently contains over 840,000 scientific names and their hierarchy. A new rich Internet application for adding and editing ITIS data, Taxonomic Workbench 6.0, is being developed using the AngularJS framework. AngularJS is designed to take advantage of many features that are fairly recent to the web platform, facilitates a well-structured product that is easier to maintain, and...

  19. Source-Based Tasks in Writing Independent and Integrated Essays

    Directory of Open Access Journals (Sweden)

    Javad Gholami

    2017-07-01

    Full Text Available Integrated writing tasks have gained considerable attention in ESL and EFL writing assessment and are frequently needed and used in academic settings and daily life. However, they are very rarely practiced and promoted in writing classes. This paper explored the effects of source-based writing practice on EFL learners’ composing abilities and investigated the probable differences between those tasks and independent writing ones in improving Iranian EFL learners’ essay writing abilities. To this end, a quasi-experimental design was implemented to gauge EFL learners’ writing improvements using a pretest-posttest layout. Twenty female learners taking a TOEFL iBT preparation course were randomly divided into an only-writing group with just independent writing instruction and essay practice, and a hybrid-writing-approach group receiving instruction and practice on independent writing plus source-based essay writing for ten sessions. Based on the findings, the participants with hybrid writing practice outperformed their counterparts in integrated essay tests. Their superior performance was not observed in the case of traditional independent writing tasks. The present study calls for incorporating more source-based writing tasks in writing courses.

  20. International Requirements for Large Integration of Renewable Energy Sources

    DEFF Research Database (Denmark)

    Molina-Garcia, Angel; Hansen, Anca Daniela; Muljadi, Ed

    2017-01-01

    Most European countries have concerns about the integration of large amounts of renewable energy sources (RES) into electric power systems, and this is currently a topic of growing interest. In January 2008, the European Commission published the 2020 package, which proposes committing the European...... Union to a 20% reduction in greenhouse gas emissions, to achieve a target of deriving 20% of the European Union's final energy consumption from renewable sources, and to achieve 20% improvement in energy efficiency both by the year 2020 [1]. Member states have different individual goals to meet...... these overall objectives, and they each need to provide a detailed roadmap describing how they will meet these legally binding targets [2]. At this time, RES are an indispensable part of the global energy mix, which has been partially motivated by the continuous increases in hydropower as well as the rapid...

  1. Carbon Sources for Polyhydroxyalkanoates and an Integrated Biorefinery

    Directory of Open Access Journals (Sweden)

    Guozhan Jiang

    2016-07-01

    Full Text Available Polyhydroxyalkanoates (PHAs are a group of bioplastics that have a wide range of applications. Extensive progress has been made in our understanding of PHAs’ biosynthesis, and currently, it is possible to engineer bacterial strains to produce PHAs with desired properties. The substrates for the fermentative production of PHAs are primarily derived from food-based carbon sources, raising concerns over the sustainability of their production in terms of their impact on food prices. This paper gives an overview of the current carbon sources used for PHA production and the methods used to transform these sources into fermentable forms. This allows us to identify the opportunities and restraints linked to future sustainable PHA production. Hemicellulose hydrolysates and crude glycerol are identified as two promising carbon sources for a sustainable production of PHAs. Hemicellulose hydrolysates and crude glycerol can be produced on a large scale during various second generation biofuels’ production. An integration of PHA production within a modern biorefinery is therefore proposed to produce biofuels and bioplastics simultaneously. This will create the potential to offset the production cost of biofuels and reduce the overall production cost of PHAs.

  2. Carbon Sources for Polyhydroxyalkanoates and an Integrated Biorefinery.

    Science.gov (United States)

    Jiang, Guozhan; Hill, David J; Kowalczuk, Marek; Johnston, Brian; Adamus, Grazyna; Irorere, Victor; Radecka, Iza

    2016-07-19

    Polyhydroxyalkanoates (PHAs) are a group of bioplastics that have a wide range of applications. Extensive progress has been made in our understanding of PHAs' biosynthesis, and currently, it is possible to engineer bacterial strains to produce PHAs with desired properties. The substrates for the fermentative production of PHAs are primarily derived from food-based carbon sources, raising concerns over the sustainability of their production in terms of their impact on food prices. This paper gives an overview of the current carbon sources used for PHA production and the methods used to transform these sources into fermentable forms. This allows us to identify the opportunities and restraints linked to future sustainable PHA production. Hemicellulose hydrolysates and crude glycerol are identified as two promising carbon sources for a sustainable production of PHAs. Hemicellulose hydrolysates and crude glycerol can be produced on a large scale during various second generation biofuels' production. An integration of PHA production within a modern biorefinery is therefore proposed to produce biofuels and bioplastics simultaneously. This will create the potential to offset the production cost of biofuels and reduce the overall production cost of PHAs.

  3. IDENTIFICATIONS OF FIVE INTEGRAL SOURCES VIA OPTICAL SPECTROSCOPY

    International Nuclear Information System (INIS)

    Butler, Suzanne C.; Tomsick, John A.; Chaty, Sylvain; Heras, Juan A. Zurita; Rodriguez, Jerome; Walter, Roland; Kaaret, Philip; Kalemci, Emrah; Oezbey, Mehtap

    2009-01-01

    The International Gamma-Ray Astrophysics Laboratory (INTEGRAL) is discovering hundreds of new hard X-ray sources, many of which remain unidentified. We report on optical spectroscopy of five such sources for which X-ray observations at lower energies (∼0.5-10 keV) and higher angular resolutions than INTEGRAL have allowed for unique optical counterparts to be located. We find that INTEGRAL Gamma-Ray (IGR) J16426+6536 and IGR J22292+6647 are Type 1 Seyfert active galactic nuclei (with IGR J16426+6536 further classified as a Seyfert 1.5) which have redshifts of z = 0.323 and z = 0.113, respectively. IGR J18308-1232 is identified as a cataclysmic variable (CV), and we confirm a previous identification of IGR J19267+1325 as a magnetic CV. IGR J18214-1318 is identified as an obscured high-mass X-ray binary (HMXB), which are systems thought to have a compact object embedded in the stellar wind of a massive star. We combine Chandra fluxes with distances based on the optical observations to calculate X-ray luminosities of the HMXB and CVs, finding L 0.3-10keV = 5 x 10 36 erg s -1 for IGR J18214-1318, L 0.3-10keV = 1.3 x 10 32 erg s -1 for IGR J18308-1232, and L 0.3-10keV = 6.7 x 10 32 erg s -1 for IGR J19267+1325.

  4. FANTOM: Functional and taxonomic analysis of metagenomes

    Directory of Open Access Journals (Sweden)

    Sanli Kemal

    2013-02-01

    Full Text Available Abstract Background Interpretation of quantitative metagenomics data is important for our understanding of ecosystem functioning and assessing differences between various environmental samples. There is a need for an easy to use tool to explore the often complex metagenomics data in taxonomic and functional context. Results Here we introduce FANTOM, a tool that allows for exploratory and comparative analysis of metagenomics abundance data integrated with metadata information and biological databases. Importantly, FANTOM can make use of any hierarchical database and it comes supplied with NCBI taxonomic hierarchies as well as KEGG Orthology, COG, PFAM and TIGRFAM databases. Conclusions The software is implemented in Python, is platform independent, and is available at http://www.sysbio.se/Fantom.

  5. Integrating Gigabit ethernet cameras into EPICS at Diamond light source

    International Nuclear Information System (INIS)

    Cobb, T.

    2012-01-01

    At Diamond Light Source a range of cameras are used to provide images for diagnostic purposes in both the accelerator and photo beamlines. The accelerator and existing beamlines use Point Grey Flea and Flea2 Firewire cameras. We have selected Gigabit Ethernet cameras supporting GigE Vision for our new photon beamlines. GigE Vision is an interface standard for high speed Ethernet cameras which encourages inter-operability between manufacturers. This paper describes the challenges encountered while integrating GigE Vision cameras from a range of vendors into EPICS. GigE Vision cameras appear to be more reliable than the Firewire cameras, and the simple cabling makes much easier to move the cameras to different positions. Upcoming power over Ethernet versions of the cameras will reduce the number of cables still further

  6. Sources and fate of antimicrobials in integrated fish-pig and non-integrated tilapia farms.

    Science.gov (United States)

    Li, Kang; Liu, Liping; Zhan, Jia; Scippo, Marie-Louise; Hvidtfeldt, Kristian; Liu, Yuan; Dalsgaard, Anders

    2017-10-01

    Antimicrobial contamination in aquaculture products constitutes a food safety hazard, but little is known about the introduction and accumulation of antimicrobials in integrated fish-pig aquaculture. This study, conducted in 2013, aimed to determine the residues of 11 types of antimicrobials by UPLC-MS/MS analysis in fish feed (n=37), pig feed (n=9), pig manure (n=9), pond sediment (n=20), fish skin (n=20) and muscle tissue (n=20) sampled from integrated tilapia-pig farms, non-integrated tilapia farms and fish feed supply shops. There was a higher occurrence of antimicrobial residues in fish skin from both integrated and non-integrated farms, and in pig manure. Enrofloxacin (3.9-129.3μg/kg) and sulfadiazine (0.7-7.8μg/kg) were commonly detected in fish skin and muscle, pig manure and pond sediment from integrated farms, with different types of antimicrobials found in pig manure and tilapia samples. In non-integrated farms, sulfadiazine (2.5-89.9μg/kg) was the predominant antimicrobial detected in fish skin and muscle, fish feed and pond sediment. In general, antimicrobials seemed not to be commonly transmitted from pig to fish in tilapia-pig integrated farms, and fish feed, pig feed and pond sediment did not seem as important sources of the antimicrobials found in fish from both systems. The frequent findings of antimicrobial residues in fish skin compared with fish muscle was probably due to different pharmacokinetics in different tissue types, which have practical food safety implications since antimicrobial residues monitoring is usually performed analyzing mixed skin and fish muscle samples. Copyright © 2017 Elsevier B.V. All rights reserved.

  7. Mousetrap: An integrated, open-source mouse-tracking package.

    Science.gov (United States)

    Kieslich, Pascal J; Henninger, Felix

    2017-10-01

    Mouse-tracking - the analysis of mouse movements in computerized experiments - is becoming increasingly popular in the cognitive sciences. Mouse movements are taken as an indicator of commitment to or conflict between choice options during the decision process. Using mouse-tracking, researchers have gained insight into the temporal development of cognitive processes across a growing number of psychological domains. In the current article, we present software that offers easy and convenient means of recording and analyzing mouse movements in computerized laboratory experiments. In particular, we introduce and demonstrate the mousetrap plugin that adds mouse-tracking to OpenSesame, a popular general-purpose graphical experiment builder. By integrating with this existing experimental software, mousetrap allows for the creation of mouse-tracking studies through a graphical interface, without requiring programming skills. Thus, researchers can benefit from the core features of a validated software package and the many extensions available for it (e.g., the integration with auxiliary hardware such as eye-tracking, or the support of interactive experiments). In addition, the recorded data can be imported directly into the statistical programming language R using the mousetrap package, which greatly facilitates analysis. Mousetrap is cross-platform, open-source and available free of charge from https://github.com/pascalkieslich/mousetrap-os .

  8. Integrating renewable energy sources in the Portuguese power system

    International Nuclear Information System (INIS)

    Martins, Nuno; Cabral, Pedro; Azevedo, Helena

    2012-01-01

    The integration of large amounts of renewable energy is an important challenge for the future management of electric systems, since it affects the operation of the electric power system and the design of the transmission and distribution network infrastructure. This is specially due to the connection requirements of the renewable energy technologies, to the extension and adjustment of the grid infrastructure and to the identification of new solutions for operational reserve, in order to maintain the overall system flexibility and security. In this paper, the impact of high penetration of intermittent energy sources, expected in long term in the Portuguese Power System, is analysed and the operational reserve requirements to accomplish a reliable and reasonable electrical energy supply are identified. It was concluded that pumped storage power plants, special power plants with regulating capabilities, will have an important task to provide the operational reserve requirements of the Portuguese Power System. This technology assumes a fundamental role not only to ensure the adequate levels of security of supply but also to allow the maximum exploitation of the installed capacity in renewable energy sources. (authors)

  9. Developing an eBook-Integrated High-Fidelity Mobile App Prototype for Promoting Child Motor Skills and Taxonomically Assessing Children's Emotional Responses Using Face and Sound Topology.

    Science.gov (United States)

    Brown, William; Liu, Connie; John, Rita Marie; Ford, Phoebe

    2014-01-01

    Developing gross and fine motor skills and expressing complex emotion is critical for child development. We introduce "StorySense", an eBook-integrated mobile app prototype that can sense face and sound topologies and identify movement and expression to promote children's motor skills and emotional developmental. Currently, most interactive eBooks on mobile devices only leverage "low-motor" interaction (i.e. tapping or swiping). Our app senses a greater breath of motion (e.g. clapping, snapping, and face tracking), and dynamically alters the storyline according to physical responses in ways that encourage the performance of predetermined motor skills ideal for a child's gross and fine motor development. In addition, our app can capture changes in facial topology, which can later be mapped using the Facial Action Coding System (FACS) for later interpretation of emotion. StorySense expands the human computer interaction vocabulary for mobile devices. Potential clinical applications include child development, physical therapy, and autism.

  10. All-source Information Management and Integration for Improved Collective Intelligence Production

    Science.gov (United States)

    2011-06-01

    Intelligence (ELINT) • Open Source Intelligence ( OSINT ) • Technical Intelligence (TECHINT) These intelligence disciplines produce... intelligence , measurement and signature intelligence , signals intelligence , and open - source data, in the production of intelligence . All- source intelligence ...All- Source Information Integration and Management) R&D Project 3 All- Source Intelligence

  11. Taxonomic colouring of phylogenetic trees of protein sequences

    Directory of Open Access Journals (Sweden)

    Andrade-Navarro Miguel A

    2006-02-01

    Full Text Available Abstract Background Phylogenetic analyses of protein families are used to define the evolutionary relationships between homologous proteins. The interpretation of protein-sequence phylogenetic trees requires the examination of the taxonomic properties of the species associated to those sequences. However, there is no online tool to facilitate this interpretation, for example, by automatically attaching taxonomic information to the nodes of a tree, or by interactively colouring the branches of a tree according to any combination of taxonomic divisions. This is especially problematic if the tree contains on the order of hundreds of sequences, which, given the accelerated increase in the size of the protein sequence databases, is a situation that is becoming common. Results We have developed PhyloView, a web based tool for colouring phylogenetic trees upon arbitrary taxonomic properties of the species represented in a protein sequence phylogenetic tree. Provided that the tree contains SwissProt, SpTrembl, or GenBank protein identifiers, the tool retrieves the taxonomic information from the corresponding database. A colour picker displays a summary of the findings and allows the user to associate colours to the leaves of the tree according to any number of taxonomic partitions. Then, the colours are propagated to the branches of the tree. Conclusion PhyloView can be used at http://www.ogic.ca/projects/phyloview/. A tutorial, the software with documentation, and GPL licensed source code, can be accessed at the same web address.

  12. Fast spectral source integration in black hole perturbation calculations

    Science.gov (United States)

    Hopper, Seth; Forseth, Erik; Osburn, Thomas; Evans, Charles R.

    2015-08-01

    This paper presents a new technique for achieving spectral accuracy and fast computational performance in a class of black hole perturbation and gravitational self-force calculations involving extreme mass ratios and generic orbits. Called spectral source integration (SSI), this method should see widespread future use in problems that entail (i) a point-particle description of the small compact object, (ii) frequency domain decomposition, and (iii) the use of the background eccentric geodesic motion. Frequency domain approaches are widely used in both perturbation theory flux-balance calculations and in local gravitational self-force calculations. Recent self-force calculations in Lorenz gauge, using the frequency domain and method of extended homogeneous solutions, have been able to accurately reach eccentricities as high as e ≃0.7 . We show here SSI successfully applied to Lorenz gauge. In a double precision Lorenz gauge code, SSI enhances the accuracy of results and makes a factor of 3 improvement in the overall speed. The primary initial application of SSI—for us its the raison d'être—is in an arbitrary precision mathematica code that computes perturbations of eccentric orbits in the Regge-Wheeler gauge to extraordinarily high accuracy (e.g., 200 decimal places). These high-accuracy eccentric orbit calculations would not be possible without the exponential convergence of SSI. We believe the method will extend to work for inspirals on Kerr and will be the subject of a later publication. SSI borrows concepts from discrete-time signal processing and is used to calculate the mode normalization coefficients in perturbation theory via sums over modest numbers of points around an orbit. A variant of the idea is used to obtain spectral accuracy in a solution of the geodesic orbital motion.

  13. Towards a Terahertz Room-Temperature Integrated Source

    DEFF Research Database (Denmark)

    Leo, Giuseppe; Gérard, Jean-Michel; Reitzenstein, Stephan

    2011-01-01

    We aim at a radically new continuous-wave, electrically pumped THz emitter. Compared to existing THz sources, this source will bring together several advantages that are far from being simultaneously available in any existing source today: compactness, roomtemperature operation, output power around...

  14. Integrated source-risk model for radon: A definition study

    International Nuclear Information System (INIS)

    Laheij, G.M.H.; Aldenkamp, F.J.; Stoop, P.

    1993-10-01

    The purpose of a source-risk model is to support policy making on radon mitigation by comparing effects of various policy options and to enable optimization of counter measures applied to different parts of the source-risk chain. There are several advantages developing and using a source-risk model: risk calculations are standardized; the effects of measures applied to different parts of the source-risk chain can be better compared because interactions are included; and sensitivity analyses can be used to determine the most important parameters within the total source-risk chain. After an inventory of processes and sources to be included in the source-risk chain, the models presently available in the Netherlands are investigated. The models were screened for completeness, validation and operational status. The investigation made clear that, by choosing for each part of the source-risk chain the most convenient model, a source-risk chain model for radon may be realized. However, the calculation of dose out of the radon concentrations and the status of the validation of most models should be improved. Calculations with the proposed source-risk model will give estimations with a large uncertainty at the moment. For further development of the source-risk model an interaction between the source-risk model and experimental research is recommended. Organisational forms of the source-risk model are discussed. A source-risk model in which only simple models are included is also recommended. The other models are operated and administrated by the model owners. The model owners execute their models for a combination of input parameters. The output of the models is stored in a database which will be used for calculations with the source-risk model. 5 figs., 15 tabs., 7 appendices, 14 refs

  15. Synonymization of key pest species within the Bactrocera dorsalis species complex (Diptera: Tephritidae): taxonomic changes based on a review of 20 years of integrative morphological, molecular, cytogenetic, behavioural and chemoecological data

    International Nuclear Information System (INIS)

    Schutze, Mark K.

    2015-01-01

    Bactrocera papayae Drew & Hancock, Bactrocera philippinensis Drew & Hancock, Bactrocera carambolae Drew & Hancock, and Bactrocera invadens Drew, Tsuruta & White are four horticultural pest tephritid fruit fly species that are highly similar, morphologically and genetically, to the destructive pest, the Oriental fruit fly, Bactrocera dorsalis (Hendel) (Diptera: Tephritidae). This similarity has rendered the discovery of reliable diagnostic characters problematic, which, in view of the economic importance of these taxa and the international trade implications, has resulted in ongoing difficulties for many areas of plant protection and food security. Consequently, a major international collaborative and integrated multidisciplinary research effort was initiated in 2009 to build upon existing literature with the specific aim of resolving biological species limits among B. papayae, B. philippinensis, B. carambolae, B. invadens and B. dorsalis to overcome constraints to pest management and international trade. Bactrocera philippinensis has recently been synonymized with B. papayae as a result of this initiative and this review corroborates that finding; however, the other names remain in use. While consistent characters have been found to reliably distinguish B. carambolae from B. dorsalis, B. invadens and B. papayae, no such characters have been found to differentiate the latter three putative species. We conclude that B. carambolae is a valid species and that the remaining taxa, B. dorsalis, B. invadens and B. papayae, represent the same species. Thus, we consider B. dorsalis (Hendel) as the senior synonym of B. papayae Drew and Hancock syn.n. and B. invadens Drew, Tsuruta & White syn.n. A redescription of B. dorsalis is provided. Given the agricultural importance of B. dorsalis, this taxonomic decision will have significant global plant biosecurity implications, affecting pest management, quarantine, international trade, postharvest treatment and basic research

  16. [A new taxonomic system of the genus Murraya (Rutaceae) based on integration of morphology-based taxonomy and chemotaxonomy; and a philological survey on M. exotica in view of the relationship between Okinawa and China].

    Science.gov (United States)

    Kinoshita, Takeshi

    2014-01-01

    This review concerns the taxonomic status of the genus Murraya in tribe Clausenae, subfamily Aurantioideae, family Rutaceae, and presents a new system integrating both morphology-based taxonomy and chemotaxonomy. This genus has been morphologically divided into the sects Murraya and Bergera. This dichotomy is justified by the noticeable difference of secondary metabolites with 3-prenylindoles in Murraya and carbazoles in Bergera. As for other metabolites of genus Murraya, coumarins are found in both sects, but differ clearly in types; 8-prenylcoumarins occur throughout the sect Murraya whereas geranylated furocoumarins are known from some species of the sect Bergera. As far as chemical properties are concerned, sect Bergera is much closer to genus Clausena than sect Murraya, suggesting the dichotomy of genus Murraya to be generic rather than sectional. 8-Prenylcoumarins characterizing sect Murraya play a decisive role in the distinction of M. exotica from M. paniculata that occurs most widely in subtropical and tropical Asia and is well known for morphologic as well as chemical diversity. Though the morphological difference between the two species is slight only in leaves and leaflets, the distinction is well substantiated by the following chemical feature: 7-OMe-8-prenylcoumarins occur in M. exotica whereas 5,7-di-OMe-8-prenylcoumarins in M. paniculata. Sect Murraya has a very close relation to genus Merrillia that is chemically characterized by similar types of 8-prenylcoumarins, and is also related to a certain extent to genus Micromelum. M. exotica is philologically surveyed in view of the delicate relationships between Okinawa, the only habitat of this plant in Japan, and China in order to clarify its historical background.

  17. Ground Source Integrated Heat Pump (GS-IHP) Development

    Energy Technology Data Exchange (ETDEWEB)

    Baxter, V. D. [ORNL; Rice, K. [ORNL; Murphy, R. [ORNL; Munk, J. [ORNL; Ally, Moonis [ORNL; Shen, Bo [ORNL; Craddick, William [ORNL; Hearn, Shawn A. [ClimateMaster, Inc.

    2013-05-24

    Between October 2008 and May 2013 ORNL and ClimateMaster, Inc. (CM) engaged in a Cooperative Research and Development Agreement (CRADA) to develop a groundsource integrated heat pump (GS-IHP) system for the US residential market. A initial prototype was designed and fabricated, lab-tested, and modeled in TRNSYS (SOLAR Energy Laboratory, et al, 2010) to predict annual performance relative to 1) a baseline suite of equipment meeting minimum efficiency standards in effect in 2006 (combination of air-source heat pump (ASHP) and resistance water heater) and 2) a state-of-the-art (SOA) two-capacity ground-source heat pump with desuperheater water heater (WH) option (GSHPwDS). Predicted total annual energy savings, while providing space conditioning and water heating for a 2600 ft{sup 2} (242 m{sup 2}) house at 5 U.S. locations, ranged from 52 to 59%, averaging 55%, relative to the minimum efficiency suite. Predicted energy use for water heating was reduced 68 to 78% relative to resistance WH. Predicted total annual savings for the GSHPwDS relative to the same baseline averaged 22.6% with water heating energy use reduced by 10 to 30% from desuperheater contributions. The 1st generation (or alpha) prototype design for the GS-IHP was finalized in 2010 and field test samples were fabricated for testing by CM and by ORNL. Two of the alpha units were installed in 3700 ft{sup 2} (345 m{sup 2}) houses at the ZEBRAlliance site in Oak Ridge and field tested during 2011. Based on the steady-state performance demonstrated by the GS-IHPs it was projected that it would achieve >52% energy savings relative to the minimum efficiency suite at this specific site. A number of operational issues with the alpha units were identified indicating design changes needed to the system before market introduction could be accomplished. These were communicated to CM throughout the field test period. Based on the alpha unit test results and the diagnostic information coming from the field test

  18. The Role of CHP Plants in the Integration of Fluctuating Renewable Energy Sources

    DEFF Research Database (Denmark)

    Lund, Henrik

    2002-01-01

    The paper is an Expression of Interest to the European Commission about renewable energy sources and their integration in a energy system......The paper is an Expression of Interest to the European Commission about renewable energy sources and their integration in a energy system...

  19. Logistic Regression Modeling of Diminishing Manufacturing Sources for Integrated Circuits

    National Research Council Canada - National Science Library

    Gravier, Michael

    1999-01-01

    .... This thesis draws on available data from the electronics integrated circuit industry to attempt to assess whether statistical modeling offers a viable method for predicting the presence of DMSMS...

  20. Vertical integration as a source of market power

    Energy Technology Data Exchange (ETDEWEB)

    Phelps, J.H.

    1981-11-01

    This paper has put forward a theory of vertial integration where the ability of a group of firms to engage in noncompetitive pricing is increased by altering conjectural variations. An analysis of conditions faced by major oil companies at refining indicated little likelihood of market power, short of a complex, secret price fixing agreement. Vertical integration to branded retail outlets appears to have created the ability to price noncompetitively without overt collusion. More interesting for vertical policy are the results on non price rivalry where excess profits appear to have been turned into social costs.

  1. Integrating source-language context into phrase-based statistical machine translation

    NARCIS (Netherlands)

    Haque, R.; Kumar Naskar, S.; Bosch, A.P.J. van den; Way, A.

    2011-01-01

    The translation features typically used in Phrase-Based Statistical Machine Translation (PB-SMT) model dependencies between the source and target phrases, but not among the phrases in the source language themselves. A swathe of research has demonstrated that integrating source context modelling

  2. Large scale grid integration of renewable energy sources

    CERN Document Server

    Moreno-Munoz, Antonio

    2017-01-01

    This book presents comprehensive coverage of the means to integrate renewable power, namely wind and solar power. It looks at new approaches to meet the challenges, such as increasing interconnection capacity among geographical areas, hybridisation of different distributed energy resources and building up demand response capabilities.

  3. Source-Message-Receiver in Integrated Marketing Communication

    Science.gov (United States)

    Broussard, Sharee LeBlanc

    2011-01-01

    This is an abbreviation of the author's dissertation. Because integrated marketing communication (IMC) research has traditionally been problematic, this study used an existing scale to determine that higher educational institutional advancement (alumni, marketing-communications, development) is an appropriate venue to study the process model of…

  4. MEMS-Electronic-Photonic Heterogeneous Integrated FMCW Ladar Source

    Science.gov (United States)

    2015-12-18

    1   1.1.   E-­‐ PHI  PHASE  2  –  MEMS  LADAR  SOURCE...4   3.2.   PROPOSED  EO-­‐PLL   ARCHITECTURE  WITH  GATED  RAMP-­‐SWITCHING... PHI  Phase  2  –  MEMS  LADAR  Source   In  Phase  2,  we  continue  the  development  of  the  FMCW  LADAR

  5. Quantum-dot-based integrated non-linear sources

    DEFF Research Database (Denmark)

    Bernard, Alice; Mariani, Silvia; Andronico, Alessio

    2015-01-01

    The authors report on the design and the preliminary characterisation of two active non-linear sources in the terahertz and near-infrared range. The former is associated to difference-frequency generation between whispering gallery modes of an AlGaAs microring resonator, whereas the latter...

  6. Modeling of an autonomous microgrid for renewable energy sources integration

    DEFF Research Database (Denmark)

    Serban, I.; Teodorescu, Remus; Guerrero, Josep M.

    2009-01-01

    The frequency stability analysis in an autonomous microgrid (MG) with renewable energy sources (RES) is a continuously studied issue. This paper presents an original method for modeling an autonomous MG with a battery energy storage system (BESS) and a wind power plant (WPP), with the purpose...

  7. Open source communities: an integrally informed approach to organizational transformation

    NARCIS (Netherlands)

    Millar-Schijf, Carla C.J.M.; Choi, C.J.; Russell, E.T.; Kim, J.-B.

    2005-01-01

    Purpose - To reframe analysis of the open source software (OSS) phenomenon from an AQAL perspectiveDesign/methodology/approach - The approach is a review of current research thinking and application of the AQAL framework to suggest resolution of polarizations.Findings - The authors find that AQAL is

  8. Integrated Management Program for Radioactive Sealed Sources in Egypt IMPRSS

    International Nuclear Information System (INIS)

    Hasan, A.; El-Adham, K.

    2004-01-01

    Sealed sources are usually in capsules made of stainless steel. They are the size of a pen or a finger and contain one of hundreds of radioactive elements (e.g., Iridium, Radium) or their isotopes. They are air-tight and very durable, contain the radioactive material but not radiation. They are used in the health sector, industry, military, and universities. Incidents occurred in Met Halfa, Egypt, 2000 (Iridium-192); Goiania, Brazil, 1987 (Cesium-137); Mexico and Southwest U.S., 1977 -1984 (Cobalt-60); Peru, 1999 (Iridium-1992); Poland 2001 (Cobalt-60). The IMPRSS Mission is based on a joined partnership between the Egyptian Atomic Energy Authority, the Egyptian Ministry of Health, the Sandia National Laboratories, the International Atomic Energy Agency and others. The IMPRSS Mission protects human health and the environment in Egypt from mismanaged sealed sources, is developed jointly with MOH and EAEA, provides capabilities for managing radioactive sealed sources in Egypt, increases public awareness, provides education and training, improves emergency response capabilities, develops a permanent disposal facility, ensures the program is self-sustaining and ensures close coordination with the IAEA. Infrastructure how to manage sealed sources is discussed. It includes awareness, tracking and inventory control, security, recovery, conditioning and storage, recycling and disposal. Emergency response, regulatory reform, education and training and its targets are provided. The government of Egypt can protect the people of Egypt and is ready for emergencies. Prevention is the first line of defence and detection is the second line of defence. Adequate Emergency Response saves lives and adequate control reduces risk of mismanaged uses or deliberate misuses of sources. A Cradle-to-Grave approach is built on existing capabilities at EAEA and MOH

  9. Integrating HCI Specialists into Open Source Software Development Projects

    Science.gov (United States)

    Hedberg, Henrik; Iivari, Netta

    Typical open source software (OSS) development projects are organized around technically talented developers, whose communication is based on technical aspects and source code. Decision-making power is gained through proven competence and activity in the project, and non-technical end-user opinions are too many times neglected. In addition, also human-computer interaction (HCI) specialists have encountered difficulties in trying to participate in OSS projects, because there seems to be no clear authority and responsibility for them. In this paper, based on HCI and OSS literature, we introduce an extended OSS development project organization model that adds a new level of communication and roles for attending human aspects of software. The proposed model makes the existence of HCI specialists visible in the projects, and promotes interaction between developers and the HCI specialists in the course of a project.

  10. Conflicting but close: Readers' integration of information sources as a function of their disagreement.

    Science.gov (United States)

    Saux, Gaston; Britt, Anne; Le Bigot, Ludovic; Vibert, Nicolas; Burin, Debora; Rouet, Jean-François

    2017-01-01

    According to the documents model framework (Britt, Perfetti, Sandak, & Rouet, 1999), readers' detection of contradictions within texts increases their integration of source-content links (i.e., who says what). This study examines whether conflict may also strengthen the relationship between the respective sources. In two experiments, participants read brief news reports containing two critical statements attributed to different sources. In half of the reports, the statements were consistent with each other, whereas in the other half they were discrepant. Participants were tested for source memory and source integration in an immediate item-recognition task (Experiment 1) and a cued recall task (Experiments 1 and 2). In both experiments, discrepancies increased readers' memory for sources. We found that discrepant sources enhanced retrieval of the other source compared to consistent sources (using a delayed recall measure; Experiments 1 and 2). However, discrepant sources failed to prime the other source as evidenced in an online recognition measure (Experiment 1). We argue that discrepancies promoted the construction of links between sources, but that integration did not take place during reading.

  11. Exploring historical trends using taxonomic name metadata

    Directory of Open Access Journals (Sweden)

    Schenk Ryan

    2008-05-01

    Full Text Available Abstract Background Authority and year information have been attached to taxonomic names since Linnaean times. The systematic structure of taxonomic nomenclature facilitates the ability to develop tools that can be used to explore historical trends that may be associated with taxonomy. Results From the over 10.7 million taxonomic names that are part of the uBio system 4, approximately 3 million names were identified to have taxonomic authority information from the years 1750 to 2004. A pipe-delimited file was then generated, organized according to a Linnaean hierarchy and by years from 1750 to 2004, and imported into an Excel workbook. A series of macros were developed to create an Excel-based tool and a complementary Web site to explore the taxonomic data. A cursory and speculative analysis of the data reveals observable trends that may be attributable to significant events that are of both taxonomic (e.g., publishing of key monographs and societal importance (e.g., world wars. The findings also help quantify the number of taxonomic descriptions that may be made available through digitization initiatives. Conclusion Temporal organization of taxonomic data can be used to identify interesting biological epochs relative to historically significant events and ongoing efforts. We have developed an Excel workbook and complementary Web site that enables one to explore taxonomic trends for Linnaean taxonomic groupings, from Kingdoms to Families.

  12. Integrated photon sources for quantum information science applications

    Science.gov (United States)

    Fanto, M. L.; Tison, C. C.; Steidle, J. A.; Lu, T.; Wang, Z.; Mogent, N. A.; Rizzo, A.; Thomas, P. M.; Preble, S. F.; Alsing, P. M.; Englund, D. R.

    2017-10-01

    Ring resonators are used as photon pair sources by taking advantage of the materials second or third order non- linearities through the processes of spontaneous parametric downconversion and spontaneous four wave mixing respectively. Two materials of interest for these applications are silicon for the infrared and aluminum nitride for the ultraviolet through the infrared. When fabricated into ring type sources they are capable of producing pairs of indistinguishable photons but typically suffer from an effective 50% loss. By slightly decoupling the input waveguide from the ring, the drop port coincidence ratio can be significantly increased with the trade-off being that the pump is less efficiently coupled into the ring. Ring resonators with this design have been demonstrated having coincidence ratios of 96% but requiring a factor of 10 increase in the pump power. Through the modification of the coupling design that relies on additional spectral dependence, it is possible to achieve similar coincidence ratios without the increased pumping requirement. This can be achieved by coupling the input waveguide to the ring multiple times, thus creating a Mach-Zehnder interferometer. This coupler design can be used on both sides of the ring resonator so that resonances supported by one of the couplers are suppressed by the other. This is the ideal configuration for a photon-pair source as it can only support the pump photons at the input side while only allowing the generated photons to leave through the output side. Recently, this device has been realized with preliminary results exhibiting the desired spectral dependence and with a coincidence ratio as high as 97% while allowing the pump to be nearly critically coupled to the ring. The demonstrated near unity coincidence ratio infers a near maximal heralding efficiency from the fabricated device. This device has the potential to greatly improve the scalability and performance of quantum computing and communication systems.

  13. Spallation Neutron Source Second Target Station Integrated Systems Update

    Energy Technology Data Exchange (ETDEWEB)

    Ankner, John Francis [ORNL; An, Ke [ORNL; Blokland, Willem [ORNL; Charlton, Timothy R. [ORNL; Coates, Leighton [ORNL; Dayton, Michael J. [ORNL; Dean, Robert A. [ORNL; Dominguez-Ontiveros, Elvis E. [ORNL; Ehlers, Georg [ORNL; Gallmeier, Franz X. [ORNL; Graves, Van B. [ORNL; Heller, William T. [ORNL; Holmes, Jeffrey A. [ORNL; Huq, Ashfia [ORNL; Lumsden, Mark D. [ORNL; McHargue, William M. [ORNL; McManamy, Thomas J. [ORNL; Plum, Michael A. [ORNL; Rajic, Slobodan [ORNL; Remec, Igor [ORNL; Robertson, Lee [ORNL; Sala, Gabriele [ORNL; Stoica, Alexandru Dan [ORNL; Trotter, Steven M. [ORNL; Winn, Barry L. [ORNL; Abudureyimu, Reheman [ORNL; Rennich, Mark J. [ORNL; Herwig, Kenneth W. [ORNL

    2017-04-01

    The Spallation Neutron Source (SNS) was designed from the beginning to accommodate both an accelerator upgrade to increase the proton power and a second target station (STS). Four workshops were organized in 2013 and 2014 to identify key science areas and challenges where neutrons will play a vital role [1-4]. Participants concluded that the addition of STS to the existing ORNL neutron sources was needed to complement the strengths of High Flux Isotope Reactor (HFIR) and the SNS first target station (FTS). To address the capability gaps identified in the workshops, a study was undertaken to identify instrument concepts that could provide the required new science capabilities. The study outlined 22 instrument concepts and presented an initial science case for STS [5]. These instrument concepts formed the basis of a planning suite of instruments whose requirements determined an initial site layout and moderator selection. An STS Technical Design Report (TDR) documented the STS concept based on those choices [6]. Since issue of the TDR, the STS concept has significantly matured as described in this document.

  14. Integration of asynchronous knowledge sources in a novel speech recognition framework

    OpenAIRE

    Van hamme, Hugo

    2008-01-01

    Van hamme H., ''Integration of asynchronous knowledge sources in a novel speech recognition framework'', Proceedings ITRW on speech analysis and processing for knowledge discovery, 4 pp., June 2008, Aalborg, Denmark.

  15. Time-domain single-source integral equations for analyzing scattering from homogeneous penetrable objects

    KAUST Repository

    Valdé s, Felipe; Andriulli, Francesco P.; Bagci, Hakan; Michielssen, Eric

    2013-01-01

    Single-source time-domain electric-and magnetic-field integral equations for analyzing scattering from homogeneous penetrable objects are presented. Their temporal discretization is effected by using shifted piecewise polynomial temporal basis

  16. Integration of Heterogeneous Information Sources into a Knowledge Resource Management System for Lifelong Learning

    NARCIS (Netherlands)

    Demidova, Elena; Ternier, Stefaan; Olmedilla, Daniel; Duval, Erik; Dicerto, Michele; Stefanov, Krassen; Sacristán, Naiara

    2007-01-01

    Demidova, E., Ternier, S., Olmedilla, D., Duval, E., Dicerto, M., Stefanov, K., et al. (2007). Integration of Heterogeneous Information Sources into a Knowledge Resource Management System for Lifelong. TENCompetence Workshop on Service Oriented Approaches and Lifelong Competence Development

  17. Stechiometric neodymium compounds as new materials for light sources in integrated optics

    International Nuclear Information System (INIS)

    Malinowski, M.

    1981-01-01

    Short review of physico-chemical properties of stechiometric neodymium compounds has been presented. Several constructions of minilasers as promising light sources for integrated optics devices have been described. (author)

  18. Compact Integrated DBR Laser Source for Absorption Lidar Instruments, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — We propose to demonstrate a compact integrated laser module that addresses the requirements of the laser source in a water vapor differential absorption lidar (DIAL)...

  19. Sources and fate of antimicrobials in integrated fish-pig and non-integrated tilapia farms

    DEFF Research Database (Denmark)

    Li, Kang; Liu, Liping; Zhan, Jia

    2017-01-01

    residues in fish skin from both integrated and non-integrated farms, and in pig manure. Enrofloxacin (3.9–129.3 μg/kg) and sulfadiazine (0.7–7.8 μg/kg) were commonly detected in fish skin and muscle, pig manure and pond sediment from integrated farms, with different types of antimicrobials found in pig...

  20. Hydrogen and renewable energy sources integrated system for greenhouse heating

    Directory of Open Access Journals (Sweden)

    Ileana Blanco

    2013-09-01

    Full Text Available A research is under development at the Department of Agro- Environmental Sciences of the University of Bari “Aldo Moro” in order to investigate the suitable solutions of a power system based on solar energy (photovoltaic and hydrogen, integrated with a geothermal heat pump for powering a self sustained heated greenhouse. The electrical energy for heat pump operation is provided by a purpose-built array of solar photovoltaic modules, which supplies also a water electrolyser system controlled by embedded pc; the generated dry hydrogen gas is conserved in suitable pressured storage tank. The hydrogen is used to produce electricity in a fuel cell in order to meet the above mentioned heat pump power demand when the photovoltaic system is inactive during winter night-time or the solar radiation level is insufficient to meet the electrical demand. The present work reports some theoretical and observed data about the electrolyzer operation. Indeed the electrolyzer has required particular attention because during the experimental tests it did not show a stable operation and it was registered a performance not properly consistent with the predicted performance by means of the theoretical study.

  1. Integral Fast Reactor: A future source of nuclear energy

    International Nuclear Information System (INIS)

    Southon, R.

    1993-01-01

    Argonne National Laboratory is developing a reactor concept that would be an important part of the worlds energy future. This report discusses the Integral Fast Reactor (IFR) concept which provides significant improvements over current generation reactors in reactor safety, plant complexity, nuclear proliferation, and waste generation. Two major facilities, a reactor and a fuel cycle facility, make up the IFR concept. The reactor uses fast neutrons and metal fuel in a sodium coolant at atmospheric pressure that relies on laws of physics to keep it safe. The fuel cycle facility is a hot cell using remote handling techniques for fabricating reactor fuel. The fuel feed stock includes spent fuel from the reactor, and potentially, spent light water reactor fuel and plutonium from weapons. This paper discusses the unique features of the IFR concept and the differences the quality assurance program has from current commercial practices. The IFR concept provides an opportunity to design a quality assurance program that makes use of the best contemporary ideas on management and quality

  2. Global sourcing - performance and integration : reflections on performance, implications from cross-functional and external integration

    NARCIS (Netherlands)

    Horn, Philipp

    2013-01-01

    Despite the fact that firms and individuals have been sourcing on a global basis since ancient times, global sourcing as a topic has received considerable attention from managers and scholars in recent years. Global business has been reported to be growing considerably during the last decades and

  3. Optical Characteristics of a Multichannel Hybrid Integrated Light Source for Ultra-High-Bandwidth Optical Interconnections

    Directory of Open Access Journals (Sweden)

    Takanori Shimizu

    2015-11-01

    Full Text Available The optical characteristics of a multi-channel hybrid integrated light source were described for an optical interconnection with a bandwidth of over 10 Tbit/s. The power uniformity of the relative intensity of a 1000-channel light source was shown, and the minimum standard deviation s of the optical power of the 200 output ports at each 25-channel laser diode (LD array was estimated to be 0.49 dB. This hybrid integrated light source is expected to be easily adaptable to a photonics-electronics convergence system for ultra-high-bandwidth interchip interconnections.

  4. Fuel-efficiency of hydrogen and heat storage technologies for integration of fluctuating renewable energy sources

    DEFF Research Database (Denmark)

    Mathiesen, Brian Vad; Lund, Henrik

    2005-01-01

    This paper presents the methodology and results of analysing the use of different energy storage technologies in the task of integration of fluctuating renewable energy sources (RES) into the electricity supply. The analysis is done on the complete electricity system including renewable energy...... sources as well as power plants and CHP (Combined heat and power production). Emphasis is put on the need for ancillary services. Devices to store electricity as well as devices to store heat can be used to help the integration of fluctuating sources. Electricity storage technologies can be used...... to relocate electricity production directly from the sources, while heat storage devices can be used to relocate the electricity production from CHP plants and hereby improve the ability to integrate RES. The analyses are done by advanced computer modelling and the results are given as diagrams showing...

  5. [Taxonomic theory for non-classical systematics].

    Science.gov (United States)

    Pavlinov, I Ia

    2012-01-01

    Outlined briefly are basic principles of construing general taxonomic theory for biological systematics considered in the context of non-classical scientific paradigm. The necessity of such kind of theory is substantiated, and some key points of its elaboration are exposed: its interpretation as a framework concept for the partial taxonomic theories in various schools of systematics; elaboration of idea of cognitive situation including three interrelated components, namely subject, object, and epistemic ones; its construing as a content-wisely interpreted quasi-axiomatics, with strong structuring of its conceptual space including demarcation between axioms and inferring rules; its construing as a "conceptual pyramid" of concepts of various levels of generality; inclusion of a basic model into definition of the taxonomic system (classification) regulating its content. Two problems are indicated as fundamental: definition of taxonomic diversity as a subject domain for the systematics as a whole; definition of onto-epistemological status of taxonomic system (classification) in general and of taxa in particular.

  6. Semantic integration of gene expression analysis tools and data sources using software connectors

    Science.gov (United States)

    2013-01-01

    Background The study and analysis of gene expression measurements is the primary focus of functional genomics. Once expression data is available, biologists are faced with the task of extracting (new) knowledge associated to the underlying biological phenomenon. Most often, in order to perform this task, biologists execute a number of analysis activities on the available gene expression dataset rather than a single analysis activity. The integration of heteregeneous tools and data sources to create an integrated analysis environment represents a challenging and error-prone task. Semantic integration enables the assignment of unambiguous meanings to data shared among different applications in an integrated environment, allowing the exchange of data in a semantically consistent and meaningful way. This work aims at developing an ontology-based methodology for the semantic integration of gene expression analysis tools and data sources. The proposed methodology relies on software connectors to support not only the access to heterogeneous data sources but also the definition of transformation rules on exchanged data. Results We have studied the different challenges involved in the integration of computer systems and the role software connectors play in this task. We have also studied a number of gene expression technologies, analysis tools and related ontologies in order to devise basic integration scenarios and propose a reference ontology for the gene expression domain. Then, we have defined a number of activities and associated guidelines to prescribe how the development of connectors should be carried out. Finally, we have applied the proposed methodology in the construction of three different integration scenarios involving the use of different tools for the analysis of different types of gene expression data. Conclusions The proposed methodology facilitates the development of connectors capable of semantically integrating different gene expression analysis tools

  7. Design of integral shutters for the beamlines at the Advanced Photon Source

    International Nuclear Information System (INIS)

    Chang, J.; Shu, D.; Nian, H.L.; Kuzay, T.M.; Job, P.K.

    1994-01-01

    An integral shutter is a device that integrates a white-beam stop, monochromatic-beam (mono-beam) shutters, a safety stop, and a collimator into one assembly to save space in the photon beamline. Various integral shutters have been developed as standard components for the beamlines at the Advanced Photon Source. The integral shutters are designed to be operated in white-beam mode or mono-beam mode. With regard to safety, each mode of operation is secured by locking certain devices in their up or down positions. Some of the components of the integral shutters share designs similar to the front-end shutters or fixed masks. Design details of the integral shutters are presented

  8. Integrated Quantum Optics: Experiments towards integrated quantum-light sources and quantum-enhanced sensing

    DEFF Research Database (Denmark)

    Hoff, Ulrich Busk

    The work presented in this thesis is focused on experimental application and generation of continuous variable quantum correlated states of light in integrated dielectric structures. Squeezed states are among the most exploited continuous variable optical states for free-space quantum-enhanced se...... is presented and an optimized device design is proposed. The devices have been fabricated and tested optically and preliminary interrogations of the output quantum noise have been performed....

  9. Methods of formation of efficiency indexes of electric power sources integration in regional electric power systems

    International Nuclear Information System (INIS)

    Marder, L.I.; Myzin, A.I.

    1993-01-01

    A methodic approach to the grounding of the integration process efficiency within the Unified electric power system is given together with the selection of a rational areal structure and concentration of power-generating source capacities. Formation of an economic functional according to alternative scenavies including the cost components taking account of the regional interests is considered. A method for estimation and distribution of the effect from electric power production integration in the power systems under new economic conditions is proposed

  10. Integrating a Traveling Wave Tube into an AECR-U ion source

    Energy Technology Data Exchange (ETDEWEB)

    Covo, Michel Kireeff; Benitez, Janilee Y.; Ratti, Alessandro; Vujic, Jasmina L.

    2011-07-01

    An RF system of 500W - 10.75 to 12.75 GHz was designed and integrated into the Advanced Electron Cyclotron Resonance - Upgrade (AECR-U) ion source of the 88-Inch Cyclotron at Lawrence Berkeley National Laboratory. The AECR-U produces ion beams for the Cyclotron giving large flexibility of ion species and charge states. The broadband frequency of a Traveling Wave Tube (TWT) allows modifying the volume that couples and heats the plasma. The TWT system design and integration with the AECR-U ion source and results from commissioning are presented.

  11. Total luminous flux measurement for flexible surface sources with an integrating sphere photometer

    International Nuclear Information System (INIS)

    Yu, Hsueh-Ling; Liu, Wen-Chun

    2014-01-01

    Applying an integrating sphere photometer for total luminous flux measurement is a widely used method. However, the measurement accuracy depends on the spatial uniformity of the integrating sphere, especially when the test sample has a different light distribution from that of the standard source. Therefore, spatial correction is needed to eliminate the effect caused by non-uniformity. To reduce the inconvenience of spatial correction but retain the measurement accuracy, a new type of working standard is designed for flexible and curved surface sources. Applying this new type standard source, the measurement deviation due to different orientations is reduced by an order of magnitude compared with using a naked incandescent lamp as the standard source. (paper)

  12. Multi-Sensor Integration to Map Odor Distribution for the Detection of Chemical Sources

    Directory of Open Access Journals (Sweden)

    Xiang Gao

    2016-07-01

    Full Text Available This paper addresses the problem of mapping odor distribution derived from a chemical source using multi-sensor integration and reasoning system design. Odor localization is the problem of finding the source of an odor or other volatile chemical. Most localization methods require a mobile vehicle to follow an odor plume along its entire path, which is time consuming and may be especially difficult in a cluttered environment. To solve both of the above challenges, this paper proposes a novel algorithm that combines data from odor and anemometer sensors, and combine sensors’ data at different positions. Initially, a multi-sensor integration method, together with the path of airflow was used to map the pattern of odor particle movement. Then, more sensors are introduced at specific regions to determine the probable location of the odor source. Finally, the results of odor source location simulation and a real experiment are presented.

  13. INTEGRAL discovery of a new transient source: IGR J16374-5043

    DEFF Research Database (Denmark)

    Pavan, L.; Terrier, R.; Bozzo, E.

    2010-01-01

    During the INTEGRAL observations of RX J1713.7-3946 (PI R. Terrier), performed between 2010-08-21 03:39 and 2010-08-23 12:03, a new transient source was discovered by the soft gamma-ray imager IBIS/ISGRI (17-300 keV). The source is detected at a significance level of 10 sigma in the 20-40 keV ene...

  14. Non point source pollution modelling in the watershed managed by Integrated Conctructed Wetlands: A GIS approach.

    OpenAIRE

    Vyavahare, Nilesh

    2008-01-01

    The non-point source pollution has been recognised as main cause of eutrophication in Ireland (EPA Ireland, 2001). Integrated Constructed Wetland (ICW) is a management practice adopted in Annestown stream watershed, located in the south county of Waterford in Ireland, used to cleanse farmyard runoff. Present study forms the annual pollution budget for the Annestown stream watershed. The amount of pollution from non-point sources flowing into the stream was simulated by using GIS techniques; u...

  15. Dynamic pricing based on a cloud computing framework to support the integration of renewable energy sources

    OpenAIRE

    Rajeev Thankappan Nair; Ashok Sankar

    2014-01-01

    Integration of renewable energy sources into the electric grid in the domestic sector results in bidirectional energy flow from the supply side of the consumer to the grid. Traditional pricing methods are difficult to implement in such a situation of bidirectional energy flow and they face operational challenges on the application of price-based demand side management programme because of the intermittent characteristics of renewable energy sources. In this study, a dynamic pricing method usi...

  16. Metacoder: An R package for visualization and manipulation of community taxonomic diversity data.

    Directory of Open Access Journals (Sweden)

    Zachary S L Foster

    2017-02-01

    Full Text Available Community-level data, the type generated by an increasing number of metabarcoding studies, is often graphed as stacked bar charts or pie graphs that use color to represent taxa. These graph types do not convey the hierarchical structure of taxonomic classifications and are limited by the use of color for categories. As an alternative, we developed metacoder, an R package for easily parsing, manipulating, and graphing publication-ready plots of hierarchical data. Metacoder includes a dynamic and flexible function that can parse most text-based formats that contain taxonomic classifications, taxon names, taxon identifiers, or sequence identifiers. Metacoder can then subset, sample, and order this parsed data using a set of intuitive functions that take into account the hierarchical nature of the data. Finally, an extremely flexible plotting function enables quantitative representation of up to 4 arbitrary statistics simultaneously in a tree format by mapping statistics to the color and size of tree nodes and edges. Metacoder also allows exploration of barcode primer bias by integrating functions to run digital PCR. Although it has been designed for data from metabarcoding research, metacoder can easily be applied to any data that has a hierarchical component such as gene ontology or geographic location data. Our package complements currently available tools for community analysis and is provided open source with an extensive online user manual.

  17. An integrated approach to assess heavy metal source apportionment in peri-urban agricultural soils

    Energy Technology Data Exchange (ETDEWEB)

    Huang, Ying; Li, Tingqiang; Wu, Chengxian [Ministry of Education Key Laboratory of Environmental Remediation and Ecological Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China); He, Zhenli [University of Florida, Institute of Food and Agricultural Sciences, Indian River Research and Education Center, Fort Pierce, FL 34945 (United States); Japenga, Jan; Deng, Meihua [Ministry of Education Key Laboratory of Environmental Remediation and Ecological Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China); Yang, Xiaoe, E-mail: xeyang@zju.edu.cn [Ministry of Education Key Laboratory of Environmental Remediation and Ecological Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058 (China)

    2015-12-15

    Highlights: • Heavy metal source apportionment was conducted in peri-urban agricultural areas. • Precise and quantified results were obtained by using isotope ratio analysis. • The integration of IRA, GIS, PCA, and CA was proved to be more reliable. • Hg pollution was from the use of organic fertilizers in this area. - Abstract: Three techniques (Isotope Ratio Analysis, GIS mapping, and Multivariate Statistical Analysis) were integrated to assess heavy metal pollution and source apportionment in peri-urban agricultural soils. The soils in the study area were moderately polluted with cadmium (Cd) and mercury (Hg), lightly polluted with lead (Pb), and chromium (Cr). GIS Mapping suggested Cd pollution originates from point sources, whereas Hg, Pb, Cr could be traced back to both point and non-point sources. Principal component analysis (PCA) indicated aluminum (Al), manganese (Mn), nickel (Ni) were mainly inherited from natural sources, while Hg, Pb, and Cd were associated with two different kinds of anthropogenic sources. Cluster analysis (CA) further identified fertilizers, waste water, industrial solid wastes, road dust, and atmospheric deposition as potential sources. Based on isotope ratio analysis (IRA) organic fertilizers and road dusts accounted for 74–100% and 0–24% of the total Hg input, while road dusts and solid wastes contributed for 0–80% and 19–100% of the Pb input. This study provides a reliable approach for heavy metal source apportionment in this particular peri-urban area, with a clear potential for future application in other regions.

  18. An integrated approach to assess heavy metal source apportionment in peri-urban agricultural soils

    International Nuclear Information System (INIS)

    Huang, Ying; Li, Tingqiang; Wu, Chengxian; He, Zhenli; Japenga, Jan; Deng, Meihua; Yang, Xiaoe

    2015-01-01

    Highlights: • Heavy metal source apportionment was conducted in peri-urban agricultural areas. • Precise and quantified results were obtained by using isotope ratio analysis. • The integration of IRA, GIS, PCA, and CA was proved to be more reliable. • Hg pollution was from the use of organic fertilizers in this area. - Abstract: Three techniques (Isotope Ratio Analysis, GIS mapping, and Multivariate Statistical Analysis) were integrated to assess heavy metal pollution and source apportionment in peri-urban agricultural soils. The soils in the study area were moderately polluted with cadmium (Cd) and mercury (Hg), lightly polluted with lead (Pb), and chromium (Cr). GIS Mapping suggested Cd pollution originates from point sources, whereas Hg, Pb, Cr could be traced back to both point and non-point sources. Principal component analysis (PCA) indicated aluminum (Al), manganese (Mn), nickel (Ni) were mainly inherited from natural sources, while Hg, Pb, and Cd were associated with two different kinds of anthropogenic sources. Cluster analysis (CA) further identified fertilizers, waste water, industrial solid wastes, road dust, and atmospheric deposition as potential sources. Based on isotope ratio analysis (IRA) organic fertilizers and road dusts accounted for 74–100% and 0–24% of the total Hg input, while road dusts and solid wastes contributed for 0–80% and 19–100% of the Pb input. This study provides a reliable approach for heavy metal source apportionment in this particular peri-urban area, with a clear potential for future application in other regions.

  19. The nutty world of hazel names - a crtitical taxonomic checklist of the genus Corylus (Betulaceae)

    OpenAIRE

    Holstein, Norbert; Tamer, Sarah el; Weigend, Maximilian

    2018-01-01

    Hazelnuts (Corylus L.) are the source of one of the globally most important nut crops. Despite their economic and cultural importance, taxonomic knowledge is poor, even the number of species is equivocal. Weak morphological differentiation, the inconsistent taxonomic treatment of horticultural selections and cultivars, and uncritical regional treatments generated a multitude of names. The situation is further complicated by an ancient history of use (at least 10 400 years), trade (at least 40...

  20. Integrated societal risk assessment framework for nuclear power and renewable energy sources

    International Nuclear Information System (INIS)

    Lee, Sang Hun; Kang, Hyun Gook

    2015-01-01

    Recently, the estimation of the social cost of energy sources has been emphasized as various novel energy options become feasible in addition to conventional ones. In particular, the social cost of introducing measures to protect power-distribution systems from power-source instability and the cost of accident-risk response for various power sources must be investigated. To account for these risk factors, an integrated societal risk assessment framework, based on power-uncertainty analysis and accident-consequence analysis, is proposed. In this study, we applied the proposed framework to nuclear power plants, solar photovoltaic systems, and wind-turbine generators. The required capacity of gas-turbine power plants to be used as backup power facilities to compensate for fluctuations in the power output from the main power source was estimated based on the performance indicators of each power source. The average individual health risk per terawatt-hours (TWh) of electricity produced by each power source was quantitatively estimated by assessing accident frequency and the consequences of specific accident scenarios based on the probabilistic risk assessment methodology. This study is expected to provide insight into integrated societal risk analysis, and can be used to estimate the social cost of various power sources

  1. Integrated societal risk assessment framework for nuclear power and renewable energy sources

    Directory of Open Access Journals (Sweden)

    Sang Hun Lee

    2015-06-01

    Full Text Available Recently, the estimation of the social cost of energy sources has been emphasized as various novel energy options become feasible in addition to conventional ones. In particular, the social cost of introducing measures to protect power-distribution systems from power-source instability and the cost of accident-risk response for various power sources must be investigated. To account for these risk factors, an integrated societal risk assessment framework, based on power-uncertainty analysis and accident-consequence analysis, is proposed. In this study, we applied the proposed framework to nuclear power plants, solar photovoltaic systems, and wind-turbine generators. The required capacity of gas-turbine power plants to be used as backup power facilities to compensate for fluctuations in the power output from the main power source was estimated based on the performance indicators of each power source. The average individual health risk per terawatt-hours (TWh of electricity produced by each power source was quantitatively estimated by assessing accident frequency and the consequences of specific accident scenarios based on the probabilistic risk assessment methodology. This study is expected to provide insight into integrated societal risk analysis, and can be used to estimate the social cost of various power sources.

  2. Integrated societal risk assessment framework for nuclear power and renewable energy sources

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Sang Hun; Kang, Hyun Gook [Dept. of Nuclear and Quantum Engineering, KAIST, Daejeon (Korea, Republic of)

    2015-06-15

    Recently, the estimation of the social cost of energy sources has been emphasized as various novel energy options become feasible in addition to conventional ones. In particular, the social cost of introducing measures to protect power-distribution systems from power-source instability and the cost of accident-risk response for various power sources must be investigated. To account for these risk factors, an integrated societal risk assessment framework, based on power-uncertainty analysis and accident-consequence analysis, is proposed. In this study, we applied the proposed framework to nuclear power plants, solar photovoltaic systems, and wind-turbine generators. The required capacity of gas-turbine power plants to be used as backup power facilities to compensate for fluctuations in the power output from the main power source was estimated based on the performance indicators of each power source. The average individual health risk per terawatt-hours (TWh) of electricity produced by each power source was quantitatively estimated by assessing accident frequency and the consequences of specific accident scenarios based on the probabilistic risk assessment methodology. This study is expected to provide insight into integrated societal risk analysis, and can be used to estimate the social cost of various power sources.

  3. On the Prospects and Concerns of Integrating Open Source Software Environment in Software Engineering Education

    Science.gov (United States)

    Kamthan, Pankaj

    2007-01-01

    Open Source Software (OSS) has introduced a new dimension in software community. As the development and use of OSS becomes prominent, the question of its integration in education arises. In this paper, the following practices fundamental to projects and processes in software engineering are examined from an OSS perspective: project management;…

  4. A CMOS microdisplay with integrated controller utilizing improved silicon hot carrier luminescent light sources

    Science.gov (United States)

    Venter, Petrus J.; Alberts, Antonie C.; du Plessis, Monuko; Joubert, Trudi-Heleen; Goosen, Marius E.; Janse van Rensburg, Christo; Rademeyer, Pieter; Fauré, Nicolaas M.

    2013-03-01

    Microdisplay technology, the miniaturization and integration of small displays for various applications, is predominantly based on OLED and LCoS technologies. Silicon light emission from hot carrier electroluminescence has been shown to emit light visibly perceptible without the aid of any additional intensification, although the electrical to optical conversion efficiency is not as high as the technologies mentioned above. For some applications, this drawback may be traded off against the major cost advantage and superior integration opportunities offered by CMOS microdisplays using integrated silicon light sources. This work introduces an improved version of our previously published microdisplay by making use of new efficiency enhanced CMOS light emitting structures and an increased display resolution. Silicon hot carrier luminescence is often created when reverse biased pn-junctions enter the breakdown regime where impact ionization results in carrier transport across the junction. Avalanche breakdown is typically unwanted in modern CMOS processes. Design rules and process design are generally tailored to prevent breakdown, while the voltages associated with breakdown are too high to directly interact with the rest of the CMOS standard library. This work shows that it is possible to lower the operating voltage of CMOS light sources without compromising the optical output power. This results in more efficient light sources with improved interaction with other standard library components. This work proves that it is possible to create a reasonably high resolution microdisplay while integrating the active matrix controller and drivers on the same integrated circuit die without additional modifications, in a standard CMOS process.

