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Sample records for source catalog psc

A catalog of pre-main-sequence emission-line stars with IRAS source associations

International Nuclear Information System (INIS)

Weintraub, D.A.

1990-01-01

To aid in finding premain-sequence (PMS) emission-line stars that might have dusty circumstellar environments, 361 PMS stars that are associated with 304 separate IRAS sources were identified. These stars include 200 classical T Tauri stars, 25 weak-lined (naked) T Tauri stars, 56 Herbig Ae/Be stars, six FU Orionis stars, and two SU Aurigae stars. All six of the FU Orionis stars surveyed by IRAS were detected. Of the PMS-IRAS Point Source Catalog (PSC) associations, 90 are new and are not noted in the PSC. The other 271 entries include 104 that are correctly identified in the PSC but have not yet appeared in the literature, 56 more that can be found in both the PSC and in the published and unpublished iterature, and 111 that are in the literature but not in the PSC. Spectral slope diagrams constructed from the 12-, 25-, and 60-micron flux densities reveal unique distributions for the different PMS subclasses; these diagrams may help identify the best candidate PMS stars for observations of circumstellar dust. 30 refs
Chandra Source Catalog: User Interface

Science.gov (United States)

Bonaventura, Nina; Evans, Ian N.; Rots, Arnold H.; Tibbetts, Michael S.; van Stone, David W.; Zografou, Panagoula; Primini, Francis A.; Glotfelty, Kenny J.; Anderson, Craig S.; Chen, Judy C.; Davis, John E.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G., II; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; He, Helen; Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Plummer, David A.; Refsdal, Brian L.; Siemiginowska, Aneta L.; Sundheim, Beth A.; Winkelman, Sherry L.

2009-09-01

The Chandra Source Catalog (CSC) is intended to be the definitive catalog of all X-ray sources detected by Chandra. For each source, the CSC provides positions and multi-band fluxes, as well as derived spatial, spectral, and temporal source properties. Full-field and source region data products are also available, including images, photon event lists, light curves, and spectra. The Chandra X-ray Center CSC website (http://cxc.harvard.edu/csc/) is the place to visit for high-level descriptions of each source property and data product included in the catalog, along with other useful information, such as step-by-step catalog tutorials, answers to FAQs, and a thorough summary of the catalog statistical characterization. Eight categories of detailed catalog documents may be accessed from the navigation bar on most of the 50+ CSC pages; these categories are: About the Catalog, Creating the Catalog, Using the Catalog, Catalog Columns, Column Descriptions, Documents, Conferences, and Useful Links. There are also prominent links to CSCview, the CSC data access GUI, and related help documentation, as well as a tutorial for using the new CSC/Google Earth interface. Catalog source properties are presented in seven scientific categories, within two table views: the Master Source and Source Observations tables. Each X-ray source has one ``master source'' entry and one or more ``source observation'' entries, the details of which are documented on the CSC ``Catalog Columns'' pages. The master source properties represent the best estimates of the properties of a source; these are extensively described on the following pages of the website: Position and Position Errors, Source Flags, Source Extent and Errors, Source Fluxes, Source Significance, Spectral Properties, and Source Variability. The eight tutorials (``threads'') available on the website serve as a collective guide for accessing, understanding, and manipulating the source properties and data products provided by the catalog.
VizieR Online Data Catalog: The Red MSX Source Survey: massive protostars (Lumsden+, 2013)

Science.gov (United States)

Lumsden, S. L.; Hoare, M. G.; Urquhart, J. S.; Oudmaijer, R. D.; Davies, B.; Mottram, J. C.; Cooper, H. D. B.; Moore, T. J. T.

2013-10-01

The Midcourse Space Experiment (MSX) satellite mission included an astronomy experiment (SPIRIT III) designed to acquire mid-infrared photometry of sources in the Galactic plane (bMSX had a raw resolution of 18.3", a beam size 50 times smaller than that of IRAS at 12 and 25um. MSX observed six bands between 4 and 21um, of which the four between 8 and 21um are sensitive to astronomical sources. We used v2.3 of the MSX PSC (Egan et al. 2003, Cat. V/114) as our basic input, restricting ourselves to the main Galactic plane catalog, which excludes sources seen in only a single observing pass and those seen in multiple passes but with low significance. We restricted our catalog to 10source confusion, as well as kinematic distance ambiguities near the Galactic center. (2 data files).
Hubble Source Catalog

Science.gov (United States)

Lubow, S.; Budavári, T.

2013-10-01

We have created an initial catalog of objects observed by the WFPC2 and ACS instruments on the Hubble Space Telescope (HST). The catalog is based on observations taken on more than 6000 visits (telescope pointings) of ACS/WFC and more than 25000 visits of WFPC2. The catalog is obtained by cross matching by position in the sky all Hubble Legacy Archive (HLA) Source Extractor source lists for these instruments. The source lists describe properties of source detections within a visit. The calculations are performed on a SQL Server database system. First we collect overlapping images into groups, e.g., Eta Car, and determine nearby (approximately matching) pairs of sources from different images within each group. We then apply a novel algorithm for improving the cross matching of pairs of sources by adjusting the astrometry of the images. Next, we combine pairwise matches into maximal sets of possible multi-source matches. We apply a greedy Bayesian method to split the maximal matches into more reliable matches. We test the accuracy of the matches by comparing the fluxes of the matched sources. The result is a set of information that ties together multiple observations of the same object. A byproduct of the catalog is greatly improved relative astrometry for many of the HST images. We also provide information on nondetections that can be used to determine dropouts. With the catalog, for the first time, one can carry out time domain, multi-wavelength studies across a large set of HST data. The catalog is publicly available. Much more can be done to expand the catalog capabilities.
THE CHANDRA SOURCE CATALOG

International Nuclear Information System (INIS)

Evans, Ian N.; Primini, Francis A.; Glotfelty, Kenny J.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G.; Grier, John D.; Hain, Roger M.; Harbo, Peter N.; He Xiangqun; Karovska, Margarita; Kashyap, Vinay L.; Davis, John E.; Houck, John C.; Hall, Diane M.

2010-01-01

The Chandra Source Catalog (CSC) is a general purpose virtual X-ray astrophysics facility that provides access to a carefully selected set of generally useful quantities for individual X-ray sources, and is designed to satisfy the needs of a broad-based group of scientists, including those who may be less familiar with astronomical data analysis in the X-ray regime. The first release of the CSC includes information about 94,676 distinct X-ray sources detected in a subset of public Advanced CCD Imaging Spectrometer imaging observations from roughly the first eight years of the Chandra mission. This release of the catalog includes point and compact sources with observed spatial extents ∼<30''. The catalog (1) provides access to the best estimates of the X-ray source properties for detected sources, with good scientific fidelity, and directly supports scientific analysis using the individual source data; (2) facilitates analysis of a wide range of statistical properties for classes of X-ray sources; and (3) provides efficient access to calibrated observational data and ancillary data products for individual X-ray sources, so that users can perform detailed further analysis using existing tools. The catalog includes real X-ray sources detected with flux estimates that are at least 3 times their estimated 1σ uncertainties in at least one energy band, while maintaining the number of spurious sources at a level of ∼<1 false source per field for a 100 ks observation. For each detected source, the CSC provides commonly tabulated quantities, including source position, extent, multi-band fluxes, hardness ratios, and variability statistics, derived from the observations in which the source is detected. In addition to these traditional catalog elements, for each X-ray source the CSC includes an extensive set of file-based data products that can be manipulated interactively, including source images, event lists, light curves, and spectra from each observation in which a
The Chandra Source Catalog

Science.gov (United States)

Evans, Ian N.; Primini, Francis A.; Glotfelty, Kenny J.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Davis, John E.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G., II; Grier, John D.; Hain, Roger M.; Hall, Diane M.; Harbo, Peter N.; He, Xiangqun Helen; Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Plummer, David A.; Refsdal, Brian L.; Rots, Arnold H.; Siemiginowska, Aneta; Sundheim, Beth A.; Tibbetts, Michael S.; Van Stone, David W.; Winkelman, Sherry L.; Zografou, Panagoula

2010-07-01

The Chandra Source Catalog (CSC) is a general purpose virtual X-ray astrophysics facility that provides access to a carefully selected set of generally useful quantities for individual X-ray sources, and is designed to satisfy the needs of a broad-based group of scientists, including those who may be less familiar with astronomical data analysis in the X-ray regime. The first release of the CSC includes information about 94,676 distinct X-ray sources detected in a subset of public Advanced CCD Imaging Spectrometer imaging observations from roughly the first eight years of the Chandra mission. This release of the catalog includes point and compact sources with observed spatial extents lsim30''. The catalog (1) provides access to the best estimates of the X-ray source properties for detected sources, with good scientific fidelity, and directly supports scientific analysis using the individual source data; (2) facilitates analysis of a wide range of statistical properties for classes of X-ray sources; and (3) provides efficient access to calibrated observational data and ancillary data products for individual X-ray sources, so that users can perform detailed further analysis using existing tools. The catalog includes real X-ray sources detected with flux estimates that are at least 3 times their estimated 1σ uncertainties in at least one energy band, while maintaining the number of spurious sources at a level of lsim1 false source per field for a 100 ks observation. For each detected source, the CSC provides commonly tabulated quantities, including source position, extent, multi-band fluxes, hardness ratios, and variability statistics, derived from the observations in which the source is detected. In addition to these traditional catalog elements, for each X-ray source the CSC includes an extensive set of file-based data products that can be manipulated interactively, including source images, event lists, light curves, and spectra from each observation in which a
The Chandra Source Catalog: Processing and Infrastructure

Science.gov (United States)

Evans, Janet; Evans, Ian N.; Glotfelty, Kenny J.; Hain, Roger; Hall, Diane M.; Miller, Joseph B.; Plummer, David A.; Zografou, Panagoula; Primini, Francis A.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Davis, John E.; Doe, Stephen M.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G., II; Grier, John D.; Harbo, Peter N.; He, Xiang Qun (Helen); Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Refsdal, Brian L.; Rots, Arnold H.; Siemiginowska, Aneta L.; Sundheim, Beth A.; Tibbetts, Michael S.; van Stone, David W.; Winkelman, Sherry L.

2009-09-01

Chandra Source Catalog processing recalibrates each observation using the latest available calibration data, and employs a wavelet-based source detection algorithm to identify all the X-ray sources in the field of view. Source properties are then extracted from each detected source that is a candidate for inclusion in the catalog. Catalog processing is completed by matching sources across multiple observations, merging common detections, and applying quality assurance checks. The Chandra Source Catalog processing system shares a common processing infrastructure and utilizes much of the functionality that is built into the Standard Data Processing (SDP) pipeline system that provides calibrated Chandra data to end-users. Other key components of the catalog processing system have been assembled from the portable CIAO data analysis package. Minimal new software tool development has been required to support the science algorithms needed for catalog production. Since processing pipelines must be instantiated for each detected source, the number of pipelines that are run during catalog construction is a factor of order 100 times larger than for SDP. The increased computational load, and inherent parallel nature of the processing, is handled by distributing the workload across a multi-node Beowulf cluster. Modifications to the SDP automated processing application to support catalog processing, and extensions to Chandra Data Archive software to ingest and retrieve catalog products, complete the upgrades to the infrastructure to support catalog processing.
Statistical Characterization of the Chandra Source Catalog

Science.gov (United States)

Primini, Francis A.; Houck, John C.; Davis, John E.; Nowak, Michael A.; Evans, Ian N.; Glotfelty, Kenny J.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G.; Grier, John D.; Hain, Roger M.; Hall, Diane M.; Harbo, Peter N.; He, Xiangqun Helen; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Plummer, David A.; Refsdal, Brian L.; Rots, Arnold H.; Siemiginowska, Aneta; Sundheim, Beth A.; Tibbetts, Michael S.; Van Stone, David W.; Winkelman, Sherry L.; Zografou, Panagoula

2011-06-01

The first release of the Chandra Source Catalog (CSC) contains ~95,000 X-ray sources in a total area of 0.75% of the entire sky, using data from ~3900 separate ACIS observations of a multitude of different types of X-ray sources. In order to maximize the scientific benefit of such a large, heterogeneous data set, careful characterization of the statistical properties of the catalog, i.e., completeness, sensitivity, false source rate, and accuracy of source properties, is required. Characterization efforts of other large Chandra catalogs, such as the ChaMP Point Source Catalog or the 2 Mega-second Deep Field Surveys, while informative, cannot serve this purpose, since the CSC analysis procedures are significantly different and the range of allowable data is much less restrictive. We describe here the characterization process for the CSC. This process includes both a comparison of real CSC results with those of other, deeper Chandra catalogs of the same targets and extensive simulations of blank-sky and point-source populations.
The Chandra Source Catalog: Storage and Interfaces

Science.gov (United States)

van Stone, David; Harbo, Peter N.; Tibbetts, Michael S.; Zografou, Panagoula; Evans, Ian N.; Primini, Francis A.; Glotfelty, Kenny J.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Davis, John E.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G., II; Grier, John D.; Hain, Roger; Hall, Diane M.; He, Xiang Qun (Helen); Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Plummer, David A.; Refsdal, Brian L.; Rots, Arnold H.; Siemiginowska, Aneta L.; Sundheim, Beth A.; Winkelman, Sherry L.

2009-09-01

The Chandra Source Catalog (CSC) is part of the Chandra Data Archive (CDA) at the Chandra X-ray Center. The catalog contains source properties and associated data objects such as images, spectra, and lightcurves. The source properties are stored in relational databases and the data objects are stored in files with their metadata stored in databases. The CDA supports different versions of the catalog: multiple fixed release versions and a live database version. There are several interfaces to the catalog: CSCview, a graphical interface for building and submitting queries and for retrieving data objects; a command-line interface for property and source searches using ADQL; and VO-compliant services discoverable though the VO registry. This poster describes the structure of the catalog and provides an overview of the interfaces.
STATISTICAL CHARACTERIZATION OF THE CHANDRA SOURCE CATALOG

International Nuclear Information System (INIS)

Primini, Francis A.; Evans, Ian N.; Glotfelty, Kenny J.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G.; Grier, John D.; Hain, Roger M.; Harbo, Peter N.; He Xiangqun; Karovska, Margarita; Houck, John C.; Davis, John E.; Nowak, Michael A.; Hall, Diane M.

2011-01-01

The first release of the Chandra Source Catalog (CSC) contains ∼95,000 X-ray sources in a total area of 0.75% of the entire sky, using data from ∼3900 separate ACIS observations of a multitude of different types of X-ray sources. In order to maximize the scientific benefit of such a large, heterogeneous data set, careful characterization of the statistical properties of the catalog, i.e., completeness, sensitivity, false source rate, and accuracy of source properties, is required. Characterization efforts of other large Chandra catalogs, such as the ChaMP Point Source Catalog or the 2 Mega-second Deep Field Surveys, while informative, cannot serve this purpose, since the CSC analysis procedures are significantly different and the range of allowable data is much less restrictive. We describe here the characterization process for the CSC. This process includes both a comparison of real CSC results with those of other, deeper Chandra catalogs of the same targets and extensive simulations of blank-sky and point-source populations.
The Chandra Source Catalog: Source Properties and Data Products

Science.gov (United States)

Rots, Arnold; Evans, Ian N.; Glotfelty, Kenny J.; Primini, Francis A.; Zografou, Panagoula; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Davis, John E.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G., II; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; He, Xiang Qun (Helen); Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Plummer, David A.; Refsdal, Brian L.; Siemiginowska, Aneta L.; Sundheim, Beth A.; Tibbetts, Michael S.; van Stone, David W.; Winkelman, Sherry L.

2009-09-01

The Chandra Source Catalog (CSC) is breaking new ground in several areas. There are two aspects that are of particular interest to the users: its evolution and its contents. The CSC will be a living catalog that becomes richer, bigger, and better in time while still remembering its state at each point in time. This means that users will be able to take full advantage of new additions to the catalog, while retaining the ability to back-track and return to what was extracted in the past. The CSC sheds the limitations of flat-table catalogs. Its sources will be characterized by a large number of properties, as usual, but each source will also be associated with its own specific data products, allowing users to perform mini custom analysis on the sources. Source properties fall in the spatial (position, extent), photometric (fluxes, count rates), spectral (hardness ratios, standard spectral fits), and temporal (variability probabilities) domains, and are all accompanied by error estimates. Data products cover the same coordinate space and include event lists, images, spectra, and light curves. In addition, the catalog contains data products covering complete observations: event lists, background images, exposure maps, etc. This work is supported by NASA contract NAS8-03060 (CXC).
Improved Point-source Detection in Crowded Fields Using Probabilistic Cataloging

Science.gov (United States)

Portillo, Stephen K. N.; Lee, Benjamin C. G.; Daylan, Tansu; Finkbeiner, Douglas P.

2017-10-01

Cataloging is challenging in crowded fields because sources are extremely covariant with their neighbors and blending makes even the number of sources ambiguous. We present the first optical probabilistic catalog, cataloging a crowded (˜0.1 sources per pixel brighter than 22nd mag in F606W) Sloan Digital Sky Survey r-band image from M2. Probabilistic cataloging returns an ensemble of catalogs inferred from the image and thus can capture source-source covariance and deblending ambiguities. By comparing to a traditional catalog of the same image and a Hubble Space Telescope catalog of the same region, we show that our catalog ensemble better recovers sources from the image. It goes more than a magnitude deeper than the traditional catalog while having a lower false-discovery rate brighter than 20th mag. We also present an algorithm for reducing this catalog ensemble to a condensed catalog that is similar to a traditional catalog, except that it explicitly marginalizes over source-source covariances and nuisance parameters. We show that this condensed catalog has a similar completeness and false-discovery rate to the catalog ensemble. Future telescopes will be more sensitive, and thus more of their images will be crowded. Probabilistic cataloging performs better than existing software in crowded fields and so should be considered when creating photometric pipelines in the Large Synoptic Survey Telescope era.
Version 1 of the Hubble Source Catalog

Science.gov (United States)

Whitmore, Bradley C.; Allam, Sahar S.; Budavári, Tamás; Casertano, Stefano; Downes, Ronald A.; Donaldson, Thomas; Fall, S. Michael; Lubow, Stephen H.; Quick, Lee; Strolger, Louis-Gregory; Wallace, Geoff; White, Richard L.

2016-06-01

The Hubble Source Catalog is designed to help optimize science from the Hubble Space Telescope (HST) by combining the tens of thousands of visit-based source lists in the Hubble Legacy Archive (HLA) into a single master catalog. Version 1 of the Hubble Source Catalog includes WFPC2, ACS/WFC, WFC3/UVIS, and WFC3/IR photometric data generated using SExtractor software to produce the individual source lists. The catalog includes roughly 80 million detections of 30 million objects involving 112 different detector/filter combinations, and about 160,000 HST exposures. Source lists from Data Release 8 of the HLA are matched using an algorithm developed by Budavári & Lubow. The mean photometric accuracy for the catalog as a whole is better than 0.10 mag, with relative accuracy as good as 0.02 mag in certain circumstances (e.g., bright isolated stars). The relative astrometric residuals are typically within 10 mas, with a value for the mode (I.e., most common value) of 2.3 mas. The absolute astrometric accuracy is better than 0''\\hspace{-0.5em}. 1 for most sources, but can be much larger for a fraction of fields that could not be matched to the PanSTARRS, SDSS, or 2MASS reference systems. In this paper we describe the database design with emphasis on those aspects that enable the users to fully exploit the catalog while avoiding common misunderstandings and potential pitfalls. We provide usage examples to illustrate some of the science capabilities and data quality characteristics, and briefly discuss plans for future improvements to the Hubble Source Catalog.
The Chandra Source Catalog: Statistical Characterization

Science.gov (United States)

Primini, Francis A.; Nowak, M. A.; Houck, J. C.; Davis, J. E.; Glotfelty, K. J.; Karovska, M.; Anderson, C. S.; Bonaventura, N. R.; Chen, J. C.; Doe, S. M.; Evans, I. N.; Evans, J. D.; Fabbiano, G.; Galle, E. C.; Gibbs, D. G., II; Grier, J. D.; Hain, R.; Hall, D. M.; Harbo, P. N.; He, X.; Lauer, J.; McCollough, M. L.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Nichols, J. S.; Plummer, D. A.; Refsdal, B. L.; Rots, A. H.; Siemiginowska, A. L.; Sundheim, B. A.; Tibbetts, M. S.; van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2009-09-01

The Chandra Source Catalog (CSC) will ultimately contain more than ˜250000 x-ray sources in a total area of ˜1% of the entire sky, using data from ˜10000 separate ACIS and HRC observations of a multitude of different types of x-ray sources (see Evans et al. this conference). In order to maximize the scientific benefit of such a large, heterogeneous dataset, careful characterization of the statistical properties of the catalog, i.e., completeness, sensitivity, false source rate, and accuracy of source properties, is required. Our Characterization efforts include both extensive simulations of blank-sky and point source datasets, and detailed comparisons of CSC results with those of other x-ray and optical catalogs. We present here a summary of our characterization results for CSC Release 1 and preliminary plans for future releases. This work is supported by NASA contract NAS8-03060 (CXC).
FERMI LARGE AREA TELESCOPE FIRST SOURCE CATALOG

International Nuclear Information System (INIS)

Abdo, A. A.; Ackermann, M.; Ajello, M.; Allafort, A.; Bechtol, K.; Berenji, B.; Blandford, R. D.; Bloom, E. D.; Antolini, E.; Bonamente, E.; Atwood, W. B.; Axelsson, M.; Baldini, L.; Bellazzini, R.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bisello, D.; Baughman, B. M.; Belli, F.

2010-01-01

We present a catalog of high-energy gamma-ray sources detected by the Large Area Telescope (LAT), the primary science instrument on the Fermi Gamma-ray Space Telescope (Fermi), during the first 11 months of the science phase of the mission, which began on 2008 August 4. The First Fermi-LAT catalog (1FGL) contains 1451 sources detected and characterized in the 100 MeV to 100 GeV range. Source detection was based on the average flux over the 11 month period, and the threshold likelihood Test Statistic is 25, corresponding to a significance of just over 4σ. The 1FGL catalog includes source location regions, defined in terms of elliptical fits to the 95% confidence regions and power-law spectral fits as well as flux measurements in five energy bands for each source. In addition, monthly light curves are provided. Using a protocol defined before launch we have tested for several populations of gamma-ray sources among the sources in the catalog. For individual LAT-detected sources we provide firm identifications or plausible associations with sources in other astronomical catalogs. Identifications are based on correlated variability with counterparts at other wavelengths, or on spin or orbital periodicity. For the catalogs and association criteria that we have selected, 630 of the sources are unassociated. Care was taken to characterize the sensitivity of the results to the model of interstellar diffuse gamma-ray emission used to model the bright foreground, with the result that 161 sources at low Galactic latitudes and toward bright local interstellar clouds are flagged as having properties that are strongly dependent on the model or as potentially being due to incorrectly modeled structure in the Galactic diffuse emission.
A JEM-X Catalog of X-ray Sources

DEFF Research Database (Denmark)

Westergaard, Niels Jørgen Stenfeldt

2009-01-01

. A search for weaker, persistent, sources has been done in deep mosaic images that have been produced with all available observations for a large number of sky regions. The two resulting catalogs hold 158 and 179 sources respectively, but the combined catalog consists of 209 sources. This catalog can...... be downloaded as a FITS binary table file with source information such as names, positions, and fluxes at the PoS web page for the conference....
Chandra Source Catalog: Background Determination and Source Detection

Science.gov (United States)

McCollough, Michael L.; Rots, A. H.; Primini, F. A.; Evans, I. N.; Glotfelty, K. J.; Hain, R.; Anderson, C. S.; Bonaventura, N. R.; Chen, J. C.; Davis, J. E.; Doe, S. M.; Evans, J. D.; Fabbiano, G.; Galle, E.; Gibbs, D. G.; Grier, J. D.; Hall, D. M.; Harbo, P. N.; He, X.; Houck, J. C.; Karovska, M.; Lauer, J.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Nichols, J. S.; Nowak, M. A.; Plummer, D. A.; Refsdal, B. L.; Siemiginowska, A. L.; Sundheim, B. A.; Tibbetts, M. S.; Van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2009-01-01

The Chandra Source Catalog (CSC) is a major project in which all of the pointed imaging observations taken by the Chandra X-Ray Observatory will used to generate the most extensive X-ray source catalog produced to date. Early in the development of the CSC it was recognized that the ability to estimate local background levels in an automated fashion would be critical for essential CSC tasks such as source detection, photometry, sensitivity estimates, and source characterization. We present a discussion of how such background maps are created directly from the Chandra data and how they are used in source detection. The general background for Chandra observations is rather smoothly varying, containing only low spatial frequency components. However, in the case of ACIS data, a high spatial frequency component is added that is due to the readout streaks of the CCD chips. We discuss how these components can be estimated reliably using the Chandra data and what limitations and caveats should be considered in their use. We will discuss the source detection algorithm used for the CSC and the effects of the background images on the detection results. We will also touch on some the Catalog Inclusion and Quality Assurance criteria applied to the source detection results. This work is supported by NASA contract NAS8-03060 (CXC).
VizieR Online Data Catalog: ChaMP X-ray point source catalog (Kim+, 2007)

Science.gov (United States)

Kim, M.; Kim, D.-W.; Wilkes, B. J.; Green, P. J.; Kim, E.; Anderson, C. S.; Barkhouse, W. A.; Evans, N. R.; Ivezic, Z.; Karovska, M.; Kashyap, V. L.; Lee, M. G.; Maksym, P.; Mossman, A. E.; Silverman, J. D.; Tananbaum, H. D.

2009-01-01

We present the Chandra Multiwavelength Project (ChaMP) X-ray point source catalog with ~6800 X-ray sources detected in 149 Chandra observations covering ~10deg2. The full ChaMP catalog sample is 7 times larger than the initial published ChaMP catalog. The exposure time of the fields in our sample ranges from 0.9 to 124ks, corresponding to a deepest X-ray flux limit of f0.5-8.0=9x10-16ergs/cm2/s. The ChaMP X-ray data have been uniformly reduced and analyzed with ChaMP-specific pipelines and then carefully validated by visual inspection. The ChaMP catalog includes X-ray photometric data in eight different energy bands as well as X-ray spectral hardness ratios and colors. To best utilize the ChaMP catalog, we also present the source reliability, detection probability, and positional uncertainty. (10 data files).
Chandra Source Catalog: User Interfaces

Science.gov (United States)

Bonaventura, Nina; Evans, I. N.; Harbo, P. N.; Rots, A. H.; Tibbetts, M. S.; Van Stone, D. W.; Zografou, P.; Anderson, C. S.; Chen, J. C.; Davis, J. E.; Doe, S. M.; Evans, J. D.; Fabbiano, G.; Galle, E.; Gibbs, D. G.; Glotfelty, K. J.; Grier, J. D.; Hain, R.; Hall, D. M.; He, X.; Houck, J. C.; Karovska, M.; Lauer, J.; McCollough, M. L.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Nichols, J. S.; Nowak, M. A.; Plummer, D. A.; Primini, F. A.; Refsdal, B. L.; Siemiginowska, A. L.; Sundheim, B. A.; Winkelman, S. L.

2010-03-01

The CSCview data mining interface is available for browsing the Chandra Source Catalog (CSC) and downloading tables of quality-assured source properties and data products. Once the desired source properties and search criteria are entered into the CSCview query form, the resulting source matches are returned in a table along with the values of the requested source properties for each source. (The catalog can be searched on any source property, not just position.) At this point, the table of search results may be saved to a text file, and the available data products for each source may be downloaded. CSCview save files are output in RDB-like and VOTable format. The available CSC data products include event files, spectra, lightcurves, and images, all of which are processed with the CIAO software. CSC data may also be accessed non-interactively with Unix command-line tools such as cURL and Wget, using ADQL 2.0 query syntax. In fact, CSCview features a separate ADQL query form for those who wish to specify this type of query within the GUI. Several interfaces are available for learning if a source is included in the catalog (in addition to CSCview): 1) the CSC interface to Sky in Google Earth shows the footprint of each Chandra observation on the sky, along with the CSC footprint for comparison (CSC source properties are also accessible when a source within a Chandra field-of-view is clicked); 2) the CSC Limiting Sensitivity online tool indicates if a source at an input celestial location was too faint for detection; 3) an IVOA Simple Cone Search interface locates all CSC sources within a specified radius of an R.A. and Dec.; and 4) the CSC-SDSS cross-match service returns the list of sources common to the CSC and SDSS, either all such sources or a subset based on search criteria.
The Chandra Source Catalog : Automated Source Correlation

Science.gov (United States)

Hain, Roger; Evans, I. N.; Evans, J. D.; Glotfelty, K. J.; Anderson, C. S.; Bonaventura, N. R.; Chen, J. C.; Davis, J. E.; Doe, S. M.; Fabbiano, G.; Galle, E.; Gibbs, D. G.; Grier, J. D.; Hall, D. M.; Harbo, P. N.; He, X.; Houck, J. C.; Karovska, M.; Lauer, J.; McCollough, M. L.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Nichols, J. S.; Nowak, M. A.; Plummer, D. A.; Primini, F. A.; Refsdal, B. L.; Rots, A. H.; Siemiginowska, A. L.; Sundheim, B. A.; Tibbetts, M. S.; Van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2009-01-01

Chandra Source Catalog (CSC) master source pipeline processing seeks to automatically detect sources and compute their properties. Since Chandra is a pointed mission and not a sky survey, different sky regions are observed for a different number of times at varying orientations, resolutions, and other heterogeneous conditions. While this provides an opportunity to collect data from a potentially large number of observing passes, it also creates challenges in determining the best way to combine different detection results for the most accurate characterization of the detected sources. The CSC master source pipeline correlates data from multiple observations by updating existing cataloged source information with new data from the same sky region as they become available. This process sometimes leads to relatively straightforward conclusions, such as when single sources from two observations are similar in size and position. Other observation results require more logic to combine, such as one observation finding a single, large source and another identifying multiple, smaller sources at the same position. We present examples of different overlapping source detections processed in the current version of the CSC master source pipeline. We explain how they are resolved into entries in the master source database, and examine the challenges of computing source properties for the same source detected multiple times. Future enhancements are also discussed. This work is supported by NASA contract NAS8-03060 (CXC).

The Chandra Source Catalog 2.0: Building The Catalog

Science.gov (United States)

Grier, John D.; Plummer, David A.; Allen, Christopher E.; Anderson, Craig S.; Budynkiewicz, Jamie A.; Burke, Douglas; Chen, Judy C.; Civano, Francesca Maria; D'Abrusco, Raffaele; Doe, Stephen M.; Evans, Ian N.; Evans, Janet D.; Fabbiano, Giuseppina; Gibbs, Danny G., II; Glotfelty, Kenny J.; Graessle, Dale E.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; Houck, John C.; Lauer, Jennifer L.; Laurino, Omar; Lee, Nicholas P.; Martínez-Galarza, Juan Rafael; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph; McLaughlin, Warren; Morgan, Douglas L.; Mossman, Amy E.; Nguyen, Dan T.; Nichols, Joy S.; Nowak, Michael A.; Paxson, Charles; Primini, Francis Anthony; Rots, Arnold H.; Siemiginowska, Aneta; Sundheim, Beth A.; Tibbetts, Michael; Van Stone, David W.; Zografou, Panagoula

2018-01-01

To build release 2.0 of the Chandra Source Catalog (CSC2), we require scientific software tools and processing pipelines to evaluate and analyze the data. Additionally, software and hardware infrastructure is needed to coordinate and distribute pipeline execution, manage data i/o, and handle data for Quality Assurance (QA) intervention. We also provide data product staging for archive ingestion.Release 2 utilizes a database driven system used for integration and production. Included are four distinct instances of the Automatic Processing (AP) system (Source Detection, Master Match, Source Properties and Convex Hulls) and a high performance computing (HPC) cluster that is managed to provide efficient catalog processing. In this poster we highlight the internal systems developed to meet the CSC2 challenge.This work has been supported by NASA under contract NAS 8-03060 to the Smithsonian Astrophysical Observatory for operation of the Chandra X-ray Center.
The Chandra Source Catalog 2.0: Interfaces

Science.gov (United States)

D'Abrusco, Raffaele; Zografou, Panagoula; Tibbetts, Michael; Allen, Christopher E.; Anderson, Craig S.; Budynkiewicz, Jamie A.; Burke, Douglas; Chen, Judy C.; Civano, Francesca Maria; Doe, Stephen M.; Evans, Ian N.; Evans, Janet D.; Fabbiano, Giuseppina; Gibbs, Danny G., II; Glotfelty, Kenny J.; Graessle, Dale E.; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; Houck, John C.; Lauer, Jennifer L.; Laurino, Omar; Lee, Nicholas P.; Martínez-Galarza, Rafael; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph; McLaughlin, Warren; Morgan, Douglas L.; Mossman, Amy E.; Nguyen, Dan T.; Nichols, Joy S.; Nowak, Michael A.; Paxson, Charles; Plummer, David A.; Primini, Francis Anthony; Rots, Arnold H.; Siemiginowska, Aneta; Sundheim, Beth A.; Van Stone, David W.

2018-01-01

Easy-to-use, powerful public interfaces to access the wealth of information contained in any modern, complex astronomical catalog are fundamental to encourage its usage. In this poster,I present the public interfaces of the second Chandra Source Catalog (CSC2). CSC2 is the most comprehensive catalog of X-ray sources detected by Chandra, thanks to the inclusion of Chandra observations public through the end of 2014 and to methodological advancements. CSC2 provides measured properties for a large number of sources that sample the X-ray sky at fainter levels than the previous versions of the CSC, thanks to the stacking of single overlapping observations within 1’ before source detection. Sources from stacks are then crossmatched, if multiple stacks cover the same area of the sky, to create a list of unique, optimal CSC2 sources. The properties of sources detected in each single stack and each single observation are also measured. The layered structure of the CSC2 catalog is mirrored in the organization of the CSC2 database, consisting of three tables containing all properties for the unique stacked sources (“Master Source”), single stack sources (“Stack Source”) and sources in any single observation (“Observation Source”). These tables contain estimates of the position, flags, extent, significances, fluxes, spectral properties and variability (and associated errors) for all classes of sources. The CSC2 also includes source region and full-field data products for all master sources, stack sources and observation sources: images, photon event lists, light curves and spectra.CSCview, the main interface to the CSC2 source properties and data products, is a GUI tool that allows to build queries based on the values of all properties contained in CSC2 tables, query the catalog, inspect the returned table of source properties, browse and download the associated data products. I will also introduce the suite of command-line interfaces to CSC2 that can be used in
The Chandra Source Catalog: Background Determination and Source Detection

Science.gov (United States)

McCollough, Michael; Rots, Arnold; Primini, Francis A.; Evans, Ian N.; Glotfelty, Kenny J.; Hain, Roger; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Davis, John E.; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Danny G. Gibbs, II; Grier, John D.; Hall, Diane M.; Harbo, Peter N.; He, Xiang Qun (Helen); Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Plummer, David A.; Refsdal, Brian L.; Siemiginowska, Aneta L.; Sundheim, Beth A.; Tibbetts, Michael S.; van Stone, David W.; Winkelman, Sherry L.; Zografou, Panagoula

2009-09-01

The Chandra Source Catalog (CSC) is a major project in which all of the pointed imaging observations taken by the Chandra X-Ray Observatory are used to generate one of the most extensive X-ray source catalog produced to date. Early in the development of the CSC it was recognized that the ability to estimate local background levels in an automated fashion would be critical for essential CSC tasks such as source detection, photometry, sensitivity estimates, and source characterization. We present a discussion of how such background maps are created directly from the Chandra data and how they are used in source detection. The general background for Chandra observations is rather smoothly varying, containing only low spatial frequency components. However, in the case of ACIS data, a high spatial frequency component is added that is due to the readout streaks of the CCD chips. We discuss how these components can be estimated reliably using the Chandra data and what limitations and caveats should be considered in their use. We will discuss the source detection algorithm used for the CSC and the effects of the background images on the detection results. We will also touch on some the Catalog Inclusion and Quality Assurance criteria applied to the source detection results. This work is supported by NASA contract NAS8-03060 (CXC).
A JEM-X catalog of X-ray sources

DEFF Research Database (Denmark)

Westergaard, Niels Jørgen Stenfeldt; Chenevez, Jerome; Lund, Niels

2007-01-01

The JEM-X catalog of X-ray sources presented here is based on detections in individual science windows with a sensitivity limit of about 10 mCrab (5-15 keV). It contains 127 sources and only those that can be identified from the existing reference catalog. The input data are taken from the, up...
VizieR Online Data Catalog: Hubble Source Catalog (V1 and V2) (Whitmore+, 2016)

Science.gov (United States)

Whitmore, B. C.; Allam, S. S.; Budavari, T.; Casertano, S.; Downes, R. A.; Donaldson, T.; Fall, S. M.; Lubow, S. H.; Quick, L.; Strolger, L.-G.; Wallace, G.; White, R. L.

2016-10-01

The HSC v1 contains members of the WFPC2, ACS/WFC, WFC3/UVIS and WFC3/IR Source Extractor source lists from HLA version DR8 (data release 8). The crossmatching process involves adjusting the relative astrometry of overlapping images so as to minimize positional offsets between closely aligned sources in different images. After correction, the astrometric residuals of crossmatched sources are significantly reduced, to typically less than 10mas. The relative astrometry is supported by using Pan-STARRS, SDSS, and 2MASS as the astrometric backbone for initial corrections. In addition, the catalog includes source nondetections. The crossmatching algorithms and the properties of the initial (Beta 0.1) catalog are described in Budavari & Lubow (2012ApJ...761..188B). The HSC v2 contains members of the WFPC2, ACS/WFC, WFC3/UVIS and WFC3/IR Source Extractor source lists from HLA version DR9.1 (data release 9.1). The crossmatching process involves adjusting the relative astrometry of overlapping images so as to minimize positional offsets between closely aligned sources in different images. After correction, the astrometric residuals of crossmatched sources are significantly reduced, to typically less than 10mas. The relative astrometry is supported by using Pan-STARRS, SDSS, and 2MASS as the astrometric backbone for initial corrections. In addition, the catalog includes source nondetections. The crossmatching algorithms and the properties of the initial (Beta 0.1) catalog are described in Budavari & Lubow (2012ApJ...761..188B). Hubble Source Catalog Acknowledgement: Based on observations made with the NASA/ESA Hubble Space Telescope, and obtained from the Hubble Legacy Archive, which is a collaboration between the Space Telescope Science Institute (STScI/NASA), the Space Telescope European Coordinating Facility (ST-ECF/ESAC/ESA) and the Canadian Astronomy Data Centre (CADC/NRC/CSA). (2 data files).
The Chandra Source Catalog 2.0: Estimating Source Fluxes

Science.gov (United States)

Primini, Francis Anthony; Allen, Christopher E.; Miller, Joseph; Anderson, Craig S.; Budynkiewicz, Jamie A.; Burke, Douglas; Chen, Judy C.; Civano, Francesca Maria; D'Abrusco, Raffaele; Doe, Stephen M.; Evans, Ian N.; Evans, Janet D.; Fabbiano, Giuseppina; Gibbs, Danny G., II; Glotfelty, Kenny J.; Graessle, Dale E.; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; Houck, John C.; Lauer, Jennifer L.; Laurino, Omar; Lee, Nicholas P.; Martínez-Galarza, Juan Rafael; McCollough, Michael L.; McDowell, Jonathan C.; McLaughlin, Warren; Morgan, Douglas L.; Mossman, Amy E.; Nguyen, Dan T.; Nichols, Joy S.; Nowak, Michael A.; Paxson, Charles; Plummer, David A.; Rots, Arnold H.; Siemiginowska, Aneta; Sundheim, Beth A.; Tibbetts, Michael; Van Stone, David W.; Zografou, Panagoula

2018-01-01

The Second Chandra Source Catalog (CSC2.0) will provide information on approximately 316,000 point or compact extended x-ray sources, derived from over 10,000 ACIS and HRC-I imaging observations available in the public archive at the end of 2014. As in the previous catalog release (CSC1.1), fluxes for these sources will be determined separately from source detection, using a Bayesian formalism that accounts for background, spatial resolution effects, and contamination from nearby sources. However, the CSC2.0 procedure differs from that used in CSC1.1 in three important aspects. First, for sources in crowded regions in which photometric apertures overlap, fluxes are determined jointly, using an extension of the CSC1.1 algorithm, as discussed in Primini & Kashyap (2014ApJ...796…24P). Second, an MCMC procedure is used to estimate marginalized posterior probability distributions for source fluxes. Finally, for sources observed in multiple observations, a Bayesian Blocks algorithm (Scargle, et al. 2013ApJ...764..167S) is used to group observations into blocks of constant source flux.In this poster we present details of the CSC2.0 photometry algorithms and illustrate their performance in actual CSC2.0 datasets.This work has been supported by NASA under contract NAS 8-03060 to the Smithsonian Astrophysical Observatory for operation of the Chandra X-ray Center.
Catalog of Federal Funding Sources for Watershed Protection

Data.gov (United States)

U.S. Environmental Protection Agency — Catalog of Federal Funding Sources for Watershed Protection Web site is a searchable database of financial assistance sources (grants, loans) available to fund a...
The Chandra Source Catalog: Spectral Properties

Science.gov (United States)

Doe, Stephen; Siemiginowska, Aneta L.; Refsdal, Brian L.; Evans, Ian N.; Anderson, Craig S.; Bonaventura, Nina R.; Chen, Judy C.; Davis, John E.; Evans, Janet D.; Fabbiano, Giuseppina; Galle, Elizabeth C.; Gibbs, Danny G., II; Glotfelty, Kenny J.; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; He, Xiang Qun (Helen); Houck, John C.; Karovska, Margarita; Kashyap, Vinay L.; Lauer, Jennifer; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph B.; Mitschang, Arik W.; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Nowak, Michael A.; Plummer, David A.; Primini, Francis A.; Rots, Arnold H.; Sundheim, Beth A.; Tibbetts, Michael S.; van Stone, David W.; Winkelman, Sherry L.; Zografou, Panagoula

2009-09-01

The first release of the Chandra Source Catalog (CSC) contains all sources identified from eight years' worth of publicly accessible observations. The vast majority of these sources have been observed with the ACIS detector and have spectral information in 0.5-7 keV energy range. Here we describe the methods used to automatically derive spectral properties for each source detected by the standard processing pipeline and included in the final CSC. Hardness ratios were calculated for each source between pairs of energy bands (soft, medium and hard) using the Bayesian algorithm (BEHR, Park et al. 2006). The sources with high signal to noise ratio (exceeding 150 net counts) were fit in Sherpa (the modeling and fitting application from the Chandra Interactive Analysis of Observations package, developed by the Chandra X-ray Center; see Freeman et al. 2001). Two models were fit to each source: an absorbed power law and a blackbody emission. The fitted parameter values for the power-law and blackbody models were included in the catalog with the calculated flux for each model. The CSC also provides the source energy flux computed from the normalizations of predefined power-law and black-body models needed to match the observed net X-ray counts. In addition, we provide access to data products for each source: a file with source spectrum, the background spectrum, and the spectral response of the detector. This work is supported by NASA contract NAS8-03060 (CXC).
A STATISTICAL APPROACH TO RECOGNIZING SOURCE CLASSES FOR UNASSOCIATED SOURCES IN THE FIRST FERMI-LAT CATALOG

Energy Technology Data Exchange (ETDEWEB)

Ackermann, M. [Deutsches Elektronen Synchrotron DESY, D-15738 Zeuthen (Germany); Ajello, M.; Allafort, A.; Berenji, B.; Blandford, R. D.; Bloom, E. D.; Borgland, A. W.; Buehler, R. [W. W. Hansen Experimental Physics Laboratory, Kavli Institute for Particle Astrophysics and Cosmology, Department of Physics and SLAC National Accelerator Laboratory, Stanford University, Stanford, CA 94305 (United States); Antolini, E.; Bonamente, E. [Istituto Nazionale di Fisica Nucleare, Sezione di Perugia, I-06123 Perugia (Italy); Baldini, L.; Bellazzini, R.; Bregeon, J. [Istituto Nazionale di Fisica Nucleare, Sezione di Pisa, I-56127 Pisa (Italy); Ballet, J. [Laboratoire AIM, CEA-IRFU/CNRS/Universite Paris Diderot, Service d' Astrophysique, CEA Saclay, 91191 Gif sur Yvette (France); Barbiellini, G. [Istituto Nazionale di Fisica Nucleare, Sezione di Trieste, I-34127 Trieste (Italy); Bastieri, D. [Istituto Nazionale di Fisica Nucleare, Sezione di Padova, I-35131 Padova (Italy); Bouvier, A. [Santa Cruz Institute for Particle Physics, Department of Physics and Department of Astronomy and Astrophysics, University of California at Santa Cruz, Santa Cruz, CA 95064 (United States); Brandt, T. J. [CNRS, IRAP, F-31028 Toulouse Cedex 4 (France); Brigida, M. [Dipartimento di Fisica ' M. Merlin' dell' Universita e del Politecnico di Bari, I-70126 Bari (Italy); Bruel, P., E-mail: monzani@slac.stanford.edu, E-mail: vilchez@cesr.fr, E-mail: salvetti@lambrate.inaf.it, E-mail: elizabeth.c.ferrara@nasa.gov [Laboratoire Leprince-Ringuet, Ecole polytechnique, CNRS/IN2P3, Palaiseau (France); and others

2012-07-01

The Fermi Large Area Telescope (LAT) First Source Catalog (1FGL) provided spatial, spectral, and temporal properties for a large number of {gamma}-ray sources using a uniform analysis method. After correlating with the most-complete catalogs of source types known to emit {gamma} rays, 630 of these sources are 'unassociated' (i.e., have no obvious counterparts at other wavelengths). Here, we employ two statistical analyses of the primary {gamma}-ray characteristics for these unassociated sources in an effort to correlate their {gamma}-ray properties with the active galactic nucleus (AGN) and pulsar populations in 1FGL. Based on the correlation results, we classify 221 AGN-like and 134 pulsar-like sources in the 1FGL unassociated sources. The results of these source 'classifications' appear to match the expected source distributions, especially at high Galactic latitudes. While useful for planning future multiwavelength follow-up observations, these analyses use limited inputs, and their predictions should not be considered equivalent to 'probable source classes' for these sources. We discuss multiwavelength results and catalog cross-correlations to date, and provide new source associations for 229 Fermi-LAT sources that had no association listed in the 1FGL catalog. By validating the source classifications against these new associations, we find that the new association matches the predicted source class in {approx}80% of the sources.
A STATISTICAL APPROACH TO RECOGNIZING SOURCE CLASSES FOR UNASSOCIATED SOURCES IN THE FIRST FERMI-LAT CATALOG

International Nuclear Information System (INIS)

Ackermann, M.; Ajello, M.; Allafort, A.; Berenji, B.; Blandford, R. D.; Bloom, E. D.; Borgland, A. W.; Buehler, R.; Antolini, E.; Bonamente, E.; Baldini, L.; Bellazzini, R.; Bregeon, J.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bouvier, A.; Brandt, T. J.; Brigida, M.; Bruel, P.