  5. Taxonomic names, metadata, and the Semantic Web

    Directory of Open Access Journals (Sweden)

    Roderic D. M. Page

    2006-01-01

    Full Text Available Life Science Identifiers (LSIDs offer an attractive solution to the problem of globally unique identifiers for digital objects in biology. However, I suggest that in the context of taxonomic names, the most compelling benefit of adopting these identifiers comes from the metadata associated with each LSID. By using existing vocabularies wherever possible, and using a simple vocabulary for taxonomy-specific concepts we can quickly capture the essential information about a taxonomic name in the Resource Description Framework (RDF format. This opens up the prospect of using technologies developed for the Semantic Web to add ``taxonomic intelligence" to biodiversity databases. This essay explores some of these ideas in the context of providing a taxonomic framework for the phylogenetic database TreeBASE.

  6. Integrating open-source software applications to build molecular dynamics systems.

    Science.gov (United States)

    Allen, Bruce M; Predecki, Paul K; Kumosa, Maciej

    2014-04-05

    Three open-source applications, NanoEngineer-1, packmol, and mis2lmp are integrated using an open-source file format to quickly create molecular dynamics (MD) cells for simulation. The three software applications collectively make up the open-source software (OSS) suite known as MD Studio (MDS). The software is validated through software engineering practices and is verified through simulation of the diglycidyl ether of bisphenol-a and isophorone diamine (DGEBA/IPD) system. Multiple simulations are run using the MDS software to create MD cells, and the data generated are used to calculate density, bulk modulus, and glass transition temperature of the DGEBA/IPD system. Simulation results compare well with published experimental and numerical results. The MDS software prototype confirms that OSS applications can be analyzed against real-world research requirements and integrated to create a new capability. Copyright © 2014 Wiley Periodicals, Inc.

  7. Two new integrable couplings of the soliton hierarchies with self-consistent sources

    International Nuclear Information System (INIS)

    Tie-Cheng, Xia

    2010-01-01

    A kind of integrable coupling of soliton equations hierarchy with self-consistent sources associated with s-tilde l(4) has been presented (Yu F J and Li L 2009 Appl. Math. Comput. 207 171; Yu F J 2008 Phys. Lett. A 372 6613). Based on this method, we construct two integrable couplings of the soliton hierarchy with self-consistent sources by using the loop algebra s-tilde l(4). In this paper, we also point out that there are some errors in these references and we have corrected these errors and set up new formula. The method can be generalized to other soliton hierarchy with self-consistent sources. (general)

  8. A calderón-preconditioned single source combined field integral equation for analyzing scattering from homogeneous penetrable objects

    KAUST Repository

    Valdé s, Felipe; Andriulli, Francesco P.; Bagci, Hakan; Michielssen, Eric

    2011-01-01

    A new regularized single source equation for analyzing scattering from homogeneous penetrable objects is presented. The proposed equation is a linear combination of a Calderón-preconditioned single source electric field integral equation and a

  9. Golden Ratio Versus Pi as Random Sequence Sources for Monte Carlo Integration

    Science.gov (United States)

    Sen, S. K.; Agarwal, Ravi P.; Shaykhian, Gholam Ali

    2007-01-01

    We discuss here the relative merits of these numbers as possible random sequence sources. The quality of these sequences is not judged directly based on the outcome of all known tests for the randomness of a sequence. Instead, it is determined implicitly by the accuracy of the Monte Carlo integration in a statistical sense. Since our main motive of using a random sequence is to solve real world problems, it is more desirable if we compare the quality of the sequences based on their performances for these problems in terms of quality/accuracy of the output. We also compare these sources against those generated by a popular pseudo-random generator, viz., the Matlab rand and the quasi-random generator ha/ton both in terms of error and time complexity. Our study demonstrates that consecutive blocks of digits of each of these numbers produce a good random sequence source. It is observed that randomly chosen blocks of digits do not have any remarkable advantage over consecutive blocks for the accuracy of the Monte Carlo integration. Also, it reveals that pi is a better source of a random sequence than theta when the accuracy of the integration is concerned.

  10. Evaluation and selection of open-source EMR software packages based on integrated AHP and TOPSIS.

    Science.gov (United States)

    Zaidan, A A; Zaidan, B B; Al-Haiqi, Ahmed; Kiah, M L M; Hussain, Muzammil; Abdulnabi, Mohamed

    2015-02-01

    Evaluating and selecting software packages that meet the requirements of an organization are difficult aspects of software engineering process. Selecting the wrong open-source EMR software package can be costly and may adversely affect business processes and functioning of the organization. This study aims to evaluate and select open-source EMR software packages based on multi-criteria decision-making. A hands-on study was performed and a set of open-source EMR software packages were implemented locally on separate virtual machines to examine the systems more closely. Several measures as evaluation basis were specified, and the systems were selected based a set of metric outcomes using Integrated Analytic Hierarchy Process (AHP) and TOPSIS. The experimental results showed that GNUmed and OpenEMR software can provide better basis on ranking score records than other open-source EMR software packages. Copyright © 2014 Elsevier Inc. All rights reserved.

  11. Laser-induced extreme UV radiation sources for manufacturing next-generation integrated circuits

    International Nuclear Information System (INIS)

    Borisov, V M; Vinokhodov, A Yu; Ivanov, A S; Kiryukhin, Yu B; Mishchenko, V A; Prokof'ev, A V; Khristoforov, O B

    2009-01-01

    The development of high-power discharge sources emitting in the 13.5±0.135-nm spectral band is of current interest because they are promising for applications in industrial EUV (extreme ultraviolet) lithography for manufacturing integrated circuits according to technological precision standards of 22 nm and smaller. The parameters of EUV sources based on a laser-induced discharge in tin vapours between rotating disc electrodes are investigated. The properties of the discharge initiation by laser radiation at different wavelengths are established and the laser pulse parameters providing the maximum energy characteristics of the EUV source are determined. The EUV source developed in the study emits an average power of 276 W in the 13.5±0.135-nm spectral band on conversion to the solid angle 2π sr in the stationary regime at a pulse repetition rate of 3000 Hz. (laser applications and other topics in quantum electronics)

  12. Low Power Consumption Wireless Sensor Communication System Integrated with an Energy Harvesting Power Source

    Directory of Open Access Journals (Sweden)

    Vlad MARSIC

    2013-01-01

    Full Text Available This paper presents the testing results of a wireless sensor communication system with low power consumption integrated with an energy harvesting power source. The experiments focus on the system’s capability to perform continuous monitoring and to wirelessly transmit the data acquired from the sensors to a user base station, for realization of completely battery-free wireless sensor system. Energy harvesting technologies together with system design optimization for power consumption minimization ensure the system’s energy autonomous capability demonstrated in this paper by presenting the promising testing results achieved following its integration with structural health monitoring and body area network applications.

  13. An integrated approach to assess heavy metal source apportionment in peri-urban agricultural soils.

    Science.gov (United States)

    Huang, Ying; Li, Tingqiang; Wu, Chengxian; He, Zhenli; Japenga, Jan; Deng, Meihua; Yang, Xiaoe

    2015-12-15

    Three techniques (Isotope Ratio Analysis, GIS mapping, and Multivariate Statistical Analysis) were integrated to assess heavy metal pollution and source apportionment in peri-urban agricultural soils. The soils in the study area were moderately polluted with cadmium (Cd) and mercury (Hg), lightly polluted with lead (Pb), and chromium (Cr). GIS Mapping suggested Cd pollution originates from point sources, whereas Hg, Pb, Cr could be traced back to both point and non-point sources. Principal component analysis (PCA) indicated aluminum (Al), manganese (Mn), nickel (Ni) were mainly inherited from natural sources, while Hg, Pb, and Cd were associated with two different kinds of anthropogenic sources. Cluster analysis (CA) further identified fertilizers, waste water, industrial solid wastes, road dust, and atmospheric deposition as potential sources. Based on isotope ratio analysis (IRA) organic fertilizers and road dusts accounted for 74-100% and 0-24% of the total Hg input, while road dusts and solid wastes contributed for 0-80% and 19-100% of the Pb input. This study provides a reliable approach for heavy metal source apportionment in this particular peri-urban area, with a clear potential for future application in other regions. Copyright © 2015 Elsevier B.V. All rights reserved.

  14. Open source information acquisition, analysis and integration in the IAEA Department of Safeguards

    Energy Technology Data Exchange (ETDEWEB)

    Barletta, M.; Zarimpas, N.; Zarucki, R., E-mail: M.Barletta@iaea.or [IAEA, Wagramerstrasse 5, P.O. Box 100, 1400 Vienna (Austria)

    2010-10-15

    Acquisition and analysis of open source information plays an increasingly important role in the IAEA strengthened safeguards system. The Agency's focal point for open source information collection and analysis is the Division of Safeguards Information Management (SGIM) within the IAEA Department of Safeguards. In parallel with the approval of the Model Additional Protocol in 1997, a new centre of information acquisition and analysis expertise was created within SGIM. By acquiring software, developing databases, retraining existing staff and hiring new staff with diverse analytical skills, SGIM is pro actively contributing to the future implementation of information-driven safeguards in collaboration with other Divisions within the Department of Safeguards. Open source information support is now fully integrated with core safeguards processes and activities, and has become an effective tool in the work of the Department of Safeguards. This provides and overview of progress realized through the acquisition and use of open source information in several thematic areas: evaluation of additional protocol declarations; support to the State Evaluation process; in-depth investigation of safeguards issues, including assisting inspections and complementary access; research on illicit nuclear procurement networks and trafficking; and monitoring nuclear developments. Demands for open source information have steadily grown and are likely to continue to grow in the future. Coupled with the enormous growth and accessibility in the volume and sources of information, new challenges are presented, both technical and analytical. This paper discusses actions taken and future plans for multi-source and multi-disciplinary analytic integration to strengthen confidence in safeguards conclusions - especially regarding the absence of undeclared nuclear materials and activities. (Author)

  15. Open source information acquisition, analysis and integration in the IAEA Department of Safeguards

    International Nuclear Information System (INIS)

    Barletta, M.; Zarimpas, N.; Zarucki, R.

    2010-10-01

    Acquisition and analysis of open source information plays an increasingly important role in the IAEA strengthened safeguards system. The Agency's focal point for open source information collection and analysis is the Division of Safeguards Information Management (SGIM) within the IAEA Department of Safeguards. In parallel with the approval of the Model Additional Protocol in 1997, a new centre of information acquisition and analysis expertise was created within SGIM. By acquiring software, developing databases, retraining existing staff and hiring new staff with diverse analytical skills, SGIM is pro actively contributing to the future implementation of information-driven safeguards in collaboration with other Divisions within the Department of Safeguards. Open source information support is now fully integrated with core safeguards processes and activities, and has become an effective tool in the work of the Department of Safeguards. This provides and overview of progress realized through the acquisition and use of open source information in several thematic areas: evaluation of additional protocol declarations; support to the State Evaluation process; in-depth investigation of safeguards issues, including assisting inspections and complementary access; research on illicit nuclear procurement networks and trafficking; and monitoring nuclear developments. Demands for open source information have steadily grown and are likely to continue to grow in the future. Coupled with the enormous growth and accessibility in the volume and sources of information, new challenges are presented, both technical and analytical. This paper discusses actions taken and future plans for multi-source and multi-disciplinary analytic integration to strengthen confidence in safeguards conclusions - especially regarding the absence of undeclared nuclear materials and activities. (Author)

  16. Low Power Consumption Wireless Sensor Communication System Integrated with an Energy Harvesting Power Source

    OpenAIRE

    Vlad MARSIC; Alessandro GIULIANO; Meiling ZHU

    2013-01-01

    This paper presents the testing results of a wireless sensor communication system with low power consumption integrated with an energy harvesting power source. The experiments focus on the system’s capability to perform continuous monitoring and to wirelessly transmit the data acquired from the sensors to a user base station, for realization of completely battery-free wireless sensor system. Energy harvesting technologies together with system design optimization for power consumption minimiza...

  17. An Integrated Inductor For Parallel Interleaved Three-Phase Voltage Source Converters

    DEFF Research Database (Denmark)

    Gohil, Ghanshyamsinh Vijaysinh; Bede, Lorand; Teodorescu, Remus

    2016-01-01

    Three phase Voltage Source Converters (VSCs) are often connected in parallel to realize high current output converter system. The harmonic quality of the resultant switched output voltage can be improved by interleaving the carrier signals of these parallel connected VSCs. As a result, the line...... of the state-of-the-art filtering solution. The performance of the integrated inductor is also verified by the experimental measurements....

  18. [Bibliometric analysis of literature regarding integrated schistosomiasis control strategy with emphasis on infectious source control].

    Science.gov (United States)

    Qian, Yi-Li; Wang, Wei; Hong, Qing-Biao; Liang, You-Sheng

    2014-12-01

    To evaluate the outcomes of implementation of integrated schistosomiasis control strategy with emphasis on infectious source control using a bibliometric method. The literature pertaining to integrated schistosomiasis control strategy with emphasis on infectious source control was retrieved from CNKI, Wanfangdata, VIP, PubMed, Web of Science, BIOSIS and Google Scholar, and a bibliometric analysis of literature captured was performed. During the period from January 1, 2004 through September 30, 2014, a total of 94 publications regarding integrated schistosomiasis control strategy with emphasis on infectious source control were captured, including 78 Chinese articles (82.98%) and 16 English papers (17.02%). The Chinese literature was published in 21 national journals, and Chinese Journal of Schistosomiasis Control had the largest number of publications, consisting of 37.23% of total publications; 16 English papers were published in 12 international journals, and PLoS Neglected Tropical Diseases had the largest number of publications (3 publications). There were 37 affiliations publishing these 94 articles, and National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (16 publications), Anhui Institute of Schistosomiasis Control (12 publications) and Hunan Institute of Schistosomiasis Control (9 publications) ranked top three affiliations in number of publications. A total of 157 persons were co-authored in these 94 publications, and Wang, Zhou and Zhang ranked top 3 authors in number of publications. The integrated schistosomiasis control strategy with emphasis on infectious source control has been widely implemented in China, and the achievements obtained from the implementation of this strategy should be summarized and transmitted internationally.

  19. Path-integral method for the source apportionment of photochemical pollutants

    Science.gov (United States)

    Dunker, A. M.

    2015-06-01

    A new, path-integral method is presented for apportioning the concentrations of pollutants predicted by a photochemical model to emissions from different sources. A novel feature of the method is that it can apportion the difference in a species concentration between two simulations. For example, the anthropogenic ozone increment, which is the difference between a simulation with all emissions present and another simulation with only the background (e.g., biogenic) emissions included, can be allocated to the anthropogenic emission sources. The method is based on an existing, exact mathematical equation. This equation is applied to relate the concentration difference between simulations to line or path integrals of first-order sensitivity coefficients. The sensitivities describe the effects of changing the emissions and are accurately calculated by the decoupled direct method. The path represents a continuous variation of emissions between the two simulations, and each path can be viewed as a separate emission-control strategy. The method does not require auxiliary assumptions, e.g., whether ozone formation is limited by the availability of volatile organic compounds (VOCs) or nitrogen oxides (NOx), and can be used for all the species predicted by the model. A simplified configuration of the Comprehensive Air Quality Model with Extensions (CAMx) is used to evaluate the accuracy of different numerical integration procedures and the dependence of the source contributions on the path. A Gauss-Legendre formula using three or four points along the path gives good accuracy for apportioning the anthropogenic increments of ozone, nitrogen dioxide, formaldehyde, and nitric acid. Source contributions to these increments were obtained for paths representing proportional control of all anthropogenic emissions together, control of NOx emissions before VOC emissions, and control of VOC emissions before NOx emissions. There are similarities in the source contributions from the

  20. Integrated nanohole array surface plasmon resonance sensing device using a dual-wavelength source

    International Nuclear Information System (INIS)

    Escobedo, C; Vincent, S; Choudhury, A I K; Campbell, J; Gordon, R; Brolo, A G; Sinton, D

    2011-01-01

    In this paper, we demonstrate a compact integrated nanohole array-based surface plasmon resonance sensing device. The unit includes a LED light source, driving circuitry, CCD detector, microfluidic network and computer interface, all assembled from readily available commercial components. A dual-wavelength LED scheme was implemented to increase spectral diversity and isolate intensity variations to be expected in the field. The prototype shows bulk sensitivity of 266 pixel intensity units/RIU and a limit of detection of 6 × 10 −4 RIU. Surface binding tests were performed, demonstrating functionality as a surface-based sensing system. This work is particularly relevant for low-cost point-of-care applications, especially those involving multiple tests and field studies. While nanohole arrays have been applied to many sensing applications, and their suitability to device integration is well established, this is the first demonstration of a fully integrated nanohole array-based sensing device.

  1. Current Taxonomical Situation of Streptococcus suis.

    Science.gov (United States)

    Okura, Masatoshi; Osaki, Makoto; Nomoto, Ryohei; Arai, Sakura; Osawa, Ro; Sekizaki, Tsutomu; Takamatsu, Daisuke

    2016-06-24

    Streptococcus suis, a major porcine pathogen and an important zoonotic agent, is considered to be composed of phenotypically and genetically diverse strains. However, recent studies reported several "S. suis-like strains" that were identified as S. suis by commonly used methods for the identification of this bacterium, but were regarded as distinct species from S. suis according to the standards of several taxonomic analyses. Furthermore, it has been suggested that some S. suis-like strains can be assigned to several novel species. In this review, we discuss the current taxonomical situation of S. suis with a focus on (1) the classification history of the taxon of S. suis; (2) S. suis-like strains revealed by taxonomic analyses; (3) methods for detecting and identifying this species, including a novel method that can distinguish S. suis isolates from S. suis-like strains; and (4) current topics on the reclassification of S. suis-like strains.

  2. Time-domain single-source integral equations for analyzing scattering from homogeneous penetrable objects

    KAUST Repository

    Valdés, Felipe

    2013-03-01

    Single-source time-domain electric-and magnetic-field integral equations for analyzing scattering from homogeneous penetrable objects are presented. Their temporal discretization is effected by using shifted piecewise polynomial temporal basis functions and a collocation testing procedure, thus allowing for a marching-on-in-time (MOT) solution scheme. Unlike dual-source formulations, single-source equations involve space-time domain operator products, for which spatial discretization techniques developed for standalone operators do not apply. Here, the spatial discretization of the single-source time-domain integral equations is achieved by using the high-order divergence-conforming basis functions developed by Graglia alongside the high-order divergence-and quasi curl-conforming (DQCC) basis functions of Valdés The combination of these two sets allows for a well-conditioned mapping from div-to curl-conforming function spaces that fully respects the space-mapping properties of the space-time operators involved. Numerical results corroborate the fact that the proposed procedure guarantees accuracy and stability of the MOT scheme. © 2012 IEEE.

  3. Integration and Optimization of Alternative Sources of Energy in a Remote Region

    Science.gov (United States)

    Berberi, Pellumb; Inodnorjani, Spiro; Aleti, Riza

    2010-01-01

    In a remote coastal region supply of energy from national grid is insufficient for a sustainable development. Integration and optimization of local alternative renewable energy sources is an optional solution of the problem. In this paper we have studied the energetic potential of local sources of renewable energy (water, solar, wind and biomass). A bottom-up energy system optimization model is proposed in order to support planning policies for promoting the use of renewable energy sources. A software, based on multiple factors and constrains analysis for optimization energy flow is proposed, which provides detailed information for exploitation each source of energy, power and heat generation, GHG emissions and end-use sectors. Economical analysis shows that with existing technologies both stand alone and regional facilities may be feasible. Improving specific legislation will foster investments from Central or Local Governments and also from individuals, private companies or small families. The study is carried on the frame work of a FP6 project "Integrated Renewable Energy System."

  4. Regulatory Oversight of Radioactive Sources through the Integrated Management of Safety and Security

    International Nuclear Information System (INIS)

    Horvath, K.

    2016-01-01

    The Hungarian Atomic Energy Authority (HAEA) has full regulatory competence; its mission is to oversee the safety and security of all the peaceful applications of atomic energy. All the radioactive sources having activity above the exemption level is registered and licensed both from safety and security points of view. The Hungarian central register of radioactive sources contains about 7,000 radioactive sources and 450 license holders. In order to use its limited resources the HAEA has decided to introduce an integrated regulatory oversight programme. Accordingly, during the licensing process and inspection activities the HAEA intends to assess both safety and security aspects at the same time. The article describes the Hungarian the various applications of radioactive materials, and summarizes the preparation activities of the HAEA. (author)

  5. A new hard X-ray source discovered by INTEGRAL: IGR J16442-554

    DEFF Research Database (Denmark)

    Bozzo, E.; Ferrigno, C.; Chenevez, Jérôme

    2009-01-01

    During a key program observation of the inner Galactic disc performed between 2009-08-30 14:04 and 2009-09-01 12:03 (UTC), a new source was discovered in the INTEGRAL/IBIS mosaic image. The best localization is RA: 251.088 DEC: -55.808, with a 90% error radius of 3.6 arcmin. The source, IGR J16442......-5548, is detected with a significance of 7 sigma in the 20-40 keV energy band and of 5 sigma in the 40-100 keV energy band. The corresponding flux is about 7 mCrab. The source is not detected in the JEM-X monitor: upper limits at 3 sigma c.l. are respectively 2 and 5 mCrab in the 3-10 keV and 10-25 keV energy bands...

  6. Integration of relational and textual biomedical sources. A pilot experiment using a semi-automated method for logical schema acquisition.

    Science.gov (United States)

    García-Remesal, M; Maojo, V; Billhardt, H; Crespo, J

    2010-01-01

    Bringing together structured and text-based sources is an exciting challenge for biomedical informaticians, since most relevant biomedical sources belong to one of these categories. In this paper we evaluate the feasibility of integrating relational and text-based biomedical sources using: i) an original logical schema acquisition method for textual databases developed by the authors, and ii) OntoFusion, a system originally designed by the authors for the integration of relational sources. We conducted an integration experiment involving a test set of seven differently structured sources covering the domain of genetic diseases. We used our logical schema acquisition method to generate schemas for all textual sources. The sources were integrated using the methods and tools provided by OntoFusion. The integration was validated using a test set of 500 queries. A panel of experts answered a questionnaire to evaluate i) the quality of the extracted schemas, ii) the query processing performance of the integrated set of sources, and iii) the relevance of the retrieved results. The results of the survey show that our method extracts coherent and representative logical schemas. Experts' feedback on the performance of the integrated system and the relevance of the retrieved results was also positive. Regarding the validation of the integration, the system successfully provided correct results for all queries in the test set. The results of the experiment suggest that text-based sources including a logical schema can be regarded as equivalent to structured databases. Using our method, previous research and existing tools designed for the integration of structured databases can be reused - possibly subject to minor modifications - to integrate differently structured sources.

  7. Unified method to integrate and blend several, potentially related, sources of information for genetic evaluation.

    Science.gov (United States)

    Vandenplas, Jérémie; Colinet, Frederic G; Gengler, Nicolas

    2014-09-30

    A condition to predict unbiased estimated breeding values by best linear unbiased prediction is to use simultaneously all available data. However, this condition is not often fully met. For example, in dairy cattle, internal (i.e. local) populations lead to evaluations based only on internal records while widely used foreign sires have been selected using internally unavailable external records. In such cases, internal genetic evaluations may be less accurate and biased. Because external records are unavailable, methods were developed to combine external information that summarizes these records, i.e. external estimated breeding values and associated reliabilities, with internal records to improve accuracy of internal genetic evaluations. Two issues of these methods concern double-counting of contributions due to relationships and due to records. These issues could be worse if external information came from several evaluations, at least partially based on the same records, and combined into a single internal evaluation. Based on a Bayesian approach, the aim of this research was to develop a unified method to integrate and blend simultaneously several sources of information into an internal genetic evaluation by avoiding double-counting of contributions due to relationships and due to records. This research resulted in equations that integrate and blend simultaneously several sources of information and avoid double-counting of contributions due to relationships and due to records. The performance of the developed equations was evaluated using simulated and real datasets. The results showed that the developed equations integrated and blended several sources of information well into a genetic evaluation. The developed equations also avoided double-counting of contributions due to relationships and due to records. Furthermore, because all available external sources of information were correctly propagated, relatives of external animals benefited from the integrated

  8. DStat: A Versatile, Open-Source Potentiostat for Electroanalysis and Integration.

    Directory of Open Access Journals (Sweden)

    Michael D M Dryden

    Full Text Available Most electroanalytical techniques require the precise control of the potentials in an electrochemical cell using a potentiostat. Commercial potentiostats function as "black boxes," giving limited information about their circuitry and behaviour which can make development of new measurement techniques and integration with other instruments challenging. Recently, a number of lab-built potentiostats have emerged with various design goals including low manufacturing cost and field-portability, but notably lacking is an accessible potentiostat designed for general lab use, focusing on measurement quality combined with ease of use and versatility. To fill this gap, we introduce DStat (http://microfluidics.utoronto.ca/dstat, an open-source, general-purpose potentiostat for use alone or integrated with other instruments. DStat offers picoampere current measurement capabilities, a compact USB-powered design, and user-friendly cross-platform software. DStat is easy and inexpensive to build, may be modified freely, and achieves good performance at low current levels not accessible to other lab-built instruments. In head-to-head tests, DStat's voltammetric measurements are much more sensitive than those of "CheapStat" (a popular open-source potentiostat described previously, and are comparable to those of a compact commercial "black box" potentiostat. Likewise, in head-to-head tests, DStat's potentiometric precision is similar to that of a commercial pH meter. Most importantly, the versatility of DStat was demonstrated through integration with the open-source DropBot digital microfluidics platform. In sum, we propose that DStat is a valuable contribution to the "open source" movement in analytical science, which is allowing users to adapt their tools to their experiments rather than alter their experiments to be compatible with their tools.

  9. DStat: A Versatile, Open-Source Potentiostat for Electroanalysis and Integration.

    Science.gov (United States)

    Dryden, Michael D M; Wheeler, Aaron R

    2015-01-01

    Most electroanalytical techniques require the precise control of the potentials in an electrochemical cell using a potentiostat. Commercial potentiostats function as "black boxes," giving limited information about their circuitry and behaviour which can make development of new measurement techniques and integration with other instruments challenging. Recently, a number of lab-built potentiostats have emerged with various design goals including low manufacturing cost and field-portability, but notably lacking is an accessible potentiostat designed for general lab use, focusing on measurement quality combined with ease of use and versatility. To fill this gap, we introduce DStat (http://microfluidics.utoronto.ca/dstat), an open-source, general-purpose potentiostat for use alone or integrated with other instruments. DStat offers picoampere current measurement capabilities, a compact USB-powered design, and user-friendly cross-platform software. DStat is easy and inexpensive to build, may be modified freely, and achieves good performance at low current levels not accessible to other lab-built instruments. In head-to-head tests, DStat's voltammetric measurements are much more sensitive than those of "CheapStat" (a popular open-source potentiostat described previously), and are comparable to those of a compact commercial "black box" potentiostat. Likewise, in head-to-head tests, DStat's potentiometric precision is similar to that of a commercial pH meter. Most importantly, the versatility of DStat was demonstrated through integration with the open-source DropBot digital microfluidics platform. In sum, we propose that DStat is a valuable contribution to the "open source" movement in analytical science, which is allowing users to adapt their tools to their experiments rather than alter their experiments to be compatible with their tools.

  10. Taxonomic research priorities for the conservation of the South African flora

    Directory of Open Access Journals (Sweden)

    Lize von Staden

    2013-04-01

    Full Text Available Taxonomic revisions, monographs and floras are the most important, and often the only source of data for assessing the extinction risk of plants, with recent revisions contributing to more accurate assessments. The recently completed Red List of South African plants involved an overview of the taxonomic literature pertaining to the South African flora, providing an opportunity to identify critical gaps in taxonomic coverage. In this study we identified taxonomic research priorities for effective conservation of South African plants. Priorities were identified at genus level, according to time since last revision, level of endemism, collecting effort, proportion of taxa included in revisions, and specimen identification confidence. Although the results indicate that 62% of the flora has been recently revised, revisionary taxonomic output has declined drastically, particularly in the past 10 years. This decline is a result of a decrease in revisionary productivity per taxonomist and not a result of a decline in the number of working taxonomists. The family Aizoaceae is the top priority for taxonomic research with 55% of taxa in need of revision, followed by Hyacinthaceae with 34% of taxa not yet revised. Ericaceae, Euphorbiaceae, Rutaceae, Malvaceae, Asteraceae and Acanthaceae are also priorities with over 30% of taxa last revised before 1970. We recommend the reinstatement of the Flora of Southern Africa project in an online format in order to centralise South Africa's existing taxonomic information and reinvigorate revisionary taxonomic study. This project will allow South Africa to fulfil its commitments to the Convention on Biodiversity by achieving Target 1 of the Global Strategy for Plant Conservation.

  11. Low-level radioactive waste source terms for the 1992 integrated data base

    International Nuclear Information System (INIS)

    Loghry, S.L.; Kibbey, A.H.; Godbee, H.W.; Icenhour, A.S.; DePaoli, S.M.

    1995-01-01

    This technical manual presents updated generic source terms (i.e., unitized amounts and radionuclide compositions) which have been developed for use in the Integrated Data Base (IDB) Program of the U.S. Department of Energy (DOE). These source terms were used in the IDB annual report, Integrated Data Base for 1992: Spent Fuel and Radioactive Waste Inventories, Projections, and Characteristics, DOE/RW-0006, Rev. 8, October 1992. They are useful as a basis for projecting future amounts (volume and radioactivity) of low-level radioactive waste (LLW) shipped for disposal at commercial burial grounds or sent for storage at DOE solid-waste sites. Commercial fuel cycle LLW categories include boiling-water reactor, pressurized-water reactor, fuel fabrication, and uranium hexafluoride (UF 6 ) conversion. Commercial nonfuel cycle LLW includes institutional/industrial (I/I) waste. The LLW from DOE operations is category as uranium/thorium fission product, induced activity, tritium, alpha, and open-quotes otherclose quotes. Fuel cycle commercial LLW source terms are normalized on the basis of net electrical output [MW(e)-year], except for UF 6 conversion, which is normalized on the basis of heavy metal requirement [metric tons of initial heavy metal ]. The nonfuel cycle commercial LLW source term is normalized on the basis of volume (cubic meters) and radioactivity (curies) for each subclass within the I/I category. The DOE LLW is normalized in a manner similar to that for commercial I/I waste. The revised source terms are based on the best available historical data through 1992

  12. The effect of source-axis distance on integral dose: implications for IMRT

    International Nuclear Information System (INIS)

    Keall, P.

    2001-01-01

    The source-axis distance (SAD) is a treatment machine design parameter that affects integral dose, dose rate and patient clearance. The aim of this work was to investigate the effect of source-axis distance on integral dose for conformal arc therapy. This work is part of a larger project to determine the ideal characteristics of a dedicated IMRT machine. The sensitivity of SAD to beam energy, PTV size, body size and PTV position were determined for conformal arc therapy. For the calculations performed here it was assumed that dose equals terma. The integral dose ratio (IDR) was used to quantify the calculation results. It was found that the IDR increases as both SAD and photon energy increase, though the dependence of IDR on SAD decreases as energy increases. The PTV size was found to have a negligible effect on the relationship between the SAD and IDR, however the body size does affect the relationship between the SAD and IDR. The position of the PTV within the body also affects the IDR. From dosimetric considerations alone, the larger the SAD, the better the possible dose distribution. The IDR for a very large SAD is increased by approximately 5% when compared with the IDR for 100 cm SAD. Similarly, the IDR for 100 cm SAD is approximately 5% higher than the IDR at 50 cm SAD. Copyright (2001) Australasian College of Physical Scientists and Engineers in Medicine

  13. Integration of renew able energy sources in smart grid: a review

    International Nuclear Information System (INIS)

    Zafar, S.; Nawaz, K.; Naqvi, S.A.R.; Malik, T.N.

    2013-01-01

    The increasing complexity of the existing power grid due to rapid population growth, development in technology, infrastructure and computational tools are the factors that contribute to the need of deployment of smart grid for secure and efficient use of electrical energy. The modernization of electric grids toward a smart grid is being carried out to improve reliability, facilitate integration of renewable energies, and improve power consumption management. Due to continuous depletion of primary fuel resources and global concern about the environmental pollution, the development of smart grids based on renewable energy resources has gained huge strategic significance now a days to resolve the energy crisis. However the intermittent and fluctuating nature of these sources makes the integration a difficult task that needs to be effectively addressed. Firstly this paper briefly discuss the emerging renewable energy resources (RERs) and Energy storage systems (EES). Secondly this work comprehensively reviews the potential challenges in integration of these sources in smart grid along with the applied control strategies for their facilitation and some practical case studies. (author)

  14. Regional Integrated Tenets to Reinforce the Safety and Security of Radioactive Sources (ClearZone)

    International Nuclear Information System (INIS)

    Salzer, P.

    2003-01-01

    The EURATOM Research and Training Programme on Nuclear Energy includes 2 main fields - fusion energy research and management of radioactive waste, radiation protection and other activities of nuclear technology and safety.Seven instruments (mechanisms) for projects management are used - 'Network of Excellence' (NOE); 'Integrated Project' (IP); 'Specific Targeted Research Project' or 'Specific Targeted Training Project' (STREP); 'Co-ordination Action' (CA); Actions to Promote and Develop Human Resources and Mobility Specific Support Actions; Integrated Infrastructure Initiatives. Two consecutive sub-projects are proposed: 'small' - countries of the Visegrad four + Austrian participant -within the 6th FP 'Specific Supported Actions' and 'large' - participation of more countries in the region - more oriented to practical implementation of the 'small' project findings - intention to use the 6th Framework Programme resources to co-financing the implementation activities. The main objectives are: to create effective lines of defense (prevention -detection - categorization - transport - storage) against malicious use of radioactive sources; to achieve and maintain a high level of safety and security of radioactive sources; to arise the radioactive sources management safety and security culture at the Central European region. Consortium of 11 organisations from Czech Republic, Slovak Republic, Austria, Hungary and Poland is established for the Project implementation. The Project task are grouped in the following areas: legislation, infrastructure, practices; metallurgical industry, cross border control; instrumentation and metrology; information system

  15. A taxonomic revision of Lamium (Lamiaceae)

    NARCIS (Netherlands)

    Mennema, J.

    1989-01-01

    The present study deals with the systematics and taxonomy of the genus Lamium (Lamiaceae). The taxonomic revision is mainly based on the study of herbarium collections, and to a smaller degree on field observations and abstracts from literature. The research was done at the Rijksherbarium, Leyden,

  16. Seasonality, distribution and taxonomic status of avian ...

    African Journals Online (AJOL)

    Description of a new species is based upon morphology of gametocyte development in the peripheral blood of the avian host. This does not distinguish between morphologically identical gametocytes from different avian host families, nor is species or family level a valid taxonomic character. Thus, Haemoproteus and ...

  17. Taxonomic Challenges and Distribution of Gracilarioid Algae ...

    African Journals Online (AJOL)

    This paper reviews the taxonomical literature of the gracilarioid algae from Tanzania, and provides information about their ecology and distribution based on an intensive regime of local collection. Its aim was to provide names, even if on a preliminary basis, for local gracilarioid taxa. Our revision shows that species ...

  18. Taxonomic novelties in African Dracaena (Dracaenaceae)

    NARCIS (Netherlands)

    Damen, T.H.J.; Burg, van der W.J.; Wiland-Szymańska, J.; Sosef, M.S.M.

    2018-01-01

    In preparing the treatment of Dracaena for Flore du Gabon and Flore d’Afrique centrale, a relatively high number of taxonomic and nomenclatural novelties were discovered; these are presented here. Within Dracaena five species and one forma are described as new, D. bushii, D. haemanthoides, D.

  19. Polyphasic taxonomic characterization of lactic acid bacteria ...

    African Journals Online (AJOL)

    The results of these analyses showed that ting fermentation involved at least three different species of LAB, i.e. Lactobacillus fermentum, L. plantarum and L. rhamnosus. To our knowledge, this is the first report of polyphasic taxonomic characterization of LAB from this food. This research forms an essential first step towards ...

  20. Integrating Multiple Data Sources for Combinatorial Marker Discovery: A Study in Tumorigenesis.

    Science.gov (United States)

    Bandyopadhyay, Sanghamitra; Mallik, Saurav

    2018-01-01

    Identification of combinatorial markers from multiple data sources is a challenging task in bioinformatics. Here, we propose a novel computational framework for identifying significant combinatorial markers ( s) using both gene expression and methylation data. The gene expression and methylation data are integrated into a single continuous data as well as a (post-discretized) boolean data based on their intrinsic (i.e., inverse) relationship. A novel combined score of methylation and expression data (viz., ) is introduced which is computed on the integrated continuous data for identifying initial non-redundant set of genes. Thereafter, (maximal) frequent closed homogeneous genesets are identified using a well-known biclustering algorithm applied on the integrated boolean data of the determined non-redundant set of genes. A novel sample-based weighted support ( ) is then proposed that is consecutively calculated on the integrated boolean data of the determined non-redundant set of genes in order to identify the non-redundant significant genesets. The top few resulting genesets are identified as potential s. Since our proposed method generates a smaller number of significant non-redundant genesets than those by other popular methods, the method is much faster than the others. Application of the proposed technique on an expression and a methylation data for Uterine tumor or Prostate Carcinoma produces a set of significant combination of markers. We expect that such a combination of markers will produce lower false positives than individual markers.

  1. HPCAT: an integrated high-pressure synchrotron facility at the Advanced Photon Source

    International Nuclear Information System (INIS)

    Shen, Guoyin; Chow, Paul; Xiao, Yuming; Sinogeikin, Stanislav; Meng, Yue; Yang, Wenge; Liermann, Hans-Peter; Shebanova, Olga; Rod, Eric; Bommannavar, Arunkumar; Mao, Ho-Kwang

    2008-01-01

    The high pressure collaborative access team (HPCAT) was established to advance cutting edge, multidisciplinary, high-pressure (HP) science and technology using synchrotron radiation at sector 16 of the Advanced Photon Source of Argonne National Laboratory. The integrated HPCAT facility has established four operating beamlines in nine hutches. Two beamlines are split in energy space from the insertion device (16ID) line, whereas the other two are spatially divided into two fans from the bending magnet (16BM) line. An array of novel X-ray diffraction and spectroscopic techniques has been integrated with HP and extreme temperature instrumentation at HPCAT. With a multidisciplinary approach and multi-institution collaborations, the HP program at the HPCAT has been enabling myriad scientific breakthroughs in HP physics, chemistry, materials, and Earth and planetary sciences.

  2. An Image Matching Algorithm Integrating Global SRTM and Image Segmentation for Multi-Source Satellite Imagery

    Directory of Open Access Journals (Sweden)

    Xiao Ling

    2016-08-01

    Full Text Available This paper presents a novel image matching method for multi-source satellite images, which integrates global Shuttle Radar Topography Mission (SRTM data and image segmentation to achieve robust and numerous correspondences. This method first generates the epipolar lines as a geometric constraint assisted by global SRTM data, after which the seed points are selected and matched. To produce more reliable matching results, a region segmentation-based matching propagation is proposed in this paper, whereby the region segmentations are extracted by image segmentation and are considered to be a spatial constraint. Moreover, a similarity measure integrating Distance, Angle and Normalized Cross-Correlation (DANCC, which considers geometric similarity and radiometric similarity, is introduced to find the optimal correspondences. Experiments using typical satellite images acquired from Resources Satellite-3 (ZY-3, Mapping Satellite-1, SPOT-5 and Google Earth demonstrated that the proposed method is able to produce reliable and accurate matching results.

  3. A Practice Approach of Multi-source Geospatial Data Integration for Web-based Geoinformation Services

    Science.gov (United States)

    Huang, W.; Jiang, J.; Zha, Z.; Zhang, H.; Wang, C.; Zhang, J.

    2014-04-01

    Geospatial data resources are the foundation of the construction of geo portal which is designed to provide online geoinformation services for the government, enterprise and public. It is vital to keep geospatial data fresh, accurate and comprehensive in order to satisfy the requirements of application and development of geographic location, route navigation, geo search and so on. One of the major problems we are facing is data acquisition. For us, integrating multi-sources geospatial data is the mainly means of data acquisition. This paper introduced a practice integration approach of multi-source geospatial data with different data model, structure and format, which provided the construction of National Geospatial Information Service Platform of China (NGISP) with effective technical supports. NGISP is the China's official geo portal which provides online geoinformation services based on internet, e-government network and classified network. Within the NGISP architecture, there are three kinds of nodes: national, provincial and municipal. Therefore, the geospatial data is from these nodes and the different datasets are heterogeneous. According to the results of analysis of the heterogeneous datasets, the first thing we do is to define the basic principles of data fusion, including following aspects: 1. location precision; 2.geometric representation; 3. up-to-date state; 4. attribute values; and 5. spatial relationship. Then the technical procedure is researched and the method that used to process different categories of features such as road, railway, boundary, river, settlement and building is proposed based on the principles. A case study in Jiangsu province demonstrated the applicability of the principle, procedure and method of multi-source geospatial data integration.

  4. CDApps: integrated software for experimental planning and data processing at beamline B23, Diamond Light Source.

    Science.gov (United States)

    Hussain, Rohanah; Benning, Kristian; Javorfi, Tamas; Longo, Edoardo; Rudd, Timothy R; Pulford, Bill; Siligardi, Giuliano

    2015-03-01

    The B23 Circular Dichroism beamline at Diamond Light Source has been operational since 2009 and has seen visits from more than 200 user groups, who have generated large amounts of data. Based on the experience of overseeing the users' progress at B23, four key areas requiring the most assistance are identified: planning of experiments and note-keeping; designing titration experiments; processing and analysis of the collected data; and production of experimental reports. To streamline these processes an integrated software package has been developed and made available for the users. The subsequent article summarizes the main features of the software.

  5. Comparative analyses of seven technologies to facilitate the integration of fluctuating renewable energy sources

    DEFF Research Database (Denmark)

    Mathiesen, Brian Vad; Lund, Henrik

    2009-01-01

    An analysis of seven different technologies is presented. The technologies integrate fluctuating renewable energy sources (RES) such as wind power production into the electricity supply, and the Danish energy system is used as a case. Comprehensive hour-by-hour energy system analyses are conducted...... of a complete system meeting electricity, heat and transport demands, and including RES, power plants, and combined heat and power production (CHP) for district heating and transport technologies. In conclusion, the most fuel-efficient and least-cost technologies are identified through energy system...

  6. Investigating The Integral Control Rod Worth Of The Miniature Neutron Source Reactor MNSR

    International Nuclear Information System (INIS)

    Nguyen Hoang Hai; Do Quang Binh

    2011-01-01

    Determining control rod characteristics is an essential problem of nuclear reactor analysis. In this research, the integral control rod worth of the miniature neutron source reactor MNSR is investigated. Some other parameters of the nuclear reactor, such as core excess reactivity, shut down margin, are also calculated. Group constants for all reactor components are generated by the WIMSD code and then are used in the CITATION code to solve the neutron diffusion equations. The maximum relative error of the calculated results compared with the measurement data is about 3.5%. (author)

  7. System and method for integrating and accessing multiple data sources within a data warehouse architecture

    Science.gov (United States)

    Musick, Charles R [Castro Valley, CA; Critchlow, Terence [Livermore, CA; Ganesh, Madhaven [San Jose, CA; Slezak, Tom [Livermore, CA; Fidelis, Krzysztof [Brentwood, CA

    2006-12-19

    A system and method is disclosed for integrating and accessing multiple data sources within a data warehouse architecture. The metadata formed by the present method provide a way to declaratively present domain specific knowledge, obtained by analyzing data sources, in a consistent and useable way. Four types of information are represented by the metadata: abstract concepts, databases, transformations and mappings. A mediator generator automatically generates data management computer code based on the metadata. The resulting code defines a translation library and a mediator class. The translation library provides a data representation for domain specific knowledge represented in a data warehouse, including "get" and "set" methods for attributes that call transformation methods and derive a value of an attribute if it is missing. The mediator class defines methods that take "distinguished" high-level objects as input and traverse their data structures and enter information into the data warehouse.

  8. DNA - An integrated open-source optimization platform for thermo-fluid systems

    DEFF Research Database (Denmark)

    Pierobon, Leonardo; Wronski, Jorrit; Elmegaard, Brian

    2014-01-01

    This paper presents developments and new features added to the simulation tool Dynamic Network Analysis. This open-source software is the result of ongoing development at the Department of Mechanical Engineering, Technical University of Denmark since 1988. Ever since, it has been employed to model...... to extend the capabilities of the software, while at the same time decreasing computational time. Dynamic Network Analysis can now solve non-convex optimization problems by virtue of the fully-embedded genetic algorithm. Moreover, the thermophysical fluid property library has been extended with more than...... 110 fluids by interfacing CoolProp, a high-accuracy open-source property package for pure and pseudo-pure fluids, as well as humid air. Furthermore, the use as time integrator for other tools is demonstrated. The new features are unveiled in two case studies. The first example covers the optimization...

  9. Microcontroller based implementation of fuel cell and battery integrated hybrid power source

    International Nuclear Information System (INIS)

    Fahad, A.; Ali, S.M.; Bhatti, A.A.; Nasir, M

    2013-01-01

    This paper presents the implementation of a digitally controlled hybrid power source system, composed of fuel cell and battery. Use of individual fuel cell stacks as a power source, encounters many problems in achieving the desired load characteristics. A battery integrated, digitally controlled hybrid system is proposed for high pulse requirements. The proposed hybrid power source fulfils these peak demands with efficient flow of energy as compared to individual operations of fuel cell or battery system. A dc/dc converter is applied which provides an optimal control of power flow among fuel cell, battery and load. The proposed system efficiently overcomes the electrochemical constraints like over current, battery leakage current, and over and under voltage dips. By formulation of an intelligent algorithm and incorporating a digital technology (AVR Microcontroller), an efficient control is achieved over fuel cell current limit, battery charge, voltage and current. The hybrid power source is tested and analyzed by carrying out simulations using MATLAB simulink. Along with the attainment of desired complex load profiles, the proposed design can also be used for power enhancement and optimization for different capacities. (author)

  10. Modeling the effects of integrating larval habitat source reduction and insecticide treated nets for malaria control.

    Directory of Open Access Journals (Sweden)

    Laith Yakob

    Full Text Available Integrated vector management for malaria control has received a lot of recent interest. Attacking multiple points in the transmission cycle is hoped to act synergistically and improve upon current single-tool interventions based on the use of insecticide-treated bed nets (ITNs. In the present study, we theoretically examined the application of larval habitat source reduction with ITNs in reducing malaria transmission. We selected this type of environmental management to complement ITNs because of a potential secondary mode of action that both control strategies share. In addition to increasing vector mortality, ITNs reduce the rate at which female mosquitoes locate human hosts for blood feeding, thereby extending their gonotrophic cycle. Similarly, while reducing adult vector emergence and abundance, source reduction of larval habitats may prolong the cycle duration by extending delays in locating oviposition sites. We found, however, that source reduction of larval habitats only operates through this secondary mode of action when habitat density is below a critical threshold. Hence, we illustrate how this strategy becomes increasingly effective when larval habitats are limited. We also demonstrate that habitat source reduction is better suited to human populations of higher density and in the presence of insecticide resistance or when the insecticidal properties of ITNs are depleted.

  11. Large scale integration of intermittent renewable energy sources in the Greek power sector

    International Nuclear Information System (INIS)

    Voumvoulakis, Emmanouil; Asimakopoulou, Georgia; Danchev, Svetoslav; Maniatis, George; Tsakanikas, Aggelos

    2012-01-01

    As a member of the European Union, Greece has committed to achieve ambitious targets for the penetration of renewable energy sources (RES) in gross electricity consumption by 2020. Large scale integration of RES requires a suitable mixture of compatible generation units, in order to deal with the intermittency of wind velocity and solar irradiation. The scope of this paper is to examine the impact of large scale integration of intermittent energy sources, required to meet the 2020 RES target, on the generation expansion plan, the fuel mix and the spinning reserve requirements of the Greek electricity system. We perform hourly simulation of the intermittent RES generation to estimate residual load curves on a monthly basis, which are then inputted in a WASP-IV model of the Greek power system. We find that the decarbonisation effort, with the rapid entry of RES and the abolishment of the grandfathering of CO 2 allowances, will radically transform the Greek electricity sector over the next 10 years, which has wide-reaching policy implications. - Highlights: ► Greece needs 8.8 to 9.3 GW additional RES installations by 2020. ► RES capacity credit varies between 12.2% and 15.3%, depending on interconnections. ► Without institutional changes, the reserve requirements will be more than double. ► New CCGT installed capacity will probably exceed the cost-efficient level. ► Competitive pressures should be introduced in segments other than day-ahead market.

  12. Development of an Air-Source Heat Pump Integrated with a Water Heating / Dehumidification Module

    Energy Technology Data Exchange (ETDEWEB)

    Rice, C Keith [ORNL; Uselton, Robert B. [Lennox Industries, Inc; Shen, Bo [ORNL; Baxter, Van D [ORNL; Shrestha, Som S [ORNL

    2014-01-01

    A residential-sized dual air-source integrated heat pump (AS-IHP) concept is under development in partnership between ORNL and a manufacturer. The concept design consists of a two-stage air-source heat pump (ASHP) coupled on the air distribution side with a separate novel water heating/dehumidification (WH/DH) module. The motivation for this unusual equipment combination is the forecast trend for home sensible loads to be reduced more than latent loads. Integration of water heating with a space dehumidification cycle addresses humidity control while performing double-duty. This approach can be applied to retrofit/upgrade applications as well as new construction. A WH/DH module capable of ~1.47 L/h water removal and ~2 kW water heating capacity was assembled by the manufacturer. A heat pump system model was used to guide the controls design; lab testing was conducted and used to calibrate the models. Performance maps were generated and used in a TRNSYS sub-hourly simulation to predict annual performance in a well-insulated house. Annual HVAC/WH energy savings of ~35% are predicted in cold and hot-humid U.S. climates compared to a minimum efficiency baseline.

  13. Air source integrated heat pump simulation model for EnergyPlus

    Energy Technology Data Exchange (ETDEWEB)

    Shen, Bo; New, Joshua; Baxter, Van

    2017-12-01

    An Air Source Integrated Heat Pump (AS-IHP) is an air source, multi-functional spacing conditioning unit with water heating function (WH), which can lead to great energy savings by recovering the condensing waste heat for domestic water heating. This paper summarizes development of the EnergyPlus AS-IHP model, introducing the physics, sub-models, working modes, and control logic. Based on the model, building energy simulations were conducted to demonstrate greater than 50% annual energy savings, in comparison to a baseline heat pump with electric water heater, over 10 US cities, using the EnergyPlus quick-service restaurant template building. We assessed water heating energy saving potentials using AS-IHP versus both gas and electric baseline systems, and pointed out climate zones where AS-IHPs are promising. In addition, a grid integration strategy was investigated to reveal further energy saving and electricity cost reduction potentials, via increasing the water heating set point temperature during off-peak hours and using larger water tanks.

  14. Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks.

    Science.gov (United States)

    Haibe-Kains, Benjamin; Olsen, Catharina; Djebbari, Amira; Bontempi, Gianluca; Correll, Mick; Bouton, Christopher; Quackenbush, John

    2012-01-01

    Genomics provided us with an unprecedented quantity of data on the genes that are activated or repressed in a wide range of phenotypes. We have increasingly come to recognize that defining the networks and pathways underlying these phenotypes requires both the integration of multiple data types and the development of advanced computational methods to infer relationships between the genes and to estimate the predictive power of the networks through which they interact. To address these issues we have developed Predictive Networks (PN), a flexible, open-source, web-based application and data services framework that enables the integration, navigation, visualization and analysis of gene interaction networks. The primary goal of PN is to allow biomedical researchers to evaluate experimentally derived gene lists in the context of large-scale gene interaction networks. The PN analytical pipeline involves two key steps. The first is the collection of a comprehensive set of known gene interactions derived from a variety of publicly available sources. The second is to use these 'known' interactions together with gene expression data to infer robust gene networks. The PN web application is accessible from http://predictivenetworks.org. The PN code base is freely available at https://sourceforge.net/projects/predictivenets/.

  15. Technical note: Efficient online source identification algorithm for integration within a contamination event management system

    Science.gov (United States)

    Deuerlein, Jochen; Meyer-Harries, Lea; Guth, Nicolai

    2017-07-01

    Drinking water distribution networks are part of critical infrastructures and are exposed to a number of different risks. One of them is the risk of unintended or deliberate contamination of the drinking water within the pipe network. Over the past decade research has focused on the development of new sensors that are able to detect malicious substances in the network and early warning systems for contamination. In addition to the optimal placement of sensors, the automatic identification of the source of a contamination is an important component of an early warning and event management system for security enhancement of water supply networks. Many publications deal with the algorithmic development; however, only little information exists about the integration within a comprehensive real-time event detection and management system. In the following the analytical solution and the software implementation of a real-time source identification module and its integration within a web-based event management system are described. The development was part of the SAFEWATER project, which was funded under FP 7 of the European Commission.

  16. PANDORA: keyword-based analysis of protein sets by integration of annotation sources.

    Science.gov (United States)

    Kaplan, Noam; Vaaknin, Avishay; Linial, Michal

    2003-10-01

    Recent advances in high-throughput methods and the application of computational tools for automatic classification of proteins have made it possible to carry out large-scale proteomic analyses. Biological analysis and interpretation of sets of proteins is a time-consuming undertaking carried out manually by experts. We have developed PANDORA (Protein ANnotation Diagram ORiented Analysis), a web-based tool that provides an automatic representation of the biological knowledge associated with any set of proteins. PANDORA uses a unique approach of keyword-based graphical analysis that focuses on detecting subsets of proteins that share unique biological properties and the intersections of such sets. PANDORA currently supports SwissProt keywords, NCBI Taxonomy, InterPro entries and the hierarchical classification terms from ENZYME, SCOP and GO databases. The integrated study of several annotation sources simultaneously allows a representation of biological relations of structure, function, cellular location, taxonomy, domains and motifs. PANDORA is also integrated into the ProtoNet system, thus allowing testing thousands of automatically generated clusters. We illustrate how PANDORA enhances the biological understanding of large, non-uniform sets of proteins originating from experimental and computational sources, without the need for prior biological knowledge on individual proteins.

  17. Integral migration and source term experiments on cement and bitumen waste forms

    International Nuclear Information System (INIS)

    Ewart, F.T.; Howse, R.M.; Sharpe, B.M.; Smith, A.J.; Thomason, H.P.; Williams, S.J.; Young, M.

    1986-01-01

    This is the final report of a programme of research which formed a part of the CEC joint research project into radionuclide migration in the geosphere (MIRAGE). This study addressed the aspects of integral migration and source term. The integral migration experiment simulated, in the laboratory, the intrusion of water into the repository, the leaching of radionuclides from two intermediate level wasteforms and the subsequent migration through the geosphere. The simulation consisted of a source of natural ground water which flowed over a sample of wasteform, at a controlled redox potential, and then through backfill and geological material packed in columns. The two wasteforms used here were cemented waste from the WAK plant at Karlsruhe, W. Germany and bitumenised intermediate concentrates from the Marcoule plant in France. The soluble fission products such as caesium wire rapidly released from the cemented waste but the actinides, and technetium in the reduced state, were retained in the wasteform. The release of all nuclides from the bitumenised waste was very low. (author)

  18. Integral migration and source-term experiments on cement and bitumen waste forms

    International Nuclear Information System (INIS)

    Ewart, F.T.; Howse, R.M.; Sharpe, B.M.; Smith, A.J.; Thomason, H.P.; Williams, S.J.; Young, M.

    1986-01-01

    This is the final report of a programme of research which formed a part of the CEC joint research project into radionuclide migration in the geosphere (MIRAGE). This study addressed the aspects of integral migration and source term. The integral migration experiment simulated, in the laboratory, the intrusion of water into the repository, the leaching of radionuclides from two intermediate-level waste-forms and the subsequent migration through the geosphere. The simulation consisted of a source of natural ground water which flowed over a sample of waste-form, at a controlled redox potential, and then through backfill and geological material packed in columns. The two waste forms used here were cemented waste from the WAK plant at Karlsruhe in the Federal Republic of Germany and bitumenized intermediate concentrates from the Marcoule plant in France. The soluble fission products such as caesium were rapidly released from the cemented waste but the actinides, and technetium in the reduced state, were retained in the waste-form. The released of all nuclides from the bitumenized waste was very low

  19. INVESTIGATING THE OPTICAL COUNTERPART CANDIDATES OF FOUR INTEGRAL SOURCES LOCALIZED WITH CHANDRA

    International Nuclear Information System (INIS)

    Özbey Arabacı, Mehtap; Kalemci, Emrah; Tomsick, John A.; Bodaghee, Arash; Halpern, Jules; Chaty, Sylvain; Rodriguez, Jerome; Rahoui, Farid

    2012-01-01

    We report on the optical spectroscopic follow-up observations of the candidate counterparts to four INTEGRAL sources: IGR J04069+5042, IGR J06552–1146, IGR J21188+4901, and IGR J22014+6034. The candidate counterparts were determined with Chandra, and the optical observations were performed with 1.5 m RTT-150 telescope (TÜBİTAK National Observatory, Antalya, Turkey) and 2.4 m Hiltner Telescope (MDM Observatory, Kitt Peak, Arizona). Our spectroscopic results show that one of the two candidates of IGR J04069+5042 and the one observed for IGR J06552–1146 could be active late-type stars in RS CVn systems. However, according to the likelihood analysis based on Chandra and INTEGRAL, two optically weaker sources in the INTEGRAL error circle of IGR J06552–1146 have higher probabilities to be the actual counterpart. The candidate counterparts of IGR J21188+4901 are classified as an active M-type star and a late-type star. Among the optical spectra of four candidates of IGR J22014+6034, two show Hα emission lines, one is a late-type star, and the other is an M type. The likelihood analysis favors a candidate with no distinguishing features in the optical spectrum. Two of the candidates classified as M-type dwarfs, are similar to some IGR candidates claimed to be symbiotic stars. However, some of the prominent features of symbiotic systems are missing in our spectra, and their NIR colors are not consistent with those expected for giants. We consider the IR colors of all IGR candidates claimed to be symbiotic systems and find that low-resolution optical spectrum may not be enough for conclusive identification.

  20. Integral tests of coupled multigroup neutron and gamma cross sections with fission and fusion sources

    International Nuclear Information System (INIS)

    Schriewer, J.; Hehn, G.; Mattes, M.; Pfister, G.; Keinert, J.

    1978-01-01

    Calculations were made for different benchmark experiments in order to test the coupled multigroup neutron and gamma library EURLIB-3 with 100 neutron groups and 20 gamma groups. In cooperation with EURATOM, Ispra, we produced this shielding library recently from ENDF/B-IV data for application in fission and fusion technology. Integral checks were performed for natural lithium, carbon, oxygen, and iron. Since iron is the most important structural material in nuclear technology, we started with calculations of iron benchmark experiments. Most of them are integral experiments of INR, Karlsruhe, but comparisons were also done with benchmark experiments from USA and Japan. For the experiments with fission sources we got satisfying results. All details of the resonances cannot be checked with flux measurements and multigroup cross sections used. But some averaged resonance behaviour of the measured and calculated fluxes can be compared and checked within the error limits given. We get greater differences in the calculations of benchmark experiments with 14 MeV neutron sources. For iron the group cross sections of EURLIB-3 produce an underestimation of the neutron flux in a broad energy region below the source energy. The conclusion is that the energy degradation by inelastic scattering is too strong. For fusion application the anisotropy of the inelastic scatter process must be taken into account, which isn't done by the processing codes at present. If this effect isn't enough, additional corrections have to be applied to the inelastic cross sections of iron in ENDF/B-IV. (author)

  1. Variance Component Selection With Applications to Microbiome Taxonomic Data

    Directory of Open Access Journals (Sweden)

    Jing Zhai

    2018-03-01

    Full Text Available High-throughput sequencing technology has enabled population-based studies of the role of the human microbiome in disease etiology and exposure response. Microbiome data are summarized as counts or composition of the bacterial taxa at different taxonomic levels. An important problem is to identify the bacterial taxa that are associated with a response. One method is to test the association of specific taxon with phenotypes in a linear mixed effect model, which incorporates phylogenetic information among bacterial communities. Another type of approaches consider all taxa in a joint model and achieves selection via penalization method, which ignores phylogenetic information. In this paper, we consider regression analysis by treating bacterial taxa at different level as multiple random effects. For each taxon, a kernel matrix is calculated based on distance measures in the phylogenetic tree and acts as one variance component in the joint model. Then taxonomic selection is achieved by the lasso (least absolute shrinkage and selection operator penalty on variance components. Our method integrates biological information into the variable selection problem and greatly improves selection accuracies. Simulation studies demonstrate the superiority of our methods versus existing methods, for example, group-lasso. Finally, we apply our method to a longitudinal microbiome study of Human Immunodeficiency Virus (HIV infected patients. We implement our method using the high performance computing language Julia. Software and detailed documentation are freely available at https://github.com/JingZhai63/VCselection.

  2. JBioWH: an open-source Java framework for bioinformatics data integration.

    Science.gov (United States)

    Vera, Roberto; Perez-Riverol, Yasset; Perez, Sonia; Ligeti, Balázs; Kertész-Farkas, Attila; Pongor, Sándor

    2013-01-01

    The Java BioWareHouse (JBioWH) project is an open-source platform-independent programming framework that allows a user to build his/her own integrated database from the most popular data sources. JBioWH can be used for intensive querying of multiple data sources and the creation of streamlined task-specific data sets on local PCs. JBioWH is based on a MySQL relational database scheme and includes JAVA API parser functions for retrieving data from 20 public databases (e.g. NCBI, KEGG, etc.). It also includes a client desktop application for (non-programmer) users to query data. In addition, JBioWH can be tailored for use in specific circumstances, including the handling of massive queries for high-throughput analyses or CPU intensive calculations. The framework is provided with complete documentation and application examples and it can be downloaded from the Project Web site at http://code.google.com/p/jbiowh. A MySQL server is available for demonstration purposes at hydrax.icgeb.trieste.it:3307. Database URL: http://code.google.com/p/jbiowh.