2012-01-01

The Fermi Large Area Telescope (LAT) First Source Catalog (1FGL) provided spatial, spectral, and temporal properties for a large number of γ-ray sources using a uniform analysis method. After correlating with the most-complete catalogs of source types known to emit γ rays, 630 of these sources are 'unassociated' (i.e., have no obvious counterparts at other wavelengths). Here, we employ two statistical analyses of the primary γ-ray characteristics for these unassociated sources in an effort to correlate their γ-ray properties with the active galactic nucleus (AGN) and pulsar populations in 1FGL. Based on the correlation results, we classify 221 AGN-like and 134 pulsar-like sources in the 1FGL unassociated sources. The results of these source 'classifications' appear to match the expected source distributions, especially at high Galactic latitudes. While useful for planning future multiwavelength follow-up observations, these analyses use limited inputs, and their predictions should not be considered equivalent to 'probable source classes' for these sources. We discuss multiwavelength results and catalog cross-correlations to date, and provide new source associations for 229 Fermi-LAT sources that had no association listed in the 1FGL catalog. By validating the source classifications against these new associations, we find that the new association matches the predicted source class in ∼80% of the sources.
A Catalog of MIPSGAL Disk and Ring Sources

Science.gov (United States)

2010-04-01

remaining 11 are identified only as IRAS sources with no additional information available, except perhaps Two Micron All Sky Survey ( 2MASS )9 data...correspondence to the 24/xm emission, and a negative result means either no 9 Most of the catalog sources have at least one 2MASS source within 5", often
Deep Galex Observations of the Coma Cluster: Source Catalog and Galaxy Counts

Science.gov (United States)

Hammer, D.; Hornschemeier, A. E.; Mobasher, B.; Miller, N.; Smith, R.; Arnouts, S.; Milliard, B.; Jenkins, L.

2010-01-01

We present a source catalog from deep 26 ks GALEX observations of the Coma cluster in the far-UV (FUV; 1530 Angstroms) and near-UV (NUV; 2310 Angstroms) wavebands. The observed field is centered 0.9 deg. (1.6 Mpc) south-west of the Coma core, and has full optical photometric coverage by SDSS and spectroscopic coverage to r-21. The catalog consists of 9700 galaxies with GALEX and SDSS photometry, including 242 spectroscopically-confirmed Coma member galaxies that range from giant spirals and elliptical galaxies to dwarf irregular and early-type galaxies. The full multi-wavelength catalog (cluster plus background galaxies) is 80% complete to NUV=23 and FUV=23.5, and has a limiting depth at NUV=24.5 and FUV=25.0 which corresponds to a star formation rate of 10(exp -3) solar mass yr(sup -1) at the distance of Coma. The GALEX images presented here are very deep and include detections of many resolved cluster members superposed on a dense field of unresolved background galaxies. This required a two-fold approach to generating a source catalog: we used a Bayesian deblending algorithm to measure faint and compact sources (using SDSS coordinates as a position prior), and used the GALEX pipeline catalog for bright and/or extended objects. We performed simulations to assess the importance of systematic effects (e.g. object blends, source confusion, Eddington Bias) that influence source detection and photometry when using both methods. The Bayesian deblending method roughly doubles the number of source detections and provides reliable photometry to a few magnitudes deeper than the GALEX pipeline catalog. This method is also free from source confusion over the UV magnitude range studied here: conversely, we estimate that the GALEX pipeline catalogs are confusion limited at NUV approximately 23 and FUV approximately 24. We have measured the total UV galaxy counts using our catalog and report a 50% excess of counts across FUV=22-23.5 and NUV=21.5-23 relative to previous GALEX
3FHL: The Third Catalog of Hard Fermi -LAT Sources

Energy Technology Data Exchange (ETDEWEB)

Ajello, M. [Department of Physics and Astronomy, Clemson University, Kinard Lab of Physics, Clemson, SC 29634-0978 (United States); Atwood, W. B. [Santa Cruz Institute for Particle Physics, Department of Physics and Department of Astronomy and Astrophysics, University of California at Santa Cruz, Santa Cruz, CA 95064 (United States); Baldini, L. [Università di Pisa and Istituto Nazionale di Fisica Nucleare, Sezione di Pisa I-56127 Pisa (Italy); Ballet, J. [Laboratoire AIM, CEA-IRFU/CNRS/Université Paris Diderot, Service d’Astrophysique, CEA Saclay, F-91191 Gif sur Yvette (France); Barbiellini, G. [Istituto Nazionale di Fisica Nucleare, Sezione di Trieste, I-34127 Trieste (Italy); Bastieri, D. [Istituto Nazionale di Fisica Nucleare, Sezione di Padova, I-35131 Padova (Italy); Bellazzini, R. [Istituto Nazionale di Fisica Nucleare, Sezione di Pisa, I-56127 Pisa (Italy); Bissaldi, E. [Dipartimento di Fisica “M. Merlin” dell’Università e del Politecnico di Bari, I-70126 Bari (Italy); Blandford, R. D.; Bloom, E. D. [W. W. Hansen Experimental Physics Laboratory, Kavli Institute for Particle Astrophysics and Cosmology, Department of Physics and SLAC National Accelerator Laboratory, Stanford University, Stanford, CA 94305 (United States); Bonino, R. [Istituto Nazionale di Fisica Nucleare, Sezione di Torino, I-10125 Torino (Italy); Bregeon, J. [Laboratoire Univers et Particules de Montpellier, Université Montpellier, CNRS/IN2P3, F-34095 Montpellier (France); Britto, R. J. [Department of Physics, University of the Free State, P.O. Box 339, Bloemfontein 9300 (South Africa); Bruel, P., E-mail: majello@slac.stanford.edu [Laboratoire Leprince-Ringuet, École polytechnique, CNRS/IN2P3, F-91128 Palaiseau (France); and others

2017-10-01

We present a catalog of sources detected above 10 GeV by the Fermi Large Area Telescope (LAT) in the first 7 years of data using the Pass 8 event-level analysis. This is the Third Catalog of Hard Fermi -LAT Sources (3FHL), containing 1556 objects characterized in the 10 GeV–2 TeV energy range. The sensitivity and angular resolution are improved by factors of 3 and 2 relative to the previous LAT catalog at the same energies (1FHL). The vast majority of detected sources (79%) are associated with extragalactic counterparts at other wavelengths, including 16 sources located at very high redshift ( z > 2). Of the sources, 8% have Galactic counterparts and 13% are unassociated (or associated with a source of unknown nature). The high-latitude sky and the Galactic plane are observed with a flux sensitivity of 4.4 to 9.5 × 10{sup −11} ph cm{sup −2} s{sup −1}, respectively (this is approximately 0.5% and 1% of the Crab Nebula flux above 10 GeV). The catalog includes 214 new γ -ray sources. The substantial increase in the number of photons (more than 4 times relative to 1FHL and 10 times to 2FHL) also allows us to measure significant spectral curvature for 32 sources and find flux variability for 163 of them. Furthermore, we estimate that for the same flux limit of 10{sup −12} erg cm{sup −2} s{sup −1}, the energy range above 10 GeV has twice as many sources as the range above 50 GeV, highlighting the importance, for future Cherenkov telescopes, of lowering the energy threshold as much as possible.
The first fermi-lat catalog of sources above 10 GeV

Energy Technology Data Exchange (ETDEWEB)

Ackermann, M.; Ajello, M.; Allafort, A.; Atwood, W. B.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Belfiore, A.; Bellazzini, R.; Bernieri, E.; Bissaldi, E.; Bloom, E. D.; Bonamente, E.; Brandt, T. J.; Bregeon, J.; Brigida, M.; Bruel, P.; Buehler, R.; Burnett, T. H.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Campana, R.; Caraveo, P. A.; Casandjian, J. M.; Cavazzuti, E.; Cecchi, C.; Charles, E.; Chaves, R. C. G.; Chekhtman, A.; Cheung, C. C.; Chiang, J.; Chiaro, G.; Ciprini, S.; Claus, R.; Cohen-Tanugi, J.; Cominsky, L. R.; Conrad, J.; Cutini, S.; D' Ammando, F.; de Angelis, A.; de Palma, F.; Dermer, C. D.; Desiante, R.; Digel, S. W.; Di Venere, L.; Drell, P. S.; Drlica-Wagner, A.; Favuzzi, C.; Fegan, S. J.; Ferrara, E. C.; Focke, W. B.; Fortin, P.; Franckowiak, A.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Gehrels, N.; Germani, S.; Giglietto, N.; Giommi, P.; Giordano, F.; Giroletti, M.; Godfrey, G.; Gomez-Vargas, G. A.; Grenier, I. A.; Guiriec, S.; Hadasch, D.; Hanabata, Y.; Harding, A. K.; Hayashida, M.; Hays, E.; Hewitt, J.; Hill, A. B.; Horan, D.; Hughes, R. E.; Jogler, T.; Jóhannesson, G.; Johnson, A. S.; Johnson, T. J.; Johnson, W. N.; Kamae, T.; Kataoka, J.; Kawano, T.; Knödlseder, J.; Kuss, M.; Lande, J.; Larsson, S.; Latronico, L.; Lemoine-Goumard, M.; Longo, F.; Loparco, F.; Lott, B.; Lovellette, M. N.; Lubrano, P.; Massaro, E.; Mayer, M.; Mazziotta, M. N.; McEnery, J. E.; Mehault, J.; Michelson, P. F.; Mizuno, T.; Moiseev, A. A.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Murgia, S.; Nemmen, R.; Nuss, E.; Ohsugi, T.; Okumura, A.; Orienti, M.; Ormes, J. F.; Paneque, D.; Perkins, J. S.; Pesce-Rollins, M.; Piron, F.; Pivato, G.; Porter, T. A.; Rainò, S.; Razzano, M.; Reimer, A.; Reimer, O.; Reposeur, T.; Ritz, S.; Romani, R. W.; Roth, M.; Saz Parkinson, P. M.; Schulz, A.; Sgrò, C.; Siskind, E. J.; Smith, D. A.; Spandre, G.; Spinelli, P.; Stawarz, Łukasz; Strong, A. W.; Suson, D. J.; Takahashi, H.; Thayer, J. G.; Thayer, J. B.; Thompson, D. J.; Tibaldo, L.; Tinivella, M.; Torres, D. F.; Tosti, G.; Troja, E.; Uchiyama, Y.; Usher, T. L.; Vandenbroucke, J.; Vasileiou, V.; Vianello, G.; Vitale, V.; Werner, M.; Winer, B. L.; Wood, K. S.; Wood, M.

2013-11-14

We present a catalog of gamma-ray sources at energies above 10 GeV based on data from the Large Area Telescope (LAT) accumulated during the first three years of the Fermi Gamma-ray Space Telescope mission. The first Fermi-LAT catalog of >10GeV sources (1FHL) has 514 sources. For each source we present location, spectrum, a measure of variability, and associations with cataloged sources at other wavelengths. We found that 449 (87%) could be associated with known sources, of which 393 (76% of the 1FHL sources) are active galactic nuclei. Of the 27 sources associated with known pulsars, we find 20 (12) to have significant pulsations in the range >10GeV (>25GeV). In this work we also report that, at energies above 10 GeV, unresolved sources account for 27+/-8 % of the isotropic gamma-ray background, while the unresolved Galactic population contributes only at the few percent level to the Galactic diffuse background. We also highlight the subset of the 1FHL sources that are best candidates for detection at energies above 50-100 GeV with current and future ground-based gamma-ray observatories.
A 1420 MHz Catalog of Compact Sources in the Northern Galactic Plane

Energy Technology Data Exchange (ETDEWEB)

Taylor, A. R. [Inter-University Institute for Data Intensive Astronomy, and Department of Astronomy, University of Cape Town Department of Physics, University of the Western Cape (South Africa); Leahy, D. A.; Sunstrum, C. [Department of Physics and Astronomy, University of Calgary (Canada); Tian, W. W. [National Astronomical Observatories, Chinese Academy of Sciences, Beijing Shi (China); Kothes, R.; Landecker, T. L.; Ransom, R. R; Higgs, L. A. [Dominion Radio Astrophysical Observatory, Herzberg Programs in Astronomy and Astrophysics National Research Council of Canada (Canada)

2017-03-01

We present a catalog of compact sources of radio emission at 1420 MHz in the northern Galactic plane from the Canadian Galactic Plane Survey. The catalog contains 72,758 compact sources with an angular size less than 3′ within the Galactic longitude range 52° < ℓ < 192° down to a 5 σ detection level of ∼1.2 mJy. Linear polarization properties are included for 12,368 sources with signals greater than 4 σ{sub QU} in the Canadian Galactic Plane Survey (CGPS) Stokes Q and U images at the position of the total intensity peak. We compare CGPS flux densities with cataloged flux densities in the Northern VLA Sky Survey catalog for 10,897 isolated unresolved sources with CGPS flux density greater than 4 mJy to search for sources that show variable flux density on timescales of several years. We identify 146 candidate variables that exhibit high fractional variations between the two surveys. In addition, we identify 13 candidate transient sources that have CGPS flux density above 10 mJy but are not detected in the Northern VLA Sky Survey.
DEEP GALEX OBSERVATIONS OF THE COMA CLUSTER: SOURCE CATALOG AND GALAXY COUNTS

International Nuclear Information System (INIS)

Hammer, D.; Hornschemeier, A. E.; Miller, N.; Jenkins, L.; Mobasher, B.; Smith, R.; Arnouts, S.; Milliard, B.

2010-01-01

We present a source catalog from a deep 26 ks Galaxy Evolution Explorer (GALEX) observation of the Coma cluster in the far-UV (FUV; 1530 A) and near-UV (NUV; 2310 A) wavebands. The observed field is centered ∼0. 0 9 (1.6 Mpc) southwest of the Coma core in a well-studied region of the cluster known as 'Coma-3'. The entire field is located within the apparent virial radius of the Coma cluster, and has optical photometric coverage with Sloan Digital Sky Survey (SDSS) and deep spectroscopic coverage to r ∼ 21. We detect GALEX sources to NUV = 24.5 and FUV = 25.0, which corresponds to a star formation rate of ∼10 -3 M sun yr -1 for galaxies at the distance of Coma. We have assembled a catalog of 9700 galaxies with GALEX and SDSS photometry, including 242 spectroscopically confirmed Coma member galaxies that span a large range of galaxy types from giant spirals and elliptical galaxies to dwarf irregular and early-type galaxies. The full multi-wavelength catalog (cluster plus background galaxies) is ∼80% complete to NUV = 23 and FUV = 23.5. The GALEX images presented here are very deep and include detections of many resolved cluster members superposed on a dense field of unresolved background galaxies. This required a two-fold approach to generating a source catalog: we used a Bayesian deblending algorithm to measure faint and compact sources (using SDSS coordinates as position prior), and used the GALEX pipeline catalog for bright and/or extended objects. We performed simulations to assess the importance of systematic effects (e.g., object blends, source confusion, Eddington Bias) that influence the source detection and photometry when using both methods. The Bayesian deblending method roughly doubles the number of source detections and provides reliable photometry to a few magnitudes deeper than the GALEX pipeline catalog. This method is free from source confusion over the UV magnitude range studied here; we estimate that the GALEX pipeline catalogs are
THE 37 MONTH MAXI/GSC SOURCE CATALOG OF THE HIGH GALACTIC-LATITUDE SKY

Energy Technology Data Exchange (ETDEWEB)

Hiroi, Kazuo; Ueda, Yoshihiro; Hayashida, Masaaki; Shidatsu, Megumi; Sato, Ryosuke; Kawamuro, Taiki [Department of Astronomy, Kyoto University, Oiwake-cho, Sakyo-ku, Kyoto 606-8502 (Japan); Sugizaki, Mutsumi; Serino, Motoko; Matsuoka, Masaru; Mihara, Tatehiro [Institute of Physical and Chemical Research (RIKEN), 2-1 Hirosawa, Wako, Saitama 351-0198 (Japan); Nakahira, Satoshi; Tomida, Hiroshi; Ueno, Shiro [ISS Science Project Office, Institute of Space and Astronautical Science (ISAS), Japan Aerospace Exploration Agency (JAXA), 2-1-1 Sengen, Tsukuba, Ibaraki 305-8505 (Japan); Kawai, Nobuyuki; Morii, Mikio [Department of Physics, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8551 (Japan); Nakajima, Motoki [School of Dentistry at Matsudo, Nihon University, 2-870-1 Sakaecho-nishi, Matsudo, Chiba 101-8308 (Japan); Negoro, Hitoshi [Department of Physics, Nihon University, 1-8-14 Kanda-Surugadai, Chiyoda-ku, Tokyo 101-8308 (Japan); Sakamoto, Takanori [Department of Physics and Mathematics, Aoyama Gakuin University, 5-10-1 Fuchinobe, Chuo-ku, Sagamihara, Kanagawa 252-5258 (Japan); Tsuboi, Yohko [Department of Physics, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo 112-8551 (Japan); Tsunemi, Hiroshi, E-mail: hiroi@kusastro.kyoto-u.ac.jp [Department of Earth and Space Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043 (Japan); and others

2013-08-15

We present a catalog of high Galactic-latitude (|b| > 10 Degree-Sign ) X-ray sources detected in the first 37 months of data of the Monitor of All-sky X-ray Image/Gas Slit Camera (MAXI/GSC). To achieve the best sensitivity, we develop a background model of the GSC that well reproduces the data based on the detailed on-board calibration. Source detection is performed through image fits with a Poisson likelihood algorithm. The catalog contains 500 objects detected with significances of s{sub D,4-10keV} {>=} 7 in the 4-10 keV band. The limiting sensitivity is Almost-Equal-To 7.5 Multiplication-Sign 10{sup -12} erg cm{sup -2} s{sup -1} ( Almost-Equal-To 0.6 mCrab) in the 4-10 keV band for 50% of the survey area, which is the highest ever achieved in an all-sky survey mission covering this energy band. We summarize the statistical properties of the catalog and results from cross matching with the Swift/BAT 70 month catalog, the meta-catalog of X-ray detected clusters of galaxies, and the MAXI/GSC 7 month catalog. Our catalog lists the source name (2MAXI), position and its error, detection significances and fluxes in the 4-10 keV and 3-4 keV bands, the hardness ratio, and the basic information of the likely counterpart available for 296 sources.
CHANDRA ACIS SURVEY OF X-RAY POINT SOURCES: THE SOURCE CATALOG

Energy Technology Data Exchange (ETDEWEB)

Wang, Song; Liu, Jifeng; Qiu, Yanli; Bai, Yu; Yang, Huiqin; Guo, Jincheng; Zhang, Peng, E-mail: jfliu@bao.ac.cn, E-mail: songw@bao.ac.cn [Key Laboratory of Optical Astronomy, National Astronomical Observatories, Chinese Academy of Sciences, Beijing 100012 (China)

2016-06-01

The Chandra archival data is a valuable resource for various studies on different X-ray astronomy topics. In this paper, we utilize this wealth of information and present a uniformly processed data set, which can be used to address a wide range of scientific questions. The data analysis procedures are applied to 10,029 Advanced CCD Imaging Spectrometer observations, which produces 363,530 source detections belonging to 217,828 distinct X-ray sources. This number is twice the size of the Chandra Source Catalog (Version 1.1). The catalogs in this paper provide abundant estimates of the detected X-ray source properties, including source positions, counts, colors, fluxes, luminosities, variability statistics, etc. Cross-correlation of these objects with galaxies shows that 17,828 sources are located within the D {sub 25} isophotes of 1110 galaxies, and 7504 sources are located between the D {sub 25} and 2 D {sub 25} isophotes of 910 galaxies. Contamination analysis with the log N –log S relation indicates that 51.3% of objects within 2 D {sub 25} isophotes are truly relevant to galaxies, and the “net” source fraction increases to 58.9%, 67.3%, and 69.1% for sources with luminosities above 10{sup 37}, 10{sup 38}, and 10{sup 39} erg s{sup −1}, respectively. Among the possible scientific uses of this catalog, we discuss the possibility of studying intra-observation variability, inter-observation variability, and supersoft sources (SSSs). About 17,092 detected sources above 10 counts are classified as variable in individual observation with the Kolmogorov–Smirnov (K–S) criterion ( P {sub K–S} < 0.01). There are 99,647 sources observed more than once and 11,843 sources observed 10 times or more, offering us a wealth of data with which to explore the long-term variability. There are 1638 individual objects (∼2350 detections) classified as SSSs. As a quite interesting subclass, detailed studies on X-ray spectra and optical spectroscopic follow-up are needed to
Improving Data Catalogs with Free and Open Source Software

Science.gov (United States)

Schweitzer, R.; Hankin, S.; O'Brien, K.

2013-12-01

The Global Earth Observation Integrated Data Environment (GEO-IDE) is NOAA's effort to successfully integrate data and information with partners in the national US-Global Earth Observation System (US-GEO) and the international Global Earth Observation System of Systems (GEOSS). As part of the GEO-IDE, the Unified Access Framework (UAF) is working to build momentum towards the goal of increased data integration and interoperability. The UAF project is moving towards this goal with an approach that includes leveraging well known and widely used standards, as well as free and open source software. The UAF project shares the widely held conviction that the use of data standards is a key ingredient necessary to achieve interoperability. Many community-based consensus standards fail, though, due to poor compliance. Compliance problems emerge for many reasons: because the standards evolve through versions, because documentation is ambiguous or because individual data providers find the standard inadequate as-is to meet their special needs. In addition, minimalist use of standards will lead to a compliant service, but one which is of low quality. In this presentation, we will be discussing the UAF effort to build a catalog cleaning tool which is designed to crawl THREDDS catalogs, analyze the data available, and then build a 'clean' catalog of data which is standards compliant and has a uniform set of data access services available. These data services include, among others, OPeNDAP, Web Coverage Service (WCS) and Web Mapping Service (WMS). We will also discuss how we are utilizing free and open source software and services to both crawl, analyze and build the clean data catalog, as well as our efforts to help data providers improve their data catalogs. We'll discuss the use of open source software such as DataNucleus, Thematic Realtime Environmental Distributed Data Services (THREDDS), ncISO and the netCDF Java Common Data Model (CDM). We'll also demonstrate how we are
The First Data Release of the All-sky NOAO Source Catalog

Science.gov (United States)

Nidever, David L.; NOAO Data Lab

2018-06-01

Roughly three quarters of the sky has been imaged with NOAO's telescopes from both hemispheres. While the large majority of these data were obtained for PI-led projects and surveys only a fraction have been released to the community via well-calibrated and easily accessible catalogs. We have remedied this by creating a catalog of sources from most of the public data taken on CTIO-4m+DECam as well as KPNO 4m+Mosaic3. The first data release (DR1) of this catalog, called the NOAO Source Catalog (NSC), contains 2.9 billion unique objects, 34 billion individual measurements, covers ~30,000 square degrees, has depths of ~23rd magnitude in most broadband filters with ~1-2% photometric accuracy and astrometric accuracy of ~2 mas. The NSC will be useful for exploring stellar streams, dwarf satellite galaxies, distant galaxies as well as variable stars and other transients. DR1 is now available through the NOAO Data Lab (datalab.noao.edu).

The Chandra Source Catalog: Algorithms

Science.gov (United States)

McDowell, Jonathan; Evans, I. N.; Primini, F. A.; Glotfelty, K. J.; McCollough, M. L.; Houck, J. C.; Nowak, M. A.; Karovska, M.; Davis, J. E.; Rots, A. H.; Siemiginowska, A. L.; Hain, R.; Evans, J. D.; Anderson, C. S.; Bonaventura, N. R.; Chen, J. C.; Doe, S. M.; Fabbiano, G.; Galle, E. C.; Gibbs, D. G., II; Grier, J. D.; Hall, D. M.; Harbo, P. N.; He, X.; Lauer, J.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Nichols, J. S.; Plummer, D. A.; Refsdal, B. L.; Sundheim, B. A.; Tibbetts, M. S.; van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2009-09-01

Creation of the Chandra Source Catalog (CSC) required adjustment of existing pipeline processing, adaptation of existing interactive analysis software for automated use, and development of entirely new algorithms. Data calibration was based on the existing pipeline, but more rigorous data cleaning was applied and the latest calibration data products were used. For source detection, a local background map was created including the effects of ACIS source readout streaks. The existing wavelet source detection algorithm was modified and a set of post-processing scripts used to correct the results. To analyse the source properties we ran the SAO Traceray trace code for each source to generate a model point spread function, allowing us to find encircled energy correction factors and estimate source extent. Further algorithms were developed to characterize the spectral, spatial and temporal properties of the sources and to estimate the confidence intervals on count rates and fluxes. Finally, sources detected in multiple observations were matched, and best estimates of their merged properties derived. In this paper we present an overview of the algorithms used, with more detailed treatment of some of the newly developed algorithms presented in companion papers.
Hubble Space Telescope: a Vision to 2020 and Beyond: The Hubble Source Catalog

Science.gov (United States)

Strolger, Louis-Gregory

2016-01-01

The Hubble Source Catalog (HSC) is an initiative centered on what science would be enabled by a master catalog of all the sources HST has imaged over its lifetime. The first version of this catalog was released in early 2015, and included approximately 30 million sources from archived direct imaging with WFPC2, ACS (through 2011), and WFC3 (to 2014). Version 2, scheduled for release in early 2016, will feed off the Hubble Legacy Archive DR9 release, updating the ACS sources with more detections, and more direct imaging, through to mid-2015. This talk will overview the properties and goals of the HSC in terms of its source detection, object resolution, confusion limits, and overall astrometric and photometric precision. I will also discuss the connections to other MAST activities (e.g., the Discovery Portal interface), to STScI and user products (e.g., the Spectroscopic Catalog and High-Level Science Products), and to community resources (e.g., Pan-STARRS, SDSS, and eventually GAIA). The HSC successfully amalgamates the diverse observations with HST, and despite the limitations in uniformity on the sky, will be an important reference for JWST, LSST, and other future telescopes.
VizieR Online Data Catalog: The Chandra Source Catalog, Release 1.1 (Evans+ 2012)

Science.gov (United States)

Evans, I. N.; Primini, F. A.; Glotfelty, C. S.; Anderson, C. S.; Bonaventura, N. R.; Chen, J. C.; Davis, J. E.; Doe, S. M.; Evans, J. D.; Fabbiano, G.; Galle, E. C.; Gibbs, D. G.; Grier, J. D.; Hain, R. M.; Hall, D. M.; Harbo, P. N.; He, X.; Houck, J. C.; Karovska, M.; Kashyap, V. L.; Lauer, J.; McCollough, M. L.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Mossman, A. E.; Nichols, J. S.; Nowak, M. A.; Plummer, D. A.; Refsdal, B. L.; Rots, A. H.; Siemiginowska, A.; Sundheim, B. A.; Tibbetts, M. S.; van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2014-01-01

This version of the catalog is release 1.1. It includes the information contained in release 1.0.1, plus point and compact source data extracted from HRC imaging observations, and catch-up ACIS observations released publicly prior to the end of 2009. (1 data file).
File list: Unc.PSC.50.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.50.AllAg.iPSC_intermediates mm9 Unclassified Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.50.AllAg.iPSC_intermediates.bed ...
File list: Pol.PSC.10.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.10.AllAg.iPSC_intermediates mm9 RNA polymerase Pluripotent stem cell iPSC intermediates...e.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.10.AllAg.iPSC_intermediates.bed ...
File list: Unc.PSC.20.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.20.AllAg.iPSC_intermediates mm9 Unclassified Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.20.AllAg.iPSC_intermediates.bed ...
File list: Pol.PSC.05.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.05.AllAg.iPSC_intermediates mm9 RNA polymerase Pluripotent stem cell iPSC intermediates...e.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.05.AllAg.iPSC_intermediates.bed ...
File list: Pol.PSC.20.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.20.AllAg.iPSC_intermediates mm9 RNA polymerase Pluripotent stem cell iPSC intermediates...e.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.20.AllAg.iPSC_intermediates.bed ...
File list: Unc.PSC.10.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.10.AllAg.iPSC_intermediates mm9 Unclassified Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.10.AllAg.iPSC_intermediates.bed ...
File list: Pol.PSC.50.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.50.AllAg.iPSC_intermediates mm9 RNA polymerase Pluripotent stem cell iPSC intermediates...e.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.50.AllAg.iPSC_intermediates.bed ...
File list: Unc.PSC.05.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.05.AllAg.iPSC_intermediates mm9 Unclassified Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.05.AllAg.iPSC_intermediates.bed ...
File list: DNS.PSC.20.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.20.AllAg.iPSC_intermediates mm9 DNase-seq Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.20.AllAg.iPSC_intermediates.bed ...
File list: DNS.PSC.10.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.10.AllAg.iPSC_intermediates mm9 DNase-seq Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.10.AllAg.iPSC_intermediates.bed ...
File list: DNS.PSC.05.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.05.AllAg.iPSC_intermediates mm9 DNase-seq Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.05.AllAg.iPSC_intermediates.bed ...
The Chandra Source Catalog: Source Variability

Science.gov (United States)

Nowak, Michael; Rots, A. H.; McCollough, M. L.; Primini, F. A.; Glotfelty, K. J.; Bonaventura, N. R.; Chen, J. C.; Davis, J. E.; Doe, S. M.; Evans, J. D.; Evans, I.; Fabbiano, G.; Galle, E. C.; Gibbs, D. G., II; Grier, J. D.; Hain, R.; Hall, D. M.; Harbo, P. N.; He, X.; Houck, J. C.; Karovska, M.; Lauer, J.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Nichols, J. S.; Plummer, D. A.; Refsdal, B. L.; Siemiginowska, A. L.; Sundheim, B. A.; Tibbetts, M. S.; van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2009-09-01

The Chandra Source Catalog (CSC) contains fields of view that have been studied with individual, uninterrupted observations that span integration times ranging from 1 ksec to 160 ksec, and a large number of which have received (multiple) repeat observations days to years later. The CSC thus offers an unprecedented look at the variability of the X-ray sky over a broad range of time scales, and across a wide diversity of variable X-ray sources: stars in the local galactic neighborhood, galactic and extragalactic X-ray binaries, Active Galactic Nuclei, etc. Here we describe the methods used to identify and quantify source variability within a single observation, and the methods used to assess the variability of a source when detected in multiple, individual observations. Three tests are used to detect source variability within a single observation: the Kolmogorov-Smirnov test and its variant, the Kuiper test, and a Bayesian approach originally suggested by Gregory and Loredo. The latter test not only provides an indicator of variability, but is also used to create a best estimate of the variable lightcurve shape. We assess the performance of these tests via simulation of statistically stationary, variable processes with arbitrary input power spectral densities (here we concentrate on results of red noise simulations) at variety of mean count rates and fractional root mean square variabilities relevant to CSC sources. We also assess the false positive rate via simulations of constant sources whose sole source of fluctuation is Poisson noise. We compare these simulations to an assessment of the variability found in real CSC sources, and estimate the variability sensitivities of the CSC.
THE FIRST FERMI-LAT CATALOG OF SOURCES ABOVE 10 GeV

International Nuclear Information System (INIS)

Ackermann, M.; Buehler, R.; Ajello, M.; Allafort, A.; Bechtol, K.; Bloom, E. D.; Atwood, W. B.; Belfiore, A.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bellazzini, R.; Bregeon, J.; Bernieri, E.; Bissaldi, E.; Bonamente, E.; Brandt, T. J.; M. Merlin dell'Università e del Politecnico di Bari, I-70126 Bari (Italy))" data-affiliation=" (Dipartimento di Fisica M. Merlin dell'Università e del Politecnico di Bari, I-70126 Bari (Italy))" >Brigida, M.; Bruel, P.

2013-01-01

We present a catalog of γ-ray sources at energies above 10 GeV based on data from the Large Area Telescope (LAT) accumulated during the first 3 yr of the Fermi Gamma-ray Space Telescope mission. The first Fermi-LAT catalog of >10 GeV sources (1FHL) has 514 sources. For each source we present location, spectrum, a measure of variability, and associations with cataloged sources at other wavelengths. We found that 449 (87%) could be associated with known sources, of which 393 (76% of the 1FHL sources) are active galactic nuclei. Of the 27 sources associated with known pulsars, we find 20 (12) to have significant pulsations in the range >10 GeV (>25 GeV). In this work we also report that, at energies above 10 GeV, unresolved sources account for 27% ± 8% of the isotropic γ-ray background, while the unresolved Galactic population contributes only at the few percent level to the Galactic diffuse background. We also highlight the subset of the 1FHL sources that are best candidates for detection at energies above 50-100 GeV with current and future ground-based γ-ray observatories
The Herschel Virgo Cluster Survey. XVII. SPIRE point-source catalogs and number counts

Science.gov (United States)

Pappalardo, Ciro; Bendo, George J.; Bianchi, Simone; Hunt, Leslie; Zibetti, Stefano; Corbelli, Edvige; di Serego Alighieri, Sperello; Grossi, Marco; Davies, Jonathan; Baes, Maarten; De Looze, Ilse; Fritz, Jacopo; Pohlen, Michael; Smith, Matthew W. L.; Verstappen, Joris; Boquien, Médéric; Boselli, Alessandro; Cortese, Luca; Hughes, Thomas; Viaene, Sebastien; Bizzocchi, Luca; Clemens, Marcel

2015-01-01

Aims: We present three independent catalogs of point-sources extracted from SPIRE images at 250, 350, and 500 μm, acquired with the Herschel Space Observatory as a part of the Herschel Virgo Cluster Survey (HeViCS). The catalogs have been cross-correlated to consistently extract the photometry at SPIRE wavelengths for each object. Methods: Sources have been detected using an iterative loop. The source positions are determined by estimating the likelihood to be a real source for each peak on the maps, according to the criterion defined in the sourceExtractorSussextractor task. The flux densities are estimated using the sourceExtractorTimeline, a timeline-based point source fitter that also determines the fitting procedure with the width of the Gaussian that best reproduces the source considered. Afterwards, each source is subtracted from the maps, removing a Gaussian function in every position with the full width half maximum equal to that estimated in sourceExtractorTimeline. This procedure improves the robustness of our algorithm in terms of source identification. We calculate the completeness and the flux accuracy by injecting artificial sources in the timeline and estimate the reliability of the catalog using a permutation method. Results: The HeViCS catalogs contain about 52 000, 42 200, and 18 700 sources selected at 250, 350, and 500 μm above 3σ and are ~75%, 62%, and 50% complete at flux densities of 20 mJy at 250, 350, 500 μm, respectively. We then measured source number counts at 250, 350, and 500 μm and compare them with previous data and semi-analytical models. We also cross-correlated the catalogs with the Sloan Digital Sky Survey to investigate the redshift distribution of the nearby sources. From this cross-correlation, we select ~2000 sources with reliable fluxes and a high signal-to-noise ratio, finding an average redshift z ~ 0.3 ± 0.22 and 0.25 (16-84 percentile). Conclusions: The number counts at 250, 350, and 500 μm show an increase in
File list: Oth.PSC.20.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.20.AllAg.iPSC_intermediates mm9 TFs and others Pluripotent stem cell iPSC intermediates...7379,SRX977371,SRX977370,SRX897943,SRX1184107,SRX897941 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.20.AllAg.iPSC_intermediates.bed ...
File list: Oth.PSC.05.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.05.AllAg.iPSC_intermediates mm9 TFs and others Pluripotent stem cell iPSC intermediates...7367,SRX977374,SRX897943,SRX977378,SRX1184107,SRX897941 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.05.AllAg.iPSC_intermediates.bed ...
File list: Oth.PSC.10.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.10.AllAg.iPSC_intermediates mm9 TFs and others Pluripotent stem cell iPSC intermediates...7378,SRX897943,SRX977370,SRX977371,SRX1184107,SRX897941 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.10.AllAg.iPSC_intermediates.bed ...

File list: Oth.PSC.50.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.50.AllAg.iPSC_intermediates mm9 TFs and others Pluripotent stem cell iPSC intermediates...7379,SRX977371,SRX977370,SRX897943,SRX897941,SRX1184107 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.50.AllAg.iPSC_intermediates.bed ...
File list: ALL.PSC.10.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.10.AllAg.iPSC_intermediates mm9 All antigens Pluripotent stem cell iPSC intermediates...,SRX1178446,SRX1178449,SRX1178447,SRX897944,SRX1090865,SRX684777,SRX1090866 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.10.AllAg.iPSC_intermediates.bed ...
File list: ALL.PSC.50.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.50.AllAg.iPSC_intermediates mm9 All antigens Pluripotent stem cell iPSC intermediates...44,SRX897944,SRX1178447,SRX684776,SRX684778,SRX684777,SRX1090865,SRX1090866 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.50.AllAg.iPSC_intermediates.bed ...
File list: ALL.PSC.05.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.05.AllAg.iPSC_intermediates mm9 All antigens Pluripotent stem cell iPSC intermediates...6,SRX1184108,SRX897944,SRX1178447,SRX684778,SRX684777,SRX1090865,SRX1090866 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.05.AllAg.iPSC_intermediates.bed ...
File list: ALL.PSC.20.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.20.AllAg.iPSC_intermediates mm9 All antigens Pluripotent stem cell iPSC intermediates...4,SRX1184108,SRX897944,SRX1178447,SRX684778,SRX1090865,SRX684777,SRX1090866 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.20.AllAg.iPSC_intermediates.bed ...
File list: NoD.PSC.05.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.05.AllAg.iPSC_intermediates mm9 No description Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.05.AllAg.iPSC_intermediates.bed ...
File list: NoD.PSC.10.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.10.AllAg.iPSC_intermediates mm9 No description Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.10.AllAg.iPSC_intermediates.bed ...
File list: NoD.PSC.20.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.20.AllAg.iPSC_intermediates mm9 No description Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.20.AllAg.iPSC_intermediates.bed ...
File list: NoD.PSC.50.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.50.AllAg.iPSC_intermediates mm9 No description Pluripotent stem cell iPSC intermediates... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.50.AllAg.iPSC_intermediates.bed ...
A 24 μm point source catalog of the galactic plane from Spitzer/MIPSGAL

Energy Technology Data Exchange (ETDEWEB)

Gutermuth, Robert A.; Heyer, Mark [Department of Astronomy, University of Massachusetts, Amherst, MA 01003 (United States)

2015-02-01

In this contribution, we describe the applied methods to construct a 24 μm based point source catalog derived from the image data of the MIPSGAL 24 μm Galactic Plane Survey and the corresponding data products. The high quality catalog product contains 933,818 sources, with a total of 1,353,228 in the full archive catalog. The source tables include positional and photometric information derived from the 24 μm images, source quality and confusion flags, and counterpart photometry from matched 2MASS, GLIMPSE, and WISE point sources. Completeness decay data cubes are constructed at 1′ angular resolution that describe the varying background levels over the MIPSGAL field and the ability to extract sources of a given magnitude from this background. The completeness decay cubes are included in the set of data products. We present the results of our efforts to verify the astrometric and photometric calibration of the catalog, and present several analyses of minor anomalies in these measurements to justify adopted mitigation strategies.
MOTION VERIFIED RED STARS (MoVeRS): A CATALOG OF PROPER MOTION SELECTED LOW-MASS STARS FROM WISE, SDSS, AND 2MASS

Energy Technology Data Exchange (ETDEWEB)

Theissen, Christopher A.; West, Andrew A. [Department of Astronomy, Boston University, 725 Commonwealth Avenue, Boston, MA 02215 (United States); Dhital, Saurav, E-mail: ctheisse@bu.edu [Department of Physical Sciences, Embry-Riddle Aeronautical University, 600 South Clyde Morris Blvd., Daytona Beach, FL 32114 (United States)

2016-02-15

We present a photometric catalog of 8,735,004 proper motion selected low-mass stars (KML-spectral types) within the Sloan Digital Sky Survey (SDSS) footprint, from the combined SDSS Data Release 10 (DR10), Two Micron All-Sky Survey (2MASS) point-source catalog (PSC), and Wide-field Infrared Survey Explorer (WISE) AllWISE catalog. Stars were selected using r − i, i − z, r − z, z − J, and z − W1 colors, and SDSS, WISE, and 2MASS astrometry was combined to compute proper motions. The resulting 3,518,150 stars were augmented with proper motions for 5,216,854 earlier type stars from the combined SDSS and United States Naval Observatory B1.0 catalog (USNO-B). We used SDSS+USNO-B proper motions to determine the best criteria for selecting a clean sample of stars. Only stars whose proper motions were greater than their 2σ uncertainty were included. Our Motion Verified Red Stars catalog is available through SDSS CasJobs and VizieR.
HERschel key program heritage: A far-infrared source catalog for the Magellanic Clouds

International Nuclear Information System (INIS)

Seale, Jonathan P.; Meixner, Margaret; Sewiło, Marta; Babler, Brian; Engelbracht, Charles W.; Misselt, Karl; Montiel, Edward; Gordon, Karl; Roman-Duval, Julia; Hony, Sacha; Okumura, Koryo; Panuzzo, Pasquale; Sauvage, Marc; Boyer, Martha L.; Chen, C.-H. Rosie; Indebetouw, Remy; Matsuura, Mikako; Oliveira, Joana M.; Loon, Jacco Th. van; Srinivasan, Sundar

2014-01-01

Observations from the HERschel Inventory of the Agents of Galaxy Evolution (HERITAGE) have been used to identify dusty populations of sources in the Large and Small Magellanic Clouds (LMC and SMC). We conducted the study using the HERITAGE catalogs of point sources available from the Herschel Science Center from both the Photodetector Array Camera and Spectrometer (PACS; 100 and 160 μm) and Spectral and Photometric Imaging Receiver (SPIRE; 250, 350, and 500 μm) cameras. These catalogs are matched to each other to create a Herschel band-merged catalog and then further matched to archival Spitzer IRAC and MIPS catalogs from the Spitzer Surveying the Agents of Galaxy Evolution (SAGE) and SAGE-SMC surveys to create single mid- to far-infrared (far-IR) point source catalogs that span the wavelength range from 3.6 to 500 μm. There are 35,322 unique sources in the LMC and 7503 in the SMC. To be bright in the FIR, a source must be very dusty, and so the sources in the HERITAGE catalogs represent the dustiest populations of sources. The brightest HERITAGE sources are dominated by young stellar objects (YSOs), and the dimmest by background galaxies. We identify the sources most likely to be background galaxies by first considering their morphology (distant galaxies are point-like at the resolution of Herschel) and then comparing the flux distribution to that of the Herschel Astrophysical Terahertz Large Area Survey (ATLAS) survey of galaxies. We find a total of 9745 background galaxy candidates in the LMC HERITAGE images and 5111 in the SMC images, in agreement with the number predicted by extrapolating from the ATLAS flux distribution. The majority of the Magellanic Cloud-residing sources are either very young, embedded forming stars or dusty clumps of the interstellar medium. Using the presence of 24 μm emission as a tracer of star formation, we identify 3518 YSO candidates in the LMC and 663 in the SMC. There are far fewer far-IR bright YSOs in the SMC than the LMC
HERschel key program heritage: A far-infrared source catalog for the Magellanic Clouds

Energy Technology Data Exchange (ETDEWEB)

Seale, Jonathan P.; Meixner, Margaret; Sewiło, Marta [The Johns Hopkins University, Department of Physics and Astronomy, 366 Bloomberg Center, 3400 N. Charles Street, Baltimore, MD 21218 (United States); Babler, Brian [Department of Astronomy, 475 North Charter St., University of Wisconsin, Madison, WI 53706 (United States); Engelbracht, Charles W.; Misselt, Karl; Montiel, Edward [Steward Observatory, University of Arizona, 933 North Cherry Ave., Tucson, AZ 85721 (United States); Gordon, Karl; Roman-Duval, Julia [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218 (United States); Hony, Sacha; Okumura, Koryo; Panuzzo, Pasquale; Sauvage, Marc [CEA, Laboratoire AIM, Irfu/SAp, Orme des Merisiers, F-91191 Gif-sur-Yvette (France); Boyer, Martha L. [Observational Cosmology Laboratory, Code 665, NASA Goddard Space Flight Center, Greenbelt, MD 20771 (United States); Chen, C.-H. Rosie [Max-Planck-Institut für Radioastronomie, Auf dem Hügel 69, D-53121 Bonn (Germany); Indebetouw, Remy [National Radio Astronomy Observatory, 520 Edgemont Road Charlottesville, VA 22903 (United States); Matsuura, Mikako [Department of Physics and Astronomy, University College London, Gower Street, London WC1E 6BT (United Kingdom); Oliveira, Joana M.; Loon, Jacco Th. van [School of Physical and Geographical Sciences, Lennard-Jones Laboratories, Keele University, Staffordshire ST5 5BG (United Kingdom); Srinivasan, Sundar [UPMC-CNRS UMR7095, Institute d' Astrophysique de Paris, F-75014 Paris (France); and others

2014-12-01

Observations from the HERschel Inventory of the Agents of Galaxy Evolution (HERITAGE) have been used to identify dusty populations of sources in the Large and Small Magellanic Clouds (LMC and SMC). We conducted the study using the HERITAGE catalogs of point sources available from the Herschel Science Center from both the Photodetector Array Camera and Spectrometer (PACS; 100 and 160 μm) and Spectral and Photometric Imaging Receiver (SPIRE; 250, 350, and 500 μm) cameras. These catalogs are matched to each other to create a Herschel band-merged catalog and then further matched to archival Spitzer IRAC and MIPS catalogs from the Spitzer Surveying the Agents of Galaxy Evolution (SAGE) and SAGE-SMC surveys to create single mid- to far-infrared (far-IR) point source catalogs that span the wavelength range from 3.6 to 500 μm. There are 35,322 unique sources in the LMC and 7503 in the SMC. To be bright in the FIR, a source must be very dusty, and so the sources in the HERITAGE catalogs represent the dustiest populations of sources. The brightest HERITAGE sources are dominated by young stellar objects (YSOs), and the dimmest by background galaxies. We identify the sources most likely to be background galaxies by first considering their morphology (distant galaxies are point-like at the resolution of Herschel) and then comparing the flux distribution to that of the Herschel Astrophysical Terahertz Large Area Survey (ATLAS) survey of galaxies. We find a total of 9745 background galaxy candidates in the LMC HERITAGE images and 5111 in the SMC images, in agreement with the number predicted by extrapolating from the ATLAS flux distribution. The majority of the Magellanic Cloud-residing sources are either very young, embedded forming stars or dusty clumps of the interstellar medium. Using the presence of 24 μm emission as a tracer of star formation, we identify 3518 YSO candidates in the LMC and 663 in the SMC. There are far fewer far-IR bright YSOs in the SMC than the LMC
VizieR Online Data Catalog: Fermi LAT second source catalog (2FGL) (Nolan+, 2012)

Science.gov (United States)

Nolan, P. L.; Abdo, A. A.; Ackermann, M.; Ajello, M.; Allafort, A.; Antolini, E.; Atwood, W. B.; Axelsson, M.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Bechtol, K.; Belfiore, A.; Bellazzini, R.; Berenji, B.; Bignami, G. F.; Blandford, R. D.; Bloom, E. D.; Bonamente, E.; Bonnell, J.; Borgland, A. W.; Bottacini, E.; Bouvier, A.; Brandt, T. J.; Bregeon, J.; Brigida, M.; Bruel, P.; Buehler, R.; Burnett, T. H.; Buson, S.; Caliandro, G. A.; Cameron, R. A.; Campana, R.; Canadas, B.; Cannon, A.; Caraveo, P. A.; Casandjian, J. M.; Cavazzuti, E.; Ceccanti, M.; Cecchi, C.; Celik, O.; Charles, E.; Chekhtman, A.; Cheung, C. C.; Chiang, J.; Chipaux, R.; Ciprini, S.; Claus, R.; Cohen-Tanugi, J.; Cominsky, L. R.; Conrad, J.; Corbet, R.; Cutini, S.; D'Ammando, F.; Davis, D. S.; de Angelis, A.; Decesar, M. E.; Deklotz, M.; de Luca A.; den Hartog, P. R.; de Palma, F.; Dermer, C. D.; Digel, S. W.; Do Couto, E. Silva E.; Drell, P. S.; Drlica-Wagner, A.; Dubois, R.; Dumora, D.; Enoto, T.; Escande, L.; Fabiani, D.; Falletti, L.; Favuzzi, C.; Fegan, S. J.; Ferrara, E. C.; Focke, W. B.; Fortin, P.; Frailis, M.; Fukazawa, Y.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Gehrels, N.; Germani, S.; Giebels, B.; Giglietto, N.; Giommi, P.; Giordano, F.; Giroletti, M.; Glanzman, T.; Godfrey, G.; Grenier, I. A.; Grondin, M.-H.; Grove, J. E.; Guillemot, L.; Guiriec, S.; Gustafsson, M.; Hadasch, D.; Hanabata, Y.; Harding, A. K.; Hayashida, M.; Hays, E.; Hill, A. B.; Horan, D.; Hou, X.; Hughes, R. E.; Iafrate, G.; Itoh, R.; Johannesson, G.; Johnson, R. P.; Johnson, T. E.; Johnson, A. S.; Johnson, T. J.; Kamae, T.; Katagiri, H.; Kataoka, J.; Katsuta, J.; Kawai, N.; Kerr, M.; Knodlseder, J.; Kocevski, D.; Kuss, M.; Lande, J.; Landriu, D.; Latronico, L.; Lemoine-Goumard, M.; Lionetto, A. M.; Llena Garde, M.; Longo, F.; Loparco, F.; Lott, B.; Lovellette, M. N.; Lubrano, P.; Madejski, G. M.; Marelli, M.; Massaro, E.; Mazziotta, M. N.; McConville, W.; McEnery, J. E.; Mehault, J.; Michelson, P. F.; Minuti, M.; Mitthumsiri, W.; Mizuno, T.; Moiseev, A. A.; Mongelli, M.; Monte, C.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Murgia, S.; Nakamori, T.; Naumann-God, O. M.; Norris, J. P.; Nuss, E.; Nymark, T.; Ohno, M.; Ohsugi, T.; Okumura, A.; Omodei, N.; Orlando, E.; Ormes, J. F.; Ozaki, M.; Paneque, D.; Panetta, J. H.; Parent, D.; Perkins, J. S.; Pesce-Rollins, M.; Pierbattista, M.; Pinchera, M.; Piron, F.; Pivato, G.; Porter, T. A.; Racusin, J. L.; Raino, S.; Rando, R.; Razzano, M.; Razzaque, S.; Reimer, A.; Reimer, O.; Reposeur, T.; Ritz, S.; Rochester, L. S.; Romani, R. W.; Roth, M.; Rousseau, R.; Ryde, F.; Sadrozinski, H. F.-W.; Salvetti, D.; Sanchez, D. A.; Saz Parkinson, P. M.; Sbarra, C.; Scargle, J. D.; Schalk, T. L.; Sgro, C.; Shaw, M. S.; Shrader, C.; Siskind, E. J.; Smith, D. A.; Spandre, G.; Spinelli, P.; Stephens, T. E.; Strickman, M. S.; Suson, D. J.; Tajima, H.; Takahashi, H.; Takahashi, T.; Tanaka, T.; Thayer, J. G.; Thayer, J. B.; Thompson, D. J.; Tibaldo, L.; Tibolla, O.; Tinebra, F.; Tinivella, M.; Torres, D. F.; Tosti, G.; Troja, E.; Uchiyama, Y.; Vandenbroucke, J.; van Etten, A.; van Klaveren, B.; Vasileiou, V.; Vianello, G.; Vitale, V.; Waite, A. P.; Wallace, E.; Wang, P.; Werner, M.; Winer, B. L.; Wood, D. L.; Wood, K. S.; Wood, M.; Yang, Z.; Zimmer, S.

2012-06-01

This paper presents a catalog of high-energy γ-ray sources detected, in the 100MeV-100GeV energy range, in the first two years of the Fermi Gamma-ray Space Telescope mission by the Large Area Telescope (LAT), during the period 2008 August 4 (15:43 UTC)-2010 August 1 (01:17 UTC). (4 data files).
File list: InP.PSC.20.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.20.AllAg.iPSC_intermediates mm9 Input control Pluripotent stem cell iPSC intermediates...178446,SRX1178444,SRX1178449,SRX1184108,SRX897944,SRX1178447 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.20.AllAg.iPSC_intermediates.bed ...
File list: InP.PSC.50.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.50.AllAg.iPSC_intermediates mm9 Input control Pluripotent stem cell iPSC intermediates...178448,SRX1178449,SRX1184108,SRX1178444,SRX897944,SRX1178447 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.50.AllAg.iPSC_intermediates.bed ...
File list: InP.PSC.05.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.05.AllAg.iPSC_intermediates mm9 Input control Pluripotent stem cell iPSC intermediates...178445,SRX1178449,SRX1178446,SRX1184108,SRX897944,SRX1178447 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.05.AllAg.iPSC_intermediates.bed ...
File list: InP.PSC.10.AllAg.iPSC_intermediates [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.10.AllAg.iPSC_intermediates mm9 Input control Pluripotent stem cell iPSC intermediates...184108,SRX1178445,SRX1178446,SRX1178449,SRX1178447,SRX897944 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.10.AllAg.iPSC_intermediates.bed ...
The Chandra Source Catalog 2.0: Spectral Properties

Science.gov (United States)

McCollough, Michael L.; Siemiginowska, Aneta; Burke, Douglas; Nowak, Michael A.; Primini, Francis Anthony; Laurino, Omar; Nguyen, Dan T.; Allen, Christopher E.; Anderson, Craig S.; Budynkiewicz, Jamie A.; Chen, Judy C.; Civano, Francesca Maria; D'Abrusco, Raffaele; Doe, Stephen M.; Evans, Ian N.; Evans, Janet D.; Fabbiano, Giuseppina; Gibbs, Danny G., II; Glotfelty, Kenny J.; Graessle, Dale E.; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; Houck, John C.; Lauer, Jennifer L.; Lee, Nicholas P.; Martínez-Galarza, Juan Rafael; McDowell, Jonathan C.; Miller, Joseph; McLaughlin, Warren; Morgan, Douglas L.; Mossman, Amy E.; Nichols, Joy S.; Paxson, Charles; Plummer, David A.; Rots, Arnold H.; Sundheim, Beth A.; Tibbetts, Michael; Van Stone, David W.; Zografou, Panagoula; Chandra Source Catalog Team

2018-01-01

The second release of the Chandra Source Catalog (CSC) contains all sources identified from sixteen years' worth of publicly accessible observations. The vast majority of these sources have been observed with the ACIS detector and have spectral information in 0.5-7 keV energy range. Here we describe the methods used to automatically derive spectral properties for each source detected by the standard processing pipeline and included in the final CSC. The sources with high signal to noise ratio (exceeding 150 net counts) were fit in Sherpa (the modeling and fitting application from the Chandra Interactive Analysis of Observations package) using wstat as a fit statistic and Bayesian draws method to determine errors. Three models were fit to each source: an absorbed power-law, blackbody, and Bremsstrahlung emission. The fitted parameter values for the power-law, blackbody, and Bremsstrahlung models were included in the catalog with the calculated flux for each model. The CSC also provides the source energy fluxes computed from the normalizations of predefined absorbed power-law, black-body, Bremsstrahlung, and APEC models needed to match the observed net X-ray counts. For sources that have been observed multiple times we performed a Bayesian Blocks analysis will have been performed (see the Primini et al. poster) and the most significant block will have a joint fit performed for the mentioned spectral models. In addition, we provide access to data products for each source: a file with source spectrum, the background spectrum, and the spectral response of the detector. Hardness ratios were calculated for each source between pairs of energy bands (soft, medium and hard). This work has been supported by NASA under contract NAS 8-03060 to the Smithsonian Astrophysical Observatory for operation of the Chandra X-ray Center.
Recombinant PrPSc shares structural features with brain-derived PrPSc: Insights from limited proteolysis.

Science.gov (United States)

Sevillano, Alejandro M; Fernández-Borges, Natalia; Younas, Neelam; Wang, Fei; R Elezgarai, Saioa; Bravo, Susana; Vázquez-Fernández, Ester; Rosa, Isaac; Eraña, Hasier; Gil, David; Veiga, Sonia; Vidal, Enric; Erickson-Beltran, Melissa L; Guitián, Esteban; Silva, Christopher J; Nonno, Romolo; Ma, Jiyan; Castilla, Joaquín; R Requena, Jesús

2018-01-01

Very solid evidence suggests that the core of full length PrPSc is a 4-rung β-solenoid, and that individual PrPSc subunits stack to form amyloid fibers. We recently used limited proteolysis to map the β-strands and connecting loops that make up the PrPSc solenoid. Using high resolution SDS-PAGE followed by epitope analysis, and mass spectrometry, we identified positions ~116/118, 133-134, 141, 152-153, 162, 169 and 179 (murine numbering) as Proteinase K (PK) cleavage sites in PrPSc. Such sites likely define loops and/or borders of β-strands, helping us to predict the threading of the β-solenoid. We have now extended this approach to recombinant PrPSc (recPrPSc). The term recPrPSc refers to bona fide recombinant prions prepared by PMCA, exhibiting infectivity with attack rates of ~100%. Limited proteolysis of mouse and bank vole recPrPSc species yielded N-terminally truncated PK-resistant fragments similar to those seen in brain-derived PrPSc, albeit with varying relative yields. Along with these fragments, doubly N- and C-terminally truncated fragments, in particular ~89/97-152, were detected in some recPrPSc preparations; similar fragments are characteristic of atypical strains of brain-derived PrPSc. Our results suggest a shared architecture of recPrPSc and brain PrPSc prions. The observed differences, in particular the distinct yields of specific PK-resistant fragments, are likely due to differences in threading which result in the specific biochemical characteristics of recPrPSc. Furthermore, recombinant PrPSc offers exciting opportunities for structural studies unachievable with brain-derived PrPSc.

THE WISE BLAZAR-LIKE RADIO-LOUD SOURCES: AN ALL-SKY CATALOG OF CANDIDATE γ-RAY BLAZARS

Energy Technology Data Exchange (ETDEWEB)

D' Abrusco, R.; Paggi, A.; Smith, H. A. [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Massaro, F. [Dipartimento di Fisica, Università degli Studi di Torino, via Pietro Giuria 1, I-10125 Torino (Italy); Masetti, N. [INAF/IASF di Bologna, via Gobetti 101, I-40129 Bologna (Italy); Landoni, M. [INAF/Osservatorio Astronomico di Brera, Via E. Bianchi 46, I-23807 Merate (Italy); Tosti, G. [Dipartimento di Fisica, Università degli Studi di Perugia, I-06123 Perugia (Italy)

2014-11-01

We present a catalog of radio-loud candidate γ-ray emitting blazars with WISE mid-infrared colors similar to the colors of confirmed γ-ray blazars. The catalog is assembled from WISE sources detected in all four WISE filters, with colors compatible with the three-dimensional locus of the WISE γ-ray emitting blazars, and which can be spatially cross-matched with radio sources from one of the three radio surveys: NVSS, FIRST, and/or SUMSS. Our initial WISE selection uses a slightly modified version of previously successful algorithms. We then select only the radio-loud sources using a measure of the radio-to-IR flux, the q {sub 22} parameter, which is analogous to the q {sub 24} parameter known in the literature but which instead uses the WISE band-four flux at 22 μm. Our final catalog contains 7855 sources classified as BL Lacs, FSRQs, or mixed candidate blazars; 1295 of these sources can be spatially re-associated as confirmed blazars. We describe the properties of the final catalog of WISE blazar-like radio-loud sources and consider possible contaminants. Finally, we discuss why this large catalog of candidate γ-ray emitting blazars represents a new and useful resource to address the problem of finding low-energy counterparts to currently unidentified high-energy sources.
The Chandra Source Catalog: X-ray Aperture Photometry

Science.gov (United States)

Kashyap, Vinay; Primini, F. A.; Glotfelty, K. J.; Anderson, C. S.; Bonaventura, N. R.; Chen, J. C.; Davis, J. E.; Doe, S. M.; Evans, I. N.; Evans, J. D.; Fabbiano, G.; Galle, E. C.; Gibbs, D. G., II; Grier, J. D.; Hain, R.; Hall, D. M.; Harbo, P. N.; He, X.; Houck, J. C.; Karovska, M.; Lauer, J.; McCollough, M. L.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Nichols, J. S.; Nowak, M. A.; Plummer, D. A.; Refsdal, B. L.; Rots, A. H.; Siemiginowska, A. L.; Sundheim, B. A.; Tibbetts, M. S.; van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2009-09-01

The Chandra Source Catalog (CSC) represents a reanalysis of the entire ACIS and HRC imaging observations over the 9-year Chandra mission. We describe here the method by which fluxes are measured for detected sources. Source detection is carried out on a uniform basis, using the CIAO tool wavdetect. Source fluxes are estimated post-facto using a Bayesian method that accounts for background, spatial resolution effects, and contamination from nearby sources. We use gamma-function prior distributions, which could be either non-informative, or in case there exist previous observations of the same source, strongly informative. The current implementation is however limited to non-informative priors. The resulting posterior probability density functions allow us to report the flux and a robust credible range on it.
First Fermi-LAT Catalog of Sources above 10 GeV (1FHL)

Data.gov (United States)

National Aeronautics and Space Administration — This catalog of LAT sources above 10 GeV reports the locations, spectra, and variability properties of the 514 sources significantly detected in this range during...
The Einstein Observatory catalog of IPC x ray sources. Volume 1E: Documentation

Science.gov (United States)

Harris, D. E.; Forman, W.; Gioia, I. M.; Hale, J. A.; Harnden, F. R., Jr.; Jones, C.; Karakashian, T.; Maccacaro, T.; Mcsweeney, J. D.; Primini, F. A.

1993-01-01

The Einstein Observatory (HEAO-2, launched November 13, 1978) achieved radically improved sensitivity over previous x-ray missions through the use of focusing optics, which simultaneously afforded greatly reduced background and produced true images. During its 2.5-yr mission, the Einstein X-Ray Telescope was pointed toward some 5,000 celestial targets, most of which were detected, and discovered several thousand additional 'serendipitous' sources in the observed fields. This catalog contains contour diagrams and source data, obtained with the imaging proportional counter in the 0.16 to 3.5 keV energy band, and describes methods for recovering upper limits for any sky position within the observed images. The main catalog consists of six volumes (numbered 2 through 7) of right ascension ordered pages, each containing data for one observation. Along with the primary documentation describing how the catalog was constructed, volume 1 contains a complete source list, results for merged fields, a reference system to published papers, and data useful for calculating upper limits and fluxes.
Polarized point sources in the LOFAR Two-meter Sky Survey: A preliminary catalog

Science.gov (United States)

Van Eck, C. L.; Haverkorn, M.; Alves, M. I. R.; Beck, R.; Best, P.; Carretti, E.; Chyży, K. T.; Farnes, J. S.; Ferrière, K.; Hardcastle, M. J.; Heald, G.; Horellou, C.; Iacobelli, M.; Jelić, V.; Mulcahy, D. D.; O'Sullivan, S. P.; Polderman, I. M.; Reich, W.; Riseley, C. J.; Röttgering, H.; Schnitzeler, D. H. F. M.; Shimwell, T. W.; Vacca, V.; Vink, J.; White, G. J.

2018-06-01

The polarization properties of radio sources at very low frequencies (right ascension, 45°-57° declination, 570 square degrees). We have produced a catalog of 92 polarized radio sources at 150 MHz at 4.'3 resolution and 1 mJy rms sensitivity, which is the largest catalog of polarized sources at such low frequencies. We estimate a lower limit to the polarized source surface density at 150 MHz, with our resolution and sensitivity, of 1 source per 6.2 square degrees. We find that our Faraday depth measurements are in agreement with previous measurements and have significantly smaller errors. Most of our sources show significant depolarization compared to 1.4 GHz, but there is a small population of sources with low depolarization indicating that their polarized emission is highly localized in Faraday depth. We predict that an extension of this work to the full LOTSS data would detect at least 3400 polarized sources using the same methods, and probably considerably more with improved data processing.
CHANDRA X-RAY DETECTION OF THE ENIGMATIC FIELD STAR BP Psc

International Nuclear Information System (INIS)

Kastner, Joel H.; Montez, Rodolfo; Rodriguez, David; Zuckerman, B.; Perrin, Marshall D.; Grosso, Nicolas; Forveille, Thierry; Graham, James R.

2010-01-01

BP Psc is a remarkable emission-line field star that is orbited by a dusty disk and drives a parsec-scale system of jets. We report the detection by the Chandra X-ray Observatory of a weak X-ray point source coincident with the centroids of optical/IR and submillimeter continuum emission at BP Psc. As the star's photosphere is obscured throughout the visible and near-infrared, the Chandra X-ray source likely represents the first detection of BP Psc itself. The X-rays most likely originate with magnetic activity at BP Psc and hence can be attributed either to a stellar corona or to star-disk interactions. The log of the ratio of X-ray to bolometric luminosity, log(L X /L bol ), lies in the range -5.8 to -4.2. This is smaller than log(L X /L bol ) ratios typical of low-mass, pre-main sequence stars, but is well within the log(L X /L bol ) range observed for rapidly rotating (FK Com-type) G giant stars. Hence, the Chandra results favor an exotic model wherein the disk/jet system of BP Psc is the result of its very recently engulfing a companion star or a giant planet, as the primary star ascended the giant branch.
PSC/PSI power supply control prototype based on RTEMS

International Nuclear Information System (INIS)

Shi Haoli; Wang Chunhong; Tang Jingyu

2010-01-01

A PSC/PSI power supply control prototype was developed by using an open-source real-time operating system RTEMS and PSC/PSI power supply controller developed by BNL. The structure of the prototype, development procedures as well as testing result with a power supply of a corrector magnet were described. It can switch on/off the power supply, ramp up/down the current, and monitor the real-time states of the power supply. (authors)
The Chandra Source Catalog : Google Earth Interface

Science.gov (United States)

Glotfelty, Kenny; McLaughlin, W.; Evans, I.; Evans, J.; Anderson, C. S.; Bonaventura, N. R.; Davis, J. E.; Doe, S. M.; Fabbiano, G.; Galle, E. C.; Gibbs, D. G., II; Grier, J. D.; Hain, R.; Hall, D. M.; Harbo, P. N.; He, H.; Houck, J. C.; Karovska, M.; Kashyap, V. L.; Lauer, J.; McCollough, M. L.; McDowell, J. C.; Miller, J. B.; Mitschang, A. W.; Morgan, D. L.; Mossman, A. E.; Nichols, J. S.; Nowak, M. A.; Plummer, D. A.; Primini, F. A.; Refsdal, B. L.; Rots, A. R.; Siemiginowska, A. L.; Sundheim, B. A.; Tibbetts, M. S.; van Stone, D. W.; Winkelman, S. L.; Zografou, P.

2009-09-01

The Chandra Source Catalog (CSC) contains multi-resolution, exposure corrected, background subtracted, full-field images that are stored as individual FITS files and as three-color JPEG files. In this poster we discuss how we took these data and were able to, with relatively minimal effort, convert them for use with the Google Earth application in its ``Sky'' mode. We will highlight some of the challenges which include converting the data to the required Mercator projection, reworking the 3-color algorithm for pipeline processing, and ways to reduce the data volume through re-binning, using color-maps, and special Keyhole Markup Language (kml) tags to only load images on-demand. The result is a collection of some 11,000 3-color images that are available for all the individual observation in the CSC Release 1. We also have made available all ˜4000 Field-of-View outlines (with per-chip regions), which turns out are trivial to produce starting with a simple dmlist command. In the first week of release, approximately 40% of the images have been accessed at least once through some 50,000 individual web hits which have served over 4Gb of data to roughly 750 users in 60+ countries. We will also highlight some future directions we are exploring, including real-time catalog access to individual source properties and eventual access to file based products such as FITS images, spectra, and light-curves.
Potential of iPSC-Derived Mesenchymal Stromal Cells for Treating Periodontal Disease

Directory of Open Access Journals (Sweden)

K. Hynes

2018-01-01

Full Text Available Mesenchymal stromal cell-like populations have been derived from mouse-induced pluripotent stem cells (miPSC-MSC with the capability for tissue regeneration. In this study, murine iPSC underwent differentiation towards an MSC-like immunophenotype. Stable miPSC-MSC cultures expressed the MSC-associated markers, CD73, CD105, and Sca-1, but lacked expression of the pluripotency marker, SSEA1, and hematopoietic markers, CD34 and CD45. Functionally, miPSC-MSC exhibited the potential for trilineage differentiation into osteoblasts, adipocytes, and chondrocytes and the capacity to suppress the proliferation of mitogen-activated splenocytes. The efficacy of miPSC-MSC was assessed in an acute inflammation model following systemic or local delivery into mice with subcutaneous implants containing heat-inactivated P. gingivalis. Histological analysis revealed less inflammatory cellular infiltrate within the sponges in mice treated with miPSC-MSC cells delivered locally rather than systemically. Assessment of proinflammatory cytokines in mouse spleens found that CXCL1 transcripts and protein were reduced in mice treated with miPSC-MSC. In a periodontitis model, mice subjected to oral inoculation with P. gingivalis revealed less bone tissue destruction and inflammation within the jaws when treated with miPSC-MSC compared to PBS alone. Our results demonstrated that miPSC-MSC derived from iPSC have the capacity to control acute and chronic inflammatory responses associated with the destruction of periodontal tissue. Therefore, miPSC-MSC present a promising novel source of stromal cells which could be used in the treatment of periodontal disease and other inflammatory systemic diseases such as rheumatoid arthritis.
The Chandra Source Catalog 2.0: Calibrations

Science.gov (United States)

Graessle, Dale E.; Evans, Ian N.; Rots, Arnold H.; Allen, Christopher E.; Anderson, Craig S.; Budynkiewicz, Jamie A.; Burke, Douglas; Chen, Judy C.; Civano, Francesca Maria; D'Abrusco, Raffaele; Doe, Stephen M.; Evans, Janet D.; Fabbiano, Giuseppina; Gibbs, Danny G., II; Glotfelty, Kenny J.; Grier, John D.; Hain, Roger; Hall, Diane M.; Harbo, Peter N.; Houck, John C.; Lauer, Jennifer L.; Laurino, Omar; Lee, Nicholas P.; Martínez-Galarza, Juan Rafael; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph; McLaughlin, Warren; Morgan, Douglas L.; Mossman, Amy E.; Nguyen, Dan T.; Nichols, Joy S.; Nowak, Michael A.; Paxson, Charles; Plummer, David A.; Primini, Francis Anthony; Siemiginowska, Aneta; Sundheim, Beth A.; Tibbetts, Michael; Van Stone, David W.; Zografou, Panagoula

2018-01-01

Among the many enhancements implemented for the release of Chandra Source Catalog (CSC) 2.0 are improvements in the processing calibration database (CalDB). We have included a thorough overhaul of the CalDB software used in the processing. The software system upgrade, called "CalDB version 4," allows for a more rational and consistent specification of flight configurations and calibration boundary conditions. Numerous improvements in the specific calibrations applied have also been added. Chandra's radiometric and detector response calibrations vary considerably with time, detector operating temperature, and position on the detector. The CalDB has been enhanced to provide the best calibrations possible to each observation over the fifteen-year period included in CSC 2.0. Calibration updates include an improved ACIS contamination model, as well as updated time-varying gain (i.e., photon energy) and quantum efficiency maps for ACIS and HRC-I. Additionally, improved corrections for the ACIS quantum efficiency losses due to CCD charge transfer inefficiency (CTI) have been added for each of the ten ACIS detectors. These CTI corrections are now time and temperature-dependent, allowing ACIS to maintain a 0.3% energy calibration accuracy over the 0.5-7.0 keV range for any ACIS source in the catalog. Radiometric calibration (effective area) accuracy is estimated at ~4% over that range. We include a few examples where improvements in the Chandra CalDB allow for improved data reduction and modeling for the new CSC.This work has been supported by NASA under contract NAS 8-03060 to the Smithsonian Astrophysical Observatory for operation of the Chandra X-ray Center.
Blank Field Sources in the ROSAT HRI Brera Multiscale Wavelet catalog

OpenAIRE

Chieregato, M.; Campana, S.; Treves, A.; Moretti, A.; Mignani, R. P.; Tagliaferri, G.

2005-01-01

The search for Blank Field Sources (BFS), i.e. X-ray sources without optical counterparts, paves the way to the identification of unusual objects in the X-ray sky. Here we present four BFS detected in the Brera Multiscale Wavelet catalog of ROSAT HRI observations. This sample has been selected on the basis of source brightness, distance from possible counterparts at other wavelengths, point-like shape and good estimate of the X-ray flux (f_X). The observed f_X and the limiting magnitude of th...
Analysis list: Psc [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Psc Cell line,Embryo + dm3 http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/target/Ps...c.1.tsv http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/target/Psc.5.tsv http://dbarchive.biosciencedbc.jp/ky...ushu-u/dm3/target/Psc.10.tsv http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/colo/Psc.Cell_line.tsv,http://dbarchive.bioscience...dbc.jp/kyushu-u/dm3/colo/Psc.Embryo.tsv http://dbarchive.bioscience...dbc.jp/kyushu-u/dm3/colo/Cell_line.gml,http://dbarchive.biosciencedbc.jp/kyushu-u/dm3/colo/Embryo.gml ...
CONSTRUCTION OF A CALIBRATED PROBABILISTIC CLASSIFICATION CATALOG: APPLICATION TO 50k VARIABLE SOURCES IN THE ALL-SKY AUTOMATED SURVEY

International Nuclear Information System (INIS)

Richards, Joseph W.; Starr, Dan L.; Miller, Adam A.; Bloom, Joshua S.; Brink, Henrik; Crellin-Quick, Arien; Butler, Nathaniel R.

2012-01-01

With growing data volumes from synoptic surveys, astronomers necessarily must become more abstracted from the discovery and introspection processes. Given the scarcity of follow-up resources, there is a particularly sharp onus on the frameworks that replace these human roles to provide accurate and well-calibrated probabilistic classification catalogs. Such catalogs inform the subsequent follow-up, allowing consumers to optimize the selection of specific sources for further study and permitting rigorous treatment of classification purities and efficiencies for population studies. Here, we describe a process to produce a probabilistic classification catalog of variability with machine learning from a multi-epoch photometric survey. In addition to producing accurate classifications, we show how to estimate calibrated class probabilities and motivate the importance of probability calibration. We also introduce a methodology for feature-based anomaly detection, which allows discovery of objects in the survey that do not fit within the predefined class taxonomy. Finally, we apply these methods to sources observed by the All-Sky Automated Survey (ASAS), and release the Machine-learned ASAS Classification Catalog (MACC), a 28 class probabilistic classification catalog of 50,124 ASAS sources in the ASAS Catalog of Variable Stars. We estimate that MACC achieves a sub-20% classification error rate and demonstrate that the class posterior probabilities are reasonably calibrated. MACC classifications compare favorably to the classifications of several previous domain-specific ASAS papers and to the ASAS Catalog of Variable Stars, which had classified only 24% of those sources into one of 12 science classes.
CONSTRUCTION OF A CALIBRATED PROBABILISTIC CLASSIFICATION CATALOG: APPLICATION TO 50k VARIABLE SOURCES IN THE ALL-SKY AUTOMATED SURVEY

Energy Technology Data Exchange (ETDEWEB)

Richards, Joseph W.; Starr, Dan L.; Miller, Adam A.; Bloom, Joshua S.; Brink, Henrik; Crellin-Quick, Arien [Astronomy Department, University of California, Berkeley, CA 94720-3411 (United States); Butler, Nathaniel R., E-mail: jwrichar@stat.berkeley.edu [School of Earth and Space Exploration, Arizona State University, Tempe, AZ 85287 (United States)

2012-12-15

With growing data volumes from synoptic surveys, astronomers necessarily must become more abstracted from the discovery and introspection processes. Given the scarcity of follow-up resources, there is a particularly sharp onus on the frameworks that replace these human roles to provide accurate and well-calibrated probabilistic classification catalogs. Such catalogs inform the subsequent follow-up, allowing consumers to optimize the selection of specific sources for further study and permitting rigorous treatment of classification purities and efficiencies for population studies. Here, we describe a process to produce a probabilistic classification catalog of variability with machine learning from a multi-epoch photometric survey. In addition to producing accurate classifications, we show how to estimate calibrated class probabilities and motivate the importance of probability calibration. We also introduce a methodology for feature-based anomaly detection, which allows discovery of objects in the survey that do not fit within the predefined class taxonomy. Finally, we apply these methods to sources observed by the All-Sky Automated Survey (ASAS), and release the Machine-learned ASAS Classification Catalog (MACC), a 28 class probabilistic classification catalog of 50,124 ASAS sources in the ASAS Catalog of Variable Stars. We estimate that MACC achieves a sub-20% classification error rate and demonstrate that the class posterior probabilities are reasonably calibrated. MACC classifications compare favorably to the classifications of several previous domain-specific ASAS papers and to the ASAS Catalog of Variable Stars, which had classified only 24% of those sources into one of 12 science classes.
VizieR Online Data Catalog: SKY2000 Master Catalog, Version 5 (Myers+ 2006)

Science.gov (United States)

Myers, J. R.; Sande, C. B.; Miller, A. C.; Warren, W. H., Jr.; Tracewell, D. A.

2015-02-01

The SKYMAP Star Catalog System consists of a Master Catalog stellar database and a collection of utility software designed to create and maintain the database and to generate derivative mission star catalogs (run catalogs). It contains an extensive compilation of information on almost 300000 stars brighter than 8.0mag. The original SKYMAP Master Catalog was generated in the early 1970's. Incremental updates and corrections were made over the following years but the first complete revision of the source data occurred with Version 4.0. This revision also produced a unique, consolidated source of astrometric information which can be used by the astronomical community. The derived quantities were removed and wideband and photometric data in the R (red) and I (infrared) systems were added. Version 4 of the SKY2000 Master Catalog was completed in April 2002; it marks the global replacement of the variability identifier and variability data fields. More details can be found in the description file sky2kv4.pdf. The SKY2000 Version 5 Revision 4 Master Catalog differs from Revision 3 in that MK and HD spectral types have been added from the Catalogue of Stellar Spectral Classifications (B. A. Skiff of Lowell Observatory, 2005), which has been assigned source code 50 in this process. 9622 entries now have MK types from this source, while 3976 entries have HD types from this source. SKY2000 V5 R4 also differs globally from preceding MC versions in that the Galactic coordinate computations performed by UPDATE have been increased in accuracy, so that differences from the same quantities from other sources are now typically in the last decimal places carried in the MC. This version supersedes the previous versions 1(V/95), 2(V/102), 3(V/105) and 4(V/109). (6 data files).
The XMM-SERVS survey: new XMM-Newton point-source catalog for the XMM-LSS field

Science.gov (United States)

Chen, C.-T. J.; Brandt, W. N.; Luo, B.; Ranalli, P.; Yang, G.; Alexander, D. M.; Bauer, F. E.; Kelson, D. D.; Lacy, M.; Nyland, K.; Tozzi, P.; Vito, F.; Cirasuolo, M.; Gilli, R.; Jarvis, M. J.; Lehmer, B. D.; Paolillo, M.; Schneider, D. P.; Shemmer, O.; Smail, I.; Sun, M.; Tanaka, M.; Vaccari, M.; Vignali, C.; Xue, Y. Q.; Banerji, M.; Chow, K. E.; Häußler, B.; Norris, R. P.; Silverman, J. D.; Trump, J. R.

2018-04-01

We present an X-ray point-source catalog from the XMM-Large Scale Structure survey region (XMM-LSS), one of the XMM-Spitzer Extragalactic Representative Volume Survey (XMM-SERVS) fields. We target the XMM-LSS region with 1.3 Ms of new XMM-Newton AO-15 observations, transforming the archival X-ray coverage in this region into a 5.3 deg2 contiguous field with uniform X-ray coverage totaling 2.7 Ms of flare-filtered exposure, with a 46 ks median PN exposure time. We provide an X-ray catalog of 5242 sources detected in the soft (0.5-2 keV), hard (2-10 keV), and/or full (0.5-10 keV) bands with a 1% expected spurious fraction determined from simulations. A total of 2381 new X-ray sources are detected compared to previous source catalogs in the same area. Our survey has flux limits of 1.7 × 10-15, 1.3 × 10-14, and 6.5 × 10-15 erg cm-2 s-1 over 90% of its area in the soft, hard, and full bands, respectively, which is comparable to those of the XMM-COSMOS survey. We identify multiwavelength counterpart candidates for 99.9% of the X-ray sources, of which 93% are considered as reliable based on their matching likelihood ratios. The reliabilities of these high-likelihood-ratio counterparts are further confirmed to be ≈97% reliable based on deep Chandra coverage over ≈5% of the XMM-LSS region. Results of multiwavelength identifications are also included in the source catalog, along with basic optical-to-infrared photometry and spectroscopic redshifts from publicly available surveys. We compute photometric redshifts for X-ray sources in 4.5 deg2 of our field where forced-aperture multi-band photometry is available; >70% of the X-ray sources in this subfield have either spectroscopic or high-quality photometric redshifts.
VizieR Online Data Catalog: IR-bright MSX sources in the SMC with Spitzer/IRS (Kraemer+, 2017)

Science.gov (United States)

Kraemer, K. E.; Sloan, G. C.; Wood, P. R.; Jones, O. C.; Egan, M. P.

2017-07-01

Our original set of infrared spectra of MSX SMC sources was obtained in Spitzer Cycle 1 (Program ID 3277, P.I. M. Egan). This program included 35 targets from the MSX SMC catalog. 24 targets were discussed in previous papers; this paper examines the remaining 11 sources in the sample. We also selected 4 objects in the MSX SMC catalog with similar photometric characteristics in an effort to uncover additional sources with crystalline dust. We observed these targets in Spitzer Cycle 3 (Program ID 30355, P.I. J. Houck). See tables 1 and 2 for observation data and basic properties of the targets. Table 3 lists 20 additional MSX SMC sources that were observed by other Spitzer IRS programs. Overall, 59 MSX SMC sources were observed with the IRS. The spectra were observed using the low-resolution modules of the IRS, Short-Low (SL) and Long-Low (LL), which provided spectra in the 5-14 and 14-37um ranges, respectively, at a resolution between ~60 and 120. For 10 evolved stars with oxygen-rich dust in our Cycle 1 program, we obtained spectra from 0.45 to 1.03um with the Double-Beam Spectrograph at the 2.3m telescope of the Australian National University at Siding Spring Observatory. A 0.45-0.89um spectrum for one of the stars in program 30355 was also observed. These spectra have a resolution of 10Å. Tables 5-7: catalog based on the 243 sources detected in the MSX survey of the SMC, updated with positions and photometry from more recent space-based missions and ground-based surveys. See the Appendix section for more details. The SMC catalog from MSX consists of the 243 sources in the main MSX catalog (Egan+ 2003, see V/114) that lie within the region 7°
Human induced pluripotent stem cell (hiPSC)-derived neurons respond to convulsant drugs when co-cultured with hiPSC-derived astrocytes.

Science.gov (United States)

Ishii, Misawa Niki; Yamamoto, Koji; Shoji, Masanobu; Asami, Asano; Kawamata, Yuji

2017-08-15

Accurate risk assessment for drug-induced seizure is expected to be performed before entering clinical studies because of its severity and fatal damage to drug development. Induced pluripotent stem cell (iPSC) technology has allowed the use of human neurons and glial cells in toxicology studies. Recently, several studies showed the advantage of co-culture system of human iPSC (hiPSC)-derived neurons with rodent/human primary astrocytes regarding neuronal functions. However, the application of hiPSC-derived neurons for seizure risk assessment has not yet been fully addressed, and not at all when co-cultured with hiPSC-derived astrocytes. Here, we characterized hiPSC-derived neurons co-cultured with hiPSC-derived astrocytes to discuss how hiPSC-derived neurons are useful to assess seizure risk of drugs. First, we detected the frequency of spikes and synchronized bursts hiPSC-derived neurons when co-cultured with hiPSC-derived astrocytes for 8 weeks. This synchronized burst was suppressed by the treatment with 6-cyano-7-nitroquinoxaline-2,3-dione, α-amino-3-hydroxy-5-methylisoxazole-4-propionic acid (AMPA) receptor antagonist, and D-(-)-2-amino-5-phosphonopentanoic acid, an N-Methyl-d-aspartate (NMDA) receptor antagonist. These data suggested that co-cultured hiPSC-derived neurons formed synaptic connections mediated by AMPA and NMDA receptors. We also demonstrated that co-cultured hiPSC-derived neurons showed epileptiform activity upon treatment with gabazine or kaliotoxin. Finally, we performed single-cell transcriptome analysis in hiPSC-derived neurons and found that hiPSC-derived astrocytes activated the pathways involved in the activities of AMPA and NMDA receptor functions, neuronal polarity, and axon guidance in hiPSC-derived neurons. These data suggested that hiPSC-derived astrocytes promoted the development of action potential, synaptic functions, and neuronal networks in hiPSC-derived neurons, and then these functional alterations result in the epileptiform
A PRECISION MULTI-BAND TWO-EPOCH PHOTOMETRIC CATALOG OF 44 MILLION SOURCES IN THE NORTHERN SKY FROM A COMBINATION OF THE USNO-B AND SLOAN DIGITAL SKY SURVEY CATALOGS

International Nuclear Information System (INIS)

Madsen, G. J.; Gaensler, B. M.

2013-01-01

A key science driver for the next generation of wide-field optical and radio surveys is the exploration of the time variable sky. These surveys will have unprecedented sensitivity and areal coverage, but will be limited in their ability to detect variability on time scales longer than the lifetime of the surveys. We present a new precision, multi-epoch photometric catalog that spans 60 yr by combining the US Naval Observatory-B (USNO-B) and Sloan Digital Sky Survey (SDSS) Data Release 9 (DR9) catalogs. We recalibrate the photometry of the original USNO-B catalog and create a catalog with two epochs of photometry in up to five different bands for 43,647,887 optical point sources that lie in the DR9 footprint of the northern sky. The recalibrated objects span a magnitude range 14 ≲ m ≲ 20 and are accurate to ≈0.1 mag. We minimize the presence of spurious objects and those with inaccurate magnitudes by identifying and removing several sources of systematic errors in the two originating catalogs, with a focus on spurious objects that exhibit large apparent magnitude variations. After accounting for these effects, we find ≈250,000 stars and quasars that show significant (≥4σ) changes in brightness between the USNO-B and SDSS DR9 epochs. We discuss the historical value of the catalog and its application to the study of long time scale, large amplitude variable stars and quasars
The HST/ACS Coma Cluster Survey. II. Data Description and Source Catalogs

Science.gov (United States)

Hammer, Derek; Kleijn, Gijs Verdoes; Hoyos, Carlos; Den Brok, Mark; Balcells, Marc; Ferguson, Henry C.; Goudfrooij, Paul; Carter, David; Guzman, Rafael; Peletier, Reynier F.;

2010-01-01

The Coma cluster, Abell 1656, was the target of a HST-ACS Treasury program designed for deep imaging in the F475W and F814W passbands. Although our survey was interrupted by the ACS instrument failure in early 2007, the partially-completed survey still covers approximately 50% of the core high density region in Coma. Observations were performed for twenty-five fields with a total coverage area of 274 aremin(sup 2), and extend over a wide range of cluster-centric radii (approximately 1.75 Mpe or 1 deg). The majority of the fields are located near the core region of Coma (19/25 pointings) with six additional fields in the south-west region of the cluster. In this paper we present SEXTRACTOR source catalogs generated from the processed images, including a detailed description of the methodology used for object detection and photometry, the subtraction of bright galaxies to measure faint underlying objects, and the use of simulations to assess the photometric accuracy and completeness of our catalogs. We also use simulations to perform aperture corrections for the SEXTRACTOR Kron magnitudes based only on the measured source flux and its half-light radius. We have performed photometry for 76,000 objects that consist of roughly equal numbers of extended galaxies and unresolved objects. Approximately two-thirds of all detections are brighter than F814W=26.5 mag (AB), which corresponds to the 10sigma, point-source detection limit. We estimate that Coma members are 5-10% of the source detections, including a large population of compact objects (primarily GCs, but also cEs and UCDs), and a wide variety of extended galaxies from cD galaxies to dwarf low surface brightness galaxies. The initial data release for the HST-ACS Coma Treasury program was made available to the public in August 2008. The images and catalogs described in this study relate to our second data release.

THE HST/ACS COMA CLUSTER SURVEY. II. DATA DESCRIPTION AND SOURCE CATALOGS

International Nuclear Information System (INIS)

Hammer, Derek; Verdoes Kleijn, Gijs; Den Brok, Mark; Peletier, Reynier F.; Hoyos, Carlos; Balcells, Marc; Aguerri, Alfonso L.; Ferguson, Henry C.; Goudfrooij, Paul; Carter, David; Guzman, Rafael; Smith, Russell J.; Lucey, John R.; Graham, Alister W.; Trentham, Neil; Peng, Eric; Puzia, Thomas H.; Jogee, Shardha; Batcheldor, Dan; Bridges, Terry J.

2010-01-01

The Coma cluster, Abell 1656, was the target of an HST-ACS Treasury program designed for deep imaging in the F475W and F814W passbands. Although our survey was interrupted by the ACS instrument failure in early 2007, the partially completed survey still covers ∼50% of the core high-density region in Coma. Observations were performed for 25 fields that extend over a wide range of cluster-centric radii (∼1.75 Mpc or 1 0 ) with a total coverage area of 274 arcmin 2 . The majority of the fields are located near the core region of Coma (19/25 pointings) with six additional fields in the southwest region of the cluster. In this paper, we present reprocessed images and SEXTRACTOR source catalogs for our survey fields, including a detailed description of the methodology used for object detection and photometry, the subtraction of bright galaxies to measure faint underlying objects, and the use of simulations to assess the photometric accuracy and completeness of our catalogs. We also use simulations to perform aperture corrections for the SEXTRACTOR Kron magnitudes based only on the measured source flux and its half-light radius. We have performed photometry for ∼73,000 unique objects; approximately one-half of our detections are brighter than the 10σ point-source detection limit at F814W = 25.8 mag (AB). The slight majority of objects (60%) are unresolved or only marginally resolved by ACS. We estimate that Coma members are 5%-10% of all source detections, which consist of a large population of unresolved compact sources (primarily globular clusters but also ultra-compact dwarf galaxies) and a wide variety of extended galaxies from a cD galaxy to dwarf low surface brightness galaxies. The red sequence of Coma member galaxies has a color-magnitude relation with a constant slope and dispersion over 9 mag (-21 F814W < -13). The initial data release for the HST-ACS Coma Treasury program was made available to the public in 2008 August. The images and catalogs described
The Arecibo Legacy Fast ALFA Survey : The alpha.40 HI Source Catalog, its Characteristics and their Impact on the Derivation of the HI Mass Function

NARCIS (Netherlands)

Haynes, Martha P.; Giovanelli, Riccardo; Martin, Ann M.; Hess, Kelley M.; Saintonge, Amelie; Adams, Elizabeth A. K.; Hallenbeck, Gregory; Hoffman, G. Lyle; Huang, Shan; Kent, Brian R.; Koopmann, Rebecca A.; Papastergis, Emmanouil; Stierwalt, Sabrina; Balonek, Thomas J.; Craig, David W.; Higdon, Sarah J. U.; Kornreich, David A.; Miller, Jeffrey R.; O'Donoghue, Aileen A.; Olowin, Ronald P.; Rosenberg, Jessica L.; Spekkens, Kristine; Troischt, Parker; Wilcots, Eric M.

2011-01-01

We present a current catalog of 21 cm HI line sources extracted from the Arecibo Legacy Fast Arecibo L-band Feed Array (ALFALFA) survey over ~2800 square degrees of sky: the alpha.40 catalog. Covering 40% of the final survey area, the alpha.40 catalog contains 15855 sources in the regions 07h30m
Comparative clinical characteristics and natural history of three variants of sclerosing cholangitis: IgG4-related SC, PSC/AIH and PSC alone.

Science.gov (United States)

Lian, Min; Li, Bo; Xiao, Xiao; Yang, Yue; Jiang, Pan; Yan, Li; Sun, Chunyan; Zhang, Jun; Wei, Yiran; Li, Yanmei; Chen, Weihua; Jiang, Xiang; Miao, Qi; Chen, Xiaoyu; Qiu, Dekai; Sheng, Li; Hua, Jing; Tang, Ruqi; Wang, Qixia; Eric Gershwin, M; Ma, Xiong

2017-08-01

There is increased interest and recognition of the clinical variants of Sclerosing Cholangitis (SC) namely IgG4-SC, PSC/AIH overlap and PSC. For most Centers, the characteristic of IgG4-SC has not been thoroughly clinically compared with other sclerosing cholangitis variants. Further there are relatively few PSC/AIH overlap patients and the clinical outcome is not well characterized, especially for the PSC/AIH overlap syndrome. Our objective herein is to clarify the differences and similarities of the natural history of IgG4-SC, the PSC/AIH overlap and PSC alone. We also place in perspective the diagnostic value of serum IgG4 for IgG4-SC and investigate biomarkers for predicting the prognosis of sclerosing cholangitis. In this study, we took advantage of our large and well-defined patient cohort to perform a retrospective cohort study including 57 IgG4-SC, 36 PSC/AIH overlap patients, and 55 PSC patients. Firstly, as expected, we noted significant differences among immunoglobulin profiles and all patients exhibited similar cholestatic profiles at presentation. Cirrhotic events were found in 20 of total 57 IgG4-SC, 15 of 36 PSC/AIH overlap, and 18 of 55 PSC patients. Serum IgG4 was elevated in 92.65% of IgG4-SC patients with an 86% sensitivity and 98% specificity for diagnosis. IgG4-SC patients had a better treatment response at 6-month and 1-year than PSC/AIH patients, while the latter responded better with steroids than PSC patients. Importantly the adverse outcome-free survival of IgG4-SC patients was reduced, unlike earlier reports, and therefore similar to the PSC/AIH overlap syndrome. Serum IgG and total bilirubin were useful to predict long-term survival of IgG4-SC and PSC/AIH, respectively. In conclusion, serum IgG4≧1.25 ULN shows an excellent predictability to distinguish IgG4-SC among SC patients. IgG4-SC appears to be immune-mediated inflammatory process, while PSC/AIH overlap more tends to be cholestatic disease. Copyright © 2017 Elsevier B.V. All
VizieR Online Data Catalog: Flaring gamma-ray sources; LAT 7.4yr (2FAV) (Abdollahi+, 2017)

Science.gov (United States)

Abdollahi, S.; Ackermann, M.; Ajello, M.; Albert, A.; Baldini, L.; Ballet, J.; Barbiellini, G.; Bastieri, D.; Becerra Gonzalez, J.; Bellazzini, R.; Bissaldi, E.; Blandford, R. D.; Bloom, E. D.; Bonino, R.; Bottacini, E.; Bregeon, J.; Bruel, P.; Buehler, R.; Buson, S.; Cameron, R. A.; Caragiulo, M.; Caraveo, P. A.; Cavazzuti, E.; Cecchi, C.; Chekhtman, A.; Cheung, C. C.; Chiaro, G.; Ciprini, S.; Conrad, J.; Costantin, D.; Costanza, F.; Cutini, S.; D'Ammando, F.; de Palma, F.; Desai, A.; Desiante, R.; Digel, S. W.; di Lalla, N.; di Mauro, M.; di Venere, L.; Donaggio, B.; Drell, P. S.; Favuzzi, C.; Fegan, S. J.; Ferrara, E. C.; Focke, W. B.; Franckowiak, A.; Fukazawa, Y.; Funk, S.; Fusco, P.; Gargano, F.; Gasparrini, D.; Giglietto, N.; Giomi, M.; Giordano, F.; Giroletti, M.; Glanzman, T.; Green, D.; Grenier, I. A.; Grove, J. E.; Guillemot, L.; Guiriec, S.; Hays, E.; Horan, D.; Jogler, T.; Johannesson, G.; Johnson, A. S.; Kocevski, D.; Kuss, M.; La Mura, G.; Larsson, S.; Latronico, L.; Li, J.; Longo, F.; Loparco, F.; Lovellette, M. N.; Lubrano, P.; Magill, J. D.; Mal! Dera, S.; Manfreda, A.; Mayer, M.; Mazziotta, M. N.; Michelson, P. F.; Mitthumsiri, W.; Mizuno, T.; Monzani, M. E.; Morselli, A.; Moskalenko, I. V.; Negro, M.; Nuss, E.; Ohsugi, T.; Omodei, N.; Orienti, M.; Orlando, E.; Paliya, V. S.; Paneque, D.; Perkins, J. S.; Persic, M.; Pesce-Rollins, M.; Petrosian, V.; Piron, F.; Porter, T. A.; Principe, G.; Raino, S.; Rando, R.; Razzano, M.; Razzaque, S.; Reimer, A.; Reimer, O.; Sgro, C.; Simone, D.; Siskind, E. J.; Spada, F.; Spandre, G.; Spinelli, P.; Stawarz, L.; Suson, D. J.; Takahashi, M.; Tanaka, K.; Thayer, J. B.; Thompson, D. J.; Torres, D. F.; Torresi, E.; Tosti, G.; Troja, E.; Vianello, G.; Wood, K. S.