  3. Diagnostics of microdischarge-integrated plasma sources for display and materials processing

    International Nuclear Information System (INIS)

    Tachibana, K; Kishimoto, Y; Kawai, S; Sakaguchi, T; Sakai, O

    2005-01-01

    Two different types of microdischarge-integrated plasma sources have been operated at around the atmospheric pressure range. The discharge characteristics were diagnosed by optical emission spectroscopy (OES), laser absorption spectroscopy (LAS) and microwave transmission (MT) techniques. The dynamic spatiotemporal behaviour of excited atoms was analysed using OES and LAS and the temporal behaviour of the electron density was estimated using the MT method. In Ar and Xe/Ne gases, waveforms of the MT signal followed the current waveform in the rise period and lasted longer according to the recombination losses. However, in He the waveform followed the density of metastable atoms, reflecting the production of a large amount of electrons by the Penning ionization process with impurities. The estimated peak electron density in those plasma sources is of the order of 10 12 cm -3 , and the metastable atom density can reach 10 13 cm -3 . Thus, it is suggested that these sources can be potentially applied to convenient material processing tools of large area operated stably at atmospheric pressure

  4. JBioWH: an open-source Java framework for bioinformatics data integration

    Science.gov (United States)

    Vera, Roberto; Perez-Riverol, Yasset; Perez, Sonia; Ligeti, Balázs; Kertész-Farkas, Attila; Pongor, Sándor

    2013-01-01

    The Java BioWareHouse (JBioWH) project is an open-source platform-independent programming framework that allows a user to build his/her own integrated database from the most popular data sources. JBioWH can be used for intensive querying of multiple data sources and the creation of streamlined task-specific data sets on local PCs. JBioWH is based on a MySQL relational database scheme and includes JAVA API parser functions for retrieving data from 20 public databases (e.g. NCBI, KEGG, etc.). It also includes a client desktop application for (non-programmer) users to query data. In addition, JBioWH can be tailored for use in specific circumstances, including the handling of massive queries for high-throughput analyses or CPU intensive calculations. The framework is provided with complete documentation and application examples and it can be downloaded from the Project Web site at http://code.google.com/p/jbiowh. A MySQL server is available for demonstration purposes at hydrax.icgeb.trieste.it:3307. Database URL: http://code.google.com/p/jbiowh PMID:23846595

  5. Micro/Nano Fabricated Solid-State Thermoelectric Generator Devices for Integrated High Voltage Power Sources

    Science.gov (United States)

    Fleurial, J.-P.; Ryan, M. A.; Snyder, G. J.; Huang, C.-K.; Whitacre, J. F.; Patel, J.; Lim, J.; Borshchevsky, A.

    2002-01-01

    Deep space missions have a strong need for compact, high power density, reliable and long life electrical power generation and storage under extreme temperature conditions. Except for electrochemical batteries and solar cells, there are currently no available miniaturized power sources. Conventional power generators devices become inefficient in extreme environments (such as encountered in Mars, Venus or outer planet missions) and rechargeable energy storage devices can only be operated in a narrow temperature range thereby limiting mission duration. The planned development of much smaller spacecrafts incorporating a variety of micro/nanodevices and miniature vehicles will require novel, reliable power technologies. It is also expected that such micro power sources could have a wide range of terrestrial applications, in particular when the limited lifetime and environmental limitations of batteries are key factors. Advanced solid-state thermoelectric combined with radioisotope or waste heat sources and low profile energy storage devices are ideally suited for these applications. The Jet Propulsion Laboratory has been actively pursuing the development of thermoelectric micro/nanodevices that can be fabricated using a combination of electrochemical deposition and integrated circuit processing techniques. Some of the technical challenges associated with these micro/nanodevice concepts, their expected level of performance and experimental fabrication and testing results to date are presented and discussed.

  6. ON THE NEAR-INFRARED IDENTIFICATION OF THE INTEGRAL SOURCE IGR J16328–4726

    Energy Technology Data Exchange (ETDEWEB)

    Persi, P.; Fiocchi, M.; Bazzano, A.; Ubertini, P.; Parisi, P. [INAF/IAPS-Roma, Via fosso del cavaliere, 100, I-00133 Roma (Italy); Tapia, M. [Instituto de Astronomía, Universidad Nacional Autónoma de México, Ensenada, B.C. (Mexico); Roth, M., E-mail: paolo.persi@iaps.inaf.it [Las Campanas Observatory, Carnegie Institution of Washington, La Serena (Chile)

    2015-07-15

    The aim of this work is to identify the infrared (IR) counterpart of the Galactic high-mass X-ray binary IGR J16328–4726 discovered by the INTEGRAL satellite, and to derive the extinction and distance to the system. We present new deep sub-arcsecond JHK{sub s} imaging and low-resolution near-IR spectroscopy in the 1.5 and 2.4 μm range of IGR J16328–4726. We report the presence of two near-IR stellar sources separated by about 1.″8 at the location of the unresolved 2MASS source J16323791–4723409, previously considered to be the near-IR counterpart of the X-ray source. From the analysis of their near-IR colors and spectra as well as accurate positions, we uniquely identify the true IR counterpart of IGR J16328–4726. Our 1.5–2.4 μm spectrum of this star is consistent with the published classification O8Iafpe. Assuming this, and in combination with new JHK{sub s} photometry, a reddening A{sub V} = 23.6 ± 0.7 and a distance of 7.2 ± 0.3 kpc from the Sun are derived.

  7. Particle Filter with Integrated Voice Activity Detection for Acoustic Source Tracking

    Directory of Open Access Journals (Sweden)

    Anders M. Johansson

    2007-01-01

    Full Text Available In noisy and reverberant environments, the problem of acoustic source localisation and tracking (ASLT using an array of microphones presents a number of challenging difficulties. One of the main issues when considering real-world situations involving human speakers is the temporally discontinuous nature of speech signals: the presence of silence gaps in the speech can easily misguide the tracking algorithm, even in practical environments with low to moderate noise and reverberation levels. A natural extension of currently available sound source tracking algorithms is the integration of a voice activity detection (VAD scheme. We describe a new ASLT algorithm based on a particle filtering (PF approach, where VAD measurements are fused within the statistical framework of the PF implementation. Tracking accuracy results for the proposed method is presented on the basis of synthetic audio samples generated with the image method, whereas performance results obtained with a real-time implementation of the algorithm, and using real audio data recorded in a reverberant room, are published elsewhere. Compared to a previously proposed PF algorithm, the experimental results demonstrate the improved robustness of the method described in this work when tracking sources emitting real-world speech signals, which typically involve significant silence gaps between utterances.

  8. The Integration of Renewable Energy Sources into Electric Power Distribution Systems, Vol. II Utility Case Assessments

    Energy Technology Data Exchange (ETDEWEB)

    Zaininger, H.W.

    1994-01-01

    Electric utility distribution system impacts associated with the integration of renewable energy sources such as photovoltaics (PV) and wind turbines (WT) are considered in this project. The impacts are expected to vary from site to site according to the following characteristics: the local solar insolation and/or wind characteristics, renewable energy source penetration level, whether battery or other energy storage systems are applied, and local utility distribution design standards and planning practices. Small, distributed renewable energy sources are connected to the utility distribution system like other, similar kW- and MW-scale equipment and loads. Residential applications are expected to be connected to single-phase 120/240-V secondaries. Larger kW-scale applications may be connected to three+phase secondaries, and larger hundred-kW and y-scale applications, such as MW-scale windfarms, or PV plants, may be connected to electric utility primary systems via customer-owned primary and secondary collection systems. In any case, the installation of small, distributed renewable energy sources is expected to have a significant impact on local utility distribution primary and secondary system economics. Small, distributed renewable energy sources installed on utility distribution systems will also produce nonsite-specific utility generation system benefits such as energy and capacity displacement benefits, in addition to the local site-specific distribution system benefits. Although generation system benefits are not site-specific, they are utility-specific, and they vary significantly among utilities in different regions. In addition, transmission system benefits, environmental benefits and other benefits may apply. These benefits also vary significantly among utilities and regions. Seven utility case studies considering PV, WT, and battery storage were conducted to identify a range of potential renewable energy source distribution system applications. The

  9. Partitioning taxonomic diversity of aquatic insect assemblages ...

    Science.gov (United States)

    Biological diversity can be divided into: alpha (α, local), beta (β, difference in assemblage composition among locals), and gamma (γ, total diversity). We assessed the partitioning of taxonomic diversity of Ephemeroptera, Plecoptera and Trichoptera (EPT) and of functional feeding groups (FFG) in Neotropical Savanna (southeastern Brazilian Cerrado) streams. To do so, we considered three diversity components: stream site (α), among stream sites (β1), and among hydrologic units (β2). We also evaluated the association of EPT genera composition with heterogeneity in land use, instream physical habitat structure, and instream water quality variables. The percent of EPT taxonomic α diversity (20.7%) was lower than the β1 and β2 diversities (53.1% and 26.2%, respectively). The EPT FFG α diversity (26.5%) was lower than the β1 diversity (55.8%) and higher than the β2 (17.7%) diversity. The collector-gatherer FFG was predominant and had the greatest β diversity among stream sites (β1, 55.8%). Our findings support the need for implementing regional scale conservation strategies in the Cerrado biome, which has been degraded by anthropogenic activities. Using adaptations of the US EPA’s National Aquatic Resource Survey (NARS) designs and methods, Ferreira and colleagues examined the distribution of taxonomic and functional diversity of aquatic insects among basins, stream sites within basins, and within stream sample reaches. They sampled 160 low-order stre

  10. Taxonomic revision of Pachyptera (Bignonieae, Bignoniaceae

    Directory of Open Access Journals (Sweden)

    Jessica Nayara Carvalho Francisco

    2018-01-01

    Full Text Available Pachyptera DC. is a small genus of neotropical lianas included in tribe Bignonieae (Bignoniaceae. The genus has a complicated taxonomic history but currently includes species distributed from Belize to Southern Amazon. Pachyptera is characterised by four main synapomorphies, namely, a papery peeling bark, prophylls of the axillary buds organised in a series of three, patelliform glands arranged in lines in the upper portions of the calyx and corolla tube. Furthermore, members of the genus also have stems with four phloem wedges in cross-section and conspicuous extrafloral nectaries between the interpetiolar region and at the petiole apex, although these characters are also shared with other genera of tribe Bignonieae. Here, we present a taxonomic revision of Pachyptera, which includes a complete list of synonyms, detailed morphological descriptions of species and an identification key, as well as information on the habitat, distribution and phenology, nomenclatural notes, taxonomic comments and illustrations of all the species. In addition, we designate three lectotypes, propose one new combination, raise one variety to species status and describe a new species. After these adjustments, a Pachyptera with five well-defined species is recognised.

  11. Taxonomic revision of Pachyptera (Bignonieae, Bignoniaceae).

    Science.gov (United States)

    Francisco, Jessica Nayara Carvalho; Lohmann, Lúcia G

    2018-01-01

    Pachyptera DC. is a small genus of neotropical lianas included in tribe Bignonieae (Bignoniaceae). The genus has a complicated taxonomic history but currently includes species distributed from Belize to Southern Amazon. Pachyptera is characterised by four main synapomorphies, namely, a papery peeling bark, prophylls of the axillary buds organised in a series of three, patelliform glands arranged in lines in the upper portions of the calyx and corolla tube. Furthermore, members of the genus also have stems with four phloem wedges in cross-section and conspicuous extrafloral nectaries between the interpetiolar region and at the petiole apex, although these characters are also shared with other genera of tribe Bignonieae. Here, we present a taxonomic revision of Pachyptera , which includes a complete list of synonyms, detailed morphological descriptions of species and an identification key, as well as information on the habitat, distribution and phenology, nomenclatural notes, taxonomic comments and illustrations of all the species. In addition, we designate three lectotypes, propose one new combination, raise one variety to species status and describe a new species. After these adjustments, a Pachyptera with five well-defined species is recognised.

  12. Social Integration and Domestic Violence Support in an Indigenous Community: Women's Recommendations of Formal Versus Informal Sources of Support.

    Science.gov (United States)

    Gauthier, G Robin; Francisco, Sara C; Khan, Bilal; Dombrowski, Kirk

    2018-05-01

    Throughout North America, indigenous women experience higher rates of intimate partner violence and sexual violence than any other ethnic group, and so it is of particular importance to understand sources of support for Native American women. In this article, we use social network analysis to study the relationship between social integration and women's access to domestic violence support by examining the recommendations they would give to another woman in need. We ask two main questions: First, are less integrated women more likely to make no recommendation at all when compared with more socially integrated women? Second, are less integrated women more likely than more integrated women to nominate a formal source of support rather than an informal one? We use network data collected from interviews with 158 Canadian women residing in an indigenous community to measure their access to support. We find that, in general, less integrated women are less likely to make a recommendation than more integrated women. However, when they do make a recommendation, less integrated women are more likely to recommend a formal source of support than women who are more integrated. These results add to our understanding of how access to two types of domestic violence support is embedded in the larger set of social relations of an indigenous community.

  13. On-chip multi-wavelength laser sources fabricated using generic photonic integration technology

    NARCIS (Netherlands)

    Latkowski, S.; Williams, K.A.; Bente, E.A.J.M.

    Generic photonic integration technology platforms allow for design and fabrication of large complexity application specific photonic integrated circuits. Monolithic active-passive integration on indium phosphide substrate naturally enables a reliable co-integration of optical gain elements and

  14. Integrated spatiotemporal characterization of dust sources and outbreaks in Central and East Asia

    Science.gov (United States)

    Darmenova, Kremena T.

    The potential of atmospheric dust aerosols to modify the Earth's environment and climate has been recognized for some time. However, predicting the diverse impact of dust has several significant challenges. One is to quantify the complex spatial and temporal variability of dust burden in the atmosphere. Another is to quantify the fraction of dust originating from human-made sources. This thesis focuses on the spatiotemporal characterization of sources and dust outbreaks in Central and East Asia by integrating ground-based data, satellite multisensor observations, and modeling. A new regional dust modeling system capable of operating over a span of scales was developed. The modeling system consists of a dust module DuMo, which incorporates several dust emission schemes of different complexity, and the PSU/NCAR mesoscale model MM5, which offers a variety of physical parameterizations and flexible nesting capability. The modeling system was used to perform for the first time a comprehensive study of the timing, duration, and intensity of individual dust events in Central and East Asia. Determining the uncertainties caused by the choice of model physics, especially the boundary layer parameterization, and the dust production scheme was the focus of our study. Implications to assessments of the anthropogenic dust fraction in these regions were also addressed. Focusing on Spring 2001, an analysis of routine surface meteorological observations and satellite multi-sensor data was carried out in conjunction with modeling to determine the extent to which integrated data set can be used to characterize the spatiotemporal distribution of dust plumes at a range of temporal scales, addressing the active dust sources in China and Mongolia, mid-range transport and trans-Pacific, long-range transport of dust outbreaks on a case-by-case basis. This work demonstrates that adequate and consistent characterization of individual dust events is central to establishing a reliable

  15. Developing an eBook-Integrated High-Fidelity Mobile App Prototype for Promoting Child Motor Skills and Taxonomically Assessing Children’s Emotional Responses Using Face and Sound Topology

    Science.gov (United States)

    Brown, William; Liu, Connie; John, Rita Marie; Ford, Phoebe

    2014-01-01

    Developing gross and fine motor skills and expressing complex emotion is critical for child development. We introduce “StorySense”, an eBook-integrated mobile app prototype that can sense face and sound topologies and identify movement and expression to promote children’s motor skills and emotional developmental. Currently, most interactive eBooks on mobile devices only leverage “low-motor” interaction (i.e. tapping or swiping). Our app senses a greater breath of motion (e.g. clapping, snapping, and face tracking), and dynamically alters the storyline according to physical responses in ways that encourage the performance of predetermined motor skills ideal for a child’s gross and fine motor development. In addition, our app can capture changes in facial topology, which can later be mapped using the Facial Action Coding System (FACS) for later interpretation of emotion. StorySense expands the human computer interaction vocabulary for mobile devices. Potential clinical applications include child development, physical therapy, and autism. PMID:25954336

  16. Open source projects as incubators of innovation: From niche phenomenon to integral part of the software industry

    OpenAIRE

    Schrape, Jan-Felix

    2017-01-01

    Over the last 20 years, open source development has become an integral part of the software industry and a key component of the innovation strategies of all major IT providers. Against this backdrop, this paper seeks to develop a systematic overview of open source communities and their socio-economic contexts. I begin with a reconstruction of the genesis of open source software projects and their changing relation- ships to established IT companies. This is followed by the identification of f...

  17. Design, development and integration of a large scale multiple source X-ray computed tomography system

    International Nuclear Information System (INIS)

    Malcolm, Andrew A.; Liu, Tong; Ng, Ivan Kee Beng; Teng, Wei Yuen; Yap, Tsi Tung; Wan, Siew Ping; Kong, Chun Jeng

    2013-01-01

    X-ray Computed Tomography (CT) allows visualisation of the physical structures in the interior of an object without physically opening or cutting it. This technology supports a wide range of applications in the non-destructive testing, failure analysis or performance evaluation of industrial products and components. Of the numerous factors that influence the performance characteristics of an X-ray CT system the energy level in the X-ray spectrum to be used is one of the most significant. The ability of the X-ray beam to penetrate a given thickness of a specific material is directly related to the maximum available energy level in the beam. Higher energy levels allow penetration of thicker components made of more dense materials. In response to local industry demand and in support of on-going research activity in the area of 3D X-ray imaging for industrial inspection the Singapore Institute of Manufacturing Technology (SIMTech) engaged in the design, development and integration of large scale multiple source X-ray computed tomography system based on X-ray sources operating at higher energies than previously available in the Institute. The system consists of a large area direct digital X-ray detector (410 x 410 mm), a multiple-axis manipulator system, a 225 kV open tube microfocus X-ray source and a 450 kV closed tube millifocus X-ray source. The 225 kV X-ray source can be operated in either transmission or reflection mode. The body of the 6-axis manipulator system is fabricated from heavy-duty steel onto which high precision linear and rotary motors have been mounted in order to achieve high accuracy, stability and repeatability. A source-detector distance of up to 2.5 m can be achieved. The system is controlled by a proprietary X-ray CT operating system developed by SIMTech. The system currently can accommodate samples up to 0.5 x 0.5 x 0.5 m in size with weight up to 50 kg. These specifications will be increased to 1.0 x 1.0 x 1.0 m and 100 kg in future

  18. Evaluating sourcing and fluvial integration of plant wax biomarkers from the Peruvian Andes to Amazonian lowlands

    Science.gov (United States)

    Wu, M. S.; Feakins, S. J.; Ponton, C.; West, A. J.; Galy, V.

    2017-12-01

    The carbon and hydrogen isotopic compositions (respectively δ13C and δD) of plant wax biomarkers have been widely used to reconstruct past climate and environment. To understand how leaf waxes are sourced within a river catchment, and how their isotopic signature is transferred from source to sink, we study δ13C and δD of C29 n-alkanes and C30 n-alkanoic acids in the Madre de Dios River catchment along the eastern flank of the Peruvian Andes. We sampled soils across a 3.5km elevation transect and find gradients in δ13Cwax (ca. +1.5‰/km) and δDwax (ca. -10 ‰/km) similar to gradients in tree canopy leaves (Feakins et al., 2016 GCA; Wu et al., 2017 GCA). We also collected river suspended sediment samples along the Madre de Dios River and its tributaries, which together drain an area of 75,400 km2 and 6 km of elevation. We utilize soil data and a digital elevation model to construct isoscapes, delineate catchments for each river sampling location, predict river values assuming spatial uniform integration, and compare our predictions with observed values. Although both compounds generally follow isotopic gradients defined by catchment elevations, the dual isotope and compound-class comparison reveals additional processes. For C30 n-alkanoic acid we find an up to 1km lower-than-expected catchment signal, indicating degradation of upland contributions in transit and replacement with lowland inputs. In contrast, mountain-front river locations are susceptible to upland-biases (up to 1km higher sourcing) in C29 n-alkane sourcing, likely due to enhanced erosion and higher leaf wax stock in Andean soil compared to the lowland, and greater persistence of n-alkanes than n-alkanoic acids. For both compounds, the bias is eliminated with several hundred km of river transit across the floodplain. In one location, we identify significant petrogenic contamination of n-alkanes but not n-alkanoic acids. These results indicate the power in combining dual compound classes and

  19. A feasible system integrating combined heating and power system with ground-source heat pump

    International Nuclear Information System (INIS)

    Li, HongQiang; Kang, ShuShuo; Yu, Zhun; Cai, Bo; Zhang, GuoQiang

    2014-01-01

    A system integrating CHP (combined heating and power) subsystem based on natural gas and GSHP (ground-source heat pump subsystem) in series is proposed. By help of simulation software-Aspen Plus, the energy performance of a typical CHP and GSHP-S (S refers to ‘in series’) system was analyzed. The results show that the system can make a better use of waste heat in flue gas from CHP (combined heating and power subsystem). The total system energy efficiency is 123% and the COP (coefficient of performance) of GSHP (ground-source heat pump) subsystem is 5.3. A referenced CHP and GSHP-P (P refers to ‘in parallel’) system is used for comparison; its total system energy efficiency and COP of GSHP subsystem are 118.6% and 3.5 respectively. Compared with CHP and GSHP-P system with different operating parameters, the CHP and GSHP-S system can increase total system energy efficiency by 0.8–34.7%, with related output ratio of heat to power (R) from 1.9 to 18.3. Furthermore, the COP of GSHP subsystem can be increased between the range 3.6 and 6, which is much higher than that in conventional CHP and GSHP-P system. This study will be helpful for other efficient GSHP systems integrating if there is waste heat or other heat resources with low temperature. - Highlights: • CHP system based on natural gas and ground source heat pump. • The new system can make a better utilization of waste heat in flue gas by a special way. • The proposed system can realize energy saving potential from 0.8 to 34.7%. • The coefficient of performance of ground source heat pump subsystem is significantly improved from 3.5 to 3.6–6. • Warm water temperature and percentage of flue gas used to reheat are key parameters

  20. Broadband integrated mid infrared light sources as enabling technology for point of care mid-infrared spectroscopy

    Science.gov (United States)

    2017-08-20

    AFRL-AFOSR-JP-TR-2017-0061 Broadband integrated mid-infrared light sources as enabling technology for point-of-care mid- infrared spectroscopy Alex...mid-infrared light sources as enabling technology for point-of-care mid-infrared spectroscopy 5a.  CONTRACT NUMBER 5b.  GRANT NUMBER FA2386-16-1-4037...Broadband integrated mid-infrared light sources as enabling technology for point-of-care mid- infrared spectroscopy ” Date: 16th August 2017 Name

  1. Advanced RF and microwave functions based on an integrated optical frequency comb source.

    Science.gov (United States)

    Xu, Xingyuan; Wu, Jiayang; Nguyen, Thach G; Shoeiby, Mehrdad; Chu, Sai T; Little, Brent E; Morandotti, Roberto; Mitchell, Arnan; Moss, David J

    2018-02-05

    We demonstrate advanced transversal radio frequency (RF) and microwave functions based on a Kerr optical comb source generated by an integrated micro-ring resonator. We achieve extremely high performance for an optical true time delay aimed at tunable phased array antenna applications, as well as reconfigurable microwave photonic filters. Our results agree well with theory. We show that our true time delay would yield a phased array antenna with features that include high angular resolution and a wide range of beam steering angles, while the microwave photonic filters feature high Q factors, wideband tunability, and highly reconfigurable filtering shapes. These results show that our approach is a competitive solution to implementing reconfigurable, high performance and potentially low cost RF and microwave signal processing functions for applications including radar and communication systems.

  2. Delaunay Tetrahedralization of the Heart Based on Integration of Open Source Codes

    International Nuclear Information System (INIS)

    Pavarino, E; Neves, L A; Machado, J M; Momente, J C; Zafalon, G F D; Pinto, A R; Valêncio, C R; Godoy, M F de; Shiyou, Y; Nascimento, M Z do

    2014-01-01

    The Finite Element Method (FEM) is a way of numerical solution applied in different areas, as simulations used in studies to improve cardiac ablation procedures. For this purpose, the meshes should have the same size and histological features of the focused structures. Some methods and tools used to generate tetrahedral meshes are limited mainly by the use conditions. In this paper, the integration of Open Source Softwares is presented as an alternative to solid modeling and automatic mesh generation. To demonstrate its efficiency, the cardiac structures were considered as a first application context: atriums, ventricles, valves, arteries and pericardium. The proposed method is feasible to obtain refined meshes in an acceptable time and with the required quality for simulations using FEM

  3. Developing an open source-based spatial data infrastructure for integrated monitoring of mining areas

    Science.gov (United States)

    Lahn, Florian; Knoth, Christian; Prinz, Torsten; Pebesma, Edzer

    2014-05-01

    In all phases of mining campaigns, comprehensive spatial information is an essential requirement in order to ensure economically efficient but also safe mining activities as well as to reduce environmental impacts. Earth observation data acquired from various sources like remote sensing or ground measurements is important e.g. for the exploration of mineral deposits, the monitoring of mining induced impacts on vegetation or the detection of ground subsidence. The GMES4Mining project aims at exploring new remote sensing techniques and developing analysis methods on various types of sensor data to provide comprehensive spatial information during mining campaigns (BENECKE et al. 2013). One important task in this project is the integration of the data gathered (e.g. hyperspectral images, spaceborne radar data and ground measurements) as well as results of the developed analysis methods within a web-accessible data source based on open source software. The main challenges here are to provide various types and formats of data from different sensors and to enable access to analysis and processing techniques without particular software or licensing requirements for users. Furthermore the high volume of the involved data (especially hyperspectral remote sensing images) makes data transfer a major issue in this use case. To engage these problems a spatial data infrastructure (SDI) including a web portal as user frontend is being developed which allows users to access not only the data but also several analysis methods. The Geoserver software is used for publishing the data, which is then accessed and visualized in a JavaScript-based web portal. In order to perform descriptive statistics and some straightforward image processing techniques on the raster data (e.g. band arithmetic or principal component analysis) the statistics software R is implemented on a server and connected via Rserve. The analysis is controlled and executed directly by the user through the web portal and

  4. Grid Integration of Single Stage Solar PV System using Three-level Voltage Source Converter

    Science.gov (United States)

    Hussain, Ikhlaq; Kandpal, Maulik; Singh, Bhim

    2016-08-01

    This paper presents a single stage solar PV (photovoltaic) grid integrated power generating system using a three level voltage source converter (VSC) operating at low switching frequency of 900 Hz with robust synchronizing phase locked loop (RS-PLL) based control algorithm. To track the maximum power from solar PV array, an incremental conductance algorithm is used and this maximum power is fed to the grid via three-level VSC. The use of single stage system with three level VSC offers the advantage of low switching losses and the operation at high voltages and high power which results in enhancement of power quality in the proposed system. Simulated results validate the design and control algorithm under steady state and dynamic conditions.

  5. Redatuming controlled-source electromagnetic data using Stratton–Chu type integral transformations

    DEFF Research Database (Denmark)

    Zhdanov, Michael; Cai, Hongzhu

    2016-01-01

    We present a new method of analyzing controlled-source electromagnetic (CSEM) data based on redatuming of the observed data from the actual receivers into the virtual receivers. We use the Stratton–Chu type integral transform to calculate the EM field in the virtual receivers. The virtual receivers...... can be placed at any desirable position, including close to the target, which increases the sensitivity of the EM data to the target. The developed method provides an effective model-based interpolation/extrapolation tool for electromagnetic field data. This paper demonstrates that redatuming can...... be used for designing the optimized CSEM survey configuration. The numerical examples, for the Kevin Dome Electromagnetic Project Site, illustrate the practical effectiveness of the developed method....

  6. Screening of sustainable groundwater sources for integration into a regional drought-prone water supply system

    Directory of Open Access Journals (Sweden)

    H. Lucas

    2009-07-01

    Full Text Available This paper reports on the qualitative and quantitative screening of groundwater sources for integration into the public water supply system of the Algarve, Portugal. The results are employed in a decision support system currently under development for an integrated water resources management scheme in the region. Such a scheme is crucial for several reasons, including the extreme seasonal and annual variations in rainfall, the effect of climate change on more frequent and long-lasting droughts, the continuously increasing water demand and the high risk of a single-source water supply policy. The latter was revealed during the severe drought of 2004 and 2005, when surface reservoirs were depleted and the regional water demand could not be met, despite the drilling of emergency wells.

    For screening and selection, quantitative criteria are based on aquifer properties and well yields, whereas qualitative criteria are defined by water quality indices. These reflect the well's degree of violation of drinking water standards for different sets of variables, including toxicity parameters, nitrate and chloride, iron and manganese and microbiological parameters. Results indicate the current availability of at least 1100 l s−1 of high quality groundwater (55% of the regional demand, requiring only disinfection (900 l s−1 or basic treatment, prior to human consumption. These groundwater withdrawals are sustainable when compared to mean annual recharge, considering that at least 40% is preserved for ecological demands. A more accurate and comprehensive analysis of sustainability is performed with the help of steady-state and transient groundwater flow simulations, which account for aquifer geometry, boundary conditions, recharge and discharge rates, pumping activity and seasonality. They permit an advanced analysis of present and future scenarios and show that increasing water demands and decreasing rainfall will make

  7. Kernel integration scatter model for parallel beam gamma camera and SPECT point source response

    International Nuclear Information System (INIS)

    Marinkovic, P.M.

    2001-01-01

    Scatter correction is a prerequisite for quantitative single photon emission computed tomography (SPECT). In this paper a kernel integration scatter Scatter correction is a prerequisite for quantitative SPECT. In this paper a kernel integration scatter model for parallel beam gamma camera and SPECT point source response based on Klein-Nishina formula is proposed. This method models primary photon distribution as well as first Compton scattering. It also includes a correction for multiple scattering by applying a point isotropic single medium buildup factor for the path segment between the point of scatter an the point of detection. Gamma ray attenuation in the object of imaging, based on known μ-map distribution, is considered too. Intrinsic spatial resolution of the camera is approximated by a simple Gaussian function. Collimator is modeled simply using acceptance angles derived from the physical dimensions of the collimator. Any gamma rays satisfying this angle were passed through the collimator to the crystal. Septal penetration and scatter in the collimator were not included in the model. The method was validated by comparison with Monte Carlo MCNP-4a numerical phantom simulation and excellent results were obtained. The physical phantom experiments, to confirm this method, are planed to be done. (author)

  8. Global search tool for the Advanced Photon Source Integrated Relational Model of Installed Systems (IRMIS) database

    International Nuclear Information System (INIS)

    Quock, D.E.R.; Cianciarulo, M.B.

    2007-01-01

    The Integrated Relational Model of Installed Systems (IRMIS) is a relational database tool that has been implemented at the Advanced Photon Source to maintain an updated account of approximately 600 control system software applications, 400,000 process variables, and 30,000 control system hardware components. To effectively display this large amount of control system information to operators and engineers, IRMIS was initially built with nine Web-based viewers: Applications Organizing Index, IOC, PLC, Component Type, Installed Components, Network, Controls Spares, Process Variables, and Cables. However, since each viewer is designed to provide details from only one major category of the control system, the necessity for a one-stop global search tool for the entire database became apparent. The user requirements for extremely fast database search time and ease of navigation through search results led to the choice of Asynchronous JavaScript and XML (AJAX) technology in the implementation of the IRMIS global search tool. Unique features of the global search tool include a two-tier level of displayed search results, and a database data integrity validation and reporting mechanism.

  9. An integrated system for the energy production and accumulation from renewable sources: a rural tower prototype

    Science.gov (United States)

    Di Francesco, Silvia; Petrozzi, Alessandro; Montesarchio, Valeria

    2014-05-01

    This research work presents the implementation of an architectural prototype aiming at the complete energy self-sufficiency through an integrated system based on renewable energy. It is suitable for historical buildings in rural areas, isolated but important from natural and architectonical point of view. In addition to the energy aspects, it is important to protect the impact in terms of land-use and environment. This idea is also especially powerful because in the rural countries there are many little building centers abandoned because they are devoid of a connection to the electric energy grid and methane piping. Thus, taking inspiration from dove towers, architectural typology widespread in central Italy, a virtual model has been developed as an integrated system for renewable energy production, storage and supply. While recovering the ancient tower, it is possible to design and assembly an integrated intelligent system, able to combine energy supply and demand: a new tower that should be flexible, efficient and replicable in other contexts as manufacturing, commercial and residential ones. The prototype has been applied to a real case of study, an ancient complex located in Umbria Region. The sources for electric production installed on the tower are photovoltaics, on the head and shaft of the tower, hydropower and a biomass gasifier providing thermal too. A tank at the head of the tower allows an available hydraulic potential energy, for the turbine at any time, to cover photovoltaic lacks, caused by sudden loss of production, for environmental causes. Conversely, photovoltaic peaks, otherwise unusable, can be used to reload the water from the receiving tank at the foot of the tower, up to the tank in the head. The same underground tank acts as a thermal flywheel to optimize the geothermal heat pumps for the heat and cold production. Keywords: hydropower, photovoltaics, dove tower.

  10. HARVESTING, INTEGRATING AND DISTRIBUTING LARGE OPEN GEOSPATIAL DATASETS USING FREE AND OPEN-SOURCE SOFTWARE

    Directory of Open Access Journals (Sweden)

    R. Oliveira

    2016-06-01

    Full Text Available Federal, State and Local government agencies in the USA are investing heavily on the dissemination of Open Data sets produced by each of them. The main driver behind this thrust is to increase agencies’ transparency and accountability, as well as to improve citizens’ awareness. However, not all Open Data sets are easy to access and integrate with other Open Data sets available even from the same agency. The City and County of Denver Open Data Portal distributes several types of geospatial datasets, one of them is the city parcels information containing 224,256 records. Although this data layer contains many pieces of information it is incomplete for some custom purposes. Open-Source Software were used to first collect data from diverse City of Denver Open Data sets, then upload them to a repository in the Cloud where they were processed using a PostgreSQL installation on the Cloud and Python scripts. Our method was able to extract non-spatial information from a ‘not-ready-to-download’ source that could then be combined with the initial data set to enhance its potential use.

  11. Integrated Wavelength-Tunable Light Source for Optical Gas Sensing Systems

    Directory of Open Access Journals (Sweden)

    Bin Li

    2015-01-01

    Full Text Available A compact instrument consisting of a distributed feedback laser (DFB at 1.65 μm was developed as a light source for gas sensing systems using tunable diode laser absorption spectroscopy (TDLAS technique. The wavelength of laser is tuned by adjusting the laser working temperature and injection current, which are performed by self-developed temperature controller and current modulator respectively. Stability test shows the fluctuation of the laser temperature is within the range of ±0.02°C. For gas detection experiments, the wavelength is tuned around the gas absorption line by adjusting laser temperature and is then shifted periodically to scan across the absorption line by the laser current modulator, which generates a 10 Hz saw wave signal. In addition, the current modulator is able to generate sine wave signal for gas sensing systems using wavelength modulation spectroscopy (WMS technique involving extraction of harmonic signals. The spectrum test proves good stability that the spectrum was measured 6 times every 10 minutes at the constant temperature and current condition. This standalone instrument can be applied as a light source for detection systems of different gases by integrating lasers at corresponding wavelength.

  12. Dynamic pricing based on a cloud computing framework to support the integration of renewable energy sources

    Directory of Open Access Journals (Sweden)

    Rajeev Thankappan Nair

    2014-12-01

    Full Text Available Integration of renewable energy sources into the electric grid in the domestic sector results in bidirectional energy flow from the supply side of the consumer to the grid. Traditional pricing methods are difficult to implement in such a situation of bidirectional energy flow and they face operational challenges on the application of price-based demand side management programme because of the intermittent characteristics of renewable energy sources. In this study, a dynamic pricing method using real-time data based on a cloud computing framework is proposed to address the aforementioned issues. The case study indicates that the dynamic pricing captures the variation of energy flow in the household. The dynamic renewable factor introduced in the model supports consumer oriented pricing. A new method is presented in this study to determine the appropriate level of photovoltaic (PV penetration in the distribution system based on voltage stability aspect. The load flow study result for the electric grid in Kerala, India, indicates that the overvoltage caused by various PV penetration levels up to 33% is within the voltage limits defined for distribution feeders. The result justifies the selected level of penetration.

  13. Preliminary design and integration of EPICS operation interface for the Taiwan photon source

    International Nuclear Information System (INIS)

    Cheng, Y.S.; Jenny Chen; Chiu, P.C.; Kuo, C.H.; Liao, C.Y.; Hsu, K.T.; Wu, C.Y.

    2012-01-01

    The TPS (Taiwan Photon Source) is the latest generation 3 GeV synchrotron light source which has been in construction since 2010. The EPICS (Experimental Physics and Industrial Control System) framework is adopted as control system infrastructure for the TPS. The EPICS IOCs (Input Output Controller) and various database records have been gradually implemented to control and monitor available subsystems of the TPS at this moment. The subsystem includes timing, power supply, motion controller, miscellaneous Ethernet compliant devices etc. Through EPICS PVs (Process Variables) channel access, remote access I/O data via Ethernet interface can be observed by the usable graphical tool-kits, such as the EDM (Extensible Display Manager) and MATLAB. The operation interface mainly includes the function of setting, reading, save, restore and etc. Integration of operation interfaces will depend upon properties of each subsystem. In addition, the centralized management method is utilized to serve every client from file servers in order to maintain consistent versions of related EPICS files. (authors)

  14. Integrative response of plant mitochondrial electron transport chain to nitrogen source.

    Science.gov (United States)

    Hachiya, Takushi; Noguchi, Ko

    2011-02-01

    Nitrogen (N) availability is widely known as a determinant of plant growth and respiration rate. However, less attention has been paid to the effect of the type of N source (nitrate, nitrite or ammonium) on the respiratory system. This review summarizes the latest findings on this topic, with an emphasis on the effect of ammonium and nitric oxide (NO) on the respiratory system, and the physiological role of alternative oxidase (AOX). First, concentrated ammonium has been found to increase plant respiration rate (ammonium-dependent respiratory increase, ARI). We will introduce two hypotheses to explain ARI, futile ammonium cycling and excess reducing equivalents, and verify the validity of each hypothesis. We suggest that these two hypotheses are not necessarily mutually exclusive. Second, gene expression of AOX is suppressed when N is predominately available as nitrate instead of ammonium. We will discuss possible signaling pathways leading to this expression pattern. Third, while AOX expression is induced by NO, AOX activity itself is insensitive to NO. In contrast, activity of cytochrome c oxidase (COX) is sensitive to NO. We outline the NO production pathway, focusing on nitrite-dependent NO production, and discuss the physiological significance of the fact that AOX activity is insensitive to NO. Finally, this review aims to build an integrated scheme of the respiratory response to the type of N source, considering leaves in high light conditions or hypoxic roots.

  15. Multifunctional voltage source inverter for renewable energy integration and power quality conditioning.

    Science.gov (United States)

    Dai, NingYi; Lam, Chi-Seng; Zhang, WenChen

    2014-01-01

    In order to utilize the energy from the renewable energy sources, power conversion system is necessary, in which the voltage source inverter (VSI) is usually the last stage for injecting power to the grid. It is an economical solution to add the function of power quality conditioning to the grid-connected VSI in the low-voltage distribution system. Two multifunctional VSIs are studied in this paper, that is, inductive-coupling VSI and capacitive-coupling VSI, which are named after the fundamental frequency impedance of their coupling branch. The operation voltages of the two VSIs are compared when they are used for renewable energy integration and power quality conditioning simultaneously. The operation voltage of the capacitive-coupling VSI can be set much lower than that of the inductive-coupling VSI when reactive power is for compensating inductive loads. Since a large portion of the loads in the distribution system are inductive, the capacitive-coupling VSI is further studied. The design and control method of the multifunctional capacitive-coupling VSI are proposed in this paper. Simulation and experimental results are provided to show its validity.

  16. Evaluation of Online Information Sources on Alien Species in Europe: The Need of Harmonization and Integration

    Science.gov (United States)

    Gatto, Francesca; Katsanevakis, Stelios; Vandekerkhove, Jochen; Zenetos, Argyro; Cardoso, Ana Cristina

    2013-06-01

    Europe is severely affected by alien invasions, which impact biodiversity, ecosystem services, economy, and human health. A large number of national, regional, and global online databases provide information on the distribution, pathways of introduction, and impacts of alien species. The sufficiency and efficiency of the current online information systems to assist the European policy on alien species was investigated by a comparative analysis of occurrence data across 43 online databases. Large differences among databases were found which are partially explained by variations in their taxonomical, environmental, and geographical scopes but also by the variable efforts for continuous updates and by inconsistencies on the definition of "alien" or "invasive" species. No single database covered all European environments, countries, and taxonomic groups. In many European countries national databases do not exist, which greatly affects the quality of reported information. To be operational and useful to scientists, managers, and policy makers, online information systems need to be regularly updated through continuous monitoring on a country or regional level. We propose the creation of a network of online interoperable web services through which information in distributed resources can be accessed, aggregated and then used for reporting and further analysis at different geographical and political scales, as an efficient approach to increase the accessibility of information. Harmonization, standardization, conformity on international standards for nomenclature, and agreement on common definitions of alien and invasive species are among the necessary prerequisites.

  17. A new integral experiment on copper with DT neutron source at JAEA/FNS

    Energy Technology Data Exchange (ETDEWEB)

    Kwon, Saerom, E-mail: kwon.saerom@jaea.go.jp; Sato, Satoshi; Ohta, Masayuki; Ochiai, Kentaro; Konno, Chikara

    2016-11-01

    Highlights: • Integral experiment on copper with DT neutron was performed under small influence of background neutrons which were efficiently absorbed in the Li{sub 2}O layers. • The experimental analyses were carried out using MCNP5-1.40 and the recent nuclear data libraries. • The underestimation issue of the reaction rates related to lower energy neutrons is focused on. • The combination of the {sup 63}Cu data in JEFF-3.2 and {sup 65}Cu data in JENDL-4.0 gave the best C/E. • The specific cross section data of copper should be reassessed. - Abstract: In order to validate copper nuclear data, an integral experiment on copper with the DT neutron source at JAEA/FNS had been performed over 20 years ago. The experiment had showed that ratios of the calculated values to the experimental ones (C/Es) related to lower energy neutrons had been drastically smaller than unity. In order to reveal reasons of the small C/Es, we newly performed the integral experiment on copper with the DT neutron source at JAEA/FNS. A quasi-cylindrical copper assembly of 315 mm in radius and 608 mm in depth was covered with Li{sub 2}O blocks of 51 mm in thickness for the front and side parts and 153 mm in thickness for the rear part to exclude background neutrons which might affect the measured data. We measured reaction rates with 5 activation foils and fission rates with 2 micro fission chambers at the center of the assembly. The experiment was analyzed by using MCNP5-1.40 with the recent nuclear data libraries, ENDF/B-VII.1, JEFF-3.2 and JENDL-4.0. As a result, the C/E of the reaction rate of the {sup 197}Au(n,γ){sup 198}Au reaction improved by 10% from the previous result and the combination of the {sup 63}Cu data in JEFF-3.2 and {sup 65}Cu data in JENDL-4.0 increased the C/E by more 10% because of the resonance data of the {sup 63}Cu in JEFF-3.2. Moreover, the calculated result with the {sup 63}Cu data in JEFF-3.2 and {sup 65}Cu data in JENDL-4.0 with 10% larger elastic

  18. Large Scale Integration of Renewable Power Sources into the Vietnamese Power System

    Science.gov (United States)

    Kies, Alexander; Schyska, Bruno; Thanh Viet, Dinh; von Bremen, Lueder; Heinemann, Detlev; Schramm, Stefan

    2017-04-01

    The Vietnamese Power system is expected to expand considerably in upcoming decades. Power capacities installed are projected to grow from 39 GW in 2015 to 129.5 GW by 2030. Installed wind power capacities are expected to grow to 6 GW (0.8 GW 2015) and solar power capacities to 12 GW (0.85 GW 2015). This goes hand in hand with an increase of the renewable penetration in the power mix from 1.3% from wind and photovoltaics (PV) in 2015 to 5.4% by 2030. The overall potential for wind power in Vietnam is estimated to be around 24 GW. Moreover, the up-scaling of renewable energy sources was formulated as one of the priorized targets of the Vietnamese government in the National Power Development Plan VII. In this work, we investigate the transition of the Vietnamese power system towards high shares of renewables. For this purpose, we jointly optimise the expansion of renewable generation facilities for wind and PV, and the transmission grid within renewable build-up pathways until 2030 and beyond. To simulate the Vietnamese power system and its generation from renewable sources, we use highly spatially and temporally resolved historical weather and load data and the open source modelling toolbox Python for Power System Analysis (PyPSA). We show that the highest potential of renewable generation for wind and PV is observed in southern Vietnam and discuss the resulting need for transmission grid extensions in dependency of the optimal pathway. Furthermore, we show that the smoothing effect of wind power has several considerable beneficial effects and that the Vietnamese hydro power potential can be efficiently used to provide balancing opportunities. This work is part of the R&D Project "Analysis of the Large Scale Integration of Renewable Power into the Future Vietnamese Power System" (GIZ, 2016-2018).

  19. A calderón-preconditioned single source combined field integral equation for analyzing scattering from homogeneous penetrable objects

    KAUST Repository

    Valdés, Felipe

    2011-06-01

    A new regularized single source equation for analyzing scattering from homogeneous penetrable objects is presented. The proposed equation is a linear combination of a Calderón-preconditioned single source electric field integral equation and a single source magnetic field integral equation. The equation is immune to low-frequency and dense-mesh breakdown, and free from spurious resonances. Unlike dual source formulations, this equation involves operator products that cannot be discretized using standard procedures for discretizing standalone electric, magnetic, and combined field operators. Instead, the single source equation proposed here is discretized using a recently developed technique that achieves a well-conditioned mapping from div- to curl-conforming function spaces, thereby fully respecting the space mapping properties of the operators involved, and guaranteeing accuracy and stability. Numerical results show that the proposed equation and discretization technique give rise to rapidly convergent solutions. They also validate the equation\\'s resonant free character. © 2006 IEEE.

  20. Sources

    International Nuclear Information System (INIS)

    Duffy, L.P.

    1991-01-01

    This paper discusses the sources of radiation in the narrow perspective of radioactivity and the even narrow perspective of those sources that concern environmental management and restoration activities at DOE facilities, as well as a few related sources. Sources of irritation, Sources of inflammatory jingoism, and Sources of information. First, the sources of irritation fall into three categories: No reliable scientific ombudsman to speak without bias and prejudice for the public good, Technical jargon with unclear definitions exists within the radioactive nomenclature, and Scientific community keeps a low-profile with regard to public information. The next area of personal concern are the sources of inflammation. This include such things as: Plutonium being described as the most dangerous substance known to man, The amount of plutonium required to make a bomb, Talk of transuranic waste containing plutonium and its health affects, TMI-2 and Chernobyl being described as Siamese twins, Inadequate information on low-level disposal sites and current regulatory requirements under 10 CFR 61, Enhanced engineered waste disposal not being presented to the public accurately. Numerous sources of disinformation regarding low level radiation high-level radiation, Elusive nature of the scientific community, The Federal and State Health Agencies resources to address comparative risk, and Regulatory agencies speaking out without the support of the scientific community

  1. LabKey Server: An open source platform for scientific data integration, analysis and collaboration

    Science.gov (United States)

    2011-01-01

    Background Broad-based collaborations are becoming increasingly common among disease researchers. For example, the Global HIV Enterprise has united cross-disciplinary consortia to speed progress towards HIV vaccines through coordinated research across the boundaries of institutions, continents and specialties. New, end-to-end software tools for data and specimen management are necessary to achieve the ambitious goals of such alliances. These tools must enable researchers to organize and integrate heterogeneous data early in the discovery process, standardize processes, gain new insights into pooled data and collaborate securely. Results To meet these needs, we enhanced the LabKey Server platform, formerly known as CPAS. This freely available, open source software is maintained by professional engineers who use commercially proven practices for software development and maintenance. Recent enhancements support: (i) Submitting specimens requests across collaborating organizations (ii) Graphically defining new experimental data types, metadata and wizards for data collection (iii) Transitioning experimental results from a multiplicity of spreadsheets to custom tables in a shared database (iv) Securely organizing, integrating, analyzing, visualizing and sharing diverse data types, from clinical records to specimens to complex assays (v) Interacting dynamically with external data sources (vi) Tracking study participants and cohorts over time (vii) Developing custom interfaces using client libraries (viii) Authoring custom visualizations in a built-in R scripting environment. Diverse research organizations have adopted and adapted LabKey Server, including consortia within the Global HIV Enterprise. Atlas is an installation of LabKey Server that has been tailored to serve these consortia. It is in production use and demonstrates the core capabilities of LabKey Server. Atlas now has over 2,800 active user accounts originating from approximately 36 countries and 350

  2. LabKey Server: An open source platform for scientific data integration, analysis and collaboration

    Directory of Open Access Journals (Sweden)

    Lum Karl

    2011-03-01

    Full Text Available Abstract Background Broad-based collaborations are becoming increasingly common among disease researchers. For example, the Global HIV Enterprise has united cross-disciplinary consortia to speed progress towards HIV vaccines through coordinated research across the boundaries of institutions, continents and specialties. New, end-to-end software tools for data and specimen management are necessary to achieve the ambitious goals of such alliances. These tools must enable researchers to organize and integrate heterogeneous data early in the discovery process, standardize processes, gain new insights into pooled data and collaborate securely. Results To meet these needs, we enhanced the LabKey Server platform, formerly known as CPAS. This freely available, open source software is maintained by professional engineers who use commercially proven practices for software development and maintenance. Recent enhancements support: (i Submitting specimens requests across collaborating organizations (ii Graphically defining new experimental data types, metadata and wizards for data collection (iii Transitioning experimental results from a multiplicity of spreadsheets to custom tables in a shared database (iv Securely organizing, integrating, analyzing, visualizing and sharing diverse data types, from clinical records to specimens to complex assays (v Interacting dynamically with external data sources (vi Tracking study participants and cohorts over time (vii Developing custom interfaces using client libraries (viii Authoring custom visualizations in a built-in R scripting environment. Diverse research organizations have adopted and adapted LabKey Server, including consortia within the Global HIV Enterprise. Atlas is an installation of LabKey Server that has been tailored to serve these consortia. It is in production use and demonstrates the core capabilities of LabKey Server. Atlas now has over 2,800 active user accounts originating from approximately 36

  3. LabKey Server: an open source platform for scientific data integration, analysis and collaboration.

    Science.gov (United States)

    Nelson, Elizabeth K; Piehler, Britt; Eckels, Josh; Rauch, Adam; Bellew, Matthew; Hussey, Peter; Ramsay, Sarah; Nathe, Cory; Lum, Karl; Krouse, Kevin; Stearns, David; Connolly, Brian; Skillman, Tom; Igra, Mark

    2011-03-09

    Broad-based collaborations are becoming increasingly common among disease researchers. For example, the Global HIV Enterprise has united cross-disciplinary consortia to speed progress towards HIV vaccines through coordinated research across the boundaries of institutions, continents and specialties. New, end-to-end software tools for data and specimen management are necessary to achieve the ambitious goals of such alliances. These tools must enable researchers to organize and integrate heterogeneous data early in the discovery process, standardize processes, gain new insights into pooled data and collaborate securely. To meet these needs, we enhanced the LabKey Server platform, formerly known as CPAS. This freely available, open source software is maintained by professional engineers who use commercially proven practices for software development and maintenance. Recent enhancements support: (i) Submitting specimens requests across collaborating organizations (ii) Graphically defining new experimental data types, metadata and wizards for data collection (iii) Transitioning experimental results from a multiplicity of spreadsheets to custom tables in a shared database (iv) Securely organizing, integrating, analyzing, visualizing and sharing diverse data types, from clinical records to specimens to complex assays (v) Interacting dynamically with external data sources (vi) Tracking study participants and cohorts over time (vii) Developing custom interfaces using client libraries (viii) Authoring custom visualizations in a built-in R scripting environment. Diverse research organizations have adopted and adapted LabKey Server, including consortia within the Global HIV Enterprise. Atlas is an installation of LabKey Server that has been tailored to serve these consortia. It is in production use and demonstrates the core capabilities of LabKey Server. Atlas now has over 2,800 active user accounts originating from approximately 36 countries and 350 organizations. It tracks

  4. Model-Based Least Squares Reconstruction of Coded Source Neutron Radiographs: Integrating the ORNL HFIR CG1D Source Model

    Energy Technology Data Exchange (ETDEWEB)

    Santos-Villalobos, Hector J [ORNL; Gregor, Jens [University of Tennessee, Knoxville (UTK); Bingham, Philip R [ORNL

    2014-01-01

    At the present, neutron sources cannot be fabricated small and powerful enough in order to achieve high resolution radiography while maintaining an adequate flux. One solution is to employ computational imaging techniques such as a Magnified Coded Source Imaging (CSI) system. A coded-mask is placed between the neutron source and the object. The system resolution is increased by reducing the size of the mask holes and the flux is increased by increasing the size of the coded-mask and/or the number of holes. One limitation of such system is that the resolution of current state-of-the-art scintillator-based detectors caps around 50um. To overcome this challenge, the coded-mask and object are magnified by making the distance from the coded-mask to the object much smaller than the distance from object to detector. In previous work, we have shown via synthetic experiments that our least squares method outperforms other methods in image quality and reconstruction precision because of the modeling of the CSI system components. However, the validation experiments were limited to simplistic neutron sources. In this work, we aim to model the flux distribution of a real neutron source and incorporate such a model in our least squares computational system. We provide a full description of the methodology used to characterize the neutron source and validate the method with synthetic experiments.

  5. Generalizing human error rates: A taxonomic approach

    International Nuclear Information System (INIS)

    Buffardi, L.; Fleishman, E.; Allen, J.

    1989-01-01

    It is well established that human error plays a major role in malfunctioning of complex, technological systems and in accidents associated with their operation. Estimates of the rate of human error in the nuclear industry range from 20-65% of all system failures. In response to this, the Nuclear Regulatory Commission has developed a variety of techniques for estimating human error probabilities for nuclear power plant personnel. Most of these techniques require the specification of the range of human error probabilities for various tasks. Unfortunately, very little objective performance data on error probabilities exist for nuclear environments. Thus, when human reliability estimates are required, for example in computer simulation modeling of system reliability, only subjective estimates (usually based on experts' best guesses) can be provided. The objective of the current research is to provide guidelines for the selection of human error probabilities based on actual performance data taken in other complex environments and applying them to nuclear settings. A key feature of this research is the application of a comprehensive taxonomic approach to nuclear and non-nuclear tasks to evaluate their similarities and differences, thus providing a basis for generalizing human error estimates across tasks. In recent years significant developments have occurred in classifying and describing tasks. Initial goals of the current research are to: (1) identify alternative taxonomic schemes that can be applied to tasks, and (2) describe nuclear tasks in terms of these schemes. Three standardized taxonomic schemes (Ability Requirements Approach, Generalized Information-Processing Approach, Task Characteristics Approach) are identified, modified, and evaluated for their suitability in comparing nuclear and non-nuclear power plant tasks. An agenda for future research and its relevance to nuclear power plant safety is also discussed

  6. Taxonomic novelties within the genus Columnea (Gesneriaceae)

    International Nuclear Information System (INIS)

    Amaya Marquez, Marisol

    2010-01-01

    A new species of Columnea and a new variety of Columnea lanata (Seem.) Kuntze belonging to section Collandra (Gesneriaceae) are described and illustrated. The new species was found in the Pacific slopes of the Cordillera Occidental in the Department of Choco in Colombia; the new variety comes from the Pacific slopes of the Cordillera Occidental, in the region of Murri located at the North West of the Department of Antioquia . A taxonomic key to distinguish the new species from the morphologically closer species is presented.

  7. An integrated, open-source set of tools for urban vulnerability monitoring from Earth observation data

    Science.gov (United States)

    De Vecchi, Daniele; Harb, Mostapha; Dell'Acqua, Fabio; Aurelio Galeazzo, Daniel

    2015-04-01

    Aim: The paper introduces an integrated set of open-source tools designed to process medium and high-resolution imagery with the aim to extract vulnerability indicators [1]. Problem: In the context of risk monitoring [2], a series of vulnerability proxies can be defined, such as the extension of a built-up area or buildings regularity [3]. Different open-source C and Python libraries are already available for image processing and geospatial information (e.g. OrfeoToolbox, OpenCV and GDAL). They include basic processing tools but not vulnerability-oriented workflows. Therefore, it is of significant importance to provide end-users with a set of tools capable to return information at a higher level. Solution: The proposed set of python algorithms is a combination of low-level image processing and geospatial information handling tools along with high-level workflows. In particular, two main products are released under the GPL license: source code, developers-oriented, and a QGIS plugin. These tools were produced within the SENSUM project framework (ended December 2014) where the main focus was on earthquake and landslide risk. Further development and maintenance is guaranteed by the decision to include them in the platform designed within the FP 7 RASOR project . Conclusion: With the lack of a unified software suite for vulnerability indicators extraction, the proposed solution can provide inputs for already available models like the Global Earthquake Model. The inclusion of the proposed set of algorithms within the RASOR platforms can guarantee support and enlarge the community of end-users. Keywords: Vulnerability monitoring, remote sensing, optical imagery, open-source software tools References [1] M. Harb, D. De Vecchi, F. Dell'Acqua, "Remote sensing-based vulnerability proxies in the EU FP7 project SENSUM", Symposium on earthquake and landslide risk in Central Asia and Caucasus: exploiting remote sensing and geo-spatial information management, 29-30th January 2014

  8. SARNET integrated European Severe Accident Research-Conclusions in the source term area

    Energy Technology Data Exchange (ETDEWEB)

    Haste, T., E-mail: tim.haste@irsn.f [Paul Scherrer Institute, CH-5232 Villigen PSI (Switzerland); Giordano, P. [Institut de Radioprotection et de Surete Nucleaire, IRSN, BP 3, F-13115 St Paul lez Durance Cedex (France); Herranz, L. [Centro de Investigaciones Energeticas Medio Ambientales y Tecnologica, CIEMAT, Avda. Complutense 22, E-28040 Madrid (Spain); Girault, N.; Dubourg, R. [Institut de Radioprotection et de Surete Nucleaire, IRSN, BP 3, F-13115 St Paul lez Durance Cedex (France); Sabroux, J.-C. [Institut de Radioprotection et de Surete Nucleaire, IRSN, Saclay Research Centre, BP 68, F-91192 Gif-sur-Yvette Cedex (France); Cantrel, L. [Institut de Radioprotection et de Surete Nucleaire, IRSN, BP 3, F-13115 St Paul lez Durance Cedex (France); Bottomley, D. [European Commission Joint Research Centre, Transuranium Institute, P.O. Box 2340, D-76125 Karlsruhe (Germany); Parozzi, F. [ENEA - Ricerca sul Sistema Elettrico (ERSE) SpA., Via Rubattino 54, I-20134 Milano (Italy); Auvinen, A. [VTT Technical Research Centre of Finland, P.O. Box 1000, FI-02044 VTT Espoo (Finland); Dickinson, S. [National Nuclear Laboratory, Harwell Business Centre, Didcot, OX11 0QJ (United Kingdom); Lamy, J.-C. [Electricite de France, 12-14 avenue Dutrievoz, F-69100 Villeurbanne (France); Weber, G. [Gesellschaft fuer Anlagen- und Reaktorsicherheit (GRS) mbH, Forschungsgelaende, D-85748 Garching (Germany); Albiol, T. [Institut de Radioprotection et de Surete Nucleaire, IRSN, BP 3, F-13115 St Paul lez Durance Cedex (France)

    2009-12-15

    The overall aim of the SARNET (Severe Accident Research NETwork), in the EU 6th Framework programme was to integrate in a sustainable manner the research capabilities of fifty-one European organisations from eighteen member states of the European Union (EU) plus the Joint Research Centres, with one Canadian company, to resolve important remaining uncertainties and safety issues concerning existing and future nuclear plant, especially water-cooled reactors, under hypothetical severe accident conditions. It emphasised integrating activities, spreading of excellence (including knowledge transfer) and jointly executed research, with the knowledge gained being encapsulated in the European severe accident modelling code ASTEC. This paper summarises the achievements over the whole project in the Source Term Topic, which dealt with potential radioactive release to the environment, covering release of fission products and structural materials from the core, their transport in the primary circuit, and their behaviour in the containment. The main technical areas covered, as emphasised by the earlier EURSAFE project, were the effect of oxidative conditions on fission product release and transport (especially the behaviour of the highly radiotoxic ruthenium under air ingress conditions), iodine volatility in the primary circuit, control rod aerosol release (Ag-In-Cd) that affects iodine transport, containment by-pass in the case of steam generator tube rupture, aerosol retention in containment cracks, aerosol remobilisation in the circuit, and iodine/ruthenium behaviour in the containment especially concerning the volatile fraction in the atmosphere. The studies also covered performance of new experiments, analysis of existing data, and formulation and improvement of theoretical models. Significant progress was made in each area. Looking to the future, the 7th Framework successor project SARNET2 covers the remaining issues concerning iodine and ruthenium, including practical

  9. Model of complex integrated use of alternative energy sources for highly urbanized areas

    Directory of Open Access Journals (Sweden)

    Ivanova Elena Ivanovna

    2014-04-01

    Full Text Available The increase of population and continuous development of highly urbanized territories poses new challenges to experts in the field of energy saving technologies. Only a multifunctional and autonomous system of building engineering equipment formed by the principles of energy efficiency and cost-effectiveness meets the needs of modern urban environment. Alternative energy sources, exploiting the principle of converting thermal energy into electrical power, show lack of efficiency, so it appears to be necessary for reaching a visible progress to skip this middle step. A fuel cell, converting chemical energy straight into electricity, and offering a vast diversity of both fuel types and oxidizing agents, gives a strong base for designing a complex integrated system. Regarding the results of analysis and comparison conducted among the most types of fuel cells proposed by contemporary scholars, a solid oxide fuel cell (SOFC is approved to be able to ensure the smooth operation of such a system. While the advantages of this device meet the requirements of engineering equipment for modern civil and, especially, dwelling architecture, its drawbacks do not contradict with the operating regime of the proposed system. The article introduces a model of a multifunctional system based on solid oxide fuel cell (SOFC and not only covering the energy demand of a particular building, but also providing the opportunity for proper and economical operation of several additional sub-systems. Air heating and water cooling equipment, ventilating and conditioning devices, the circle of water supply and preparation of water discharge for external use (e.g. agricultural needs included into a closed circuit of the integrated system allow evaluating it as a promising model of further implementation of energy saving technologies into architectural and building practice. This, consequently, will positively affect both ecological and economic development of urban environment.

  10. An energy self-sufficient public building using integrated renewable sources and hydrogen storage

    International Nuclear Information System (INIS)

    Marino, C.; Nucara, A.; Pietrafesa, M.; Pudano, A.

    2013-01-01

    The control of the use of fossil fuels, major cause of greenhouse gas emissions and climate changes, in present days represents one of Governments' main challenges; particularly, a significant energy consumption is observed in buildings and might be significantly reduced through sustainable design, increased energy efficiency and use of renewable sources. At the moment, the widespread use of renewable energy in buildings is limited by its intrinsic discontinuity: consequently integration of plants with energy storage systems could represent an efficient solution to the problem. Within this frame, hydrogen has shown to be particularly fit in order to be used as an energetic carrier. In this aim, in the paper an energetic, economic and environmental analysis of two different configurations of a self-sufficient system for energy production from renewable sources in buildings is presented. In particular, in the first configuration energy production is carried out by means of photovoltaic systems, whereas in the second one a combination of photovoltaic panels and wind generators is used. In both configurations, hydrogen is used as an energy carrier, in order to store energy, and fuel cells guarantee its energetic reconversion. The analysis carried out shows that, although dimensioned as a stand-alone configuration, the system can today be realized only taking advantage from the incentivizing fares applied to grid-connected systems, that are likely to be suspended in the next future. In such case, it represents an interesting investment, with capital returns in about 15 years. As concerns economic sustainability, in fact, the analysis shows that the cost of the energy unit stored in hydrogen volumes, due to the not very high efficiency of the process, presently results greater than that of directly used one. Moreover, also the starting fund of the system proves to be very high, showing an additional cost with respect to systems lacking of energy storage equal to about 50

  11. Rockfall hazard assessment integrating probabilistic physically based rockfall source detection (Norddal municipality, Norway).

    Science.gov (United States)

    Yugsi Molina, F. X.; Oppikofer, T.; Fischer, L.; Hermanns, R. L.; Taurisano, A.

    2012-04-01

    Traditional techniques to assess rockfall hazard are partially based on probabilistic analysis. Stochastic methods has been used for run-out analysis of rock blocks to estimate the trajectories that a detached block will follow during its fall until it stops due to kinetic energy loss. However, the selection of rockfall source areas is usually defined either by multivariate analysis or by field observations. For either case, a physically based approach is not used for the source area detection. We present an example of rockfall hazard assessment that integrates a probabilistic rockfall run-out analysis with a stochastic assessment of the rockfall source areas using kinematic stability analysis in a GIS environment. The method has been tested for a steep more than 200 m high rock wall, located in the municipality of Norddal (Møre og Romsdal county, Norway), where a large number of people are either exposed to snow avalanches, rockfalls, or debris flows. The area was selected following the recently published hazard mapping plan of Norway. The cliff is formed by medium to coarse-grained quartz-dioritic to granitic gneisses of Proterozoic age. Scree deposits product of recent rockfall activity are found at the bottom of the rock wall. Large blocks can be found several tens of meters away from the cliff in Sylte, the main locality in the Norddal municipality. Structural characterization of the rock wall was done using terrestrial laser scanning (TLS) point clouds in the software Coltop3D (www.terranum.ch), and results were validated with field data. Orientation data sets from the structural characterization were analyzed separately to assess best-fit probability density functions (PDF) for both dip angle and dip direction angle of each discontinuity set. A GIS-based stochastic kinematic analysis was then carried out using the discontinuity set orientations and the friction angle as random variables. An airborne laser scanning digital elevation model (ALS-DEM) with 1 m

  12. sources

    Directory of Open Access Journals (Sweden)

    Shu-Yin Chiang

    2002-01-01

    Full Text Available In this paper, we study the simplified models of the ATM (Asynchronous Transfer Mode multiplexer network with Bernoulli random traffic sources. Based on the model, the performance measures are analyzed by the different output service schemes.

  13. ARCHITECTURE AND FUNCTIONALITY OF INTEGRATED INFORMATION SYSTEM FOR ANALYSIS OF POTENTIAL OF RENEWABLE ENERGY SOURCES

    Directory of Open Access Journals (Sweden)

    B. A. Tonkonogov

    2017-01-01

    Full Text Available The aim of the work was the development of the original architecture of an integrated information system for analysis of the potential of renewable energy sources. The required functionality of system has led to the solution of a number of problems in the development of appropriate software modules that implement methods, models and algorithms for assessing the energy potential and economic efficiency of the use of renewable energy sources (RES. This required the solution of the following problems: adaptation of existing and development of new methods for analyzing the potential of RES at various territorial levels using modern technologies of geographic information systems and computer technologies were accomplished; models for the assessment and calculation of the potential of renewable energy resources were developed; techniques for assessing of the economic effectiveness of decisions made for using of RES were adapted; architecture of the information system was developed and the choice of technologies and means for its implementation was made; algorithms of software modules and their interaction as a parts of the information system were developed. A distinctive feature of the architecture were flexibility and openness for the expansion and implementation of additional functionality, in particular the development of special algorithms and software modules for interacting with the database and a graphical Web-based user interface that provides the ability to work with cartographic information. The development and implementation of this system is a modern up-to-date scientific and practical task, the solution of which will create conditions for increased use of RES in RB and improving the country’s energy security. The results of conducted researches and completed developments can be used in the system of the Ministry of Natural Resources and Environmental Protection of RB, in particular for maintaining of the state cadastre of RES and making

  14. Comparison of Sewage and Animal Fecal Microbiomes by using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups

    Science.gov (United States)

    Most DNA-based microbial source tracking (MST) approaches target host-associated organisms within the order Bacteroidales, but human and other animal gut microbiota contain an array of other taxonomic groups that might serve as indicators for sources of fecal pollution. High thr...

  15. Charting taxonomic knowledge through ontologies and ranking algorithms

    Science.gov (United States)

    Huber, Robert; Klump, Jens

    2009-04-01

    Since the inception of geology as a modern science, paleontologists have described a large number of fossil species. This makes fossilized organisms an important tool in the study of stratigraphy and past environments. Since taxonomic classifications of organisms, and thereby their names, change frequently, the correct application of this tool requires taxonomic expertise in finding correct synonyms for a given species name. Much of this taxonomic information has already been published in journals and books where it is compiled in carefully prepared synonymy lists. Because this information is scattered throughout the paleontological literature, it is difficult to find and sometimes not accessible. Also, taxonomic information in the literature is often difficult to interpret for non-taxonomists looking for taxonomic synonymies as part of their research. The highly formalized structure makes Open Nomenclature synonymy lists ideally suited for computer aided identification of taxonomic synonyms. Because a synonymy list is a list of citations related to a taxon name, its bibliographic nature allows the application of bibliometric techniques to calculate the impact of synonymies and taxonomic concepts. TaxonRank is a ranking algorithm based on bibliometric analysis and Internet page ranking algorithms. TaxonRank uses published synonymy list data stored in TaxonConcept, a taxonomic information system. The basic ranking algorithm has been modified to include a measure of confidence on species identification based on the Open Nomenclature notation used in synonymy list, as well as other synonymy specific criteria. The results of our experiments show that the output of the proposed ranking algorithm gives a good estimate of the impact a published taxonomic concept has on the taxonomic opinions in the geological community. Also, our results show that treating taxonomic synonymies as part of on an ontology is a way to record and manage taxonomic knowledge, and thus contribute

  16. Natural gas usage as a heat source for integrated SMR and thermochemical hydrogen production technologies

    International Nuclear Information System (INIS)

    Jaber, O.; Naterer, G.F.; Dincer, I.

    2010-01-01

    This paper investigates various usages of natural gas (NG) as an energy source for different hydrogen production technologies. A comparison is made between the different methods of hydrogen production, based on the total amount of natural gas needed to produce a specific quantity of hydrogen, carbon dioxide emissions per mole of hydrogen produced, water requirements per mole of hydrogen produced, and a cost sensitivity analysis that takes into account the fuel cost, carbon dioxide capture cost and a carbon tax. The methods examined are the copper-chlorine (Cu-Cl) thermochemical cycle, steam methane reforming (SMR) and a modified sulfur-iodine (S-I) thermochemical cycle. Also, an integrated Cu-Cl/SMR plant is examined to show the unique advantages of modifying existing SMR plants with new hydrogen production technology. The analysis shows that the thermochemical Cu-Cl cycle out-performs the other conventional methods with respect to fuel requirements, carbon dioxide emissions and total cost of production. (author)

  17. Contaminant dispersion prediction and source estimation with integrated Gaussian-machine learning network model for point source emission in atmosphere

    Energy Technology Data Exchange (ETDEWEB)

    Ma, Denglong [Fuli School of Food Equipment Engineering and Science, Xi’an Jiaotong University, No.28 Xianning West Road, Xi’an 710049 (China); Zhang, Zaoxiao, E-mail: zhangzx@mail.xjtu.edu.cn [State Key Laboratory of Multiphase Flow in Power Engineering, Xi’an Jiaotong University, No.28 Xianning West Road, Xi’an 710049 (China); School of Chemical Engineering and Technology, Xi’an Jiaotong University, No.28 Xianning West Road, Xi’an 710049 (China)

    2016-07-05

    Highlights: • The intelligent network models were built to predict contaminant gas concentrations. • The improved network models coupled with Gaussian dispersion model were presented. • New model has high efficiency and accuracy for concentration prediction. • New model were applied to indentify the leakage source with satisfied results. - Abstract: Gas dispersion model is important for predicting the gas concentrations when contaminant gas leakage occurs. Intelligent network models such as radial basis function (RBF), back propagation (BP) neural network and support vector machine (SVM) model can be used for gas dispersion prediction. However, the prediction results from these network models with too many inputs based on original monitoring parameters are not in good agreement with the experimental data. Then, a new series of machine learning algorithms (MLA) models combined classic Gaussian model with MLA algorithm has been presented. The prediction results from new models are improved greatly. Among these models, Gaussian-SVM model performs best and its computation time is close to that of classic Gaussian dispersion model. Finally, Gaussian-MLA models were applied to identifying the emission source parameters with the particle swarm optimization (PSO) method. The estimation performance of PSO with Gaussian-MLA is better than that with Gaussian, Lagrangian stochastic (LS) dispersion model and network models based on original monitoring parameters. Hence, the new prediction model based on Gaussian-MLA is potentially a good method to predict contaminant gas dispersion as well as a good forward model in emission source parameters identification problem.

  18. Contaminant dispersion prediction and source estimation with integrated Gaussian-machine learning network model for point source emission in atmosphere

    International Nuclear Information System (INIS)

    Ma, Denglong; Zhang, Zaoxiao

    2016-01-01

    Highlights: • The intelligent network models were built to predict contaminant gas concentrations. • The improved network models coupled with Gaussian dispersion model were presented. • New model has high efficiency and accuracy for concentration prediction. • New model were applied to indentify the leakage source with satisfied results. - Abstract: Gas dispersion model is important for predicting the gas concentrations when contaminant gas leakage occurs. Intelligent network models such as radial basis function (RBF), back propagation (BP) neural network and support vector machine (SVM) model can be used for gas dispersion prediction. However, the prediction results from these network models with too many inputs based on original monitoring parameters are not in good agreement with the experimental data. Then, a new series of machine learning algorithms (MLA) models combined classic Gaussian model with MLA algorithm has been presented. The prediction results from new models are improved greatly. Among these models, Gaussian-SVM model performs best and its computation time is close to that of classic Gaussian dispersion model. Finally, Gaussian-MLA models were applied to identifying the emission source parameters with the particle swarm optimization (PSO) method. The estimation performance of PSO with Gaussian-MLA is better than that with Gaussian, Lagrangian stochastic (LS) dispersion model and network models based on original monitoring parameters. Hence, the new prediction model based on Gaussian-MLA is potentially a good method to predict contaminant gas dispersion as well as a good forward model in emission source parameters identification problem.

  19. TaxMan: a taxonomic database manager

    Directory of Open Access Journals (Sweden)

    Blaxter Mark

    2006-12-01

    Full Text Available Abstract Background Phylogenetic analysis of large, multiple-gene datasets, assembled from public sequence databases, is rapidly becoming a popular way to approach difficult phylogenetic problems. Supermatrices (concatenated multiple sequence alignments of multiple genes can yield more phylogenetic signal than individual genes. However, manually assembling such datasets for a large taxonomic group is time-consuming and error-prone. Additionally, sequence curation, alignment and assessment of the results of phylogenetic analysis are made particularly difficult by the potential for a given gene in a given species to be unrepresented, or to be represented by multiple or partial sequences. We have developed a software package, TaxMan, that largely automates the processes of sequence acquisition, consensus building, alignment and taxon selection to facilitate this type of phylogenetic study. Results TaxMan uses freely available tools to allow rapid assembly, storage and analysis of large, aligned DNA and protein sequence datasets for user-defined sets of species and genes. The user provides GenBank format files and a list of gene names and synonyms for the loci to analyse. Sequences are extracted from the GenBank files on the basis of annotation and sequence similarity. Consensus sequences are built automatically. Alignment is carried out (where possible, at the protein level and aligned sequences are stored in a database. TaxMan can automatically determine the best subset of taxa to examine phylogeny at a given taxonomic level. By using the stored aligned sequences, large concatenated multiple sequence alignments can be generated rapidly for a subset and output in analysis-ready file formats. Trees resulting from phylogenetic analysis can be stored and compared with a reference taxonomy. Conclusion TaxMan allows rapid automated assembly of a multigene datasets of aligned sequences for large taxonomic groups. By extracting sequences on the basis of

  20. Cross section measurement and integral test for several activation reactions using T + d and thick-Li + d sources

    International Nuclear Information System (INIS)

    Dumais, J.R.; Tanaka, S.; Odano, N.; Iwasaki, S.; Sugiyama, K.

    1988-01-01

    Recent activities on the area of the cross section measurement for several activation reactions at Department of Nucl. Eng., Tohoku Univ. are described. The first subject is the cross section measurement for (n,2n) reaction on aluminum using the RTNS-II neutron source. Cross sections with rather small error band were obtained for the incident neutron energies from 14 to 14.7 MeV. The second one is the status of the program for the integral experiments on several reactions using the thick Li + d source at Tohoku Fast Neutron Lab. The experimental results showed the usefullness of the source as a tool for the cross section assessment. (author)

  1. Taxonomic etymology – in search of inspiration

    Directory of Open Access Journals (Sweden)

    Piotr Jozwiak

    2015-07-01

    Full Text Available We present a review of the etymology of zoological taxonomic names with emphasis on the most unusual examples. The names were divided into several categories, starting from the most common – given after morphological features – through inspiration from mythology, legends, and classic literature but also from fictional and nonfictional pop-culture characters (e.g., music, movies or cartoons, science, and politics. A separate category includes zoological names created using word-play and figures of speech such as tautonyms, acronyms, anagrams, and palindromes. Our intention was to give an overview of possibilities of how and where taxonomists can find the inspirations that will be consistent with the ICZN rules and generate more detail afterthought about the naming process itself, the meaningful character of naming, as well as the recognition and understanding of names.

  2. Flexible taxonomic assignment of ambiguous sequencing reads

    Directory of Open Access Journals (Sweden)

    Jansson Jesper

    2011-01-01

    Full Text Available Abstract Background To characterize the diversity of bacterial populations in metagenomic studies, sequencing reads need to be accurately assigned to taxonomic units in a given reference taxonomy. Reads that cannot be reliably assigned to a unique leaf in the taxonomy (ambiguous reads are typically assigned to the lowest common ancestor of the set of species that match it. This introduces a potentially severe error in the estimation of bacteria present in the sample due to false positives, since all species in the subtree rooted at the ancestor are implicitly assigned to the read even though many of them may not match it. Results We present a method that maps each read to a node in the taxonomy that minimizes a penalty score while balancing the relevance of precision and recall in the assignment through a parameter q. This mapping can be obtained in time linear in the number of matching sequences, because LCA queries to the reference taxonomy take constant time. When applied to six different metagenomic datasets, our algorithm produces different taxonomic distributions depending on whether coverage or precision is maximized. Including information on the quality of the reads reduces the number of unassigned reads but increases the number of ambiguous reads, stressing the relevance of our method. Finally, two measures of performance are described and results with a set of artificially generated datasets are discussed. Conclusions The assignment strategy of sequencing reads introduced in this paper is a versatile and a quick method to study bacterial communities. The bacterial composition of the analyzed samples can vary significantly depending on how ambiguous reads are assigned depending on the value of the q parameter. Validation of our results in an artificial dataset confirm that a combination of values of q produces the most accurate results.

  3. Global taxonomic diversity of living reptiles.

    Science.gov (United States)

    Pincheira-Donoso, Daniel; Bauer, Aaron M; Meiri, Shai; Uetz, Peter

    2013-01-01

    Reptiles are one of the most ecologically and evolutionarily remarkable groups of living organisms, having successfully colonized most of the planet, including the oceans and some of the harshest and more environmentally unstable ecosystems on earth. Here, based on a complete dataset of all the world's diversity of living reptiles, we analyse lineage taxonomic richness both within and among clades, at different levels of the phylogenetic hierarchy. We also analyse the historical tendencies in the descriptions of new reptile species from Linnaeus to March 2012. Although (non-avian) reptiles are the second most species-rich group of amniotes after birds, most of their diversity (96.3%) is concentrated in squamates (59% lizards, 35% snakes, and 2% amphisbaenians). In strong contrast, turtles (3.4%), crocodilians (0.3%), and tuataras (0.01%) are far less diverse. In terms of species discoveries, most turtles and crocodilians were described early, while descriptions of lizards, snakes and amphisbaenians are multimodal with respect to time. Lizard descriptions, in particular, have reached unprecedented levels during the last decade. Finally, despite such remarkably asymmetric distributions of reptile taxonomic diversity among groups, we found that the distributions of lineage richness are consistently right-skewed, with most clades (monophyletic families and genera) containing few lineages (monophyletic genera and species, respectively), while only a few have radiated greatly (notably the families Colubridae and Scincidae, and the lizard genera Anolis and Liolaemus). Therefore, such consistency in the frequency distribution of richness among clades and among phylogenetic levels suggests that the nature of reptile biodiversity is fundamentally fractal (i.e., it is scale invariant). We then compared current reptile diversity with the global reptile diversity and taxonomy known in 1980. Despite substantial differences in the taxonomies (relative to 2012), the patterns of

  4. Global Taxonomic Diversity of Living Reptiles

    Science.gov (United States)

    Pincheira-Donoso, Daniel; Bauer, Aaron M.; Meiri, Shai; Uetz, Peter

    2013-01-01

    Reptiles are one of the most ecologically and evolutionarily remarkable groups of living organisms, having successfully colonized most of the planet, including the oceans and some of the harshest and more environmentally unstable ecosystems on earth. Here, based on a complete dataset of all the world’s diversity of living reptiles, we analyse lineage taxonomic richness both within and among clades, at different levels of the phylogenetic hierarchy. We also analyse the historical tendencies in the descriptions of new reptile species from Linnaeus to March 2012. Although (non-avian) reptiles are the second most species-rich group of amniotes after birds, most of their diversity (96.3%) is concentrated in squamates (59% lizards, 35% snakes, and 2% amphisbaenians). In strong contrast, turtles (3.4%), crocodilians (0.3%), and tuataras (0.01%) are far less diverse. In terms of species discoveries, most turtles and crocodilians were described early, while descriptions of lizards, snakes and amphisbaenians are multimodal with respect to time. Lizard descriptions, in particular, have reached unprecedented levels during the last decade. Finally, despite such remarkably asymmetric distributions of reptile taxonomic diversity among groups, we found that the distributions of lineage richness are consistently right-skewed, with most clades (monophyletic families and genera) containing few lineages (monophyletic genera and species, respectively), while only a few have radiated greatly (notably the families Colubridae and Scincidae, and the lizard genera Anolis and Liolaemus). Therefore, such consistency in the frequency distribution of richness among clades and among phylogenetic levels suggests that the nature of reptile biodiversity is fundamentally fractal (i.e., it is scale invariant). We then compared current reptile diversity with the global reptile diversity and taxonomy known in 1980. Despite substantial differences in the taxonomies (relative to 2012), the patterns of

  5. Global taxonomic diversity of living reptiles.

    Directory of Open Access Journals (Sweden)

    Daniel Pincheira-Donoso

    Full Text Available Reptiles are one of the most ecologically and evolutionarily remarkable groups of living organisms, having successfully colonized most of the planet, including the oceans and some of the harshest and more environmentally unstable ecosystems on earth. Here, based on a complete dataset of all the world's diversity of living reptiles, we analyse lineage taxonomic richness both within and among clades, at different levels of the phylogenetic hierarchy. We also analyse the historical tendencies in the descriptions of new reptile species from Linnaeus to March 2012. Although (non-avian reptiles are the second most species-rich group of amniotes after birds, most of their diversity (96.3% is concentrated in squamates (59% lizards, 35% snakes, and 2% amphisbaenians. In strong contrast, turtles (3.4%, crocodilians (0.3%, and tuataras (0.01% are far less diverse. In terms of species discoveries, most turtles and crocodilians were described early, while descriptions of lizards, snakes and amphisbaenians are multimodal with respect to time. Lizard descriptions, in particular, have reached unprecedented levels during the last decade. Finally, despite such remarkably asymmetric distributions of reptile taxonomic diversity among groups, we found that the distributions of lineage richness are consistently right-skewed, with most clades (monophyletic families and genera containing few lineages (monophyletic genera and species, respectively, while only a few have radiated greatly (notably the families Colubridae and Scincidae, and the lizard genera Anolis and Liolaemus. Therefore, such consistency in the frequency distribution of richness among clades and among phylogenetic levels suggests that the nature of reptile biodiversity is fundamentally fractal (i.e., it is scale invariant. We then compared current reptile diversity with the global reptile diversity and taxonomy known in 1980. Despite substantial differences in the taxonomies (relative to 2012, the

  6. Determination of a source term for a time fractional diffusion equation with an integral type over-determining condition

    Directory of Open Access Journals (Sweden)

    Timurkhan S. Aleroev

    2013-12-01

    Full Text Available We consider a linear heat equation involving a fractional derivative in time, with a nonlocal boundary condition. We determine a source term independent of the space variable, and the temperature distribution for a problem with an over-determining condition of integral type. We prove the existence and uniqueness of the solution, and its continuous dependence on the data.

  7. VISUALIZATION FROM INTRAOPERATIVE SWEPT-SOURCE MICROSCOPE-INTEGRATED OPTICAL COHERENCE TOMOGRAPHY IN VITRECTOMY FOR COMPLICATIONS OF PROLIFERATIVE DIABETIC RETINOPATHY.

    Science.gov (United States)

    Gabr, Hesham; Chen, Xi; Zevallos-Carrasco, Oscar M; Viehland, Christian; Dandrige, Alexandria; Sarin, Neeru; Mahmoud, Tamer H; Vajzovic, Lejla; Izatt, Joseph A; Toth, Cynthia A

    2018-01-10

    To evaluate the use of live volumetric (4D) intraoperative swept-source microscope-integrated optical coherence tomography in vitrectomy for proliferative diabetic retinopathy complications. In this prospective study, we analyzed a subgroup of patients with proliferative diabetic retinopathy complications who required vitrectomy and who were imaged by the research swept-source microscope-integrated optical coherence tomography system. In near real time, images were displayed in stereo heads-up display facilitating intraoperative surgeon feedback. Postoperative review included scoring image quality, identifying different diabetic retinopathy-associated pathologies and reviewing the intraoperatively documented surgeon feedback. Twenty eyes were included. Indications for vitrectomy were tractional retinal detachment (16 eyes), combined tractional-rhegmatogenous retinal detachment (2 eyes), and vitreous hemorrhage (2 eyes). Useful, good-quality 2D (B-scans) and 4D images were obtained in 16/20 eyes (80%). In these eyes, multiple diabetic retinopathy complications could be imaged. Swept-source microscope-integrated optical coherence tomography provided surgical guidance, e.g., in identifying dissection planes under fibrovascular membranes, and in determining residual membranes and traction that would benefit from additional peeling. In 4/20 eyes (20%), acceptable images were captured, but they were not useful due to high tractional retinal detachment elevation which was challenging for imaging. Swept-source microscope-integrated optical coherence tomography can provide important guidance during surgery for proliferative diabetic retinopathy complications through intraoperative identification of different complications and facilitation of intraoperative decision making.

  8. Reasoning over taxonomic change: exploring alignments for the Perelleschus use case.

    Science.gov (United States)

    Franz, Nico M; Chen, Mingmin; Yu, Shizhuo; Kianmajd, Parisa; Bowers, Shawn; Ludäscher, Bertram

    2015-01-01

    Classifications and phylogenetic inferences of organismal groups change in light of new insights. Over time these changes can result in an imperfect tracking of taxonomic perspectives through the re-/use of Code-compliant or informal names. To mitigate these limitations, we introduce a novel approach for aligning taxonomies through the interaction of human experts and logic reasoners. We explore the performance of this approach with the Perelleschus use case of Franz & Cardona-Duque (2013). The use case includes six taxonomies published from 1936 to 2013, 54 taxonomic concepts (i.e., circumscriptions of names individuated according to their respective source publications), and 75 expert-asserted Region Connection Calculus articulations (e.g., congruence, proper inclusion, overlap, or exclusion). An Open Source reasoning toolkit is used to analyze 13 paired Perelleschus taxonomy alignments under heterogeneous constraints and interpretations. The reasoning workflow optimizes the logical consistency and expressiveness of the input and infers the set of maximally informative relations among the entailed taxonomic concepts. The latter are then used to produce merge visualizations that represent all congruent and non-congruent taxonomic elements among the aligned input trees. In this small use case with 6-53 input concepts per alignment, the information gained through the reasoning process is on average one order of magnitude greater than in the input. The approach offers scalable solutions for tracking provenance among succeeding taxonomic perspectives that may have differential biases in naming conventions, phylogenetic resolution, ingroup and outgroup sampling, or ostensive (member-referencing) versus intensional (property-referencing) concepts and articulations.

  9. Advanced variable speed air source integrated heat pump (AS-IHP) development - CRADA final report

    Energy Technology Data Exchange (ETDEWEB)

    Baxter, Van D. [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States); Rice, C. Keith [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States); Munk, Jeffrey D. [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States); Ally, Moonis Raza [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States); Shen, Bo [Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

    2015-09-30

    Between August 2011 and September 2015, Oak Ridge National Laboratory (ORNL) and Nordyne, LLC (now Nortek Global HVAC LLC, NGHVAC) engaged in a Cooperative Research and Development Agreement (CRADA) to develop an air-source integrated heat pump (AS-IHP) system for the US residential market. Two generations of laboratory prototype systems were designed, fabricated, and lab-tested during 2011-2013. Performance maps for the system were developed using the latest research version of the DOE/ORNL Heat Pump Design Model, or HPDM, (Rice 1991; Rice and Jackson 2005; Shen et al 2012) as calibrated against the lab test data. These maps were the input to the TRNSYS (SOLAR Energy Laboratory, et al, 2010) system to predict annual performance relative to a baseline suite of equipment meeting minimum efficiency standards in effect in 2006 (combination of 13 SEER air-source heat pump (ASHP) and resistance water heater with Energy Factor (EF) of 0.9). Predicted total annual energy savings, while providing space conditioning and water heating for a tight, well insulated 2600 ft2 (242 m2) house at 5 U.S. locations, ranged from 46 to 61%, averaging 52%, relative to the baseline system (lowest savings at the cold-climate Chicago location). Predicted energy use for water heating was reduced 62 to 76% relative to resistance WH. Based on these lab prototype test and analyses results a field test prototype was designed and fabricated by NGHVAC. The unit was installed in a 2400 ft2 (223 m2) research house in Knoxville, TN and field tested from May 2014 to April 2015. Based on the demonstrated field performance of the AS-IHP prototype and estimated performance of a baseline system operating under the same loads and weather conditions, it was estimated that the prototype would achieve ~40% energy savings relative to the minimum efficiency suite. The estimated WH savings were >60% and SC mode savings were >50%. But estimated SH savings were only about 20%. It is believed that had the test

  10. Integrated mosquito larval source management reduces larval numbers in two highland villages in western Kenya

    Directory of Open Access Journals (Sweden)

    Imbahale Susan S

    2012-05-01

    Full Text Available Abstract Background In western Kenya, malaria remains one of the major health problems and its control remains an important public health measure. Malaria control is by either use of drugs to treat patients infected with malaria parasites or by controlling the vectors. Vector control may target the free living adult or aquatic (larval stages of mosquito. The most commonly applied control strategies target indoor resting mosquitoes. However, because mosquitoes spend a considerable time in water, targeting the aquatic stages can complement well with existing adult control measures. Methods Larval source management (LSM of malaria vectors was examined in two villages i.e. Fort Ternan and Lunyerere, with the aim of testing strategies that can easily be accessed by the affected communities. Intervention strategies applied include environmental management through source reduction (drainage of canals, land levelling or by filling ditches with soil, habitat manipulation (by provision of shading from arrow root plant, application of Bacillus thuringiensis var israelensis (Bti and the use of predatory fish, Gambusia affinis. The abundance of immature stages of Anopheles and Culex within intervention habitats was compared to that within non-intervention habitats. Results The findings show that in Fort Ternan no significant differences were observed in the abundance of Anopheles early and late instars between intervention and non-intervention habitats. In Lunyerere, the abundance of Anopheles early instars was fifty five times more likely to be present within non-intervention habitats than in habitats under drainage. No differences in early instars abundance were observed between non-intervention and habitats applied with Bti. However, late instars had 89 % and 91 % chance of being sampled from non-intervention rather than habitats under drainage and those applied with Bti respectively. Conclusion Most of these interventions were applied in habitats

  11. Air-Source Integrated Heat Pump System Development – Final Report

    Energy Technology Data Exchange (ETDEWEB)

    Baxter, Van D. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Rice, C. Keith [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Munk, Jeffrey D. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Ally, Moonis R. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Shen, Bo [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Uselton, R. B. [Lennox Industries, Inc., Knoxville, TN (United States)

    2017-07-01

    Between October 2007 and September 2017, Oak Ridge National Laboratory (ORNL) and Lennox Industries, Inc. (Lennox) engaged in a Cooperative Research and Development Agreement (CRADA) to develop an air-source integrated heat pump (AS-IHP) system for the US residential market. The Lennox AS-IHP concept consisted of a high-efficiency air-source heat pump (ASHP) for space heating and cooling services and a separate heat pump water heater/dehumidifier (WH/DH) module for domestic water heating and dehumidification (DH) services. A key feature of this system approach with the separate WH/DH is capability to pretreat (i.e., dehumidify) ventilation air and dedicated whole-house DH independent of the ASHP. Two generations of laboratory prototype WH/DH units were designed, fabricated, and lab tested. Performance maps for the system were developed using the latest research version of the US Department of Energy/ORNL heat pump design model (Rice 1992; Rice and Jackson 2005; Shen et al. 2012) as calibrated against the lab test data. These maps served as the input to TRNSYS (Solar Energy Laboratory et al. 2010) to predict annual performance relative to a baseline suite of equipment meeting minimum efficiency standards in effect in 2006 (i.e., a combination of an ASHP with a seasonal energy efficiency ratio (SEER) of 13 and resistance water heater with an energy factor (EF) of 0.9). Predicted total annual energy savings (based on use of a two-speed ASHP and the second-generation WH/DH prototype for the AS-IHP), while providing space conditioning, water heating, and dehumidification for a tight, well-insulated 2600 ft2 (242 m2) house at three US locations, ranged from 33 to 36%, averaging 35%, relative to the baseline system. The lowest savings were seen at the cold-climate Chicago location. Predicted energy use for water heating was reduced by about 50 to 60% relative to a resistance WH.

  12. A Falsification of the Citation Impediment in the Taxonomic Literature.

    Science.gov (United States)

    Steiner, Florian M; Pautasso, Marco; Zettel, Herbert; Moder, Karl; Arthofer, Wolfgang; Schlick-Steiner, Birgit C

    2015-09-01

    Current science evaluation still relies on citation performance, despite criticisms of purely bibliometric research assessments. Biological taxonomy suffers from a drain of knowledge and manpower, with poor citation performance commonly held as one reason for this impediment. But is there really such a citation impediment in taxonomy? We compared the citation numbers of 306 taxonomic and 2291 non-taxonomic research articles (2009-2012) on mosses, orchids, ciliates, ants, and snakes, using Web of Science (WoS) and correcting for journal visibility. For three of the five taxa, significant differences were absent in citation numbers between taxonomic and non-taxonomic papers. This was also true for all taxa combined, although taxonomic papers received more citations than non-taxonomic ones. Our results show that, contrary to common belief, taxonomic contributions do not generally reduce a journal's citation performance and might even increase it. The scope of many journals rarely featuring taxonomy would allow editors to encourage a larger number of taxonomic submissions. Moreover, between 1993 and 2012, taxonomic publications accumulated faster than those from all biological fields. However, less than half of the taxonomic studies were published in journals in WoS. Thus, editors of highly visible journals inviting taxonomic contributions could benefit from taxonomy's strong momentum. The taxonomic output could increase even more than at its current growth rate if: (i) taxonomists currently publishing on other topics returned to taxonomy and (ii) non-taxonomists identifying the need for taxonomic acts started publishing these, possibly in collaboration with taxonomists. Finally, considering the high number of taxonomic papers attracted by the journal Zootaxa, we expect that the taxonomic community would indeed use increased chances of publishing in WoS indexed journals. We conclude that taxonomy's standing in the present citation-focused scientific landscape could

  13. Worldwide Analysis of Sedimentary DNA Reveals Major Gaps in Taxonomic Knowledge of Deep-Sea Benthos

    DEFF Research Database (Denmark)

    Sinniger, Frédéric; Pawlowski, Jan; Harii, Saki

    2016-01-01

    in 39 deep-sea sediment samples from bathyal and abyssal depths worldwide. The eDNA dataset was dominated by meiobenthic taxa and we identified all animal phyla commonly found in the deep-sea benthos; yet, the diversity within these phyla remains largely unknown. The large numbers of taxonomically...... for pure and applied deep-sea environmental research but also emphasizes the necessity to integrate such new approaches with traditional morphology-based examination of deep-sea organisms....

  14. DISCOVERY OF X-RAY PULSATIONS FROM THE INTEGRAL SOURCE IGR J11014–6103

    Energy Technology Data Exchange (ETDEWEB)

    Halpern, J. P.; Gotthelf, E. V.; Camilo, F. [Columbia Astrophysics Laboratory, Columbia University, 550 West 120th Street, New York, NY 10027 (United States); Tomsick, J. A. [Space Sciences Laboratory, 7 Gauss Way, University of California, Berkeley, CA 94720-7450 (United States); Ng, C.-Y. [Department of Physics, The University of Hong Kong, Pokfulam Road, Hong Kong (China); Bodaghee, A. [Georgia College and State University, CBX 82, Milledgeville, GA 31061 (United States); Rodriguez, J.; Chaty, S. [Laboratoire AIM (UMR-E 9005 CEA/DSM-CNRS-Université Paris Diderot), Irfu/Service d' Astrophysique, CEA-Saclay, F-91191 Gif-sur-Yvette Cedex (France); Rahoui, F., E-mail: jules@astro.columbia.edu [European Southern Observatory, Karl Schwarzschild-Strasse 2, D-85748 Garching bei München (Germany)

    2014-11-10

    We report the discovery of PSR J1101–6101, a 62.8 ms pulsar in IGR J11014–6103, a hard X-ray source with a jet and a cometary tail that strongly suggests it is moving away from the center of the supernova remnant (SNR) MSH 11–61A at v > 1000 km s{sup –1}. Two XMM-Newton observations were obtained with the EPIC pn in small window mode, resulting in the measurement of its spin-down luminosity E-dot =1.36×10{sup 36} erg s{sup –1}, characteristic age τ {sub c} = 116 kyr, and surface magnetic field strength B{sub s} = 7.4 × 10{sup 11} G. In comparison to τ {sub c}, the 10-30 kyr age estimated for MSH 11–61A suggests that the pulsar was born in the SNR with initial period in the range 54 ≤ P {sub 0} ≤ 60 ms. PSR J1101–6101 is the least energetic of the 15 rotation-powered pulsars detected by INTEGRAL, and has a high efficiency of hard X-ray radiation and jet power. We examine the shape of the cometary nebula in a Chandra image, which is roughly consistent with a bow shock at the velocity inferred from the SNR age and the pulsar's E-dot . However, its structure differs in detail from the classic bow shock, and we explore possible reasons for this.

  15. A novel integrated approach for the hazardous radioactive dust source terms estimation in future nuclear fusion power plants.

    Science.gov (United States)

    Poggi, L A; Malizia, A; Ciparisse, J F; Gaudio, P

    2016-10-01

    An open issue still under investigation by several international entities working on the safety and security field for the foreseen nuclear fusion reactors is the estimation of source terms that are a hazard for the operators and public, and for the machine itself in terms of efficiency and integrity in case of severe accident scenarios. Source term estimation is a crucial key safety issue to be addressed in the future reactors safety assessments, and the estimates available at the time are not sufficiently satisfactory. The lack of neutronic data along with the insufficiently accurate methodologies used until now, calls for an integrated methodology for source term estimation that can provide predictions with an adequate accuracy. This work proposes a complete methodology to estimate dust source terms starting from a broad information gathering. The wide number of parameters that can influence dust source term production is reduced with statistical tools using a combination of screening, sensitivity analysis, and uncertainty analysis. Finally, a preliminary and simplified methodology for dust source term production prediction for future devices is presented.

  16. Capability Maturity Model Integration (CMMISM), Version 1.1 CMMISM for Systems Engineering, Software Engineering, Integrated Product and Process Development, and Supplier Sourcing (CMMI-SE/SW/IPPD/SS, V1.1). Staged Representation

    National Research Council Canada - National Science Library

    2002-01-01

    .... Concepts covered by this model include systems engineering, software engineering, integrated product and process development, and supplier sourcing as well as traditional CMM concepts such as process...

  17. Electrical hubs: An effective way to integrate non-dispatchable renewable energy sources with minimum impact to the grid

    International Nuclear Information System (INIS)

    Perera, A.T.D.; Nik, Vahid M.; Mauree, Dasaraden; Scartezzini, Jean-Louis

    2017-01-01

    Highlights: • A novel method introduced to optimize Electrical Hubs. • Novel dispatch based on fuzzy control and finite state machines. • Evaluating sensitivity of three performance indices for system autonomy. • Multi objective optimization considering system autonomy-cost. • Electrical Hubs can cover above 60% of the demand using wind and Solar PV. - Abstract: A paradigm change in energy system design tools, energy market, and energy policy is required to attain the target levels in renewable energy integration and in minimizing pollutant emissions in power generation. Integrating non-dispatchable renewable energy sources such as solar and wind energy is vital in this context. Distributed generation has been identified as a promising method to integrate Solar PV (SPV) and wind energy into grid in recent literature. Distributed generation using grid-tied electrical hubs, which consist of Internal Combustion Generator (ICG), non-dispatchable energy sources (i.e., wind turbines and SPV panels) and energy storage for providing the electricity demand in Sri Lanka is considered in this study. A novel dispatch strategy is introduced to address the limitations in the existing methods in optimizing grid-integrated electrical hubs considering real time pricing of the electricity grid and curtailments in grid integration. Multi-objective optimization is conducted for the system design considering grid integration level and Levelized Energy Cost (LEC) as objective functions to evaluate the potential of electrical hubs to integrate SPV and wind energy. The sensitivity of grid curtailments, energy market, price of wind turbines and SPV panels on Pareto front is evaluated subsequently. Results from the Pareto analysis demonstrate the potential of electrical hubs to cover more than 60% of the annual electricity demand from SPV and wind energy considering stringent grid curtailments. Such a share from SPV and wind energy is quite significant when compared to direct grid

  18. Alternative energy sources or integrated alternative energy systems? Oil as a modern lance of Peleus for the energy transition

    International Nuclear Information System (INIS)

    Szklo, Alexandre; Schaeffer, Roberto

    2006-01-01

    In this viewpoint, we discuss the importance of consorting alternative energy sources with oil, and not of opposing them. That is why we introduce the concept of alternative energy systems, which we feel is broader-ranging and more effective than alternative energy sources, as this deals with the actual transformation process of the global energy system. Alternative energy systems integrate oil with other energy sources and pave the way for new systems, which will benefit from what we call the 'virtues of oil'. They produce energy carriers for multi-fuel and multi-product strategies, where flexibility is a key target, allied to other co-benefits, especially those related to the increased use of renewable energy sources. The concept of alternative energy systems can bring a new light to the oil transition era discussion and might also influence energy policies for promoting renewables

  19. Integration of EEG source imaging and fMRI during continuous viewing of natural movies.

    Science.gov (United States)

    Whittingstall, Kevin; Bartels, Andreas; Singh, Vanessa; Kwon, Soyoung; Logothetis, Nikos K

    2010-10-01

    Electroencephalography (EEG) and functional magnetic resonance imaging (fMRI) are noninvasive neuroimaging tools which can be used to measure brain activity with excellent temporal and spatial resolution, respectively. By combining the neural and hemodynamic recordings from these modalities, we can gain better insight into how and where the brain processes complex stimuli, which may be especially useful in patients with different neural diseases. However, due to their vastly different spatial and temporal resolutions, the integration of EEG and fMRI recordings is not always straightforward. One fundamental obstacle has been that paradigms used for EEG experiments usually rely on event-related paradigms, while fMRI is not limited in this regard. Therefore, here we ask whether one can reliably localize stimulus-driven EEG activity using the continuously varying feature intensities occurring in natural movie stimuli presented over relatively long periods of time. Specifically, we asked whether stimulus-driven aspects in the EEG signal would be co-localized with the corresponding stimulus-driven BOLD signal during free viewing of a movie. Secondly, we wanted to integrate the EEG signal directly with the BOLD signal, by estimating the underlying impulse response function (IRF) that relates the BOLD signal to the underlying current density in the primary visual area (V1). We made sequential fMRI and 64-channel EEG recordings in seven subjects who passively watched 2-min-long segments of a James Bond movie. To analyze EEG data in this natural setting, we developed a method based on independent component analysis (ICA) to reject EEG artifacts due to blinks, subject movement, etc., in a way unbiased by human judgment. We then calculated the EEG source strength of this artifact-free data at each time point of the movie within the entire brain volume using low-resolution electromagnetic tomography (LORETA). This provided for every voxel in the brain (i.e., in 3D space) an

  20. Jenkins-CI, an Open-Source Continuous Integration System, as a Scientific Data and Image-Processing Platform

    Science.gov (United States)

    Moutsatsos, Ioannis K.; Hossain, Imtiaz; Agarinis, Claudia; Harbinski, Fred; Abraham, Yann; Dobler, Luc; Zhang, Xian; Wilson, Christopher J.; Jenkins, Jeremy L.; Holway, Nicholas; Tallarico, John; Parker, Christian N.

    2016-01-01

    High-throughput screening generates large volumes of heterogeneous data that require a diverse set of computational tools for management, processing, and analysis. Building integrated, scalable, and robust computational workflows for such applications is challenging but highly valuable. Scientific data integration and pipelining facilitate standardized data processing, collaboration, and reuse of best practices. We describe how Jenkins-CI, an “off-the-shelf,” open-source, continuous integration system, is used to build pipelines for processing images and associated data from high-content screening (HCS). Jenkins-CI provides numerous plugins for standard compute tasks, and its design allows the quick integration of external scientific applications. Using Jenkins-CI, we integrated CellProfiler, an open-source image-processing platform, with various HCS utilities and a high-performance Linux cluster. The platform is web-accessible, facilitates access and sharing of high-performance compute resources, and automates previously cumbersome data and image-processing tasks. Imaging pipelines developed using the desktop CellProfiler client can be managed and shared through a centralized Jenkins-CI repository. Pipelines and managed data are annotated to facilitate collaboration and reuse. Limitations with Jenkins-CI (primarily around the user interface) were addressed through the selection of helper plugins from the Jenkins-CI community. PMID:27899692

  1. Jenkins-CI, an Open-Source Continuous Integration System, as a Scientific Data and Image-Processing Platform.

    Science.gov (United States)

    Moutsatsos, Ioannis K; Hossain, Imtiaz; Agarinis, Claudia; Harbinski, Fred; Abraham, Yann; Dobler, Luc; Zhang, Xian; Wilson, Christopher J; Jenkins, Jeremy L; Holway, Nicholas; Tallarico, John; Parker, Christian N

    2017-03-01

    High-throughput screening generates large volumes of heterogeneous data that require a diverse set of computational tools for management, processing, and analysis. Building integrated, scalable, and robust computational workflows for such applications is challenging but highly valuable. Scientific data integration and pipelining facilitate standardized data processing, collaboration, and reuse of best practices. We describe how Jenkins-CI, an "off-the-shelf," open-source, continuous integration system, is used to build pipelines for processing images and associated data from high-content screening (HCS). Jenkins-CI provides numerous plugins for standard compute tasks, and its design allows the quick integration of external scientific applications. Using Jenkins-CI, we integrated CellProfiler, an open-source image-processing platform, with various HCS utilities and a high-performance Linux cluster. The platform is web-accessible, facilitates access and sharing of high-performance compute resources, and automates previously cumbersome data and image-processing tasks. Imaging pipelines developed using the desktop CellProfiler client can be managed and shared through a centralized Jenkins-CI repository. Pipelines and managed data are annotated to facilitate collaboration and reuse. Limitations with Jenkins-CI (primarily around the user interface) were addressed through the selection of helper plugins from the Jenkins-CI community.

  2. INTEGRAL INDEX OF OPERATION QUALITY FOR EVALUATION OF IMPACT OF DISTRIBUTIVE GENERATION SOURCES ON ELECTRIC NETWORK MODES

    Directory of Open Access Journals (Sweden)

    Petro D. Lezhniuk

    2017-06-01

    Full Text Available Method of operation quality evaluation of electric network, comprising renewable sources of energy (RSE is considered. Integral index that enables to evaluate the impact of RSE on energy losses and its quality as well as balance reliability in electric network is suggested. Mathematical model is constructed, taking into account the assumption that electric network with RSE may be in various operation modes, characterized by different technical economic indices. To determine the integral index of operation quality of electric network with RSE in all possible states tools of Markov processes theory and criterial method are used.

  3. The balancing problem of distributed generation and the integration of different renewable energy sources

    DEFF Research Database (Denmark)

    Lund, Henrik

    2004-01-01

    The article presents the results of analyses of large- scale integration of wind power, photo voltaic and wave power into a Danish reference energy system......The article presents the results of analyses of large- scale integration of wind power, photo voltaic and wave power into a Danish reference energy system...

  4. The balancing problem of distrubuted generation and the integration of different renewable energy sources

    DEFF Research Database (Denmark)

    Lund, Henrik

    2004-01-01

    The article presents the results of analyses of large-scale integration of wind power, photo voltaic and wave power into a Danish reference energy system.......The article presents the results of analyses of large-scale integration of wind power, photo voltaic and wave power into a Danish reference energy system....

  5. An edit script for taxonomic classifications

    Directory of Open Access Journals (Sweden)

    Valiente Gabriel

    2005-08-01

    Full Text Available Abstract Background The NCBI taxonomy provides one of the most powerful ways to navigate sequence data bases but currently users are forced to formulate queries according to a single taxonomic classification. Given that there is not universal agreement on the classification of organisms, providing a single classification places constraints on the questions biologists can ask. However, maintaining multiple classifications is burdensome in the face of a constantly growing NCBI classification. Results In this paper, we present a solution to the problem of generating modifications of the NCBI taxonomy, based on the computation of an edit script that summarises the differences between two classification trees. Our algorithms find the shortest possible edit script based on the identification of all shared subtrees, and only take time quasi linear in the size of the trees because classification trees have unique node labels. Conclusion These algorithms have been recently implemented, and the software is freely available for download from http://darwin.zoology.gla.ac.uk/~rpage/forest/.

  6. Elaiophores: their taxonomic distribution, morphology and functions

    Directory of Open Access Journals (Sweden)

    Clivia Carolina Fiorilo Possobom

    Full Text Available ABSTRACT Elaiophores are floral glands that secrete non-volatile oils as a reward for their pollinators. Their secretions mediate a specialized interaction between oil-producing plants and a few species of oil-collecting bees - Apidae and Melittidae. The present review focuses on the morphological and functional aspects of these secretory structures. We also provide information on their chemistry and pollination ecology. Our survey is organized taxonomically among the plant families for which elaiophore occurrence has been confirmed -for the monocots, Iridaceae and Orchidaceae, and for the eudicots, Calceolariaceae, Cucurbitaceae, Krameriaceae, Malpighiaceae, Plantaginaceae, Primulaceae, Scrophulariaceae, Solanaceae and Stilbaceae. Most oil flowers are zygomorphic, bisexual, nectarless and present their elaiophores on the protective whorls or on the androecium. Trichomal elaiophores are reported in all of these families except Krameriaceae and Malpighiaceae, and they vary in the density and morphology of the trichomes. Epithelial elaiophores occur in some monocot representatives and in Krameriaceae and Malpighiaceae, and are similar among species. An intermediate type of elaiophore is reported in some species of Orchidaceae. Regardless of elaiophore type, these glands have similar subcellular features and secretion-release mechanisms. Finally, we note the dearth of information on elaiophore ultrastructure and functioning for several plant families.

  7. Design, fabrication, installation and shielding integrity testing of source storage container for automatic source movement system used in TLD calibration facility

    International Nuclear Information System (INIS)

    Subramanian, V.; Baskar, S.; Annalakshmi, O.; Jose, M.T.; Jayshree, C.P.; Choudry, Shreelatha

    2012-01-01

    A state-of-art TLD laboratory has been commissioned in January 2000 at Radiological Safety Division of Indira Gandhi Centre for Atomic Research (IGCAR). The laboratory provides personnel monitoring service to 2000 occupational workers from Indira Gandhi Centre for Atomic Research and Bhabha Atomic Research Centre facilities. The laboratory has been accredited by the Radiation Safety Systems Division (RSSD), Bhabha Atomic Research Centre (BARC) since year 2002. The laboratory has exclusive facility for the calibration of the TLD cards. As apart of accreditation procedure and taking into account of geometry effect, the dose rate at the card position is determined by the accreditation authorities by using graphite chamber (secondary or national standard instrument) and often re estimated by a condenser R meter (M/s Victoreen, Germany) by our laboratory. As per the regulatory requirement, the exposure protocols should be automated. Towards this an automatic source movement system has been augmented in the calibration facility. By using the system, the source will be brought to the irradiation position by pneumatically and exposures will be terminated by counter, timer and triggering system. To accomplish this task a lead container has been designed, fabricated and mounted at the beneath of the calibration table for the storage of source. As per the automation process, a lead container for the source storage has been designed and installed beneath to the Calibration Table. The container was designed to hold a 3Ci 137 Cs source, but present activity of the source is 1.2Ci. Hence, the shielding integrity was tested with higher active source (1.7Ci 60 Co). The dose rate measured outside on the circumference of the container at the middle of the source is found to be the same as calculated using QAD CGGP calculations. The top plug is so designed to avoid inadvertent upward movement of the source. Though, the shielding was not adequate on top of the top plug, however it does

  8. Consumer-led health-related online sources and their impact on consumers: An integrative review of the literature.

    Science.gov (United States)

    Laukka, Elina; Rantakokko, Piia; Suhonen, Marjo

    2017-04-01

    The aim of the review was to describe consumer-led health-related online sources and their impact on consumers. The review was carried out as an integrative literature review. Quantisation and qualitative content analysis were used as the analysis method. The most common method used by the included studies was qualitative content analysis. This review identified the consumer-led health-related online sources used between 2009 and 2016 as health-related online communities, health-related social networking sites and health-related rating websites. These sources had an impact on peer support; empowerment; health literacy; physical, mental and emotional wellbeing; illness management; and relationships between healthcare organisations and consumers. The knowledge of the existence of the health-related online sources provides healthcare organisations with an opportunity to listen to their consumers' 'voice'. The sources make healthcare consumers more competent actors in relation to healthcare, and the knowledge of them is a valuable resource for healthcare organisations. Additionally, these health-related online sources might create an opportunity to reduce the need for drifting among the healthcare services. Healthcare policymakers and organisations could benefit from having a strategy of increasing their health-related online sources.

  9. Generating millimeter-wave Bessel beam with orbital angular momentum using reflective-type metasurface inherently integrated with source

    Science.gov (United States)

    Shen, Yizhu; Yang, Jiawei; Meng, Hongfu; Dou, Wenbin; Hu, Sanming

    2018-04-01

    Metasurfaces, orbital angular momenta (OAM), and non-diffractive Bessel beams have been attracting worldwide research. Combining the benefits of these three promising techniques, this paper proposes a metasurface-based reflective-type approach to generate a first-order Bessel beam carrying OAM. To validate this approach, a millimeter-wave metasurface is analyzed, designed, fabricated, and measured. Experimental results agree well with simulation. Moreover, this reflective-type metasurface, generating a Bessel beam with OAM, is inherently integrated with a planar feeding source in the same single-layer printed circuit board. Therefore, the proposed design features low profile, low cost, easy integration with front-end active circuits, and no alignment error between the feeding source and the metasurface.

  10. Evaluation of integrity of radiation sources of nuclear gauges; Avaliacao da integridade de fontes radioativas de medidores nucleares

    Energy Technology Data Exchange (ETDEWEB)

    Torohate, Wiclif Francisco

    2016-11-01

    Nuclear equipment meters are mainly used in the industry in quality control and process control. The principle of operation consists in a shielded radioactive source together with a radiation detector such that the radiation interacts with the material to be analyzed before reaching the detector, providing real time data. Can be as their fixed and mobile mobility, the unique properties of ionizing radiation are used in three basic modes, transmission, backscatter or dispersion or induced (reactive). With the advancement and technological modernization in the world, the demand for nuclear gauges becomes increasingly larger. Currently in Brazil there are about 465 process control plants and 21 portable systems and Mozambique about 45 facilities using nuclear gauges. This font registration is done through a process called source inventory that allows also to know the category of the source, the danger or risk to human health that the source offers. The handling of this equipment requires personnel, certified, skilled and well trained in radiation protection area in accordance with the requirements of the various CNEN Rules. Due to the presence of radioactive source and because these devices are used by workers risk because there external radiation. In this context, we made the smear test in two fixed meters from the IRD industry laboratory, which determines the integrity of the source package, mandatory item in periodic integrity testing of the radiation source of this type of device. A set of procedures is made for its implementation as an evaluation of the radiological risk by radiological survey. It was intended to contribute to the learning handling and safe use of these meters. (author)

  11. Taxonomic chauvinism revisited: insight from parental care research.

    Directory of Open Access Journals (Sweden)

    Zachary R Stahlschmidt

    Full Text Available Parental care (any non-genetic contribution by a parent that appears likely to increase the fitness of its offspring is a widespread trait exhibited by a broad range of animal taxa. In addition to influencing the fitness of parent(s and offspring, parental care may be inextricably involved in other evolutionary processes, such as sexual selection and the evolution of endothermy. Yet, recent work has demonstrated that bias related to taxonomy is prevalent across many biological disciplines, and research in parental care may be similarly burdened. Thus, I used parental care articles published in six leading journals of fundamental behavioral sciences (Animal Behaviour, Behavioral Ecology, Behavioral Ecology and Sociobiology, Ethology, Hormones and Behavior, and Physiology & Behavior from 2001-2010 (n = 712 to examine the year-to-year dynamics of two types of bias related to taxonomy across animals: (1 taxonomic bias, which exists when research output is not proportional to the frequency of organisms in nature, and (2 taxonomic citation bias, which is a proxy for the breadth of a given article-specifically, the proportion of articles cited that refer solely to the studied taxon. I demonstrate that research on birds likely represents a disproportionate amount of parental care research and, thus, exhibits taxonomic bias. Parental care research on birds and mammals also refers to a relatively narrow range of taxonomic groups when discussing its context and, thus, exhibits taxonomic citation bias. Further, the levels of taxonomic bias and taxonomic citation bias have not declined over the past decade despite cautionary messages about similar bias in related disciplines--in fact, taxonomic bias may have increased. As in Bonnet et al. (2002, my results should not be interpreted as evidence of an 'ornithological Mafia' conspiring to suppress other taxonomic groups. Rather, I generate several rational hypotheses to determine why bias persists and to

  12. Taxonomic chauvinism revisited: insight from parental care research.

    Science.gov (United States)

    Stahlschmidt, Zachary R

    2011-01-01

    Parental care (any non-genetic contribution by a parent that appears likely to increase the fitness of its offspring) is a widespread trait exhibited by a broad range of animal taxa. In addition to influencing the fitness of parent(s) and offspring, parental care may be inextricably involved in other evolutionary processes, such as sexual selection and the evolution of endothermy. Yet, recent work has demonstrated that bias related to taxonomy is prevalent across many biological disciplines, and research in parental care may be similarly burdened. Thus, I used parental care articles published in six leading journals of fundamental behavioral sciences (Animal Behaviour, Behavioral Ecology, Behavioral Ecology and Sociobiology, Ethology, Hormones and Behavior, and Physiology & Behavior) from 2001-2010 (n = 712) to examine the year-to-year dynamics of two types of bias related to taxonomy across animals: (1) taxonomic bias, which exists when research output is not proportional to the frequency of organisms in nature, and (2) taxonomic citation bias, which is a proxy for the breadth of a given article-specifically, the proportion of articles cited that refer solely to the studied taxon. I demonstrate that research on birds likely represents a disproportionate amount of parental care research and, thus, exhibits taxonomic bias. Parental care research on birds and mammals also refers to a relatively narrow range of taxonomic groups when discussing its context and, thus, exhibits taxonomic citation bias. Further, the levels of taxonomic bias and taxonomic citation bias have not declined over the past decade despite cautionary messages about similar bias in related disciplines--in fact, taxonomic bias may have increased. As in Bonnet et al. (2002), my results should not be interpreted as evidence of an 'ornithological Mafia' conspiring to suppress other taxonomic groups. Rather, I generate several rational hypotheses to determine why bias persists and to guide future

  13. NoSQL data model for semi-automatic integration of ethnomedicinal plant data from multiple sources.

    Science.gov (United States)

    Ningthoujam, Sanjoy Singh; Choudhury, Manabendra Dutta; Potsangbam, Kumar Singh; Chetia, Pankaj; Nahar, Lutfun; Sarker, Satyajit D; Basar, Norazah; Das Talukdar, Anupam

    2014-01-01

    Sharing traditional knowledge with the scientific community could refine scientific approaches to phytochemical investigation and conservation of ethnomedicinal plants. As such, integration of traditional knowledge with scientific data using a single platform for sharing is greatly needed. However, ethnomedicinal data are available in heterogeneous formats, which depend on cultural aspects, survey methodology and focus of the study. Phytochemical and bioassay data are also available from many open sources in various standards and customised formats. To design a flexible data model that could integrate both primary and curated ethnomedicinal plant data from multiple sources. The current model is based on MongoDB, one of the Not only Structured Query Language (NoSQL) databases. Although it does not contain schema, modifications were made so that the model could incorporate both standard and customised ethnomedicinal plant data format from different sources. The model presented can integrate both primary and secondary data related to ethnomedicinal plants. Accommodation of disparate data was accomplished by a feature of this database that supported a different set of fields for each document. It also allowed storage of similar data having different properties. The model presented is scalable to a highly complex level with continuing maturation of the database, and is applicable for storing, retrieving and sharing ethnomedicinal plant data. It can also serve as a flexible alternative to a relational and normalised database. Copyright © 2014 John Wiley & Sons, Ltd.

  14. An integrated and open source GIS environmental management system for a protected area in the south of Portugal

    Science.gov (United States)

    Teodoro, A.; Duarte, L.; Sillero, N.; Gonçalves, J. A.; Fonte, J.; Gonçalves-Seco, L.; Pinheiro da Luz, L. M.; dos Santos Beja, N. M. R.

    2015-10-01

    Herdade da Contenda (HC), located in Moura municipality, Beja district (Alentejo province) in the south of Portugal (southwestern Iberia Peninsula), is a national hunting area with 5270ha. The development of an integrated system that aims to make the management of the natural and cultural heritage resources will be very useful for an effective management of this area. This integrated system should include the physical characterization of the territory, natural conservation, land use and land management themes, as well the cultural heritage resources. This paper presents a new tool for an integrated environmental management system of the HC, which aims to produce maps under a GIS open source environment (QGIS). The application is composed by a single button which opens a window. The window is composed by twelve menus (File, DRASTIC, Forest Fire Risk, Revised Universal Soil Loss Equation (RUSLE), Bioclimatic Index, Cultural Heritage, Fauna and Flora, Ortofoto, Normalizes Difference Vegetation Index (NDVI), Digital Elevation Model (DEM), Land Use Land Cover Cover (LULC) and Help. Several inputs are requires to generate these maps, e.g. DEM, geologic information, soil map, hydraulic conductivity information, LULC map, vulnerability and economic information, NDVI. Six buttons were added to the toolbar which allows to manipulate the information in the map canvas: Zoom in, Zoom out, Pan, Print/Layout and Clear. This integrated and open source GIS environment management system was developed for the HC area, but could be easily adapted to other natural or protected area. Despite the lack of data, the methodology presented fulfills the objectives.

  15. The Skogaryd Research Site - Integration of terrestrial and freshwater greenhouse gas sources and sinks

    Science.gov (United States)

    Klemedtsson, L.

    2012-04-01

    atmosphere. The budgets have ignored dissolved carbon (C) and nitrogen (N) transport in water to streams and lakes and the subsequent exchange between the atmosphere and surface waters. Aquatic habitats can be significant net sources of CO2 and methane (CH4) and potential hot spots for N2O release, all important for natural greenhouse gas (GHG) emissions. Inland waters need to be included in the C and GHG balances for terrestrial landscapes. This project aims to quantify GHG balances at the landscape scale in forested regions that include land-atmosphere, land-water, and water-atmosphere exchange of CO2, CH4 and N2O. Different terrestrial and aquatic ecosystems will be linked holistically, using site specific techniques at different scales, from aircraft (km2) to chambers (m2) to develop integrated models that can be used to quantify net GHG flux for management strategies. The LAGGE project involves six Swedish universities and site is open for more cooperations.