2018-04-01

To build the second catalog of flaring gamma-ray sources (2FAV) catalog, we apply the Fermi All-sky Variability Analysis (FAVA; Ackermann+ 2013, J/ApJ/771/57) to the first 387 weeks of Fermi observations, from Mission Elapsed Time (MET) 239557418 to 473615018, or Modified Julian Date (MJD) from 54682 (2008 August 4) to 57391 (2016 January 4). In this time range, a total of 7106 seed flares were found, roughly 18 per week. As for the previous catalog, FAVA uses weekly time bins. Two independent energy bands are used, 0.1-0.8GeV and 0.8-300GeV, to enhance the sensitivity to spectrally soft and hard flares, respectively. (2 data files).
A search for hot post-AGE stars in the IRAS Point Source Catalog

NARCIS (Netherlands)

Oudmaijer, RD

In this paper a first step is made to search for hot post-AGB stars in the IRAS Point Source Catalog. In order to find objects that evolved off the AGE a longer time ago than post-AGB objects discussed in the literature, objects that were not detected at 12 mu m by IRAS were selected. The selection
Pretreatment with a γ-Secretase Inhibitor Prevents Tumor-like Overgrowth in Human iPSC-Derived Transplants for Spinal Cord Injury

Directory of Open Access Journals (Sweden)

Toshiki Okubo

2016-10-01

Full Text Available Neural stem/progenitor cells (NS/PCs derived from human induced pluripotent stem cells (hiPSCs are considered to be a promising cell source for cell-based interventions that target CNS disorders. We previously reported that transplanting certain hiPSC-NS/PCs in the spinal cord results in tumor-like overgrowth of hiPSC-NS/PCs and subsequent deterioration of motor function. Remnant immature cells should be removed or induced into more mature cell types to avoid adverse effects of hiPSC-NS/PC transplantation. Because Notch signaling plays a role in maintaining NS/PCs, we evaluated the effects of γ-secretase inhibitor (GSI and found that pretreating hiPSC-NS/PCs with GSI promoted neuronal differentiation and maturation in vitro, and GSI pretreatment also reduced the overgrowth of transplanted hiPSC-NS/PCs and inhibited the deterioration of motor function in vivo. These results indicate that pretreatment with hiPSC-NS/PCs decreases the proliferative capacity of transplanted hiPSC-NS/PCs, triggers neuronal commitment, and improves the safety of hiPSC-based approaches in regenerative medicine.
VizieR Online Data Catalog: URAT Parallax Catalog (UPC) (Finch+, 2016)

Science.gov (United States)

Finch, C. T.; Zacharias, N.

2016-04-01

parallax and 10.8mas for stars matched to external parallax sources. This catalog covers the sky from about North of -12.75° declination. This catalog was matched with the Hipparcos catalog, Yale Parallax Catalog, (Finch & Zacharias, 2016, AJ, in press), MEarth (Dittmann et. al., 2014ApJ...784..156D) and the SIMBAD database to obtain known parallax and star names. For stars matched to SIMBAD using the automated search feature, only the parallaxes are given so no information on the parallax errors or source for the parallax are reported for those stars in this catalog. A flag is included to show which catalog or database the URAT parallax was matched with. Only the data from the first catalog that was matched is reported here according to the following priority list. This means for example, if a star was matched with Hipparcos, that information was used while possible other catalog data are not listed here. -------------------------------------------------------- # stars flg catalog -------------------------------------------------------- 53500 0 no catalog match 55549 1 Hipparcos 254 2 Yale Parallax Catalog 1041 3 Finch and Zacharias 2016 (UPM NNNN-NNNN) 1431 4 MEarth parallaxes 402 5 SIMBAD Database (w/parallax) -------------------------------------------------------- 112177 total number stars in catalog -------------------------------------------------------- Not all parallaxes from the URAT epoch data are included in this catalog. Only those data meeting the following criteria have been included. For the epoch data we only used data having a FWHM=20 and epoch span>=1.0 years. The limits imposed on individual image amplitude, image profile width (FWHM) and position fit errors (sigma) are set to not allow saturated stars, stars with too few photons or poorly determined positions to be used in the parallax solution. We present all URAT parallax solutions having a known parallax from an external data source regardless of the quality of the solution (srcflg=1-5). This was
iPSC Core

Data.gov (United States)

Federal Laboratory Consortium — The induced Pluripotent Stem Cells (iPSC) Core was created in 2011 to accelerate stem cell research in the NHLBI by providing investigators consultation, technical...
VizieR Online Data Catalog: The FIRST Survey Catalog, Version 2014Dec17 (Helfand+ 2015)

Science.gov (United States)

Helfand, D. J.; White, R. L.; Becker, R. H.

2015-05-01

The Faint Images of the Radio Sky at Twenty centimeters (FIRST) began in 1993. It uses the VLA (Very Large Array, a facility of the National Radio Observatory (NRAO)) at a frequency of 1.4GHz, and it is slated to 10,000 deg2 of the North and South Galactic Caps, to a sensitivity of about 1mJy with an angular resolution of about 5''. The images produced by an automated mapping pipeline have pixels of 1.8'', a typical rms of 0.15mJy, and a resolution of 5''; the images are available on the Internet (see the FIRST home page at http://sundog.stsci.edu/ for details). The source catalogue is derived from the images. This catalog from the 1993 through 2011 observations contains 946,432 sources from the north and south Galactic caps. It covers a total of 10,575 square degrees of the sky (8444 square degrees in the north and 2131 square degrees in the south). In this version of the catalog, images taken in the the new EVLA configuration have been re-reduced using shallower CLEAN thresholds in order to reduce the "CLEAN bias" in those images. Also, the EVLA images are not co-added with older VLA images to avoid problems resulting from the different frequencies and noise properties of the configurations. That leads to small gaps in the sky coverage at boundaries between the EVLA and VLA regions. As a result, the area covered by this release of the catalog is about 60 square degrees smaller than the earlier release of the catalog (13Jun05, also available here as the "first13.dat" file), and the total number of sources is reduced by nearly 25,000. The previous version of the catalog does have sources in the overlap regions, but their flux densities are considered unreliable due to calibration errors. The flux densities should be more accurate in this catalog, biases are smaller, and the incidence of spurious sources is also reduced. Over most of the survey area, the detection limit is 1 mJy. A region along the equatorial strip (RA=21.3 to 3.3hr, Dec=-1 to 1deg) has a deeper
The Online Catalog: Issues in Planning and Development.

Science.gov (United States)

Richards, Timothy F.

1984-01-01

Discusses key issues to be addressed in planning for introduction of online public access catalog in academic research library environment. Purpose of catalog, reasons to adopt catalog, user behavior, use of catalog records, authority control, shared or unique systems, and impact on staff are highlighted. Seventy-three sources are cited. (EJS)
Event Discrimination Using Seismoacoustic Catalog Probabilities

Science.gov (United States)

Albert, S.; Arrowsmith, S.; Bowman, D.; Downey, N.; Koch, C.

2017-12-01

Presented here are three seismoacoustic catalogs from various years and locations throughout Utah and New Mexico. To create these catalogs, we combine seismic and acoustic events detected and located using different algorithms. Seismoacoustic events are formed based on similarity of origin time and location. Following seismoacoustic fusion, the data is compared against ground truth events. Each catalog contains events originating from both natural and anthropogenic sources. By creating these seismoacoustic catalogs, we show that the fusion of seismic and acoustic data leads to a better understanding of the nature of individual events. The probability of an event being a surface blast given its presence in each seismoacoustic catalog is quantified. We use these probabilities to discriminate between events from natural and anthropogenic sources. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology and Engineering Solutions of Sandia, LLC., a wholly owned subsidiary of Honeywell International, Inc., for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-NA-0003525.
An Open Catalog for Supernova Data

International Nuclear Information System (INIS)

Guillochon, James; Parrent, Jerod; Kelley, Luke Zoltan; Margutti, Raffaella

2017-01-01

We present the Open Supernova Catalog , an online collection of observations and metadata for presently 36,000+ supernovae and related candidates. The catalog is freely available on the web (https://sne.space), with its main interface having been designed to be a user-friendly, rapidly searchable table accessible on desktop and mobile devices. In addition to the primary catalog table containing supernova metadata, an individual page is generated for each supernova, which displays its available metadata, light curves, and spectra spanning X-ray to radio frequencies. The data presented in the catalog is automatically rebuilt on a daily basis and is constructed by parsing several dozen sources, including the data presented in the supernova literature and from secondary sources such as other web-based catalogs. Individual supernova data is stored in the hierarchical, human- and machine-readable JSON format, with the entirety of each supernova’s data being contained within a single JSON file bearing its name. The setup we present here, which is based on open-source software maintained via git repositories hosted on github, enables anyone to download the entirety of the supernova data set to their home computer in minutes, and to make contributions of their own data back to the catalog via git. As the supernova data set continues to grow, especially in the upcoming era of all-sky synoptic telescopes, which will increase the total number of events by orders of magnitude, we hope that the catalog we have designed will be a valuable tool for the community to analyze both historical and contemporary supernovae.
An Open Catalog for Supernova Data

Energy Technology Data Exchange (ETDEWEB)

Guillochon, James; Parrent, Jerod; Kelley, Luke Zoltan [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Margutti, Raffaella, E-mail: jguillochon@cfa.harvard.edu [Center for Interdisciplinary Exploration and Research in Astrophysics (CIERA) and Department of Physics and Astrophysics, Northwestern University, Evanston, IL 60208 (United States)

2017-01-20

We present the Open Supernova Catalog , an online collection of observations and metadata for presently 36,000+ supernovae and related candidates. The catalog is freely available on the web (https://sne.space), with its main interface having been designed to be a user-friendly, rapidly searchable table accessible on desktop and mobile devices. In addition to the primary catalog table containing supernova metadata, an individual page is generated for each supernova, which displays its available metadata, light curves, and spectra spanning X-ray to radio frequencies. The data presented in the catalog is automatically rebuilt on a daily basis and is constructed by parsing several dozen sources, including the data presented in the supernova literature and from secondary sources such as other web-based catalogs. Individual supernova data is stored in the hierarchical, human- and machine-readable JSON format, with the entirety of each supernova’s data being contained within a single JSON file bearing its name. The setup we present here, which is based on open-source software maintained via git repositories hosted on github, enables anyone to download the entirety of the supernova data set to their home computer in minutes, and to make contributions of their own data back to the catalog via git. As the supernova data set continues to grow, especially in the upcoming era of all-sky synoptic telescopes, which will increase the total number of events by orders of magnitude, we hope that the catalog we have designed will be a valuable tool for the community to analyze both historical and contemporary supernovae.
Implications from XMM and Chandra Source Catalogs for Future Studies with Lynx

Science.gov (United States)

Ptak, Andrew

2018-01-01

Lynx will perform extremely sensitive X-ray surveys by combining very high-resolution imaging over a large field of view with a high effective area. These will include deep planned surveys and serendipitous source surveys. Here we discuss implications that can be gleaned from current Chandra and XMM-Newton serendipitous source surveys. These current surveys have discovered novel sources such as tidal disruption events, binary AGN, and ULX pulsars. In addition these surveys have detected large samples of normal galaxies, low-luminosity AGN and quasars due to the wide-area coverage of the Chandra and XMM-Newton source catalogs, allowing the evolution of these phenonema to be explored. The wide area Lynx surveys will probe down further in flux and will be coupled with very sensitive wide-area surveys such as LSST and SKA, allowing for detailed modeling of their SEDs and the discovery of rare, exotic sources and transient events.
A national standard for psychosocial safety climate (PSC): PSC 41 as the benchmark for low risk of job strain and depressive symptoms.

Science.gov (United States)

Bailey, Tessa S; Dollard, Maureen F; Richards, Penny A M

2015-01-01

Despite decades of research from around the world now permeating occupational health and safety (OHS) legislation and guidelines, there remains a lack of tools to guide practice. Our main goal was to establish benchmark levels of psychosocial safety climate (PSC) that would signify risk of job strain (jobs with high demands and low control) and depression in organizations. First, to justify our focus on PSC, using interview data from Australian employees matched at 2 time points 12 months apart (n = 1081), we verified PSC as a significant leading predictor of job strain and in turn depression. Next, using 2 additional data sets (n = 2097 and n = 1043) we determined benchmarks of organizational PSC (range 12-60) for low-risk (PSC at 41 or above) and high-risk (PSC at 37 or below) of employee job strain and depressive symptoms. Finally, using the newly created benchmarks we estimated the population attributable risk (PAR) and found that improving PSC in organizations to above 37 could reduce 14% of job strain and 16% of depressive symptoms in the working population. The results provide national standards that organizations and regulatory agencies can utilize to promote safer working environments and lower the risk of harm to employee mental health. PsycINFO Database Record (c) 2014 APA, all rights reserved.
Internet Based, GIS Catalog of Non-Traditional Sources of Cooling Water for Use at America's Coal-Fired Power Plants

Energy Technology Data Exchange (ETDEWEB)

J. Daniel Arthur

2011-09-30

In recent years, rising populations and regional droughts have caused coal-fired power plants to temporarily curtail or cease production due to a lack of available water for cooling. In addition, concerns about the availability of adequate supplies of cooling water have resulted in cancellation of plans to build much-needed new power plants. These issues, coupled with concern over the possible impacts of global climate change, have caused industry and community planners to seek alternate sources of water to supplement or replace existing supplies. The Department of Energy, through the National Energy Technology Laboratory (NETL) is researching ways to reduce the water demands of coal-fired power plants. As part of the NETL Program, ALL Consulting developed an internet-based Catalog of potential alternative sources of cooling water. The Catalog identifies alternative sources of water, such as mine discharge water, oil and gas produced water, saline aquifers, and publicly owned treatment works (POTWs), which could be used to supplement or replace existing surface water sources. This report provides an overview of the Catalog, and examines the benefits and challenges of using these alternative water sources for cooling water.
VizieR Online Data Catalog: Intermediate-luminosity X-ray objects catalog (Colbert+, 2002)

Science.gov (United States)

Colbert, E. J. M.; Ptak, A. F.

2002-11-01

ROSAT, and now Chandra, X-ray images allow studies of extranuclear X-ray point sources in galaxies other than our own. X-ray observations of normal galaxies with ROSAT and Chandra have revealed that off-nuclear, compact, intermediate-luminosity (LX[2-10keV]>=1039erg/s) X-ray objects (IXOs, a.k.a. ULXs [ultraluminous X-ray sources]) are quite common. Here we present a catalog and finding charts for 87 IXOs in 54 galaxies, derived from all of the ROSAT HRI imaging data for galaxies with cz<=5000km/s from the Third Reference Catalog of Bright Galaxies. (2 data files).
VizieR Online Data Catalog: CANDELS multiwavelength catalog (Galametz+, 2013)

Science.gov (United States)

Galametz, A.; Grazian, A.; Fontana, A.; Ferguson, H. C.; Ashby, M. L. N.; Barro, G.; Castellano, M.; Dahlen, T.; Donley, J. L.; Faber, S. M.; Grogin, N.; Guo, Y.; Huang, K.-H.; Kocevski, D. D.; Koekemoer, A. M.; Lee, K.-S.; McGrath, E. J.; Peth, M.; Willner, S. P.; Almaini, O.; Cooper, M.; Cooray, A.; Conselice, C. J.; Dickinson, M.; Dunlop, J. S.; Fazio, G. G.; Foucaud, S.; Gardner, J. P.; Giavalisco, M.; Hathi, N. P.; Hartley, W. G.; Koo, D. C.; Lai, K.; de Mello, D. F.; McLure, R. J.; Lucas, R. A.; Paris, D.; Pentericci, L.; Santini, P.; Simpson, C.; Sommariva, V.; Targett, T.; Weiner, B. J.; Wuyts, S.; CANDELS Team

2013-06-01

The present multiwavelength catalog is based on public data in the CANDELS UDS field (J2000 position: 02:17:37.5-05:12:00) located within the original UDS field. It includes: * CANDELS HST/ACS (F606W, F814W) and HST/WFC3 (F125W, F160W); Grogin et al. 2011ApJS..197...35G, Koekemoer et al. 2011ApJS..197...36K. * CFHT U-band (UKIDSS; Almaini et al. in prep.), * SUBARU B, V, Rc, i', z' (SXDS; Furusawa et al. 2008, Cat. J/ApJS/176/1) * VLT/HAWK-I Y and Ks bands (HUGS; Fontana et al. in prep.) * UKIRT/WFCam J, H, K (UKIDSS DR8; Almaini et al. in prep.) * Spitzer/IRAC SEDS 3.6 and 4.5um (SEDS; Ashby et al. 2013ApJ...769...80A) * Spitzer/IRAC SpUDS 5.8, 8.0um (PI: J. Dunlop). The catalog is F160W-selected and contains 35932 sources over an area of 201.7 square arcmin and includes radio and X-ray detected sources and spectroscopic redshifts available for 210 sources. The full official CANDELS UDS catalog (which contains some extra columns including additional SExtractor parameters derived from the F160W image) can be found on the CANDELS website at: http://candels.ucolick.org/data_access/UDS.html (1 data file).
Structural Immaturity of Human iPSC-Derived Cardiomyocytes: In Silico Investigation of Effects on Function and Disease Modeling

Science.gov (United States)

Koivumäki, Jussi T.; Naumenko, Nikolay; Tuomainen, Tomi; Takalo, Jouni; Oksanen, Minna; Puttonen, Katja A.; Lehtonen, Šárka; Kuusisto, Johanna; Laakso, Markku; Koistinaho, Jari; Tavi, Pasi

2018-01-01

Background: Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) have emerged as a promising experimental tool for translational heart research and drug development. However, their usability as a human adult cardiomyocyte model is limited by their functional immaturity. Our aim is to analyse quantitatively those characteristics and how they differ from adult CMs. Methods and Results: We have developed a novel in silico model with all essential functional electrophysiology and calcium handling features of hiPSC-CMs. Importantly, the virtual cell recapitulates the immature intracellular ion dynamics that are characteristic for hiPSC-CMs, as quantified based our in vitro imaging data. The strong “calcium clock” is a source for a dual function of excitation-contraction coupling in hiPSC-CMs: action potential and calcium transient morphology vary substantially depending on the activation sequence of underlying ionic currents and fluxes that is altered in spontaneous vs. paced mode. Furthermore, parallel simulations with hiPSC-CM and adult cardiomyocyte models demonstrate the central differences. Results indicate that hiPSC-CMs translate poorly the disease specific phenotypes of Brugada syndrome, long QT Syndrome and catecholaminergic polymorphic ventricular tachycardia, showing less robustness and greater tendency for arrhythmic events than adult CMs. Based on a comparative sensitivity analysis, hiPSC-CMs share some features with adult CMs, but are still functionally closer to prenatal CMs than adult CMs. A database analysis of 3000 hiPSC-CM model variants suggests that hiPSC-CMs recapitulate poorly fundamental physiological properties of adult CMs. Single modifications do not appear to solve this problem, which is mostly contributed by the immaturity of intracellular calcium handling. Conclusion: Our data indicates that translation of findings from hiPSC-CMs to human disease should be made with great caution. Furthermore, we established a
Comparative study of human embryonic stem cells (hESC and human induced pluripotent stem cells (hiPSC as a treatment for retinal dystrophies

Directory of Open Access Journals (Sweden)

Marina Riera

2016-01-01

Full Text Available Retinal dystrophies (RD are major causes of familial blindness and are characterized by progressive dysfunction of photoreceptor and/or retinal pigment epithelium (RPE cells. In this study, we aimed to evaluate and compare the therapeutic effects of two pluripotent stem cell (PSC-based therapies. We differentiated RPE from human embryonic stem cells (hESCs or human-induced pluripotent stem cells (hiPSCs and transplanted them into the subretinal space of the Royal College of Surgeons (RCS rat. Once differentiated, cells from either source of PSC resembled mature RPE in their morphology and gene expression profile. Following transplantation, both hESC- and hiPSC-derived cells maintained the expression of specific RPE markers, lost their proliferative capacity, established tight junctions, and were able to perform phagocytosis of photoreceptor outer segments. Remarkably, grafted areas showed increased numbers of photoreceptor nuclei and outer segment disk membranes. Regardless of the cell source, human transplants protected retina from cell apoptosis, glial stress and accumulation of autofluorescence, and responded better to light stimuli. Altogether, our results show that hESC- and hiPSC-derived cells survived, migrated, integrated, and functioned as RPE in the RCS rat retina, providing preclinical evidence that either PSC source could be of potential benefit for treating RD.

Comparative study of human embryonic stem cells (hESC) and human induced pluripotent stem cells (hiPSC) as a treatment for retinal dystrophies

Science.gov (United States)

Riera, Marina; Fontrodona, Laura; Albert, Silvia; Ramirez, Diana Mora; Seriola, Anna; Salas, Anna; Muñoz, Yolanda; Ramos, David; Villegas-Perez, Maria Paz; Zapata, Miguel Angel; Raya, Angel; Ruberte, Jesus; Veiga, Anna; Garcia-Arumi, Jose

2016-01-01

Retinal dystrophies (RD) are major causes of familial blindness and are characterized by progressive dysfunction of photoreceptor and/or retinal pigment epithelium (RPE) cells. In this study, we aimed to evaluate and compare the therapeutic effects of two pluripotent stem cell (PSC)-based therapies. We differentiated RPE from human embryonic stem cells (hESCs) or human-induced pluripotent stem cells (hiPSCs) and transplanted them into the subretinal space of the Royal College of Surgeons (RCS) rat. Once differentiated, cells from either source of PSC resembled mature RPE in their morphology and gene expression profile. Following transplantation, both hESC- and hiPSC-derived cells maintained the expression of specific RPE markers, lost their proliferative capacity, established tight junctions, and were able to perform phagocytosis of photoreceptor outer segments. Remarkably, grafted areas showed increased numbers of photoreceptor nuclei and outer segment disk membranes. Regardless of the cell source, human transplants protected retina from cell apoptosis, glial stress and accumulation of autofluorescence, and responded better to light stimuli. Altogether, our results show that hESC- and hiPSC-derived cells survived, migrated, integrated, and functioned as RPE in the RCS rat retina, providing preclinical evidence that either PSC source could be of potential benefit for treating RD. PMID:27006969
VizieR Online Data Catalog: New IR photometric study of Ap and Am stars (Chen+, 2017)

Science.gov (United States)

Chen, P. S.; Liu, J. Y.; Shan, H. G.

2018-05-01

In the General Catalog of Ap and Am stars (Renson & Manfroid 2009, Cat. III/260) 8265 stars are included in which, as Renson & Manfroid (2009, Cat. III/260) described, only 426 stars are of the "well known confirmed sample". We take these 426 stars as our working sample. The cross-identifications of 2MASS/WISE counterparts for all Ap, Am, and HgMn stars listed in this paper are made from Cutri et al. (2012, Cat. II/311) by using the radius of 2 arcsec. All 426 Ap, Am, and HgMn stars have 2MASS and/or WISE counterparts, which are listed in Table 3. The cross-identifications of IRAS counterparts are made according to the positional error ellipse of the source, because it has a 95% confidence level (IRAS Explanatory Supplement, Beichman et al. 1988, Cat. II/274). Finally, 202 stars are found to have the IRAS counterparts from IRAS PSC/FSC, which is listed in Table 4. (5 data files).
Variability Properties of Four Million Sources in the TESS Input Catalog Observed with the Kilodegree Extremely Little Telescope Survey

Science.gov (United States)

Oelkers, Ryan J.; Rodriguez, Joseph E.; Stassun, Keivan G.; Pepper, Joshua; Somers, Garrett; Kafka, Stella; Stevens, Daniel J.; Beatty, Thomas G.; Siverd, Robert J.; Lund, Michael B.; Kuhn, Rudolf B.; James, David; Gaudi, B. Scott

2018-01-01

The Kilodegree Extremely Little Telescope (KELT) has been surveying more than 70% of the celestial sphere for nearly a decade. While the primary science goal of the survey is the discovery of transiting, large-radii planets around bright host stars, the survey has collected more than 106 images, with a typical cadence between 10–30 minutes, for more than four million sources with apparent visual magnitudes in the approximate range 7TESS Input catalog and the AAVSO Variable Star Index to precipitate the follow-up and classification of each source. The catalog is maintained as a living database on the Filtergraph visualization portal at the URL https://filtergraph.com/kelt_vars.
GALEX-SDSS CATALOGS FOR STATISTICAL STUDIES

International Nuclear Information System (INIS)

Budavari, Tamas; Heinis, Sebastien; Szalay, Alexander S.; Nieto-Santisteban, Maria; Bianchi, Luciana; Gupchup, Jayant; Shiao, Bernie; Smith, Myron; Chang Ruixiang; Kauffmann, Guinevere; Morrissey, Patrick; Wyder, Ted K.; Martin, D. Christopher; Barlow, Tom A.; Forster, Karl; Friedman, Peter G.; Schiminovich, David; Milliard, Bruno; Donas, Jose; Seibert, Mark

2009-01-01

We present a detailed study of the Galaxy Evolution Explorer's (GALEX) photometric catalogs with special focus on the statistical properties of the All-sky and Medium Imaging Surveys. We introduce the concept of primaries to resolve the issue of multiple detections and follow a geometric approach to define clean catalogs with well understood selection functions. We cross-identify the GALEX sources (GR2+3) with Sloan Digital Sky Survey (SDSS; DR6) observations, which indirectly provides an invaluable insight into the astrometric model of the UV sources and allows us to revise the band merging strategy. We derive the formal description of the GALEX footprints as well as their intersections with the SDSS coverage along with analytic calculations of their areal coverage. The crossmatch catalogs are made available for the public. We conclude by illustrating the implementation of typical selection criteria in SQL for catalog subsets geared toward statistical analyses, e.g., correlation and luminosity function studies.
Scenarios catalog for the graphical console for analysis of severe accidents visualization of OEs, NAEs and calculation of source term of the NPP-LV

International Nuclear Information System (INIS)

Sandoval V, S.; Mendoza R, M. E.; Tijerina S, F.; Garcia C, T.

2016-09-01

A nuclear power plant is operated at all times within the design criteria of structures, systems and components, and according to the operation technical specifications. For different areas of work of a nuclear power plant is necessary to carry out practices in which is useful to have the prediction of the thermo-hydraulic and radiological progression of scenarios that imply exceeding that design bases, even reaching the damage of the fuel in different degree. During the exercises and drills of the External Plan of Emergency Response, the projection of doses is done to exercise the different tasks of the plan. To make the projection of doses is required to have the radiological source term of the scenario on which is practiced. Because of this, was identified the convenience of having a catalog of scenarios for which the radiological source term was calculated. In 2004, a first version of the catalog was produced for a power of 2027 MW, and in 2011 the catalog was updated for extended power conditions, 2317 MW. Both versions were made using the severe accident simulator MAAP-3B. That catalog consists of a form and an optical storage device. The form contains tables and figures in which the characteristics of the scenario to be practiced are searched and the electronic files of the corresponding radiological source term are located in the storage device. Due to the recent development of the graphical console for analysis of severe accidents, visualization of OEs, NAEs and calculation of the source term for the nuclear power plant of Laguna Verde (NPP-LV) CoGrAAS, the catalog printed was replaced by an electronic catalog for the CoGrAAS. The new catalog retains the philosophy of the previous catalog, constituted by a wide collection of scenarios that involve different circumstances and phenomena, that can be used to practice different tasks during training exercises or simulacrums, and combined with the following advantages: the scenario selection is made from an
NEAR-INFRARED POLARIZATION SOURCE CATALOG OF THE NORTHEASTERN REGIONS OF THE LARGE MAGELLANIC CLOUD

Energy Technology Data Exchange (ETDEWEB)

Kim, Jaeyeong; Pak, Soojong [School of Space Research, Kyung Hee University, 1 Seocheon-dong, Giheung-gu, Yongin, Gyeonggi-do 446-701 (Korea, Republic of); Jeong, Woong-Seob; Park, Won-Kee [Korea Astronomy and Space Science Institute, 776 Daedeok-daero, Yuseong-gu, Daejeon 305-348 (Korea, Republic of); Tamura, Motohide, E-mail: jaeyeong@khu.ac.kr, E-mail: jeongws@kasi.re.kr [The University of Tokyo/National Astronomical Observatory of Japan/Astrobiology Center, 2-21-1 Osawa, Mitaka, Tokyo 181-8588 (Japan)

2016-01-15

We present a near-infrared band-merged photometric and polarimetric catalog for the 39′ × 69′ fields in the northeastern part of the Large Magellanic Cloud (LMC), which were observed using SIRPOL, an imaging polarimeter of the InfraRed Survey Facility. This catalog lists 1858 sources brighter than 14 mag in the H band with a polarization signal-to-noise ratio greater than three in the J, H, or K{sub s} bands. Based on the relationship between the extinction and the polarization degree, we argue that the polarization mostly arises from dichroic extinctions caused by local interstellar dust in the LMC. This catalog allows us to map polarization structures to examine the global geometry of the local magnetic field, and to show a statistical analysis of the polarization of each field to understand its polarization properties. In the selected fields with coherent polarization position angles, we estimate magnetic field strengths in the range of 3−25 μG using the Chandrasekhar–Fermi method. This implies the presence of large-scale magnetic fields on a scale of around 100 parsecs. When comparing mid- and far-infrared dust emission maps, we confirmed that the polarization patterns are well aligned with molecular clouds around the star-forming regions.
Weapon container catalog. Volumes 1 & 2

Energy Technology Data Exchange (ETDEWEB)

Brown, L.A.; Higuera, M.C.

1998-02-01

The Weapon Container Catalog describes H-gear (shipping and storage containers, bomb hand trucks and the ancillary equipment required for loading) used for weapon programs and for special use containers. When completed, the catalog will contain five volumes. Volume 1 for enduring stockpile programs (B53, B61, B83, W62, W76, W78, W80, W84, W87, and W88) and Volume 2, Special Use Containers, are being released. The catalog is intended as a source of information for weapon program engineers and also provides historical information. The catalog also will be published on the SNL Internal Web and will undergo periodic updates.
THE 31 DEG{sup 2} RELEASE OF THE STRIPE 82 X-RAY SURVEY: THE POINT SOURCE CATALOG

Energy Technology Data Exchange (ETDEWEB)

LaMassa, Stephanie M.; Urry, C. Megan; Ananna, Tonima; Civano, Francesca; Marchesi, Stefano; Pecoraro, Robert [Yale Center for Astronomy and Astrophysics, Physics Department, P.O. Box 208120, New Haven, CT 06520 (United States); Cappelluti, Nico; Comastri, Andrea; Brusa, Marcella [INAF-Osservatorio Astronomico di Bologna, via Ranzani 1, I-40127 Bologna (Italy); Böhringer, Hans; Chon, Gayoung [Max-Planck-Institut für extraterrestrische Physik, D-85748 Garching (Germany); Glikman, Eilat [Department of Physics, Middlebury College, Middlebury, VT 05753 (United States); Richards, Gordon [Department of Physics, Drexel University, 3141 Chestnut Street, Philadelphia, PA 19104 (United States); Cardamone, Carie [Department of Math and Science, Wheelock College, 200 Riverway, Boston, MA 02215 (United States); Farrah, Duncan [Department of Physics MC 0435, Virginia Polytechnic Institute and State University, 850 West Campus Drive, Blacksburg, VA 24061 (United States); Gilfanov, Marat [Max-Planck Institut für Astrophysik, Karl-Schwarzschild-Str. 1, Postfach 1317, D-85741 Garching (Germany); Green, Paul [Smithsonian Astrophysical Observatory, 60 Garden Street, Cambridge, MA 02138 (United States); Komossa, S. [Max-Planck-Institut für Radioastronomie, Auf dem Hügel 69, D-53121 Bonn (Germany); Lira, Paulina [Departamento de Astronomia, Universidad de Chile, Camino del Observatorio 1515, Santiago (Chile); Makler, Martin [Centro Brasileiro de Pesquisas Fisicas, Rua Dr Xavier Sigaud 150, Rio de Janeiro, RJ 22290-180 (Brazil); and others

2016-02-01

We release the next installment of the Stripe 82 X-ray survey point-source catalog, which currently covers 31.3 deg{sup 2} of the Sloan Digital Sky Survey (SDSS) Stripe 82 Legacy field. In total, 6181 unique X-ray sources are significantly detected with XMM-Newton (>5σ) and Chandra (>4.5σ). This catalog release includes data from XMM-Newton cycle AO 13, which approximately doubled the Stripe 82X survey area. The flux limits of the Stripe 82X survey are 8.7 × 10{sup −16} erg s{sup −1} cm{sup −2}, 4.7 × 10{sup −15} erg s{sup −1} cm{sup −2}, and 2.1 × 10{sup −15} erg s{sup −1} cm{sup −2} in the soft (0.5–2 keV), hard (2–10 keV), and full bands (0.5–10 keV), respectively, with approximate half-area survey flux limits of 5.4 × 10{sup −15} erg s{sup −1} cm{sup −2}, 2.9 × 10{sup −14} erg s{sup −1} cm{sup −2}, and 1.7 × 10{sup −14} erg s{sup −1} cm{sup −2}. We matched the X-ray source lists to available multi-wavelength catalogs, including updated matches to the previous release of the Stripe 82X survey; 88% of the sample is matched to a multi-wavelength counterpart. Due to the wide area of Stripe 82X and rich ancillary multi-wavelength data, including coadded SDSS photometry, mid-infrared WISE coverage, near-infrared coverage from UKIDSS and VISTA Hemisphere Survey, ultraviolet coverage from GALEX, radio coverage from FIRST, and far-infrared coverage from Herschel, as well as existing ∼30% optical spectroscopic completeness, we are beginning to uncover rare objects, such as obscured high-luminosity active galactic nuclei at high-redshift. The Stripe 82X point source catalog is a valuable data set for constraining how this population grows and evolves, as well as for studying how they interact with the galaxies in which they live.
Mexican Earthquakes and Tsunamis Catalog Reviewed

Science.gov (United States)

Ramirez-Herrera, M. T.; Castillo-Aja, R.

2015-12-01

Today the availability of information on the internet makes online catalogs very easy to access by both scholars and the public in general. The catalog in the "Significant Earthquake Database", managed by the National Center for Environmental Information (NCEI formerly NCDC), NOAA, allows access by deploying tabular and cartographic data related to earthquakes and tsunamis contained in the database. The NCEI catalog is the product of compiling previously existing catalogs, historical sources, newspapers, and scientific articles. Because NCEI catalog has a global coverage the information is not homogeneous. Existence of historical information depends on the presence of people in places where the disaster occurred, and that the permanence of the description is preserved in documents and oral tradition. In the case of instrumental data, their availability depends on the distribution and quality of seismic stations. Therefore, the availability of information for the first half of 20th century can be improved by careful analysis of the available information and by searching and resolving inconsistencies. This study shows the advances we made in upgrading and refining data for the earthquake and tsunami catalog of Mexico since 1500 CE until today, presented in the format of table and map. Data analysis allowed us to identify the following sources of error in the location of the epicenters in existing catalogs: • Incorrect coordinate entry • Place name erroneous or mistaken • Too general data that makes difficult to locate the epicenter, mainly for older earthquakes • Inconsistency of earthquakes and the tsunami occurrence: earthquake's epicenter located too far inland reported as tsunamigenic. The process of completing the catalogs directly depends on the availability of information; as new archives are opened for inspection, there are more opportunities to complete the history of large earthquakes and tsunamis in Mexico. Here, we also present new earthquake and
A SEARCH FOR HYPERLUMINOUS X-RAY SOURCES IN THE XMM-NEWTON SOURCE CATALOG

Energy Technology Data Exchange (ETDEWEB)

Zolotukhin, I.; Webb, N. A.; Godet, O.; Barret, D. [CNRS, IRAP, 9 av. Colonel Roche, BP 44346, F-31028 Toulouse cedex 4 (France); Bachetti, M., E-mail: ivan.zolotukhin@irap.omp.eu [INAF/Osservatorio Astronomico di Cagliari, via della Scienza 5, I-09047 Selargius (Italy)

2016-02-01

We present a new method to identify luminous off-nuclear X-ray sources in the outskirts of galaxies from large public redshift surveys, distinguishing them from foreground and background interlopers. Using the 3XMM-DR5 catalog of X-ray sources and the SDSS DR12 spectroscopic sample of galaxies, with the help of this off-nuclear cross-matching technique, we selected 98 sources with inferred X-ray luminosities in the range 10{sup 41} < L{sub X} < 10{sup 44} erg s{sup −1}, compatible with hyperluminous X-ray objects (HLX). To validate the method, we verify that it allowed us to recover known HLX candidates such as ESO 243–49 HLX–1 and M82 X–1. From a statistical study, we conservatively estimate that up to 71 ± 11 of these sources may be foreground- or background sources, statistically leaving at least 16 that are likely to be HLXs, thus providing support for the existence of the HLX population. We identify two good HLX candidates and using other publicly available data sets, in particular the VLA FIRST in radio, UKIRT Infrared Deep Sky Survey in the near-infrared, GALEX in the ultraviolet and Canada–France–Hawaii Telescope Megacam archive in the optical, we present evidence that these objects are unlikely to be foreground or background X-ray objects of conventional types, e.g., active galactic nuclei, BL Lac objects, Galactic X-ray binaries, or nearby stars. However, additional dedicated X-ray and optical observations are needed to confirm their association with the assumed host galaxies and thus secure their HLX classification.
The new energy management policy: Indonesian PSC-gross-split applied on steam flooding project

Science.gov (United States)

Irham, S.; Julyus, P.

2018-01-01

“SIPY” oil field has been producing oil using steam flooding technology since 1992 under the PSC-Cost-Recovery policy. In 2021, the contract will be finished, and a new agreement must be submitted to the Indonesian government. There are two applied fiscal policies on oil and gas management: PSC-Cost-Recovery and PSC-Gross-Split (introduced in 2017 as the new energy management plan). The contractor must choose between PSC-Cost-Recovery and PSC-Gross-split which makes more profit. The aim of this research is to determine the best oil and gas contract policy for the contractor. The methods are calculating contractor cash flow and comparing the Profitability Indexes. The results of this study are (1) Net Present Values for the PSC-Cost-Recovery and the PSC-Gross-Split are 15 MMUS and 61 MMUS, respectively; and (2) Internal Rate of Return values for the PSC-Cost-Recovery and PSC-Gross-Split are 10% and 11%, respectively. The conclusion is that the Net Present Value and Internal Rate of Return of PSC-Gross-Split are greater than those of PSC-Cost-Recovery, but in Pay Out Time of PSC-Gross-split is longer than Pay Out Time in PSC-Cost-Recovery. Thus, the new energy management policy will be more attractive than PSC-Cost-Recovery.
Generation of iPSC line iPSC-FH2.1 in hypoxic conditions from human foreskin fibroblasts

Directory of Open Access Journals (Sweden)

María Questa

2016-03-01

Full Text Available Human foreskin fibroblasts were used to generate the iPSC line iPSC-FH2.1 using the EF1a-hSTEMCCA-loxP vector expressing OCT4, SOX2, c-MYC and KLF4, in 5% O2 culture conditions. Stemness was confirmed, as was pluripotency both in vivo and in vitro, in normoxia and hypoxia. Human Embryonic Stem Cell (hESC line WA-09 and reprogrammed fibroblast primary culture HFF-FM were used as controls.
2MASS Catalog Server Kit Version 2.1

Science.gov (United States)

Yamauchi, C.

2013-10-01

The 2MASS Catalog Server Kit is open source software for use in easily constructing a high performance search server for important astronomical catalogs. This software utilizes the open source RDBMS PostgreSQL, therefore, any users can setup the database on their local computers by following step-by-step installation guide. The kit provides highly optimized stored functions for positional searchs similar to SDSS SkyServer. Together with these, the powerful SQL environment of PostgreSQL will meet various user's demands. We released 2MASS Catalog Server Kit version 2.1 in 2012 May, which supports the latest WISE All-Sky catalog (563,921,584 rows) and 9 major all-sky catalogs. Local databases are often indispensable for observatories with unstable or narrow-band networks or severe use, such as retrieving large numbers of records within a small period of time. This software is the best for such purposes, and increasing supported catalogs and improvements of version 2.1 can cover a wider range of applications including advanced calibration system, scientific studies using complicated SQL queries, etc. Official page: http://www.ir.isas.jaxa.jp/~cyamauch/2masskit/
Pre-evaluated safe human iPSC-derived neural stem cells promote functional recovery after spinal cord injury in common marmoset without tumorigenicity.

Directory of Open Access Journals (Sweden)

Yoshiomi Kobayashi

Full Text Available Murine and human iPSC-NS/PCs (induced pluripotent stem cell-derived neural stem/progenitor cells promote functional recovery following transplantation into the injured spinal cord in rodents. However, for clinical applicability, it is critical to obtain proof of the concept regarding the efficacy of grafted human iPSC-NS/PCs (hiPSC-NS/PCs for the repair of spinal cord injury (SCI in a non-human primate model. This study used a pre-evaluated "safe" hiPSC-NS/PC clone and an adult common marmoset (Callithrix jacchus model of contusive SCI. SCI was induced at the fifth cervical level (C5, followed by transplantation of hiPSC-NS/PCs at 9 days after injury. Behavioral analyses were performed from the time of the initial injury until 12 weeks after SCI. Grafted hiPSC-NS/PCs survived and differentiated into all three neural lineages. Furthermore, transplantation of hiPSC-NS/PCs enhanced axonal sparing/regrowth and angiogenesis, and prevented the demyelination after SCI compared with that in vehicle control animals. Notably, no tumor formation occurred for at least 12 weeks after transplantation. Quantitative RT-PCR showed that mRNA expression levels of human neurotrophic factors were significantly higher in cultured hiPSC-NS/PCs than in human dermal fibroblasts (hDFs. Finally, behavioral tests showed that hiPSC-NS/PCs promoted functional recovery after SCI in the common marmoset. Taken together, these results indicate that pre-evaluated safe hiPSC-NS/PCs are a potential source of cells for the treatment of SCI in the clinic.
THE ARECIBO LEGACY FAST ALFA SURVEY: THE {alpha}.40 H I SOURCE CATALOG, ITS CHARACTERISTICS AND THEIR IMPACT ON THE DERIVATION OF THE H I MASS FUNCTION

Energy Technology Data Exchange (ETDEWEB)

Haynes, Martha P.; Giovanelli, Riccardo; Martin, Ann M.; Adams, Elizabeth A. K.; Hallenbeck, Gregory; Huang Shan; Papastergis, Emmanouil, E-mail: haynes@astro.cornell.edu, E-mail: riccardo@astro.cornell.edu, E-mail: amartin@astro.cornell.edu, E-mail: betsey@astro.cornell.edu, E-mail: ghallenbeck@astro.cornell.edu, E-mail: shan@astro.cornell.edu [Center for Radiophysics and Space Research, Space Sciences Building, Cornell University, Ithaca, NY 14853 (United States); and others

2011-11-15

We present a current catalog of 21 cm H I line sources extracted from the Arecibo Legacy Fast Arecibo L-band Feed Array (ALFALFA) survey over {approx}2800 deg{sup 2} of sky: the {alpha}.40 catalog. Covering 40% of the final survey area, the {alpha}.40 catalog contains 15,855 sources in the regions 07{sup h}30{sup m} < R.A. < 16{sup h}30{sup m}, +04 Degree-Sign < decl. <+16 Degree-Sign , and +24 Degree-Sign < decl. <+28 Degree-Sign and 22{sup h} < R.A. < 03{sup h}, +14 Degree-Sign < decl. <+16 Degree-Sign , and +24 Degree-Sign < decl. < + 32 Degree-Sign . Of those, 15,041 are certainly extragalactic, yielding a source density of 5.3 galaxies per deg{sup 2}, a factor of 29 improvement over the catalog extracted from the H I Parkes All-Sky Survey. In addition to the source centroid positions, H I line flux densities, recessional velocities, and line widths, the catalog includes the coordinates of the most probable optical counterpart of each H I line detection, and a separate compilation provides a cross-match to identifications given in the photometric and spectroscopic catalogs associated with the Sloan Digital Sky Survey Data Release 7. Fewer than 2% of the extragalactic H I line sources cannot be identified with a feasible optical counterpart; some of those may be rare OH megamasers at 0.16 < z < 0.25. A detailed analysis is presented of the completeness, width-dependent sensitivity function and bias inherent of the {alpha}.40 catalog. The impact of survey selection, distance errors, current volume coverage, and local large-scale structure on the derivation of the H I mass function is assessed. While {alpha}.40 does not yet provide a completely representative sampling of cosmological volume, derivations of the H I mass function using future data releases from ALFALFA will further improve both statistical and systematic uncertainties.
The Bernese atmospheric multiple catalog access tool (BEAMCAT): a tool for users of popular spectral line catalogs

International Nuclear Information System (INIS)

Feist, D.G.Dietrich G.

2004-01-01

Users of spectroscopic data bases in the microwave region quickly realize that each existing spectral line catalog provide only part of the information that they would like to have. As a workaround for this problem, several merged spectral line data bases have been created by different groups. However, these merged data bases are usually very specific for a certain application and are difficult to maintain. The BEAMCAT data base takes a totally new approach that makes it possible to generate merged spectral line catalogs from any number of source catalogs in multiple user-defined formats. The current version of BEAMCAT contains the complete JPL and HITRAN catalog. Other catalogs like GEISA will soon be included, too. As a first application of the BEAMCAT data base, the author conducted a thorough intercomparison of spectral parameters for all the transitions that the JPL catalog and HITRAN have in common. The intercomparison shows that the spectral parameters in the catalogs are by no means identical. While the difference in center frequency is usually small, the differences in line intensity reach from almost exact match to discrepancies of several orders of magnitude. While it cannot be ruled out that some of the lines were matched incorrectly, this intercomparison might be helpful to identify problems with the original catalogs
THE SIMPLE SURVEY: OBSERVATIONS, REDUCTION, AND CATALOG

International Nuclear Information System (INIS)

Damen, M.; Franx, M.; Taylor, E. N.; Labbe, I.; Van Dokkum, P. G.; Muzzin, A.; Brandt, W. N.; Dickinson, M.; Gawiser, E.; Illingworth, G. D.; Kriek, M.; Marchesini, D.; Papovich, C.; Rix, H.-W.

2011-01-01

We present the Spitzer IRAC/MUSYC Public Legacy Survey in the Extended CDF-South (SIMPLE), which consists of deep IRAC observations covering the ∼1600 arcmin 2 area surrounding GOODS-S. The limiting magnitudes of the SIMPLE IRAC mosaics typically are 23.8, 23.6, 21.9, and 21.7, at 3.6 μm, 4.5 μm, 5.8 μm, and 8.0 μm, respectively (5σ total point source magnitudes in AB). The SIMPLE IRAC images are combined with the 10' x 15' GOODS IRAC mosaics in the center. We give detailed descriptions of the observations, data reduction, and properties of the final images, as well as the detection and photometry methods used to build a catalog. Using published optical and near-infrared data from the Multiwavelength Survey by Yale-Chile (MUSYC), we construct an IRAC-selected catalog, containing photometry in UBVRIz'JHK, [3.6 μm], [4.5 μm], [5.8 μm], and [8.0 μm]. The catalog contains 43,782 sources with S/N >5 at 3.6 μm, 19,993 of which have 13-band photometry. We compare this catalog to the publicly available MUSYC and FIREWORKS catalogs and discuss the differences. Using a high signal-to-noise sub-sample of 3391 sources with ([3.6] + [4.5])/2 * >10 11 M sun ) are passively evolving, in agreement with earlier results from surveys covering less area.
The new management policy: Indonesian PSC-Gross split applied on CO2 flooding project

Science.gov (United States)

Irham, S.; Sibuea, S. N.; Danu, A.