  16. Integration of available regenerative energy sources in community networks for both electricity and heating

    Energy Technology Data Exchange (ETDEWEB)

    Alcalde Melo, Henrique

    2013-03-06

    In the last years, energy prices for German households have been increasing constantly. Some reasons for that include: the dependency of Germany on external fossil fuels to supply its energy demand, the decision to invest in renewable energy generation and to shut down all its nuclear power plants. Nowadays households are already able to generate energy on-site, however the generation potential depends on climatic conditions as well as the specific location and the type of the building. The aim of this work is to evaluate whether a community of new efficient single-family houses can generate enough energy on-site to supply its electricity and heating demand over the year based on renewable energy sources and with the support of energy storage systems, including electric vehicles. The theoretical community is situated in the city of Cottbus, Germany. For this community, an electricity load profile was designed based on the use of common devices and separated in controllable and uncontrollable loads. Electricity is generated on-site through photovoltaic panels and small wind turbines, and the electricity generation potential is evaluated based on the community's available space, which is rather limited, and the actual regulations in the State of Brandenburg. A comparison of the available technologies to supply the heating demand as well as to store energy in the household sector is presented and discussed. It is assumed that each household has an electric vehicle that can be charged and also discharged in the community as an extra energy storage system. A software simulation system was designed with which an energy balance analysis is carried out based on hourly values of supply and demand. Under the assumptions taken for this study, the results of the simulation show that the community is able to generate more energy than consumed throughout a year, however in a few occasions there is not enough energy available to supply the community's energy demand

  17. Integration of renewable energy sources for a sustainable energy policy at Djibouti

    International Nuclear Information System (INIS)

    Aye, Fouad Ahmed

    2009-01-01

    Generally, the predictable exhaustion of the fossil fuels, the necessity of fighting against the global warming, the awareness for the protection of the environment and finally the consideration of the sustainable development in energy policies put the renewable energies in the heart of a strategic stake for the future of our planet. But for the Republic of Djibouti which currently knows an annual economic growth of 3,5 %, it is almost vital to exploit its potential in renewable energies to ensure its economic growth, to realize savings of currencies and to initially achieve the Millennium human development goals whose calendar is fixed at 2015. Unfortunately, the country knows the same energy situation of the countries of sub-Saharan Africa where the energy is plentiful but the electricity is rare. Indeed, the current energy balance of the country is strongly overdrawn. The 97 % of the energy needs of the population (mainly urban in more than 85 %) are satisfied by the imports of oil productions and 90 % of the Djiboutians households use the kerosene as domestic fuel. The cover rate for the electricity network is very low, about 30 %. Only 0,2 % of the electric production (with a total capacity installed of 130 MW) is made from a unique source of renewable energy ( the photovoltaic solar energy). Nevertheless, the country has an important potential in renewable energies. At the level of the photovoltaic solar energy (PV), the technically exploitable solar potential is estimated in 1535 GWh/day. At the level of the wind energy, the estimation of the currently exploitable potential is 8 MW and yet no form of wind energy (whether it is the big or the small wind energy) is exploited in the country. At the level of the geothermal energy, the technically exploitable potential is estimated between 350 and 650 MWe. The economically exploitable potential for the only region of Assal-Ghoubbet is higher than 150 MWe, very widely upper to the current needs of the country. At

  18. Integration of available regenerative energy sources in community networks for both electricity and heating

    Energy Technology Data Exchange (ETDEWEB)

    Alcalde Melo, Henrique

    2013-03-06

    In the last years, energy prices for German households have been increasing constantly. Some reasons for that include: the dependency of Germany on external fossil fuels to supply its energy demand, the decision to invest in renewable energy generation and to shut down all its nuclear power plants. Nowadays households are already able to generate energy on-site, however the generation potential depends on climatic conditions as well as the specific location and the type of the building. The aim of this work is to evaluate whether a community of new efficient single-family houses can generate enough energy on-site to supply its electricity and heating demand over the year based on renewable energy sources and with the support of energy storage systems, including electric vehicles. The theoretical community is situated in the city of Cottbus, Germany. For this community, an electricity load profile was designed based on the use of common devices and separated in controllable and uncontrollable loads. Electricity is generated on-site through photovoltaic panels and small wind turbines, and the electricity generation potential is evaluated based on the community's available space, which is rather limited, and the actual regulations in the State of Brandenburg. A comparison of the available technologies to supply the heating demand as well as to store energy in the household sector is presented and discussed. It is assumed that each household has an electric vehicle that can be charged and also discharged in the community as an extra energy storage system. A software simulation system was designed with which an energy balance analysis is carried out based on hourly values of supply and demand. Under the assumptions taken for this study, the results of the simulation show that the community is able to generate more energy than consumed throughout a year, however in a few occasions there is not enough energy available to supply the community's energy demand. Water can be

  19. Character Selection During Interactive Taxonomic Identification: “Best Characters”

    Directory of Open Access Journals (Sweden)

    Nadia Talent

    2014-03-01

    Full Text Available Software interfaces for interactive multiple-entry taxonomic identification (polyclaves sometimes provide a “best character” or “separation” coefficient, to guide the user to choose a character that could most effectively reduce the number of identification steps required. The coefficient could be particularly helpful when difficult or expensive tasks are needed for forensic identification, and in very large databases, uses that appear likely to increase in importance. Several current systems also provide tools to develop taxonomies or single-entry identification keys, with a variety of coefficients that are appropriate to that purpose. For the identification task, however, information theory neatly applies, and provides the most appropriate coefficient. To our knowledge, Delta-Intkey is the only currently available system that uses a coefficient related to information theory, and it is currently being reimplemented, which may allow for improvement. We describe two improvements to the algorithm used by Delta-Intkey. The first improves transparency as the number of remaining taxa decreases, by normalizing the range of the coefficient to [0,1]. The second concerns numeric ranges, which require consistent treatment of sub-intervals and their end-points. A stand-alone Bestchar program for categorical data is provided, in the Python and R languages. The source code is freely available and dedicated to the Public Domain.

  20. Taxonomic and chemical assessment of exceptionally abundant rock mine biofilm

    Directory of Open Access Journals (Sweden)

    Karolina Tomczyk-Żak

    2017-08-01

    Full Text Available Background An exceptionally thick biofilm covers walls of ancient gold and arsenic Złoty Stok mine (Poland in the apparent absence of organic sources of energy. Methods and Results We have characterized this microbial community using culture-dependent and independent methods. We sequenced amplicons of the 16S rRNA gene obtained using generic primers and additional primers targeted at Archaea and Actinobacteria separately. Also, we have cultured numerous isolates from the biofilm on different media under aerobic and anaerobic conditions. We discovered very high biodiversity, and no single taxonomic group was dominant. The majority of almost 4,000 OTUs were classified above genus level indicating presence of novel species. Elemental analysis, performed using SEM-EDS and X-ray, of biofilm samples showed that carbon, sulphur and oxygen were not evenly distributed in the biofilm and that their presence is highly correlated. However, the distribution of arsenic and iron was more flat, and numerous intrusions of elemental silver and platinum were noted, indicating that microorganisms play a key role in releasing these elements from the rock. Conclusions Altogether, the picture obtained throughout this study shows a very rich, complex and interdependent system of rock biofilm. The chemical heterogeneity of biofilm is a likely explanation as to why this oligotrophic environment is capable of supporting such high microbial diversity.

  1. The source apportionment of carbonaceous combustion products by micro-radiocarbon measurements for the integrated air cancer project (IACP)

    International Nuclear Information System (INIS)

    Klouda, G.A.; Currie, L.A.; Sheffield, A.E.; Wise, S.A.; Benner, B.A.; Stevens, R.K.; Merrill, R.G.

    1987-01-01

    Atmospheric particle samples were collected during the winter of 1984-1985 in Albuquerque, NM and Raleigh, NC by the EPA for the Integrated Air Cancer Project (IACP). Selected chemical fractions were analyzed for /sup 14/C to apportion mobile (motor vehicles) and stationary (residential wood combustion) sources. In addition, these results were used to validate the EPA Single Tracer Regression Model (STRM), also a technique for the source apportionment of aerosols. Preliminary /sup 14/C results for the Albuquerque residential site at night showed 79% Contemporary Carbon (CC) compared to 95% CC for Raleight at night for the total carbon; 88% and 94% of the total-C was organic, respectively. The Albuquerque traffic site during the day showed 1.4 to 3.9 times less CC compared to the daytime residential site for total-C. The elemental carbon fraction in all cases showed a lower percentage of contemporary carbon than the total carbon, which indicates that this chemical fraction may be an excellent tracer of mobile sources. These results are consistent with a daytime mobile source at the traffic site and a nighttime Residential Wood Combustion (RWC) source at the residential site. Also, the results from the EPA STRM technique for this study were in good agreement with those obtained by the /sup 14/C Direct Tracer (/sup 14/C-DT) technique for source apportionment of these aerosols

  2. Commutativity of the source generation procedure and integrable semi-discretizations: the two-dimensional Leznov lattice

    International Nuclear Information System (INIS)

    Hu Juan; Yu Guofu; Tam, Hon-Wah

    2012-01-01

    The source generation procedure (SGP) is applied to a y-directional discrete version and an x-directional discrete version of the Leznov lattice. Consequently, a y-discrete Leznov lattice equation with self-consistent sources (y-discrete Leznov ESCS) and an x-discrete Leznov ESCS are presented. Also utilizing the SGP, a new type of Leznov lattice equation with self-consistent sources (new Leznov ESCS) is derived. It is interesting that the two semi-discrete Leznov ESCS produced constitute a y-discretization for the Leznov ESCS given by Wang et al (2007 J. Phys. A: Math. Theor. 40 12691) and an x-discretization for the new Leznov ESCS, respectively. This means that the commutativity of SGP and integrable semi-discretizations is valid for the two-dimensional Leznov lattice equation. (paper)

  3. Investigation of Near-Field Electromagnetic Source Imaging Using Inverse Green's Function Integrations

    National Research Council Canada - National Science Library

    Steenman, Daryl

    1999-01-01

    .... In the far-field of these tested objects, actual sources of high reflectivity or "Hot Spots" on the tested objects can be isolated to within only one half the wavelength of the electromagnetic wave used for testing...

  4. Integrated analysis of multiple data sources reveals modular structure of biological networks

    International Nuclear Information System (INIS)

    Lu Hongchao; Shi Baochen; Wu Gaowei; Zhang Yong; Zhu Xiaopeng; Zhang Zhihua; Liu Changning; Zhao, Yi; Wu Tao; Wang Jie; Chen Runsheng

    2006-01-01

    It has been a challenging task to integrate high-throughput data into investigations of the systematic and dynamic organization of biological networks. Here, we presented a simple hierarchical clustering algorithm that goes a long way to achieve this aim. Our method effectively reveals the modular structure of the yeast protein-protein interaction network and distinguishes protein complexes from functional modules by integrating high-throughput protein-protein interaction data with the added subcellular localization and expression profile data. Furthermore, we take advantage of the detected modules to provide a reliably functional context for the uncharacterized components within modules. On the other hand, the integration of various protein-protein association information makes our method robust to false-positives, especially for derived protein complexes. More importantly, this simple method can be extended naturally to other types of data fusion and provides a framework for the study of more comprehensive properties of the biological network and other forms of complex networks

  5. Scheduling Model for Renewable Energy Sources Integration in an Insular Power System

    Directory of Open Access Journals (Sweden)

    Gerardo J. Osório

    2018-01-01

    Full Text Available Insular power systems represent an asset and an excellent starting point for the development and analysis of innovative tools and technologies. The integration of renewable energy resources that has taken place in several islands in the south of Europe, particularly in Portugal, has brought more uncertainty to production management. In this work, an innovative scheduling model is proposed, which considers the integration of wind and solar resources in an insular power system in Portugal, with a strong conventional generation basis. This study aims to show the benefits of increasing the integration of renewable energy resources in this insular power system, and the objectives are related to minimizing the time for which conventional generation is in operation, maximizing profits, reducing production costs, and consequently, reducing greenhouse gas emissions.

  6. Integration of Multiple Data Sources for predicting the Engagement of Students in Practical Activities

    Directory of Open Access Journals (Sweden)

    Llanos Tobarra

    2014-09-01

    Full Text Available This work presents the integration of an automatic assessment system for virtual/remote laboratories and the institutional Learning Management System (LMS, in order to analyze the students’ progress and their collaborative learning in virtual/remote laboratories. As a result of this integration, it is feasible to extract useful information for the characterization of the students’ learning process and detecting the students’ engagement with the practical activities of our subjects. From this integration, a dashboard has been created to graphically present to lecturers the analyzed results. Thanks to this, faculty can use the analyzed information in order to guide the learning/teaching process of each student. As an example, a subject focused on the configuration of network services has been chosen to implement our proposal.

  7. Taxonomic and phylogenetic utility of variation in advertising calls of ...

    African Journals Online (AJOL)

    Taxonomic and phylogenetic utility of variation in advertising calls of francolins and spurfowls (Galliformes: Phasianidae). Tshifhiwa G. Mandiwana-Neudani, Rauri C.K. Bowie, Martine Hausberger, Laurence Henry, Timothy M. Crowe ...

  8. Wide-band continuous-wave terahertz source with a vertically integrated photomixer

    Science.gov (United States)

    Peytavit, E.; Lampin, J.-F.; Hindle, F.; Yang, C.; Mouret, G.

    2009-10-01

    A transverse electromagnetic horn antenna is monolithically integrated with a low temperature grown GaAs vertical photodetector on a silicon substrate forming a vertically integrated photomixer. Continuous-wave terahertz radiation is generated at frequencies up to 3.5 THz with a power level reaching 20 nW around 3 THz. Microwave and material concepts allow both qualitative and quantitative explanations of the experimental results. The thin film microstrip line topology has been adapted for active devices by an Au-Au thermocompression layer transfer technique and seems to be a promising generic tool for a new generation of efficient terahertz devices.

  9. Integrated Characterization of DNAPL Source Zone Architecture in Clay Till and Limestone Bedrock

    DEFF Research Database (Denmark)

    Broholm, Mette Martina; Janniche, Gry Sander; Fjordbøge, Annika Sidelmann

    2014-01-01

    Background/Objectives. Characterization of dense non-aqueous phase liquid (DNAPL) source zone architecture is essential to develop accurate site specific conceptual models, delineate and quantify contaminant mass, perform risk assessment, and select and design remediation alternatives. The activi......Background/Objectives. Characterization of dense non-aqueous phase liquid (DNAPL) source zone architecture is essential to develop accurate site specific conceptual models, delineate and quantify contaminant mass, perform risk assessment, and select and design remediation alternatives...... innovative investigation methods and characterize the source zone hydrogeology and contamination to obtain an improved conceptual understanding of DNAPL source zone architecture in clay till and bryozoan limestone bedrock. Approach/Activities. A wide range of innovative and current site investigative tools...... for direct and indirect documentation and/or evaluation of DNAPL presence were combined in a multiple lines of evidence approach. Results/Lessons Learned. Though no single technique was sufficient for characterization of DNAPL source zone architecture, the combined use of membrane interphase probing (MIP...

  10. Molecular taxonomic, epidemiological and population genetic ...

    African Journals Online (AJOL)

    . The major limitation to the profitable and sustainable production of D. alata is its susceptibility to anthracnose disease. The availability of resistant varieties could potentially form the cornerstone of an integrated management strategy for yam ...

  11. Campus and community micro grids integration of building integrated photovoltaic renewable energy sources: Case study of Split 3 area, Croatia - part A

    Directory of Open Access Journals (Sweden)

    Gašparović Goran

    2016-01-01

    Full Text Available Micro grids interconnect loads and distributed energy resources as a single controllable entity. New installations of renewable energy sources (RES in urban areas, such as Building Integrated Photovoltaic (BIPV, provide opportunities to increase energy independence and diversify energy sources in the energy system. This paper explores the integration of RES into two case study communities in an urban agglomeration to provide optimal conditions to meet a share of the electrical loads. Energy planning case studies for decentralized generation of renewable energy are conducted in H2RES energy planning software for hourly energy balances. The results indicate that BIPV and PV in the case study communities can cover about 17% of the recorded electrical demand of both areas. On a yearly basis, there will be a 0.025 GWh surplus of PV production with a maximum value of 1.25 MWh in one hour of operation unless grid storage is used. This amounts to a total investment cost of 13.36 million EUR. The results are useful for proposing future directions for the various case study communities targeting sustainable development.

  12. An Integrated Approach for Visual Analysis of a Multi-Source Moving Objects Knowledge Base

    NARCIS (Netherlands)

    Willems, C.M.E.; van Hage, W.R.; de Vries, G.K.D.; Janssens, J.; Malaisé, V.

    2010-01-01

    We present an integrated and multidisciplinary approach for analyzing the behavior of moving objects. The results originate from an ongoing research of four different partners from the Dutch Poseidon project (Embedded Systems Institute (2007)), which aims to develop new methods for Maritime Safety

  13. An integrated approach for visual analysis of a multi-source moving objects knowledge base

    NARCIS (Netherlands)

    Willems, N.; Hage, van W.R.; Vries, de G.; Janssens, J.H.M.; Malaisé, V.

    2010-01-01

    We present an integrated and multidisciplinary approach for analyzing the behavior of moving objects. The results originate from an ongoing research of four different partners from the Dutch Poseidon project (Embedded Systems Institute (2007)), which aims to develop new methods for Maritime Safety

  14. Integration of single-photon sources and detectors on GaAs

    NARCIS (Netherlands)

    Digeronimo, G.E.; Petruzzella, Maurangelo; Birindelli, Simone; Gaudio, Rosalinda; Poor, Sartoon Fattah; van Otten, Frank W.M.; Fiore, Andrea

    2016-01-01

    Quantum photonic integrated circuits (QPICs) on a GaAs platform allow the generation, manipulation, routing, and detection of non-classical states of light, which could pave the way for quantum information processing based on photons. In this article, the prototype of a multi-functional QPIC is

  15. Market integration among electricity markets and their major fuel source markets

    International Nuclear Information System (INIS)

    Mjelde, James W.; Bessler, David A.

    2009-01-01

    Dynamic price information flows among U.S. electricity wholesale spot prices and the prices of the major electricity generation fuel sources, natural gas, uranium, coal, and crude oil, are studied. Multivariate time series methods applied to weekly price data show that in contemporaneous time peak electricity prices move natural gas prices, which in turn influence crude oil. In the long run, price is discovered in the fuel sources market (except uranium), as these prices are weakly exogenous in a reduced rank regression representation of these energy prices.

  16. Forked and Integrated Variants In An Open-Source Firmware Project

    DEFF Research Database (Denmark)

    Stanciulescu, Stefan; Schulze, Sandro; Wasowski, Andrzej

    2015-01-01

    and interactive source management platforms such as Github. We study advantages and disadvantages of forking using the case of Marlin, an open source firmware for 3D printers. We find that many problems and advantages of cloning do translate to forking. Interestingly, the Marlin community uses both forking......Code cloning has been reported both on small (code fragments) and large (entire projects) scale. Cloning-in-the-large, or forking, is gaining ground as a reuse mechanism thanks to availability of better tools for maintaining forked project variants, hereunder distributed version control systems...

  17. Scenario driven data modelling: a method for integrating diverse sources of data and data streams

    Science.gov (United States)

    2011-01-01

    Background Biology is rapidly becoming a data intensive, data-driven science. It is essential that data is represented and connected in ways that best represent its full conceptual content and allows both automated integration and data driven decision-making. Recent advancements in distributed multi-relational directed graphs, implemented in the form of the Semantic Web make it possible to deal with complicated heterogeneous data in new and interesting ways. Results This paper presents a new approach, scenario driven data modelling (SDDM), that integrates multi-relational directed graphs with data streams. SDDM can be applied to virtually any data integration challenge with widely divergent types of data and data streams. In this work, we explored integrating genetics data with reports from traditional media. SDDM was applied to the New Delhi metallo-beta-lactamase gene (NDM-1), an emerging global health threat. The SDDM process constructed a scenario, created a RDF multi-relational directed graph that linked diverse types of data to the Semantic Web, implemented RDF conversion tools (RDFizers) to bring content into the Sematic Web, identified data streams and analytical routines to analyse those streams, and identified user requirements and graph traversals to meet end-user requirements. Conclusions We provided an example where SDDM was applied to a complex data integration challenge. The process created a model of the emerging NDM-1 health threat, identified and filled gaps in that model, and constructed reliable software that monitored data streams based on the scenario derived multi-relational directed graph. The SDDM process significantly reduced the software requirements phase by letting the scenario and resulting multi-relational directed graph define what is possible and then set the scope of the user requirements. Approaches like SDDM will be critical to the future of data intensive, data-driven science because they automate the process of converting

  18. Integrating intermittent energy sources in liberalized electricity markets: from technical costs to economic penalties as a result of market rules

    International Nuclear Information System (INIS)

    Menanteau, Ph.; Finon, D.; Lamy, M.L.

    2003-06-01

    With the aim of preventing climatic change and ensuring the security of energy supplies, the recent European Directive on renewable energy production sources is aimed at bringing about a very substantial increase in electricity production from renewable sources in Europe by the 2010 horizon. Generally speaking, production of electricity from renewable sources will be assured by biomass and wind, and to a lesser extent by micro hydro, technologies whose characteristics are very different from the point of view of their integration into the electricity system. Their inclusion in the electricity systems will cause problems because of the intermittent nature of the production, a factor that does not enter into the paradigms of producers, system operators or regulators. The problems raised by the integration of intermittent production are technical in nature (risk of non-availability in peak periods, the need for additional reserves) and will incur adjustment costs, but the way in which the electricity markets function will impose economic penalties generally more substantial than the added technical costs. In this paper are examined in succession: (i) the additional costs raised by intermittence; (ii) the economic penalties imposed by the operating rules of de-regulated electricity markets with electricity production from renewable sources included, with particular reference to the case of the British and Nordic markets; and (iii) an analysis of the options that could limit the gap between the additional cost of intermittent production for the system and the adjustment surcharges imposed by the electricity markets, with the aim of reducing the tension between the deregulation of the electricity market and promoting the development of renewable energy sources. (A.L.B.)

  19. Pulseq-Graphical Programming Interface: Open source visual environment for prototyping pulse sequences and integrated magnetic resonance imaging algorithm development.

    Science.gov (United States)

    Ravi, Keerthi Sravan; Potdar, Sneha; Poojar, Pavan; Reddy, Ashok Kumar; Kroboth, Stefan; Nielsen, Jon-Fredrik; Zaitsev, Maxim; Venkatesan, Ramesh; Geethanath, Sairam

    2018-03-11

    To provide a single open-source platform for comprehensive MR algorithm development inclusive of simulations, pulse sequence design and deployment, reconstruction, and image analysis. We integrated the "Pulseq" platform for vendor-independent pulse programming with Graphical Programming Interface (GPI), a scientific development environment based on Python. Our integrated platform, Pulseq-GPI, permits sequences to be defined visually and exported to the Pulseq file format for execution on an MR scanner. For comparison, Pulseq files using either MATLAB only ("MATLAB-Pulseq") or Python only ("Python-Pulseq") were generated. We demonstrated three fundamental sequences on a 1.5 T scanner. Execution times of the three variants of implementation were compared on two operating systems. In vitro phantom images indicate equivalence with the vendor supplied implementations and MATLAB-Pulseq. The examples demonstrated in this work illustrate the unifying capability of Pulseq-GPI. The execution times of all the three implementations were fast (a few seconds). The software is capable of user-interface based development and/or command line programming. The tool demonstrated here, Pulseq-GPI, integrates the open-source simulation, reconstruction and analysis capabilities of GPI Lab with the pulse sequence design and deployment features of Pulseq. Current and future work includes providing an ISMRMRD interface and incorporating Specific Absorption Ratio and Peripheral Nerve Stimulation computations. Copyright © 2018 Elsevier Inc. All rights reserved.

  20. Integrating the Toda Lattice with Self-Consistent Source via Inverse Scattering Method

    International Nuclear Information System (INIS)

    Urazboev, Gayrat

    2012-01-01

    In this work, there is shown that the solutions of Toda lattice with self-consistent source can be found by the inverse scattering method for the discrete Sturm-Liuville operator. For the considered problem the one-soliton solution is obtained.

  1. INTEGRAL discovered a new hard X-ray source: IGRJ17511-3057

    DEFF Research Database (Denmark)

    Baldovin, C.; Kuulkers, E.; Ferrigno, C.

    2009-01-01

    with a significance of 14 sigma in the 20-40 keV energy band, and 7 sigma in the 40-80 keV energy band. The corresponding count rates in these bands are 4.2+/0.3 cts/s (28 mCrab) and 1.8+/-0.3 cts/s (25 mCrab), respectively. The source is also detected in the JEM-X mosaic in the three energy bands 3-7 keV, 7-11 ke......V, and 11-20 keV. The source flux is ~20 mCrab and the detection significance is 3 sigma in all bands. The best determined source position is RA: 267.811 DEC: -30.954 (J2000), with a 90% error radius of 2.0 arcmin. The combined IBIS/ISGRI and JEM-X spectrum in the 3-100 keV energy range is well described...... by a single power-law with photon index 2.0+/-0.2. The source flux is 5.7e-10 erg/cm2/s in the 3-20 keV energy band and 4.8e-10 erg/cm2/s in the 20-100 keV energy band....

  2. Ontology-Based Data Integration of Open Source Electronic Medical Record and Data Capture Systems

    Science.gov (United States)

    Guidry, Alicia F.

    2013-01-01

    In low-resource settings, the prioritization of clinical care funding is often determined by immediate health priorities. As a result, investment directed towards the development of standards for clinical data representation and exchange are rare and accordingly, data management systems are often redundant. Open-source systems such as OpenMRS and…

  3. Capturing microbial sources distributed in a mixed-use watershed within an integrated environmental modeling workflow

    Science.gov (United States)

    Many watershed models simulate overland and instream microbial fate and transport, but few provide loading rates on land surfaces and point sources to the waterbody network. This paper describes the underlying equations for microbial loading rates associated with 1) land-applied ...

  4. Using Remote Sensing Data for Integrating different Renewable Energy Sources at Coastal Site in South Italy

    DEFF Research Database (Denmark)

    Calaudi, Rosamaria; Feudo, Teresa Lo; Calidonna, Claudia Roberta

    2016-01-01

    Italian coastal sites have the advantage of favorable climatic conditions to use mixed renewable energy sources, such as solar and wind. Harbors are safe places to install wind turbines where wind conditions are almost offshore. Space-borne remote sensing can provide information to determine solar...

  5. Assessment of source-receptor relationships of aerosols: An integrated forward and backward modeling approach

    Science.gov (United States)

    Kulkarni, Sarika

    This dissertation presents a scientific framework that facilitates enhanced understanding of aerosol source -- receptor (S/R) relationships and their impact on the local, regional and global air quality by employing a complementary suite of modeling methods. The receptor -- oriented Positive Matrix Factorization (PMF) technique is combined with Potential Source Contribution Function (PSCF), a trajectory ensemble model, to characterize sources influencing the aerosols measured at Gosan, Korea during spring 2001. It is found that the episodic dust events originating from desert regions in East Asia (EA) that mix with pollution along the transit path, have a significant and pervasive impact on the air quality of Gosan. The intercontinental and hemispheric transport of aerosols is analyzed by a series of emission perturbation simulations with the Sulfur Transport and dEposition Model (STEM), a regional scale Chemical Transport Model (CTM), evaluated with observations from the 2008 NASA ARCTAS field campaign. This modeling study shows that pollution transport from regions outside North America (NA) contributed ˜ 30 and 20% to NA sulfate and BC surface concentration. This study also identifies aerosols transported from Europe, NA and EA regions as significant contributors to springtime Arctic sulfate and BC. Trajectory ensemble models are combined with source region tagged tracer model output to identify the source regions and possible instances of quasi-lagrangian sampled air masses during the 2006 NASA INTEX-B field campaign. The impact of specific emission sectors from Asia during the INTEX-B period is studied with the STEM model, identifying residential sector as potential target for emission reduction to combat global warming. The output from the STEM model constrained with satellite derived aerosol optical depth and ground based measurements of single scattering albedo via an optimal interpolation assimilation scheme is combined with the PMF technique to

  6. Integration

    DEFF Research Database (Denmark)

    Emerek, Ruth

    2004-01-01

    Bidraget diskuterer de forskellige intergrationsopfattelse i Danmark - og hvad der kan forstås ved vellykket integration......Bidraget diskuterer de forskellige intergrationsopfattelse i Danmark - og hvad der kan forstås ved vellykket integration...

  7. Optimal Operation of the Integrated Electrical and Heating Systems to Accommodate the Intermittent Renewable Sources

    DEFF Research Database (Denmark)

    Li, Jinghua; Fang, Jiakun; Zeng, Qing

    2016-01-01

    The integration of electrical and heating systems has great potential to enhance the flexibility of power systems to accommodate more renewable power such as the wind and solar. This study was to investigate an optimal way to integrate the energy of both systems in urban areas. The amount of energy...... the effectiveness of the proposed solution. The results showed that coordinated optimization of the energy distribution have significant benefits for reducing wind curtailment, operation cost, and energy losses. The proposed model and methodology could help system operators with decision support in the emerging...... conversion between the electrical system and heating system was optimally decided so that the demand within both systems could be met at the least operational cost. Besides, the best node to join with the electrical system and heating system was chosen by consideration of the energy transmission loss...

  8. Analysis of hard X-ray emission from selected very high energy {gamma}-ray sources observed with INTEGRAL

    Energy Technology Data Exchange (ETDEWEB)

    Hoffmann, Agnes Irene Dorothee

    2009-11-13

    A few years ago, the era of very high energy {gamma}-ray astronomy started, when the latest generation of Imaging Atmospheric Cherenkov Telescopes (IACT) like H.E.S.S. began to operate and to resolve the sources of TeV emission. Identifications via multi-wavelength studies reveal that the detected sources are supernova remnants and active galactic nuclei, but also pulsar wind nebulae and a few binaries. One widely discussed open question is, how these sources are able to accelerate particles to such high energies. The understanding of the underlying particle distribution, the acceleration processes taking place, and the knowledge of the radiation processes which produce the observed emission, is, therefore, of crucial interest. Observations in the hard X-ray domain can be a key to get information on these particle distributions and processes. Important for this thesis are the TeV and the hard X-ray range. The two instruments, H.E.S.S. and INTEGRAL, whose data were used, are, therefore, described in detail. The main part of this thesis is focused on the X-ray binary system LS 5039/RX J1826.2-1450. It was observed in several energy ranges. The nature of the compact object is still not known, and it was proposed either to be a microquasar system or a non-accreting pulsar system. The observed TeV emission is modulated with the orbital cycle. Several explanations for this variability have been discussed in recent years. The observations with INTEGRAL presented in this thesis have provided new information to solve this question. Therefore, a search for a detection in the hard X-ray range and for its orbital dependence was worthwhile. Since LS 5039 is a faint source and the sky region where it is located is crowded, a very careful, non-standard handling of the INTEGRAL data was necessary, and a cross-checking with other analysis methods was essential to provide reliable results. We found that LS 5039 is emitting in the hard X-ray energy range. A flux rate and an upper

  9. Analysis of hard X-ray emission from selected very high energy γ-ray sources observed with INTEGRAL

    International Nuclear Information System (INIS)

    Hoffmann, Agnes Irene Dorothee

    2009-01-01

    A few years ago, the era of very high energy γ-ray astronomy started, when the latest generation of Imaging Atmospheric Cherenkov Telescopes (IACT) like H.E.S.S. began to operate and to resolve the sources of TeV emission. Identifications via multi-wavelength studies reveal that the detected sources are supernova remnants and active galactic nuclei, but also pulsar wind nebulae and a few binaries. One widely discussed open question is, how these sources are able to accelerate particles to such high energies. The understanding of the underlying particle distribution, the acceleration processes taking place, and the knowledge of the radiation processes which produce the observed emission, is, therefore, of crucial interest. Observations in the hard X-ray domain can be a key to get information on these particle distributions and processes. Important for this thesis are the TeV and the hard X-ray range. The two instruments, H.E.S.S. and INTEGRAL, whose data were used, are, therefore, described in detail. The main part of this thesis is focused on the X-ray binary system LS 5039/RX J1826.2-1450. It was observed in several energy ranges. The nature of the compact object is still not known, and it was proposed either to be a microquasar system or a non-accreting pulsar system. The observed TeV emission is modulated with the orbital cycle. Several explanations for this variability have been discussed in recent years. The observations with INTEGRAL presented in this thesis have provided new information to solve this question. Therefore, a search for a detection in the hard X-ray range and for its orbital dependence was worthwhile. Since LS 5039 is a faint source and the sky region where it is located is crowded, a very careful, non-standard handling of the INTEGRAL data was necessary, and a cross-checking with other analysis methods was essential to provide reliable results. We found that LS 5039 is emitting in the hard X-ray energy range. A flux rate and an upper flux

  10. Integration of Single-Photon Sources and Detectors on GaAs

    Directory of Open Access Journals (Sweden)

    Giulia Enrica Digeronimo

    2016-10-01

    Full Text Available Quantum photonic integrated circuits (QPICs on a GaAs platform allow the generation, manipulation, routing, and detection of non-classical states of light, which could pave the way for quantum information processing based on photons. In this article, the prototype of a multi-functional QPIC is presented together with our recent achievements in terms of nanofabrication and integration of each component of the circuit. Photons are generated by excited InAs quantum dots (QDs and routed through ridge waveguides towards photonic crystal cavities acting as filters. The filters with a transmission of 20% and free spectral range ≥66 nm are able to select a single excitonic line out of the complex emission spectra of the QDs. The QD luminescence can be measured by on-chip superconducting single photon detectors made of niobium nitride (NbN nanowires patterned on top of a suspended nanobeam, reaching a device quantum efficiency up to 28%. Moreover, two electrically independent detectors are integrated on top of the same nanobeam, resulting in a very compact autocorrelator for on-chip g(2(τ measurements.

  11. Community Response to Multiple Sound Sources: Integrating Acoustic and Contextual Approaches in the Analysis

    Directory of Open Access Journals (Sweden)

    Peter Lercher

    2017-06-01

    Full Text Available Sufficient data refer to the relevant prevalence of sound exposure by mixed traffic sources in many nations. Furthermore, consideration of the potential effects of combined sound exposure is required in legal procedures such as environmental health impact assessments. Nevertheless, current practice still uses single exposure response functions. It is silently assumed that those standard exposure-response curves accommodate also for mixed exposures—although some evidence from experimental and field studies casts doubt on this practice. The ALPNAP-study population (N = 1641 shows sufficient subgroups with combinations of rail-highway, highway-main road and rail-highway-main road sound exposure. In this paper we apply a few suggested approaches of the literature to investigate exposure-response curves and its major determinants in the case of exposure to multiple traffic sources. Highly/moderate annoyance and full scale mean annoyance served as outcome. The results show several limitations of the current approaches. Even facing the inherent methodological limitations (energy equivalent summation of sound, rating of overall annoyance the consideration of main contextual factors jointly occurring with the sources (such as vibration, air pollution or coping activities and judgments of the wider area soundscape increases the variance explanation from up to 8% (bivariate, up to 15% (base adjustments up to 55% (full contextual model. The added predictors vary significantly, depending on the source combination. (e.g., significant vibration effects with main road/railway, not highway. Although no significant interactions were found, the observed additive effects are of public health importance. Especially in the case of a three source exposure situation the overall annoyance is already high at lower levels and the contribution of the acoustic indicators is small compared with the non-acoustic and contextual predictors. Noise mapping needs to go down to

  12. The first neural probe integrated with light source (blue laser diode) for optical stimulation and electrical recording.

    Science.gov (United States)

    Park, HyungDal; Shin, Hyun-Joon; Cho, Il-Joo; Yoon, Eui-sung; Suh, Jun-Kyo Francis; Im, Maesoon; Yoon, Euisik; Kim, Yong-Jun; Kim, Jinseok

    2011-01-01

    In this paper, we report a neural probe which can selectively stimulate target neurons optically through Si wet etched mirror surface and record extracellular neural signals in iridium oxide tetrodes. Consequently, the proposed approach provides to improve directional problem and achieve at least 150/m gap distance between stimulation and recording sites by wet etched mirror surface in V-groove. Also, we developed light source, blue laser diode (OSRAM Blue Laser Diode_PL 450), integration through simple jig for one-touch butt-coupling. Furthermore, optical power and impedance of iridium oxide tetrodes were measured as 200 μW on 5 mW from LD and 206.5 k Ω at 1 kHz and we demonstrated insertion test of probe in 0.5% agarose-gel successfully. We have successfully transmitted a light of 450 nm to optical fiber through the integrated LD using by butt-coupling method.

  13. Barcoding snakeheads (Teleostei, Channidae) revisited: Discovering greater species diversity and resolving perpetuated taxonomic confusions

    Science.gov (United States)

    Conte-Grand, Cecilia; Britz, Ralf; Dahanukar, Neelesh; Raghavan, Rajeev; Pethiyagoda, Rohan; Tan, Heok Hui; Hadiaty, Renny K.; Yaakob, Norsham S.

    2017-01-01

    Snakehead fishes of the family Channidae are predatory freshwater teleosts from Africa and Asia comprising 38 valid species. Snakeheads are important food fishes (aquaculture, live food trade) and have been introduced widely with several species becoming highly invasive. A channid barcode library was recently assembled by Serrao and co-workers to better detect and identify potential and established invasive snakehead species outside their native range. Comparing our own recent phylogenetic results of this taxonomically confusing group with those previously reported revealed several inconsistencies that prompted us to expand and improve on previous studies. By generating 343 novel snakehead coxI sequences and combining them with an additional 434 coxI sequences from GenBank we highlight several problems with previous efforts towards the assembly of a snakehead reference barcode library. We found that 16.3% of the channid coxI sequences deposited in GenBank are based on misidentifications. With the inclusion of our own data we were, however, able to solve these cases of perpetuated taxonomic confusion. Different species delimitation approaches we employed (BIN, GMYC, and PTP) were congruent in suggesting a potentially much higher species diversity within snakeheads than currently recognized. In total, 90 BINs were recovered and within a total of 15 currently recognized species multiple BINs were identified. This higher species diversity is mostly due to either the incorporation of undescribed, narrow range, endemics from the Eastern Himalaya biodiversity hotspot or the incorporation of several widespread species characterized by deep genetic splits between geographically well-defined lineages. In the latter case, over-lumping in the past has deflated the actual species numbers. Further integrative approaches are clearly needed for providing a better taxonomic understanding of snakehead diversity, new species descriptions and taxonomic revisions of the group. PMID

  14. Integration of highly probabilistic sources into optical quantum architectures: perpetual quantum computation

    International Nuclear Information System (INIS)

    Devitt, Simon J; Stephens, Ashley M; Munro, William J; Nemoto, Kae

    2011-01-01

    In this paper, we introduce a design for an optical topological cluster state computer constructed exclusively from a single quantum component. Unlike previous efforts we eliminate the need for on demand, high fidelity photon sources and detectors and replace them with the same device utilized to create photon/photon entanglement. This introduces highly probabilistic elements into the optical architecture while maintaining complete specificity of the structure and operation for a large-scale computer. Photons in this system are continually recycled back into the preparation network, allowing for an arbitrarily deep three-dimensional cluster to be prepared using a comparatively small number of photonic qubits and consequently the elimination of high-frequency, deterministic photon sources.

  15. Analysis of aCGH Integrating Different Sources of Information by Means of a CBR

    OpenAIRE

    Zato Domínguez, Carolina; de Paz Santana, Juan F.; Bajo Pérez, Javier; Corchado Rodríguez, Juan M.

    2011-01-01

    Knowledge management is a key element in medical environments. Arrays CGH make possible the realization of tests on patients for the detection of mutations in chromosomal regions. The detection of the regions with mutations associated to different pathologies is an important step for the selection of relevant genes, proteins or diseases. The corresponding information of the mutations and genes is distributed in dif- ferent public sources and databases, so it is necessary the use of systems th...

  16. Open-Source Integrated Design-Analysis Environment For Nuclear Energy Advanced Modeling & Simulation Final Scientific/Technical Report

    Energy Technology Data Exchange (ETDEWEB)

    O' Leary, Patrick [Kitware, Inc., Clifton Park, NY (United States)

    2017-01-30

    The framework created through the Open-Source Integrated Design-Analysis Environment (IDAE) for Nuclear Energy Advanced Modeling & Simulation grant has simplify and democratize advanced modeling and simulation in the nuclear energy industry that works on a range of nuclear engineering applications. It leverages millions of investment dollars from the Department of Energy's Office of Nuclear Energy for modeling and simulation of light water reactors and the Office of Nuclear Energy's research and development. The IDEA framework enhanced Kitware’s Computational Model Builder (CMB) while leveraging existing open-source toolkits and creating a graphical end-to-end umbrella guiding end-users and developers through the nuclear energy advanced modeling and simulation lifecycle. In addition, the work deliver strategic advancements in meshing and visualization for ensembles.

  17. DETECTION OF THE NITRATE POLLUTION SOURCES IN SHALLOW AQUIFER, USING INTEGRATION OF RS&GIS WITH STABLE ISOTOPES TECHNOLOGIES

    Directory of Open Access Journals (Sweden)

    N. B. I. Shakak

    2018-04-01

    Full Text Available Geographical information system (GIS and remote sensing technique is a tool which is used for acquiring data from space, storing, analyzing and displaying spatial data, also can use for investigating source of environmental pollution which is affect health. Sudan landsat mosaic image which acquired in 2013 was used in this study to develop land use and land cover maps for tow selected study area, Khartoum urban area, and Bara locality in North kordofan state western Sudan. The main objective to assess the source of Nitrate pollution in shallow aquifer. ERDAS software was used to create land cover-land use maps for the study areas. For Khartoum town we used land sat mosaic image which acquire in 2013, and used supervised classification which more closely controlled than unsupervised. In this process, we select pixel that represent patterns you recognized or can identify with help from knowledge of the data, the classes desired, and the algorithm to be used is required. In this paper we integrated the (GIS&RS, and stable isotopes methods for fingerprinting Nitrate sources in shallow boreholes. The global positioning system (GPS, used in the field to identify the shallow boreholes location in a three dimensional coordinate (Latitude, longitude, and altitude, Water samples were collected from 19 shallow boreholes in the study areas according to the standard sampling method send to laboratory to measure stable nitrogen (δ15Nnitrate, and Nitrate-oxygen (δ18Onitrate isotopes. Analysis were conducted by using isotope ratio mass spectrometry (IRMS. We can conclude that, special distribution and integration of GIs & RS help to identify the source of nitrate pollution.

  18. Detection of the Nitrate Pollution Sources in Shallow Aquifer, Using Integration of RS&GIS with Stable Isotopes Technologies

    Science.gov (United States)

    Shakak, N. B. I.

    2018-04-01

    Geographical information system (GIS) and remote sensing technique is a tool which is used for acquiring data from space, storing, analyzing and displaying spatial data, also can use for investigating source of environmental pollution which is affect health. Sudan landsat mosaic image which acquired in 2013 was used in this study to develop land use and land cover maps for tow selected study area, Khartoum urban area, and Bara locality in North kordofan state western Sudan. The main objective to assess the source of Nitrate pollution in shallow aquifer. ERDAS software was used to create land cover-land use maps for the study areas. For Khartoum town we used land sat mosaic image which acquire in 2013, and used supervised classification which more closely controlled than unsupervised. In this process, we select pixel that represent patterns you recognized or can identify with help from knowledge of the data, the classes desired, and the algorithm to be used is required. In this paper we integrated the (GIS&RS), and stable isotopes methods for fingerprinting Nitrate sources in shallow boreholes. The global positioning system (GPS), used in the field to identify the shallow boreholes location in a three dimensional coordinate (Latitude, longitude, and altitude), Water samples were collected from 19 shallow boreholes in the study areas according to the standard sampling method send to laboratory to measure stable nitrogen (δ15Nnitrate), and Nitrate-oxygen (δ18Onitrate) isotopes. Analysis were conducted by using isotope ratio mass spectrometry (IRMS). We can conclude that, special distribution and integration of GIs & RS help to identify the source of nitrate pollution.

  19. Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages.

    Directory of Open Access Journals (Sweden)

    Luis F Aguirre

    Full Text Available Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups. Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for

  20. Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages.

    Science.gov (United States)

    Aguirre, Luis F; Montaño-Centellas, Flavia A; Gavilanez, M Mercedes; Stevens, Richard D

    2016-01-01

    Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups). Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement) was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia) create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for patterns of functional

  1. Teaching about the Earth Online: Faculty-Sourced Guidance from InTeGrate

    Science.gov (United States)

    McDaris, J. R.; Bralower, T. J.; Anbar, A. D.; Leinbach, A.

    2017-12-01

    Teaching online is growing in acceptance within the higher education community and its accessibility creates an opportunity to reach students from diverse backgrounds with geoscience content. There is a need to develop best practices for teaching about Earth online as new technologies, pedagogical approaches, and teaching materials that incorporate societal issues and data emerge. In response to this need, the InTeGrate: Teaching about Earth for a Sustainable Future project convened a workshop of interdisciplinary faculty who teach about the Earth online, in a variety of contexts, to develop consensus best-practices, collect online resources, and develop teaching materials to share with the rest of the community. Workshop participants generated five broad categories of guidance for faculty teaching online: develop communication and a sense of community among class participants, stimulate student engagement, develop activity frameworks that scale with class size, include information literacy in the curriculum explicitly, and employ effective management and assessment techniques. Many of the best practices highlighted by the group are not unique to teaching online, but teaching online rather than face-to-face affects how they are or can be implemented. The suite of webpages developed from this work showcase specific strategies in each area, underpinned by examples drawn from the experiences of the participants. This resource can provide a wealth of advice for faculty seeking help for teaching online. Faculty can also provide feedback on the strategies and add their own experiences to the collection. Participants also worked together in teams to develop new or revise existing teaching resources to make available via the InTeGrate website. In addition, they shared insights about online resources they use in their teaching and class management and developed plans for an online repository for next-generation, interactive educational materials and tools for creating them

  2. Designing with solar power a source book for building integrated photovoltaics (BIPV)

    CERN Document Server

    Prasad, Deo

    2014-01-01

    Designing with Solar Power is the result of international collaborative research and development work carried out within the framework of the International Energy Agency's Photovoltaic Power Systems Programme (PVPS) and performed within its Task 7 on 'Photovoltaic power systems in the built environment'.Each chapter of this precisely detailed and informative book has been prepared by an international expert in a specific area related to the development, use and application of building-integrated photovoltaics (BiPV). Chapters not only cover the basics of solar power and electrical concepts, bu

  3. [Integrity].

    Science.gov (United States)

    Gómez Rodríguez, Rafael Ángel

    2014-01-01

    To say that someone possesses integrity is to claim that that person is almost predictable about responses to specific situations, that he or she can prudentially judge and to act correctly. There is a closed interrelationship between integrity and autonomy, and the autonomy rests on the deeper moral claim of all humans to integrity of the person. Integrity has two senses of significance for medical ethic: one sense refers to the integrity of the person in the bodily, psychosocial and intellectual elements; and in the second sense, the integrity is the virtue. Another facet of integrity of the person is la integrity of values we cherish and espouse. The physician must be a person of integrity if the integrity of the patient is to be safeguarded. The autonomy has reduced the violations in the past, but the character and virtues of the physician are the ultimate safeguard of autonomy of patient. A field very important in medicine is the scientific research. It is the character of the investigator that determines the moral quality of research. The problem arises when legitimate self-interests are replaced by selfish, particularly when human subjects are involved. The final safeguard of moral quality of research is the character and conscience of the investigator. Teaching must be relevant in the scientific field, but the most effective way to teach virtue ethics is through the example of the a respected scientist.

  4. An open source GIS-based tool to integrate the fragmentation mechanism in rockfall propagation

    Science.gov (United States)

    Matas, Gerard; Lantada, Nieves; Gili, Josep A.; Corominas, Jordi

    2015-04-01

    Rockfalls are frequent instability processes in road cuts, open pit mines and quarries, steep slopes and cliffs. Even though the stability of rock slopes can be determined using analytical approaches, the assessment of large rock cliffs require simplifying assumptions due to the difficulty of working with a large amount of joints, the scattering of both the orientations and strength parameters. The attitude and persistency of joints within the rock mass define the size of kinematically unstable rock volumes. Furthermore the rock block will eventually split in several fragments during its propagation downhill due its impact with the ground surface. Knowledge of the size, energy, trajectory… of each block resulting from fragmentation is critical in determining the vulnerability of buildings and protection structures. The objective of this contribution is to present a simple and open source tool to simulate the fragmentation mechanism in rockfall propagation models and in the calculation of impact energies. This tool includes common modes of motion for falling boulders based on the previous literature. The final tool is being implemented in a GIS (Geographic Information Systems) using open source Python programming. The tool under development will be simple, modular, compatible with any GIS environment, open source, able to model rockfalls phenomena correctly. It could be used in any area susceptible to rockfalls with a previous adjustment of the parameters. After the adjustment of the model parameters to a given area, a simulation could be performed to obtain maps of kinetic energy, frequency, stopping density and passing heights. This GIS-based tool and the analysis of the fragmentation laws using data collected from recent rockfall have being developed within the RockRisk Project (2014-2016). This project is funded by the Spanish Ministerio de Economía y Competitividad and entitled "Rockfalls in cliffs: risk quantification and its prevention"(BIA2013-42582-P).

  5. Note: Hollow cathode lamp with integral, high optical efficiency isolation valve: A modular vacuum ultraviolet source

    International Nuclear Information System (INIS)

    Sloan Roberts, F.; Anderson, Scott L.

    2013-01-01

    The design and operating conditions of a hollow cathode discharge lamp for the generation of vacuum ultraviolet radiation, suitable for ultrahigh vacuum (UHV) application, are described in detail. The design is easily constructed, and modular, allowing it to be adapted to different experimental requirements. A thin isolation valve is built into one of the differential pumping stages, isolating the discharge section from the UHV section, both for vacuum safety and to allow lamp maintenance without venting the UHV chamber. The lamp has been used both for ultraviolet photoelectron spectroscopy of surfaces and as a “soft” photoionization source for gas-phase mass spectrometry

  6. Note: Hollow cathode lamp with integral, high optical efficiency isolation valve: A modular vacuum ultraviolet source

    Energy Technology Data Exchange (ETDEWEB)

    Sloan Roberts, F.; Anderson, Scott L. [Department of Chemistry, University of Utah, 315 S. 1400 E., Salt Lake City, Utah 84112 (United States)

    2013-12-15

    The design and operating conditions of a hollow cathode discharge lamp for the generation of vacuum ultraviolet radiation, suitable for ultrahigh vacuum (UHV) application, are described in detail. The design is easily constructed, and modular, allowing it to be adapted to different experimental requirements. A thin isolation valve is built into one of the differential pumping stages, isolating the discharge section from the UHV section, both for vacuum safety and to allow lamp maintenance without venting the UHV chamber. The lamp has been used both for ultraviolet photoelectron spectroscopy of surfaces and as a “soft” photoionization source for gas-phase mass spectrometry.

  7. Note: Hollow cathode lamp with integral, high optical efficiency isolation valve: a modular vacuum ultraviolet source.

    Science.gov (United States)

    Roberts, F Sloan; Anderson, Scott L

    2013-12-01

    The design and operating conditions of a hollow cathode discharge lamp for the generation of vacuum ultraviolet radiation, suitable for ultrahigh vacuum (UHV) application, are described in detail. The design is easily constructed, and modular, allowing it to be adapted to different experimental requirements. A thin isolation valve is built into one of the differential pumping stages, isolating the discharge section from the UHV section, both for vacuum safety and to allow lamp maintenance without venting the UHV chamber. The lamp has been used both for ultraviolet photoelectron spectroscopy of surfaces and as a "soft" photoionization source for gas-phase mass spectrometry.

  8. [Inversion of results upon using an "integral index" from an ostensibly authoritative source].

    Science.gov (United States)

    Galkin, A V

    2012-01-01

    General results and conclusions of Nesterenko et al. [Biofizika 57(4)] have been distorted by uncritically applying an invalid "unifying formula" from a recent monograph [ISBN 978-5-02-035593-4]. Readers are asked to ignore the Russian publication but take the fully revised English version [Biophysics 57(4)] or contact the authors (tv-nesterenko@mail.ru, ubflab@ibp.ru). Here I briefly show the basic defects in the quasi-quantitative means of data analysis offered in that book, and mention some more problems regarding erroneous information in ostensibly authoritative sources.

  9. Integrating rooftop solar into a multi-source energy planning optimization model

    International Nuclear Information System (INIS)

    Arnette, Andrew N.

    2013-01-01

    Highlights: • There is significant technical capacity for rooftop solar installations. • Rooftop solar generation is heavily dependent on key parameters. • Rooftop solar should be one of several options for increasing renewable energy. • Renewable energy planning should consider both cost and benefits. - Abstract: This research uses an optimization model to compare the role of rooftop solar generation versus large-scale solar and wind farm installations in renewable energy planning. The model consists of competing objectives, minimizing annual generation costs and minimizing annual greenhouse gas emissions. Rather than focus on the individual consumer’s investment decision, over 20 scenarios were developed which explored key input parameters such as the maximum penetration level of rooftop solar installations, pricing of equipment, tax credits, and net-metering policy to determine what role rooftop solar plays in renewable energy investment at an aggregate level. The research finds that at lower levels of penetration, such as those currently found in the United States, other renewable energy sources remain viable options, thus rooftop solar should be just one option considered when increasing development of renewable energy sources. The research also shows that a balanced approach taking into account both of the opposing objectives will lead to greater levels of rooftop solar generation than focusing solely on cost or emissions. Therefore, rooftop solar should be considered as part of an overall balanced approach to increasing renewable energy generation

  10. OPTiM: Optical projection tomography integrated microscope using open-source hardware and software.

    Science.gov (United States)

    Watson, Thomas; Andrews, Natalie; Davis, Samuel; Bugeon, Laurence; Dallman, Margaret D; McGinty, James

    2017-01-01

    We describe the implementation of an OPT plate to perform optical projection tomography (OPT) on a commercial wide-field inverted microscope, using our open-source hardware and software. The OPT plate includes a tilt adjustment for alignment and a stepper motor for sample rotation as required by standard projection tomography. Depending on magnification requirements, three methods of performing OPT are detailed using this adaptor plate: a conventional direct OPT method requiring only the addition of a limiting aperture behind the objective lens; an external optical-relay method allowing conventional OPT to be performed at magnifications >4x; a remote focal scanning and region-of-interest method for improved spatial resolution OPT (up to ~1.6 μm). All three methods use the microscope's existing incoherent light source (i.e. arc-lamp) and all of its inherent functionality is maintained for day-to-day use. OPT acquisitions are performed on in vivo zebrafish embryos to demonstrate the implementations' viability.

  11. Taxonomic bias in biodiversity data and societal preferences.

    Science.gov (United States)

    Troudet, Julien; Grandcolas, Philippe; Blin, Amandine; Vignes-Lebbe, Régine; Legendre, Frédéric

    2017-08-22

    Studying and protecting each and every living species on Earth is a major challenge of the 21 st century. Yet, most species remain unknown or unstudied, while others attract most of the public, scientific and government attention. Although known to be detrimental, this taxonomic bias continues to be pervasive in the scientific literature, but is still poorly studied and understood. Here, we used 626 million occurrences from the Global Biodiversity Information Facility (GBIF), the biggest biodiversity data portal, to characterize the taxonomic bias in biodiversity data. We also investigated how societal preferences and taxonomic research relate to biodiversity data gathering. For each species belonging to 24 taxonomic classes, we used the number of publications from Web of Science and the number of web pages from Bing searches to approximate research activity and societal preferences. Our results show that societal preferences, rather than research activity, strongly correlate with taxonomic bias, which lead us to assert that scientists should advertise less charismatic species and develop societal initiatives (e.g. citizen science) that specifically target neglected organisms. Ensuring that biodiversity is representatively sampled while this is still possible is an urgent prerequisite for achieving efficient conservation plans and a global understanding of our surrounding environment.

  12. Microscope-Integrated Intraoperative Ultrahigh-Speed Swept-Source Optical Coherence Tomography for Widefield Retinal and Anterior Segment Imaging.

    Science.gov (United States)

    Lu, Chen D; Waheed, Nadia K; Witkin, Andre; Baumal, Caroline R; Liu, Jonathan J; Potsaid, Benjamin; Joseph, Anthony; Jayaraman, Vijaysekhar; Cable, Alex; Chan, Kinpui; Duker, Jay S; Fujimoto, James G

    2018-02-01

    To demonstrate the feasibility of retinal and anterior segment intraoperative widefield imaging using an ultrahigh-speed, swept-source optical coherence tomography (SS-OCT) surgical microscope attachment. A prototype post-objective SS-OCT using a 1,050-nm wavelength, 400 kHz A-scan rate, vertical cavity surface-emitting laser (VCSEL) light source was integrated to a commercial ophthalmic surgical microscope after the objective. Each widefield OCT data set was acquired in 3 seconds (1,000 × 1,000 A-scans, 12 × 12 mm 2 for retina and 10 × 10 mm 2 for anterior segment). Intraoperative SS-OCT was performed in 20 eyes of 20 patients. In six of seven membrane peels and five of seven rhegmatogenous retinal detachment repair surgeries, widefield retinal imaging enabled evaluation pre- and postoperatively. In all seven cataract cases, anterior imaging evaluated the integrity of the posterior lens capsule. Ultrahigh-speed SS-OCT enables widefield intraoperative viewing in the posterior and anterior eye. Widefield imaging visualizes ocular structures and pathology without requiring OCT realignment. [Ophthalmic Surg Lasers Imaging Retina. 2018;49:94-102.]. Copyright 2018, SLACK Incorporated.

  13. Internet電子字典之整合(上 Integration of Dictionary Sources on the Internet

    Directory of Open Access Journals (Sweden)

    Shih-hsion Huang

    1996-09-01

    Full Text Available 無This study focuses on the integration and analysis of the collected electronic dictionaries distributed over the Gopher/WWW servers around the Internet. The Internet is a worldwide network carrying lots of valuable information. On the Internet, reference librarians are requested to familiarize with all manner of resources. Many Resource Discovery Systems have been developed to allow users to easily organize, browse and search information distributed throughout the Internet, like the Gopher and WWW, but being as a tool for library information services still has some quality problems. The 141 electronic dictionaries are collected around the Internet. It is, therefore, intended to help reference librarians and users as a tool of information quality gateway as well as of information quality/quantity filter for their effective information utilization.

  14. Free and open source software at CERN: integration of drivers in the Linux kernel

    International Nuclear Information System (INIS)

    Gonzalez Cobas, J.D.; Iglesias Gonsalvez, S.; Howard Lewis, J.; Serrano, J.; Vanga, M.; Cota, E.G.; Rubini, A.; Vaga, F.

    2012-01-01

    Most device drivers written for accelerator control systems suffer from a severe lack of portability due to the ad hoc nature of the code, often embodied with intimate knowledge of the particular machine it is deployed in. In this paper we challenge this practice by arguing for the opposite approach: development in the open, which in our case translates into the integration of our code within the Linux kernel. We make our case by describing the upstream merge effort of the tsi148 driver, a critical (and complex) component of the control system. The encouraging results from this effort have then led us to follow the same approach with two more ambitious projects, currently in the works: Linux support for the upcoming FMC boards and a new I/O subsystem. (authors)

  15. CMOS On-Chip Optoelectronic Neural Interface Device with Integrated Light Source for Optogenetics

    International Nuclear Information System (INIS)

    Sawadsaringkarn, Y; Kimura, H; Maezawa, Y; Nakajima, A; Kobayashi, T; Sasagawa, K; Noda, T; Tokuda, T; Ohta, J

    2012-01-01

    A novel optoelectronic neural interface device is proposed for target applications in optogenetics for neural science. The device consists of a light emitting diode (LED) array implemented on a CMOS image sensor for on-chip local light stimulation. In this study, we designed a suitable CMOS image sensor equipped with on-chip electrodes to drive the LEDs, and developed a device structure and packaging process for LED integration. The prototype device produced an illumination intensity of approximately 1 mW with a driving current of 2.0 mA, which is expected to be sufficient to activate channelrhodopsin (ChR2). We also demonstrated the functions of light stimulation and on-chip imaging using a brain slice from a mouse as a target sample.

  16. Integrating large-scale cogeneration of hydrogen and electricity from wind and nuclear sources (NUWINDTM)

    International Nuclear Information System (INIS)

    Miller, A. I.; Duffey, R. B.

    2008-01-01

    As carbon-free fuels, hydrogen and electricity are headed for major roles in replacing hydrocarbons as the world constrains carbon dioxide (CO 2 ) emissions. This will apply particularly to the transport sector. A general trend toward electric drive on-board vehicles is already evident and hydrogen converted to electricity by a fuel cell is likely to be a major source of on-board electricity. The major car manufacturers continue to invest heavily in this option and significant government initiatives in both the USA and Canada are beginning demonstration deployments of the infrastructure needed for hydrogen refueling. However, early adoption of hydrogen as a transport fuel may well be concentrated on heavy-duty transportation: trains, ships and trucks, where battery storage of electricity is unlikely to be practical. But both hydrogen and electricity are secondary fuels and are only effective if the source of the primary energy is a low CO 2 emitter such as nuclear and wind. A competitive cost is also essential and, to achieve this, one must rely on off-peak electricity prices. This paper examines historical data for electricity prices and the actual output of the main wind farms in Ontario to show how nuclear and wind can be combined to generate hydrogen by water electrolysis at prices that are competitive with fossil-based hydrogen production. The NuWind TM concept depends on operating electrolysis cells over an extended range of current densities to accommodate the inherent variability of wind and of electricity prices as they vary in open markets. The cost of co-producing hydrogen with electricity originating from nuclear plants (80%) and from wind turbines (20%) is very close to that of production from a constantly available electricity source. In contrast, the price of hydrogen produced using electricity from wind alone is estimated to cost about $1500/tonne more than hydrogen from NuWind or nuclear alone because the electrolysis facility must be much larger

  17. Integrated watershed- and farm-scale modeling framework for targeting critical source areas while maintaining farm economic viability.

    Science.gov (United States)

    Ghebremichael, Lula T; Veith, Tamie L; Hamlett, James M

    2013-01-15

    Quantitative risk assessments of pollution and data related to the effectiveness of mitigating best management practices (BMPs) are important aspects of nonpoint source pollution control efforts, particularly those driven by specific water quality objectives and by measurable improvement goals, such as the total maximum daily load (TMDL) requirements. Targeting critical source areas (CSAs) that generate disproportionately high pollutant loads within a watershed is a crucial step in successfully controlling nonpoint source pollution. The importance of watershed simulation models in assisting with the quantitative assessments of CSAs of pollution (relative to their magnitudes and extents) and of the effectiveness of associated BMPs has been well recognized. However, due to the distinct disconnect between the hydrological scale in which these models conduct their evaluation and the farm scale at which feasible BMPs are actually selected and implemented, and due to the difficulty and uncertainty involved in transferring watershed model data to farm fields, there are limited practical applications of these tools in the current nonpoint source pollution control efforts by conservation specialists for delineating CSAs and planning targeting measures. There are also limited approaches developed that can assess impacts of CSA-targeted BMPs on farm productivity and profitability together with the assessment of water quality improvements expected from applying these measures. This study developed a modeling framework that integrates farm economics and environmental aspects (such as identification and mitigation of CSAs) through joint use of watershed- and farm-scale models in a closed feedback loop. The integration of models in a closed feedback loop provides a way for environmental changes to be evaluated with regard to the impact on the practical aspects of farm management and economics, adjusted or reformulated as necessary, and revaluated with respect to effectiveness of

  18. Compact, integrable, and long life time Raman multiline UV-Vis source based on hypocycloid core Kagome HC-PCF

    Science.gov (United States)

    Chafer, M.; Lekiefs, Q.; Gorse, A.; Beaudou, B.; Debord, B.; Gérôme, F.; Benabid, F.

    2017-02-01

    Raman-gas filled HC-PCF has proved to be an outstanding Raman-convertor, as illustrated by the generation of more than 5 octaves wide Raman comb using a hydrogen-filled Kagome HC-PCF pumped with high power picosecond-laser, or the generation of multiline Raman-source in the UV-Vis using a very compact system pumped with micro-chip laser. Whilst these demonstrations are promising, a principal challenge for the industrialization of such a Raman source is its lifetime as the H2 diffusion through silica is high enough to leak out from the fiber within only a few months. Here, we report on a HC-PCF based Raman multiline source with a very long life-span. The system consists of hydrogen filled ultra-low loss HC-PCF contained in highly sealed box, coined CombBox, and pumped with a 532 nm micro-chip laser. This combination is a turnkey multiline Raman-source with a "shoe box" size. The CombBox is a robust and compact component that can be integrated and pumped with any common pulsed laser. When pumped with a 32 mW average power and 1 ns frequency-doubled Nd:Yag microchip laser, this Raman-source generates 24 lines spanning from 355 to 745 nm, and a peak power density per line of 260 mW/nm for the strongest lines. Both the output power and the spectrum remained constant over its monitoring duration of more than six months. The spectrum of this multiline laser superimposes with no less than 17 absorption peaks of fluorescent dyes from the Alexa Fluor family used as biological markers.

  19. Discovering perturbation of modular structure in HIV progression by integrating multiple data sources through non-negative matrix factorization.

    Science.gov (United States)

    Ray, Sumanta; Maulik, Ujjwal

    2016-12-20

    Detecting perturbation in modular structure during HIV-1 disease progression is an important step to understand stage specific infection pattern of HIV-1 virus in human cell. In this article, we proposed a novel methodology on integration of multiple biological information to identify such disruption in human gene module during different stages of HIV-1 infection. We integrate three different biological information: gene expression information, protein-protein interaction information and gene ontology information in single gene meta-module, through non negative matrix factorization (NMF). As the identified metamodules inherit those information so, detecting perturbation of these, reflects the changes in expression pattern, in PPI structure and in functional similarity of genes during the infection progression. To integrate modules of different data sources into strong meta-modules, NMF based clustering is utilized here. Perturbation in meta-modular structure is identified by investigating the topological and intramodular properties and putting rank to those meta-modules using a rank aggregation algorithm. We have also analyzed the preservation structure of significant GO terms in which the human proteins of the meta-modules participate. Moreover, we have performed an analysis to show the change of coregulation pattern of identified transcription factors (TFs) over the HIV progression stages.

  20. Digital Reconstruction of AN Archaeological Site Based on the Integration of 3d Data and Historical Sources

    Science.gov (United States)

    Guidi, G.; Russo, M.; Angheleddu, D.

    2013-02-01

    The methodology proposed in this paper in based on an integrated approach for creating a 3D digital reconstruction of an archaeological site, using extensively the 3D documentation of the site in its current state, followed by an iterative interaction between archaeologists and digital modelers, leading to a progressive refinement of the reconstructive hypotheses. The starting point of the method is the reality-based model, which, together with ancient drawings and documents, is used for generating the first reconstructive step. Such rough approximation of a possible architectural structure can be annotated through archaeological considerations that has to be confronted with geometrical constraints, producing a reduction of the reconstructive hypotheses to a limited set, each one to be archaeologically evaluated. This refinement loop on the reconstructive choices is iterated until the result become convincing by both points of view, integrating in the best way all the available sources. The proposed method has been verified on the ruins of five temples in the My Son site, a wide archaeological area located in central Vietnam. The integration of 3D surveyed data and historical documentation has allowed to support a digital reconstruction of not existing architectures, developing their three-dimensional digital models step by step, from rough shapes to highly sophisticate virtual prototypes.

  1. An Integrated Microfabricated Chip with Double Functions as an Ion Source and Air Pump Based on LIGA Technology

    Directory of Open Access Journals (Sweden)

    Hua Li

    2017-01-01

    Full Text Available The injection and ionization of volatile organic compounds (VOA by an integrated chip is experimentally analyzed in this paper. The integrated chip consists of a needle-to-cylinder electrode mounting on the Polymethyl Methacrylate (PMMA substrate. The needle-to-cylinder electrode is designed and fabricated by Lithographie, Galvanoformung and Abformung (LIGA technology. In this paper, the needle is connected to a negative power supply of −5 kV and used as the cathode; the cylinder electrodes are composed of two arrays of cylinders and serve as the anode. The ionic wind is produced based on corona and glow discharges of needle-to-cylinder electrodes. The experimental setup is designed to observe the properties of the needle-to-cylinder discharge and prove its functions as an ion source and air pump. In summary, the main results are as follows: (1 the ionic wind velocity produced by the chip is about 0.79 m/s at an applied voltage of −3300 V; (2 acetic acid and ammonia water can be injected through the chip, which is proved by pH test paper; and (3 the current measured by a Faraday cup is about 10 pA for acetic acid and ammonia with an applied voltage of −3185 V. The integrated chip is promising for portable analytical instruments, such as ion mobility spectrometry (IMS, field asymmetric ion mobility spectrometry (FAIMS, and mass spectrometry (MS.

  2. LINKS: learning-based multi-source IntegratioN frameworK for Segmentation of infant brain images.

    Science.gov (United States)

    Wang, Li; Gao, Yaozong; Shi, Feng; Li, Gang; Gilmore, John H; Lin, Weili; Shen, Dinggang

    2015-03-01

    Segmentation of infant brain MR images is challenging due to insufficient image quality, severe partial volume effect, and ongoing maturation and myelination processes. In the first year of life, the image contrast between white and gray matters of the infant brain undergoes dramatic changes. In particular, the image contrast is inverted around 6-8months of age, and the white and gray matter tissues are isointense in both T1- and T2-weighted MR images and thus exhibit the extremely low tissue contrast, which poses significant challenges for automated segmentation. Most previous studies used multi-atlas label fusion strategy, which has the limitation of equally treating the different available image modalities and is often computationally expensive. To cope with these limitations, in this paper, we propose a novel learning-based multi-source integration framework for segmentation of infant brain images. Specifically, we employ the random forest technique to effectively integrate features from multi-source images together for tissue segmentation. Here, the multi-source images include initially only the multi-modality (T1, T2 and FA) images and later also the iteratively estimated and refined tissue probability maps of gray matter, white matter, and cerebrospinal fluid. Experimental results on 119 infants show that the proposed method achieves better performance than other state-of-the-art automated segmentation methods. Further validation was performed on the MICCAI grand challenge and the proposed method was ranked top among all competing methods. Moreover, to alleviate the possible anatomical errors, our method can also be combined with an anatomically-constrained multi-atlas labeling approach for further improving the segmentation accuracy. Copyright © 2014 Elsevier Inc. All rights reserved.

  3. Probabilistic integrated risk assessment of human exposure risk to environmental bisphenol A pollution sources.

    Science.gov (United States)

    Fu, Keng-Yen; Cheng, Yi-Hsien; Chio, Chia-Pin; Liao, Chung-Min

    2016-10-01

    Environmental bisphenol A (BPA) exposure has been linked to a variety of adverse health effects such as developmental and reproductive issues. However, establishing a clear association between BPA and the likelihood of human health is complex yet fundamentally uncertain. The purpose of this study was to assess the potential exposure risks from environmental BPA among Chinese population based on five human health outcomes, namely immune response, uterotrophic assay, cardiovascular disease (CVD), diabetes, and behavior change. We addressed these health concerns by using a stochastic integrated risk assessment approach. The BPA dose-dependent likelihood of effects was reconstructed by a series of Hill models based on animal models or epidemiological data. We developed a physiologically based pharmacokinetic (PBPK) model that allows estimation of urinary BPA concentration from external exposures. Here we showed that the daily average exposure concentrations of BPA and urinary BPA estimates were consistent with the published data. We found that BPA exposures were less likely to pose significant risks for infants (0-1 year) and adults (male and female >20 years) with human long-term BPA susceptibility in relation to multiple exposure pathways, and for informing the public of the negligible magnitude of environmental BPA pollution impacts on human health.

  4. road-map for smart grids and electricity systems integrating renewable energy sources

    International Nuclear Information System (INIS)

    Rebec, Gaelle; Moisan, Francois; Gioria, Michel

    2009-12-01

    The vision of smart grids and electricity systems elaborated in this road-map was drawn up on the basis of consultation and talks with a group of experts from industry (EDF, AREVA, GDF-Suez), public research bodies (SUPELEC, Ecole des Mines, INES, universities), grid operators (ERDF, RTE), local authorities' groups (FNCCR) and ADEME. In the course of these working sessions the experts expressed their opinions intuitu personae. The views outlined in this road-map are not to be assimilated with the official positions of the corporations or research organisations to which the members of the group belong. The visions of smart electricity grids and systems integrating renewable energies in 2020 and in 2050 are in sharp contrast. This contrast was deliberately sought out, for two reasons: - to offer the most exhaustive panorama possible of imaginable futures; - to avoid neglecting a critical technological, organisational or socioeconomic bottleneck that might be associated with a possible scenario left out of the discussion. Accordingly, in seeking contrasting visions the group arrived at extreme representations and even caricatures of the future, which nonetheless help define the outer limit of possibilities, and the scope within which the actual situation will most likely be situated in 2020 and in 2050

  5. Operation Modeling of Power Systems Integrated with Large-Scale New Energy Power Sources

    Directory of Open Access Journals (Sweden)

    Hui Li

    2016-10-01

    Full Text Available In the most current methods of probabilistic power system production simulation, the output characteristics of new energy power generation (NEPG has not been comprehensively considered. In this paper, the power output characteristics of wind power generation and photovoltaic power generation are firstly analyzed based on statistical methods according to their historical operating data. Then the characteristic indexes and the filtering principle of the NEPG historical output scenarios are introduced with the confidence level, and the calculation model of NEPG’s credible capacity is proposed. Based on this, taking the minimum production costs or the best energy-saving and emission-reduction effect as the optimization objective, the power system operation model with large-scale integration of new energy power generation (NEPG is established considering the power balance, the electricity balance and the peak balance. Besides, the constraints of the operating characteristics of different power generation types, the maintenance schedule, the load reservation, the emergency reservation, the water abandonment and the transmitting capacity between different areas are also considered. With the proposed power system operation model, the operation simulations are carried out based on the actual Northwest power grid of China, which resolves the new energy power accommodations considering different system operating conditions. The simulation results well verify the validity of the proposed power system operation model in the accommodation analysis for the power system which is penetrated with large scale NEPG.

  6. Luminopsins integrate opto- and chemogenetics by using physical and biological light sources for opsin activation

    Science.gov (United States)

    Berglund, Ken; Clissold, Kara; Li, Haofang E.; Wen, Lei; Park, Sung Young; Gleixner, Jan; Klein, Marguerita E.; Lu, Dongye; Barter, Joseph W.; Rossi, Mark A.; Augustine, George J.; Yin, Henry H.; Hochgeschwender, Ute

    2016-01-01

    Luminopsins are fusion proteins of luciferase and opsin that allow interrogation of neuronal circuits at different temporal and spatial resolutions by choosing either extrinsic physical or intrinsic biological light for its activation. Building on previous development of fusions of wild-type Gaussia luciferase with channelrhodopsin, here we expanded the utility of luminopsins by fusing bright Gaussia luciferase variants with either channelrhodopsin to excite neurons (luminescent opsin, LMO) or a proton pump to inhibit neurons (inhibitory LMO, iLMO). These improved LMOs could reliably activate or silence neurons in vitro and in vivo. Expression of the improved LMO in hippocampal circuits not only enabled mapping of synaptic activation of CA1 neurons with fine spatiotemporal resolution but also could drive rhythmic circuit excitation over a large spatiotemporal scale. Furthermore, virus-mediated expression of either LMO or iLMO in the substantia nigra in vivo produced not only the expected bidirectional control of single unit activity but also opposing effects on circling behavior in response to systemic injection of a luciferase substrate. Thus, although preserving the ability to be activated by external light sources, LMOs expand the use of optogenetics by making the same opsins accessible to noninvasive, chemogenetic control, thereby allowing the same probe to manipulate neuronal activity over a range of spatial and temporal scales. PMID:26733686

  7. Integration of wave energy and other marine renewable energy sources with the needs of coastal societies

    Directory of Open Access Journals (Sweden)

    Richard Manasseh

    2017-04-01

    Full Text Available Marine renewable energy has the potential to solve both the energy-security and coastal-protection problems affecting coastal societies. In this article, the potential benefits arising from the combination of marine renewable energy technologies with infrastructural needs for coastal protection and other local needs are analysed. Classifications of technologies are developed to inform future coastal planning. Explanations of the resources and technologies are presented in layperson’s term. The threat of coastal inundation under climate-change scenarios is a major global issue. The investment in new infrastructure demanded by cities, ports and communities at risk of inundation could very substantially reduce the levelised cost of electricity from renewable sources, provided the infrastructure is designed with the dual purpose of power generation and coastal protection. Correspondingly, the sale of electricity from such infrastructure could defray the long-term cost of installing coastal protection. Furthermore, many marine renewable energy technologies provide a platform on which other forms of renewable energy generation could be mounted. It is noted that the complex geophysical and engineering issues arising from this opportunity must be assessed considering socio-economic factors.

  8. Genomic characterization reconfirms the taxonomic status of Lactobacillus parakefiri

    Science.gov (United States)

    TANIZAWA, Yasuhiro; KOBAYASHI, Hisami; KAMINUMA, Eli; SAKAMOTO, Mitsuo; OHKUMA, Moriya; NAKAMURA, Yasukazu; ARITA, Masanori; TOHNO, Masanori

    2017-01-01

    Whole-genome sequencing was performed for Lactobacillus parakefiri JCM 8573T to confirm its hitherto controversial taxonomic position. Here, we report its first reliable reference genome. Genome-wide metrics, such as average nucleotide identity and digital DNA-DNA hybridization, and phylogenomic analysis based on multiple genes supported its taxonomic status as a distinct species in the genus Lactobacillus. The availability of a reliable genome sequence will aid future investigations on the industrial applications of L. parakefiri in functional foods such as kefir grains. PMID:28748134

  9. The taxlist package: managing plant taxonomic lists in R

    Directory of Open Access Journals (Sweden)

    Miguel Alvarez

    2018-05-01

    Full Text Available Taxonomic lists are crucial elements of vegetation-plot databases and provide the links between original entries, reference taxon views and different taxon concepts. We introduce the R package taxlist in the context of object-oriented modelling for taxonomic lists. This package provides a data structure based on species lists in Turboveg, which is a software broadly used for the storage of vegetation-plot databases and implements functions for importing and handling them prior to statistical analysis. We also present a schema for relational databases, compatible with taxlist objects and recommend its use for handling diversity records.

  10. Spectral evolution of the Atoll source 4U 1728-34 with RXTE and INTEGRAL: evidence for hard X-ray tail

    NARCIS (Netherlands)

    Tarana, A.; Belloni, T.; Bazzano, A.; Homan, J.; Méndez, M.; Ubertini, P.; Comastri, A.; Angelini, L.; Cappi, M.

    We report the temporal and spectral results on the INTEGRAL and RXTE 2006-2007 observation campaign of the Atoll source 4U 1728-34 (GX 354-0). The source shows, more than once, spectral evolution as revealed by the hardness intensity diagram. The soft state is well described by a Comptonization with

  11. Flares from a new Integral hard X-ray source, IGR J17407-2808, likely associated with the ROSAT source SBM 10

    DEFF Research Database (Denmark)

    Kretschmar, P.; Mereghetti, S.; Hermsen, W.

    2004-01-01

    This new hard X-ray source, IGR J17407-2808, is positionally coincident with a faint ROSAT source listed as no. 10 in the catalogue of sources in the Galactic Center region by Sidoli, Belloni & Mereghetti 2001, A&A 368, 835 and as 2RXP J174040.9-280852 in the ROSAT Source Browser. No other observ...

  12. Switching costs in Information Technology: the proposal of an integrated taxonomic model based on literature Custos de Troca em Tecnologia da Informação: a Proposição de um Modelo Taxonômico Integrado a partir da Literatura

    Directory of Open Access Journals (Sweden)

    Ricardo Engelbert

    2011-09-01

    Full Text Available

    The aim of this paper is to propose an integrated taxonomic model for the switching costs in Information Technology (IT. These costs play a decisive role in the organizations’ process of technology change, and they may limit or even prevent their occurrence, thus reducing the business’s flexibility to adjust to new environmental conditions. Due to the imprisonment they can impose to the organization, it is important to study the switching costs and the way to assess them in order to reduce their impact on the decision-making process involving the adoption of new technologies. The constructs composing the comprehensive model were obtained through thorough literature analysis in the fields of strategy, economics, marketing, information systems, and psychology. Definitions found in the several studies published in these areas were analyzed from the levels of solution, supplier, and management processes involved in the switching of technology, including a temporal perspective. The costs were classified as: selection costs, activation costs, building costs, formal costs, psychological costs, opportunity costs, and costs involved in going back to the previous solution. Since the model’s ambitions are only descriptive of the switching costs, and considering it was based in other studies that, on their turn, are supported in the practice of the business market and in the human behavior in decision-making processes, the model does not need an empirical validation in order to be readily used. Nonetheless, future studies may focus on identifying what costs are predominant in what situations and the intensity with which decision-makers observe each kind of switching cost. This will make the model both explanatory and descriptive.

    Este artigo tem como objetivo a proposição de um modelo taxonômico integrado para os custos de troca em tecnologia da informa

  13. Purification and reuse of non-point source wastewater via Myriophyllum-based integrative biotechnology: A review.

    Science.gov (United States)

    Liu, Feng; Zhang, Shunan; Luo, Pei; Zhuang, Xuliang; Chen, Xiang; Wu, Jinshui

    2018-01-01

    In this review, the applications of Myriophyllum-based integrative biotechnology to remove common non-point source (NPS) pollutants, such as nitrogen, phosphorus, heavy metals, and organic pollutants (e.g., pesticides and antibiotics) are summarized. The removal of these pollutants via various mechanisms, including uptake by plant and microbial communities in macrophyte-based treatment systems are discussed. This review highlights the potential use of Myriophyllum biomass to produce animal feed, fertilizer, and other valuable by-products, which can yield cost-effective returns and attract more attention to the regulation and recycling of NPS pollutants. In addition, it demonstrates that utilization of Myriophyllum species is a promising and reliable strategy for wastewater treatment. The future development of sustainable Myriophyllum-based treatment systems is discussed from various perspectives. Copyright © 2017 Elsevier Ltd. All rights reserved.

  14. Design and test of component circuits of an integrated quantum voltage noise source for Johnson noise thermometry

    Science.gov (United States)

    Yamada, Takahiro; Maezawa, Masaaki; Urano, Chiharu

    2015-11-01

    We present design and testing of a pseudo-random number generator (PRNG) and a variable pulse number multiplier (VPNM) which are digital circuit subsystems in an integrated quantum voltage noise source for Jonson noise thermometry. Well-defined, calculable pseudo-random patterns of single flux quantum pulses are synthesized with the PRNG and multiplied digitally with the VPNM. The circuit implementation on rapid single flux quantum technology required practical circuit scales and bias currents, 279 junctions and 33 mA for the PRNG, and 1677 junctions and 218 mA for the VPNM. We confirmed the circuit operation with sufficiently wide margins, 80-120%, with respect to the designed bias currents.

  15. Noise characterization of silicon strip detectors-comparison of sensors with and without integrated jfet source-follower.

    CERN Document Server

    Giacomini, Gabriele

    Noise is often the main factor limiting the performance of detector systems. In this work a detailed study of the noise contributions in different types of silicon microstrip sensors is carried on. We investigate three sensors with double-sided readout fabricated by different suppliers for the ALICE experiment at the CERN LHC, in addition to detectors including an integrated JFET Source-Follower as a first signal conditioning stage. The latter have been designed as an attempt at improving the performance when very long strips, obtained by gangling together several sensors, are required. After a description of the strip sensors and of their operation, the “static” characterization measurements performed on them (current and capacitance versus voltage and/or frequency) are illustrated and interpreted. Numerical device simulation has been employed as an aid in interpreting some of the measurement results. The commonly used models for expressing the noise of the detector-amplifier system in terms of its relev...

  16. Taxonomic perspective of plant species yielding vegetable oils used ...

    African Journals Online (AJOL)

    A search conducted to determine the plants yielding vegetable oils resulted in 78 plant species with potential use in cosmetics and skin care products. The taxonomic position of these plant species is described with a description of vegetable oils from these plants and their use in cosmetic and skin care products.

  17. Taxonomical analysis of the Cancer cluster of galaxies

    International Nuclear Information System (INIS)

    Perea, J.; Olmo, A. del; Moles, M.

    1986-01-01

    A description is presented of the Cancer cluster of galaxies, based on a taxonomical analysis in (α,delta, Vsub(r)) space. Earlier results by previous authors on the lack of dynamical entity of the cluster are confirmed. The present analysis points out the existence of a binary structure in the most populated region of the complex. (author)

  18. Data composition and taxonomic resolution in macroinvertebrate stream typology

    NARCIS (Netherlands)

    Verdonschot, P.F.M.

    2006-01-01

    In the EU water framework directive (WFD) a typological framework is defined for assessing the ecological quality of water bodies in the future. The aim of this study was to test the effect of data composition and taxonomic resolution on this typology. The EU research projects AQEM and STAR provided

  19. Taxonomic status and conservation importance of the avifauna of ...

    African Journals Online (AJOL)

    Democratic Republic of Congo) focussed on the status of 56 taxa, to reveal a high endemism (14 species of a total of at least 642). In addition, 33 taxa were also revealed as possible south-central African endemics but need thorough taxonomic ...

  20. The taxonomic status of giant sengis ( genus Rhynchocyon ) in ...

    African Journals Online (AJOL)

    The sengis (elephant-shrews) of Mozambique are poorly known, especially the taxonomic status of the giant sengis, genus Rhynchocyon. Currently, Rhynchocyon from Mozambique are thought to be chequered sengis, R. cirnei with specimens from the central coastal areas being placed in the subspecies R. c. cirnei, while ...

  1. Floristic composition and taxonomic distribution of plants in the ...

    African Journals Online (AJOL)

    Floristic composition and taxonomic distribution of plants in the dryland of Northwestern Nigeria. ... Analysis of abundance and rarity of species reveals that 10% and 90% of the encountered species were abundant and rare respectively in the study area. These finding poses serious ecological concerns in the study area, ...

  2. Developing green supply chain management strategies: A taxonomic approach

    Directory of Open Access Journals (Sweden)

    Michael Mutingi

    2013-06-01

    Full Text Available Purpose: The objective of this research is to explore the empirical green supply chain activities found in literature, and to develop a taxonomic framework that can be used for formulating appropriate strategies for green supply chains, based on characteristic dimensions for the green supply chain. Design/methodology/approach: The taxonomic framework is developed through (i analysis of green supply chain activities found in existing empirical work or case studies recorded in literature, (ii identification of key dimensions that influence green supply chain management strategies, and (iii development of a taxonomic scheme for selecting or developing green strategies. Findings: The paper finds that this study yielded: a set of three characteristic dimensions that influence strategic green supply chain management, and a guided structured approach selecting appropriate green strategies, providing managerial insights. Research limitations/implications: This paper shows that future work includes development of specific performance management indices according to the taxonomy of green strategies developed in this study. Practical implications: This research provided a practical guided approach that enhances appropriate formulation of green strategies for green supply chain management, while providing sound managerial insights for the supply chain decision maker. The choice of supply chain strategy directly impacts the overall environmental, economic and operations performance of the supply chain. Originality/value: This study presents to supply chain decision makers a new taxonomic framework that simplifies and enhances the formulation of green strategies, and to researchers a comparative understanding of various strategies applicable to green supply chains.

  3. NeuroMatic: An Integrated Open-Source Software Toolkit for Acquisition, Analysis and Simulation of Electrophysiological Data

    Science.gov (United States)

    Rothman, Jason S.; Silver, R. Angus

    2018-01-01

    Acquisition, analysis and simulation of electrophysiological properties of the nervous system require multiple software packages. This makes it difficult to conserve experimental metadata and track the analysis performed. It also complicates certain experimental approaches such as online analysis. To address this, we developed NeuroMatic, an open-source software toolkit that performs data acquisition (episodic, continuous and triggered recordings), data analysis (spike rasters, spontaneous event detection, curve fitting, stationarity) and simulations (stochastic synaptic transmission, synaptic short-term plasticity, integrate-and-fire and Hodgkin-Huxley-like single-compartment models). The merging of a wide range of tools into a single package facilitates a more integrated style of research, from the development of online analysis functions during data acquisition, to the simulation of synaptic conductance trains during dynamic-clamp experiments. Moreover, NeuroMatic has the advantage of working within Igor Pro, a platform-independent environment that includes an extensive library of built-in functions, a history window for reviewing the user's workflow and the ability to produce publication-quality graphics. Since its original release, NeuroMatic has been used in a wide range of scientific studies and its user base has grown considerably. NeuroMatic version 3.0 can be found at http://www.neuromatic.thinkrandom.com and https://github.com/SilverLabUCL/NeuroMatic. PMID:29670519

  4. Assessment of Pressure Sources and Water Body Resilience: An Integrated Approach for Action Planning in a Polluted River Basin.

    Science.gov (United States)

    Mirauda, Domenica; Ostoich, Marco

    2018-02-23

    The present study develops an integrated methodology combining the results of the water-quality classification, according to the Water Framework Directive 2000/60/EC-WFD, with those of a mathematical integrity model. It is able to analyse the potential anthropogenic impacts on the receiving water body and to help municipal decision-makers when selecting short/medium/long-term strategic mitigation actions to be performed in a territory. Among the most important causes of water-quality degradation in a river, the focus is placed on pollutants from urban wastewater. In particular, the proposed approach evaluates the efficiency and the accurate localisation of treatment plants in a basin, as well as the capacity of its river to bear the residual pollution loads after the treatment phase. The methodology is applied to a sample catchment area, located in northern Italy, where water quality is strongly affected by high population density and by the presence of agricultural and industrial activities. Nearly 10 years of water-quality data collected through official monitoring are considered for the implementation of the system. The sample basin shows different real and potential pollution conditions, according to the resilience of the river and surroundings, together with the point and diffuse pressure sources acting on the receiving body.

  5. Assessment of Pressure Sources and Water Body Resilience: An Integrated Approach for Action Planning in a Polluted River Basin

    Directory of Open Access Journals (Sweden)

    Domenica Mirauda

    2018-02-01

    Full Text Available The present study develops an integrated methodology combining the results of the water-quality classification, according to the Water Framework Directive 2000/60/EC—WFD, with those of a mathematical integrity model. It is able to analyse the potential anthropogenic impacts on the receiving water body and to help municipal decision-makers when selecting short/medium/long-term strategic mitigation actions to be performed in a territory. Among the most important causes of water-quality degradation in a river, the focus is placed on pollutants from urban wastewater. In particular, the proposed approach evaluates the efficiency and the accurate localisation of treatment plants in a basin, as well as the capacity of its river to bear the residual pollution loads after the treatment phase. The methodology is applied to a sample catchment area, located in northern Italy, where water quality is strongly affected by high population density and by the presence of agricultural and industrial activities. Nearly 10 years of water-quality data collected through official monitoring are considered for the implementation of the system. The sample basin shows different real and potential pollution conditions, according to the resilience of the river and surroundings, together with the point and diffuse pressure sources acting on the receiving body.

  6. Design and test of component circuits of an integrated quantum voltage noise source for Johnson noise thermometry

    International Nuclear Information System (INIS)

    Yamada, Takahiro; Maezawa, Masaaki; Urano, Chiharu

    2015-01-01

    Highlights: • We demonstrated RSFQ digital components of a new quantum voltage noise source. • A pseudo-random number generator and variable pulse number multiplier are designed. • Fabrication process is based on four Nb wiring layers and Nb/AlOx/Nb junctions. • The circuits successfully operated with wide dc bias current margins, 80–120%. - Abstract: We present design and testing of a pseudo-random number generator (PRNG) and a variable pulse number multiplier (VPNM) which are digital circuit subsystems in an integrated quantum voltage noise source for Jonson noise thermometry. Well-defined, calculable pseudo-random patterns of single flux quantum pulses are synthesized with the PRNG and multiplied digitally with the VPNM. The circuit implementation on rapid single flux quantum technology required practical circuit scales and bias currents, 279 junctions and 33 mA for the PRNG, and 1677 junctions and 218 mA for the VPNM. We confirmed the circuit operation with sufficiently wide margins, 80–120%, with respect to the designed bias currents.

  7. Design and test of component circuits of an integrated quantum voltage noise source for Johnson noise thermometry

    Energy Technology Data Exchange (ETDEWEB)

    Yamada, Takahiro, E-mail: yamada-takahiro@aist.go.jp [Nanoelectronics Research Institute, National Institute of Advanced Industrial Science and Technology, Central 2, Umezono 1-1-1, Tsukuba, Ibaraki 305-8568 (Japan); Maezawa, Masaaki [Nanoelectronics Research Institute, National Institute of Advanced Industrial Science and Technology, Central 2, Umezono 1-1-1, Tsukuba, Ibaraki 305-8568 (Japan); Urano, Chiharu [National Metrology Institute of Japan, National Institute of Advanced Industrial Science and Technology, Central 3, Umezono 1-1-1, Tsukuba, Ibaraki 305-8563 (Japan)

    2015-11-15

    Highlights: • We demonstrated RSFQ digital components of a new quantum voltage noise source. • A pseudo-random number generator and variable pulse number multiplier are designed. • Fabrication process is based on four Nb wiring layers and Nb/AlOx/Nb junctions. • The circuits successfully operated with wide dc bias current margins, 80–120%. - Abstract: We present design and testing of a pseudo-random number generator (PRNG) and a variable pulse number multiplier (VPNM) which are digital circuit subsystems in an integrated quantum voltage noise source for Jonson noise thermometry. Well-defined, calculable pseudo-random patterns of single flux quantum pulses are synthesized with the PRNG and multiplied digitally with the VPNM. The circuit implementation on rapid single flux quantum technology required practical circuit scales and bias currents, 279 junctions and 33 mA for the PRNG, and 1677 junctions and 218 mA for the VPNM. We confirmed the circuit operation with sufficiently wide margins, 80–120%, with respect to the designed bias currents.

  8. SimVascular 2.0: an Integrated Open Source Pipeline for Image-Based Cardiovascular Modeling and Simulation

    Science.gov (United States)

    Lan, Hongzhi; Merkow, Jameson; Updegrove, Adam; Schiavazzi, Daniele; Wilson, Nathan; Shadden, Shawn; Marsden, Alison

    2015-11-01

    SimVascular (www.simvascular.org) is currently the only fully open source software package that provides a complete pipeline from medical image based modeling to patient specific blood flow simulation and analysis. It was initially released in 2007 and has contributed to numerous advances in fundamental hemodynamics research, surgical planning, and medical device design. However, early versions had several major barriers preventing wider adoption by new users, large-scale application in clinical and research studies, and educational access. In the past years, SimVascular 2.0 has made significant progress by integrating open source alternatives for the expensive commercial libraries previously required for anatomic modeling, mesh generation and the linear solver. In addition, it simplified the across-platform compilation process, improved the graphical user interface and launched a comprehensive documentation website. Many enhancements and new features have been incorporated for the whole pipeline, such as 3-D segmentation, Boolean operation for discrete triangulated surfaces, and multi-scale coupling for closed loop boundary conditions. In this presentation we will briefly overview the modeling/simulation pipeline and advances of the new SimVascular 2.0.

  9. The use of nonlinear regression analysis for integrating pollutant concentration measurements with atmospheric dispersion modeling for source term estimation

    International Nuclear Information System (INIS)

    Edwards, L.L.; Freis, R.P.; Peters, L.G.; Gudiksen, P.H.; Pitovranov, S.E.

    1993-01-01

    The accuracy associated with assessing the environmental consequences of an accidental release of radioactivity is highly dependent on the knowledge of the source term characteristics, which are generally poorly known. The development of an automated numerical technique that integrates the radiological measurements with atmospheric dispersion modeling for more accurate source term estimation is reported. Often, this process of parameter estimation is performed by an emergency response assessor, who takes an intelligent first guess at the model parameters, then, comparing the model results with whatever measurements are available, makes an intuitive, informed next guess of the model parameters. This process may be repeated any number of times until the assessor feels that the model results are reasonable in terms of the measured observations. A new approach, based on a nonlinear least-squares regression scheme coupled with the existing Atmospheric Release Advisory Capability three-dimensional atmospheric dispersion models, is to supplement the assessor's intuition with automated mathematical methods that do not significantly increase the response time of the existing predictive models. The viability of the approach is evaluated by estimation of the known SF 6 tracer release rates associated with the Mesoscale Atmospheric Transport Studies tracer experiments conducted at the Savannah River Laboratory during 1983. These 19 experiments resulted in 14 successful, separate tracer releases with sampling of the tracer plumes along the cross-plume arc situated ∼30 km from the release site

  10. From Goals to Action: The Efforts for Increasing Energy Efficiency and Integration of Renewable Sources in Eskilstuna, Sweden

    Directory of Open Access Journals (Sweden)

    Iana Vassileva

    2015-07-01

    Full Text Available Cities’ energy usage accounts for two thirds of global primary energy consumption. Energy efficiency in urban areas is, therefore, one of the most important topics to consider when dealing with urban sustainability. This paper evaluates the goals for increasing energy efficiency and use of renewable energy sources in the areas of transportation, buildings and consumers’ awareness, as stated in the Climate action plan, for the municipality of Eskilstuna, Sweden. The efforts of the municipality to successfully reach their energy efficiency goals, are described in this paper including future perspectives. The results show that although the municipality counts with the advantage of owning and working together with the local housing company and energy provider, in order to reach the established goals, additional strategies need to be considered. For an increased use of renewable energy sources, analysis of rooftops suitable for photovoltaic (PV installation should be carried out as well as the integration of goals for self-consumption. In the transport field, the city needs to prepare for large-scale electric vehicle (EV market penetration and to consider different bike or car sharing options. Finally, more specific awareness campaigns are needed to engage the citizens in reducing their energy consumption and living a more sustainable life.

  11. Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data

    Directory of Open Access Journals (Sweden)

    de los Reyes Benildo G

    2008-04-01

    Full Text Available Abstract Background Integrating data from multiple global assays and curated databases is essential to understand the spatio-temporal interactions within cells. Different experiments measure cellular processes at various widths and depths, while databases contain biological information based on established facts or published data. Integrating these complementary datasets helps infer a mutually consistent transcriptional regulatory network (TRN with strong similarity to the structure of the underlying genetic regulatory modules. Decomposing the TRN into a small set of recurring regulatory patterns, called network motifs (NM, facilitates the inference. Identifying NMs defined by specific transcription factors (TF establishes the framework structure of a TRN and allows the inference of TF-target gene relationship. This paper introduces a computational framework for utilizing data from multiple sources to infer TF-target gene relationships on the basis of NMs. The data include time course gene expression profiles, genome-wide location analysis data, binding sequence data, and gene ontology (GO information. Results The proposed computational framework was tested using gene expression data associated with cell cycle progression in yeast. Among 800 cell cycle related genes, 85 were identified as candidate TFs and classified into four previously defined NMs. The NMs for a subset of TFs are obtained from literature. Support vector machine (SVM classifiers were used to estimate NMs for the remaining TFs. The potential downstream target genes for the TFs were clustered into 34 biologically significant groups. The relationships between TFs and potential target gene clusters were examined by training recurrent neural networks whose topologies mimic the NMs to which the TFs are classified. The identified relationships between TFs and gene clusters were evaluated using the following biological validation and statistical analyses: (1 Gene set enrichment

  12. Integrated cryptosporidium assay to determine oocyst density, infectivity, and genotype for risk assessment of source and reuse water.

    Science.gov (United States)

    King, Brendon; Fanok, Stella; Phillips, Renae; Swaffer, Brooke; Monis, Paul

    2015-05-15

    Cryptosporidium continues to be problematic for the water industry, with risk assessments often indicating that treatment barriers may fail under extreme conditions. However, risk analyses have historically used oocyst densities and not considered either oocyst infectivity or species/genotype, which can result in an overestimation of risk if the oocysts are not human infective. We describe an integrated assay for determining oocyst density, infectivity, and genotype from a single-sample concentrate, an important advance that overcomes the need for processing multiple-grab samples or splitting sample concentrates for separate analyses. The assay incorporates an oocyst recovery control and is compatible with standard primary concentration techniques. Oocysts were purified from primary concentrates using immunomagnetic separation prior to processing by an infectivity assay. Plate-based cell culture was used to detect infectious foci, with a monolayer washing protocol developed to allow recovery and enumeration of oocysts. A simple DNA extraction protocol was developed to allow typing of any wells containing infectious Cryptosporidium. Water samples from a variety of source water and wastewater matrices, including a semirural catchment, wastewater, an aquifer recharge site, and storm water, were analyzed using the assay. Results demonstrate that the assay can reliably determine oocyst densities, infectivity, and genotype from single-grab samples for a variety of water matrices and emphasize the varying nature of Cryptosporidium risk extant throughout source waters and wastewaters. This assay should therefore enable a more comprehensive understanding of Cryptosporidium risk for different water sources, assisting in the selection of appropriate risk mitigation measures. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

  13. Risk analysis in radiation treatment: Application of a new taxonomic structure

    International Nuclear Information System (INIS)

    Ekaette, Edidiong U.; Lee, Robert C.; Cooke, David L.; Kelly, Karie-Lynn; Dunscombe, Peter B.

    2006-01-01

    Background and purpose: Radiation treatment (RT) for cancer is susceptible to clinical incidents resulting from human errors and equipment failures. A systematic approach to collecting and processing incidents is required to manage patient risks. We describe the application of a new taxonomic structure for RT that supports risk analysis and organizational learning. Materials and methods: A systematic analysis of the RT process identified five process domains. Within each domain we defined incident type groups. We then constructed a database reflecting this taxonomic structure and populated it with incidents from publicly available sources. Querying this database provides insights into the nature and relative frequency of incidents in RT. Results: There are relatively few reports of incidents in the Prescription domain compared with the Preparation and Treatment domains. There are also fewer reports of systematic and infrastructure incidents in comparison to sporadic and process incidents. Infrastructure incidents are mainly systematic in nature, while process incidents are more likely to be sporadic. Conclusions: The lack of a standard, systems-oriented framework for incident reporting makes it difficult to learn from existing incident report sources. A clear understanding of the potential consequences and relationships between different incident types will guide incident reporting, resource allocation, and risk management efforts

  14. Design, fabrication, and calibration of curved integral coils for measuring transfer function, uniformity, and effective length of LBL ALS [Lawrence Berkeley Laboratory Advanced Light Source] Booster Dipole Magnets

    International Nuclear Information System (INIS)

    Green, M.I.; Nelson, D.; Marks, S.; Gee, B.; Wong, W.; Meneghetti, J.

    1989-03-01

    A matched pair of curved integral coils has been designed, fabricated and calibrated at Lawrence Berkeley Laboratory for measuring Advanced Light Source (ALS) Booster Dipole Magnets. Distinctive fabrication and calibration techniques are described. The use of multifilar magnet wire in fabrication integral search coils is described. Procedures used and results of AC and DC measurements of transfer function, effective length and uniformity of the prototype booster dipole magnet are presented in companion papers. 8 refs

  15. Taxonomic Studies on the Genus Arnebia Forssk. (Boraginaceae in India

    Directory of Open Access Journals (Sweden)

    Kumar Ambrish

    2014-12-01

    Full Text Available The genus Arnebia Forssk. in India is taxonomically studied based on field surveys, collection of live plants, consultation of herbarium and literature. The genus is represented in India by 10 taxa including 8 species and 2 varieties viz., Arnebia bhattacharyyae K. Ambrish & S.K. Srivast., A. benthamii (Wall. ex G. Don I.M. Johnst., A. euchroma ( Royle I.M. Johnst., A. guttata Bunge, A. hispidissima (Sieber ex Lehm. A.DC., A. linearifolia A.DC., A. griffithii Boiss., A. nandadeviensis K. Chandra Sek. & R.S. Rawal , A. euchroma var. grandis (Bornm. Kazmi and A. guttata var. thomsonii (C.B. Clarke Kazmi, distributed in Jammu & Kashmir, Himachal Pradesh and Uttarakhand in North-West Himalaya to Uttar Pradesh, Punjab and Rajasthan in India. Dichotomous keys to all the species in India along with taxonomic description, distribution, illustrations and images of most of the species including type and their economic importance are provided.

  16. A taxonomic synopsis of Altingiaceae with nine new combinations

    Directory of Open Access Journals (Sweden)

    Stefanie Ickert-Bond

    2013-12-01

    Full Text Available A taxonomic synopsis of the Altingiaceae is presented, including the taxonomic enumeration and distribution of 15 recognized species based on studies of 1,500 specimens from 24 herbaria throughout the distributional range of the taxa. Previous phylogenetic analyses based on several molecular markers have shown that Altingia and Semiliquidambar are nested within Liquidambar. All Altingia and Semiliquidambar species are now formally transferred to Liquidambar, which has the nomenclatural priority. The following nine new combinations are herein made: Liquidambar cambodiana (Lecomte Ickert-Bond & J. Wen, L. caudata (H. T. Chang Ickert-Bond & J. Wen, L. chingii (Metcalf Ickert-Bond & J. Wen, L. gracilipes (Hemsl. Ickert-Bond & J. Wen, L. multinervis (Cheng Ickert-Bond & J. Wen, L. obovata (Merrill & Chun Ickert-Bond & J. Wen, L. poilanei (Tardieu Ickert-Bond & J. Wen, L. siamensis (Craib Ickert-Bond & J. Wen, and L. yunnanensis (Rehder & Wilson Ickert-Bond & J. Wen.

  17. Partial migration in fishes: definitions, methodologies and taxonomic distribution

    DEFF Research Database (Denmark)

    Chapman, B B; Skov, C; Hulthén, K

    2012-01-01

    published. In addition, previous work and synthesis has been hampered by a varied lexicon associated with this phenomenon in fishes. In this review, definitions and important concepts in partial migration research are discussed, and a classification system of the different forms of partial migration......Partial migration, where populations are composed of both migratory and resident individuals, is extremely widespread across the animal kingdom. Researchers studying fish movements have long recognized that many fishes are partial migrants, however, no detailed taxonomic review has ever been...... in fishes introduced. Next, a detailed taxonomic overview of partial migration in this group is considered. Finally, methodological approaches that ichthyologists can use to study this fascinating phenomenon are reviewed. Partial migration is more widespread amongst fishes than previously thought, and given...

  18. 'Integration'

    DEFF Research Database (Denmark)

    Olwig, Karen Fog

    2011-01-01

    , while the countries have adopted disparate policies and ideologies, differences in the actual treatment and attitudes towards immigrants and refugees in everyday life are less clear, due to parallel integration programmes based on strong similarities in the welfare systems and in cultural notions...... of equality in the three societies. Finally, it shows that family relations play a central role in immigrants’ and refugees’ establishment of a new life in the receiving societies, even though the welfare society takes on many of the social and economic functions of the family....

  19. Standardizing metadata and taxonomic identification in metabarcoding studies.

    Science.gov (United States)

    Tedersoo, Leho; Ramirez, Kelly S; Nilsson, R Henrik; Kaljuvee, Aivi; Kõljalg, Urmas; Abarenkov, Kessy

    2015-01-01

    High-throughput sequencing-based metabarcoding studies produce vast amounts of ecological data, but a lack of consensus on standardization of metadata and how to refer to the species recovered severely hampers reanalysis and comparisons among studies. Here we propose an automated workflow covering data submission, compression, storage and public access to allow easy data retrieval and inter-study communication. Such standardized and readily accessible datasets facilitate data management, taxonomic comparisons and compilation of global metastudies.

  20. Support Vector Machine Based Tool for Plant Species Taxonomic Classification

    OpenAIRE

    Manimekalai .K; Vijaya.MS

    2014-01-01

    Plant species are living things and are generally categorized in terms of Domain, Kingdom, Phylum, Class, Order, Family, Genus and name of Species in a hierarchical fashion. This paper formulates the taxonomic leaf categorization problem as the hierarchical classification task and provides a suitable solution using a supervised learning technique namely support vector machine. Features are extracted from scanned images of plant leaves and trained using SVM. Only class, order, family of plants...

  1. La confusa taxonomía de Cryptosporidium

    Directory of Open Access Journals (Sweden)

    Gregorio Pérez-Cordón

    2006-10-01

    Full Text Available Los últimos descubrimientos en la biología y filogenética de Cryptosporidium refuerzan la necesidad de una exhaustiva revisión del ciclo de vida y la taxonomía de este parásito. Tanto futuros estudios de cultivo in vitro e in vivo así como estudios moleculares y genéticos permitirán avanzar en el profundo conocimiento de este interesante parásito.

  2. A taxonomic revision of the genus Rafnia Thunb. (Fabaceae, Crotalarieae)

    OpenAIRE

    2012-01-01

    M.Sc. A taxonomic revision of the genus Rafnia Thunb. (= Oedmannia Thunb., Vascoa DC., Pelecynthis E. Mey), a relatively poorly known papilionoid legume genus, is presented. Rafnia (family Fabaceae, tribe Crotalarieae) is subendemic to the fynbos region of the Western and Eastern Cape Provinces of South Africa, with one species having a distribution area reaching into KwaZulu-Natal. The species delimitation has been unsatisfactory, and the relationships among the taxa uncertain. Rafnia is ...

  3. Recent Advances and Field Trial Results Integrating Cosmic Ray Muon Tomography with Other Data Sources for Mineral Exploration

    Science.gov (United States)

    Schouten, D.

    2015-12-01

    CRM GeoTomography Technologies, Inc. is leading the way in applying muon tomography to discovery and definition of dense ore bodies for mineral exploration and resource estimation. We have successfully imaged volcanogenic massive sulfide (VMS) deposits at mines in North America using our suite of field-proven muon tracking detectors, and are at various stages of development for other applications. Recently we developed in-house inversion software that integrates data from assays, surface and borehole gravity, and underground muon flux measurements. We have found that the differing geophysical data sources provide complementary information and that dramatic improvements in inversion results are attained using various inversion performance metrics related to the excess tonnage of the mineral deposits, as well as their spatial extents and locations. This presentation will outline field tests of muon tomography performed by CRM Geotomography in some real world examples, and will demonstrate the effectiveness of joint muon tomography, assay and gravity inversion techniques in field tests (where data are available) and in simulations.

  4. Geo-Parcel Based Crop Identification by Integrating High Spatial-Temporal Resolution Imagery from Multi-Source Satellite Data

    Directory of Open Access Journals (Sweden)

    Yingpin Yang

    2017-12-01

    Full Text Available Geo-parcel based crop identification plays an important role in precision agriculture. It meets the needs of refined farmland management. This study presents an improved identification procedure for geo-parcel based crop identification by combining fine-resolution images and multi-source medium-resolution images. GF-2 images with fine spatial resolution of 0.8 m provided agricultural farming plot boundaries, and GF-1 (16 m and Landsat 8 OLI data were used to transform the geo-parcel based enhanced vegetation index (EVI time-series. In this study, we propose a piecewise EVI time-series smoothing method to fit irregular time profiles, especially for crop rotation situations. Global EVI time-series were divided into several temporal segments, from which phenological metrics could be derived. This method was applied to Lixian, where crop rotation was the common practice of growing different types of crops, in the same plot, in sequenced seasons. After collection of phenological features and multi-temporal spectral information, Random Forest (RF was performed to classify crop types, and the overall accuracy was 93.27%. Moreover, an analysis of feature significance showed that phenological features were of greater importance for distinguishing agricultural land cover compared to temporal spectral information. The identification results indicated that the integration of high spatial-temporal resolution imagery is promising for geo-parcel based crop identification and that the newly proposed smoothing method is effective.

  5. Integrated Verification Experiment data collected as part of the Los Alamos National Laboratory's Source Region Program

    Energy Technology Data Exchange (ETDEWEB)

    Whitaker, R.W.; Noel, S.D.

    1992-12-01

    The summary report by Tom Weaver gives the overall background for the series of IVE (Integrated Verification Experiment) experiments including information on the full set of measurements made. This appendix presents details of the infrasound data for the and discusses certain aspects of a few special experiments. Prior to FY90, the emphasis of the Infrasound Program was on underground nuclear test (UGT) detection and yield estimation. During this time the Infrasound Program was a separate program at Los Alamos, and it was suggested to DOE/OAC that a regional infrasound network be established around NTS. The IVE experiments took place in a time frame that allowed simultaneous testing of possible network sites and examination of propagation in different directions. Whenever possible, infrasound stations were combined with seismic stations so that a large number could be efficiently fielded. The regional infrasound network was not pursued by DOE, as world events began to change the direction of verification toward non-proliferation. Starting in FY90 the infrasound activity became part of the Source Region Program which has a goal of understanding how energy is transported from the UGT to a variety of measurement locations.

  6. Radio frequency glow discharge source with integrated voltage and current probes used for evaluation of discharge parameters

    International Nuclear Information System (INIS)

    Wilken, L.; Hoffmann, V.; Wetzig, K.

    2006-01-01

    A radio frequency (rf) Grimm-type glow discharge source for the chemical analysis of solid samples, with integrated voltage and current probes, was developed. All elements of a plasma equivalent circuit are determined from the measured current-voltage characteristics. The procedure is based on the independent evaluation of the ion current and electron current region. The physical meaning of the parameters is investigated by comparisons with measurements from dc glow discharges. We found that the reduced rf current of the powered electrode is comparable to the reduced current in dc discharges. A formula is developed that corrects the reduced current due to gas heating. The sheath thickness at the powered rf electrode is evaluated and is between 75 and 1100 μm. The voltage of the bulk plasma is in the range 2-15 V, and the resistance is between 30 and 400 Ω. The bulk plasma consumes about 3% of the total power, and the reduced voltage is comparable to the reduced electrical field in the positive column of direct current discharges. The sheath voltage at the grounded electrode is in the range 25-100 V, the capacities are between 10 and 400 pF, and the resistances are in the range 100 Ω-5000 Ω. We also found invariants for the evaluated sheath parameters

  7. Integrated Fuzzy ANP, Fuzzy VIKOR and goal programming for sourcing in a supply chain: A case study from cable industry

    Directory of Open Access Journals (Sweden)

    Masoud Rezaei

    2013-10-01

    Full Text Available In today’s competitive business environment, companies strive to increase their market shares. All companies clearly understand that they have to reach this goal by implementing cost effective methods and increase profits as much as possible. The cost of purchasing raw materials and component parts are significant portion of products in most manufacturing firms. Supplier selection and evaluation have been widely recognized to be one of the most substantial issues on material purchasing. In order to choose reliable suppliers it is necessary to have a trade-off between some tangible and intangible factors where some of them are in serious conflict. In this paper, an integrated technique of analytical network process improved by VIKOR and fuzzy sets theory and multi-objective mixed integer nonlinear programming is proposed to determine the appropriate suppliers. The proposed model of this paper also determines the order quantity allocated to each supplier in the case of multiple sourcing, multiple products and multi-period time horizon for an Iranian cable company.

  8. Integrated assessment of air pollution by metals and source apportionment using ryegrass (Lolium multiflorum Lam.) in southern Brazil.

    Science.gov (United States)

    Illi, Júlia Carolina; Vancetta, Tafael; Alves, Darlan Daniel; Osório, Daniela Montanari Migliavacca; Bianchin, Liane; de Quevedo, Daniela Müller; Juchem, Fernando

    2017-01-01

    One of the biggest environmental problems existing today is air pollution, which is characterized by the presence of toxic gases and metal pollutants, the latter of which is generally associated with emissions of particulate matter (PM) from industries or automotive vehicles. Biomonitoring is a method that can be used to assess air pollution levels because it makes it possible to determine what effects these air pollutants cause in living organisms and their responses. The species Lolium multiflorum Lam., known as ryegrass, is considered a good bioindicator of metals, since it accumulates these substances during exposure. This study proposes to conduct an integrated assessment of air quality using two different monitoring methodologies: biomonitoring with L. multiflorum and active monitoring in areas with different levels of urbanization and industrialization. Concentrations found in ryegrass plants revealed high levels of Pb, Cr, Zn, and Cu, indicating that vehicular and industrial emissions were the main sources of pollution. Analysis of PM also revealed soot and biogenic particles, which can transport metals. Therefore, with the proposed method, the anthropogenic impact on air pollution in the investigated area could be clearly demonstrated.

  9. High taxonomic variability despite stable functional structure across microbial communities.

    Science.gov (United States)

    Louca, Stilianos; Jacques, Saulo M S; Pires, Aliny P F; Leal, Juliana S; Srivastava, Diane S; Parfrey, Laura Wegener; Farjalla, Vinicius F; Doebeli, Michael

    2016-12-05

    Understanding the processes that are driving variation of natural microbial communities across space or time is a major challenge for ecologists. Environmental conditions strongly shape the metabolic function of microbial communities; however, other processes such as biotic interactions, random demographic drift or dispersal limitation may also influence community dynamics. The relative importance of these processes and their effects on community function remain largely unknown. To address this uncertainty, here we examined bacterial and archaeal communities in replicate 'miniature' aquatic ecosystems contained within the foliage of wild bromeliads. We used marker gene sequencing to infer the taxonomic composition within nine metabolic functional groups, and shotgun environmental DNA sequencing to estimate the relative abundances of these groups. We found that all of the bromeliads exhibited remarkably similar functional community structures, but that the taxonomic composition within individual functional groups was highly variable. Furthermore, using statistical analyses, we found that non-neutral processes, including environmental filtering and potentially biotic interactions, at least partly shaped the composition within functional groups and were more important than spatial dispersal limitation and demographic drift. Hence both the functional structure and taxonomic composition within functional groups of natural microbial communities may be shaped by non-neutral and roughly separate processes.

  10. Taxonomic and functional composition of arthropod assemblages across contrasting Amazonian forests.

    Science.gov (United States)

    Lamarre, Greg P A; Hérault, Bruno; Fine, Paul V A; Vedel, Vincent; Lupoli, Roland; Mesones, Italo; Baraloto, Christopher

    2016-01-01

    Arthropods represent most of global biodiversity, with the highest diversity found in tropical rain forests. Nevertheless, we have a very incomplete understanding of how tropical arthropod communities are assembled. We conducted a comprehensive mass sampling of arthropod communities within three major habitat types of lowland Amazonian rain forest, including terra firme clay, white-sand and seasonally flooded forests in Peru and French Guiana. We examined how taxonomic and functional composition (at the family level) differed across these habitat types in the two regions. The overall arthropod community composition exhibited strong turnover among habitats and between regions. In particular, seasonally flooded forest habitats of both regions comprised unique assemblages. Overall, 17·7% (26 of 147) of arthropod families showed significant preferences for a particular habitat type. We present a first reproducible arthropod functional classification among the 147 taxa based on similarity among 21 functional traits describing feeding source, major mouthparts and microhabitats inhabited by each taxon. We identified seven distinct functional groups whose relative abundance contrasted strongly across the three habitats, with sap and leaf feeders showing higher abundances in terra firme clay forest. Our novel arthropod functional classification provides an important complement to link these contrasting patterns of composition to differences in forest functioning across geographical and environmental gradients. This study underlines that both environment and biogeographical processes are responsible for driving arthropod taxonomic composition while environmental filtering is the main driver of the variance in functional composition. © 2015 The Authors. Journal of Animal Ecology © 2015 British Ecological Society.

  11. MEAPA - Integrated methodology for alternative energy sources map pin in the State of Para - Brazil; MEAPA - Metodologias integradas para o mapeamento de energias alternativas no Estado do Para

    Energy Technology Data Exchange (ETDEWEB)

    Monteiro, Claudio; Lopes, J. Pecas; Va, Kowk P.; Herold, Helmut [Instituto de Engenharia de Sistemas e Computadores (INESC), Porto (Portugal). Power System Unit. E-mail: cmonteiro@inescn.pt; Rocha, Brigida; Pinheiro, Helten; Rocha, Olavo [Para Univ., Belem, PA (Brazil). Dept. de Engenharia Eletrica. E-mail: rocha@interconect.com.br; Silva, Isa O. [Para Univ., Belem, PA (Brazil). Dept. de Meteorologia; Moraes, Sinfronio [Para Univ., Belem, PA (Brazil). Dept. de Mecanica

    1999-07-01

    This paper describes the MEAPA project for the development of methodologies which support the renewable energy sources integration in the Marajo island - Para - Brazil. The methodologies used will be described including the construction of a geographical database, renewable resources (wind, solar and biomass) mapping, transport costs, cost of electric power produced by various systems and electrification sceneries and comparison of electrification solutions.

  12. Integrated management of waterbirds: Beyond the conventional

    Science.gov (United States)

    Erwin, R.M.; Parsons, Katharine C.; Brown, Stephen C.; Erwin, R. Michael; Czech, Helen A.; Coulson, John C.

    2002-01-01

    Integrated waterbird management over the past few decades has implicitly referred to methods for managing wetlands that usually attempt to enhance habitat for taxonomic groups such as shorebirds and wading birds, in addition to waterfowl, the traditional focus group. Here I describe five elements of integration in management: taxonomic, spatial, temporal, population and habitat, and multiple-use management objectives. Spatial integration simply expands the scale of management concern. Rather than emphasizing management on a very limited number of impoundments or wetlands in small refuges or wildlife management areas, the vision is beginning to shift to connectivity within larger landscapes on the order of many square kilometers as telemetry data on daily and seasonal movements for many species become available. Temporal integration refers to the potential for either simultaneous management for waterbirds and commercial 'crops' (e.g., crayfish and rice) or for temporally-staggered management such as row crop production in spring-summer growing seasons and waterbird management on fallow fields in the non-growing (winter) season. Integrating population dynamics with habitats has become a major research focus over the past decade. Identifying which wetlands are ?sources? or ?sinks? for specific populations provides managers with critical information about effective management. Further, the applications of spatially explicit population models place heavy demands on researchers to identify use patterns for breeding and dispersing individuals by age, sex, and reproductive class. Population viability analysis models require much the same information. Finally, multiple-use management integration refers to trying to optimize the uses of wetlands, when only one (perhaps secondary) use may include waterbird management. Depending upon the ownership and primary land use of a particular parcel of land containing wetlands and/or water bodies, managing for waterbirds may be an

  13. Comparing the temporal dynamics of thematic and taxonomic processing using event-related potentials.

    Directory of Open Access Journals (Sweden)

    Olivera Savic

    Full Text Available We report the results of a study comparing the temporal dynamics of thematic and taxonomic knowledge activation in a picture-word priming paradigm using event-related potentials. Although we found no behavioral differences between thematic and taxonomic processing, ERP data revealed distinct patterns of N400 and P600 amplitude modulation for thematic and taxonomic priming. Thematically related target stimuli elicited less negativity than taxonomic targets between 280-460 ms after stimulus onset, suggesting easier semantic processing of thematic than taxonomic relationships. Moreover, P600 mean amplitude was significantly increased for taxonomic targets between 520-600 ms, consistent with a greater need for stimulus reevaluation in that condition. These results offer novel evidence in favor of a dissociation between thematic and taxonomic thinking in the early phases of conceptual evaluation.

  14. Comparing the temporal dynamics of thematic and taxonomic processing using event-related potentials.

    Science.gov (United States)

    Savic, Olivera; Savic, Andrej M; Kovic, Vanja

    2017-01-01

    We report the results of a study comparing the temporal dynamics of thematic and taxonomic knowledge activation in a picture-word priming paradigm using event-related potentials. Although we found no behavioral differences between thematic and taxonomic processing, ERP data revealed distinct patterns of N400 and P600 amplitude modulation for thematic and taxonomic priming. Thematically related target stimuli elicited less negativity than taxonomic targets between 280-460 ms after stimulus onset, suggesting easier semantic processing of thematic than taxonomic relationships. Moreover, P600 mean amplitude was significantly increased for taxonomic targets between 520-600 ms, consistent with a greater need for stimulus reevaluation in that condition. These results offer novel evidence in favor of a dissociation between thematic and taxonomic thinking in the early phases of conceptual evaluation.

  15. Evaluation of stormwater micropollutant source control and end-of-pipe control strategies using an uncertainty-calibrated integrated dynamic simulation model

    DEFF Research Database (Denmark)

    Vezzaro, Luca; Sharma, Anitha Kumari; Ledin, Anna

    2015-01-01

    (copper, zinc) and organic compounds (fluoranthene). MP fluxes were estimated by using an integrated dynamic model, in combination with stormwater quality measurements. MP sources were identified by using GIS land usage data, runoff quality was simulated by using a conceptual accumulation/washoff model......The estimation of micropollutant (MP) fluxes in stormwater systems is a fundamental prerequisite when preparing strategies to reduce stormwater MP discharges to natural waters. Dynamic integrated models can be important tools in this step, as they can be used to integrate the limited data provided...... by monitoring campaigns and to evaluate the performance of different strategies based on model simulation results. This study presents an example where six different control strategies, including both source-control and end-of-pipe treatment, were compared. The comparison focused on fluxes of heavy metals...

  16. CMMI for Systems Engineering, Software Engineering, Integrated Product and Process Development, and Supplier Sourcing, Version 1.1 (CMMI-SE/SW/IPPD/SS, V1.1) Continuous Representation

    National Research Council Canada - National Science Library

    2002-01-01

    .... Concepts covered by this model include systems engineering, software engineering, integrated product and process development, and supplier sourcing as well as traditional CMM concepts such as process...