2018-01-01

“SIAD” oil field will be developed by CO2 flooding. CO2, a famous pollutant gas, is injected into the oil reservoir to optimize the oil recovery. This technique should be conducted economically according to the energy management policy in Indonesia. In general, Indonesia has two policy contracts on oil and gas: the old one is PSC-Cost-Recovery, and the new one is PSC-Gross-Split (introduced in 2017 as the new energy management plan). The contractor must choose between PSC-Cost-Recovery and PSC-Gross-Split which makes more profit. The aim of this paper is to show the best oil and gas contract policy for the contractor. The methods are calculating and comparing the economic indicators. The result of this study are (1) NPV for the PSC-Cost-Recovery is -46 MUS, while for the PSC-Gross-Split is 73 MUS, and (2) IRR for the PSC-Cost-Recovery is 9%, whereas for the PSC-Gross-Split is 11%. The conclusion is that the NPV and IRR for PSC-Gross-Split are greater than the NPV and IRR of PSC-Cost-Recovery, but POT in PSC-Gross-split is longer than POT in PSC-Cost-Recovery. Thus, in this case, the new energy policy contract can be applied for CO2 flooding technology since it yields higher economic indicators than its antecendent.
X-RAY PROPERTIES OF THE NORTHERN GALACTIC CAP SOURCES IN THE 58 MONTH SWIFT/BAT CATALOG

International Nuclear Information System (INIS)

Vasudevan, Ranjan V.; Mushotzky, Richard F.; Shimizu, Thomas T.; Brandt, William N.; Schneider, Donald P.; Nousek, John; Winter, Lisa M.; Baumgartner, Wayne H.

2013-01-01

We present a detailed X-ray spectral analysis of the non-beamed, hard X-ray selected active galactic nuclei (AGNs) in the northern Galactic cap of the 58 month Swift Burst Alert Telescope (Swift/BAT) catalog, consisting of 100 AGNs with b > 50°. This sky area has excellent potential for further dedicated study due to a wide range of multi-wavelength data that are already available, and we propose it as a low-redshift analog to the 'deep field' observations of AGNs at higher redshifts (e.g., CDFN/S, COSMOS, Lockman Hole). We present distributions of luminosity, absorbing column density, and other key quantities for the catalog. We use a consistent approach to fit new and archival X-ray data gathered from XMM-Newton, Swift/XRT, ASCA, and Swift/BAT. We probe to deeper redshifts than the 9 month BAT catalog ((z) = 0.043 compared to (z) = 0.03 for the 9 month catalog), and uncover a broader absorbing column density distribution. The fraction of obscured (log N H ≥ 22) objects in the sample is ∼60%, and 43%-56% of the sample exhibits 'complex' 0.4-10 keV spectra. We present the properties of iron lines, soft excesses, and ionized absorbers for the subset of objects with sufficient signal-to-noise ratio. We reinforce previous determinations of the X-ray Baldwin (Iwasawa-Taniguchi) effect for iron Kα lines. We also identify two distinct populations of sources; one in which a soft excess is well-detected and another where the soft excess is undetected, suggesting that the process responsible for producing the soft excess is not at work in all AGNs. The fraction of Compton-thick sources (log N H > 24.15) in our sample is ∼9%. We find that 'hidden/buried AGNs' (which may have a geometrically thick torus or emaciated scattering regions) constitute ∼14% of our sample, including seven objects previously not identified as hidden. Compton reflection is found to be important in a large fraction of our sample using joint XMM-Newton+BAT fits ((R) = 2.7 ± 0.75), indicating
THE BOLOCAM GALACTIC PLANE SURVEY. II. CATALOG OF THE IMAGE DATA

International Nuclear Information System (INIS)

Rosolowsky, Erik; Dunham, Miranda K.; Evans, Neal J.; Harvey, Paul; Ginsburg, Adam; Bally, John; Battersby, Cara; Glenn, Jason; Stringfellow, Guy S.; Bradley, E. Todd; Aguirre, James; Cyganowski, Claudia; Dowell, Darren; Drosback, Meredith; Walawender, Josh; Williams, Jonathan P.

2010-01-01

We present a catalog of 8358 sources extracted from images produced by the Bolocam Galactic Plane Survey (BGPS). The BGPS is a survey of the millimeter dust continuum emission from the northern Galactic plane. The catalog sources are extracted using a custom algorithm, Bolocat, which was designed specifically to identify and characterize objects in the large-area maps generated from the Bolocam instrument. The catalog products are designed to facilitate follow-up observations of these relatively unstudied objects. The catalog is 98% complete from 0.4 Jy to 60 Jy over all object sizes for which the survey is sensitive ( -2.4±0.1 and that the mean Galactic latitude for sources is significantly below the midplane: (b) = (-0. 0 095 ± 0. 0 001).

Neonatal Transplantation Confers Maturation of PSC-Derived Cardiomyocytes Conducive to Modeling Cardiomyopathy

Directory of Open Access Journals (Sweden)

Gun-Sik Cho

2017-01-01

Full Text Available Summary: Pluripotent stem cells (PSCs offer unprecedented opportunities for disease modeling and personalized medicine. However, PSC-derived cells exhibit fetal-like characteristics and remain immature in a dish. This has emerged as a major obstacle for their application for late-onset diseases. We previously showed that there is a neonatal arrest of long-term cultured PSC-derived cardiomyocytes (PSC-CMs. Here, we demonstrate that PSC-CMs mature into adult CMs when transplanted into neonatal hearts. PSC-CMs became similar to adult CMs in morphology, structure, and function within a month of transplantation into rats. The similarity was further supported by single-cell RNA-sequencing analysis. Moreover, this in vivo maturation allowed patient-derived PSC-CMs to reveal the disease phenotype of arrhythmogenic right ventricular cardiomyopathy, which manifests predominantly in adults. This study lays a foundation for understanding human CM maturation and pathogenesis and can be instrumental in PSC-based modeling of adult heart diseases. : Pluripotent stem cell (PSC-derived cells remain fetal like, and this has become a major impediment to modeling adult diseases. Cho et al. find that PSC-derived cardiomyocytes mature into adult cardiomyocytes when transplanted into neonatal rat hearts. This method can serve as a tool to understand maturation and pathogenesis in human cardiomyocytes. Keywords: cardiomyocyte, maturation, iPS, cardiac progenitor, neonatal, disease modeling, cardiomyopathy, ARVC, T-tubule, calcium transient, sarcomere shortening
Neonatal Transplantation Confers Maturation of PSC-Derived Cardiomyocytes Conducive to Modeling Cardiomyopathy.

Science.gov (United States)

Cho, Gun-Sik; Lee, Dong I; Tampakakis, Emmanouil; Murphy, Sean; Andersen, Peter; Uosaki, Hideki; Chelko, Stephen; Chakir, Khalid; Hong, Ingie; Seo, Kinya; Chen, Huei-Sheng Vincent; Chen, Xiongwen; Basso, Cristina; Houser, Steven R; Tomaselli, Gordon F; O'Rourke, Brian; Judge, Daniel P; Kass, David A; Kwon, Chulan

2017-01-10

Pluripotent stem cells (PSCs) offer unprecedented opportunities for disease modeling and personalized medicine. However, PSC-derived cells exhibit fetal-like characteristics and remain immature in a dish. This has emerged as a major obstacle for their application for late-onset diseases. We previously showed that there is a neonatal arrest of long-term cultured PSC-derived cardiomyocytes (PSC-CMs). Here, we demonstrate that PSC-CMs mature into adult CMs when transplanted into neonatal hearts. PSC-CMs became similar to adult CMs in morphology, structure, and function within a month of transplantation into rats. The similarity was further supported by single-cell RNA-sequencing analysis. Moreover, this in vivo maturation allowed patient-derived PSC-CMs to reveal the disease phenotype of arrhythmogenic right ventricular cardiomyopathy, which manifests predominantly in adults. This study lays a foundation for understanding human CM maturation and pathogenesis and can be instrumental in PSC-based modeling of adult heart diseases. Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.
THE CANADA-FRANCE-HAWAII TELESCOPE LEGACY SURVEY: STACKED IMAGES AND CATALOGS

International Nuclear Information System (INIS)

Gwyn, Stephen D. J.

2012-01-01

This paper describes the image stacks and catalogs of the Canada-France-Hawaii Telescope Legacy Survey produced using the MegaPipe data pipeline at the Canadian Astronomy Data Centre. The Legacy Survey is divided into two parts. The Deep Survey consists of four fields each of 1 deg 2 , with magnitude limits (50% completeness for point sources) of u = 27.5, g = 27.9, r = 27.7, i = 27.4, and z = 26.2. It contains 1.6 × 10 6 sources. The Wide Survey consists of 150 deg 2 split over four fields, with magnitude limits of u = 26.0, g = 26.5, r = 25.9, i = 25.7, and z = 24.6. It contains 3 × 10 7 sources. This paper describes the calibration, image stacking, and catalog generation process. The images and catalogs are available on the web through several interfaces: normal image and text file catalog downloads, a 'Google Sky' interface, an image cutout service, and a catalog database query service.
MIT/OSO 7 catalog of x-ray sources: intensities, spectra, and long-term variability

International Nuclear Information System (INIS)

Markert, T.H.; Winkler, P.F.; Laird, F.N.; Clark, G.W.; Hearn, D.R.; Sprott, G.F.; Li, F.K.; Bradt, H.V.; Lewin, W.H.G.; Schnopper, H.W.

1979-01-01

This paper is a summary of the observations of the cosmic X-ray sky performed by the MIT 1--40 KeV X-ray detectors on the OSO 7 between 1971 October and 1973 May. Specifically, we have computed the mean intensities or upper limits of all third Uhuru or OSO 7 cataloged sources (185 sources) in the 3--10 KeV range. For those sources for which a statistically significant (>20) intensity was found in the 3--10 KeV band (138 sources), further intensity determinations were made in the 1--15 KeV, 1--6 KeV, and 15--40 KeV energy bands. We have provided graphs and other simple techniques to aid the user in converting the observed counting rates to convenient units and in determining spectral parameters. Finally, we have plotted long-term light curves (counting rates in one or more energy bands as a function of time) for 86 of the brighter sources
Neonatal Transplantation Confers Maturation of PSC-Derived Cardiomyocytes Conducive to Modeling Cardiomyopathy

OpenAIRE

Cho, Gun-Sik; Lee, Dong I.; Tampakakis, Emmanouil; Murphy, Sean; Andersen, Peter; Uosaki, Hideki; Chelko, Stephen; Chakir, Khalid; Hong, Ingie; Seo, Kinya; Vincent Chen, Huei-Sheng; Chen, Xiongwen; Basso, Cristina; Houser, Steven R.; Tomaselli, Gordon F.

2017-01-01

Summary: Pluripotent stem cells (PSCs) offer unprecedented opportunities for disease modeling and personalized medicine. However, PSC-derived cells exhibit fetal-like characteristics and remain immature in a dish. This has emerged as a major obstacle for their application for late-onset diseases. We previously showed that there is a neonatal arrest of long-term cultured PSC-derived cardiomyocytes (PSC-CMs). Here, we demonstrate that PSC-CMs mature into adult CMs when transplanted into neonata...
Web catalog of oceanographic data using GeoNetwork

Science.gov (United States)

Marinova, Veselka; Stefanov, Asen

2017-04-01

Most of the data collected, analyzed and used by Bulgarian oceanographic data center (BgODC) from scientific cruises, argo floats, ferry boxes and real time operating systems are spatially oriented and need to be displayed on the map. The challenge is to make spatial information more accessible to users, decision makers and scientists. In order to meet this challenge, BgODC concentrate its efforts on improving dynamic and standardized access to their geospatial data as well as those from various related organizations and institutions. BgODC currently is implementing a project to create a geospatial portal for distributing metadata and search, exchange and harvesting spatial data. There are many open source software solutions able to create such spatial data infrastructure (SDI). Finally, the GeoNetwork open source is chosen, as it is already widespread. This software is free, effective and "cheap" solution for implementing SDI at organization level. It is platform independent and runs under many operating systems. Filling of the catalog goes through these practical steps: • Managing and storing data reliably within MS SQL spatial data base; • Registration of maps and data of various formats and sources in GeoServer (most popular open source geospatial server embedded with GeoNetwork) ; • Filling added meta data and publishing geospatial data at the desktop of GeoNetwork. GeoServer and GeoNetwork are based on Java so they require installing of a servlet engine like Tomcat. The experience gained from the use of GeoNetwork Open Source confirms that the catalog meets the requirements for data management and is flexible enough to customize. Building the catalog facilitates sustainable data exchange between end users. The catalog is a big step towards implementation of the INSPIRE directive due to availability of many features necessary for producing "INSPIRE compliant" metadata records. The catalog now contains all available GIS data provided by BgODC for Internet
Engineering-derived approaches for iPSC preparation, expansion, differentiation and applications.

Science.gov (United States)

Li, Yang; Li, Ling; Chen, Zhi-Nan; Gao, Ge; Yao, Rui; Sun, Wei

2017-07-31

Remarkable achievements have been made since induced pluripotent stem cells (iPSCs) were first introduced in 2006. Compared with non-pluripotent stem cells, iPSC research faces several additional complexities, such as the choice of extracellular matrix proteins, growth and differentiation factors, as well as technical challenges related to self-renewal and directed differentiation. Overcoming these challenges requires the integration of knowledge and technologies from multiple fields including cell biology, biomaterial science, engineering, physics and medicine. Here, engineering-derived iPSC approaches are reviewed according to three aspects of iPSC studies: preparation, expansion, differentiation and applications. Engineering strategies, such as 3D systems establishment, cell-matrix mechanics and the regulation of biophysical and biochemical cues, together with engineering techniques, such as 3D scaffolds, cell microspheres and bioreactors, have been applied to iPSC studies and have generated insightful results and even mini-organs such as retinas, livers and intestines. Specific results are given to demonstrate how these approaches impact iPSC behavior, and related mechanisms are discussed. In addition, cell printing technologies are presented as an advanced engineering-derived approach since they have been applied in both iPSC studies and the construction of diverse tissues and organs. Further development and possible innovations of cell printing technologies are presented in terms of creating complex and functional iPSC-derived living tissues and organs.
9+ Years of CALIOP PSC Data: An Evolving Climatology

Science.gov (United States)

Pitts, Michael C.; Poole, Lamont R.

2015-01-01

Polar stratospheric clouds (PSCs) play key roles in the springtime chemical depletion of ozone at high latitudes. PSC particles provide sites for heterogeneous chemical reactions that transform stable chlorine and bromine reservoir species into highly reactive ozone-destructive forms. Furthermore, large nitric acid trihydrate (NAT) PSC particles can irreversibly redistribute odd nitrogen through gravitational sedimentation, which prolongs the ozone depletion process by slowing the reformation of the stable chlorine reservoirs. However, there are still significant gaps in our understanding of PSC processes, particularly concerning the details of NAT particle formation. Spaceborne observations from the CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization) lidar on the CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations) satellite are providing a rich new dataset for studying PSCs on unprecedented vortex-wide scales. In this paper, we examine the vertical and spatial distribution of PSCs in the Antarctic and Arctic on vortex-wide scales for entire PSC seasons over the more than nine-year data record.
VizieR Online Data Catalog: Classification of 2XMM variable sources (Lo+, 2014)

Science.gov (United States)

Lo, K. K.; Farrell, S.; Murphy, T.; Gaensler, B. M.

2017-06-01

The 2XMMi-DR2 catalog (Cat. IX/40) consists of observations made with the XMM-Newton satellite between 2000 and 2008 and covers a sky area of about 420 deg2. The observations were made using the European Photon Imaging Camera (EPIC) that consists of three CCD cameras - pn, MOS1, and MOS2 - and covers the energy range from 0.2 keV to 12 keV. There are 221012 unique sources in 2XMM-DR2, of which 2267 were flagged as variable by the XMM processing pipeline (Watson et al. 2009, J/A+A/493/339). The variability test used by the pipeline is a {Chi}2 test against the null hypothesis that the source flux is constant, with the probability threshold set at 10-5. (1 data file).
VizieR Online Data Catalog: Infrared-faint radio sources catalog (Collier+, 2014)

Science.gov (United States)

Collier, J. D.; Banfield, J. K.; Norris, R. P.; Schnitzeler, D. H. F. M.; Kimball, A. E.; Filipovic, M. D.; Jarrett, T. H.; Lonsdale, C. J.; Tothill, N. F. H.

2014-11-01

The 20cm radio data come from the Unified Radio Catalog (URC) compiled by Kimball & Ivezic (2008AJ....136..684K). This radio catalogue combines data from the National Radio Astronomy Observatory (NRAO) VLA Sky Survey (NVSS; Condon et al., 1998, Cat. VIII/65), Faint Images of the Radio Sky at Twenty Centimeters (FIRST; Becker, White & Helfand, 1995, cat. VIII/92), Green Bank 6cm survey (GB6; Gregory et al., 1996, Cat. VIII/40), the Westerbork Northern Sky Survey (WENSS; Rengelink et al. 1997; de Bruyn et al. 2000, Cat. VIII/62) and the Sloan Digital Sky Survey Data Release 6 (SDSS DR6; Adelman-McCarthy et al., 2008, Cat. II/282). We use updated NVSS and FIRST data from the URC version 2.0 (Kimball & Ivezic, in preparation), which includes a number of new sources as well as updated positions and flux densities. The IR data come from WISE (Wright et al. (WISE Team) 2009, Cat. II/311), which is an all-sky survey centred at 3.4, 4.6, 12 and 22um (referred to as bands W1, W2, W3 and W4), with respective angular resolutions of 6.1, 6.4, 6.5 and 12.0-arcsec (full width at half-maximum, FWHM), and typical 5σ sensitivity levels of 0.08, 0.11, 1 and 6mJy, with sensitivity increasing towards the ecliptic poles. (1 data file).
The Einstein Observatory catalog of IPC x ray sources. Volume 7E: Right ascension range 20h 00m to 23h 59m

Science.gov (United States)

Harris, D. E.; Forman, W.; Gioia, I. M.; Hale, J. A.; Harnden, F. R., Jr.; Jones, C.; Karakashian, T.; Maccacaro, T.; Mcsweeney, J. D.; Primini, F. A.

1993-01-01

The Einstein Observatory (HEAO-2, launched November 13, 1978) achieved radically improved sensitivity over previous x-ray missions through the use of focusing optics which simultaneously afforded greatly reduced background and produced true images. During its 2.5-yr mission, the Einstein X-Ray Telescope was pointed toward some 5,000 celestial targets, most of which were detected, and discovered several thousand additional 'serendipitous' sources in the observed fields. This catalog contains contour diagrams and source data, obtained with the imaging proportional counter in the 0.16 to 3.5 keV energy band, and describes methods for recovering upper limits for any sky position within the observed images. The main catalog consists of six volumes (numbered 2 through 7) of right ascension ordered pages, each containing data for one observation. Along with the primary documentation describing how the catalog was constructed, volume 1 contains a complete source list, results for merged fields, a reference system to published papers, and data useful for calculating upper limits and fluxes.
The Einstein Observatory catalog of IPC x ray sources. Volume 2E: Right ascension range 00h 00m to 03h 59m

Science.gov (United States)

Harris, D. E.; Forman, W.; Gioia, I. M.; Hale, J. A.; Harnden, F. R., Jr.; Jones, C.; Karakashian, T.; Maccacaro, T.; Mcsweeney, J. D.; Primini, F. A.

1993-01-01

The Einstein Observatory (HEAO-2, launched November 13, 1978) achieved radically improved sensitivity over previous x-ray missions through the use of focusing optics which simultaneously afforded greatly reduced background and produced true images. During its 2.5-yr mission, the Einstein X-Ray Telescope was pointed toward some 5,000 celestial targets, most of which were detected, and discovered several thousand additional 'serendipitous' sources in the observed fields. This catalog contains contour diagrams and source data, obtained with the imaging proportional counter in the 0.16 to 3.5 keV energy band, and describes methods for recovering upper limits for any sky position within the observed images. The main catalog consists of six volumes (numbered 2 through 7) of right ascension ordered pages, each containing data for one observation. Along with the primary documentation describing how the catalog was constructed, volume 1 contains a complete source list, results for merged fields, a reference system to published papers and data useful for calculating upper limits and fluxes.
The Einstein Observatory catalog of IPC x ray sources. Volume 5E: Right ascension range 12h 00m to 15h 59m

Science.gov (United States)

Harris, D. E.; Forman, W.; Gioia, I. M.; Hale, J. A.; Harnden, F. R., Jr.; Jones, C.; Karakashian, T.; Maccacaro, T.; Mcsweeney, J. D.; Primini, F. A.

1993-01-01

The Einstein Observatory (HEAO-2, launched November 13, 1978) achieved radically improved sensitivity over previous x-ray missions through the use of focusing optics, which simultaneously afforded greatly reduced background and produced true images. During its 2.5-yr mission, the Einstein X-Ray Telescope was pointed toward some 5,000 celestial targets, most of which were detected, and discovered several thousand additional 'serendipitous' sources in the observed fields. This catalog contains contour diagrams and source data, obtained with the imaging proportional counter in the 0.16 to 3.5 keV energy band, and describes methods for recovering upper limits for any sky position within the observed images. The main catalog consists of six volumes (numbered 2 through 7) of right ascension ordered pages, each containing data for one observation. Along with the primary documentation describing how the catalog was constructed, volume 1 contains a complete source list, results for merged fields, a reference system to published papers, and data useful for calculating upper limits and fluxes.
The Einstein Observatory catalog of IPC x ray sources. Volume 3E: Right ascension range 04h 00m to 07h 59m

Science.gov (United States)

Harris, D. E.; Forman, W.; Gioia, I. M.; Hale, J. A.; Harnden, F. R., Jr.; Jones, C.; Karakashian, T.; Maccacaro, T.; Mcsweeney, J. D.; Primini, F. A.

1993-01-01

The Einstein Observatory (HEAO-2, launched November 13, 1978) achieved radically improved sensitivity over previous x-ray missions through the use of focusing optics which simultaneously afforded greatly reduced background and produced true images. During its 2.5-yr mission, the Einstein X-Ray Telescope was pointed toward some 5,000 celestial targets, most of which were detected, and discovered several thousand additional 'serendipitous' sources in the observed fields. This catalog contains contour diagrams and source data, obtained with the imaging proportional counter in the 0.16 to 3.5 keV energy band, and describes methods for recovering upper limits for any sky position within the observed images. The main catalog consists of six volumes (numbered 2 through 7) of right ascension ordered pages, each containing data for one observation. Along with the primary documentation describing how the catalog was constructed, volume 1 contains a complete source list, results for merged fields, a reference system to published papers and data useful for calculating upper limits and fluxes.
The Einstein Observatory catalog of IPC x ray sources. Volume 6E: Right ascension range 16h 00m to 19h 59m

Science.gov (United States)

Harris, D. E.; Forman, W.; Gioia, I. M.; Hale, J. A.; Harnden, F. R., Jr.; Jones, C.; Karakashian, T.; Maccacaro, T.; Mcsweeney, J. D.; Primini, F. A.

1993-01-01

The Einstein Observatory (HEAO-2 launched November 13, 1978) achieved radically improved sensitivity over previous x-ray missions through the use of focusing optics, which simultaneously afforded greatly reduced background and produced true images. During its 2.5-yr mission, the Einstein X-Ray Telescope was pointed toward some 5,000 celestial targets, most of which were detected, and discovered several thousand additional 'serendipitous' sources in the observed fields. This catalog contains contour diagrams and source data, obtained with the imaging proportional counter in the 0.16 to 3.5 keV energy band, and describes methods for recovering upper limits for any sky position within the observed images. The main catalog consists of six volumes (numbered 2 through 7) of right ascension ordered pages, each containing data for one observation. Along with the primary documentation describing how the catalog was constructed, volume 1 contains a complete source list, results for merged fields, a reference system to published papers, and data useful for calculating upper limits and fluxes.
The Einstein Observatory catalog of IPC x ray sources. Volume 4E: Right ascension range 08h 00m to 11h 59m

Science.gov (United States)

Harris, D. E.; Forman, W.; Gioia, I. M.; Hale, J. A.; Harnden, F. R., Jr.; Jones, C.; Karakashian, T.; Maccacaro, T.; Mcsweeney, J. D.; Primini, F. A.

1993-01-01

The Einstein Observatory (HEAO-2, launched November 13, 1978) achieved radically improved sensitivity over previous x-ray missions through the use of focusing optics which simultaneously afforded greatly reduced background and produced true images. During its 2.5-yr mission, the Einstein X-Ray Telescope was pointed toward some 5,000 celestial targets, most of which were detected, and discovered several thousand additional 'serendipitous' sources in the observed fields. This catalog contains contour diagrams and source data, obtained with the imaging proportional counter in the 0.16 to 3.5 keV energy band, and describes methods for recovering upper limits for any sky position within the observed images, The main catalog consists of six volumes (numbered 2 through 7) of right ascension ordered pages, each containing data for one observation. Along with the primary documentaion describing how the catalog was constructed, volume 1 contains a complete source list, results for merged fields, a reference system to published papers, and data useful for calculating upper limits and fluxes.
DOUBLE STARS IN THE USNO CCD ASTROGRAPHIC CATALOG

Energy Technology Data Exchange (ETDEWEB)

Hartkopf, William I.; Mason, Brian D.; Finch, Charlie T.; Zacharias, Norbert; Wycoff, Gary L.; Hsu, Danley, E-mail: wih@usno.navy.mil, E-mail: bdm@usno.navy.mil, E-mail: finch@usno.navy.mil, E-mail: nz@usno.navy.mil [US Naval Observatory, Washington, DC 20392 (United States)

2013-10-01

The newly completed Fourth USNO CCD Astrographic Catalog (UCAC4) has proven to be a rich source of double star astrometry and photometry. Following initial comparisons of UCAC4 results against those obtained by speckle interferometry, the UCAC4 catalog was matched against known double stars in the Washington Double Star Catalog in order to provide additional differential astrometry and photometry for these pairs. Matches to 58,131 pairs yielded 61,895 astrometric and 68,935 photometric measurements. Finally, a search for possible new common proper motion (CPM) pairs was made using new UCAC4 proper motion data; this resulted in 4755 new potential CPM doubles (and an additional 27,718 astrometric and photometric measures from UCAC and other sources)
Catalog of 3 < z < 5.5 Quasar Candidates Selected among XMM-Newton Sources and Its Spectroscopic Verification

Energy Technology Data Exchange (ETDEWEB)

Khorunzhev, Georgii; Sazonov, Sergey; Burenin, Rodion [High Energy Astrophysics, Space Research Institute, Russian Academy of Sciences, Moscow (Russian Federation); Eselevich, Maxim, E-mail: horge@iki.rssi.ru [Laboratory of Infrared Methods in Astrophysics, Institute of Solar-Terrestrial Physics, Russian Academy of Sciences, Irkutsk (Russian Federation)

2017-11-13

We have compiled a catalog of 903 quasar candidates (including known quasars) at 3 < z < 5.5 selected among X-ray sources from the XMM-Newton serendipitous survey (3XMM-DR4 catalog). We used photometric SDSS, 2MASS, and WISE data to select the objects. The surface number density of objects in our sample exceeds that in the SDSS spectroscopic quasar sample at the same redshifts by a factor of 1.5. We have performed spectroscopic observations of a subsample of new quasar candidates using a new low- and medium-resolution spectrograph at the 1.6-m AZT-33IK telescope (Mondy, Russia) and demonstrated that the purity of these candidates is about 65%. We have discovered one of the most distant (z = 5.08) X-ray selected quasars.
Catalog of 3 < z < 5.5 Quasar Candidates Selected among XMM-Newton Sources and Its Spectroscopic Verification

Directory of Open Access Journals (Sweden)

Georgii Khorunzhev

2017-11-01

Full Text Available We have compiled a catalog of 903 quasar candidates (including known quasars at 3 < z < 5.5 selected among X-ray sources from the XMM-Newton serendipitous survey (3XMM-DR4 catalog. We used photometric SDSS, 2MASS, and WISE data to select the objects. The surface number density of objects in our sample exceeds that in the SDSS spectroscopic quasar sample at the same redshifts by a factor of 1.5. We have performed spectroscopic observations of a subsample of new quasar candidates using a new low- and medium-resolution spectrograph at the 1.6-m AZT-33IK telescope (Mondy, Russia and demonstrated that the purity of these candidates is about 65%. We have discovered one of the most distant (z = 5.08 X-ray selected quasars.
OCRWM [Office of Civilian Radioactive Waste Management] publications catalog

International Nuclear Information System (INIS)

1989-08-01

The US Department of Energy's (DOE) Office of Civilian Radioactive Waste Management (OCRWM) is publishing this catalog to provide citations of selected technical and public information on the subject of high-level radioactive waste management. The catalog is a resource and reference tool that is updated and printed periodically. The online catalog is available for review through OCRWM's Product Record System (PRS) and is available to the public. The printed catalog version is suitable for libraries and those individuals needing either a broad base of information or a particular source; the computerized catalog version provides the most current information resources available, since updates to citations are made as they are received. The number of documents suitable for listing in this catalog is expected to grow significantly each year

Gaucher iPSC-derived macrophages produce elevated levels of inflammatory mediators and serve as a new platform for therapeutic development.

Science.gov (United States)

Panicker, Leelamma M; Miller, Diana; Awad, Ola; Bose, Vivek; Lun, Yu; Park, Tea Soon; Zambidis, Elias T; Sgambato, Judi A; Feldman, Ricardo A

2014-09-01

Gaucher disease (GD) is an autosomal recessive disorder caused by mutations in the acid β-glucocerebrosidase (GCase; GBA) gene. The hallmark of GD is the presence of lipid-laden Gaucher macrophages, which infiltrate bone marrow and other organs. These pathological macrophages are believed to be the sources of elevated levels of inflammatory mediators present in the serum of GD patients. The alteration in the immune environment caused by GD is believed to play a role in the increased risk of developing multiple myeloma and other malignancies in GD patients. To determine directly whether Gaucher macrophages are abnormally activated and whether their functional defects can be reversed by pharmacological intervention, we generated GD macrophages by directed differentiation of human induced pluripotent stem cells (hiPSC) derived from patients with types 1, 2, and 3 GD. GD hiPSC-derived macrophages expressed higher levels of tumor necrosis factor α, IL-6, and IL-1β than control cells, and this phenotype was exacerbated by treatment with lipopolysaccharide. In addition, GD hiPSC macrophages exhibited a striking delay in clearance of phagocytosed red blood cells, recapitulating the presence of red blood cell remnants in Gaucher macrophages from bone marrow aspirates. Incubation of GD hiPSC macrophages with recombinant GCase, or with the chaperones isofagomine and ambroxol, corrected the abnormal phenotypes of GD macrophages to an extent that reflected their known clinical efficacies. We conclude that Gaucher macrophages are the likely source of the elevated levels of inflammatory mediators in the serum of GD patients and that GD hiPSC are valuable new tools for studying disease mechanisms and drug discovery. © 2014 AlphaMed Press.
Can gravity waves significantly impact PSC occurrence in the Antarctic?

Directory of Open Access Journals (Sweden)

R. M. Woollands

2009-11-01

Full Text Available A combination of POAM III aerosol extinction and CHAMP RO temperature measurements are used to examine the role of atmospheric gravity waves in the formation of Antarctic Polar Stratospheric Clouds (PSCs. POAM III aerosol extinction observations and quality flag information are used to identify Polar Stratospheric Clouds using an unsupervised clustering algorithm.

A PSC proxy, derived by thresholding Met Office temperature analyses with the PSC Type Ia formation temperature (T_NAT, shows general agreement with the results of the POAM III analysis. However, in June the POAM III observations of PSC are more abundant than expected from temperature threshold crossings in five out of the eight years examined. In addition, September and October PSC identified using temperature thresholding is often significantly higher than that derived from POAM III; this observation probably being due to dehydration and denitrification. Comparison of the Met Office temperature analyses with corresponding CHAMP observations also suggests a small warm bias in the Met Office data in June. However, this bias cannot fully explain the differences observed.

Analysis of CHAMP data indicates that temperature perturbations associated with gravity waves may partially explain the enhanced PSC incidence observed in June (relative to the Met Office analyses. For this month, approximately 40% of the temperature threshold crossings observed using CHAMP RO data are associated with small-scale perturbations. Examination of the distribution of temperatures relative to T_NAT shows a large proportion of June data to be close to this threshold, potentially enhancing the importance of gravity wave induced temperature perturbations. Inspection of the longitudinal structure of PSC occurrence in June 2005 also shows that regions of enhancement are geographically associated with the Antarctic Peninsula; a known mountain wave "hotspot". The
Radio Follow-up on All Unassociated Gamma-Ray Sources from the Third Fermi Large Area Telescope Source Catalog

Energy Technology Data Exchange (ETDEWEB)

Schinzel, Frank K. [National Radio Astronomy Observatory, P.O. Box O, Socorro, NM 87801 (United States); Petrov, Leonid [Astrogeo Center, Falls Church, VA 22043 (United States); Taylor, Gregory B. [Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM 87131 (United States); Edwards, Philip G., E-mail: fschinze@nrao.edu [CSIRO Astronomy and Space Science, P.O. Box 76, Epping, 1710 NSW (Australia)

2017-04-01

The third Fermi Large Area Telescope γ -ray source catalog (3FGL) contains over 1000 objects for which there is no known counterpart at other wavelengths. The physical origin of the γ -ray emission from those objects is unknown. Such objects are commonly referred to as unassociated and mostly do not exhibit significant γ -ray flux variability. We performed a survey of all unassociated γ -ray sources found in 3FGL using the Australia Telescope Compact Array and Very Large Array in the range 4.0–10.0 GHz. We found 2097 radio candidates for association with γ -ray sources. The follow-up with very long baseline interferometry for a subset of those candidates yielded 142 new associations with active galactic nuclei that are γ -ray sources, provided alternative associations for seven objects, and improved positions for another 144 known associations to the milliarcsecond level of accuracy. In addition, for 245 unassociated γ -ray sources we did not find a single compact radio source above 2 mJy within 3 σ of their γ -ray localization. A significant fraction of these empty fields, 39%, are located away from the Galactic plane. We also found 36 extended radio sources that are candidates for association with a corresponding γ -ray object, 19 of which are most likely supernova remnants or H ii regions, whereas 17 could be radio galaxies.
NOAA's Data Catalog and the Federal Open Data Policy

Science.gov (United States)

Wengren, M. J.; de la Beaujardiere, J.

2014-12-01

The 2013 Open Data Policy Presidential Directive requires Federal agencies to create and maintain a 'public data listing' that includes all agency data that is currently or will be made publicly-available in the future. The directive requires the use of machine-readable and open formats that make use of 'common core' and extensible metadata formats according to the best practices published in an online repository called 'Project Open Data', to use open licenses where possible, and to adhere to existing metadata and other technology standards to promote interoperability. In order to meet the requirements of the Open Data Policy, the National Oceanic and Atmospheric Administration (NOAA) has implemented an online data catalog that combines metadata from all subsidiary NOAA metadata catalogs into a single master inventory. The NOAA Data Catalog is available to the public for search and discovery, providing access to the NOAA master data inventory through multiple means, including web-based text search, OGC CS-W endpoint, as well as a native Application Programming Interface (API) for programmatic query. It generates on a daily basis the Project Open Data JavaScript Object Notation (JSON) file required for compliance with the Presidential directive. The Data Catalog is based on the open source Comprehensive Knowledge Archive Network (CKAN) software and runs on the Amazon Federal GeoCloud. This presentation will cover topics including mappings of existing metadata in standard formats (FGDC-CSDGM and ISO 19115 XML ) to the Project Open Data JSON metadata schema, representation of metadata elements within the catalog, and compatible metadata sources used to feed the catalog to include Web Accessible Folder (WAF), Catalog Services for the Web (CS-W), and Esri ArcGIS.com. It will also discuss related open source technologies that can be used together to build a spatial data infrastructure compliant with the Open Data Policy.
The MIT/OSO 7 catalog of X-ray sources - Intensities, spectra, and long-term variability

Science.gov (United States)

Markert, T. H.; Laird, F. N.; Clark, G. W.; Hearn, D. R.; Sprott, G. F.; Li, F. K.; Bradt, H. V.; Lewin, W. H. G.; Schnopper, H. W.; Winkler, P. F.

1979-01-01

This paper is a summary of the observations of the cosmic X-ray sky performed by the MIT 1-40-keV X-ray detectors on OSO 7 between October 1971 and May 1973. Specifically, mean intensities or upper limits of all third Uhuru or OSO 7 cataloged sources (185 sources) in the 3-10-keV range are computed. For those sources for which a statistically significant (greater than 20) intensity was found in the 3-10-keV band (138 sources), further intensity determinations were made in the 1-15-keV, 1-6-keV, and 15-40-keV energy bands. Graphs and other simple techniques are provided to aid the user in converting the observed counting rates to convenient units and in determining spectral parameters. Long-term light curves (counting rates in one or more energy bands as a function of time) are plotted for 86 of the brighter sources.
Research on Primary Shielding Calculation Source Generation Codes

Science.gov (United States)

Zheng, Zheng; Mei, Qiliang; Li, Hui; Shangguan, Danhua; Zhang, Guangchun

2017-09-01

Primary Shielding Calculation (PSC) plays an important role in reactor shielding design and analysis. In order to facilitate PSC, a source generation code is developed to generate cumulative distribution functions (CDF) for the source particle sample code of the J Monte Carlo Transport (JMCT) code, and a source particle sample code is deveoped to sample source particle directions, types, coordinates, energy and weights from the CDFs. A source generation code is developed to transform three dimensional (3D) power distributions in xyz geometry to source distributions in r θ z geometry for the J Discrete Ordinate Transport (JSNT) code. Validation on PSC model of Qinshan No.1 nuclear power plant (NPP), CAP1400 and CAP1700 reactors are performed. Numerical results show that the theoretical model and the codes are both correct.
Tissue-Engineered Vascular Rings from Human iPSC-Derived Smooth Muscle Cells

Directory of Open Access Journals (Sweden)

Biraja C. Dash

2016-07-01

Full Text Available There is an urgent need for an efficient approach to obtain a large-scale and renewable source of functional human vascular smooth muscle cells (VSMCs to establish robust, patient-specific tissue model systems for studying the pathogenesis of vascular disease, and for developing novel therapeutic interventions. Here, we have derived a large quantity of highly enriched functional VSMCs from human induced pluripotent stem cells (hiPSC-VSMCs. Furthermore, we have engineered 3D tissue rings from hiPSC-VSMCs using a facile one-step cellular self-assembly approach. The tissue rings are mechanically robust and can be used for vascular tissue engineering and disease modeling of supravalvular aortic stenosis syndrome. Our method may serve as a model system, extendable to study other vascular proliferative diseases for drug screening. Thus, this report describes an exciting platform technology with broad utility for manufacturing cell-based tissues and materials for various biomedical applications.
Stellar abundances in the solar neighborhood: The Hypatia Catalog

Energy Technology Data Exchange (ETDEWEB)

Hinkel, Natalie R.; Timmes, F.X.; Young, Patrick A.; Pagano, Michael D. [School of Earth and Space Exploration, Arizona State University, Tempe, AZ 85287 (United States); Turnbull, Margaret C. [Global Science Institute, P.O. Box 252, Antigo, WI 54409 (United States)

2014-09-01

We compile spectroscopic abundance data from 84 literature sources for 50 elements across 3058 stars in the solar neighborhood, within 150 pc of the Sun, to produce the Hypatia Catalog. We evaluate the variability of the spread in abundance measurements reported for the same star by different surveys. We also explore the likely association of the star within the Galactic disk, the corresponding observation and abundance determination methods for all catalogs in Hypatia, the influence of specific catalogs on the overall abundance trends, and the effect of normalizing all abundances to the same solar scale. The resulting stellar abundance determinations in the Hypatia Catalog are analyzed only for thin-disk stars with observations that are consistent between literature sources. As a result of our large data set, we find that the stars in the solar neighborhood may reveal an asymmetric abundance distribution, such that a [Fe/H]-rich group near the midplane is deficient in Mg, Si, S, Ca, Sc II, Cr II, and Ni as compared to stars farther from the plane. The Hypatia Catalog has a wide number of applications, including exoplanet hosts, thick- and thin-disk stars, and stars with different kinematic properties.
File list: Unc.PSC.50.Unclassified.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.50.Unclassified.AllCell mm9 Unclassified Unclassified Pluripotent stem cell...73,SRX355578 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.50.Unclassified.AllCell.bed ...
File list: Unc.PSC.05.Unclassified.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.05.Unclassified.AllCell mm9 Unclassified Unclassified Pluripotent stem cell...8,SRX1034724 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.05.Unclassified.AllCell.bed ...
Sexually localized expression of pseudo-self compatibility (PSC) in Petunia X hybrida Hort : 2. Stylar inactivation.

Science.gov (United States)

Dana, M N; Ascher, P D

1986-01-01

A previously identified S-linked stylar-inactivation PSC factor (Flaschenriem and Ascher 1979b) was studied for its location relative to S. Plants exhibiting complete stylar-inactivation PSC were those with higher multigenic PSC background level than plants with only S-linked partial stylar-inactivation PSC. A pollen-mediated pseudo-self compatibility (PMPSC) adjustment factor was offered as a device to focus on stylar-inactivation PSC by removing some male origin, multigenic PSC. The stylar inactivation factor was not tightly linked to S but affected expression of only the allele to which it was linked. A three part interacting association of genetic material governing self incompatibility (SI) is proposed. The parts of S are the SI identity gene, S-specific PSC genes and, finally, PSC genes which are not S-specific in action. The complete association is termed the SI-complex.
Development of Embedded EM Sensors for Estimating Tensile Forces of PSC Girder Bridges

Science.gov (United States)

Kim, Ju-Won; Lee, Chaggil; Park, Seunghee

2017-01-01

The tensile force of pre-stressed concrete (PSC) girders is the most important factor for managing the stability of PSC bridges. The tensile force is induced using pre-stressing (PS) tendons of a PSC girder. Because the PS tendons are located inside of the PSC girder, the tensile force cannot be measured after construction using conventional NDT (non-destructive testing) methods. To monitor the induced tensile force of a PSC girder, an embedded EM (elasto-magnetic) sensor was proposed in this study. The PS tendons are made of carbon steel, a ferromagnetic material. The magnetic properties of the ferromagnetic specimen are changed according to the induced magnetic field, temperature, and induced stress. Thus, the tensile force of PS tendons can be estimated by measuring their magnetic properties. The EM sensor can measure the magnetic properties of ferromagnetic materials in the form of a B (magnetic density)-H (magnetic force) loop. To measure the B-H loop of a PS tendon in a PSC girder, the EM sensor should be embedded into the PSC girder. The proposed embedded EM sensor can be embedded into a PSC girder as a sheath joint by designing screw threads to connect with the sheath. To confirm the proposed embedded EM sensors, the experimental study was performed using a down-scaled PSC girder model. Two specimens were constructed with embedded EM sensors, and three sensors were installed in each specimen. The embedded EM sensor could measure the B-H loop of PS tendons even if it was located inside concrete, and the area of the B-H loop was proportionally decreased according to the increase in tensile force. According to the results, the proposed method can be used to estimate the tensile force of unrevealed PS tendons. PMID:28867790
The ALFALFA Extragalactic Catalog and Data Processing Pipeline

Science.gov (United States)

Kent, Brian R.; Haynes, Martha P.; Giovanelli, Riccardo; ALFALFA Team

2018-06-01

The Arecibo Legacy Fast ALFA 21cm HI Survey has reached completion. The observations and data are used by team members and the astronomical community in a variety of scientific initiatives with gas-rich galaxies, cluster environments, and studies of low redshift cosmology. The survey covers nearly 7000 square degrees of high galactic latitude sky visible from Arecibo, Puerto Rico and ~4400 hours of observations from 2005 to 2011. We present the extragalactic HI source catalog of over ~31,000 detections, their measured properties, and associated derived parameters. The observations were carefully reduced using a custom made data reduction pipeline and interface. Team members interacted with this pipeline through observation planning, calibration, imaging, source extraction, and cataloging. We describe this processing workflow as it pertains to the complexities of the single-dish multi-feed data reduction as well as known caveats of the source catalog and spectra for use in future astronomical studies and analysis. The ALFALFA team at Cornell has been supported by NSF grants AST-0607007, AST-1107390 and AST-1714828 and by grants from the Brinson Foundation.
The First U.S. Naval Observatory Robotic Astrometric Telescope Catalog

Science.gov (United States)

2015-10-01

over 188 million objects matched with the Two Micron All Sky Survey ( 2MASS ) point-source catalog proper motions (typically 5–7 masyr–1 standard...errors) are provided. These data are supplemented by 2MASS and AAVSO Photometric All-Sky Survey (APASS) photometry. Observations, reductions, and catalog...reference star catalog for current epochs about 4 times more precise than UCAC with a density similar to the Two Micron All Sky Survey ( 2MASS
WCSTools 3.0: More Tools for Image Astrometry and Catalog Searching

Science.gov (United States)

Mink, Douglas J.

For five years, WCSTools has provided image astrometry for astronomers who need accurate positions for objects they wish to observe. Other functions have been added and improved since the package was first released. Support has been added for new catalogs, such as the GSC-ACT, 2MASS Point Source Catalog, and GSC II, as they have been published. A simple command line interface can search any supported catalog, returning information in several standard formats, whether the catalog is on a local disk or searchable over the World Wide Web. The catalog searching routine can be located on either end (or both ends!) of such a web connection, and the output from one catalog search can be used as the input to another search.
Classification of X-ray sources in the XMM-Newton serendipitous source catalog: Objects of special interest

Energy Technology Data Exchange (ETDEWEB)

Lin, Dacheng; Webb, Natalie A.; Barret, Didier, E-mail: dlin@ua.edu [CNRS, IRAP, 9 Avenue du Colonel Roche, BP 44346, F-31028 Toulouse Cedex 4 (France)

2014-01-01

We analyze 18 sources that showed interesting properties of periodicity, very soft spectra, and/or large long-term variability in X-rays in our project of classification of sources from the 2XMMi-DR3 catalog, but were poorly studied in the literature, in order to investigate their nature. Two hard sources show X-ray periodicities of ∼1.62 hr (2XMM J165334.4–414423) and ∼2.1 hr (2XMM J133135.2–315541) and are probably magnetic cataclysmic variables. One source, 2XMM J123103.2+110648, is an active galactic nucleus (AGN) candidate showing very soft X-ray spectra (kT ∼ 0.1 keV) and exhibiting an intermittent ∼3.8 hr quasi-periodic oscillation. There are six other very soft sources (with kT < 0.2 keV), which might be in other galaxies with luminosities between ∼10{sup 38}-10{sup 42} erg s{sup –1}. They probably represent a diverse group that might include objects such as ultrasoft AGNs and cool thermal disk emission from accreting intermediate-mass black holes. Six highly variable sources with harder spectra are probably in nearby galaxies with luminosities above 10{sup 37} erg s{sup –1} and thus are great candidates for extragalactic X-ray binaries. One of them (2XMMi J004211.2+410429, in M31) is probably a new-born persistent source, having been X-ray bright and hard in 0.3-10 keV for at least four years since it was discovered entering an outburst in 2007. Three highly variable hard sources appear at low galactic latitudes and have maximum luminosities below ∼10{sup 34} erg s{sup –1} if they are in our Galaxy. Thus, they are great candidates for cataclysmic variables or very faint X-ray transients harboring a black hole or neutron star. Our interpretations of these sources can be tested with future long-term X-ray monitoring and multi-wavelength observations.
File list: Oth.PSC.05.Myc.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.05.Myc.AllCell mm9 TFs and others Myc Pluripotent stem cell SRX266823,SRX21...3819,SRX213807,SRX213828,SRX266824 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.05.Myc.AllCell.bed ...
File list: Oth.PSC.10.Myc.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.10.Myc.AllCell mm9 TFs and others Myc Pluripotent stem cell SRX266823,SRX21...3819,SRX213807,SRX213828,SRX266824 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.10.Myc.AllCell.bed ...
File list: Oth.PSC.50.Myc.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.50.Myc.AllCell mm9 TFs and others Myc Pluripotent stem cell SRX266823,SRX21...3819,SRX213828,SRX213807,SRX266824 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.50.Myc.AllCell.bed ...
File list: Oth.PSC.20.Myc.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.20.Myc.AllCell mm9 TFs and others Myc Pluripotent stem cell SRX266823,SRX21...3807,SRX213828,SRX213819,SRX266824 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.20.Myc.AllCell.bed ...

Induced pluripotent stem cell-derived limbal epithelial cells (LiPSC) as a cellular alternative for in vitro ocular toxicity testing.

Science.gov (United States)

Aberdam, Edith; Petit, Isabelle; Sangari, Linda; Aberdam, Daniel

2017-01-01

Induced pluripotent stem cells hold great potential to produce unlimited amount of differentiated cells as cellular source for regenerative medicine but also for in vitro drug screening and cytotoxicity tests. Ocular toxicity testing is mandatory to evaluate the risks of drugs and cosmetic products before their application to human patients by preventing eye irritation or insult. Since the global ban to use animals, many human-derived alternatives have been proposed, from ex-vivo enucleated postmortem cornea, primary corneal cell culture and immortalized corneal epithelial cell lines. All of them share limitations for their routine use. Using an improved protocol, we derived limbal epithelial cells from human induced pluripotent stem cells, named LiPSC, that are able to be passaged and differentiate further into corneal epithelial cells. Comparative RT-qPCR, immunofluorescence staining, flow cytometry analysis and zymography assays demonstrate that LiPSC are morphologically and molecularly similar to the adult stem cells. Moreover, contrary to HCE, LiPSC and primary limbal cells display similarly sensitive to cytotoxicity treatment among passages. Our data strongly suggest that LiPSC could become a powerful alternative cellular model for cosmetic and drug tests.
Induced pluripotent stem cell-derived limbal epithelial cells (LiPSC as a cellular alternative for in vitro ocular toxicity testing.

Directory of Open Access Journals (Sweden)

Edith Aberdam

Full Text Available Induced pluripotent stem cells hold great potential to produce unlimited amount of differentiated cells as cellular source for regenerative medicine but also for in vitro drug screening and cytotoxicity tests. Ocular toxicity testing is mandatory to evaluate the risks of drugs and cosmetic products before their application to human patients by preventing eye irritation or insult. Since the global ban to use animals, many human-derived alternatives have been proposed, from ex-vivo enucleated postmortem cornea, primary corneal cell culture and immortalized corneal epithelial cell lines. All of them share limitations for their routine use. Using an improved protocol, we derived limbal epithelial cells from human induced pluripotent stem cells, named LiPSC, that are able to be passaged and differentiate further into corneal epithelial cells. Comparative RT-qPCR, immunofluorescence staining, flow cytometry analysis and zymography assays demonstrate that LiPSC are morphologically and molecularly similar to the adult stem cells. Moreover, contrary to HCE, LiPSC and primary limbal cells display similarly sensitive to cytotoxicity treatment among passages. Our data strongly suggest that LiPSC could become a powerful alternative cellular model for cosmetic and drug tests.
Catalog of Investment Projects in Bulgaria

Energy Technology Data Exchange (ETDEWEB)

NONE

2011-10-15

This catalog includes information about 129 potential investment projects in Bulgaria and was developed by a team of experts from InvestBulgaria Agency in cooperation with municipalities and private companies. The document presents in brief general facts about the regions in Bulgaria. Projects are divided into the following categories: Tourism, Manufacturing, Urban Planning, Real Estate, Environment and renewable energy sources, Commerce, and Innovative and creative projects. The catalog provides detailed information about each project such as: status of the project, location, ownership, infrastructure, estimated value, contact information, etc.
Galaxy evolution and large-scale structure in the far-infrared. I. IRAS pointed observations

International Nuclear Information System (INIS)

Lonsdale, C.J.; Hacking, P.B.

1989-01-01

Redshifts for 66 galaxies were obtained from a sample of 93 60-micron sources detected serendipitously in 22 IRAS deep pointed observations, covering a total area of 18.4 sq deg. The flux density limit of this survey is 150 mJy, 4 times fainter than the IRAS Point Source Catalog (PSC). The luminosity function is similar in shape with those previously published for samples selected from the PSC, with a median redshift of 0.048 for the fainter sample, but shifted to higher space densities. There is evidence that some of the excess number counts in the deeper sample can be explained in terms of a large-scale density enhancement beyond the Pavo-Indus supercluster. In addition, the faintest counts in the new sample confirm the result of Hacking et al. (1989) that faint IRAS 60-micron source counts lie significantly in excess of an extrapolation of the PSC counts assuming no luminosity or density evolution. 81 refs
File list: Oth.PSC.20.Nanog.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.20.Nanog.AllCell mm9 TFs and others Nanog Pluripotent stem cell SRX213808,S...1351,SRX1141349,SRX1141350,SRX651982,SRX213820 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.20.Nanog.AllCell.bed ...
File list: Oth.PSC.05.Nanog.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.05.Nanog.AllCell mm9 TFs and others Nanog Pluripotent stem cell SRX248286,S...3864,SRX1141351,SRX1141350,SRX651982,SRX213820 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.05.Nanog.AllCell.bed ...
CLASSIFICATION AND RANKING OF FERMI LAT GAMMA-RAY SOURCES FROM THE 3FGL CATALOG USING MACHINE LEARNING TECHNIQUES

Energy Technology Data Exchange (ETDEWEB)

Saz Parkinson, P. M. [Department of Physics, The University of Hong Kong, Pokfulam Road, Hong Kong (China); Xu, H.; Yu, P. L. H. [Department of Statistics and Actuarial Science, The University of Hong Kong, Pokfulam Road, Hong Kong (China); Salvetti, D.; Marelli, M. [INAF—Istituto di Astrofisica Spaziale e Fisica Cosmica Milano, via E. Bassini 15, I-20133, Milano (Italy); Falcone, A. D. [Department of Astronomy and Astrophysics, The Pennsylvania State University, University Park, PA 16802 (United States)

2016-03-20

We apply a number of statistical and machine learning techniques to classify and rank gamma-ray sources from the Third Fermi Large Area Telescope Source Catalog (3FGL), according to their likelihood of falling into the two major classes of gamma-ray emitters: pulsars (PSR) or active galactic nuclei (AGNs). Using 1904 3FGL sources that have been identified/associated with AGNs (1738) and PSR (166), we train (using 70% of our sample) and test (using 30%) our algorithms and find that the best overall accuracy (>96%) is obtained with the Random Forest (RF) technique, while using a logistic regression (LR) algorithm results in only marginally lower accuracy. We apply the same techniques on a subsample of 142 known gamma-ray pulsars to classify them into two major subcategories: young (YNG) and millisecond pulsars (MSP). Once more, the RF algorithm has the best overall accuracy (∼90%), while a boosted LR analysis comes a close second. We apply our two best models (RF and LR) to the entire 3FGL catalog, providing predictions on the likely nature of unassociated sources, including the likely type of pulsar (YNG or MSP). We also use our predictions to shed light on the possible nature of some gamma-ray sources with known associations (e.g., binaries, supernova remnants/pulsar wind nebulae). Finally, we provide a list of plausible X-ray counterparts for some pulsar candidates, obtained using Swift, Chandra, and XMM. The results of our study will be of interest both for in-depth follow-up searches (e.g., pulsar) at various wavelengths and for broader population studies.
CLASSIFICATION AND RANKING OF FERMI LAT GAMMA-RAY SOURCES FROM THE 3FGL CATALOG USING MACHINE LEARNING TECHNIQUES

International Nuclear Information System (INIS)

Saz Parkinson, P. M.; Xu, H.; Yu, P. L. H.; Salvetti, D.; Marelli, M.; Falcone, A. D.

2016-01-01

We apply a number of statistical and machine learning techniques to classify and rank gamma-ray sources from the Third Fermi Large Area Telescope Source Catalog (3FGL), according to their likelihood of falling into the two major classes of gamma-ray emitters: pulsars (PSR) or active galactic nuclei (AGNs). Using 1904 3FGL sources that have been identified/associated with AGNs (1738) and PSR (166), we train (using 70% of our sample) and test (using 30%) our algorithms and find that the best overall accuracy (>96%) is obtained with the Random Forest (RF) technique, while using a logistic regression (LR) algorithm results in only marginally lower accuracy. We apply the same techniques on a subsample of 142 known gamma-ray pulsars to classify them into two major subcategories: young (YNG) and millisecond pulsars (MSP). Once more, the RF algorithm has the best overall accuracy (∼90%), while a boosted LR analysis comes a close second. We apply our two best models (RF and LR) to the entire 3FGL catalog, providing predictions on the likely nature of unassociated sources, including the likely type of pulsar (YNG or MSP). We also use our predictions to shed light on the possible nature of some gamma-ray sources with known associations (e.g., binaries, supernova remnants/pulsar wind nebulae). Finally, we provide a list of plausible X-ray counterparts for some pulsar candidates, obtained using Swift, Chandra, and XMM. The results of our study will be of interest both for in-depth follow-up searches (e.g., pulsar) at various wavelengths and for broader population studies
File list: Pol.PSC.20.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.20.AllAg.Embryoid_Bodies mm9 RNA polymerase Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.20.AllAg.Embryoid_Bodies.bed ...
File list: DNS.PSC.50.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.50.AllAg.Embryoid_Bodies mm9 DNase-seq Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.50.AllAg.Embryoid_Bodies.bed ...
File list: Pol.PSC.50.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.50.AllAg.Embryoid_Bodies mm9 RNA polymerase Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.50.AllAg.Embryoid_Bodies.bed ...
File list: Pol.PSC.05.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.05.AllAg.Embryoid_Bodies mm9 RNA polymerase Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.05.AllAg.Embryoid_Bodies.bed ...
File list: DNS.PSC.05.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.05.AllAg.Embryoid_Bodies mm9 DNase-seq Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.05.AllAg.Embryoid_Bodies.bed ...
File list: DNS.PSC.20.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.20.AllAg.Embryoid_Bodies mm9 DNase-seq Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.20.AllAg.Embryoid_Bodies.bed ...
File list: DNS.PSC.10.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.10.AllAg.Embryoid_Bodies mm9 DNase-seq Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.10.AllAg.Embryoid_Bodies.bed ...
File list: Pol.PSC.10.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.10.AllAg.Embryoid_Bodies mm9 RNA polymerase Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.10.AllAg.Embryoid_Bodies.bed ...
File list: Unc.PSC.20.AllAg.ZHBTc4 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.20.AllAg.ZHBTc4 mm9 Unclassified Pluripotent stem cell ZHBTc4 SRX567344,SRX...567345 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.20.AllAg.ZHBTc4.bed ...
Myosin light chain 2-based selection of human iPSC-derived early ventricular cardiac myocytes.

Science.gov (United States)

Bizy, Alexandra; Guerrero-Serna, Guadalupe; Hu, Bin; Ponce-Balbuena, Daniela; Willis, B Cicero; Zarzoso, Manuel; Ramirez, Rafael J; Sener, Michelle F; Mundada, Lakshmi V; Klos, Matthew; Devaney, Eric J; Vikstrom, Karen L; Herron, Todd J; Jalife, José

2013-11-01

Applications of human induced pluripotent stem cell derived-cardiac myocytes (hiPSC-CMs) would be strengthened by the ability to generate specific cardiac myocyte (CM) lineages. However, purification of lineage-specific hiPSC-CMs is limited by the lack of cell marking techniques. Here, we have developed an iPSC-CM marking system using recombinant adenoviral reporter constructs with atrial- or ventricular-specific myosin light chain-2 (MLC-2) promoters. MLC-2a and MLC-2v selected hiPSC-CMs were purified by fluorescence-activated cell sorting and their biochemical and electrophysiological phenotypes analyzed. We demonstrate that the phenotype of both populations remained stable in culture and they expressed the expected sarcomeric proteins, gap junction proteins and chamber-specific transcription factors. Compared to MLC-2a cells, MLC-2v selected CMs had larger action potential amplitudes and durations. In addition, by immunofluorescence, we showed that MLC-2 isoform expression can be used to enrich hiPSC-CM consistent with early atrial and ventricular myocyte lineages. However, only the ventricular myosin light chain-2 promoter was able to purify a highly homogeneous population of iPSC-CMs. Using this approach, it is now possible to develop ventricular-specific disease models using iPSC-CMs while atrial-specific iPSC-CM cultures may require additional chamber-specific markers. © 2013.
File list: Oth.PSC.05.Biotin.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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File list: Oth.PSC.50.Biotin.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.PSC.10.Biotin.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Unc.PSC.20.AllAg.EpiLC [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Unc.PSC.50.AllAg.EpiLC [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Unc.PSC.10.AllAg.EpiLC [Chip-atlas[Archive

Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Far infrared supplement: Catalog of infrared observations, second edition

International Nuclear Information System (INIS)

Gezari, D.Y.; Schmitz, M.; Mead, J.M.

1988-08-01

The Far Infrared Supplement: Catalog of Infrared Observations summarizes all infrared astronomical observations at far infrared wavelengths (5 to 1000 microns) published in the scientific literature from 1965 through 1986. The Supplement list contain 25 percent of the observations in the full Catalog of Infrared Observations (CIO), and essentially eliminates most visible stars from the listings. The Supplement is thus more compact than the main catalog, and is intended for easy reference during astronomical observations. The Far Infrared Supplement (2nd Edition) includes the Index of Infrared Source Positions and the Bibliography of Infrared Astronomy for the subset of far infrared observations listed
AKARI INFRARED CAMERA SURVEY OF THE LARGE MAGELLANIC CLOUD. II. THE NEAR-INFRARED SPECTROSCOPIC CATALOG

International Nuclear Information System (INIS)

Shimonishi, Takashi; Onaka, Takashi; Kato, Daisuke; Sakon, Itsuki; Ita, Yoshifusa; Kawamura, Akiko; Kaneda, Hidehiro

2013-01-01

We performed a near-infrared spectroscopic survey toward an area of ∼10 deg 2 of the Large Magellanic Cloud (LMC) with the infrared satellite AKARI. Observations were carried out as part of the AKARI Large-area Survey of the Large Magellanic Cloud (LSLMC). The slitless multi-object spectroscopic capability of the AKARI/IRC enabled us to obtain low-resolution (R ∼ 20) spectra in 2-5 μm for a large number of point sources in the LMC. As a result of the survey, we extracted about 2000 infrared spectra of point sources. The data are organized as a near-infrared spectroscopic catalog. The catalog includes various infrared objects such as young stellar objects (YSOs), asymptotic giant branch (AGB) stars, supergiants, and so on. It is shown that 97% of the catalog sources have corresponding photometric data in the wavelength range from 1.2 to 11 μm, and 67% of the sources also have photometric data up to 24 μm. The catalog allows us to investigate near-infrared spectral features of sources by comparison with their infrared spectral energy distributions. In addition, it is estimated that about 10% of the catalog sources are observed at more than two different epochs. This enables us to study a spectroscopic variability of sources by using the present catalog. Initial results of source classifications for the LSLMC samples are presented. We classified 659 LSLMC spectra based on their near-infrared spectral features by visual inspection. As a result, it is shown that the present catalog includes 7 YSOs, 160 C-rich AGBs, 8 C-rich AGB candidates, 85 O-rich AGBs, 122 blue and yellow supergiants, 150 red super giants, and 128 unclassified sources. Distributions of the classified sources on the color-color and color-magnitude diagrams are discussed in the text. Continuous wavelength coverage and high spectroscopic sensitivity in 2-5 μm can only be achieved by space observations. This is an unprecedented large-scale spectroscopic survey toward the LMC in the near
File list: Unc.PSC.50.AllAg.EpiSC [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.50.AllAg.EpiSC mm9 Unclassified Pluripotent stem cell EpiSC SRX1074917,SRX1...074905,SRX1074908 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.50.AllAg.EpiSC.bed ...
File list: Unc.PSC.05.AllAg.EpiSC [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Unc.PSC.20.AllAg.EpiSC [Chip-atlas[Archive

Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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File list: ALL.PSC.05.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.05.AllAg.Embryoid_Bodies mm9 All antigens Pluripotent stem cell Embryoid Bodie...X385956,SRX385955,SRX385958,SRX385957 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.05.AllAg.Embryoid_Bodies.bed ...
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Lifescience Database Archive (English)

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File list: ALL.PSC.50.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.50.AllAg.Embryoid_Bodies mm9 All antigens Pluripotent stem cell Embryoid Bodie...X385956,SRX385955,SRX385958,SRX385957 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.50.AllAg.Embryoid_Bodies.bed ...
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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Methamphetamine increases Prion Protein and induces dopamine-dependent expression of protease resistant PrPsc.

Science.gov (United States)

Ferrucci, M; Ryskalin, L; Biagioni, F; Gambardella, S; Busceti, C L; Falleni, A; Lazzeri, G; Fornai, F

2017-07-01

The cellular prion protein (PrPc) is physiologically expressed within selective brain areas of mammals. Alterations in the secondary structure of this protein lead to scrapie-like prion protein (PrPsc), which precipitates in the cell. PrPsc has been detected in infectious, inherited or sporadic neurodegenerative disorders. Prion protein metabolism is dependent on autophagy and ubiquitin proteasome. Despite not being fully elucidated, the physiological role of prion protein relates to chaperones which rescue cells under stressful conditions.Methamphetamine (METH) is a widely abused drug which produces oxidative stress in various brain areas causing mitochondrial alterations and protein misfolding. These effects produce a compensatory increase of chaperones while clogging cell clearing pathways. In the present study, we explored whether METH administration modifies the amount of PrPc. Since high levels of PrPc when the clearing systems are clogged may lead to its misfolding into PrPsc, we further tested whether METH exposure triggers the appearance of PrPsc. We analysed the effects of METH and dopamine administration in PC12 and striatal cells by using SDS-PAGE Coomassie blue, immune- histochemistry and immune-gold electron microscopy. To analyze whether METH administration produces PrPsc aggregates we used antibodies directed against PrP following exposure to proteinase K or sarkosyl which digest folded PrPc but misfolded PrPsc. We fond that METH triggers PrPsc aggregates in DA-containing cells while METH is not effective in primary striatal neurons which do not produce DA. In the latter cells exogenous DA is needed to trigger PrPsc accumulation similarly to what happens in DA containing cells under the effects of METH. The present findings, while fostering novel molecular mechanisms involving prion proteins, indicate that, cell pathology similar to prion disorders can be mimicked via a DA-dependent mechanism by a drug of abuse.
Development and validation of a primary sclerosing cholangitis-specific patient-reported outcomes instrument: The PSC PRO.

Science.gov (United States)

Younossi, Zobair M; Afendy, Arian; Stepanova, Maria; Racila, Andrei; Nader, Fatema; Gomel, Rachel; Safer, Ricky; Lenderking, William R; Skalicky, Anne; Kleinman, Leah; Myers, Robert P; Subramanian, G Mani; McHutchison, John G; Levy, Cynthia; Bowlus, Christopher L; Kowdley, Kris; Muir, Andrew J

2017-11-20

Primary sclerosing cholangitis (PSC) is a chronic liver disease associated with inflammation and biliary fibrosis that leads to cholangitis, cirrhosis, and impaired quality of life. Our objective was to develop and validate a PSC-specific patient-reported outcome (PRO) instrument. We developed a 42-item PSC PRO instrument that contains two modules (Symptoms and Impact of Symptoms) and conducted an external validation. Reliability and validity were evaluated using clinical data and a battery of other validated instruments. Test-retest reliability was assessed in a subgroup of patients who repeated the PSC PRO after the first administration. One hundred two PSC subjects (44 ± 13 years; 32% male, 74% employed, 39% with cirrhosis, 14% with a history of decompensated cirrhosis, 38% history of depression, and 68% with inflammatory bowel disease [IBD]) completed PSC PRO and other PRO instruments (Short Form 36 V2 [SF-36], Chronic Liver Disease Questionnaire [CLDQ], Primary Biliary Cholangitis - 40 [PBC-40], and five dimensions [5-D Itch]). PSC PRO demonstrated excellent internal consistency (Cronbach alphas, 0.84-0.94) and discriminant validity (41 of 42 items had the highest correlations with their own domains). There were good correlations between PSC PRO domains and relevant domains of SF-36, CLDQ, and PBC-40 (R = 0.69-0.90; all P 0.05). Test-retest reliability was assessed in 53 subjects who repeated PSC PRO within a median (interquartile range) of 37 (27-47) days. There was excellent reliability for most domains with intraclass correlations (0.71-0.88; all P < 0.001). PSC PRO is a self-administered disease-specific instrument developed according to U.S. Food and Drug Administration guidelines. This preliminary validation study suggests good psychometric properties. Further validation of the instrument in a larger and more diverse sample of PSC patients is needed. (Hepatology 2017). © 2017 by the American Association for the Study of Liver Diseases.
File list: Unc.PSC.50.AllAg.P19 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.50.AllAg.P19 mm9 Unclassified Pluripotent stem cell P19 SRX1098121,SRX10981...20,SRX1098122,SRX1098124,SRX1098123,SRX1098125 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.50.AllAg.P19.bed ...
File list: Unc.PSC.05.AllAg.P19 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.05.AllAg.P19 mm9 Unclassified Pluripotent stem cell P19 SRX1098120,SRX10981...23,SRX1098121,SRX1098122,SRX1098125,SRX1098124 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.05.AllAg.P19.bed ...
File list: Unc.PSC.20.AllAg.P19 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.20.AllAg.P19 mm9 Unclassified Pluripotent stem cell P19 SRX1098121,SRX10981...20,SRX1098123,SRX1098122,SRX1098124,SRX1098125 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.20.AllAg.P19.bed ...
File list: Unc.PSC.10.AllAg.P19 [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.10.AllAg.P19 mm9 Unclassified Pluripotent stem cell P19 SRX1098120,SRX10981...21,SRX1098122,SRX1098124,SRX1098123,SRX1098125 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.10.AllAg.P19.bed ...
File list: ALL.PSC.50.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.50.AllAg.mESCs,_differentiated mm9 All antigens Pluripotent stem cell mESCs, differentia...barchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.50.AllAg.mESCs,_differentiated.bed ...
File list: ALL.PSC.10.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.10.AllAg.mESCs,_differentiated mm9 All antigens Pluripotent stem cell mESCs, differentia...barchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.10.AllAg.mESCs,_differentiated.bed ...
File list: ALL.PSC.20.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.20.AllAg.mESCs,_differentiated mm9 All antigens Pluripotent stem cell mESCs, differentia...barchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.20.AllAg.mESCs,_differentiated.bed ...
File list: ALL.PSC.05.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.05.AllAg.mESCs,_differentiated mm9 All antigens Pluripotent stem cell mESCs, differentia...barchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.05.AllAg.mESCs,_differentiated.bed ...

File list: InP.PSC.05.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.05.Input_control.AllCell mm9 Input control Input control Pluripotent stem c... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.05.Input_control.AllCell.bed ...
Safeguards instrumentation: a computer-based catalog

International Nuclear Information System (INIS)

Fishbone, L.G.; Keisch, B.

1981-08-01

The information contained in this catalog is needed to provide a data base for safeguards studies and to help establish criteria and procedures for international safeguards for nuclear materials and facilities. The catalog primarily presents information on new safeguards equipment. It also describes entire safeguards systems for certain facilities, but it does not describe the inspection procedures. Because IAEA safeguards do not include physical security, devices for physical protection (as opposed to containment and surveillance) are not included. An attempt has been made to list capital costs, annual maintenance costs, replacement costs, and useful lifetime for the equipment. For equipment which is commercially available, representative sources have been listed whenever available
Safeguards instrumentation: a computer-based catalog

Energy Technology Data Exchange (ETDEWEB)

Fishbone, L.G.; Keisch, B.

1981-08-01

The information contained in this catalog is needed to provide a data base for safeguards studies and to help establish criteria and procedures for international safeguards for nuclear materials and facilities. The catalog primarily presents information on new safeguards equipment. It also describes entire safeguards systems for certain facilities, but it does not describe the inspection procedures. Because IAEA safeguards do not include physical security, devices for physical protection (as opposed to containment and surveillance) are not included. An attempt has been made to list capital costs, annual maintenance costs, replacement costs, and useful lifetime for the equipment. For equipment which is commercially available, representative sources have been listed whenever available.
Measuring Law Library Catalog Web Site Usability: A Web Analytic Approach

Science.gov (United States)

Fang, Wei; Crawford, Marjorie E.

2008-01-01

Although there is a proliferation of information available on the Web, and law professors, students, and other users have a variety of channels to locate information and complete their research activities, the law library catalog still remains an important source for offering users access to information that has been evaluated and cataloged by…
A Catalog of Moment Tensors and Source-type Characterization for Small Events at Uturuncu Volcano, Bolivia

Science.gov (United States)

Alvizuri, C. R.; Tape, C.

2015-12-01

We present a catalog of full seismic moment tensors for 63 events from Uturuncu volcano in Bolivia. The events were recorded during 2011-2012 in the PLUTONS seismic array of 24 broadband stations. Most events had magnitudes between 0.5 and 2.0 and did not generate discernible surface waves; the largest event was Mw 2.8. For each event we computed the misfit between observed and synthetic waveforms, and we also used first-motion polarity measurements to reduce the number of possible solutions. Each moment tensor solution was obtained using a grid search over the six-dimensional space of moment tensors. For each event we characterize the variation of moment tensor source type by plotting the misfit function in eigenvalue space, represented by a lune. We plot the optimal solutions for the 63 events on the lune in order to identify three subsets of the catalog: (1) a set of isotropic events, (2) a set of tensional crack events, and (3) a swarm of events southeast of the volcanic center that appear to be double couples. The occurrence of positively isotropic events is consistent with other published results from volcanic and geothermal regions. Several of these previous results, as well as our results, cannot be interpreted within the context of either an oblique opening crack or a crack-plus-double-couple model; instead they require a multiple-process source model. Our study emphasizes the importance of characterizing uncertainties for full moment tensors, and it provides strong support for isotropic events at Uturuncu volcano.
Site locality identification study: Hanford Site. Volume II. Data cataloging

International Nuclear Information System (INIS)

1980-07-01

Data compilation and cataloging for the candidate site locality identification study were conducted in order to provide a retrievable data cataloging system for the present siting study and future site evaluation and licensng processes. This task occurred concurrently with and also independently of other tasks of the candidate site locality identification study. Work in this task provided the data utilized primarily in the development and application of screening and ranking processes to identify candidate site localities on the Hanford Site. The overall approach included two steps: (1) data acquisition and screening; and (2) data compilation and cataloging. Data acquisition and screening formed the basis for preliminary review of data sources with respect to their probable utilization in the candidate site locality identification study and review with respect to the level of completeness and detail of the data. The important working assumption was that the data to be used in the study be based on existing and available published and unpublished literature. The data compilation and cataloging provided the basic product of the Task; a retrievable data cataloging system in the form of an annotated reference list and key word index and an index of compiled data. The annotated reference list and key word index are cross referenced and can be used to trace and retrieve the data sources utilized in the candidate site locality identification study
File list: NoD.PSC.10.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.10.AllAg.Embryoid_Bodies mm9 No description Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.10.AllAg.Embryoid_Bodies.bed ...
File list: NoD.PSC.50.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.50.AllAg.Embryoid_Bodies mm9 No description Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.50.AllAg.Embryoid_Bodies.bed ...
File list: NoD.PSC.05.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.05.AllAg.Embryoid_Bodies mm9 No description Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.05.AllAg.Embryoid_Bodies.bed ...
File list: NoD.PSC.20.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.20.AllAg.Embryoid_Bodies mm9 No description Pluripotent stem cell Embryoid Bodie...s http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.20.AllAg.Embryoid_Bodies.bed ...
File list: Unc.PSC.05.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.05.AllAg.mESCs,_differentiated mm9 Unclassified Pluripotent stem cell mESCs, differentia...ted http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.05.AllAg.mESCs,_differentiated.bed ...
File list: Unc.PSC.20.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.20.AllAg.mESCs,_differentiated mm9 Unclassified Pluripotent stem cell mESCs, differentia...ted http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Unc.PSC.20.AllAg.mESCs,_differentiated.bed ...
A study of the stellar population in the Lynds 1641 dark cloud. I. The IRAS catalog sources

International Nuclear Information System (INIS)

Strom, K.M.; Newton, G.; Strom, S.E.; Seaman, R.L.; Carrasco, L.

1989-01-01

The character of the sources identified in the IRAS Point Source Catalog and located within the boundaries of the nearest giant molecular cloud, Lynds 1641 is discussed. New optical and near-infrared photometry are combined to provide spectral energy distributions (SEDs) for these objects divided into three classes: class I objects with flat or rising spectra, class II objects with spectra intermediate in slope between a flat and blackbody spectrum, and class III objects with spectra similar to those of blackbodies. It is found that L1641 contains a much larger percentage of class I sources than does the nearby Taurus-Auriga star-forming complex. Spectral energy distributions for the IRAS-selected sample are examined and compared with SEDs for young stellar objects (YSOs) located in Taurus-Auriga. The IRAS-selected sources having optical counterparts in the H-R diagram are identified and discussed along with the distribution of masses and ages for these YSOs. 86 refs
The third IBIS/ISGRI soft gamma-ray survey catalog

International Nuclear Information System (INIS)

Bird, A.J.; Barlow, E.J.; Hill, A.B.; Clark, D.J.; Dean, A.J.; Molina, M.; Sguera, V.; Malizia, A.; Bassani, L.; Capitanio, F.; Stephen, J.B.; Bazzano, A.; Fiocchi, M.; Ubertini, P.; Belanger, G.; Gotz, D.; Lebrun, F.; Renaud, M.; Zurita, J.; Produit, N.; Produit, N.; Walter, R.; Terrier, R.; Walter, R.; Winkler, C.

2007-01-01

In this paper we report on the third soft gamma-ray source catalog obtained with the IBIS/ISGRI gamma-ray imager on board the INTEGRAL satellite. The scientific data set is based on more than 40 Ms of high-quality observations performed during the first 3.5 yr of Core Program and public IBIS/ISGRI observations. Compared to previous IBIS/ISGRI surveys, this catalog includes a substantially increased coverage of extragalactic fields, and comprises more than 400 high-energy sources detected in the energy range 17-100 keV, including both transients and faint persistent objects that can only be revealed with longer exposure times. (authors)
File list: His.PSC.10.H2APERIODZac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.10.H2APERIODZac.AllCell mm9 Histone H2A.Zac Pluripotent stem cell SRX111870... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.10.H2APERIODZac.AllCell.bed ...
File list: His.PSC.05.H2APERIODZac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.05.H2APERIODZac.AllCell mm9 Histone H2A.Zac Pluripotent stem cell SRX111870... http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.05.H2APERIODZac.AllCell.bed ...
File list: Pol.PSC.50.RNA_Polymerase_II.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.50.RNA_Polymerase_II.AllCell mm9 RNA polymerase RNA Polymerase II Pluripote...SRX213760,SRX213764 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.50.RNA_Polymerase_II.AllCell.bed ...
File list: Pol.PSC.20.RNA_Polymerase_II.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.20.RNA_Polymerase_II.AllCell mm9 RNA polymerase RNA Polymerase II Pluripote...SRX213760,SRX213764 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.20.RNA_Polymerase_II.AllCell.bed ...
File list: Pol.PSC.05.RNA_polymerase_III.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.05.RNA_polymerase_III.AllCell hg19 RNA polymerase RNA polymerase III Plurip...otent stem cell http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.PSC.05.RNA_polymerase_III.AllCell.bed ...
File list: InP.PSC.05.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.05.Input_control.AllCell hg19 Input control Input control Pluripotent stem ...RX342849,ERX342851 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.PSC.05.Input_control.AllCell.bed ...

File list: DNS.PSC.50.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.50.AllAg.mESCs,_differentiated mm9 DNase-seq Pluripotent stem cell mESCs, differentia...ted http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.50.AllAg.mESCs,_differentiated.bed ...
File list: DNS.PSC.05.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.05.AllAg.mESCs,_differentiated mm9 DNase-seq Pluripotent stem cell mESCs, differentia...ted http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.05.AllAg.mESCs,_differentiated.bed ...
File list: DNS.PSC.10.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.10.AllAg.mESCs,_differentiated mm9 DNase-seq Pluripotent stem cell mESCs, differentia...ted http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.10.AllAg.mESCs,_differentiated.bed ...
File list: DNS.PSC.20.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.20.AllAg.mESCs,_differentiated mm9 DNase-seq Pluripotent stem cell mESCs, differentia...ted http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.20.AllAg.mESCs,_differentiated.bed ...
File list: Pol.PSC.50.RNA_polymerase_III.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.50.RNA_polymerase_III.AllCell hg19 RNA polymerase RNA polymerase III Plurip...otent stem cell http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.PSC.50.RNA_polymerase_III.AllCell.bed ...
File list: InP.PSC.20.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.20.Input_control.AllCell hg19 Input control Input control Pluripotent stem ...RX342850,ERX342851 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.PSC.20.Input_control.AllCell.bed ...
File list: InP.PSC.10.Input_control.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.10.Input_control.AllCell hg19 Input control Input control Pluripotent stem ...RX342849,ERX342851 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.PSC.10.Input_control.AllCell.bed ...
File list: Pol.PSC.20.RNA_polymerase_II.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.20.RNA_polymerase_II.AllCell hg19 RNA polymerase RNA polymerase II Pluripot...670820,SRX702057,SRX702061 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.PSC.20.RNA_polymerase_II.AllCell.bed ...
File list: Pol.PSC.10.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.10.AllAg.mESCs,_differentiated mm9 RNA polymerase Pluripotent stem cell mESCs, differentia...ted SRX590276 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.10.AllAg.mESCs,_differentiated.bed ...
File list: Pol.PSC.05.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.05.AllAg.mESCs,_differentiated mm9 RNA polymerase Pluripotent stem cell mESCs, differentia...ted SRX590276 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.05.AllAg.mESCs,_differentiated.bed ...
File list: Pol.PSC.50.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.50.AllAg.mESCs,_differentiated mm9 RNA polymerase Pluripotent stem cell mESCs, differentia...ted SRX590276 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.50.AllAg.mESCs,_differentiated.bed ...
File list: Pol.PSC.20.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.20.AllAg.mESCs,_differentiated mm9 RNA polymerase Pluripotent stem cell mESCs, differentia...ted SRX590276 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.20.AllAg.mESCs,_differentiated.bed ...
File list: Pol.PSC.05.RNA_polymerase_II.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.05.RNA_polymerase_II.AllCell hg19 RNA polymerase RNA polymerase II Pluripot...833412,SRX149642,SRX702059 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Pol.PSC.05.RNA_polymerase_II.AllCell.bed ...
An IRAS-Based Search for New Dusty Late-Type WC Wolf-Rayet Stars

Science.gov (United States)

Cohen, Martin

1995-01-01

I have examined all Infrared Astronomical Satellite (IRAS) data relevant to the 173 Galactic Wolf-Rayet (W-R) stars in an updated catalog, including the 13 stars newly discovered by Shara and coworkers. Using the W-R coordinates in these lists, I have examined the IRAS Point Source Catalog (PSC), the Faint Source Catalog, and the Faint Source Reject Catalog, and have generated one-dimensional spatial profiles, 'ADDSCANs', and two-dimensional full-resolution images, 'FRESCOS'. The goal was to assemble the best set of observed IRAS color indices for different W-R types, in particular for known dusty late-type WC Wolf-Rayet (WCL) objects. I have also unsuccessfully sought differences in IRAS colors and absolute magnitudes between single and binary W-R stars. The color indices for the entire ensemble of W-R stars define zones in the IRAS color-color ([12] - [25], [25] - [60])-plane. By searching the PSC for otherwise unassociated sources that satisfy these colors, I have identified potential new W-R candidates, perhaps too faint to have been recognized in previous optical searches. I have extracted these candidates' IRAS low-resolution spectrometer (LRS) data and compared the spectra with the highly characteristic LRS shape for known dusty WCL stars. The 13 surviving candidates must now be ex amined by optical spectroscopy. This work represents a much more rigorous and exhaustive version of the LRS study that identified IRAS 17380 - 3031 (WR98a) as the first new W-R (WC9) star discovered by IPAS. This search should have detected dusty WCL stars to a distance of 7.0 kpc from the Sun, for l is greater than 30 degrees, and to 2.9 kpc even in the innermost galaxy. For free-free-dominated W-R stars the corresponding distances are 2.5 and 1.0 kpc, respectively.
File list: His.PSC.10.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.10.AllAg.iPS_cells hg19 Histone Pluripotent stem cell iPS cells SRX110016,S...315,SRX381309 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.10.AllAg.iPS_cells.bed ...
File list: His.PSC.05.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.05.AllAg.iPS_cells hg19 Histone Pluripotent stem cell iPS cells SRX317576,S...077,SRX317607 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.05.AllAg.iPS_cells.bed ...
File list: Oth.PSC.05.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.05.AllAg.iPS_cells mm9 TFs and others Pluripotent stem cell iPS cells SRX65...RX146524 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.05.AllAg.iPS_cells.bed ...
File list: Oth.PSC.50.Kdm4c.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.50.Kdm4c.AllCell mm9 TFs and others Kdm4c Pluripotent stem cell SRX424007,S...RX424008 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.50.Kdm4c.AllCell.bed ...
File list: His.PSC.20.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.20.AllAg.iPS_cells hg19 Histone Pluripotent stem cell iPS cells SRX110015,S...315,SRX381309 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.20.AllAg.iPS_cells.bed ...
File list: Unc.PSC.05.AllAg.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.05.AllAg.AllCell mm9 Unclassified Pluripotent stem cell SRX055368,SRX170840...jp/kyushu-u/mm9/assembled/Unc.PSC.05.AllAg.AllCell.bed ... ...567344,SRX847249,SRX1092372,SRX1092375,SRX1034725,SRX213761,SRX316695,SRX213757,SRX501738,SRX1034724 http://dbarchive.biosciencedbc.

File list: Unc.PSC.50.AllAg.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Unc.PSC.50.AllAg.AllCell mm9 Unclassified Pluripotent stem cell SRX152135,SRX152134...jp/kyushu-u/mm9/assembled/Unc.PSC.50.AllAg.AllCell.bed ... ...1098125,SRX1034724,SRX1034725,SRX213761,SRX170844,SRX847249,SRX1074907,SRX213757,SRX355573,SRX355578 http://dbarchive.biosciencedbc.
Electrophysiological analysis of human pluripotent stem cell-derived cardiomyocytes (hPSC-CMs) using multi-electrode arrays (MEAs)

NARCIS (Netherlands)

Sala, Luca; Ward-van Oostwaard, Dorien; Tertoolen, Leon G.J.; Mummery, Christine L.; Bellin, Milena

2017-01-01

Cardiomyocytes can now be derived with high efficiency from both human embryonic and human induced-Pluripotent Stem Cells (hPSC). hPSC-derived cardiomyocytes (hPSC-CMs) are increasingly recognized as having great value for modeling cardiovascular diseases in humans, especially arrhythmia syndromes.
Integrating Subject Pathfinders into Online Catalogs.

Science.gov (United States)

Jarvis, William E.

1985-01-01

Discusses the integration of subject pathfinders into online public access catalogs (OPAC) through following features: within the OPAC, offline user guide manuals, remotely printed upon user request, or online as saved searches displayed in help screen format. Excerpts of a pathfinder display for biotechnology are presented. Four sources are…
File list: ALL.PSC.50.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.50.AllAg.iPS_cells mm9 All antigens Pluripotent stem cell iPS cells SRX9773...1,SRX035985,SRX1090869 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.50.AllAg.iPS_cells.bed ...
File list: ALL.PSC.50.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.50.AllAg.iPS_cells hg19 All antigens Pluripotent stem cell iPS cells SRX088...16,SRX189400,SRX189399 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/ALL.PSC.50.AllAg.iPS_cells.bed ...
File list: ALL.PSC.20.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.20.AllAg.iPS_cells hg19 All antigens Pluripotent stem cell iPS cells SRX088...27,SRX189400,SRX189399 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/ALL.PSC.20.AllAg.iPS_cells.bed ...
File list: ALL.PSC.20.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.20.AllAg.iPS_cells mm9 All antigens Pluripotent stem cell iPS cells SRX9773...30,SRX146522,SRX146547 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.20.AllAg.iPS_cells.bed ...
File list: Pol.PSC.05.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.05.AllAg.iPS_cells mm9 RNA polymerase Pluripotent stem cell iPS cells SRX97...7435,SRX027462,SRX977434 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.05.AllAg.iPS_cells.bed ...
Star Formation In Nearby Clouds (SFiNCs): X-Ray and Infrared Source Catalogs and Membership

Energy Technology Data Exchange (ETDEWEB)

Getman, Konstantin V.; Broos, Patrick S.; Feigelson, Eric D.; Richert, Alexander J. W.; Ota, Yosuke [Department of Astronomy and Astrophysics, 525 Davey Laboratory, Pennsylvania State University, University Park, PA 16802 (United States); Kuhn, Michael A. [Instituto de Fisica y Astronomia, Universidad de Valparaiso, Gran Bretana 1111, Playa Ancha, Valparaiso (Chile); Millennium Institute of Astrophysics, MAS (Chile); Bate, Matthew R. [Department of Physics and Astronomy, University of Exeter, Stocker Road, Exeter, Devon EX4 4SB (United Kingdom); Garmire, Gordon P. [Huntingdon Institute for X-Ray Astronomy, LLC, 10677 Franks Road, Huntingdon, PA 16652 (United States)

2017-04-01

The Star Formation in Nearby Clouds (SFiNCs) project is aimed at providing a detailed study of the young stellar populations and of star cluster formation in the nearby 22 star-forming regions (SFRs) for comparison with our earlier MYStIX survey of richer, more distant clusters. As a foundation for the SFiNCs science studies, here, homogeneous data analyses of the Chandra X-ray and Spitzer mid-infrared archival SFiNCs data are described, and the resulting catalogs of over 15,300 X-ray and over 1,630,000 mid-infrared point sources are presented. On the basis of their X-ray/infrared properties and spatial distributions, nearly 8500 point sources have been identified as probable young stellar members of the SFiNCs regions. Compared to the existing X-ray/mid-infrared publications, the SFiNCs member list increases the census of YSO members by 6%–200% for individual SFRs and by 40% for the merged sample of all 22 SFiNCs SFRs.
Modelling neurodegenerative diseases in vitro: Recent advances in 3D iPSC technologies

Directory of Open Access Journals (Sweden)

Elodie J Siney

2018-03-01

Full Text Available The discovery of induced pluripotent stem cells (iPSC 12 years ago has fostered the development of innovative patient-derived in vitro models for better understanding of disease mechanisms. This is particularly relevant to neurodegenerative diseases, where availability of live human brain tissue for research is limited and post-mortem interval changes influence readouts from autopsy-derived human tissue. Hundreds of iPSC lines have now been prepared and banked, thanks to several large scale initiatives and cell banks. Patient- or engineered iPSC-derived neural models are now being used to recapitulate cellular and molecular aspects of a variety of neurodegenerative diseases, including early and pre-clinical disease stages. The broad relevance of these models derives from the availability of a variety of differentiation protocols to generate disease-specific cell types and the manipulation to either introduce or correct disease-relevant genetic modifications. Moreover, the use of chemical and physical three-dimensional (3D matrices improves control over the extracellular environment and cellular organization of the models. These iPSC-derived neural models can be utilised to identify target proteins and, importantly, provide high-throughput screening for drug discovery. Choosing Alzheimer’s disease (AD as an example, this review describes 3D iPSC-derived neural models and their advantages and limitations. There is now a requirement to fully characterise and validate these 3D iPSC-derived neural models as a viable research tool that is capable of complementing animal models of neurodegeneration and live human brain tissue. With further optimization of differentiation, maturation and aging protocols, as well as the 3D cellular organisation and extracellular matrix to recapitulate more closely, the molecular extracellular-environment of the human brain, 3D iPSC-derived models have the potential to deliver new knowledge, enable discovery of novel
Generation of iPSC lines from primary human chorionic villi cells

Directory of Open Access Journals (Sweden)

Björn Lichtner

2015-11-01

Full Text Available Primary human chorionic villi (CV cells were used to generate the iPSC line by retroviral transduction of the four Yamanaka-factors OCT4, SOX2, KLF4 and c-MYC. Pluripotency was confirmed both in vivo and in vitro. The transcriptomes of the CV-derived iPSC lines and the human embryonic stem cell lines—H1 and H9 have a Pearson correlation of 0.929 and 0.943 respectively.
Catalog of solar particle events 1955--1969

International Nuclear Information System (INIS)

Anon.

1975-01-01

This catalog, which is a common enterprise of solar physicists and space scientists, consists of three parts. The first part contains a complete list of 732 particle events of solar origin recorded at the Earth or in space from the first PCA observation in 1955 up to the end of 1969; it thus covers two solar cycle maxima. Each particle event is described in detail by using many unpublished data, kindly made available by more than 20 space scientists. A group of solar experts has tried to look up the source, or alternative sources, of each particle event on the Sun. These sources (with estimates of ''certainty'') are presented, and all the flares which have been considered to be obvious or probable sources of the particle events are summarized in the second part of the catalog, with a description of their characteristic features in the optical, radio, and X-ray spectral range. Finally, the third part describes the active regions in which these flares occurred, including magnetic field maps, plage and sunspot group configurations, flare positions (often with flare photographs), data on the active region development, and bibliography
File list: ALL.PSC.10.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.10.AllAg.iPS_cells mm9 All antigens Pluripotent stem cell iPS cells SRX9774...30,SRX146524,SRX146547,SRX146522 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.10.AllAg.iPS_cells.bed ...
Faint Object Detection in Multi-Epoch Observations via Catalog Data Fusion

Energy Technology Data Exchange (ETDEWEB)

Budavári, Tamás; Szalay, Alexander S. [Department of Physics and Astronomy, The Johns Hopkins University, 3400 North Charles Street, Baltimore, MD 21218 (United States); Loredo, Thomas J. [Cornell Center for Astrophysics and Planetary Science, Cornell University, Ithaca, NY 14853 (United States)

2017-03-20

Astronomy in the time-domain era faces several new challenges. One of them is the efficient use of observations obtained at multiple epochs. The work presented here addresses faint object detection and describes an incremental strategy for separating real objects from artifacts in ongoing surveys. The idea is to produce low-threshold single-epoch catalogs and to accumulate information across epochs. This is in contrast to more conventional strategies based on co-added or stacked images. We adopt a Bayesian approach, addressing object detection by calculating the marginal likelihoods for hypotheses asserting that there is no object or one object in a small image patch containing at most one cataloged source at each epoch. The object-present hypothesis interprets the sources in a patch at different epochs as arising from a genuine object; the no-object hypothesis interprets candidate sources as spurious, arising from noise peaks. We study the detection probability for constant-flux objects in a Gaussian noise setting, comparing results based on single and stacked exposures to results based on a series of single-epoch catalog summaries. Our procedure amounts to generalized cross-matching: it is the product of a factor accounting for the matching of the estimated fluxes of the candidate sources and a factor accounting for the matching of their estimated directions. We find that probabilistic fusion of multi-epoch catalogs can detect sources with similar sensitivity and selectivity compared to stacking. The probabilistic cross-matching framework underlying our approach plays an important role in maintaining detection sensitivity and points toward generalizations that could accommodate variability and complex object structure.
Faint Object Detection in Multi-Epoch Observations via Catalog Data Fusion

International Nuclear Information System (INIS)

Budavári, Tamás; Szalay, Alexander S.; Loredo, Thomas J.