  17. Taxonomic and Thematic Organisation of Proper Name Conceptual Knowledge

    Directory of Open Access Journals (Sweden)

    Sebastian J. Crutch

    2011-01-01

    Full Text Available We report the investigation of the organisation of proper names in two aphasic patients (NBC and FBI. The performance of both patients on spoken word to written word matching tasks was inconsistent, affected by presentation rate and semantic relatedness of the competing responses, all hallmarks of a refractory semantic access dysphasia. In a series of experiments we explored the semantic relatedness effects within their proper name vocabulary, including brand names and person names. First we demonstrated the interaction between very fine grain organisation and personal experience, with one patient with a special interest in the cinema demonstrating higher error rates when identifying the names of actors working in a similar film genre (e.g. action movies: Arnold Schwarzenegger, Bruce Willis, Sylvester Stallone, Mel Gibson than those working in different genres (e.g. Arnold Schwarzenegger, Gregory Peck, Robin Williams, Gene Kelly. Second we compared directly two potential principles of semantic organisation – taxonomic and thematic. Furthermore we considered these principles of organisation in the context of the individuals' personal knowledge base. We selected topics matching the interests and experience of each patient, namely cinema and literature (NBC and naval history (FBI. The stimulus items were arranged in taxonomic arrays (e.g. Jane Austen, Emily Bronte, Agatha Christie, thematic arrays (e.g. Jane Austen, Pride and Prejudice, Mr Darcy, and unrelated arrays (e.g. Jane Austen, Wuthering Heights, Hercule Poirot. We documented that different patterns of taxonomic and thematic organisation were constrained by whether the individual has limited knowledge, moderate knowledge or detailed knowledge of a particular vocabulary. It is suggested that moderate proper name knowledge is primarily organised by taxonomy whereas extensive experience results in a more detailed knowledge base in which theme is a powerful organising principle.

  18. Taxonomic and thematic organisation of proper name conceptual knowledge.

    Science.gov (United States)

    Crutch, Sebastian J; Warrington, Elizabeth K

    2011-01-01

    We report the investigation of the organisation of proper names in two aphasic patients (NBC and FBI). The performance of both patients on spoken word to written word matching tasks was inconsistent, affected by presentation rate and semantic relatedness of the competing responses, all hallmarks of a refractory semantic access dysphasia. In a series of experiments we explored the semantic relatedness effects within their proper name vocabulary, including brand names and person names. First we demonstrated the interaction between very fine grain organisation and personal experience, with one patient with a special interest in the cinema demonstrating higher error rates when identifying the names of actors working in a similar film genre (e.g., action movies: Arnold Schwarzenegger, Bruce Willis, Sylvester Stallone, Mel Gibson) than those working in different genres (e.g., Arnold Schwarzenegger, Gregory Peck, Robin Williams, Gene Kelly). Second we compared directly two potential principles of semantic organisation - taxonomic and thematic. Furthermore we considered these principles of organisation in the context of the individuals' personal knowledge base. We selected topics matching the interests and experience of each patient, namely cinema and literature (NBC) and naval history (FBI). The stimulus items were arranged in taxonomic arrays (e.g., Jane Austen, Emily Bronte, Agatha Christie), thematic arrays (e.g., Jane Austen, Pride and Prejudice, Mr Darcy), and unrelated arrays (e.g., Jane Austen, Wuthering Heights, Hercule Poirot). We documented that different patterns of taxonomic and thematic organisation were constrained by whether the individual has limited knowledge, moderate knowledge or detailed knowledge of a particular vocabulary. It is suggested that moderate proper name knowledge is primarily organised by taxonomy whereas extensive experience results in a more detailed knowledge base in which theme is a powerful organising principle.

  19. Species delimitation in taxonomically difficult fungi: the case of Hymenogaster.

    Directory of Open Access Journals (Sweden)

    Benjamin Stielow

    2011-01-01

    Full Text Available False truffles are ecologically important as mycorrhizal partners of trees and evolutionarily highly interesting as the result of a shift from epigeous mushroom-like to underground fruiting bodies. Since its first description by Vittadini in 1831, inappropriate species concepts in the highly diverse false truffle genus Hymenogaster has led to continued confusion, caused by a large variety of prevailing taxonomical opinions.In this study, we reconsidered the species delimitations in Hymenogaster based on a comprehensive collection of Central European taxa comprising more than 140 fruiting bodies from 20 years of field work. The ITS rDNA sequence dataset was subjected to phylogenetic analysis as well as clustering optimization using OPTSIL software.Among distinct species concepts from the literature used to create reference partitions for clustering optimization, the broadest concept resulted in the highest agreement with the ITS data. Our results indicate a highly variable morphology of H. citrinus and H. griseus, most likely linked to environmental influences on the phenology (maturity, habitat, soil type and growing season. In particular, taxa described in the 19(th century frequently appear as conspecific. Conversely, H. niveus appears as species complex comprising seven cryptic species with almost identical macro- and micromorphology. H. intermedius and H. huthii are described as novel species, each of which with a distinct morphology intermediate between two species complexes. A revised taxonomy for one of the most taxonomically difficult genera of Basidiomycetes is proposed, including an updated identification key. The (semi-automated selection among species concepts used here is of importance for the revision of taxonomically problematic organism groups in general.

  20. Taxonomic revision of Asian genus Glyptopetalum Thwaites (Celastraceae R. Br.

    Directory of Open Access Journals (Sweden)

    Ivan A. Savinov

    2014-12-01

    Full Text Available Taxonomic survey of Asian genus Glyptopetalum Thwaites (Celastraceae R. Br. is presented. Thirty five species taxa of Glyptopetalum are accepted, including one new species, G.  vidalii I. Savinov (Laos, Thailand, a new record for China, G. tonkinense Pitard (SE Yunnan and a new record for Cambodia,               G. quadrangulare Prain ex King, a new record for Indonesia – G. euonymoides Merr. and a new record for Philippines, Mindanao island – G. loheri Merr. 

  1. prepare_taxa_charts.py: A Python program to automate generation of publication ready taxonomic pie chart images from QIIME.

    Science.gov (United States)

    Lakhujani, Vijay; Badapanda, Chandan

    2017-06-01

    QIIME (Quantitative Insights Into Microbial Ecology) is one of the most popular open-source bioinformatics suite for performing metagenome, 16S rRNA amplicon and Internal Transcribed Spacer (ITS) data analysis. Although, it is very comprehensive and powerful tool, it lacks a method to provide publication ready taxonomic pie charts. The script plot_taxa_summary . py bundled with QIIME generate a html file and a folder containing taxonomic pie chart and legend as separate images. The images have randomly generated alphanumeric names. Therefore, it is difficult to associate the pie chart with the legend and the corresponding sample identifier. Even if the option to have the legend within the html file is selected while executing plot_taxa_summary . py , it is very tedious to crop a complete image (having both the pie chart and the legend) due to unequal image sizes. It requires a lot of time to manually prepare the pie charts for multiple samples for publication purpose. Moreover, there are chances of error while identifying the pie chart and legend pair due to random alphanumeric names of the images. To bypass all these bottlenecks and make this process efficient, we have developed a python based program, prepare_taxa_charts . py , to automate the renaming, cropping and merging of taxonomic pie chart and corresponding legend image into a single, good quality publication ready image. This program not only augments the functionality of plot_taxa_summary . py but is also very fast in terms of CPU time and user friendly.

  2. TaxCollector: Modifying Current 16S rRNA Databases for the Rapid Classification at Six Taxonomic Levels

    Directory of Open Access Journals (Sweden)

    Eric W. Triplett

    2010-07-01

    Full Text Available The high level of conservation of 16S ribosomal RNA gene (16S rRNA in all Prokaryotes makes this gene an ideal tool for the rapid identification and classification of these microorganisms. Databases such as the Ribosomal Database Project II (RDP-II and the Greengenes Project offer access to sets of ribosomal RNA sequence databases useful in identification of microbes in a culture-independent analysis of microbial communities. However, these databases do not contain all of the taxonomic levels attached to the published names of the bacterial and archaeal sequences. TaxCollector is a set of scripts developed in Python language that attaches taxonomic information to all 16S rRNA sequences in the RDP-II and Greengenes databases. These modified databases are referred to as TaxCollector databases, which when used in conjunction with BLAST allow for rapid classification of sequences from any environmental or clinical source at six different taxonomic levels, from domain to species. The TaxCollector database prepared from the RDP-II database is an important component of a new 16S rRNA pipeline called PANGEA. The usefulness of TaxCollector databases is demonstrated with two very different datasets obtained using samples from a clinical setting and an agricultural soil. The six TaxCollector scripts are freely available on http://taxcollector.sourceforge.net and on http://www.microgator.org.

  3. LASER APPLICATIONS AND OTHER TOPICS IN QUANTUM ELECTRONICS: Laser-induced extreme UV radiation sources for manufacturing next-generation integrated circuits

    Science.gov (United States)

    Borisov, V. M.; Vinokhodov, A. Yu; Ivanov, A. S.; Kiryukhin, Yu B.; Mishchenko, V. A.; Prokof'ev, A. V.; Khristoforov, O. B.

    2009-10-01

    The development of high-power discharge sources emitting in the 13.5±0.135-nm spectral band is of current interest because they are promising for applications in industrial EUV (extreme ultraviolet) lithography for manufacturing integrated circuits according to technological precision standards of 22 nm and smaller. The parameters of EUV sources based on a laser-induced discharge in tin vapours between rotating disc electrodes are investigated. The properties of the discharge initiation by laser radiation at different wavelengths are established and the laser pulse parameters providing the maximum energy characteristics of the EUV source are determined. The EUV source developed in the study emits an average power of 276 W in the 13.5±0.135-nm spectral band on conversion to the solid angle 2π sr in the stationary regime at a pulse repetition rate of 3000 Hz.

  4. Economics of intermittent renewable energy sources: four essays on large-scale integration into European power systems

    International Nuclear Information System (INIS)

    Henriot, Arthur

    2014-01-01

    This thesis centres on issues of economic efficiency originating from the large-scale development of intermittent renewable energy sources (RES) in Europe. The flexible resources that are necessary to cope with their specificities (variability, low-predictability, site specificity) are already known, but adequate signals are required to foster efficient operation and investment in these resources. A first question is to what extent intermittent RES can remain out of the market at times when they are the main driver of investment and operation in power systems. A second question is whether the current market design is adapted to their specificities. These two questions are tackled in four distinct contributions.The first chapter is a critical literature review. This analysis introduces and confronts two (often implicit) paradigms for RES integration. It then identifies and discusses a set of evolutions required to develop a market design adapted to the large-scale development of RES, such as new definitions of the products exchanged and reorganisation of the sequence of electricity markets.In the second chapter, an analytical model is used to assess the potential of intra-day markets as a flexibility provider to intermittent RES with low production predictability. This study highlights and demonstrates how the potential of intra-day markets is heavily dependent on the evolution of the forecast errors.The third chapter focuses on the benefits of curtailing the production by intermittent RES, as a tool to smooth out their variability and reduce overall generation costs. Another analytical model is employed to anatomise the relationship between these benefits and a set of pivotal parameters. Special attention is also paid to the allocation of these benefits between the different stakeholders.In the fourth chapter, a numerical simulation is used to evaluate the ability of the European transmission system operators to tackle the investment wave required in order to

  5. Space and Terrestrial Power System Integration Optimization Code BRMAPS for Gas Turbine Space Power Plants With Nuclear Reactor Heat Sources

    Science.gov (United States)

    Juhasz, Albert J.

    2007-01-01

    In view of the difficult times the US and global economies are experiencing today, funds for the development of advanced fission reactors nuclear power systems for space propulsion and planetary surface applications are currently not available. However, according to the Energy Policy Act of 2005 the U.S. needs to invest in developing fission reactor technology for ground based terrestrial power plants. Such plants would make a significant contribution toward drastic reduction of worldwide greenhouse gas emissions and associated global warming. To accomplish this goal the Next Generation Nuclear Plant Project (NGNP) has been established by DOE under the Generation IV Nuclear Systems Initiative. Idaho National Laboratory (INL) was designated as the lead in the development of VHTR (Very High Temperature Reactor) and HTGR (High Temperature Gas Reactor) technology to be integrated with MMW (multi-megawatt) helium gas turbine driven electric power AC generators. However, the advantages of transmitting power in high voltage DC form over large distances are also explored in the seminar lecture series. As an attractive alternate heat source the Liquid Fluoride Reactor (LFR), pioneered at ORNL (Oak Ridge National Laboratory) in the mid 1960's, would offer much higher energy yields than current nuclear plants by using an inherently safe energy conversion scheme based on the Thorium --> U233 fuel cycle and a fission process with a negative temperature coefficient of reactivity. The power plants are to be sized to meet electric power demand during peak periods and also for providing thermal energy for hydrogen (H2) production during "off peak" periods. This approach will both supply electric power by using environmentally clean nuclear heat which does not generate green house gases, and also provide a clean fuel H2 for the future, when, due to increased global demand and the decline in discovering new deposits, our supply of liquid fossil fuels will have been used up. This is

  6. Integrated Web-Based Immersive Exploration of the Coordinated Canyon Experiment Data using Open Source STOQS Software

    Science.gov (United States)

    McCann, M. P.; Gwiazda, R.; O'Reilly, T. C.; Maier, K. L.; Lundsten, E. M.; Parsons, D. R.; Paull, C. K.

    2017-12-01

    The Coordinated Canyon Experiment (CCE) in Monterey Submarine Canyon has produced a wealth of oceanographic measurements whose analysis will improve understanding of turbidity current processes. Exploration of this data set, consisting of over 60 parameters from 15 platforms, is facilitated by using the open source Spatial Temporal Oceanographic Query System (STOQS) software (https://github.com/stoqs/stoqs). The Monterey Bay Aquarium Research Institute (MBARI) originally developed STOQS to help manage and visualize upper water column oceanographic measurements, but the generality of its data model permits effective use for any kind of spatial/temporal measurement data. STOQS consists of a PostgreSQL database and server-side Python/Django software; the client-side is jQuery JavaScript supporting AJAX requests to update a single page web application. The User Interface (UI) is optimized to provide a quick overview of data in spatial and temporal dimensions, as well as in parameter, platform, and data value space. A user may zoom into any feature of interest and select it, initiating a filter operation that updates the UI with an overview of all the data in the new filtered selection. When details are desired, radio buttons and checkboxes are selected to generate a number of different types of visualizations. These include color-filled temporal section and line plots, parameter-parameter plots, 2D map plots, and interactive 3D spatial visualizations. The Extensible 3D (X3D) standard and X3DOM JavaScript library provide the technology for presenting animated 3D data directly within the web browser. Most of the oceanographic measurements from the CCE (e.g. mooring mounted ADCP and CTD data) are easily visualized using established methods. However, unified integration and multiparameter display of several concurrently deployed sensors across a network of platforms is a challenge we hope to solve. Moreover, STOQS also allows display of data from a new instrument - the

  7. Apportioning sources of organic matter in streambed sediments: An integrated molecular and compound-specific stable isotope approach

    Energy Technology Data Exchange (ETDEWEB)

    Cooper, Richard J., E-mail: Richard.J.Cooper@uea.ac.uk [School of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ (United Kingdom); Pedentchouk, Nikolai; Hiscock, Kevin M.; Disdle, Paul [School of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ (United Kingdom); Krueger, Tobias [IRI THESys, Humboldt University, 10099 Berlin (Germany); Rawlins, Barry G. [British Geological Survey, Keyworth, Nottingham NG12 5GG (United Kingdom)

    2015-07-01

    apportionment of organic matter sources. Median organic matter contributions ranged from 22% to 52% for trees, 29% to 50% for herbaceous perennials, 17% to 34% for C{sub 3} graminoids and 3% to 7% for C{sub 4} graminoids. The results presented here clearly demonstrate the effectiveness of an integrated molecular and stable isotope analysis for quantitatively apportioning, with uncertainty, plant-specific organic matter contributions to streambed sediments via a Bayesian mixing model approach. - Highlights: • Organic contributions from trees, herbs and C{sub 3}/C{sub 4} graminoids are apportioned. • δ{sup 2}H provides strong discrimination between plant functional types. • δ{sup 13}C provides strong contrasts between C{sub 3} and C{sub 4} plants. • δ{sup 2}H and δ{sup 13}C values could not differentiate aquatic and terrestrial species. • n-Alkane ratios compliment isotopic discrimination.

  8. Una taxonomía de modelos de desarrollo sustentable

    Directory of Open Access Journals (Sweden)

    Darcy Tetreault

    2004-01-01

    Full Text Available Este ensayo pretende ayudar a desenmarañar una parte del discurso sobre desarrollo sustentable mediante la construcción de una taxonomía de modelos de desarrollo sustentable. La misma taxonomía se basa en una revisión literaria extensiva que en cierta medida privilegia la experiencia mexicana. De este modo, el ensayo presenta y compara tanto modelos normativos como positivos. Los modelos incluidos son el modelo dominante, el cual corresponde con la estrategia esbozada en el Informe Bruntland y Agenda 21; la ecología política, un modelo desarrollado por el economista francés Alain Lipietz; el modelo comunitario de desarrollo sustentable, cuyas raíces se encuentran en una escuela de pensamiento de la década de los setenta conocida como el “otro desarrollo”; el comercio justo, una experiencia cuyas raíces se encuentran en las comunidades indígenas de Oaxaca; la producción forestal industrial comunitaria, que ha sido puesta en práctica por varias comunidades forestales en el sur y el centro del país; el activismo ambiental, sobre todo respecto a los con- fl ictos locales que giran en torno al control de los recursos naturales; y la conservación basada en la comunidad, cuya manifestación principal es la reserva de la biosfera

  9. Phylogenetic analysis and taxonomic revision of Physodactylinae (Coleoptera, Elateridae

    Directory of Open Access Journals (Sweden)

    Simone Policena Rosa

    2014-01-01

    Full Text Available A phylogeny based on male morphological characters and taxonomic revision of the Physodactylinae genera are presented. The phylogenetic analysis based on 66 male characters resulted in the polyphyly of Physodactylinae which comprises four independent lineages. Oligostethius and Idiotropia from Africa were found to be sister groups. Teslasena from Brazil was corroborated as belonging to Cardiophorinae clade. The South American genera Physodactylus and Dactylophysus were found to be sister groups and phylogenetically related to Heterocrepidius species. The Oriental Toxognathus resulted as sister group of that clade plus (Dicrepidius ramicornis (Lissomus sp, Physorhynus erythrocephalus. Taxonomic revisions include diagnoses and redescriptions of genera and distributional records and illustrations of species. Key to species of Teslasena, Toxognathus, Dactylophysus and Physodactylus are also provided. Teslasena lucasi is synonymized with T. femoralis. A new species of Dactylophysus is described, D. hirtus sp. nov., and lectotypes are designated to non-conspecific D. mendax sensu Fleutiaux and Heterocrepidius mendax Candèze. Physodactylus niger is removed from synonymy under P. oberthuri; P. carreti is synonymized with P. niger; P. obesus and P. testaceus are synonymized with P. sulcatus. Nine new species are described in Physodactylus: P. asper sp. nov., P. brunneus sp. nov., P. chassaini sp. nov., P. flavifrons sp. nov., P. girardi sp. nov., P. gounellei sp. nov., P. latithorax sp. nov., P. patens sp. nov. and P. tuberculatus sp. nov.

  10. Taxonomic revision and phylogenetic analyses of rubber powdery mildew fungi.

    Science.gov (United States)

    Liyanage, K K; Khan, Sehroon; Brooks, Siraprapa; Mortimer, Peter E; Karunarathna, Samantha C; Xu, Jianchu; Hyde, Kevin D

    2017-04-01

    Powdery mildew is a fungal disease that infects a wide range of plants, including rubber trees, which results in a reduction of latex yields of up to 45%. The causal agent of powdery mildew of rubber was first described as Oidium heveae, but later morpho-molecular research suggested that in the past, O. heveae has been confused with Erysiphe quercicola. However, it is still under debate whether the causal agent should be classified as a species of the genus Erysiphe emend. or Golovinomyces and Podosphaera, respectively. Therefore, the aim of this study was to undertake the morpho-molecular characterization of powdery mildew species associated with rubber trees, thus resolving these taxonomic issues. Morphological observation under light and scanning electron microscopes (SEM) clearly identified two morphotypes of the rubber powdery mildew. With the support of morphological and phylogenetic data, one of the two morphotypes was identified as the asexual morph of E. quercicola, while the second morphotype is still insufficiently known and according to the morphological results obtained we assume that it might belong to the genus Golovinomyces. More collections and additional molecular data are required for final conclusions regarding the exact taxonomic position of the second morphotype of rubber powdery mildew and its relation to the name O. heveae. The haplotype analysis identified eight haplotype groups of E. quercicola indicating the high genetic diversity of the species. Copyright © 2017 Elsevier Ltd. All rights reserved.

  11. Taxonomic and ad hoc categorization within the two cerebral hemispheres.

    Science.gov (United States)

    Shen, Yeshayahu; Aharoni, Bat-El; Mashal, Nira

    2015-01-01

    A typicality effect refers to categorization which is performed more quickly or more accurately for typical than for atypical members of a given category. Previous studies reported a typicality effect for category members presented in the left visual field/right hemisphere (RH), suggesting that the RH applies a similarity-based categorization strategy. However, findings regarding the typicality effect within the left hemisphere (LH) are less conclusive. The current study tested the pattern of typicality effects within each hemisphere for both taxonomic and ad hoc categories, using words presented to the left or right visual fields. Experiment 1 tested typical and atypical members of taxonomic categories as well as non-members, and Experiment 2 tested typical and atypical members of ad hoc categories as well as non-members. The results revealed a typicality effect in both hemispheres and in both types of categories. Furthermore, the RH categorized atypical stimuli more accurately than did the LH. Our findings suggest that both hemispheres rely on a similarity-based categorization strategy, but the coarse semantic coding of the RH seems to facilitate the categorization of atypical members.

  12. Biotechnological application and taxonomical distribution of plant growth promoting actinobacteria.

    Science.gov (United States)

    Hamedi, Javad; Mohammadipanah, Fatemeh

    2015-02-01

    Plant growth promoting (PGP) bacteria are involved in various interactions known to affect plant fitness and soil quality, thereby increasing the productivity of agriculture and stability of soil. Although the potential of actinobacteria in antibiotic production is well-investigated, their capacity to enhance plant growth is not fully surveyed. Due to the following justifications, PGP actinobacteria (PGPA) can be considered as a more promising taxonomical group of PGP bacteria: (1) high numbers of actinobacteria per gram of soil and their filamentous nature, (2) genome dedicated to the secondary metabolite production (~5 to 10 %) is distinctively more than that of other bacteria and (3) number of plant growth promoter genera reported from actinobacteria is 1.3 times higher than that of other bacteria. Mechanisms by which PGPA contribute to the plant growth by association are: (a) enhancing nutrients availability, (b) regulation of plant metabolism, (c) decreasing environmental stress, (d) control of phytopathogens and (e) improvement of soil texture. Taxonomical and chemical diversity of PGPA and their biotechnological application along with their associated challenges are summarized in this paper.

  13. Correlation of resource plays and biodiversity patterns: accumulation of organic-rich shale tracks taxonomic turnover

    Science.gov (United States)

    Eoff, Jennifer D.

    2012-01-01

    Similar paleogeographic and paleotectonic settings characterize most self-sourced shale hydrocarbon plays. Their deposition occurred within similar orders of magnitude of eustatic events and during geologic periods characterized by “warm” (or transitional) climates and calcitic seas. In addition, the stratigraphic occurrence of shale plays parallels certain historical patterns of marine metazoan biodiversity. Such strong agreement among several correlation tools elucidates why these resources may be limited to discrete intervals of geological time. Correlation of self-sourced shale with biodiversity trends indicates that the factors controlling the deposition of marine organic matter may not be independent of those that induced taxonomic turnover. Paleoecological changes promoted accumulation and preservation of Type II kerogen. Deposition of self-sourced shale appears to correspond to reductions in absolute biodiversity and declining percentages of bioturbating taxa, with concomitant increases in proportions of pelagic taxa relative to infaunal and epifaunal organisms. Whereas upwelling and anoxia may have contributed to the deposition of kerogen in source rocks throughout much of the sedimentary record, diminished consumption of biomass by benthic metazoans likely augmented the preservation of organic carbon during deposition of this shale type. Rapid tectonic-plate reconfiguration induced coeval events, creating basins with sufficiently high rates of accommodation creation necessary to preserve additional organic material accumulating as the heterotrophic benthos suffered in response to rapidly changing environments. Combining sea-level curves, paleogeography, climate, and seawater chemistry provides a first-order approximation of the distribution of potential self-sourced shale in the geologic record. A model that predicts the stratigraphic distribution of self-sourced-shale deposition can aid in exploration of continuous hydrocarbon accumulations in self-sourced

  14. Habitat connectivity and local conditions shape taxonomic and functional diversity of arthropods on green roofs.

    Science.gov (United States)

    Braaker, Sonja; Obrist, Martin Karl; Ghazoul, Jaboury; Moretti, Marco

    2017-05-01

    Increasing development of urban environments creates high pressure on green spaces with potential negative impacts on biodiversity and ecosystem services. There is growing evidence that green roofs - rooftops covered with vegetation - can contribute mitigate the loss of urban green spaces by providing new habitats for numerous arthropod species. Whether green roofs can contribute to enhance taxonomic and functional diversity and increase connectivity across urbanized areas remains, however, largely unknown. Furthermore, only limited information is available on how environmental conditions shape green roof arthropod communities. We investigated the community composition of arthropods (Apidae, Curculionidae, Araneae and Carabidae) on 40 green roofs and 40 green sites at ground level in the city of Zurich, Switzerland. We assessed how the site's environmental variables (such as area, height, vegetation, substrate and connectivity among sites) affect species richness and functional diversity using generalized linear models. We used an extension of co-inertia analysis (RLQ) and fourth-corner analysis to highlight the mechanism underlying community assemblages across taxonomic groups on green roof and ground communities. Species richness was higher at ground-level sites, while no difference in functional diversity was found between green roofs and ground sites. Green roof arthropod diversity increased with higher connectivity and plant species richness, irrespective of substrate depth, height and area of green roofs. The species trait analysis reviewed the mechanisms related to the environmental predictors that shape the species assemblages of the different taxa at ground and roof sites. Our study shows the important contribution of green roofs in maintaining high functional diversity of arthropod communities across different taxonomic groups, despite their lower species richness compared with ground sites. Species communities on green roofs revealed to be characterized

  15. Integrative taxonomy and preliminary assessment of species limits in the Liolaemus walkeri complex (Squamata, Liolaemidae with descriptions of three new species from Peru

    Directory of Open Access Journals (Sweden)

    Cesar Aguilar

    2013-12-01

    Full Text Available Species delimitation studies based on integrative taxonomic approaches have received considerable attention in the last few years, and have provided the strongest hypotheses of species boundaries. We used three lines of evidence (molecular, morphological, and niche envelopes to test for species boundaries in Peruvian populations of the Liolaemus walkeri complex. Our results show that different lines of evidence and analyses are congruent in different combinations, for unambiguous delimitation of three lineages that were “hidden” within known species, and now deserve species status. Our phylogenetic analysis shows that L. walkeri, L. tacnae and the three new species are strongly separated from other species assigned to the alticolor-bibronii group. Few conventional morphological characters distinguish the new species from closely related taxa and this highlights the need to integrate other sources of data to erect strong hypothesis of species limits. A taxonomic key for known Peruvian species of the subgenus Lioalemus is provided.

  16. Design of a photonic integrated circuit (pic) in silicon on isolator (soi) technology for a novel chaotic integrated laser light source (chill)

    NARCIS (Netherlands)

    Westerveld, W.J.

    2009-01-01

    A light source with the brightness of a laser but the bandwidth of a LED is required for different fields of applications, such as inspection and metrology in the semiconductor industry, data encryption in telecommunications and LIDAR. Currently, this issue is addressed by so-called coherence

  17. Control of Grid Integrated Voltage Source Converters under Unbalanced Conditions: Development of an On-line Frequency-adaptive Virtual Flux-based Approach

    OpenAIRE

    Suul, Jon Are

    2012-01-01

    Three-Phase Voltage Source Converters (VSCs) are finding widespread applications in grid integrated power conversion systems. The control systems of such VSCs are in an increasing number of these applications required to operate during voltage disturbances and unbalanced conditions. Control systems designed for grid side voltagesensor- less operation are at the same time becoming attractive due to the continuous drive for cost reduction and increased reliability of VSCs, but are not commonly ...

  18. Integration of Remote Sensing and other public GIS data source to identify suitable zones for groundwater exploitation by manual drilling

    Science.gov (United States)

    Fussi, Fabio; Fava, Francesco; Di Mauro, Biagio; Bonomi, Tullia; Fumagalli, Letizia; DI Leo, Margherita; Hamidou Kane, Cheik; Faye, Gayane; Niang, Magatte; Wade, Souleye; Hamidou, Barry; Colombo, Roberto

    2015-04-01

    In several countries of the world the situation of water supply is still critical, far from the international target defined by United Nations for 2015 (Millenium Development Goals) and producing a huge impact on health and living condition of the population. Manual drilling (it means techniques to drill boreholes for water using human or animal power) is well known and practiced for centuries in many countries. In recent years, it has been considered a potential strategy to increase water access in poor countries and has raised the attention of national governments and international organizations. Manual drilling is applicable only where hydrogeological context is suitable, according to the following conditions: thick layers of unconsolidated sediments and shallow water table. Mapping of zones with suitable hydrogeological context has been carried out in several countries in Africa, but the results have evident limitations; previous methods are based on existing direct data and qualitative experience, leading to unreliable interpretation when direct data are limited. This research aims to develop a methodology to estimate shallow hydrogeological features and asses the distribution of suitable zones for manual drilling through the integration of indirect information obtained from remote sensing and other existing source of data. The research is carried out in two different study areas, in Senegal and Guinea (Western Africa), with semi-arid climate, moderate vegetation cover, unconsolidated sandy and clay deposits overlaying sedimentary and igneous rocks A set of variables have been obtained through processing of three categories of data, listed below: - geology, geomorphology, soil and land cover, obtained from existing thematic maps; - vegetation phenology, apparent thermal inertia, and soil moisture, obtained from analysis of multitemporal optical (MOD13Q1), thermal (MOD11A1), and radar (ASAR) remotely sensed data: -morphometric parameters, obtained from public

  19. Lago Maggiore oligotrophication as seen from the long-term evolution of its phytoplankton taxonomic size structure

    Directory of Open Access Journals (Sweden)

    Giuseppe MORABITO

    2009-02-01

    Full Text Available Due to the rapid and common deterioration of aquatic ecosystems, scientists and environmental protection organizations acutely need means capable of producing quantitative estimates for structural deformations of natural communities. Recently, very common biomass size spectra ignore community taxonomic composition, i.e., one of the most important kinds of biological information. Therefore, another very old, but rare in planktonology, method – the traditional taxonomic size spectrum (TTSS – can be helpful. TTSS, a specific form of size-frequency distribution of taxonomic units, reveals repeating patterns of deep subalpine Lago Maggiore (Italy phytoplankton taxonomic structure. The general TTSS pattern was safeguarded during 22 annual cycles (1984-2005, when many principal environmental characteristics were changed considerably during the lake oligotrophication. At the same time, the fine structure deformations of this pattern helped us divide the total oligotrophication process into several stages characterized by notable changes of TTSS peaks' proportions. These peak-height alterations were caused by pronounced changes in the species list and overall taxonomic diversity of the lake phytoplankton. The average cell volume decline was found. It was significantly correlated with the total phosphorus descending trend. This cell volume decline was produced by the addition of numerous species into the medium-and-small size fractions. Typical patterns of the stable and transitory stages were differentiated, which could be valuable for environmental protection and diagnostic applications. The central peak height difference between the stable and the transitory periods was statistically significant. Oligotrophication process decomposition into several more homogenous groups of years was supported by quantitative estimators produced by hierarchical cluster analysis. The highest level of the similarity measure (Pearson r in pairs of annual TTSS was

  20. Reducing the threat of RDDs. It's not enough to plug gaps in security systems for radioactive sources. Needed are integrated 'cradle-to-grave' controls to prevent high-risk sources from finding their way into the wrong hands

    International Nuclear Information System (INIS)

    Ferguson, C.D.

    2003-01-01

    Common radioactive materials, such as commercial radioactive sources used in medicine, industry, and scientific research, could fuel radiological dispersal devices (RDDs). While the IAEA has worked toward improving the security of radioactive sources long before the September 11 attacks, the IAEA moved quickly after this date to increase its efforts to prevent these materials from becoming tools of radiological terror. IAEA Director General Elbaradei has spoken often about the need for a 'cradle-to-grave' protection system for radioactive materials. While the IAEA and several Member States have striven to establish such a system, more thinking and work are still required to develop an integrated, layered, and cooperative defense system for radioactive source security. Security improvement should be prioritized on those radioactive sources that pose the greatest security risks. Although perfect security systems do not exist a layered security system should be established. This means that multiple barriers should be in place to lessen the likelihood of a radiological terror act. A summary of the findings of the International Conference on Security of Radioactive sources held in March 2003 is included in this paper

  1. Integrated characterization of natural attenuation of a PCE plume after thermal remediation of the source zone - incl. dual isotope and microbial techniques

    DEFF Research Database (Denmark)

    Broholm, Mette Martina

    dechlorination 1-1.5 km downstream the source area, where the plume descends into more reduced groundwater. The objective of the new (2014) study is to evaluate how the source remediation has impacted the plume and in particular the natural attenuation within the plume. A large monitoring campaign including...... down-gradient which co-inside with the reduction in redox conditions. The findings document a significant increase in cDCE degradation without accumulation of VC. This reduces the risk posed by the contaminant plume to the drinking water resource. This project is unique in the integrated...... area, resulted in the release of dissolved organic matter and some geochemical changes. This has had an effect on redox conditions and biodegradation by reductive dechlorination particularly in the near source area. However, also in the further downstream area of the plume redox and contaminant levels...

  2. XML schemas and mark-up practices of taxonomic literature.

    Science.gov (United States)

    Penev, Lyubomir; Lyal, Christopher Hc; Weitzman, Anna; Morse, David R; King, David; Sautter, Guido; Georgiev, Teodor; Morris, Robert A; Catapano, Terry; Agosti, Donat

    2011-01-01

    We review the three most widely used XML schemas used to mark-up taxonomic texts, TaxonX, TaxPub and taXMLit. These are described from the viewpoint of their development history, current status, implementation, and use cases. The concept of "taxon treatment" from the viewpoint of taxonomy mark-up into XML is discussed. TaxonX and taXMLit are primarily designed for legacy literature, the former being more lightweight and with a focus on recovery of taxon treatments, the latter providing a much more detailed set of tags to facilitate data extraction and analysis. TaxPub is an extension of the National Library of Medicine Document Type Definition (NLM DTD) for taxonomy focussed on layout and recovery and, as such, is best suited for mark-up of new publications and their archiving in PubMedCentral. All three schemas have their advantages and shortcomings and can be used for different purposes.

  3. Memory systems, processes, and tasks: taxonomic clarification via factor analysis.

    Science.gov (United States)

    Bruss, Peter J; Mitchell, David B

    2009-01-01

    The nature of various memory systems was examined using factor analysis. We reanalyzed data from 11 memory tasks previously reported in Mitchell and Bruss (2003). Four well-defined factors emerged, closely resembling episodic and semantic memory and conceptual and perceptual implicit memory, in line with both memory systems and transfer-appropriate processing accounts. To explore taxonomic issues, we ran separate analyses on the implicit tasks. Using a cross-format manipulation (pictures vs. words), we identified 3 prototypical tasks. Word fragment completion and picture fragment identification tasks were "factor pure," tapping perceptual processes uniquely. Category exemplar generation revealed its conceptual nature, yielding both cross-format priming and a picture superiority effect. In contrast, word stem completion and picture naming were more complex, revealing attributes of both processes.

  4. Effects of land use on taxonomic and functional diversity

    DEFF Research Database (Denmark)

    Hevia, Violeta; Carmona, Carlos P.; Azcárate, Francisco M.

    2016-01-01

    Land-use change is the major driver of biodiversity loss. However, taxonomic diversity (TD) and functional diversity (FD) might respond differently to land-use change, and this response might also vary depending on the biotic group being analysed. In this study, we compare the TD and FD of four......: the sampling unit scale and the site scale. Land-use intensity effects on TD and FD were quite different and highly varied among the four biotic groups, with no single clear pattern emerging that could be considered general for all organisms. Additive partitioning of species diversity revealed clear...... contrasting patterns between TD and FD in the percentage of variability observed at each spatial scale. While most variability in TD was found at the larger scales, irregardless of organism group and land-use type, most variability in FD was found at the smallest scale, indicating that species turnover among...

  5. Taxonomic status of two morphotypes of Coryphaena hippurus (Perciformes: Coryphaenidae

    Directory of Open Access Journals (Sweden)

    Alan Bonner

    2017-03-01

    Full Text Available ABSTRACT Two Coryphaena hippurus morphotypes (dourado and palombeta are found along the Brazilian coast and are considered by Rio de Janeiro’s fisherman and fishmongers as two different species. Furthermore, these morphotypes are commercialized under different values and suffer different fishing pressure. Therefore, a definition of their taxonomic status is an important economic and biological matter. In order to investigate this problem, allozyme electrophoresis method was undertaken for seventeen loci on 117 individuals of C. hippurus sampled at Cabo Frio/RJ (Brazil. The data indicate homogeneity between the morphotypes gene pools. Nevertheless, differences were found for genetic variation among dourado and palombeta, especially due to alcohol dehydrogenase locus. Natural selection hypothesis is discussed in explaining these findings.

  6. Flora of the city of Podgorica, Montenegro: Taxonomic analysis

    Directory of Open Access Journals (Sweden)

    Stešević Danijela

    2008-01-01

    Full Text Available In this paper we present the taxonomic segment of a floristic study undertaken in the city of Podgorica in the period of 2002-2007. The check-list of spontaneously growing vascular plants includes 1227 species and subspecies belonging to 545 genera and 118 families. The dominant families are Poaceae (11.7%, asteraceae (11.2% and Fabaceae (9.2%. The most abundant genera are Trifolium (2.1%, Euphorbia (1.5%, Carex (1.5%, Bromus (1.3% and Vicia (1.2%. Analysis of the flora of Podgorica in comparison with some other european cities showed that the flora of Podgorica is most similar to that of Rome (Q/S= 0,7.

  7. Camallanus tridentatus (Drasche) (Nematoda: Camallanidae): new taxonomically important morphological data.

    Science.gov (United States)

    Santos, Cláudia Portes; Moravec, Frantisek

    2009-02-01

    Camallanus tridentatus is redescribed on the basis of the examination of specimens obtained from the stomach, caeca and intestine of the naturally infected arapaima Arapaima gigas (Schinz) from the Mexiana Island, Amazon River Delta, Brazil. Data on the surface morphology of adults inferred from confocal laser scanning and scanning electron microscopical observations are also provided. The study revealed some taxonomically important, previously unreported morphological features in this species, such as the presence of the poorly sclerotized left spicule and deirids. C. tridentatus distinctly differs from other congeneric species parasitizing freshwater fishes in South America mainly in the structure of the buccal capsule and the female caudal end. C. maculatus Martins, Garcia, Piazza and Ghiraldelli is considered a junior synonymm of Camallanus cotti Fujita.

  8. Camallanus tridentatus (Drasche (Nematoda: Camallanidae: new taxonomically important morphological data

    Directory of Open Access Journals (Sweden)

    Cláudia Portes Santos

    2009-02-01

    Full Text Available Camallanus tridentatus is redescribed on the basis of the examination of specimens obtained from the stomach, caeca and intestine of the naturally infected arapaima Arapaima gigas (Schinz from the Mexiana Island, Amazon River Delta, Brazil. Data on the surface morphology of adults inferred from confocal laser scanning and scanning electron microscopical observations are also provided. The study revealed some taxonomically important, previously unreported morphological features in this species, such as the presence of the poorly sclerotized left spicule and deirids. C. tridentatus distinctly differs from other congeneric species parasitizing freshwater fishes in South America mainly in the structure of the buccal capsule and the female caudal end. C. maculatus Martins, Garcia, Piazza and Ghiraldelli is considered a junior synonymm of Camallanus cotti Fujita.

  9. Seed morphology and its taxonomic significance in the family malvaceae

    International Nuclear Information System (INIS)

    Abid, R.; Ather, A.

    2016-01-01

    The seed morphological studies of 75 taxa belonging to 6 sub-families of the family Malvaceae were carried out from Pakistan. In Pakistan the family Malvaceae is represented by 6 sub-families viz., Byttnerioideae, Dombeyoideae, Malvoideae, Bombacoideae, Helicteroideae and Sterculioideae. The seed macro and micro morphological characters are examined, using light (LM) and scanning electron microscopy (SEM). Detailed seed morphological descriptions, micrographs and keys based on seed characters are also provided. A variety in various quantitative and qualitative seed characters was observed. The micro-morphological characters of seeds are quite significant to strengthen the taxonomic decisions within the family Malvaceae at various levels. The data obtained from the seed morphological characters were analyzed numerically to trace out the phylogenetic affinities for the taxa within the family Malvaceae from Pakistan. (author)

  10. Fossil struthionid eggshells from Laetoli, Tanzania: Taxonomic and biostratigraphic significance

    Science.gov (United States)

    Harrison, Terry; Msuya, Charles P.

    2005-04-01

    Recent paleontological investigations at Laetoli and neighboring localities in northern Tanzania have produced a large collection of fossil ostrich eggshells from the Pliocene-aged Laetolil Beds (˜3.5-4.5 Ma) and Ndolanya Beds (˜2.6-2.7 Ma). A detailed analysis of the morphology of the eggshells and their taxonomic affinities indicates that two different species of Struthio are represented. In the Lower Laetolil Beds and in the Upper Laetolil Beds below Tuff 3 a new species is recognized— Struthio kakesiensis. This is replaced in the Upper Laetolil Beds by Struthio camelus, the modern species of ostrich. Since radiometric age determinations are available for the stratigraphic sequence at Laetoli, it is possible to precisely date the first appearance of S. camelus at ˜3.6-3.8 Ma. Comparisons of the Laetoli material with specimens from the well-dated sequences at Lothagam and Kanapoi in northern Kenya, allow the taxonomic and biochronological analysis to be extended back in time to the late Miocene. At about 6.5 Ma, Diamantornis and elephant birds were replaced in East Africa by ostriches belonging to the genus Struthio. Three time-successive species of ostriches are identified in the fossil record of East Africa, beginning with Struthio. cf. karingarabensis (˜6.5-4.2 Ma), followed by S. kakesiensis (˜4.5-3.6 Ma) and then S. camelus (˜3.8 Ma onwards). A similar sequence of taxa has previously been recorded from localities in Namibia, but at these sites there is no possibility to precisely calibrate the ages of the different species using radiometric dating. Nevertheless, the broadly similar evolutionary sequence and the close correspondence in inferred ages for the succession of species in East Africa and Namibia suggest that ostrich eggshells are a very useful tool for biochronological correlation of paleontological sites in sub-Saharan Africa.

  11. Taxonomic composition of phytoplankton in the Vakh River (Western Siberia)

    Science.gov (United States)

    Skorobogatova, O. N.

    2018-03-01

    This paper provides data on the hydrological and hydrochemical parameters of the Vakh River in the Middle Ob region. In 2005-2008 we have identified 404 taxonomic units represented by 463 species, types and forms of algae, belonging to 140 genera, 52 families, 13 classes and 7 divisions. 386 species were identified for the first time, 141 taxa were identified as rare and 22 taxa as new for Western Siberia. Leading divisions, Bacillariophyta and Chlorophyta, make up for 78.9% of total phytoplankton diversity. Cyanobacteria, Chrysophyta and Euglenophyta form a community of 88 taxonomic units having a rank lower than genus level, and represent 19.0% of the total number. The floral role of Xanthophyta and Dinophyta is insignificant (2.1%). The main structure-forming species are 14: vegetating throughout the year (Aulacoseira italica, Asterionella formosa), summer taxa (Microcystis aeruginosa, Melosira varians, Aulacoseira granulata, Pandorina morum, Pediastrum boryanum, P. duplex, Lacunastrum gracillimum, Scenedesmus quadricauda) and summer-autumn (Microcystis pulverea, Tabellaria fenestrata, T. flocculosa, Mucidosphaerium pulchellum). The Vakh River demonstrates specific characteristics of boreal flowing waterways. The northern composition is represented in a big rate of families (44.2%) and genera (109 77.9) with one to three species. The richest genera Closterium (31 taxa), Eunotia (27 taxa), Pinnularia (22 taxa), Desmidium (11 taxa) and the family Desmidiaceae (45 taxa) ensure diversity of phytoplankton. Ecological and geographical analysis demonstrates predominance of cosmopolitan algae (56.6%). Plankton represents 44.7% of all algae, oligogalobs - 78.8% and indifferent algae – 36.7%. Water meets the requirements for β-mezosaprobian pollution zone, class of satisfactory purity (III class).

  12. Extrafloral nectaries in Combretaceae: morphology, anatomy and taxonomic significance

    Directory of Open Access Journals (Sweden)

    P. M. Tilney

    2004-09-01

    Full Text Available Extrafloral nectaries (EFNs in members of the Combretaceae are nectaries not involved with pollination and occurring on vegetative structures; they are believed to attract ants to protect plants against herbivorv by other insects. In the Combretaceae EFNs are reported in species of Terminalia L. and Pteleopsis Engl., putative EFNs in Meiostemon Exell & Stace and Quisqualis L., and an absence of EFNs in Combretum Loefl. and Lumnitzera Willd. EFNs in the family are generally spherical in shape and may be raised, level with the surface or somewhat concave. They are similar in the Terminalia and  Pteleopsis species where they display varying degrees of internal zonation and are composed of small cells; those species observed in the field were all found to have functional EFNs. In Meiostemon tetrandrum (Exell Exell & Stace, Quisqualis indica L.. Q. littorea (Engl. Exell and Q. paviflora Gerrard ex Sond.. apparent EFNs lack internal zonation and are composed of enlarged cells; confirmation is required as to whether these are functional . The formation of EFNs appears to be highly flexible. They are usually essentially associated with new growth but their occurrence is sporadic and they do not appear on every leaf or every' branch of a plant. The distribution of EFNs on leaves, when present, is of taxonomic significance to separate species of Pteleopsis and Terminalia: otherwise the presence or absence and distribution of EFNs are too variable and sporadic in occurrence to be of taxonomic significance at the species level. Indiscriminate use of the terms gland and domatium instead of EFN. and possible confusion with damage caused by other organisms, has probably con­tributed to many of these structures not previously being recorded as EFNs. Floral and extrafloral nectar samples of T. phanerophlebia Engl. & Diels differed in sugar composition.

  13. Is Homo sapiens polytypic? Human taxonomic diversity and its implications.

    Science.gov (United States)

    Woodley, Michael A

    2010-01-01

    The term race is a traditional synonym for subspecies, however it is frequently asserted that Homo sapiens is monotypic and that what are termed races are nothing more than biological illusions. In this manuscript a case is made for the hypothesis that H. sapiens is polytypic, and in this way is no different from other species exhibiting similar levels of genetic and morphological diversity. First it is demonstrated that the four major definitions of race/subspecies can be shown to be synonymous within the context of the framework of race as a correlation structure of traits. Next the issue of taxonomic classification is considered where it is demonstrated that H. sapiens possesses high levels morphological diversity, genetic heterozygosity and differentiation (F(ST)) compared to many species that are acknowledged to be polytypic with respect to subspecies. Racial variation is then evaluated in light of the phylogenetic species concept, where it is suggested that the least inclusive monophyletic units exist below the level of species within H. sapiens indicating the existence of a number of potential human phylogenetic species; and the biological species concept, where it is determined that racial variation is too small to represent differentiation at the level of biological species. Finally the implications of this are discussed in the context of anthropology where an accurate picture of the sequence and timing of events during the evolution of human taxa are required for a complete picture of human evolution, and medicine, where a greater appreciation of the role played by human taxonomic differences in disease susceptibility and treatment responsiveness will save lives in the future.

  14. Silicon photonic integrated circuit swept-source optical coherence tomography receiver with dual polarization, dual balanced, in-phase and quadrature detection.

    Science.gov (United States)

    Wang, Zhao; Lee, Hsiang-Chieh; Vermeulen, Diedrik; Chen, Long; Nielsen, Torben; Park, Seo Yeon; Ghaemi, Allan; Swanson, Eric; Doerr, Chris; Fujimoto, James

    2015-07-01

    Optical coherence tomography (OCT) is a widely used three-dimensional (3D) optical imaging method with many biomedical and non-medical applications. Miniaturization, cost reduction, and increased functionality of OCT systems will be critical for future emerging clinical applications. We present a silicon photonic integrated circuit swept-source OCT (SS-OCT) coherent receiver with dual polarization, dual balanced, in-phase and quadrature (IQ) detection. We demonstrate multiple functional capabilities of IQ polarization resolved detection including: complex-conjugate suppressed full-range OCT, polarization diversity detection, and polarization-sensitive OCT. To our knowledge, this is the first demonstration of a silicon photonic integrated receiver for OCT. The integrated coherent receiver provides a miniaturized, low-cost solution for SS-OCT, and is also a key step towards a fully integrated high speed SS-OCT system with good performance and multi-functional capabilities. With further performance improvement and cost reduction, photonic integrated technology promises to greatly increase penetration of OCT systems in existing applications and enable new applications.

  15. Organic sources in the Egyptian seawater around Alexandria coastal area as integrated from polycyclic aromatic hydrocarbons (PAHs

    Directory of Open Access Journals (Sweden)

    Omayma E. Ahmed

    2017-09-01

    Full Text Available This paper represents the first comprehensive survey and provides important data on PAHs concentration and composition in Alexandria coastal seawater. The compositions of PAHs determined in all samples are to be used as chemical markers for identifying different sources of PAH pollution in the surface seawater of Alexandria coastal area. The quantitative analysis of PAHs showed a concentration ranging from 8970.939 to 1254756.00 ng/L, which exceeds the maximum admissible concentrations of PAHs (200 ng/L for the water standard of European Union. The calculated diagnostic ratios suggested that the sources of PAHs at the majority of the studied area are derived primarily from pyrogenic sources from incomplete fuel combustion of the boats and vehicle engines with lesser amounts of PAHs contributed from petrogenic sources. Some stations displayed mixed sources in comparison to many other studied marine systems, the PAH concentrations detected at Alexandria area were considered to be higher and pose health risks to aquatic bodies.

  16. A cost-efficient expansion of renewable energy sources in the European electricity system. An integrated modelling approach with a particular emphasis on diurnal and seasonal patterns

    Energy Technology Data Exchange (ETDEWEB)

    Golling, Christiane

    2012-11-01

    This thesis determines a cost-efficient expansion of electricity generated by renewable energy sources (RES-E) in the European power generation system. It is an integrated modelling approach with a particular emphasis on diurnal and seasonal patterns of renewable energy sources (RES). An integrated modelling approach optimizes the overall European electricity system while comprising fossil, nuclear, and renewable generation as well as storage capacities. The integrated model approach corresponds to a situation in which renewable generation is subject to electricity price signals. In sensitivity scenarios cases of the integrated model approach are compared to situations in which renewable generation is granted priority feed-in and is decoupled from electricity price signals. In addition, the role of different flexibility options, which can be provided by storage capacities and grid expansion are scrutinized. The methodology of the thesis consists of two parts. First, it develops an integrative model approach by extending an existing European electricity model only comprising conventional power generating technologies. Second, an appropriate representation of intermittent RES for electricity market models is established by the determination of corresponding typedays. The typeday modelling takes the spatial correlation of RES and the correlation between wind and solar power into account. Moreover, the typeday modelling captures average dispatch-relevant, diurnal and seasonal RES characteristics such as the level, the variance, and the gradient. The scenario analysis shows that separate developments of renewable and conventional technologies imply several inefficiencies. These increase with higher RES-E penetration. Inefficiencies such as an increased wind power curtailment, an augmented capital turnover, or a higher cumulative installed power generating capacity are revealed and quantified.

  17. Development of the integrated control system for the microwave ion source of the PEFP 100-MeV proton accelerator

    Science.gov (United States)

    Song, Young-Gi; Seol, Kyung-Tae; Jang, Ji-Ho; Kwon, Hyeok-Jung; Cho, Yong-Sub

    2012-07-01

    The Proton Engineering Frontier Project (PEFP) 20-MeV proton linear accelerator is currently operating at the Korea Atomic Energy Research Institute (KAERI). The ion source of the 100-MeV proton linac needs at least a 100-hour operation time. To meet the goal, we have developed a microwave ion source that uses no filament. For the ion source, a remote control system has been developed by using experimental physics and the industrial control system (EPICS) software framework. The control system consists of a versa module europa (VME) and EPICS-based embedded applications running on a VxWorks real-time operating system. The main purpose of the control system is to control and monitor the operational variables of the components remotely and to protect operators from radiation exposure and the components from critical problems during beam extraction. We successfully performed the operation test of the control system to confirm the degree of safety during the hardware performance.

  18. Open Source ERP Applications: A Reality Check for Their Possible Adoption and Use in Teaching Business Process Integration

    Science.gov (United States)

    Huynh, Minh; Pinto, Ivan

    2010-01-01

    For years, there has been a need for teaching students about business process integration. The use of ERP systems has been proposed as a mechanism to meet this need. Yet, in the midst of a recent economic crisis, it is difficult to find funding for the acquisition and implementation of an ERP system for teaching purpose. While it is recognized…

  19. Taxonomic history and invasion biology of two Phyllonorycter leaf miners (Lepidoptera: Gracillariidae) with links to taxonomic and molecular datasets.

    Science.gov (United States)

    De Prins, Jurate; De Prins, Willy; De Coninck, Eliane; Kawahara, Akito Y; Milton, Megan A; Hebert, Paul D N

    2013-01-01

    This paper deals with two European species, Phyllonorycter mespilella (Hübner, 1805) and P. trifasciella (Haworth, 1828), that have colonized the subtropical Canary Islands. The Rosaceae leaf miner, P. mespilella, is recorded for the first time from Lanzarote and La Palma, while the Caprifoliaceae leaf miner, P. trifasciella, is recorded from Tenerife. We present the diagnoses of these species based on morphology, a preliminary DNA barcode (COI) library of congeneric and con-familial species, and discuss the taxonomic position of the colonizers within the blancardella and trifasciella species groups. The recent intensification of anthropogenic disturbance likely accounts for their range expansion, an event that may impact the relict flora present on the Canary Islands.

  20. Low-loss integrated electrical surface plasmon source with ultra-smooth metal film fabricated by polymethyl methacrylate ‘bond and peel’ method

    Science.gov (United States)

    Liu, Wenjie; Hu, Xiaolong; Zou, Qiushun; Wu, Shaoying; Jin, Chongjun

    2018-06-01

    External light sources are mostly employed to functionalize the plasmonic components, resulting in a bulky footprint. Electrically driven integrated plasmonic devices, combining ultra-compact critical feature sizes with extremely high transmission speeds and low power consumption, can link plasmonics with the present-day electronic world. In an effort to achieve this prospect, suppressing the losses in the plasmonic devices becomes a pressing issue. In this work, we developed a novel polymethyl methacrylate ‘bond and peel’ method to fabricate metal films with sub-nanometer smooth surfaces on semiconductor wafers. Based on this method, we further fabricated a compact plasmonic source containing a metal-insulator-metal (MIM) waveguide with an ultra-smooth metal surface on a GaAs-based light-emitting diode wafer. An increase in propagation length of the SPP mode by a factor of 2.95 was achieved as compared with the conventional device containing a relatively rough metal surface. Numerical calculations further confirmed that the propagation length is comparable to the theoretical prediction on the MIM waveguide with perfectly smooth metal surfaces. This method facilitates low-loss and high-integration of electrically driven plasmonic devices, thus provides an immediate opportunity for the practical application of on-chip integrated plasmonic circuits.

  1. NODC Standard Product: NODC Taxonomic Code on CD-ROM (NODC Accession 0050418)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The content of the NODC Taxonomic Code, Version 8 CD-ROM (CD-ROM NODC-68) distributed by NODC is archived in this accession. Version 7 of the NODC Taxonomic Code...

  2. Taxonomic status of the roses (Rosa) described by S.G. Dimitrov from Bulgaria

    DEFF Research Database (Denmark)

    Zielinski, J.; Petrova, A; Tan, Kit

    2004-01-01

    The original herbarium vouchers for six species of Rosa (Rosaceae) described by S. G. Dimitrov from Bulgaria are taxonomically evaluated. Two species (R. balcanica, R. orphei) are considered hybrids, four other names (R. bulgarica, R. parilica, R. pontica and R. rhodopaea) are taxonomic synonyms...

  3. Taxonomic significance of cypsela morphology for the tribe mutisieae (s.l.) (asteraceae) from Pakistan

    International Nuclear Information System (INIS)

    Abid, R.; Alam, J.

    2011-01-01

    Cypselas of 5 species distributed in 3 genera of the tribe Mutisieae (s.l.) were examined from Pakistan to assess their taxonomic significance. Micro morphological characters of cypsela including shape, pappus and carpopodium have been proved very rewarding to evaluate the taxonomic decisions both at the generic and specific levels. (author)

  4. Risk assessment of water pollution sources based on an integrated k-means clustering and set pair analysis method in the region of Shiyan, China.

    Science.gov (United States)

    Li, Chunhui; Sun, Lian; Jia, Junxiang; Cai, Yanpeng; Wang, Xuan

    2016-07-01

    Source water areas are facing many potential water pollution risks. Risk assessment is an effective method to evaluate such risks. In this paper an integrated model based on k-means clustering analysis and set pair analysis was established aiming at evaluating the risks associated with water pollution in source water areas, in which the weights of indicators were determined through the entropy weight method. Then the proposed model was applied to assess water pollution risks in the region of Shiyan in which China's key source water area Danjiangkou Reservoir for the water source of the middle route of South-to-North Water Diversion Project is located. The results showed that eleven sources with relative high risk value were identified. At the regional scale, Shiyan City and Danjiangkou City would have a high risk value in term of the industrial discharge. Comparatively, Danjiangkou City and Yunxian County would have a high risk value in terms of agricultural pollution. Overall, the risk values of north regions close to the main stream and reservoir of the region of Shiyan were higher than that in the south. The results of risk level indicated that five sources were in lower risk level (i.e., level II), two in moderate risk level (i.e., level III), one in higher risk level (i.e., level IV) and three in highest risk level (i.e., level V). Also risks of industrial discharge are higher than that of the agricultural sector. It is thus essential to manage the pillar industry of the region of Shiyan and certain agricultural companies in the vicinity of the reservoir to reduce water pollution risks of source water areas. Copyright © 2016 Elsevier B.V. All rights reserved.

  5. Lippmann-Schwinger integral equation approach to the emission of radiation by sources located inside finite-sized dielectric structures

    DEFF Research Database (Denmark)

    Søndergaard, T.; Tromborg, Bjarne

    2002-01-01

    uses for analyzing the emission of light by sources in some antennas and optical components such as vertical cavity surface emitting lasers, microdisk lasers, and light emitting diodes. The methods also have prospective uses in quantum electrodynamics for studies of spontaneous emission from, e...

  6. Undersøgelse af mulighederne for anvendelse af open source Integrated Library Systems (ILS) i universitetsbiblioteket

    DEFF Research Database (Denmark)

    Greve, Eli; Bøgh Pedersen, Kasper

    Dette projekt har til formål, at to biblioteker med meget forskellige profiler gennemfører test af konkrete open source baserede ILS systemer, formidler resultaterne til FFU-bibliotekerne og deres interessenter, og herved bidrager til en nuancering af beslutningsprocesserne i de kommende år omkring...

  7. Phosphorus diffusion with the help of the solid planar source in the manufacturing of the integrated circuits

    Directory of Open Access Journals (Sweden)

    B. A. Shangereeva

    2008-02-01

    Full Text Available The results of the development and realization of the basic process of the phosphorus diffusion for the formation of the active region of the power silicon transistor have been considered. It is shown that the obtained optimum technological conditions of the phosphorus diffusion using solid planar source allow to get the transistors with improved electrophysical parameters.

  8. Niche differentiation in nitrogen metabolism among methanotrophs within an operational taxonomic unit.

    Science.gov (United States)

    Hoefman, Sven; van der Ha, David; Boon, Nico; Vandamme, Peter; De Vos, Paul; Heylen, Kim

    2014-04-04

    The currently accepted thesis on nitrogenous fertilizer additions on methane oxidation activity assumes niche partitioning among methanotrophic species, with activity responses to changes in nitrogen content being dependent on the in situ methanotrophic community structure Unfortunately, widely applied tools for microbial community assessment only have a limited phylogenetic resolution mostly restricted to genus level diversity, and not to species level as often mistakenly assumed. As a consequence, intragenus or intraspecies metabolic versatility in nitrogen metabolism was never evaluated nor considered among methanotrophic bacteria as a source of differential responses of methane oxidation to nitrogen amendments. We demonstrated that fourteen genotypically different Methylomonas strains, thus distinct below the level at which most techniques assign operational taxonomic units (OTU), show a versatile physiology in their nitrogen metabolism. Differential responses, even among strains with identical 16S rRNA or pmoA gene sequences, were observed for production of nitrite and nitrous oxide from nitrate or ammonium, nitrogen fixation and tolerance to high levels of ammonium, nitrate, and hydroxylamine. Overall, reduction of nitrate to nitrite, nitrogen fixation, higher tolerance to ammonium than nitrate and tolerance and assimilation of nitrite were general features. Differential responses among closely related methanotrophic strains to overcome inhibition and toxicity from high nitrogen loads and assimilation of various nitrogen sources yield competitive fitness advantages to individual methane-oxidizing bacteria. Our observations proved that community structure at the deepest phylogenetic resolution potentially influences in situ functioning.

  9. Open source tools for management and archiving of digital microscopy data to allow integration with patient pathology and treatment information.

    Science.gov (United States)

    Khushi, Matloob; Edwards, Georgina; de Marcos, Diego Alonso; Carpenter, Jane E; Graham, J Dinny; Clarke, Christine L

    2013-02-12

    Virtual microscopy includes digitisation of histology slides and the use of computer technologies for complex investigation of diseases such as cancer. However, automated image analysis, or website publishing of such digital images, is hampered by their large file sizes. We have developed two Java based open source tools: Snapshot Creator and NDPI-Splitter. Snapshot Creator converts a portion of a large digital slide into a desired quality JPEG image. The image is linked to the patient's clinical and treatment information in a customised open source cancer data management software (Caisis) in use at the Australian Breast Cancer Tissue Bank (ABCTB) and then published on the ABCTB website (http://www.abctb.org.au) using Deep Zoom open source technology. Using the ABCTB online search engine, digital images can be searched by defining various criteria such as cancer type, or biomarkers expressed. NDPI-Splitter splits a large image file into smaller sections of TIFF images so that they can be easily analysed by image analysis software such as Metamorph or Matlab. NDPI-Splitter also has the capacity to filter out empty images. Snapshot Creator and NDPI-Splitter are novel open source Java tools. They convert digital slides into files of smaller size for further processing. In conjunction with other open source tools such as Deep Zoom and Caisis, this suite of tools is used for the management and archiving of digital microscopy images, enabling digitised images to be explored and zoomed online. Our online image repository also has the capacity to be used as a teaching resource. These tools also enable large files to be sectioned for image analysis. The virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/5330903258483934.