2017-01-01

Astronomy in the time-domain era faces several new challenges. One of them is the efficient use of observations obtained at multiple epochs. The work presented here addresses faint object detection and describes an incremental strategy for separating real objects from artifacts in ongoing surveys. The idea is to produce low-threshold single-epoch catalogs and to accumulate information across epochs. This is in contrast to more conventional strategies based on co-added or stacked images. We adopt a Bayesian approach, addressing object detection by calculating the marginal likelihoods for hypotheses asserting that there is no object or one object in a small image patch containing at most one cataloged source at each epoch. The object-present hypothesis interprets the sources in a patch at different epochs as arising from a genuine object; the no-object hypothesis interprets candidate sources as spurious, arising from noise peaks. We study the detection probability for constant-flux objects in a Gaussian noise setting, comparing results based on single and stacked exposures to results based on a series of single-epoch catalog summaries. Our procedure amounts to generalized cross-matching: it is the product of a factor accounting for the matching of the estimated fluxes of the candidate sources and a factor accounting for the matching of their estimated directions. We find that probabilistic fusion of multi-epoch catalogs can detect sources with similar sensitivity and selectivity compared to stacking. The probabilistic cross-matching framework underlying our approach plays an important role in maintaining detection sensitivity and points toward generalizations that could accommodate variability and complex object structure.
Retrospective Catalog Conversion in Mid-Sized Law Libraries: Some Practical Guidelines for Automation.

Science.gov (United States)

Riger, Robert E.

1992-01-01

Discusses retrospective catalog conversion from the viewpoint of a law firm library. Topics discussed include reasons for retrospective conversion; preplanning; suggestions for the selection of software; conducting an inventory of the collection; sources of MARC bibliographic records; setting up an online public access catalog; and marketing…
Repressed SIRT1/PGC-1α pathway and mitochondrial disintegration in iPSC-derived RPE disease model of age-related macular degeneration.

Science.gov (United States)

Golestaneh, Nady; Chu, Yi; Cheng, Shuk Kei; Cao, Hong; Poliakov, Eugenia; Berinstein, Daniel M

2016-12-20

Study of age related macular degeneration (AMD) has been hampered by lack of human models that represent the complexity of the disease. Here we have developed a human in vitro disease model of AMD to investigate the underlying AMD disease mechanisms. Generation of iPSCs from retinal pigment epithelium (RPE) of AMD donors, age-matched normal donors, skin fibroblasts of a dry AMD patient, and differentiation of iPSCs into RPE (AMD RPE-iPSC-RPE, normal RPE-iPSC-RPE and AMD Skin-iPSC-RPE, respectively). Immunostaining, cell viability assay and reactive oxygen species (ROS) production under oxidative stress conditions, electron microscopy (EM) imaging, ATP production and glycogen concentration assays, quantitative real time PCR, western blot, karyotyping. The AMD RPE-iPSC-RPE and AMD Skin-iPSC-RPE present functional impairment and exhibit distinct disease phenotypes compared to RPE-iPSC-RPE generated from normal donors (Normal RPE-iPSC-RPE). The AMD RPE-iPSC-RPE and AMD Skin-iPSC-RPE show increased susceptibility to oxidative stress and produced higher levels of reactive oxygen species (ROS) under stress in accordance with recent reports. The susceptibility to oxidative stress-induced cell death in AMD RPE-iPSC-RPE and Skin-iPSC-RPE was consistent with inability of the AMD RPE-iPSC-RPE and Skin-iPSC-RPE to increase SOD2 expression under oxidative stress. Phenotypic analysis revealed disintegrated mitochondria, accumulation of autophagosomes and lipid droplets in AMD RPE-iPSC-RPE and AMD Skin-iPSC-RPE. Mitochondrial activity was significantly lower in AMD RPE-iPSC-RPE and AMD Skin-iPSC-RPE compared to normal cells and glycogen concentration was significantly increased in the diseased cells. Furthermore, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha (PGC-1α), a regulator of mitochondrial biogenesis and function was repressed, and lower expression levels of NAD-dependent deacetylase sirtuin1 (SIRT1) were found in AMD RPE-iPSC-RPE and AMD Skin-iPSC
File list: InP.PSC.05.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.PSC.10.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.PSC.50.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.PSC.20.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.PSC.50.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.PSC.10.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Oth.PSC.05.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.PSC.50.AllAg.EpiLC [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.PSC.20.AllAg.Embryoid_Bodies [Chip-atlas[Archive

Lifescience Database Archive (English)

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From iPSC towards cardiac tissue-a road under construction.

Science.gov (United States)

Peischard, Stefan; Piccini, Ilaria; Strutz-Seebohm, Nathalie; Greber, Boris; Seebohm, Guiscard

2017-10-01

The possibility to generate induced pluripotent stem cells (iPSC) opens the way to generate virtually all cell types of our human body. In combination with modern gene editing techniques like CRISPR/CAS, a new set of powerful tools becomes available for life science. Scientific fields like genotype and cell type-specific pharmacology, disease modeling, stem cell biology, and developmental biology have been dramatically fostered and their faces have been changed. However, as golden as the age of iPSC-derived cells and their manipulation has started, the shine begins to tarnish. Researchers face more and more practical problems intrinsic to the system. These problems are related to the specific culturing conditions which are not yet sufficient to mimic the natural environment of native stem cells differentiating towards adult cells. However, researchers work hard to uncover these factors. Here, we review a common standard approach to generate iPSCs and transduce these to iPSC cardiomyocytes. Further, we review recent achievements and discuss their current limitations and future perspectives. We are on track, but the road is still under construction.
File list: NoD.PSC.05.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.PSC.20.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: NoD.PSC.20.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.PSC.50.AllAg.mESCs,_differentiated [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.50.AllAg.mESCs,_differentiated mm9 Input control Pluripotent stem cell mESCs, differentia...,SRX388447 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.50.AllAg.mESCs,_differentiated.bed ...
Possible systematics in the VLBI catalogs as seen from Gaia

Science.gov (United States)

Liu, N.; Zhu, Z.; Liu, J.-C.

2018-01-01

Aims: In order to investigate the systematic errors in the very long baseline interferometry (VLBI) positions of extragalactic sources (quasars) and the global differences between Gaia and VLBI catalogs, we use the first data release of Gaia (Gaia DR1) quasar positions as the reference and study the positional offsets of the second realization of the International Celestial Reference Frame (ICRF2) and the Goddard VLBI solution 2016a (gsf2016a) catalogs. Methods: We select a sample of 1032 common sources among three catalogs and adopt two methods to represent the systematics: considering the differential orientation (offset) and declination bias; analyzing with the vector spherical harmonics (VSH) functions. Results: Between two VLBI catalogs and Gaia DR1, we find that: i) the estimated orientation is consistent with the alignment accuracy of Gaia DR1 to ICRF, of 0.1 mas, but the southern and northern hemispheres show opposite orientations; ii) the declination bias in the southern hemisphere between Gaia DR1 and ICRF2 is estimated to be +152 μas, much larger than that between Gaia DR1 and gsf2016a which is +34 μas. Between two VLBI catalogs, we find that: i) the rotation component shows that ICRF2 and gsf2016a are generally consistent within 30 μas; ii) the glide component and quadrupole component report two declination-dependent offsets: dipolar deformation of +50 μas along the Z-axis, and quadrupolar deformation of -50 μas that would induce a pattern of sin2δ. Conclusions: The significant declination bias between Gaia DR1 and ICRF2 catalogs reported in previous studies is possibly attributed to the systematic errors of ICRF2 in the southern hemisphere. The global differences between ICRF2 and gsf2016a catalogs imply that possible, mainly declination-dependent systematics exit in the VLBI positions and need further investigations in the future Gaia data release and the next generation of ICRF.
9+ Years of CALIPSO PSC Observations: An Evolving Climatology

Science.gov (United States)

Pitts, Michael C.; Poole, Lamont R.

2015-01-01

Polar stratospheric clouds (PSCs) play a crucial role in the springtime chemical depletion of ozone at high latitudes. PSC particles (primarily supercooled ternary solution, or STS droplets) provide sites for heterogeneous chemical reactions that transform stable chlorine and bromine reservoir species into highly reactive ozone-destructive forms. Furthermore, large nitric acid trihydrate (NAT) PSC particles can irreversibly redistribute odd nitrogen through gravitational sedimentation (a process commonly known as denitrification), which prolongs the ozone depletion process by slowing the reformation of the stable chlorine reservoirs. Spaceborne observations from the CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization) lidar on the CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations) satellite are providing a rich new dataset for studying PSCs. CALIPSO is an excellent platform for studying polar processes with CALIOP acquiring, on average, over 300,000 backscatter profiles daily at latitudes between 55o and 82o in both hemispheres. PSCs are detected in the CALIOP backscatter profiles using a successive horizontal averaging scheme that enables detection of strongly scattering PSCs (e.g., ice) at the finest possible spatial resolution (5 km), while enhancing the detection of very tenuous PSCs (e.g., low number density NAT) at larger spatial scales (up to 135 km). CALIOP PSCs are separated into composition classes (STS; liquid/NAT mixtures; and ice) based on the ensemble 532-nm scattering ratio (the ratio of total-to-molecular backscatter) and 532-nm particulate depolarization ratio (which is sensitive to the presence of non-spherical, i.e. NAT and ice particles). In this paper, we will provide an overview of the CALIOP PSC detection and composition classification algorithm and then examine the vertical and spatial distribution of PSCs in the Arctic and Antarctic on vortex-wide scales for entire PSC seasons over the more than nine-year data
A Comparative View on Human Somatic Cell Sources for iPSC Generation

Directory of Open Access Journals (Sweden)

Stefanie Raab

2014-01-01

Full Text Available The breakthrough of reprogramming human somatic cells was achieved in 2006 by the work of Yamanaka and Takahashi. From this point, fibroblasts are the most commonly used primary somatic cell type for the generation of induced pluripotent stem cells (iPSCs. Various characteristics of fibroblasts supported their utilization for the groundbreaking experiments of iPSC generation. One major advantage is the high availability of fibroblasts which can be easily isolated from skin biopsies. Furthermore, their cultivation, propagation, and cryoconservation properties are uncomplicated with respect to nutritional requirements and viability in culture. However, the required skin biopsy remains an invasive approach, representing a major drawback for using fibroblasts as the starting material. More and more studies appeared over the last years, describing the reprogramming of other human somatic cell types. Cells isolated from blood samples or urine, as well as more unexpected cell types, like pancreatic islet beta cells, synovial cells, or mesenchymal stromal cells from wisdom teeth, show promising characteristics for a reprogramming strategy. Here, we want to highlight the advantages of keratinocytes from human plucked hair as a widely usable, noninvasive harvesting method for primary material in comparison with other commonly used cell types.
PSC Matrix for Active GSA Schedules and GSA GWACs

Data.gov (United States)

General Services Administration — The Product Service Codes (PSC) and North American Industrial Classification Systems (NAICS) are the two methods the Federal government classifies contracts. They...
File list: DNS.PSC.50.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: His.PSC.50.AllAg.iPS_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.50.AllAg.iPS_cells mm9 Histone Pluripotent stem cell iPS cells SRX977417,SR...RX127376,SRX146530,SRX146522,SRX146547,SRX333561,SRX035985,SRX1090869 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.50.AllAg.iPS_cells.bed ...
VizieR Online Data Catalog: GOODS-MUSIC catalog updated version (Santini+, 2009)

Science.gov (United States)

Santini, P.; Fontana, A.; Grazian, A.; Salimbeni, S.; Fiore, F.; Fontanot, F.; Boutsia, K.; Castelllano, M.; Cristiani, S.; de Santis, C.; Gallozzi, S.; Giallongo, E.; Nonino, M.; Menci, N.; Paris, D.; Pentericci, L.; Vanzella, E.

2009-06-01

The GOODS-MUSIC multiwavelength catalog provides photometric and spectroscopic information for galaxies in the GOODS Southern field. It includes two U images obtained with the ESO 2.2m telescope and one U band image from VLT-VIMOS, the ACS-HST images in four optical (B,V,i,z) bands, the VLT-ISAAC J, H, and Ks bands as well as the Spitzer images at 3.6, 4.5, 5.8, and 8 micron (IRAC) and 24 micron (MIPS). Most of these images have been made publicly available in the coadded version by the GOODS team, while the U band data were retrieved in raw format and reduced by our team. We also collected all the available spectroscopic information from public spectroscopic surveys and cross-correlated the spectroscopic redshifts with our photometric catalog. For the unobserved fraction of the objects, we applied our photometric redshift code to obtain well-calibrated photometric redshifts. The final catalog is made up of 15208 objects, with 209 known stars and 61 AGNs. The major new feature of this updated release is the inclusion of 24 micron photometry. Further improvements concern a revised photometry in the four IRAC bands (mainly based on the use of new PSF-matching kernerls and on a revised procedure for estimating the background), the enlargement of the sample of galaxies with spectroscopic redshifts, the addition of objects selected on the IRAC 4.5 micron image and a more careful selection of AGN sources. (1 data file).
Electrophysiological Characteristics of Human iPSC-Derived Cardiomyocytes for the Assessment of Drug-Induced Proarrhythmic Potential.

Directory of Open Access Journals (Sweden)

Wataru Yamamoto

Full Text Available The aims of this study were to (1 characterize basic electrophysiological elements of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs that correspond to clinical properties such as QT-RR relationship, (2 determine the applicability of QT correction and analysis methods, and (3 determine if and how these in-vitro parameters could be used in risk assessment for adverse drug-induced effects such as Torsades de pointes (TdP. Field potential recordings were obtained from commercially available hiPSC-CMs using multi-electrode array (MEA platform with and without ion channel antagonists in the recording solution. Under control conditions, MEA-measured interspike interval and field potential duration (FPD ranged widely from 1049 to 1635 ms and from 334 to 527 ms, respectively and provided positive linear regression coefficients similar to native QT-RR plots obtained from human electrocardiogram (ECG analyses in the ongoing cardiovascular-based Framingham Heart Study. Similar to minimizing the effect of heart rate on the QT interval, Fridericia's and Bazett's corrections reduced the influence of beat rate on hiPSC-CM FPD. In the presence of E-4031 and cisapride, inhibitors of the rapid delayed rectifier potassium current, hiPSC-CMs showed reverse use-dependent FPD prolongation. Categorical analysis, which is usually applied to clinical QT studies, was applicable to hiPSC-CMs for evaluating torsadogenic risks with FPD and/or corrected FPD. Together, this results of this study links hiPSC-CM electrophysiological endpoints to native ECG endpoints, demonstrates the appropriateness of clinical analytical practices as applied to hiPSC-CMs, and suggests that hiPSC-CMs are a reliable models for assessing the arrhythmogenic potential of drug candidates in human.
Human iPSC for Therapeutic Approaches to the Nervous System: Present and Future Applications

Directory of Open Access Journals (Sweden)

Maria Giuseppina Cefalo

2016-01-01

Full Text Available Many central nervous system (CNS diseases including stroke, spinal cord injury (SCI, and brain tumors are a significant cause of worldwide morbidity/mortality and yet do not have satisfying treatments. Cell-based therapy to restore lost function or to carry new therapeutic genes is a promising new therapeutic approach, particularly after human iPSCs became available. However, efficient generation of footprint-free and xeno-free human iPSC is a prerequisite for their clinical use. In this paper, we will first summarize the current methodology to obtain footprint- and xeno-free human iPSC. We will then review the current iPSC applications in therapeutic approaches for CNS regeneration and their use as vectors to carry proapoptotic genes for brain tumors and review their applications for modelling of neurological diseases and formulating new therapeutic approaches. Available results will be summarized and compared. Finally, we will discuss current limitations precluding iPSC from being used on large scale for clinical applications and provide an overview of future areas of improvement. In conclusion, significant progress has occurred in deriving iPSC suitable for clinical use in the field of neurological diseases. Current efforts to overcome technical challenges, including reducing labour and cost, will hopefully expedite the integration of this technology in the clinical setting.

File list: NoD.PSC.20.AllAg.STAP_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: NoD.PSC.05.AllAg.STAP_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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Co-existence of Distinct Prion Types Enables Conformational Evolution of Human PrPSc by Competitive Selection*

Science.gov (United States)

Haldiman, Tracy; Kim, Chae; Cohen, Yvonne; Chen, Wei; Blevins, Janis; Qing, Liuting; Cohen, Mark L.; Langeveld, Jan; Telling, Glenn C.; Kong, Qingzhong; Safar, Jiri G.

2013-01-01

The unique phenotypic characteristics of mammalian prions are thought to be encoded in the conformation of pathogenic prion proteins (PrPSc). The molecular mechanism responsible for the adaptation, mutation, and evolution of prions observed in cloned cells and upon crossing the species barrier remains unsolved. Using biophysical techniques and conformation-dependent immunoassays in tandem, we isolated two distinct populations of PrPSc particles with different conformational stabilities and aggregate sizes, which frequently co-exist in the most common human prion disease, sporadic Creutzfeldt-Jakob disease. The protein misfolding cyclic amplification replicates each of the PrPSc particle types independently and leads to the competitive selection of those with lower initial conformational stability. In serial propagation with a nonglycosylated mutant PrPC substrate, the dominant PrPSc conformers are subject to further evolution by natural selection of the subpopulation with the highest replication rate due to its lowest stability. Cumulatively, the data show that sporadic Creutzfeldt-Jakob disease PrPSc is not a single conformational entity but a dynamic collection of two distinct populations of particles. This implies the co-existence of different prions, whose adaptation and evolution are governed by the selection of progressively less stable, faster replicating PrPSc conformers. PMID:23974118
E-serials cataloging access to continuing and integrating resources via the catalog and the web

CERN Document Server

Cole, Jim

2014-01-01

This comprehensive guide examines the state of electronic serials cataloging with special attention paid to online capacities. E-Serials Cataloging: Access to Continuing and Integrating Resources via the Catalog and the Web presents a review of the e-serials cataloging methods of the 1990s and discusses the international standards (ISSN, ISBD[ER], AACR2) that are applicable. It puts the concept of online accessibility into historical perspective and offers a look at current applications to consider. Practicing librarians, catalogers and administrators of technical services, cataloging and serv
Cadmium and lead accumulations and agronomic quality of a newly bred pollution-safe cultivar (PSC) of water spinach.

Science.gov (United States)

Huang, Ying-Ying; Mu, Yang-Xiu; He, Chun-Tao; Fu, Hui-Ling; Wang, Xue-Song; Gong, Fei-Yue; Yang, Zhong-Yi

2018-04-01

Breeding for pollution-safe cultivars (PSCs) can reduce pollutant accumulation in crops. However, the PSC breeding would face the risk of nutritional quality reduction, which is usually ignored in conventional breeding programs targeting to increase crop yield or nutritional quality. Thus, the doubt whether the risk would exist has to be clarified for supporting the PSC breeding. In the present study, a newly bred Cd/Pb-PSC of water spinach (Ipomoea aquatic Forsk.) and its parents (QLQ with low-Cd/Pb accumulation ability and T308 with high yield) of water spinach were employed to clarify the above-mentioned issue. Yields, and concentrations of Cd, Pb, nitrite, and organic and inorganic nutrients in shoots of the three experimental lines were determined. There were no significant differences in Cd/Pb concentration between the new PSC and QLQ, in nitrite content between the new PSC and its two parents and in yield between the new PSC and T308. It is decisively significant that shoot concentrations of organic and inorganic nutrients in the Cd/Pb-PSC were as high as those in one of its parents. It is affirmed that the breeding operations (crossing and consequently continuous selfing) for lowering Cd/Pb accumulation capacity of water spinach would not lower the nutritional values of the obtained Cd/Pb-PSCs from the breeding, which should be a pillar that supports the feasibility to minimize Cd/Pb pollution in vegetables using PSC-breeding method.
OCRWM [Office of Civilian Radioactive Waste Management] publications catalog on high-level radioactive waste management

International Nuclear Information System (INIS)

1987-07-01

The US Department of Energy's (DOE's) Office of Civilian Radioactive Waste Management (OCRWM) is publishing this catalog to provide citations of selected technical and public information on the subject of high-level radioactive waste management. The catalog is a resource and reference tool. It will be updated and printed annually. The online catalog will be available for review through OCRWM's Product Record System (PRS) and can eventually be made available to the public. The printed catalog version is suitable for libraries and those individuals needing either a broad base of information or a particular source; the computerized catalog version provides the most current information resources available, since updates to citations will be made as they are received. The number of documents suitable for listing in this catalog is expected to grow significantly each year
The 2HWC HAWC Observatory Gamma-Ray Catalog

Energy Technology Data Exchange (ETDEWEB)

Abeysekara, A. U.; Barber, A. S. [Department of Physics and Astronomy, University of Utah, Salt Lake City, UT (United States); Albert, A. [Physics Division, Los Alamos National Laboratory, Los Alamos, NM (United States); Alfaro, R.; Becerril, A.; Belmont-Moreno, E. [Instituto de Física, Universidad Nacional Autónoma de México, Mexico City (Mexico); Alvarez, C.; Arceo, R.; Caballero-Mora, K. S. [Universidad Autónoma de Chiapas, Tuxtla Gutiérrez, Chiapas (Mexico); Álvarez, J. D.; Arteaga-Velázquez, J. C. [Universidad Michoacana de San Nicolás de Hidalgo, Morelia (Mexico); Solares, H. A. Ayala; Brisbois, C. [Department of Physics, Michigan Technological University, Houghton, MI (United States); Baughman, B.; Berley, D. [Department of Physics, University of Maryland, College Park, MD (United States); Bautista-Elivar, N. [Universidad Politecnica de Pachuca, Pachuca, Hidalgo (Mexico); Gonzalez, J. Becerra [NASA Goddard Space Flight Center, Greenbelt, MD (United States); BenZvi, S. Y. [Department of Physics and Astronomy, University of Rochester, Rochester, NY (United States); Bernal, A. [Instituto de Astronomía, Universidad Nacional Autónoma de México, Mexico City (Mexico); Braun, J., E-mail: riviere@umdgrb.umd.edu [Department of Physics, University of Wisconsin-Madison, Madison, WI (United States); and others

2017-07-01

We present the first catalog of TeV gamma-ray sources realized with data from the newly completed High Altitude Water Cherenkov Observatory (HAWC). It is the most sensitive wide field-of-view TeV telescope currently in operation, with a one-year survey sensitivity of ∼5%–10% of the flux of the Crab Nebula. With an instantaneous field of view >1.5 sr and >90% duty cycle, it continuously surveys and monitors the sky for gamma-ray energies between hundreds of GeV and tens of TeV. HAWC is located in Mexico, at a latitude of 19° N, and was completed in 2015 March. Here, we present the 2HWC catalog, which is the result of the first source search performed with the complete HAWC detector. Realized with 507 days of data, it represents the most sensitive TeV survey to date for such a large fraction of the sky. A total of 39 sources were detected, with an expected number of false detections of 0.5 due to background fluctuation. Out of these sources, 19 are new sources that are not associated with previously known TeV sources (association criteria: <0.°5 away). The source list, including the position measurement, spectrum measurement, and uncertainties, is reported, then each source is briefly discussed. Of the 2HWC associated sources, 10 are reported in TeVCat as PWN or SNR: 2 as blazars and the remaining eight as unidentified.
Electrophysiological Analysis of human Pluripotent Stem Cell-derived Cardiomyocytes (hPSC-CMs) Using Multi-electrode Arrays (MEAs).

Science.gov (United States)

Sala, Luca; Ward-van Oostwaard, Dorien; Tertoolen, Leon G J; Mummery, Christine L; Bellin, Milena

2017-05-12

Cardiomyocytes can now be derived with high efficiency from both human embryonic and human induced-Pluripotent Stem Cells (hPSC). hPSC-derived cardiomyocytes (hPSC-CMs) are increasingly recognized as having great value for modeling cardiovascular diseases in humans, especially arrhythmia syndromes. They have also demonstrated relevance as in vitro systems for predicting drug responses, which makes them potentially useful for drug-screening and discovery, safety pharmacology and perhaps eventually for personalized medicine. This would be facilitated by deriving hPSC-CMs from patients or susceptible individuals as hiPSCs. For all applications, however, precise measurement and analysis of hPSC-CM electrical properties are essential for identifying changes due to cardiac ion channel mutations and/or drugs that target ion channels and can cause sudden cardiac death. Compared with manual patch-clamp, multi-electrode array (MEA) devices offer the advantage of allowing medium- to high-throughput recordings. This protocol describes how to dissociate 2D cell cultures of hPSC-CMs to small aggregates and single cells and plate them on MEAs to record their spontaneous electrical activity as field potential. Methods for analyzing the recorded data to extract specific parameters, such as the QT and the RR intervals, are also described here. Changes in these parameters would be expected in hPSC-CMs carrying mutations responsible for cardiac arrhythmias and following addition of specific drugs, allowing detection of those that carry a cardiotoxic risk.
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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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File list: His.PSC.50.AllAg.iPS_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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The NuSTAR Serendipitous Survey: The 40-month Catalog and the Properties of the Distant High-energy X-Ray Source Population

Science.gov (United States)

Lansbury, G. B.; Stern, D.; Aird, J.; Alexander, D. M.; Fuentes, C.; Harrison, F. A.; Treister, E.; Bauer, F. E.; Tomsick, J. A.; Baloković, M.; Del Moro, A.; Gandhi, P.; Ajello, M.; Annuar, A.; Ballantyne, D. R.; Boggs, S. E.; Brandt, W. N.; Brightman, M.; Chen, C.-T. J.; Christensen, F. E.; Civano, F.; Comastri, A.; Craig, W. W.; Forster, K.; Grefenstette, B. W.; Hailey, C. J.; Hickox, R. C.; Jiang, B.; Jun, H. D.; Koss, M.; Marchesi, S.; Melo, A. D.; Mullaney, J. R.; Noirot, G.; Schulze, S.; Walton, D. J.; Zappacosta, L.; Zhang, W. W.

2017-02-01

We present the first full catalog and science results for the Nuclear Spectroscopic Telescope Array (NuSTAR) serendipitous survey. The catalog incorporates data taken during the first 40 months of NuSTAR operation, which provide ≈20 Ms of effective exposure time over 331 fields, with an areal coverage of 13 deg2, and 497 sources detected in total over the 3-24 keV energy range. There are 276 sources with spectroscopic redshifts and classifications, largely resulting from our extensive campaign of ground-based spectroscopic follow-up. We characterize the overall sample in terms of the X-ray, optical, and infrared source properties. The sample is primarily composed of active galactic nuclei (AGNs), detected over a large range in redshift from z = 0.002 to 3.4 (median of =0.56), but also includes 16 spectroscopically confirmed Galactic sources. There is a large range in X-ray flux, from {log}({f}3-24{keV}/{erg} {{{s}}}-1 {{cm}}-2)≈ -14 to -11, and in rest-frame 10-40 keV luminosity, from {log}({L}10-40{keV}/{erg} {{{s}}}-1)≈ 39 to 46, with a median of 44.1. Approximately 79% of the NuSTAR sources have lower-energy ( {10}44 erg s-1) to ≈80% at the lowest luminosities ({L}{{X}}< {10}43 erg s-1). Our optical spectroscopic analysis finds that the observed fraction of optically obscured AGNs (I.e., the type 2 fraction) is {F}{Type2}={53}-15+14 % , for a well-defined subset of the 8-24 keV selected sample. This is higher, albeit at a low significance level, than the type 2 fraction measured for redshift- and luminosity-matched AGNs selected by <10 keV X-ray missions.
Contractile Defect Caused by Mutation in MYBPC3 Revealed under Conditions Optimized for Human PSC-Cardiomyocyte Function

Directory of Open Access Journals (Sweden)

Matthew J. Birket

2015-10-01

Full Text Available Maximizing baseline function of human pluripotent stem cell-derived cardiomyocytes (hPSC-CMs is essential for their effective application in models of cardiac toxicity and disease. Here, we aimed to identify factors that would promote an adequate level of function to permit robust single-cell contractility measurements in a human induced pluripotent stem cell (hiPSC model of hypertrophic cardiomyopathy (HCM. A simple screen revealed the collaborative effects of thyroid hormone, IGF-1 and the glucocorticoid analog dexamethasone on the electrophysiology, bioenergetics, and contractile force generation of hPSC-CMs. In this optimized condition, hiPSC-CMs with mutations in MYBPC3, a gene encoding myosin-binding protein C, which, when mutated, causes HCM, showed significantly lower contractile force generation than controls. This was recapitulated by direct knockdown of MYBPC3 in control hPSC-CMs, supporting a mechanism of haploinsufficiency. Modeling this disease in vitro using human cells is an important step toward identifying therapeutic interventions for HCM.
The Online Catalog Revolution.

Science.gov (United States)

Kilgour, Frederick G.

1984-01-01

A review of library technological development and card catalog innovations of the past century and a half precedes a discussion of online public access catalog development. Design requirements and purpose of the online catalog, access techniques and provisions, costs, and future integration are highlighted. Twenty-two references are listed. (EJS)
INTERACTION OF SEARCH CAPABILITIES OF ELECTRONIC AND TRADITIONAL (CARD CATALOGS

Directory of Open Access Journals (Sweden)

Л. В. Головко

2017-10-01

Full Text Available Purpose. Interaction of search capabilities of electronic and traditional (card catalogs. Subject: search capabilities of electronic and traditional (card catalogs and their interaction. Goal: Creating efficient search system for library information services, updating and improving the information retrieval system. To reach this goal, following tasks are set: – to determine the possibility of parallel functioning of electronic and traditional card catalogs, and to reveal the interaction of their search capabilities by conducting a survey via questionnaire titled «Interaction of search capabilities of electronic and traditional (card catalogs»; – to find out which search systems are preferred by users; – to estimate the actual condition of search capabilities of electronic and traditional (card catalogs in the library. Methodology. On various stages of the survey the following methods were used: analysis and synthesis, comparison, generalization, primary sources search; sociological method (survey. These methods allowed determining, processing and ana lyzing the whole complex of available sources, which became an important factor of research objectivity. Finding. Survey results allowed us to analyze the dynamics of changes, new needs of the readers, and to make a decision regarding the quality improvement of information search services. Practical value. Creating a theoretical foundation for implementation of set tasks is the practical value of the acquired findings. Conclusions and results of the research can be used in university students’, postgraduates’ and professors’ information search activities. Certain results of the research are used and implemented in practice of the library of Kryvyi Rih State Pedagogical University, namely at workshops on the basics of information culture (using bibliographic reference unit, information search by key words, authors and titles via electronic catalogue. Guides for users were created. Duty

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Lifescience Database Archive (English)

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How do PrPSc Prions Spread between Host Species, and within Hosts?

Directory of Open Access Journals (Sweden)

Neil A. Mabbott

2017-11-01

Full Text Available Prion diseases are sub-acute neurodegenerative diseases that affect humans and some domestic and free-ranging animals. Infectious prion agents are considered to comprise solely of abnormally folded isoforms of the cellular prion protein known as PrPSc. Pathology during prion disease is restricted to the central nervous system where it causes extensive neurodegeneration and ultimately leads to the death of the host. The first half of this review provides a thorough account of our understanding of the various ways in which PrPSc prions may spread between individuals within a population, both horizontally and vertically. Many natural prion diseases are acquired peripherally, such as by oral exposure, lesions to skin or mucous membranes, and possibly also via the nasal cavity. Following peripheral exposure, some prions accumulate to high levels within the secondary lymphoid organs as they make their journey from the site of infection to the brain, a process termed neuroinvasion. The replication of PrPSc prions within secondary lymphoid organs is important for their efficient spread to the brain. The second half of this review describes the key tissues, cells and molecules which are involved in the propagation of PrPSc prions from peripheral sites of exposure (such as the lumen of the intestine to the brain. This section also considers how additional factors such as inflammation and aging might influence prion disease susceptibility.
Mapping transcriptome profiles of in vitro iPSC-derived cardiac differentiation to in utero heart development

Directory of Open Access Journals (Sweden)

Xing Li

2016-03-01

Full Text Available The dataset includes microarray data (Affymetrix Mouse Genome 430 2.0 Array from WT and Nos3−/− mouse embryonic heart ventricular tissues at 14.5 days post coitum (E14.5, induced pluripotent stem cells (iPSCs derived from WT and Nos3−/− mouse tail tip fibroblasts, iPSC-differentiated cardiomyocytes at Day 11, and mouse embryonic stem cells (mESCs and differentiated cardiomyocytes as positive controls for mouse iPSC differentiation. Both in utero (using embryonic heart tissues and in vitro (using iPSCs and differentiated cells microarray datasets were deposited to the NCBI Gene Expression Omnibus (GEO database. The deposited data in GEO include raw microarray data, metadata for sample source information, experimental design, sample and data processing, and gene expression matrix. The data are available under GEO Access Number GSE69317 (GSE69315 for tissue sample microarray data, GSE69316 for iPSCs microarray data, http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc= GSE69317. Keywords: Induced pluripotent stem cell, Cardiac development, Nos3 knockout, Disease modeling, Microarray analysis
VizieR Online Data Catalog: Radio luminosity function of FSRQs (Mao+, 2017)

Science.gov (United States)

Mao, P.; Urry, C. M.; Marchesini, E.; Landoni, M.; Massaro, F.; Ajello, M.

2018-01-01

To build the largest sample of flat-spectrum radio quasars, we started with the radio catalog of the Faint Images of the Radio Sky at Twenty Centimeter (FIRST) survey (Helfand+ 2015, VIII/92), which covered 10575deg2 of the sky; and the Green Bank 6cm (GB6) Radio Source Catalog (Gregory+ 1996, VIII/40), which covered 17000deg2 of the sky. We cross-matched the radio position of each FIRST source with sources in the GB6 catalog, taking into account the positional uncertainties of both radio surveys. Of the 638 radio sources with flat radio spectra, 327 have an optical spectrum available in the literature, 266 from SDSS and the rest from various other sources identified through the NASA Extragalactic Database (NED). Out of the 327 objects with optical spectra classified, 200 were classified as FSRQs (of which 168 are free from contamination), 26 were classified as BL Lacs, 38 were classified as Seyferts, 41 were classified as Galaxies, 2 were classified as stars, and 12 and 8 indicated as noisy or uncertain, respectively. An additional 85 quasars (of which 74 are free from contamination) out of the 119 with a literature description were also included in the inclusive sample. See section 2 for more details on the sample selection. (2 data files).
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Toward standardization of slow earthquake catalog -Development of database website-

Science.gov (United States)

Kano, M.; Aso, N.; Annoura, S.; Arai, R.; Ito, Y.; Kamaya, N.; Maury, J.; Nakamura, M.; Nishimura, T.; Obana, K.; Sugioka, H.; Takagi, R.; Takahashi, T.; Takeo, A.; Yamashita, Y.; Matsuzawa, T.; Ide, S.; Obara, K.

2017-12-01

Slow earthquakes have now been widely discovered in the world based on the recent development of geodetic and seismic observations. Many researchers detect a wide frequency range of slow earthquakes including low frequency tremors, low frequency earthquakes, very low frequency earthquakes and slow slip events by using various methods. Catalogs of the detected slow earthquakes are open to us in different formats by each referring paper or through a website (e.g., Wech 2010; Idehara et al. 2014). However, we need to download catalogs from different sources, to deal with unformatted catalogs and to understand the characteristics of different catalogs, which may be somewhat complex especially for those who are not familiar with slow earthquakes. In order to standardize slow earthquake catalogs and to make such a complicated work easier, Scientific Research on Innovative Areas "Science of Slow Earthquakes" has been developing a slow earthquake catalog website. In the website, we can plot locations of various slow earthquakes via the Google Maps by compiling a variety of slow earthquake catalogs including slow slip events. This enables us to clearly visualize spatial relations among slow earthquakes at a glance and to compare the regional activities of slow earthquakes or the locations of different catalogs. In addition, we can download catalogs in the unified format and refer the information on each catalog on the single website. Such standardization will make it more convenient for users to utilize the previous achievements and to promote research on slow earthquakes, which eventually leads to collaborations with researchers in various fields and further understanding of the mechanisms, environmental conditions, and underlying physics of slow earthquakes. Furthermore, we expect that the website has a leading role in the international standardization of slow earthquake catalogs. We report the overview of the website and the progress of construction. Acknowledgment: This
Human pancreatic islet-derived extracellular vesicles modulate insulin expression in 3D-differentiating iPSC clusters.

Directory of Open Access Journals (Sweden)

Diana Ribeiro

Full Text Available It has been suggested that extracellular vesicles (EVs can mediate crosstalk between hormones and metabolites within pancreatic tissue. However, the possible effect of pancreatic EVs on stem cell differentiation into pancreatic lineages remains unknown. Herein, human islet-derived EVs (h-Islet-EVs were isolated, characterized and subsequently added to human induced pluripotent stem cell (iPSC clusters during pancreatic differentiation. The h-islet-EVs had a mean size of 117±7 nm and showed positive expression of CD63 and CD81 EV markers as measured by ELISA. The presence of key pancreatic transcription factor mRNA, such as NGN3, MAFA and PDX1, and pancreatic hormone proteins such as C-peptide and glucagon, were confirmed in h-Islet-EVs. iPSC clusters were differentiated in suspension and at the end stages of the differentiation protocol, the mRNA expression of the main pancreatic transcription factors and pancreatic hormones was increased. H-Islet-EVs were supplemented to the iPSC clusters in the later stages of differentiation. It was observed that h-Islet-EVs were able to up-regulate the intracellular levels of C-peptide in iPSC clusters in a concentration-dependent manner. The effect of h-Islet-EVs on the differentiation of iPSC clusters cultured in 3D-collagen hydrogels was also assessed. Although increased mRNA expression for pancreatic markers was observed when culturing the iPSC clusters in 3D-collagen hydrogels, delivery of EVs did not affect the insulin or C-peptide intracellular content. Our results provide new information on the role of h-Islet-EVs in the regulation of insulin expression in differentiating iPSC clusters, and are highly relevant for pancreatic tissue engineering applications.
The Updated Multiple Star Catalog

Science.gov (United States)

Tokovinin, Andrei

2018-03-01

The catalog of hierarchical stellar systems with three or more components is an update of the original 1997 version. For 2000 hierarchies, the new Multiple Star Catalog (MSC) provides distances, component masses and periods, and supplementary information (astrometry, photometry, identifiers, orbits, notes). The MSC content and format are explained, and its incompleteness and strong observational selection are stressed. Nevertheless, the MSC can be used for statistical studies and is a valuable source for planning observations of multiple stars. Rare classes of stellar hierarchies found in the MSC (with six or seven components, extremely eccentric orbits, planar and possibly resonant orbits, hosting planets) are briefly presented. High-order hierarchies have smaller velocity dispersion compared to triples and are often associated with moving groups. The paper concludes with an analysis of the ratio of periods and separations between inner and outer subsystems. In wide hierarchies, the ratio of semimajor axes, estimated statistically, is distributed between 3 and 300, with no evidence of dynamically unstable systems.
File list: His.PSC.10.H3K122ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.10.H3K122ac.AllCell mm9 Histone H3K122ac Pluripotent stem cell ERX631826,ER...X631814 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.10.H3K122ac.AllCell.bed ...
File list: His.PSC.05.H3K122ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.05.H3K122ac.AllCell mm9 Histone H3K122ac Pluripotent stem cell ERX631826,ER...X631814 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.05.H3K122ac.AllCell.bed ...
File list: His.PSC.50.H3K122ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.50.H3K122ac.AllCell mm9 Histone H3K122ac Pluripotent stem cell ERX631826,ER...X631814 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.50.H3K122ac.AllCell.bed ...
File list: DNS.PSC.50.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.50.AllAg.mESC_derived_pancreatic_cells mm9 DNase-seq Pluripotent stem cell mESC derived panc...reatic cells SRX404487 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.50.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: His.PSC.50.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.50.AllAg.mESC_derived_pancreatic_cells mm9 Histone Pluripotent stem cell mESC derived panc...reatic cells SRX146012,SRX146011 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.50.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: His.PSC.05.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.05.AllAg.mESC_derived_pancreatic_cells mm9 Histone Pluripotent stem cell mESC derived panc...reatic cells SRX146012,SRX146011 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.05.AllAg.mESC_derived_pancreatic_cells.bed ...

File list: His.PSC.10.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.10.AllAg.mESC_derived_pancreatic_cells mm9 Histone Pluripotent stem cell mESC derived panc...reatic cells SRX146012,SRX146011 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.10.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: DNS.PSC.10.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: DNS.PSC.20.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available DNS.PSC.20.AllAg.mESC_derived_pancreatic_cells mm9 DNase-seq Pluripotent stem cell mESC derived panc...reatic cells SRX404487 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/DNS.PSC.20.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: DNS.PSC.05.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Pol.PSC.20.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: ALL.PSC.05.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: DNS.PSC.05.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Pol.PSC.05.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.05.AllAg.mESC_derived_neural_cells mm9 RNA polymerase Pluripotent stem cell mESC derived neural...RX213764,SRX213760 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.05.AllAg.mESC_derived_neural_cells.bed ...
File list: DNS.PSC.50.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Pol.PSC.50.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: Pol.PSC.10.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Pol.PSC.10.AllAg.mESC_derived_neural_cells mm9 RNA polymerase Pluripotent stem cell mESC derived neural...RX213760,SRX213764 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Pol.PSC.10.AllAg.mESC_derived_neural_cells.bed ...
File list: DNS.PSC.10.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: ALL.PSC.50.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.50.AllAg.hESC_derived_neural_crests hg19 All antigens Pluripotent stem cell hESC derived neural...X1091539,SRX059364 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/ALL.PSC.50.AllAg.hESC_derived_neural_crests.bed ...
Boo! Outsourcing from the Cataloging Perspective.

Science.gov (United States)

Hill, Janet Swan

1998-01-01

Examines long-accepted ways library cataloging departments have used outsourcing (cataloging records, card production, authority control, card filling, and retrospective conversion) and potential outsourcing activities (original cataloging, and copy cataloging). Discusses reasons why outsourcing is controversial. (PEN)
File list: ALL.PSC.05.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.05.AllAg.hESC_derived_neural_cells hg19 All antigens Pluripotent stem cell hESC derived neural...RX729682,SRX729698,SRX729709 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/ALL.PSC.05.AllAg.hESC_derived_neural_cells.bed ...
File list: His.PSC.10.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.10.AllAg.hESC_derived_neural_crests hg19 Histone Pluripotent stem cell hESC derived neural...3,SRX1091531,SRX059364,SRX1091530 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.10.AllAg.hESC_derived_neural_crests.bed ...
File list: Oth.PSC.05.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.05.AllAg.mESC_derived_neural_cells mm9 TFs and others Pluripotent stem cell mESC derived neural...10563,SRX213763,SRX352996 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.05.AllAg.mESC_derived_neural_cells.bed ...
File list: His.PSC.20.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.20.AllAg.hESC_derived_neural_crests hg19 Histone Pluripotent stem cell hESC derived neural...30,SRX059362,SRX1091539,SRX059364 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.20.AllAg.hESC_derived_neural_crests.bed ...
File list: His.PSC.50.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.50.AllAg.hESC_derived_neural_crests hg19 Histone Pluripotent stem cell hESC derived neural...30,SRX059362,SRX1091539,SRX059364 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.50.AllAg.hESC_derived_neural_crests.bed ...
File list: Oth.PSC.50.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.50.AllAg.mESC_derived_neural_cells mm9 TFs and others Pluripotent stem cell mESC derived neural...13762,SRX213759,SRX352995 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/Oth.PSC.50.AllAg.mESC_derived_neural_cells.bed ...

VizieR Online Data Catalog: The VLBA Extragalactic Proper Motion Catalog (Truebenbach+, 2017)

Science.gov (United States)

Truebenbach, A. E.; Darling, J.

2017-11-01

We created our catalog of extragalactic radio proper motions using the 2017a Goddard VLBI global solution. The 2017a solution is computed from more than 30 years of dual-band VLBI observations --1979 August 3 to 2017 March 27. We also observed 28 objects with either no redshift or a "questionable" Optical Characteristic of Astrometric Radio Sources (OCARS; Malkin 2016ARep...60..996M) redshift at the Apache Point Observatory (APO) 3.5m telescope and/or at Gemini North. We conducted observations on the 3.5m telescope at Apache Point Observatory with the Dual Imaging Spectrograph (DIS) from 2015 April 18 to 2016 June 30. We chose two objects for additional observations with the Gemini Multi-Object Spectrograph-North (GMOS-N) at Gemini North Observatory. 2021+317 was observed on 2016 June 26 and 28, while 0420+417 was observed on 2016 November 8 and 26. We also observed 42 radio sources with the Very Long Baseline Array (VLBA) in the X-band (3.6cm/8.3GHz). Our targets had all been previously observed by VLBI. Our VLBA observations were conducted in two campaigns from 2015 September to 2016 January and 2016 October to November. The final extragalactic proper motion catalog (created primarily from archival Goddard VLBI data, with redshifts obtained from OCARS) contains 713 proper motions with average uncertainties of 24μas/yr. (5 data files).
File list: His.PSC.10.H3K56ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.10.H3K56ac.AllCell mm9 Histone H3K56ac Pluripotent stem cell SRX873352,SRX8...73346,SRX873350,SRX873348 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.10.H3K56ac.AllCell.bed ...
File list: His.PSC.50.H4K16ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.50.H4K16ac.AllCell mm9 Histone H4K16ac Pluripotent stem cell SRX212325,SRX2...98193,SRX212326,SRX298194 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.50.H4K16ac.AllCell.bed ...
File list: His.PSC.20.H4K16ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.20.H4K16ac.AllCell mm9 Histone H4K16ac Pluripotent stem cell SRX298193,SRX2...12325,SRX212326,SRX298194 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.20.H4K16ac.AllCell.bed ...
NASA Space Science Resource Catalog

Science.gov (United States)

Teays, T.

2000-05-01

The NASA Office of Space Science Resource Catalog provides a convenient online interface for finding space science products for use in classrooms, science museums, planetariums, and many other venues. Goals in developing this catalog are: (1) create a cataloging system for all NASA OSS education products, (2) develop a system for characterizing education products which is meaningful to a large clientele, (3) develop a mechanism for evaluating products, (4) provide a user-friendly interface to search and access the data, and (5) provide standardized metadata and interfaces to other cataloging and library systems. The first version of the catalog is being tested at the spring 2000 conventions of the National Science Teachers Association (NSTA) and the National Council of Teachers of Mathematics (NCTM) and will be released in summer 2000. The catalog may be viewed at the Origins Education Forum booth.
A Shared Infrastructure for Federated Search Across Distributed Scientific Metadata Catalogs

Science.gov (United States)

Reed, S. A.; Truslove, I.; Billingsley, B. W.; Grauch, A.; Harper, D.; Kovarik, J.; Lopez, L.; Liu, M.; Brandt, M.