  10. Open source tools for management and archiving of digital microscopy data to allow integration with patient pathology and treatment information

    Directory of Open Access Journals (Sweden)

    Khushi Matloob

    2013-02-01

    Full Text Available Abstract Background Virtual microscopy includes digitisation of histology slides and the use of computer technologies for complex investigation of diseases such as cancer. However, automated image analysis, or website publishing of such digital images, is hampered by their large file sizes. Results We have developed two Java based open source tools: Snapshot Creator and NDPI-Splitter. Snapshot Creator converts a portion of a large digital slide into a desired quality JPEG image. The image is linked to the patient’s clinical and treatment information in a customised open source cancer data management software (Caisis in use at the Australian Breast Cancer Tissue Bank (ABCTB and then published on the ABCTB website (http://www.abctb.org.au using Deep Zoom open source technology. Using the ABCTB online search engine, digital images can be searched by defining various criteria such as cancer type, or biomarkers expressed. NDPI-Splitter splits a large image file into smaller sections of TIFF images so that they can be easily analysed by image analysis software such as Metamorph or Matlab. NDPI-Splitter also has the capacity to filter out empty images. Conclusions Snapshot Creator and NDPI-Splitter are novel open source Java tools. They convert digital slides into files of smaller size for further processing. In conjunction with other open source tools such as Deep Zoom and Caisis, this suite of tools is used for the management and archiving of digital microscopy images, enabling digitised images to be explored and zoomed online. Our online image repository also has the capacity to be used as a teaching resource. These tools also enable large files to be sectioned for image analysis. Virtual Slides The virtual slide(s for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/5330903258483934

  11. dena grid study II. Integration of renewable energy sources into the German power supply system until 2020; dena - Netzstudie II. Integration erneuerbarer Energien in die deutsche Stromversorgung bis 2020

    Energy Technology Data Exchange (ETDEWEB)

    Agricola, Annegret C.; Seidl, Hannes; Zoch, Immo (comps.)

    2010-12-15

    With its broad system approach, dena Grid Study II describes new ways of developing Germany's integrated grid with regard to the expansion of renewable energy sources and taking not only an economically optimised conventional power generation system but also European power trading into account. Basis for detailed grid planning. Having investigated many different transmission technologies, grid management measures and options for increasing flexibility on both the supply and demand side, the study does much more than simply identify grid expansion requirements, it shows the path towards overall optimisation of the energy supply system. In addition to robustly identifying grid expansion requirements, dena Grid Study II provides a very sound basis for further detailed grid planning and the identification of specific power routes in the German power transmission grid. Increasing grid expansion requirements. dena Grid Study II investigates the expansion of electricity generation from renewable energy sources to 39 percent by 2020. However, this is just an interim goal. By as soon as 2030, the German Federal Government is planning to raise the proportion of renewable electricity generation to 50 percent. This shows that even after 2020, further adaptation of grid infrastructure will still be necessary. Practical action required. If the grid expansion required to integrate renewable energy sources is to be achieved rapidly, there is an urgent need to back up the grid expansion scenarios presented in dena Grid Study II with practical action. (orig.)

  12. Integrated Path Detection of Co2 and CH4 Using a Waveform Driven Electro-Optic Single Sideband Laser Source

    Directory of Open Access Journals (Sweden)

    Wagner Gerd

    2016-01-01

    Full Text Available Integrated path concentrations of ambient levels of carbon dioxide and methane have been measured during nighttime periods at NIST, Boulder (CO, USA, using a ground-based, eyesafe laser system. In this contribution, we describe the transmitter and receiver system, demonstrate measurements of CO2 and CH4 in comparison with an in situ point sensor measurement using a commercial cavity ring-down instrument, and demonstrate a speckle noise reduction method.

  13. Life cycle assessment of seaweed biomethane, generated from seaweed sourced from integrated multi-trophic aquaculture in temperate oceanic climates

    OpenAIRE

    CZYRNEK-DELETRE MAGDALENA; ROCCA STEFANIA; AGOSTINI ALESSANDRO; GIUNTOLI JACOPO; MURPHY JERRY

    2017-01-01

    Biomethane produced from seaweed is a third generation renewable gaseous fuel. The advantage of seaweed for biofuel is that it does not compete directly or indirectly for land with food, feed or fibre production. Furthermore, the integration of seaweed and salmon farming can increase the yield of seaweed per hectare, while reducing the eutrophication from fish farming. So far, full comprehensive life cycle assessment (LCA) studies of seaweed biofuel are scarce in the literature; current studi...

  14. Integrative Genomics: Quantifying significance of phenotype-genotype relationships from multiple sources of high-throughput data

    Directory of Open Access Journals (Sweden)

    Eric eGamazon

    2013-05-01

    Full Text Available Given recent advances in the generation of high-throughput data such as whole genome genetic variation and transcriptome expression, it is critical to come up with novel methods to integrate these heterogeneous datasets and to assess the significance of identified phenotype-genotype relationships. Recent studies show that genome-wide association findings are likely to fall in loci with gene regulatory effects such as expression quantitative trait loci (eQTLs, demonstrating the utility of such integrative approaches. When genotype and gene expression data are available on the same individuals, we developed methods wherein top phenotype-associated genetic variants are prioritized if they are associated, as eQTLs, with gene expression traits that are themselves associated with the phenotype. Yet there has been no method to determine an overall p-value for the findings that arise specifically from the integrative nature of the approach. We propose a computationally feasible permutation method that accounts for the assimilative nature of the method and the correlation structure among gene expression traits and among genotypes. We apply the method to data from a study of cellular sensitivity to etoposide, one of the most widely used chemotherapeutic drugs. To our knowledge, this study is the first statistically sound quantification of the significance of the genotype-phenotype relationships resulting from applying an integrative approach. This method can be easily extended to cases in which gene expression data are replaced by other molecular phenotypes of interest, e.g., microRNA or proteomic data. This study has important implications for studies seeking to expand on genetic association studies by the use of omics data. Finally, we provide an R code to compute the empirical FDR when p-values for the observed and simulated phenotypes are available.

  15. Multifrequency sources of quantum correlated photon pairs on-chip: a path toward integrated Quantum Frequency Combs

    Directory of Open Access Journals (Sweden)

    Caspani Lucia

    2016-06-01

    Full Text Available Recent developments in quantum photonics have initiated the process of bringing photonic-quantumbased systems out-of-the-lab and into real-world applications. As an example, devices to enable the exchange of a cryptographic key secured by the laws of quantum mechanics are already commercially available. In order to further boost this process, the next step is to transfer the results achieved by means of bulky and expensive setups into miniaturized and affordable devices. Integrated quantum photonics is exactly addressing this issue. In this paper, we briefly review the most recent advancements in the generation of quantum states of light on-chip. In particular, we focus on optical microcavities, as they can offer a solution to the problem of low efficiency that is characteristic of the materials typically used in integrated platforms. In addition, we show that specifically designed microcavities can also offer further advantages, such as compatibility with telecom standards (for exploiting existing fibre networks and quantum memories (necessary to extend the communication distance, as well as giving a longitudinal multimode character for larger information transfer and processing. This last property (i.e., the increased dimensionality of the photon quantum state is achieved through the ability to generate multiple photon pairs on a frequency comb, corresponding to the microcavity resonances. Further achievements include the possibility of fully exploiting the polarization degree of freedom, even for integrated devices. These results pave the way for the generation of integrated quantum frequency combs that, in turn, may find important applications toward the realization of a compact quantum-computing platform.

  16. Nitrogen Source Inventory and Loading Tool: An integrated approach toward restoration of water-quality impaired karst springs.

    Science.gov (United States)

    Eller, Kirstin T; Katz, Brian G

    2017-07-01

    Nitrogen (N) from anthropogenic sources has contaminated groundwater used as drinking water in addition to impairing water quality and ecosystem health of karst springs. The Nitrogen Source Inventory and Loading Tool (NSILT) was developed as an ArcGIS and spreadsheet-based approach that provides spatial estimates of current nitrogen (N) inputs to the land surface and loads to groundwater from nonpoint and point sources within the groundwater contributing area. The NSILT involves a three-step approach where local and regional land use practices and N sources are evaluated to: (1) estimate N input to the land surface, (2) quantify subsurface environmental attenuation, and (3) assess regional recharge to the aquifer. NSILT was used to assess nitrogen loading to groundwater in two karst spring areas in west-central Florida: Rainbow Springs (RS) and Kings Bay (KB). The karstic Upper Floridan aquifer (UFA) is the source of water discharging to the springs in both areas. In the KB study area (predominantly urban land use), septic systems and urban fertilizers contribute 48% and 22%, respectively, of the estimated total annual N load to groundwater 294,400 kg-N/yr. In contrast for the RS study area (predominantly agricultural land use), livestock operations and crop fertilizers contribute 50% and 13%, respectively, of the estimated N load to groundwater. Using overall groundwater N loading rates for the KB and RS study areas, 4.4 and 3.3 kg N/ha, respectively, and spatial recharge rates, the calculated groundwater nitrate-N concentration (2.1 mg/L) agreed closely with the median nitrate-N concentration (1.7 mg/L) from groundwater samples in agricultural land use areas in the RS study area for the period 2010-2014. NSILT results provide critical information for prioritizing and designing restoration efforts for water-quality impaired springs and spring runs affected by multiple sources of nitrogen loading to groundwater. The calculated groundwater N concentration for

  17. InP-DHBT-on-BiCMOS technology with fT/fmax of 400/350 GHz for heterogeneous integrated millimeter-wave sources

    DEFF Research Database (Denmark)

    Kraemer, Tomas; Ostermay, Ina; Jensen, Thomas

    2013-01-01

    -100 GHz. The 0.8 × 5 μm2 InP DHBTs show fT/fmax of 400/350 GHz with an output power of more than 26 mW at 96 GHz. These are record values for a heterogeneously integrated transistor on silicon. As a circuit example, a 164-GHz signal source is presented. It features a voltage-controlled oscillator in Bi......This paper presents a novel InP-SiGe BiCMOS technology using wafer-scale heterogeneous integration. The vertical stacking of the InP double heterojunction bipolar transistor (DHBT) circuitry directly on top of the BiCMOS wafer enables ultra-broadband interconnects with

  18. Electric Vehicles Integration in the Electric Power System with Intermittent Energy Sources - The Charge/Discharge infrastructure

    DEFF Research Database (Denmark)

    Marra, Francesco

    The replacement of conventional fuelled vehicles with electric vehicles (EVs) is going to increase in the coming years, following the trend seen for renewable energy sources (RES), as photovoltaic (PV) and wind power. In this scenario, the electric power systems in Europe are going to accommodate...... increased levels of non-dispatchable and fluctuating energy sources, as well as additional power demand due to EV charging. If the charging of EVs can be intelligently managed, several advantages can be offered to the power system. How useful coordinated EV charging can be, in combination with RES...... and the power levels needed. Furthermore, during EV coordination, a number of nonlinearities and battery ageing issues should be taken into account, to ensure a correct EV coordination and to preserve the EV battery lifetime. The third part of this research exploits the use of EV load coordination as an energy...

  19. Optimal integration of a hybrid solar-battery power source into smart home nanogrid with plug-in electric vehicle

    OpenAIRE

    Wu, Xiaohua; Hu, Xiaosong; Teng, Yanqiong; Qian, Shide; Cheng, Rui

    2017-01-01

    Hybrid solar-battery power source is essential in the nexus of plug-in electric vehicle (PEV), renewables, and smart building. This paper devises an optimization framework for efficient energy management and components sizing of a single smart home with home battery, PEV, and potovoltatic (PV) arrays. We seek to maximize the home economy, while satisfying home power demand and PEV driving. Based on the structure and system models of the smart home nanogrid, a convex programming (CP) problem i...

  20. A multi-layer based architecture for the development of an open source CAD/CAM integration virtual platform

    OpenAIRE

    Aguinaga, Álvaro; Ávila, Carlos; Cando, Edgar

    2014-01-01

    Este artículo propone una arquitectura n-capas, con un "front-end", para el desarrollo de una plataforma virtual de simulación de procesos en máquinas herramientas CNC. Esta plataforma "Open sources" incluye un CAD/CAM (Torno-Fresa) con una interface de dibujos primitivos que proporciona una programación que puede ser simulado en una pantalla touch-Screen".

  1. Source identification of heavy metals in peri-urban agricultural soils of southeast China: An integrated approach.

    Science.gov (United States)

    Hu, Wenyou; Wang, Huifeng; Dong, Lurui; Huang, Biao; Borggaard, Ole K; Bruun Hansen, Hans Christian; He, Yue; Holm, Peter E

    2018-06-01

    Intensive human activities, in particular agricultural and industrial production have led to heavy metal accumulation in the peri-urban agricultural soils of China threatening soil environmental quality and agricultural product security. A combination of spatial analysis (SA), Pb isotope ratio analysis (IRA), input fluxes analysis (IFA), and positive matrix factorization (PMF) model was successfully used to assess the status and sources of heavy metals in typical peri-urban agricultural soils from a rapidly developing region of China. Mean concentrations of Cd, As, Hg, Pb, Cu, Zn and Cr in surface soils (0-20 cm) were 0.31, 11.2, 0.08, 35.6, 44.8, 119.0 and 97.0 mg kg -1 , respectively, exceeding the local background levels except for Hg. Spatial distribution of heavy metals revealed that agricultural activities have significant influence on heavy metal accumulation in the surface soils. Isotope ratio analysis suggested that fertilization along with atmospheric deposition were the major sources of heavy metal accumulation in the soils. Based on the PMF model, the relative contribution rates of the heavy metals due to fertilizer application, atmospheric deposition, industrial emission, and soil parent materials were 30.8%, 33.0%, 25.4% and 10.8%, respectively, demonstrating that anthropogenic activities had significantly higher contribution than natural sources. This study provides a reliable and robust approach for heavy metals source apportionment in this particular peri-urban area with a clear potential for future application in other regions. Copyright © 2018 Elsevier Ltd. All rights reserved.

  2. Cost benefit indicators associated with the integration of alternative energy sources: A systems approach for Carinthia, Austria

    DEFF Research Database (Denmark)

    Wohlgemuth, N.

    1999-01-01

    Studies on how to promote the use of alternative energy sources (AES) typically focus on the relative efficiency and effectiveness of alternative subsidising mechanisms. Positive externalities of an increased AES utilisation are in general not explicitly taken into account. This paper analyses...... of AES use. Analysis of two strategies, "Subsidy" and "High Tax", shows that none of these strategies is dominant with respect to all indicators, i.e., there are conflicting objectives. (C) 1998 Elsevier Science Ltd. All rights reserved....

  3. Hawaii Integrated Energy Assessment. Volume V. Rules, regulations, permits and policies affecting the development of alternate energy sources in Hawaii

    Energy Technology Data Exchange (ETDEWEB)

    1980-01-01

    A comprehensive presentaton of the major permits, regulations, rules, and controls which are likely to affect the development of alternate energy sources in Hawaii is presented. An overview of the permit process, showing the major categories and types of permits and controls for energy alternatives is presented. This is followed by a brief resume of current and projected changes designed to streamline the permit process. The permits, laws, regulations, and controls that are applicable to the development of energy alternatives in Hawaii are described. The alternate energy technologies affected, a description of the permit or control, and the requirements for conformance are presented for each applicable permit. Federal, state, and county permits and controls are covered. The individual energy technologies being considered as alternatives to the State's present dependence on imported fossil fuels are emphasized. The alternate energy sources covered are bioconversion, geothermal, ocean thermal, wind, solar (direct), and solid waste. For each energy alternative, the significant permits are summarized with a brief explanation of why they may be necessary. The framework of policy development at each of the levels of government with respect to the alternate energy sources is covered.

  4. Performance of Generating Plant: Managing the Changes. Supporting paper: The evolution of the electricity sector and renewable sources in Italy: opportunities and problems for wind power integration

    Energy Technology Data Exchange (ETDEWEB)

    Salvaderi, Luigi [IEEE Fellow (Italy)

    2008-05-15

    The WEC Committee on the Performance of Generating Plant (PGP) has been collecting and analysing power plant performance statistics worldwide for more than 30 years and has produced regular reports, which include examples of advanced techniques and methods for improving power plant performance through benchmarking. A series of reports from the various working groups was issued in 2008. This document serves as a supporting paper. Sections include: features of Italian energy and electricity; the evolution of liberalisation; support mechanism for renewables; connection to wind farm transmission network; wind source integration into power system; and, final comments.

  5. A Comparison and Integration of MiSeq and MinION Platforms for Sequencing Single Source and Mixed Mitochondrial Genomes.

    Directory of Open Access Journals (Sweden)

    Michael R Lindberg

    Full Text Available Single source and multiple donor (mixed samples of human mitochondrial DNA were analyzed and compared using the MinION and the MiSeq platforms. A generalized variant detection strategy was employed to provide a cursory framework for evaluating the reliability and accuracy of mitochondrial sequences produced by the MinION. The feasibility of long-read phasing was investigated to establish its efficacy in quantitatively distinguishing and deconvolving individuals in a mixture. Finally, a proof-of-concept was demonstrated by integrating both platforms in a hybrid assembly that leverages solely mixture data to accurately reconstruct full mitochondrial genomes.

  6. Schwinger's quantum action principle from Dirac’s formulation through Feynman’s path integrals, the Schwinger-Keldysh method, quantum field theory, to source theory

    CERN Document Server

    Milton, Kimball A

    2015-01-01

    Starting from the earlier notions of stationary action principles, these tutorial notes shows how Schwinger’s Quantum Action Principle descended from Dirac’s formulation, which independently led Feynman to his path-integral formulation of quantum mechanics. Part I brings out in more detail the connection between the two formulations, and applications are discussed. Then, the Keldysh-Schwinger time-cycle method of extracting matrix elements is described. Part II will discuss the variational formulation of quantum electrodynamics and the development of source theory.

  7. Bamboo tea: reduction of taxonomic complexity and application of DNA diagnostics based on rbcL and matK sequence data

    Science.gov (United States)

    Häser, Annette

    2016-01-01

    Background Names used in ingredient lists of food products are trivial and in their nature rarely precise. The most recent scientific interpretation of the term bamboo (Bambusoideae, Poaceae) comprises over 1,600 distinct species. In the European Union only few of these exotic species are well known sources for food ingredients (i.e., bamboo sprouts) and are thus not considered novel foods, which would require safety assessments before marketing of corresponding products. In contrast, the use of bamboo leaves and their taxonomic origin is mostly unclear. However, products containing bamboo leaves are currently marketed. Methods We analysed bamboo species and tea products containing bamboo leaves using anatomical leaf characters and DNA sequence data. To reduce taxonomic complexity associated with the term bamboo, we used a phylogenetic framework to trace the origin of DNA from commercially available bamboo leaves within the bambusoid subfamily. For authentication purposes, we introduced a simple PCR based test distinguishing genuine bamboo from other leaf components and assessed the diagnostic potential of rbcL and matK to resolve taxonomic entities within the bamboo subfamily and tribes. Results Based on anatomical and DNA data we were able to trace the taxonomic origin of bamboo leaves used in products to the genera Phyllostachys and Pseudosasa from the temperate “woody” bamboo tribe (Arundinarieae). Currently available rbcL and matK sequence data allow the character based diagnosis of 80% of represented bamboo genera. We detected adulteration by carnation in four of eight tea products and, after adapting our objectives, could trace the taxonomic origin of the adulterant to Dianthus chinensis (Caryophyllaceae), a well known traditional Chinese medicine with counter indications for pregnant women. PMID:27957401

  8. Fuzzy Decision-Making Fuser (FDMF for Integrating Human-Machine Autonomous (HMA Systems with Adaptive Evidence Sources

    Directory of Open Access Journals (Sweden)

    Yu-Ting Liu

    2017-06-01

    Full Text Available A brain-computer interface (BCI creates a direct communication pathway between the human brain and an external device or system. In contrast to patient-oriented BCIs, which are intended to restore inoperative or malfunctioning aspects of the nervous system, a growing number of BCI studies focus on designing auxiliary systems that are intended for everyday use. The goal of building these BCIs is to provide capabilities that augment existing intact physical and mental capabilities. However, a key challenge to BCI research is human variability; factors such as fatigue, inattention, and stress vary both across different individuals and for the same individual over time. If these issues are addressed, autonomous systems may provide additional benefits that enhance system performance and prevent problems introduced by individual human variability. This study proposes a human-machine autonomous (HMA system that simultaneously aggregates human and machine knowledge to recognize targets in a rapid serial visual presentation (RSVP task. The HMA focuses on integrating an RSVP BCI with computer vision techniques in an image-labeling domain. A fuzzy decision-making fuser (FDMF is then applied in the HMA system to provide a natural adaptive framework for evidence-based inference by incorporating an integrated summary of the available evidence (i.e., human and machine decisions and associated uncertainty. Consequently, the HMA system dynamically aggregates decisions involving uncertainties from both human and autonomous agents. The collaborative decisions made by an HMA system can achieve and maintain superior performance more efficiently than either the human or autonomous agents can achieve independently. The experimental results shown in this study suggest that the proposed HMA system with the FDMF can effectively fuse decisions from human brain activities and the computer vision techniques to improve overall performance on the RSVP recognition task. This

  9. Fuzzy Decision-Making Fuser (FDMF) for Integrating Human-Machine Autonomous (HMA) Systems with Adaptive Evidence Sources.

    Science.gov (United States)

    Liu, Yu-Ting; Pal, Nikhil R; Marathe, Amar R; Wang, Yu-Kai; Lin, Chin-Teng

    2017-01-01

    A brain-computer interface (BCI) creates a direct communication pathway between the human brain and an external device or system. In contrast to patient-oriented BCIs, which are intended to restore inoperative or malfunctioning aspects of the nervous system, a growing number of BCI studies focus on designing auxiliary systems that are intended for everyday use. The goal of building these BCIs is to provide capabilities that augment existing intact physical and mental capabilities. However, a key challenge to BCI research is human variability; factors such as fatigue, inattention, and stress vary both across different individuals and for the same individual over time. If these issues are addressed, autonomous systems may provide additional benefits that enhance system performance and prevent problems introduced by individual human variability. This study proposes a human-machine autonomous (HMA) system that simultaneously aggregates human and machine knowledge to recognize targets in a rapid serial visual presentation (RSVP) task. The HMA focuses on integrating an RSVP BCI with computer vision techniques in an image-labeling domain. A fuzzy decision-making fuser (FDMF) is then applied in the HMA system to provide a natural adaptive framework for evidence-based inference by incorporating an integrated summary of the available evidence (i.e., human and machine decisions) and associated uncertainty. Consequently, the HMA system dynamically aggregates decisions involving uncertainties from both human and autonomous agents. The collaborative decisions made by an HMA system can achieve and maintain superior performance more efficiently than either the human or autonomous agents can achieve independently. The experimental results shown in this study suggest that the proposed HMA system with the FDMF can effectively fuse decisions from human brain activities and the computer vision techniques to improve overall performance on the RSVP recognition task. This conclusion

  10. Energy storage system in medium-sized voltage lines for the integration of decentralized fluctuating energy sources; Energiespeicher im Niederspannungsnetz zur Integration dezentraler, fluktuierender Energiequellen

    Energy Technology Data Exchange (ETDEWEB)

    Bodach, M.

    2006-06-30

    network to minimize the sudden short-term power fluctuations. Further interesting applications of the intelligent storage system are based on its integration into energy management systems. (orig./GL)

  11. The epidermis in Passerina/ (Thymelaeaceae: structure, function and taxonomic significance

    Directory of Open Access Journals (Sweden)

    C. L. Bredenkamp

    2000-02-01

    Full Text Available Epidermal features were studied in all 17 species of Passerina, a genus endemic to southern Africa. Leaves in Passerina are inversely ericoid, the adaxial surface concave and the abaxial surface convex. Leaves are inversely dorsiventral and epistomatic. The adaxial epidermis is villous, with unicellular, uniseriate trichomes and relatively small thin-walled cells, promoting flexibility of leaf margins owing to turgor changes. In common with many other Thymelaeaceae, abaxial epidermal cells are large and tanniniferous with mucilaginous cell walls. The cuticle is adaxially thin, but abaxially well devel­oped, probably enabling the leaf to restrict water loss and to tolerate high light intensity and UV-B radiation. Epicuticular waxes, present in all species, comprise both soft and plate waxes. Epidermal structure proves to be taxonomically impor­tant at family, genus and species levels. Interspecific differences include arrangement of stomata and presence or absence of abaxial epidermal hair. Other diagnostic characters of the abaxial epidermal cells are arrangement,size and shape, cutic- ular ornamentation and presence or absence of wax platelets. Two groups of species on the basis of abaxial epidermal cell orientation are recognised. Many leaf epidermal features in Passerina are interpreted as structural adaptations to the Mediterranean climate of the Cape.

  12. Recent progress in floristic and taxonomic studies in Bulgaria

    Directory of Open Access Journals (Sweden)

    Ana Petrova

    2018-02-01

    Full Text Available An overview of floristic and taxonomic research on vascular plants in Bulgaria during the period of 2005-2016 has been made. The Bulgarian flora currently comprises 4064 species, belonging to 921 genera and 159 families. About 490 published papers were checked, in which 127 species were reported for the first time for the country by Bulgarian or foreign botanists, 11 of these taxa being ones new to science, while 51 are aliens. In the papers checked, 17 subspecies (two of them new to science and 18 hybrids (four of them new to science were also reported for the first time for the country, nine species were confirmed, and another 78 were unconfirmed, synonymised, or erroneously reported. In numerous papers, new localities for various species in different floristic regions in Bulgaria were reported. The books Flora of the Republic of Bulgaria Vol. 11, Red Data Book of the Republic of Bulgaria Vol. 1. Plants and Fungi, Atlas of Endemic Plants in Bulgaria, Invasive Alien Species of Vascular Plants in Bulgaria, Proceedings of Balkan Botanical Congress IV, etc., were published during the given period.

  13. Taxonomic and phytogeographic implications from ITS phylogeny in Berberis (Berberidaceae).

    Science.gov (United States)

    Kim, Young-Dong; Kim, Sung-Hee; Landrum, Leslie R

    2004-06-01

    A phylogeny based on the internal transcribed spacer (ITS) sequences from 79 taxa representing much of the diversity of Berberis L. (four major groups and 22 sections) was constructed for the first time. The phylogeny was basically congruent with the previous classification schemes at higher taxonomic levels, such as groups and subgroups. A notable exception is the non-monophyly of the group Occidentales of compound-leaved Berberis (previously separated as Mahonia). At lower levels, however, most of previous sections and subsections were not evident especially in simple-leaved Berberis. Possible relationship between section Horridae (group Occidentales) and the simple-leaved Berberis clade implies paraphyly of the compound-leaved Berberis. A well-known South America-Old World (mainly Asia) disjunctive distribution pattern of the simple-leaved Berberis is explained by a vicariance event occurring in the Cretaceous period. The ITS phylogeny also suggests that a possible connection between the Asian and South American groups through the North American species ( Berberis canadensis or B. fendleri) is highly unlikely.

  14. Taxonomic reappraisal of Antithamnion sparsum Tokida (Ceramiaceae, Rhodophyta).

    Science.gov (United States)

    Kim, Gwang Hoon; Han, He Kyong; Lim, Kook Jin

    2008-07-01

    The taxonomic criterion of Antithamnion sparsum was reappraised in comparison with A. densum and A. defectum based on crossing experiments, morphological observation, chromosome study and Random Amplified Polymorphic DNA (RAPD) analysis. These species had a very similar morphology but were sexually isolated. The chromosome number was n = ca. 24 for A. densum, n = ca. 21 for A. defectum, and n = ca. 44 for A. sparsum. All isolates of A. sparsum and A. densum showed polysiphonia-type life history Asexual reproduction was induced by favorable environmental conditions. In A. sparsum, 1-2% of male plants developed mitotic tetrasporangia together with spermatangia. In A. densum, 5-10% of tetraspores developed into asexual tetrasporophytes. Phylogenetic relationships between these species were examined using RAPD analysis, and A. glanduliferum was used as an outgroup. A total of 167 polymorphic RAPD markers amplified from 15 different primers were analyzed. Results suggested that these species were closely related, with A. defectum placed in the middle of A. sparsum and A. densum. Chromosome study and RAPD analysis implied that A. sparsum first separated from A. defectum through polyploidization and later A. densum evolved. These species may present another example of the narrow species concept in the genus Antithamnion.

  15. Taxonomic characterization of the cellulose-degrading bacterium NCIB 10462

    Energy Technology Data Exchange (ETDEWEB)

    Dees, C.; Ringleberg, D.; Scott, T.C. [Oak Ridge National Lab., TN (United States); Phelps, T. [Univ. of Tennessee, Knoxville, TN (United States)

    1994-06-01

    The gram negative cellulase-producing bacterium NCIB 10462 has been previously named Pseudomonas fluorescens subsp. or var. cellulosa. Since there is renewed interest in cellulose-degrading bacteria for use in bioconversion of cellulose to chemical feed stocks and fuels, we re-examined the characteristics of this microorganism to determine its proper taxonomic characterization and to further define it`s true metabolic potential. Metabolic and physical characterization of NCIB 10462 revealed that this was an alkalophilic, non-fermentative, gram negative, oxidase positive, motile, cellulose-degrading bacterium. The aerobic substrate utilization profile of this bacterium was found to have few characteristics consistent with a classification of P. fluorescens with a very low probability match with the genus Sphingomonas. Total lipid analysis did not reveal that any sphingolipid bases are produced by this bacterium. NCIB 10462 was found to grow best aerobically but also grows well in complex media under reducing conditions. NCIB 10462 grew slowly under full anaerobic conditions on complex media but growth on cellulosic media was found only under aerobic conditions. Total fatty acid analysis (MIDI) of NCIB 10462 failed to group this bacterium with a known pseudomonas species. However, fatty acid analysis of the bacteria when grown at temperatures below 37{degrees}C suggest that the organism is a pseudomonad. Since a predominant characteristic of this bacterium is it`s ability to degrade cellulose, we suggest it be called Pseudomonas cellulosa.

  16. Taxonomic status of the Columbia duskysnail (Truncatelloidea, Amnicolidae, Colligyrus).

    Science.gov (United States)

    Liu, Hsiu-Ping; Hershler, Robert; Rossel, Christopher S

    2015-01-01

    Undescribed freshwater snails (Amnicolidae: Colligyrus) from the Mount Hood region (northwestern United States) identified as a new species (commonly known as the Columbia duskysnail) in grey literature have been provided federal protection under the "survey and manage" provisions of the Northwest Forest Plan and have been placed on conservation watch lists. However, there are no published studies of the identity of these snails aside from a molecular phylogenetic analysis which delineated a close relationship between the single sampled population and Colligyrusgreggi, which is distributed more than 750 km to the east of the Mount Hood area. Here we examine the taxonomic status of the Columbia duskysnail based on additional molecular sampling of mitochondrial DNA sequences (COI) and morphological evidence. We found that the Columbia duskysnail is not a monophyletic group and forms a strongly supported clade with Colligyrusgreggi. The COI divergence between these broadly disjunct groups (2.1%) was somewhat larger than that within Colligyrusgreggi (1.0%) but considerably less than that among the three currently recognized species of Colligyrus (8.7-12.1%). Additionally we found that the Columbia duskysnail and Colligyrusgreggi cannot be consistently differentiated by previously reported diagnostic characters (size and shape of shell spire, pigmentation of body and penis) and are closely similar in other aspects of morphology. Based on these results we conclude that the Columbia duskysnail is conspecific with Colligyrusgreggi.

  17. Taxonomic status of the Columbia duskysnail (Truncatelloidea, Amnicolidae, Colligyrus

    Directory of Open Access Journals (Sweden)

    Hsiu-Ping Liu

    2015-07-01

    Full Text Available Undescribed freshwater snails (Amnicolidae: Colligyrus from the Mount Hood region (northwestern United States identified as a new species (commonly known as the Columbia duskysnail in grey literature have been provided federal protection under the “survey and manage” provisions of the Northwest Forest Plan and have been placed on conservation watch lists. However, there are no published studies of the identity of these snails aside from a molecular phylogenetic analysis which delineated a close relationship between the single sampled population and C. greggi, which is distributed more than 750 km to the east of the Mount Hood area. Here we examine the taxonomic status of the Columbia duskysnail based on additional molecular sampling of mitochondrial DNA sequences (COI and morphological evidence. We found that the Columbia duskysnail is not a monophyletic group and forms a strongly supported clade with C. greggi. The COI divergence between these broadly disjunct groups (2.1% was somewhat larger than that within C. greggi (1.0% but considerably less than that among the three currently recognized species of Colligyrus (8.7–12.1%. Additionally we found that the Columbia duskysnail and C. greggi cannot be consistently differentiated by previously reported diagnostic characters (size and shape of shell spire, pigmentation of body and penis and are closely similar in other aspects of morphology. Based on these results we conclude that the Columbia duskysnail is conspecific with C. greggi.

  18. A taxonomic revision of the genus Ceiba Mill. (Bombacaceae

    Directory of Open Access Journals (Sweden)

    Gibbs, Peter

    2003-12-01

    Full Text Available In this taxonomic revision of Ceiba Mill, (in which we include Chorisia Kunth we recognize 17 species, seven of which we group in the C. insignis. species aggregate. One new species is described, C. lupuna P.E. Gibbs & Semir from Peru, which is referred to the C. insignis agg., and one new subspecies, C. aesculifolia subsp. parvifolia (Rose P.E. Gibbs & Semir is recognized. Distribution maps are provided for 16 species (that for C. pentandra is restricted to the New World, and six species are illustrated.En esta revisión taxonómica de Ceiba, que incluye el género Chorisia, se reconocen 17 especies, siete de las cuales se agrupan en el complejo C. insignis. Se describe una nueva especie, C. lupuna P.E. Gibbs & Semir, del Perú, que pertenece al complejo de C. insignis, asf como una nueva subespecie, C. aesculifolia subsp. parvifolia (Rose P.E. Gibbs & Semir. Se incluyen mapas de distribuci6n de 16 especies (aunque en el caso de C. pentandra solo se representa su distribución americana y se dibujan detalles diagnósticos de seis especies.

  19. Taxonomic relationships among Phenacomys voles as inferred by cytochrome b

    Science.gov (United States)

    Bellinger, M.R.; Haig, S.M.; Forsman, E.D.; Mullins, T.D.

    2005-01-01

    Taxonomic relationships among red tree voles (Phenacomys longicaudus longicaudus, P. l. silvicola), the Sonoma tree vole (P. pomo), the white-footed vole (P. albipes), and the heather vole (P. intermedius) were examined using 664 base pairs of the mitochondrial cytochrome b gene. Results indicate specific differences among red tree voles, Sonoma tree voles, white-footed voles, and heather voles, but no clear difference between the 2 Oregon subspecies of red tree voles (P. l. longicaudus and P. l. silvicola). Our data further indicated a close relationship between tree voles and albipes, validating inclusion of albipes in the subgenus Arborimus. These 3 congeners shared a closer relationship to P. intermedius than to other arvicolids. A moderate association between porno and albipes was indicated by maximum parsimony and neighbor-joining phylogenetic analyses. Molecular clock estimates suggest a Pleistocene radiation of the Arborimus clade, which is concordant with pulses of diversification observed in other murid rodents. The generic rank of Arborimus is subject to interpretation of data.

  20. Evaluation of severe accident risks: Methodology for the containment, source term, consequence, and risk integration analyses. Volume 1, Revision 1

    International Nuclear Information System (INIS)

    Gorham, E.D.; Breeding, R.J.; Brown, T.D.; Harper, F.T.; Helton, J.C.; Murfin, W.B.; Hora, S.C.

    1993-12-01

    NUREG-1150 examines the risk to the public from five nuclear power plants. The NUREG-1150 plant studies are Level III probabilistic risk assessments (PRAs) and, as such, they consist of four analysis components: accident frequency analysis, accident progression analysis, source term analysis, and consequence analysis. This volume summarizes the methods utilized in performing the last three components and the assembly of these analyses into an overall risk assessment. The NUREG-1150 analysis approach is based on the following ideas: (1) general and relatively fast-running models for the individual analysis components, (2) well-defined interfaces between the individual analysis components, (3) use of Monte Carlo techniques together with an efficient sampling procedure to propagate uncertainties, (4) use of expert panels to develop distributions for important phenomenological issues, and (5) automation of the overall analysis. Many features of the new analysis procedures were adopted to facilitate a comprehensive treatment of uncertainty in the complete risk analysis. Uncertainties in the accident frequency, accident progression and source term analyses were included in the overall uncertainty assessment. The uncertainties in the consequence analysis were not included in this assessment. A large effort was devoted to the development of procedures for obtaining expert opinion and the execution of these procedures to quantify parameters and phenomena for which there is large uncertainty and divergent opinions in the reactor safety community

  1. Integrated Sources of Polarization Entangled Photon Pair States via Spontaneous Four-Wave Mixing in AlGaAs Waveguides

    Science.gov (United States)

    Kultavewuti, Pisek

    Polarization-entangled photon pair states (PESs) are indispensable in several quantum protocols that should be implemented in an integrated photonic circuit for realizing a practical quantum technology. Preparing such states in integrated waveguides is in fact a challenge due to polarization mode dispersion. Unlike other conventional ways that are plagued with complications in fabrication or in state generation, in this thesis, the scheme based on parallel spontaneous four-wave mixing processes of two polarization waveguide modes is thoroughly studied in theory and experimentation for the polarization entanglement generation. The scheme in fact needs the modal dispersion, contradictory to the general perception, as revealed by a full quantum mechanical framework. The proper modal dispersion balances the effects of temporal walk-off and state factorizability. The study also shows that the popular standard platform such as a silicon-on-insulator wafer is far from suitable to implement the proposed simple generation technique. Proven by the quantum state tomography, the technique produces a highly-entangled state with a maximum concurrence of 0.97 +/- 0:01 from AlGaAs waveguides. In addition, the devices directly generated Bell states with an observed fidelity of 0.92 +/- 0:01 without any post-generation compensating steps. Novel suspended device structures, including their components, are then investigated numerically and experimentally characterized in pursuit of finding the geometry with the optimal dispersion property. The 700 nm x 1100 nm suspended rectangular waveguide is identified as the best geometry with a predicted maximum concurrence of 0.976 and a generation bandwidth of 3.3 THz. The suspended waveguide fabrication procedure adds about 15 dB/cm and 10 dB/cm of propagation loss to the TE and TM mode respectively, on top of the loss in corresponding full-cladding waveguides. Bridges, which structurally support the suspended waveguides, are optimized using

  2. IIS--Integrated Interactome System: a web-based platform for the annotation, analysis and visualization of protein-metabolite-gene-drug interactions by integrating a variety of data sources and tools.

    Science.gov (United States)

    Carazzolle, Marcelo Falsarella; de Carvalho, Lucas Miguel; Slepicka, Hugo Henrique; Vidal, Ramon Oliveira; Pereira, Gonçalo Amarante Guimarães; Kobarg, Jörg; Meirelles, Gabriela Vaz

    2014-01-01

    High-throughput screening of physical, genetic and chemical-genetic interactions brings important perspectives in the Systems Biology field, as the analysis of these interactions provides new insights into protein/gene function, cellular metabolic variations and the validation of therapeutic targets and drug design. However, such analysis depends on a pipeline connecting different tools that can automatically integrate data from diverse sources and result in a more comprehensive dataset that can be properly interpreted. We describe here the Integrated Interactome System (IIS), an integrative platform with a web-based interface for the annotation, analysis and visualization of the interaction profiles of proteins/genes, metabolites and drugs of interest. IIS works in four connected modules: (i) Submission module, which receives raw data derived from Sanger sequencing (e.g. two-hybrid system); (ii) Search module, which enables the user to search for the processed reads to be assembled into contigs/singlets, or for lists of proteins/genes, metabolites and drugs of interest, and add them to the project; (iii) Annotation module, which assigns annotations from several databases for the contigs/singlets or lists of proteins/genes, generating tables with automatic annotation that can be manually curated; and (iv) Interactome module, which maps the contigs/singlets or the uploaded lists to entries in our integrated database, building networks that gather novel identified interactions, protein and metabolite expression/concentration levels, subcellular localization and computed topological metrics, GO biological processes and KEGG pathways enrichment. This module generates a XGMML file that can be imported into Cytoscape or be visualized directly on the web. We have developed IIS by the integration of diverse databases following the need of appropriate tools for a systematic analysis of physical, genetic and chemical-genetic interactions. IIS was validated with yeast two

  3. Load Frequency Control by use of a Number of Both Heat Pump Water Heaters and Electric Vehicles in Power System with a Large Integration of Renewable Energy Sources

    Science.gov (United States)

    Masuta, Taisuke; Shimizu, Koichiro; Yokoyama, Akihiko

    In Japan, from the viewpoints of global warming countermeasures and energy security, it is expected to establish a smart grid as a power system into which a large amount of generation from renewable energy sources such as wind power generation and photovoltaic generation can be installed. Measures for the power system stability and reliability are necessary because a large integration of these renewable energy sources causes some problems in power systems, e.g. frequency fluctuation and distribution voltage rise, and Battery Energy Storage System (BESS) is one of effective solutions to these problems. Due to a high cost of the BESS, our research group has studied an application of controllable loads such as Heat Pump Water Heater (HPWH) and Electric Vehicle (EV) to the power system control for reduction of the required capacity of BESS. This paper proposes a new coordinated Load Frequency Control (LFC) method for the conventional power plants, the BESS, the HPWHs, and the EVs. The performance of the proposed LFC method is evaluated by the numerical simulations conducted on a power system model with a large integration of wind power generation and photovoltaic generation.

  4. A Current Control Approach for an Abnormal Grid Supplied Ultra Sparse Z-Source Matrix Converter with a Particle Swarm Optimization Proportional-Integral Induction Motor Drive Controller

    Directory of Open Access Journals (Sweden)

    Seyed Sina Sebtahmadi

    2016-11-01

    Full Text Available A rotational d-q current control scheme based on a Particle Swarm Optimization- Proportional-Integral (PSO-PI controller, is used to drive an induction motor (IM through an Ultra Sparse Z-source Matrix Converter (USZSMC. To minimize the overall size of the system, the lowest feasible values of Z-source elements are calculated by considering the both timing and aspects of the circuit. A meta-heuristic method is integrated to the control system in order to find optimal coefficient values in a single multimodal problem. Henceforth, the effect of all coefficients in minimizing the total harmonic distortion (THD and balancing the stator current are considered simultaneously. Through changing the reference point of magnitude or frequency, the modulation index can be automatically adjusted and respond to changes without heavy computational cost. The focus of this research is on a reliable and lightweight system with low computational resources. The proposed scheme is validated through both simulation and experimental results.

  5. Multi-stage-flash desalination plants of relative small performance with integrated pressurized water reactors as a nuclear heat source

    International Nuclear Information System (INIS)

    Petersen, G.; Peltzer, M.

    1977-01-01

    In the Krupp-GKSS joint study MINIPLEX the requirements for seawater-desalination plants with a performance in the range of 10 000 to 80 000 m 3 distillate per day heated by a nuclear reactor are investigated. The reactor concept is similar to the Integrated Pressurized Water Reactor (IPWR) of the nuclear ship OTTO HAHN. The design study shows that IPWR systems have specific advantages up to 200 MWth compared to other reactor types at least being adapted for single- and dual-purpose desalination plants. The calculated costs of the desalinated water show that due to fuel cost advantages of reactors small and medium nuclear desalination plants are economically competetive with oil-fired plants since the steep rise of oil price in autumn 1973. (author)

  6. Taxonomic and Functional Responses of Soil Microbial Communities to Annual Removal of Aboveground Plant Biomass

    Science.gov (United States)

    Guo, Xue; Zhou, Xishu; Hale, Lauren; Yuan, Mengting; Feng, Jiajie; Ning, Daliang; Shi, Zhou; Qin, Yujia; Liu, Feifei; Wu, Liyou; He, Zhili; Van Nostrand, Joy D.; Liu, Xueduan; Luo, Yiqi; Tiedje, James M.; Zhou, Jizhong

    2018-01-01

    Clipping, removal of aboveground plant biomass, is an important issue in grassland ecology. However, few studies have focused on the effect of clipping on belowground microbial communities. Using integrated metagenomic technologies, we examined the taxonomic and functional responses of soil microbial communities to annual clipping (2010–2014) in a grassland ecosystem of the Great Plains of North America. Our results indicated that clipping significantly (P microbial respiration rates. Annual temporal variation within the microbial communities was much greater than the significant changes introduced by clipping, but cumulative effects of clipping were still observed in the long-term scale. The abundances of some bacterial and fungal lineages including Actinobacteria and Bacteroidetes were significantly (P microbial communities were significantly correlated with soil respiration and plant productivity. Intriguingly, clipping effects on microbial function may be highly regulated by precipitation at the interannual scale. Altogether, our results illustrated the potential of soil microbial communities for increased soil organic matter decomposition under clipping land-use practices. PMID:29904372

  7. MetaPathways v2.5: quantitative functional, taxonomic and usability improvements.

    Science.gov (United States)

    Konwar, Kishori M; Hanson, Niels W; Bhatia, Maya P; Kim, Dongjae; Wu, Shang-Ju; Hahn, Aria S; Morgan-Lang, Connor; Cheung, Hiu Kan; Hallam, Steven J

    2015-10-15

    Next-generation sequencing is producing vast amounts of sequence information from natural and engineered ecosystems. Although this data deluge has an enormous potential to transform our lives, knowledge creation and translation need software applications that scale with increasing data processing and analysis requirements. Here, we present improvements to MetaPathways, an annotation and analysis pipeline for environmental sequence information that expedites this transformation. We specifically address pathway prediction hazards through integration of a weighted taxonomic distance and enable quantitative comparison of assembled annotations through a normalized read-mapping measure. Additionally, we improve LAST homology searches through BLAST-equivalent E-values and output formats that are natively compatible with prevailing software applications. Finally, an updated graphical user interface allows for keyword annotation query and projection onto user-defined functional gene hierarchies, including the Carbohydrate-Active Enzyme database. MetaPathways v2.5 is available on GitHub: http://github.com/hallamlab/metapathways2. shallam@mail.ubc.ca Supplementary data are available at Bioinformatics online. © The Author 2015. Published by Oxford University Press.

  8. Hydrocarbon migration and accumulation in the Upper Cretaceous Qingshankou Formation, Changling Sag, southern Songliao Basin: Insights from integrated analyses of fluid inclusion, oil source correlation and basin modelling

    Science.gov (United States)

    Dong, Tian; He, Sheng; Wang, Dexi; Hou, Yuguang

    2014-08-01

    The Upper Cretaceous Qingshankou Formation acts as both the source and reservoir sequence in the Changling Sag, situated in the southern end of the Songliao Basin, northeast China. An integrated approach involving determination of hydrocarbon charging history, oil source correlation and hydrocarbon generation dynamic modeling was used to investigate hydrocarbon migration processes and further predict the favorable targets of hydrocarbon accumulations in the Qingshankou Formation. The hydrocarbon generation and charge history was investigated using fluid inclusion analysis, in combination with stratigraphic burial and thermal modeling. The source rocks began to generate hydrocarbons at around 82 Ma and the hydrocarbon charge event occurred from approximately 78 Ma to the end of Cretaceous (65.5 Ma) when a large tectonic uplift took place. Correlation of stable carbon isotopes of oils and extracts of source rocks indicates that oil was generated mainly from the first member of Qingshankou Formation (K2qn1), suggesting that hydrocarbon may have migrated vertically. Three dimensional (3D) petroleum system modeling was used to evaluate the processes of secondary hydrocarbon migration in the Qingshankou Formation since the latest Cretaceous. During the Late Cretaceous, hydrocarbon, mainly originated from the Qianan depression, migrated laterally to adjacent structural highs. Subsequent tectonic inversion, defined as the late Yanshan Orogeny, significantly changed hydrocarbon migration patterns, probably causing redistribution of primary hydrocarbon reservoirs. In the Tertiary, the Heidimiao depression was buried much deeper than the Qianan depression and became the main source kitchen. Hydrocarbon migration was primarily controlled by fluid potential and generally migrated from relatively high potential areas to low potential areas. Structural highs and lithologic transitions are potential traps for current oil and gas exploration. Finally, several preferred hydrocarbon

  9. People-Technology-Ecosystem Integration: A Framework to Ensure Regional Interoperability for Safety, Sustainability, and Resilience of Interdependent Energy, Water, and Seafood Sources in the (Persian) Gulf.

    Science.gov (United States)

    Meshkati, Najmedin; Tabibzadeh, Maryam; Farshid, Ali; Rahimi, Mansour; Alhanaee, Ghena

    2016-02-01

    The aim of this study is to identify the interdependencies of human and organizational subsystems of multiple complex, safety-sensitive technological systems and their interoperability in the context of sustainability and resilience of an ecosystem. Recent technological disasters with severe environmental impact are attributed to human factors and safety culture causes. One of the most populous and environmentally sensitive regions in the world, the (Persian) Gulf, is on the confluence of an exponentially growing number of two industries--nuclear power and seawater desalination plants--that is changing its land- and seascape. Building upon Rasmussen's model, a macrosystem integrative framework, based on the broader context of human factors, is developed, which can be considered in this context as a "meta-ergonomics" paradigm, for the analysis of interactions, design of interoperability, and integration of decisions of major actors whose actions can affect safety and sustainability of the focused industries during routine and nonroutine (emergency) operations. Based on the emerging realities in the Gulf region, it is concluded that without such systematic approach toward addressing the interdependencies of water and energy sources, sustainability will be only a short-lived dream and prosperity will be a disappearing mirage for millions of people in the region. This multilayered framework for the integration of people, technology, and ecosystem--which has been applied to the (Persian) Gulf--offers a viable and vital approach to the design and operation of large-scale complex systems wherever the nexus of water, energy, and food sources are concerned, such as the Black Sea. © 2016, Human Factors and Ergonomics Society.

  10. MARTA: a suite of Java-based tools for assigning taxonomic status to DNA sequences.

    Science.gov (United States)

    Horton, Matthew; Bodenhausen, Natacha; Bergelson, Joy

    2010-02-15

    We have created a suite of Java-based software to better provide taxonomic assignments to DNA sequences. We anticipate that the program will be useful for protistologists, virologists, mycologists and other microbial ecologists. The program relies on NCBI utilities including the BLAST software and Taxonomy database and is easily manipulated at the command-line to specify a BLAST candidate's query-coverage or percent identity requirements; other options include the ability to set minimal consensus requirements (%) for each of the eight major taxonomic ranks (Domain, Kingdom, Phylum, ...) and whether to consider lower scoring candidates when the top-hit lacks taxonomic classification.

  11. Taxonomic formula of geoecological hazard for the cadastral districts of Moscow city

    Directory of Open Access Journals (Sweden)

    Karfidova E.A.

    2018-01-01

    Full Text Available the article proposes a method for calculating the taxonomic formula for the geoecological hazard of the cadastral district. The engineering-geological zoning map uses for calculating the balance of the territory by the hazard index – the basis of the taxonomic formula. The taxonomic formula as an open data set makes it possible to characterize the geoecological hazards of the territory of a district. The geoenvironmental hazard map of cadastral districts is necessary for regional model of spatial planning at the municipal level.

  12. A taxonomic, functional, and phylogenetic perspective on the community assembly of passerine birds along an elevational gradient in southwest China.

    Science.gov (United States)

    He, Xuelian; Luo, Kang; Brown, Calum; Lin, Luxiang

    2018-03-01

    Integrating multiple facets of biodiversity to describe spatial and temporal distribution patterns is one way of revealing the mechanisms driving community assembly. We assessed the species, functional, and phylogenetic composition and structure of passerine bird communities along an elevational gradient both in wintering and breeding seasons in the Ailao Mountains, southwest China, in order to identify the dominant ecological processes structuring the communities and how these processes change with elevation and season. Our research confirms that the highest taxonomic diversity, and distinct community composition, was found in the moist evergreen broadleaf forest at high elevation in both seasons. Environmental filtering was the dominant force at high elevations with relatively cold and wet climatic conditions, while the observed value of mean pairwise functional and phylogenetic distances of low elevation was constantly higher than expectation in two seasons, suggested interspecific competition could play the key role at low elevations, perhaps because of relative rich resource result from complex vegetation structure and human-induced disturbance. Across all elevations, there was a trend of decreasing intensity of environmental filtering whereas increasing interspecific competition from wintering season to breeding season. This was likely due to the increased resource availability but reproduction-associated competition in the summer months. In general, there is a clear justification for conservation efforts to protect entire elevational gradients in the Ailao Mountains, given the distinct taxonomic, functional, and phylogenetic compositions and also elevational migration pattern in passerine bird communities.

  13. A Taxonomic Reduced-Space Pollen Model for Paleoclimate Reconstruction

    Science.gov (United States)

    Wahl, E. R.; Schoelzel, C.

    2010-12-01

    Paleoenvironmental reconstruction from fossil pollen often attempts to take advantage of the rich taxonomic diversity in such data. Here, a taxonomically "reduced-space" reconstruction model is explored that would be parsimonious in introducing parameters needing to be estimated within a Bayesian Hierarchical Modeling context. This work involves a refinement of the traditional pollen ratio method. This method is useful when one (or a few) dominant pollen type(s) in a region have a strong positive correlation with a climate variable of interest and another (or a few) dominant pollen type(s) have a strong negative correlation. When, e.g., counts of pollen taxa a and b (r >0) are combined with pollen types c and d (r logistic generalized linear model (GLM). The GLM can readily model this relationship in the forward form, pollen = g(climate), which is more physically realistic than inverse models often used in paleoclimate reconstruction [climate = f(pollen)]. The specification of the model is: rnum Bin(n,p), where E(r|T) = p = exp(η)/[1+exp(η)], and η = α + β(T); r is the pollen ratio formed as above, rnum is the ratio numerator, n is the ratio denominator (i.e., the sum of pollen counts), the denominator-specific count is (n - rnum), and T is the temperature at each site corresponding to a specific value of r. Ecological and empirical screening identified the model (Spruce+Birch) / (Spruce+Birch+Oak+Hickory) for use in temperate eastern N. America. α and β were estimated using both "traditional" and Bayesian GLM algorithms (in R). Although it includes only four pollen types, the ratio model yields more explained variation ( 80%) in the pollen-temperature relationship of the study region than a 64-taxon modern analog technique (MAT). Thus, the new pollen ratio method represents an information-rich, reduced space data model that can be efficiently employed in a BHM framework. The ratio model can directly reconstruct past temperature by solving the GLM equations

  14. EAU standardised medical terminology for urologic imaging: a taxonomic approach.

    Science.gov (United States)

    Loch, Tillmann; Carey, Brendan; Walz, Jochen; Fulgham, Pat Fox

    2015-05-01

    The terminology and abbreviations used in urologic imaging have generally been adopted on an ad hoc basis by different speciality groups; however, there is a need for shared nomenclature to facilitate clinical communication and collaborative research. This work reviews the current nomenclature for urologic imaging used in clinical practice and proposes a taxonomy and terminology for urologic imaging studies. A list of terms used in urologic imaging were compiled from guidelines published by the European Association of Urology and the American Urological Association and from the American College of Radiology Appropriateness Criteria. Terms searched were grouped into broad categories based on technology, and imaging terms were further stratified based on the anatomic extent, contrast or phases, technique or modifiers, and combinations or fusions. Terms that had a high degree of utilisation were classified as accepted. We propose a new taxonomy to define a more useful and acceptable nomenclature model acceptable to all health professionals involved in urology. The major advantage of a taxonomic approach to the classification of urologic imaging studies is that it provides a flexible framework for classifying the modifications of current imaging modalities and allows the incorporation of new imaging modalities. The adoption of this hierarchical classification model ranging from the most general to the most detailed descriptions should facilitate hierarchical searches of the medical literature using both general and specific terms. This work is limited in its scope, as it is not currently all-inclusive. This will hopefully be addressed by future modification as others embrace the concept and work towards uniformity in nomenclature. This paper provides a noncomprehensive list of the most widely used terms across different specialties. This list can be used as the basis for further discussion, development, and enhancement. In this paper we describe a classification system

  15. Testing for variation in taxonomic extinction probabilities: a suggested methodology and some results

    Science.gov (United States)

    Conroy, M.J.; Nichols, J.D.

    1984-01-01

    Several important questions in evolutionary biology and paleobiology involve sources of variation in extinction rates. In all cases of which we are aware, extinction rates have been estimated from data in which the probability that an observation (e.g., a fossil taxon) will occur is related both to extinction rates and to what we term encounter probabilities. Any statistical method for analyzing fossil data should at a minimum permit separate inferences on these two components. We develop a method for estimating taxonomic extinction rates from stratigraphic range data and for testing hypotheses about variability in these rates. We use this method to estimate extinction rates and to test the hypothesis of constant extinction rates for several sets of stratigraphic range data. The results of our tests support the hypothesis that extinction rates varied over the geologic time periods examined. We also present a test that can be used to identify periods of high or low extinction probabilities and provide an example using Phanerozoic invertebrate data. Extinction rates should be analyzed using stochastic models, in which it is recognized that stratigraphic samples are random varlates and that sampling is imperfect

  16. Integration of sources in academic writing: A corpus-based study of citation practices in essay writing in two departments at the University of Botswana

    Directory of Open Access Journals (Sweden)

    Boitumelo T. Ramoroka

    2014-04-01

    Full Text Available The ability to cite sources appropriately is an important feature of academic writing. Academic writers are expected to integrate ideas of others into their texts and take a stance towards the reported material as they develop their arguments. Despite this importance, research has shown that citation presents considerable difficulties for students, particularly non-native English speakers. Such difficulties include using citations effectively in writing and understanding them in reading, expressing one’s voice and signalling citations in writing so that there is a clear distinction between one’s ideas and those derived from source materials. This study investigates the types of reporting verbs used by students to refer to the work of others and the extent to which they evaluate the work of others in their writing. It draws from a corpus of approximately 80 000 words from essays written by students in two departments at the University of Botswana (Botswana. The findings show that students used more informing verbs, associated with the neutral passing of information from the source to the reader, without interpreting the information cited, compared with argumentative verbs (which signify an evaluative role. The results of the study underscore the importance of teaching reporting verbs in the English for academic purposes classroom and making students aware of their evaluative potential.

  17. Structurally Integrated Photoluminescence-Based Lactate Sensor Using Organic Light Emitting Devices (OLEDs) as the Light Source

    International Nuclear Information System (INIS)

    Chengliang Qian

    2006-01-01

    Multianalyte bio(chemical) sensors are extensively researched for monitoring analytes in complex systems, such as blood serum. As a step towards developing such multianalyte sensors, we studied a novel, structurally integrated, organic light emitting device (OLED)-based sensing platform for detection of lactate. Lactate biosensors have attracted numerous research efforts, due to their wide applications in clinical diagnosis, athletic training and food industry. The OLED-based sensor is based on monitoring the oxidation reaction of lactate, which is catalyzed by the lactate oxidase (LOX) enzyme. The sensing component is based on an oxygen-sensitive dye, Platinum octaethyl porphyrin (PtOEP), whose photoluminescence (PL) lifetime τ decreases as the oxygen level increases. The PtOEP dye was embedded in a thin film polystyrene (PS) matrix; the LOX was dissolved in solution or immobilized in a sol-gel matrix. τ was measured as a function of the lactate concentration; as the lactate concentration increases, τ increases due to increased oxygen consumption. The sensors performance is discussed in terms of the detection sensitivity, dynamic range, and response time. A response time of ∼32 sec was achieved when the LOX was dissolved in solution and kept in a closed cell. Steps towards development of a multianalyte sensor array using an array of individually addressable OLED pixels were also presented

  18. Structurally Integrated Photoluminescence-Based Lactate Sensor Using Organic Light Emitting Devices (OLEDs) as the Light Source

    Energy Technology Data Exchange (ETDEWEB)

    Qian, Chengliang [Iowa State Univ., Ames, IA (United States)

    2006-01-01

    Multianalyte bio(chemical) sensors are extensively researched for monitoring analytes in complex systems, such as blood serum. As a step towards developing such multianalyte sensors, we studied a novel, structurally integrated, organic light emitting device (OLED)-based sensing platform for detection of lactate. Lactate biosensors have attracted numerous research efforts, due to their wide applications in clinical diagnosis, athletic training and food industry. The OLED-based sensor is based on monitoring the oxidation reaction of lactate, which is catalyzed by the lactate oxidase (LOX) enzyme. The sensing component is based on an oxygen-sensitive dye, Platinum octaethyl porphyrin (PtOEP), whose photoluminescence (PL) lifetime τ decreases as the oxygen level increases. The PtOEP dye was embedded in a thin film polystyrene (PS) matrix; the LOX was dissolved in solution or immobilized in a sol-gel matrix. τ was measured as a function of the lactate concentration; as the lactate concentration increases, τ increases due to increased oxygen consumption. The sensors performance is discussed in terms of the detection sensitivity, dynamic range, and response time. A response time of ~32 sec was achieved when the LOX was dissolved in solution and kept in a closed cell. Steps towards development of a multianalyte sensor array using an array of individually addressable OLED pixels were also presented.

  19. Polyphasic taxonomic analysis establishes Mycobacterium indicus pranii as a distinct species.

    Directory of Open Access Journals (Sweden)

    Vikram Saini

    Full Text Available BACKGROUND: Mycobacterium indicus pranii (MIP, popularly known as Mw, is a cultivable, non-pathogenic organism, which, based on its growth and metabolic properties, is classified in Runyon Group IV along with M. fortuitum, M. smegmatis and M. vaccae. The novelty of this bacterium was accredited to its immunological ability to undergo antigen driven blast transformation of leukocytes and delayed hypersensitivity skin test in leprosy patients, a disease endemic in the Indian sub-continent. Consequently, MIP has been extensively evaluated for its biochemical and immunological properties leading to its usage as an immunomodulator in leprosy and tuberculosis patients. However, owing to advances in sequencing and culture techniques, the citing of new strains with almost 100% similarity in the seque