2013-12-01

The vast amount of science metadata can be overwhelming and highly complex. Comprehensive analysis and sharing of metadata is difficult since institutions often publish to their own repositories. There are many disjoint standards used for publishing scientific data, making it difficult to discover and share information from different sources. Services that publish metadata catalogs often have different protocols, formats, and semantics. The research community is limited by the exclusivity of separate metadata catalogs and thus it is desirable to have federated search interfaces capable of unified search queries across multiple sources. Aggregation of metadata catalogs also enables users to critique metadata more rigorously. With these motivations in mind, the National Snow and Ice Data Center (NSIDC) and Advanced Cooperative Arctic Data and Information Service (ACADIS) implemented two search interfaces for the community. Both the NSIDC Search and ACADIS Arctic Data Explorer (ADE) use a common infrastructure which keeps maintenance costs low. The search clients are designed to make OpenSearch requests against Solr, an Open Source search platform. Solr applies indexes to specific fields of the metadata which in this instance optimizes queries containing keywords, spatial bounds and temporal ranges. NSIDC metadata is reused by both search interfaces but the ADE also brokers additional sources. Users can quickly find relevant metadata with minimal effort and ultimately lowers costs for research. This presentation will highlight the reuse of data and code between NSIDC and ACADIS, discuss challenges and milestones for each project, and will identify creation and use of Open Source libraries.
File list: NoD.PSC.05.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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File list: NoD.PSC.20.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: NoD.PSC.10.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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Lifescience Database Archive (English)

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File list: Oth.PSC.50.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available Oth.PSC.50.AllAg.hESC_derived_neural_crests hg19 TFs and others Pluripotent stem cell hESC derived neural...X1091550,SRX059360,SRX1091547,SRX059367,SRX059368 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/Oth.PSC.50.AllAg.hESC_derived_neural_crests.bed ...
Impact of Microbes on the Pathogenesis of Primary Biliary Cirrhosis (PBC and Primary Sclerosing Cholangitis (PSC

Directory of Open Access Journals (Sweden)

Jochen Mattner

2016-11-01

Full Text Available Primary biliary cirrhosis (PBC and primary sclerosing cholangitis (PSC represent the major clinical entities of chronic cholestatic liver diseases. Both disorders are characterized by portal inflammation and slowly progress to obliterative fibrosis and eventually liver cirrhosis. Although immune-pathogenic mechanisms have been implicated in the pathogenesis of PBC and PSC, neither disorder is considered to be a classical autoimmune disease, as PSC and PBC patients do not respond to immune-suppressants. Furthermore, the decreased bile flow resulting from the immune-mediated tissue assault and the subsequent accumulation of toxic bile products in PBC and PSC not only perpetuates biliary epithelial damage, but also alters the composition of the intestinal and biliary microbiota and its mutual interactions with the host. Consistent with the close association of PSC and inflammatory bowel disease (IBD, the polyclonal hyper IgM response in PBC and (auto-antibodies which cross-react to microbial antigens in both diseases, an expansion of individual microbes leads to shifts in the composition of the intestinal or biliary microbiota and a subsequent altered integrity of epithelial layers, promoting microbial translocation. These changes have been implicated in the pathogenesis of both devastating disorders. Thus, we will discuss here these recent findings in the context of novel and alternative therapeutic options.
A Unified Satellite-Observation Polar Stratospheric Cloud (PSC) Database for Long-Term Climate-Change Studies

Science.gov (United States)

Fromm, Michael; Pitts, Michael; Alfred, Jerome

2000-01-01

This report summarizes the project team's activity and accomplishments during the period 12 February, 1999 - 12 February, 2000. The primary objective of this project was to create and test a generic algorithm for detecting polar stratospheric clouds (PSC), an algorithm that would permit creation of a unified, long term PSC database from a variety of solar occultation instruments that measure aerosol extinction near 1000 nm The second objective was to make a database of PSC observations and certain relevant related datasets. In this report we describe the algorithm, the data we are making available, and user access options. The remainder of this document provides the details of the algorithm and the database offering.
File list: NoD.PSC.10.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.10.AllAg.hESC_derived_neural_crests hg19 No description Pluripotent stem cell hESC derived neural... crests http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/NoD.PSC.10.AllAg.hESC_derived_neural_crests.bed ...
File list: NoD.PSC.05.AllAg.iPS_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: NoD.PSC.20.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.20.AllAg.hESC_derived_neural_crests hg19 No description Pluripotent stem cell hESC derived neural... crests http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/NoD.PSC.20.AllAg.hESC_derived_neural_crests.bed ...
VizieR Online Data Catalog: NGC3115 & NGC1399 VEGAS-SSS globular clusters (Cantiello+, 2018)

Science.gov (United States)

Cantiello, M.; D'Abrusco, R.; Spavone, M.; Paolillo, M.; Capaccioli, M.; Limatola, L.; Grado, A.; Iodice, E.; Raimondo, G.; Napolitano, N.; Blakeslee, J. P.; Brocato, E.; Forbes, D. A.; Hilker, M.; Mieske, S.; Peletier, R.; van de Ven, G.; Schipani, P.

2017-11-01

Photometric catalogs for globular cluster (GC) candidates over the the 1 sq. degree area around NGC3115 and NGC1399 (ngc3115.dat and ngc1399.dat). The catalogues are based on u-, g- and i- band images from the VST elliptical galaxies survey (VEGAS). Aperture magnitudes, corrected for aperture correction are reported. We also provide the full catalogs of matched sources, which also include the matched background and foreground sources in the frames (ngc3115_full.dat and ngc1399_full.dat). (4 data files).
File list: His.PSC.20.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.20.AllAg.hESC_derived_neural_cells hg19 Histone Pluripotent stem cell hESC derived neural...710,SRX729692,SRX729688,SRX729689,SRX729698,SRX729709,SRX729699 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.20.AllAg.hESC_derived_neural_cells.bed ...

File list: ALL.PSC.50.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: His.PSC.50.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: ALL.PSC.05.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: His.PSC.05.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.05.AllAg.hESC_derived_neural_cells hg19 Histone Pluripotent stem cell hESC derived neural...707,SRX027494,SRX698181,SRX729681,SRX729682,SRX729698,SRX729709 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.05.AllAg.hESC_derived_neural_cells.bed ...
File list: ALL.PSC.20.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.20.AllAg.mESC_derived_neural_cells mm9 All antigens Pluripotent stem cell mESC derived neural...3762,SRX352996,SRX604259,SRX213763,SRX213761,SRX213764,SRX213758,SRX213757 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.20.AllAg.mESC_derived_neural_cells.bed ...
File list: ALL.PSC.10.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available ALL.PSC.10.AllAg.mESC_derived_neural_cells mm9 All antigens Pluripotent stem cell mESC derived neural...0564,SRX213764,SRX095620,SRX016838,SRX213758,SRX213761,SRX604259,SRX352996 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/ALL.PSC.10.AllAg.mESC_derived_neural_cells.bed ...
Instructing the Online Catalog User.

Science.gov (United States)

Miller, William

1986-01-01

This essay offers suggestions to make online public access catalogs (OPACs) less idiosyncratic and more usable. Discussion covers qualitative difference between online catalog and predecessors, challenge of debunking assumptions, skills for success, maintaining an instructional perspective, catalog development for the people by the people, and the…
Online Catalogs and Their Users.

Science.gov (United States)

Broadus, Robert N.

1983-01-01

Review of research on online public access catalogs sponsored by Council on Library Resources notes the scope and method (questionnaires administered to catalog users and nonusers in 29 participating institutions) and findings and applications (including organizational setting and computer system, catalog use and satisfaction, and implications).…
High-Content Electrophysiological Analysis of Human Pluripotent Stem Cell-Derived Cardiomyocytes (hPSC-CMs).

Science.gov (United States)

Kong, Chi-Wing; Geng, Lin; Li, Ronald A

2018-01-01

Considerable interest has been raised to develop human pluripotent stem cell-derived cardiomyocytes (hPSC-CMs) as a model for drug discovery and cardiotoxicity screening. High-content electrophysiological analysis of currents generated by transmembrane cell surface ion channels has been pursued to complement such emerging applications. Here we describe practical procedures and considerations for accomplishing successful assays of hPSC-CMs using an automated planar patch-clamp system.
File list: His.PSC.05.H2BS112GlcNAc.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.05.H2BS112GlcNAc.AllCell hg19 Histone H2BS112GlcNAc Pluripotent stem cell h...ttp://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.05.H2BS112GlcNAc.AllCell.bed ...
File list: NoD.PSC.10.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.10.AllAg.mESC_derived_pancreatic_cells mm9 No description Pluripotent stem cell mESC derived panc...reatic cells http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.10.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: NoD.PSC.20.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.20.AllAg.mESC_derived_pancreatic_cells mm9 No description Pluripotent stem cell mESC derived panc...reatic cells http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.20.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: NoD.PSC.50.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.50.AllAg.mESC_derived_pancreatic_cells mm9 No description Pluripotent stem cell mESC derived panc...reatic cells http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.50.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: InP.PSC.20.AllAg.iPS_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.20.AllAg.iPS_derived_neural_cells hg19 Input control Pluripotent stem cell iPS derived neural... cells SRX702550 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.PSC.20.AllAg.iPS_derived_neural_cells.bed ...
VizieR Online Data Catalog: IR photometry of AGNs in Swift/BAT 70 month cat. (Ichikawa+, 2017)

Science.gov (United States)

Ichikawa, K.; Ricci, C.; Ueda, Y.; Matsuoka, K.; Toba, Y.; Kawamuro, T.; Trakhtenbrot, B.; Koss, M. J.

2017-08-01

Our initial sample contains the 834 AGNs reported in the 70 month Swift/BAT catalog (Baumgartner+ 2013, J/ApJS/207/19), 105 of which are blazars. Of the remaining 729 sources, 697 sources have secure redshift information as presented in Ricci et al. (2016, ApJ, submitted). Next, we removed galaxy pairs or interacting galaxies not resolved in the BAT survey. Further, the 606 sources located at higher galactic latitudes with |b|>10° were selected to reduce the contamination in the crowded region through IR catalog matching. (1 data file).
ECOL Book Catalog.

Science.gov (United States)

Minneapolis Public Library, Minn. Environmental Conservation Library.

This catalog represents the collection of the Environmental Conservation Library oF Minnesota (ECOL) as of September 1973, when it contained over 2,800 titles of books and government documents, augmented by periodicals and substantial numbers of pamphlets, papers, brochures, and related materials. The catalog includes an author and main entry…
Catalogers and Competition.

Science.gov (United States)

Howden, Norman

1987-01-01

Reports the results of a literature review and a survey of catalogers which were conducted to study the problem of the decline in quantity and quality of applications for entry-level cataloging jobs. Factors studied included: competition between types of library professionals, automation, library education, the women's movement, and library…
Enhanced antioxidant capacity of dental pulp-derived iPSC-differentiated hepatocytes and liver regeneration by injectable HGF-releasing hydrogel in fulminant hepatic failure.

Science.gov (United States)

Chiang, Chih-Hung; Wu, Wai-Wah; Li, Hsin-Yang; Chien, Yueh; Sun, Cho-Chin; Peng, Chi-Hsien; Lin, Alex Tong-Long; Huang, Chi-Shuan; Lai, Ying-Hsiu; Chiou, Shih-Hwa; Hung, Shuen-Iu; Chang, Yuh-Lih; Lan, Yuan-Tzu; Liu, Dean-Mo; Chien, Chian-Shiu; Huo, Teh-Ia; Lee, Shou-Dong; Wang, Chien-Ying

2015-01-01

Acute hepatic failure (AHF) is a severe liver injury leading to sustained damage and complications. Induced pluripotent stem cells (iPSCs) may be an alternative option for the treatment of AHF. In this study, we reprogrammed human dental pulp-derived fibroblasts into iPSCs, which exhibited pluripotency and the capacity to differentiate into tridermal lineages, including hepatocyte-like cells (iPSC-Heps). These iPSC-Heps resembled human embryonic stem cell-derived hepatocyte-like cells in gene signature and hepatic markers/functions. To improve iPSC-Heps engraftment, we next developed an injectable carboxymethyl-hexanoyl chitosan hydrogel (CHC) with sustained hepatocyte growth factor (HGF) release (HGF-CHC) and investigated the hepatoprotective activity of HGF-CHC-delivered iPSC-Heps in vitro and in an immunocompromised AHF mouse model induced by thioacetamide (TAA). Intrahepatic delivery of HGF-CHC-iPSC-Heps reduced the TAA-induced hepatic necrotic area and rescued liver function and recipient viability. Compared with PBS-delivered iPSC-Heps, the HGF-CHC-delivered iPSC-Heps exhibited higher antioxidant and antiapoptotic activities that reduced hepatic necrotic area. Importantly, these HGF-CHC-mediated responses could be abolished by administering anti-HGF neutralizing antibodies. In conclusion, our findings demonstrated that HGF mediated the enhancement of iPSC-Hep antioxidant/antiapoptotic capacities and hepatoprotection and that HGF-CHC is as an excellent vehicle for iPSC-Hep engraftment in iPSC-based therapy against AHF.
File list: NoD.PSC.10.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.10.AllAg.mESC_derived_neural_cells mm9 No description Pluripotent stem cell mESC derived neural... cells SRX440736,SRX440731 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.10.AllAg.mESC_derived_neural_cells.bed ...
File list: NoD.PSC.05.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.05.AllAg.mESC_derived_neural_cells mm9 No description Pluripotent stem cell mESC derived neural... cells SRX440731,SRX440736 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.05.AllAg.mESC_derived_neural_cells.bed ...

File list: NoD.PSC.20.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available NoD.PSC.20.AllAg.mESC_derived_neural_cells mm9 No description Pluripotent stem cell mESC derived neural... cells SRX440731,SRX440736 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/NoD.PSC.20.AllAg.mESC_derived_neural_cells.bed ...
File list: His.PSC.20.H3K9ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.20.H3K9ac.AllCell mm9 Histone H3K9ac Pluripotent stem cell SRX185844,SRX185...848,SRX873351,SRX873349,SRX873345,SRX097641,SRX130021,SRX873347,SRX187620 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/His.PSC.20.H3K9ac.AllCell.bed ...
Enriching the Catalog

Science.gov (United States)

Tennant, Roy

2004-01-01

After decades of costly and time-consuming effort, nearly all libraries have completed the retrospective conversion of their card catalogs to electronic form. However, bibliographic systems still are really not much more than card catalogs on wheels. Enriched content that Amazon.com takes for granted--such as digitized tables of contents, cover…
Open Access Metadata, Catalogers, and Vendors: The Future of Cataloging Records

Science.gov (United States)

Flynn, Emily Alinder

2013-01-01

The open access (OA) movement is working to transform scholarly communication around the world, but this philosophy can also apply to metadata and cataloging records. While some notable, large academic libraries, such as Harvard University, the University of Michigan, and the University of Cambridge, released their cataloging records under OA…
File list: InP.PSC.50.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.50.AllAg.mESC_derived_pancreatic_cells mm9 Input control Pluripotent stem cell mESC derived panc...reatic cells SRX146010,SRX146009 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.50.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: InP.PSC.20.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.20.AllAg.mESC_derived_pancreatic_cells mm9 Input control Pluripotent stem cell mESC derived panc...reatic cells SRX146010,SRX146009 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.20.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: InP.PSC.10.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.10.AllAg.mESC_derived_pancreatic_cells mm9 Input control Pluripotent stem cell mESC derived panc...reatic cells SRX146010,SRX146009 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.10.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: InP.PSC.05.AllAg.mESC_derived_pancreatic_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.05.AllAg.mESC_derived_pancreatic_cells mm9 Input control Pluripotent stem cell mESC derived panc...reatic cells SRX146010,SRX146009 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.05.AllAg.mESC_derived_pancreatic_cells.bed ...
File list: InP.PSC.05.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.05.AllAg.hESC_derived_neural_crests hg19 Input control Pluripotent stem cell hESC derived neural... crests SRX1091573,SRX059369,SRX059361 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.PSC.05.AllAg.hESC_derived_neural_crests.bed ...
File list: InP.PSC.50.AllAg.hESC_derived_neural_crests [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.50.AllAg.hESC_derived_neural_crests hg19 Input control Pluripotent stem cell hESC derived neural... crests SRX1091573,SRX059369,SRX059361 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.PSC.50.AllAg.hESC_derived_neural_crests.bed ...
File list: InP.PSC.05.AllAg.hESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.05.AllAg.hESC_derived_neural_cells hg19 Input control Pluripotent stem cell hESC derived neural...RX698183,SRX729711,SRX729701 http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/InP.PSC.05.AllAg.hESC_derived_neural_cells.bed ...
Human iPSC-derived cardiomyocytes and tissue engineering strategies for disease modeling and drug screening.

Science.gov (United States)

Smith, Alec S T; Macadangdang, Jesse; Leung, Winnie; Laflamme, Michael A; Kim, Deok-Ho

Improved methodologies for modeling cardiac disease phenotypes and accurately screening the efficacy and toxicity of potential therapeutic compounds are actively being sought to advance drug development and improve disease modeling capabilities. To that end, much recent effort has been devoted to the development of novel engineered biomimetic cardiac tissue platforms that accurately recapitulate the structure and function of the human myocardium. Within the field of cardiac engineering, induced pluripotent stem cells (iPSCs) are an exciting tool that offer the potential to advance the current state of the art, as they are derived from somatic cells, enabling the development of personalized medical strategies and patient specific disease models. Here we review different aspects of iPSC-based cardiac engineering technologies. We highlight methods for producing iPSC-derived cardiomyocytes (iPSC-CMs) and discuss their application to compound efficacy/toxicity screening and in vitro modeling of prevalent cardiac diseases. Special attention is paid to the application of micro- and nano-engineering techniques for the development of novel iPSC-CM based platforms and their potential to advance current preclinical screening modalities. Published by Elsevier Inc.
XML for catalogers and metadata librarians

CERN Document Server

Cole, Timothy W

2013-01-01

How are today's librarians to manage and describe the everexpanding volumes of resources, in both digital and print formats? The use of XML in cataloging and metadata workflows can improve metadata quality, the consistency of cataloging workflows, and adherence to standards. This book is intended to enable current and future catalogers and metadata librarians to progress beyond a bare surfacelevel acquaintance with XML, thereby enabling them to integrate XML technologies more fully into their cataloging workflows. Building on the wealth of work on library descriptive practices, cataloging, and metadata, XML for Catalogers and Metadata Librarians explores the use of XML to serialize, process, share, and manage library catalog and metadata records. The authors' expert treatment of the topic is written to be accessible to those with little or no prior practical knowledge of or experience with how XML is used. Readers will gain an educated appreciation of the nuances of XML and grasp the benefit of more advanced ...
The Chandra Source Catalog 2.0: Combining Data for Processing (or How I learned 17 different words for "group")

Science.gov (United States)

Hain, Roger; Allen, Christopher E.; Anderson, Craig S.; Budynkiewicz, Jamie A.; Burke, Douglas; Chen, Judy C.; Civano, Francesca Maria; D'Abrusco, Raffaele; Doe, Stephen M.; Evans, Ian N.; Evans, Janet D.; Fabbiano, Giuseppina; Gibbs, Danny G., II; Glotfelty, Kenny J.; Graessle, Dale E.; Grier, John D.; Hall, Diane M.; Harbo, Peter N.; Houck, John C.; Lauer, Jennifer L.; Laurino, Omar; Lee, Nicholas P.; Martínez-Galarza, Juan Rafael; McCollough, Michael L.; McDowell, Jonathan C.; Miller, Joseph; McLaughlin, Warren; Morgan, Douglas L.; Mossman, Amy E.; Nguyen, Dan T.; Nichols, Joy S.; Nowak, Michael A.; Paxson, Charles; Plummer, David A.; Primini, Francis Anthony; Rots, Arnold H.; Siemiginowska, Aneta; Sundheim, Beth A.; Tibbetts, Michael; Van Stone, David W.; Zografou, Panagoula

2018-01-01

The Second Chandra Source Catalog (CSC2.0) combines data at multiple stages to improve detection efficiency, enhance source region identification, and match observations of the same celestial source taken with significantly different point spread functions on Chandra's detectors. The need to group data for different reasons at different times in processing results in a hierarchy of groups to which individual sources belong. Source data are initially identified as belonging to each Chandra observation ID and number (an "obsid"). Data from each obsid whose pointings are within sixty arcseconds of each other are reprojected to the same aspect reference coordinates and grouped into stacks. Detection is performed on all data in the same stack, and individual sources are identified. Finer source position and region data are determined by further processing sources whose photons may be commingled together, grouping such sources into bundles. Individual stacks which overlap to any extent are grouped into ensembles, and all stacks in the same ensemble are later processed together to identify master sources and determine their properties.We discuss the basis for the various methods of combining data for processing and precisely define how the groups are determined. We also investigate some of the issues related to grouping data and discuss what options exist and how groups have evolved from prior releases.This work has been supported by NASA under contract NAS 8-03060 to the Smithsonian Astrophysical Observatory for operation of the Chandra X-ray Center.
Effects of Co-Culture Media on Hepatic Differentiation of hiPSC with or without HUVEC Co-Culture.

Science.gov (United States)

Freyer, Nora; Greuel, Selina; Knöspel, Fanny; Strahl, Nadja; Amini, Leila; Jacobs, Frank; Monshouwer, Mario; Zeilinger, Katrin

2017-08-07

The derivation of hepatocytes from human induced pluripotent stem cells (hiPSC) is of great interest for applications in pharmacological research. However, full maturation of hiPSC-derived hepatocytes has not yet been achieved in vitro. To improve hepatic differentiation, co-cultivation of hiPSC with human umbilical vein endothelial cells (HUVEC) during hepatic differentiation was investigated in this study. In the first step, different culture media variations based on hepatocyte culture medium (HCM) were tested in HUVEC mono-cultures to establish a suitable culture medium for co-culture experiments. Based on the results, two media variants were selected to differentiate hiPSC-derived definitive endodermal (DE) cells into mature hepatocytes with or without HUVEC addition. DE cells differentiated in mono-cultures in the presence of those media variants showed a significant increase ( p < 0.05) in secretion of α-fetoprotein and in activities of cytochrome P450 (CYP) isoenzymes CYP2B6 and CYP3A4 as compared with cells differentiated in unmodified HCM used as control. Co-cultivation with HUVEC did not further improve the differentiation outcome. Thus, it can be concluded that the effect of the used medium outweighed the effect of HUVEC co-culture, emphasizing the importance of the culture medium composition for hiPSC differentiation.
File list: His.PSC.10.H3K27ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.10.H3K27ac.AllCell hg19 Histone H3K27ac Pluripotent stem cell SRX693093,SRX...jp/kyushu-u/hg19/assembled/His.PSC.10.H3K27ac.AllCell.bed ... ...X059363,SRX027485,SRX833405,SRX702014,SRX729674,SRX702010,SRX702013,SRX702007,SRX381312,SRX825312 http://dbarchive.biosciencedbc.
File list: His.PSC.05.H3K27ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.05.H3K27ac.AllCell hg19 Histone H3K27ac Pluripotent stem cell SRX693093,SRX...jp/kyushu-u/hg19/assembled/His.PSC.05.H3K27ac.AllCell.bed ... ...702006,SRX702010,SRX1091515,SRX059363,SRX825318,SRX381318,SRX381312,SRX702015,SRX702014,SRX825312 http://dbarchive.biosciencedbc.
An Automated Platform for Assessment of Congenital and Drug-Induced Arrhythmia with hiPSC-Derived Cardiomyocytes

Directory of Open Access Journals (Sweden)

Wesley L. McKeithan

2017-10-01

Full Text Available The ability to produce unlimited numbers of human induced pluripotent stem cell derived cardiomyocytes (hiPSC-CMs harboring disease and patient-specific gene variants creates a new paradigm for modeling congenital heart diseases (CHDs and predicting proarrhythmic liabilities of drug candidates. However, a major roadblock to implementing hiPSC-CM technology in drug discovery is that conventional methods for monitoring action potential (AP kinetics and arrhythmia phenotypes in vitro have been too costly or technically challenging to execute in high throughput. Herein, we describe the first large-scale, fully automated and statistically robust analysis of AP kinetics and drug-induced proarrhythmia in hiPSC-CMs. The platform combines the optical recording of a small molecule fluorescent voltage sensing probe (VoltageFluor2.1.Cl, an automated high throughput microscope and automated image analysis to rapidly generate physiological measurements of cardiomyocytes (CMs. The technique can be readily adapted on any high content imager to study hiPSC-CM physiology and predict the proarrhythmic effects of drug candidates.
A syntactical comparison between pair sentential calculus PSC and Gupta's definitional calculus Cn

OpenAIRE

石井,忠夫

2016-01-01

In this paper we will compare two logical systems PSC and Cn with a syntactical point of view. Because both notions of the pair-sentence with stage number in PSC and Gupta's sentence-definition with revision stage number in Cn are very similar, and both can deal with paradoxical sentences like a simple Liar sentence. His system was defined as a predicate calculus, but here we will introduce the propositional version of Cn for the comparison, and we had the following results: (1) C0 is a sublo...
Probabilistic Seismic Hazard Assessment for Himalayan-Tibetan Region from Historical and Instrumental Earthquake Catalogs

Science.gov (United States)

Rahman, M. Moklesur; Bai, Ling; Khan, Nangyal Ghani; Li, Guohui

2018-02-01

The Himalayan-Tibetan region has a long history of devastating earthquakes with wide-spread casualties and socio-economic damages. Here, we conduct the probabilistic seismic hazard analysis by incorporating the incomplete historical earthquake records along with the instrumental earthquake catalogs for the Himalayan-Tibetan region. Historical earthquake records back to more than 1000 years ago and an updated, homogenized and declustered instrumental earthquake catalog since 1906 are utilized. The essential seismicity parameters, namely, the mean seismicity rate γ, the Gutenberg-Richter b value, and the maximum expected magnitude M max are estimated using the maximum likelihood algorithm assuming the incompleteness of the catalog. To compute the hazard value, three seismogenic source models (smoothed gridded, linear, and areal sources) and two sets of ground motion prediction equations are combined by means of a logic tree on accounting the epistemic uncertainties. The peak ground acceleration (PGA) and spectral acceleration (SA) at 0.2 and 1.0 s are predicted for 2 and 10% probabilities of exceedance over 50 years assuming bedrock condition. The resulting PGA and SA maps show a significant spatio-temporal variation in the hazard values. In general, hazard value is found to be much higher than the previous studies for regions, where great earthquakes have actually occurred. The use of the historical and instrumental earthquake catalogs in combination of multiple seismogenic source models provides better seismic hazard constraints for the Himalayan-Tibetan region.

Comparative effects of Potash Sodium Chloride (PSC) mixture and ...

African Journals Online (AJOL)

Honey (Mellifica sp) is produced by Apis mellifera africana, widely consumed without prescription or restriction, and has been shown to possess wound healing and antitusive properties. Comparative study of the effects of honey paste and Potash Sodium Chloride (PSC) mixture on the healing of incisional wound on albino ...
File list: InP.PSC.20.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

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File list: InP.PSC.50.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.50.AllAg.mESC_derived_neural_cells mm9 Input control Pluripotent stem cell mESC derived neural...65,SRX1214070,SRX810564,SRX101693,SRX604259,SRX018672,SRX276677 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.50.AllAg.mESC_derived_neural_cells.bed ...
File list: InP.PSC.05.AllAg.mESC_derived_neural_cells [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available InP.PSC.05.AllAg.mESC_derived_neural_cells mm9 Input control Pluripotent stem cell mESC derived neural...4,SRX1214071,SRX1214070,SRX518051,SRX810565,SRX810564,SRX604259 http://dbarchive.biosciencedbc.jp/kyushu-u/mm9/assembled/InP.PSC.05.AllAg.mESC_derived_neural_cells.bed ...
A LIMIT ON THE NUMBER OF ISOLATED NEUTRON STARS DETECTED IN THE ROSAT ALL-SKY-SURVEY BRIGHT SOURCE CATALOG

International Nuclear Information System (INIS)

Turner, Monica L.; Rutledge, Robert E.; Letcavage, Ryan; Shevchuk, Andrew S. H.; Fox, Derek B.

2010-01-01

Using new and archival observations made with the Swift satellite and other facilities, we examine 147 X-ray sources selected from the ROSAT All-Sky-Survey Bright Source Catalog (RASS/BSC) to produce a new limit on the number of isolated neutron stars (INSs) in the RASS/BSC, the most constraining such limit to date. Independent of X-ray spectrum and variability, the number of INSs is ≤48 (90% confidence). Restricting attention to soft (kT eff < 200 eV), non-variable X-ray sources-as in a previous study-yields an all-sky limit of ≤31 INSs. In the course of our analysis, we identify five new high-quality INS candidates for targeted follow-up observations. A future all-sky X-ray survey with eROSITA, or another mission with similar capabilities, can be expected to increase the detected population of X-ray-discovered INSs from the 8-50 in the BSC, to (for a disk population) 240-1500, which will enable a more detailed study of neutron star population models.
Catalog Use Studies--Since the Introduction of Online Interactive Catalogs: Impact on Design for Subject Access.

Science.gov (United States)

Cochrane, Pauline A.; Markey, Karen

1983-01-01

This review of the transition from library card catalogs to online public access catalogs (OPAC) (1981-1982) discusses methods employed by online catalog use studies (self-administered questionnaires, OPAC transaction logs, focused-group interviews, feature analysis, online search and retrieval experiments) and new directions for OPAC research…
Comparative study on reversal efficacy of SDZ PSC 833, cyclosporin a and verapamil on multidrug resistance in vitro and in vivo

International Nuclear Information System (INIS)

Watanabe, Toru; Tsuge, Harumi; Oh-Hara, Tomoko; Naito, Mikihiko; Tsuruo, Takashi

1995-01-01

A non-immunosuppressive cyclosporin, SDZ PSC 833 (PSC833), shows a reversal effect on multidrug resistance (MDR) by functional modulation of MDR1 gene product, P-glycoprotein. The objective of the present study was to compare the reversal efficacy of three multidrug resistance modulators, PSC833, cyclosporin A (CsA) and verapamil (Vp). PSC833 has approximately 3-10-fold greater potency than CsA and Vp with respect to the restoring effect on reduced accumulation of doxorubicin (ADM) and vincristine (VCR) in ADM-resistant K562 myelogenous leukemia cells (K562/ADM) in vitro and also on the sensitivity of K562/ADM to ADM and VCR in in vitro growth inhibition. The in vivo efficacy of a combination of modifiers (PSC833 and CsA: 50 mg/kg, Vp 100 mg/kg administered p.o. 4 h before the administration of anticancer drugs) with anticancer drugs (ADM 2.5 mg/kg i.p., Q4D days 1, 5 and 9, VCR 0.05 mg/kg i.p., QD days 1-5) was tested in ADM-resistant P388-bearing mice. PSC833 significantly enhanced the increase in life span by more than 80%, whereas CsA and Vp enhanced by less than 50%. This reversal potency, which exceeded that of CsA and Vp, was confirmed by therapeutic experiments using colon adenocarcinoma 26-bearing mice. These results demonstrated that PSC833 has significant potency to reverse MDR in vitro and in vivo, suggesting that PSC833 is a good candidate for reversing multidrug resistance in clinical situations. (orig.)
Interactive Editing and Cataloging Interfaces for Modern Digital Library Systems

CERN Document Server

Raae, L C; Helstrup, H

2009-01-01

The next-generation High Energy Physics information system, INSPIRE, is being built by combining the content from the successful SPIRES database of bibliographic information with the CDS Invenio software being developed at CERN, an open-source platform for large digital library systems. The project is a collaboration between four major particle physics laboratories in Europe and the U.S. New tools are being developed to enable the global cooperation between catalogers at these labs. The BibEdit module will provide a central interface for the editing, enrichment, correction and verification of a record on its way into the system, by processing and presenting data from several supporting modules to the cataloger. The objective is to minimize the time and actions needed by the cataloger to process the record. To create a fast and powerful web application we make use of modern AJAX technology to create a dynamic and responsive user interface, where server communication happens in the background without delaying t...
The Modeling and Simulation Catalog for Discovery, Knowledge and Reuse

Science.gov (United States)

Stone, George F. III; Greenberg, Brandi; Daehler-Wilking, Richard; Hunt, Steven

2011-01-01

The DoD M&S Steering Committee has noted that the current DoD and Service's modeling and simulation resource repository (MSRR) services are not up-to-date limiting their value to the using communities. However, M&S leaders and managers also determined that the Department needs a functional M&S registry card catalog to facilitate M&S tool and data visibility to support M&S activities across the DoD. The M&S Catalog will discover and access M&S metadata maintained at nodes distributed across DoD networks in a centrally managed, decentralized process that employs metadata collection and management. The intent is to link information stores, precluding redundant location updating. The M&S Catalog uses a standard metadata schemas based on the DoD's Net-Centric Data Strategy Community of Interest metadata specification. The Air Force, Navy and OSD (CAPE) have provided initial information to participating DoD nodes, but plans on the horizon are being made to bring in hundreds of source providers.
Designing User Manuals for the Online Public Access Catalog.

Science.gov (United States)

Seiden, Peggy; Sullivan, Patricia

1986-01-01

Describes the process of developing and revising a brochure to guide library patrons in conducting an author search on an online public access catalog in order to demonstrate the application of four steps in production of a functional document--analysis; planning; development; evaluation, testing, and revision. Three sources are given. (EJS)
MC and A instrumentation catalog

Energy Technology Data Exchange (ETDEWEB)

Neymotin, L. [ed.] [Brookhaven National Lab., Upton, NY (United States); Sviridova, V. [ed.] [All-Russian Research Inst. of Automatics, Moscow (Russian Federation)

1998-06-01

In 1981 and 1985, two editions of a catalog of non-destructive nuclear measurement instrumentation, and material control and surveillance equipment, were published by Brookhaven National Laboratory (BNL). The last edition of the catalog included one hundred and twenty-five entries covering a wide range of devices developed in the US and abroad. More than ten years have elapsed since the publication of the more recent Catalog. Devices described in it have undergone significant modifications, and new devices have been developed. Therefore, in order to assist specialists in the field of Material Control and Accounting (MC and A), a new catalog has been created. Work on this instrumentation catalog started in 1997 as a cooperative effort of Brookhaven National Laboratory (BNL), operated by Brookhaven Science Associates under contract to the US Department of Energy, and the All-Russian Research Institute of Automatics (VNIIA), subordinate institute of the Atomic Energy Ministry of the Russian Federation, within the collaborative US-Russia Material Protection, Control, and Accounting (MPC and A) Program. Most of the equipment included in the Catalog are non-destructive assay (NDA) measurement devices employed for purposes of accounting, confirmation, and verification of nuclear materials. Other devices also included in the Catalog are employed in the detection and deterrence of unauthorized access to or removal of nuclear materials (material control: containment and surveillance). Equipment found in the Catalog comprises either: (1) complete devices or systems that can be used for MC and A applications; or (2) parts or components of complete systems, such as multi-channel analyzers, detectors, neutron generators, and software. All devices are categorized by their status of development--from prototype to serial production.
MC and A instrumentation catalog

International Nuclear Information System (INIS)

Neymotin, L.; Sviridova, V.

1998-01-01

In 1981 and 1985, two editions of a catalog of non-destructive nuclear measurement instrumentation, and material control and surveillance equipment, were published by Brookhaven National Laboratory (BNL). The last edition of the catalog included one hundred and twenty-five entries covering a wide range of devices developed in the US and abroad. More than ten years have elapsed since the publication of the more recent Catalog. Devices described in it have undergone significant modifications, and new devices have been developed. Therefore, in order to assist specialists in the field of Material Control and Accounting (MC and A), a new catalog has been created. Work on this instrumentation catalog started in 1997 as a cooperative effort of Brookhaven National Laboratory (BNL), operated by Brookhaven Science Associates under contract to the US Department of Energy, and the All-Russian Research Institute of Automatics (VNIIA), subordinate institute of the Atomic Energy Ministry of the Russian Federation, within the collaborative US-Russia Material Protection, Control, and Accounting (MPC and A) Program. Most of the equipment included in the Catalog are non-destructive assay (NDA) measurement devices employed for purposes of accounting, confirmation, and verification of nuclear materials. Other devices also included in the Catalog are employed in the detection and deterrence of unauthorized access to or removal of nuclear materials (material control: containment and surveillance). Equipment found in the Catalog comprises either: (1) complete devices or systems that can be used for MC and A applications; or (2) parts or components of complete systems, such as multi-channel analyzers, detectors, neutron generators, and software. All devices are categorized by their status of development--from prototype to serial production
Generation of Tumor Antigen-Specific iPSC-Derived Thymic Emigrants Using a 3D Thymic Culture System

Directory of Open Access Journals (Sweden)

Raul Vizcardo

2018-03-01

Full Text Available Summary: Induced pluripotent stem cell (iPSC-derived T cells may provide future therapies for cancer patients, but those generated by current methods, such as the OP9/DLL1 system, have shown abnormalities that pose major barriers for clinical translation. Our data indicate that these iPSC-derived CD8 single-positive T cells are more like CD4+CD8+ double-positive T cells than mature naive T cells because they display phenotypic markers of developmental arrest and an innate-like phenotype after stimulation. We developed a 3D thymic culture system to avoid these aberrant developmental fates, generating a homogeneous subset of CD8αβ+ antigen-specific T cells, designated iPSC-derived thymic emigrants (iTEs. iTEs exhibit phenotypic and functional similarities to naive T cells both in vitro and in vivo, including the capacity for expansion, memory formation, and tumor suppression. These data illustrate the limitations of current methods and provide a tool to develop the next generation of iPSC-based antigen-specific immunotherapies. : A barrier for clinical application of iPSC-derived CD8 T cells using OP9/DLL1 is their abnormal biology. Vizcardo et al. show that a 3D thymic culture system enables the generation of a homogeneous antigen-specific T cell subset, named iTEs, which closely mimics naive T cells and exhibits potent anti-tumor activity. Keywords: thymopoiesis, T cell differentiation, iPSC differentiation, adoptive cell transfer, naïve T cell, recent rhymic emigrants, fetal thymus organ culture, immunotherapy, 3D culture, tumor antigen specific T cell
Short-term study of the uptake of PrPSc by the Peyer’s patches in hamsters after oral exposure to scrapie

DEFF Research Database (Denmark)

Bergström, Ann-Louise; Jensen, Tim Kåre; Heegaard, Peter M. H.

2006-01-01

The disease-associated prion protein (PrPSc) has been detected in the ileal Peyer's patches of lambs as early as one week after oral exposure to scrapie. In hamsters, the earliest reported time of PrPSc detection in the Peyer's patches after oral exposure to scrapie is 69 days post-infection. To ......The disease-associated prion protein (PrPSc) has been detected in the ileal Peyer's patches of lambs as early as one week after oral exposure to scrapie. In hamsters, the earliest reported time of PrPSc detection in the Peyer's patches after oral exposure to scrapie is 69 days post...
Building OLAP Catalog

Directory of Open Access Journals (Sweden)

Mihaela MUNTEAN

2006-01-01

Full Text Available The Oracle OLAP option of Oracle Database 10g Enterprise Edition provides advanced analytic features to help us to summarize, analyze and calculate data faster than standard SQL. In this article I discussed about the CWM2, a set of PL/SQL packages which are using to create the OLAP Catalog metadata for an analytic workspace. BI Beans applications query OLAP Catalog metadata.
The Seamount Catalog in EarthRef.org

Science.gov (United States)

Gotberg, N. K.; Koppers, A. A.; Staudigel, H.; Perez, J.

2004-12-01

Seamounts are important to research and education in many scientific fields, providing a wide range of data on physical, chemical, biological and geological processes. In order to make a diverse set of seamount data accessible we have developed the Seamount Catalog in EarthRef.org, available through the http://earthref.org/databases/SC/. The primary goal of the Seamount Catalog is to provide access to digital data files on a large assortment of interdisciplinary seamount research. The catalog can be searched at a variety of ability or expert levels allowing it to be used from basic education to advanced research. Each seamount is described in terms of its location, height, volume, elongation, azimuth, irregularity, rifts, morphological classification and relation to other features. GEBCO (General Bathymetric Chart of the Ocean) gazetteer data (2002; 2003) is included in the database in order to provide information on the history, discovery and names of the seamounts. Screen-optimized bathymetry maps, grid files and the original multibeam data files are available for online viewing with higher resolution downloadable versions (AI, PS, PDF) also offered. The data files for each seamount include a map made from the multibeam data only, a map made from Smith and Sandwell's (1996) predicted bathymetry, a merged map incorporating both data sets, and a map showing the differences between the two data sets. We are working towards expanding the Seamount Catalog by integrating bathymetry data from various sources, developing and linking disciplinary reference models, and integrating information from multiple disciplines and from the literature. We hope to create a data integrative environment that provides access to seamount data and the tools needed for working with that data.
A PUBLIC, K-SELECTED, OPTICAL-TO-NEAR-INFRARED CATALOG OF THE EXTENDED CHANDRA DEEP FIELD SOUTH (ECDFS) FROM THE MULTIWAVELENGTH SURVEY BY YALE-CHILE (MUSYC)

International Nuclear Information System (INIS)

Taylor, Edward N.; Franx, Marijn; Quadri, Ryan F.; Damen, Maaike; Hildebrandt, Hendrik; Van Dokkum, Pieter G.; Herrera, David; Gawiser, Eric; Bell, Eric F.; Barrientos, L. Felipe; Blanc, Guillermo A.; Castander, Francisco J.; Gonzalez-Perez, Violeta; Hall, Patrick B.; Kriek, Mariska; Labbe, Ivo; Lira, Paulina; Maza, Jose; Rudnick, Gregory; Treister, Ezequiel

2009-01-01

We present a new, K-selected, optical-to-near infrared photometric catalog of the Extended Chandra Deep Field South (ECDFS), making it publicly available to the astronomical community. 22 Imaging and spectroscopy data and catalogs are freely available through the MUSYC Public Data Release webpage: http://www.astro.yale.edu/MUSYC/. The data set is founded on publicly available imaging, supplemented by original z'JK imaging data collected as part of the MUltiwavelength Survey by Yale-Chile (MUSYC). The final photometric catalog consists of photometry derived from UU 38 BVRIz'JK imaging covering the full 1/2 x 1/2 square circ of the ECDFS, plus H-band photometry for approximately 80% of the field. The 5σ flux limit for point sources is K (AB) tot = 22.0. This is also the nominal completeness and reliability limit of the catalog: the empirical completeness for 21.75 85%. We have verified the quality of the catalog through both internal consistency checks, and comparisons to other existing and publicly available catalogs. As well as the photometric catalog, we also present catalogs of photometric redshifts and rest-frame photometry derived from the 10-band photometry. We have collected robust spectroscopic redshift determinations from published sources for 1966 galaxies in the catalog. Based on these sources, we have achieved a (1σ) photometric redshift accuracy of Δz/(1 + z) = 0.036, with an outlier fraction of 7.8%. Most of these outliers are X-ray sources. Finally, we describe and release a utility for interpolating rest-frame photometry from observed spectral energy distributions, dubbed InterRest. 23 InterRest is available via http://www.strw.leidenuniv.nl/~ent/InterRest. Documentation and a complete walkthrough can be found at the same address.
Modern representation of databases on the example of the Catalog of Solar Proton Events in the 23rd Cycle of Solar Activity

Science.gov (United States)

Ishkov, V. N.; Zabarinskaya, L. P.; Sergeeva, N. A.

2017-11-01

The development of studies of solar sources and their effects on the state of the near-Earth space required systematization of the corresponding information in the form of databases and catalogs for the entire time of observation of any geoeffective phenomenon that includes, if possible at the time of creation, all of the characteristics of the phenomena themselves and the sources of these phenomena on the Sun. A uniform presentation of information in the form of a series of similar catalogs that cover long time intervals is of particular importance. The large amount of information collected in such catalogs makes it necessary to use modern methods of its organization and presentation that allow a transition between individual parts of the catalog and a quick search for necessary events and their characteristics, which is implemented in the presented Catalog of Solar Proton Events in the 23rd Cycle of Solar Activity of the sequence of catalogs (six separate issues) that cover the period from 1970 to 2009 (20th-23rd solar cycles).
Evaluation of MYBPC3 trans-Splicing and Gene Replacement as Therapeutic Options in Human iPSC-Derived Cardiomyocytes

Directory of Open Access Journals (Sweden)

Maksymilian Prondzynski

2017-06-01

Full Text Available Gene therapy is a promising option for severe forms of genetic diseases. We previously provided evidence for the feasibility of trans-splicing, exon skipping, and gene replacement in a mouse model of hypertrophic cardiomyopathy (HCM carrying a mutation in MYBPC3, encoding cardiac myosin-binding protein C (cMyBP-C. Here we used human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs from an HCM patient carrying a heterozygous c.1358-1359insC MYBPC3 mutation and from a healthy donor. HCM hiPSC-CMs exhibited ∼50% lower MYBPC3 mRNA and cMyBP-C protein levels than control, no truncated cMyBP-C, larger cell size, and altered gene expression, thus reproducing human HCM features. We evaluated RNA trans-splicing and gene replacement after transducing hiPSC-CMs with adeno-associated virus. trans-splicing with 5′ or 3′ pre-trans-splicing molecules represented ∼1% of total MYBPC3 transcripts in healthy hiPSC-CMs. In contrast, gene replacement with the full-length MYBPC3 cDNA resulted in ∼2.5-fold higher MYBPC3 mRNA levels in HCM and control hiPSC-CMs. This restored the cMyBP-C level to 81% of the control level, suppressed hypertrophy, and partially restored gene expression to control level in HCM cells. This study provides evidence for (1 the feasibility of trans-splicing, although with low efficiency, and (2 efficient gene replacement in hiPSC-CMs with a MYBPC3 mutation.
File list: His.PSC.50.H3K9K14ac.AllCell [Chip-atlas[Archive

Lifescience Database Archive (English)

Full Text Available His.PSC.50.H3K9K14ac.AllCell hg19 Histone H3K9K14ac Pluripotent stem cell SRX037086... http://dbarchive.biosciencedbc.jp/kyushu-u/hg19/assembled/His.PSC.50.H3K9K14ac.AllCell.bed ...

Photometric Selection of a Massive Galaxy Catalog with z ≥ 0.55

Science.gov (United States)

Núñez, Carolina; Spergel, David N.; Ho, Shirley

2017-02-01

We present the development of a photometrically selected massive galaxy catalog, targeting Luminous Red Galaxies (LRGs) and massive blue galaxies at redshifts of z≥slant 0.55. Massive galaxy candidates are selected using infrared/optical color-color cuts, with optical data from the Sloan Digital Sky Survey (SDSS) and infrared data from “unWISE” forced photometry derived from the Wide-field Infrared Survey Explorer (WISE). The selection method is based on previously developed techniques to select LRGs with z> 0.5, and is optimized using receiver operating characteristic curves. The catalog contains 16,191,145 objects, selected over the full SDSS DR10 footprint. The redshift distribution of the resulting catalog is estimated using spectroscopic redshifts from the DEEP2 Galaxy Redshift Survey and photometric redshifts from COSMOS. Restframe U - B colors from DEEP2 are used to estimate LRG selection efficiency. Using DEEP2, the resulting catalog has an average redshift of z = 0.65, with a standard deviation of σ =2.0, and an average restframe of U-B=1.0, with a standard deviation of σ =0.27. Using COSMOS, the resulting catalog has an average redshift of z = 0.60, with a standard deviation of σ =1.8. We estimate 34 % of the catalog to be blue galaxies with z≥slant 0.55. An estimated 9.6 % of selected objects are blue sources with redshift z0.55. Stellar contamination is estimated to be 1.8%.
National Archives Catalog and API

Data.gov (United States)

National Archives and Records Administration — The National Archives Catalog is the online catalog of NARA's nationwide holdings in the Washington, DC area, Regional Archives, and Presidential Libraries.
The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog

Science.gov (United States)

Togninalli, Matteo; Seren, Ümit; Meng, Dazhe; Fitz, Joffrey; Nordborg, Magnus; Weigel, Detlef

2018-01-01

Abstract The abundance of high-quality genotype and phenotype data for the model organism Arabidopsis thaliana enables scientists to study the genetic architecture of many complex traits at an unprecedented level of detail using genome-wide association studies (GWAS). GWAS have been a great success in A. thaliana and many SNP-trait associations have been published. With the AraGWAS Catalog (https://aragwas.1001genomes.org) we provide a publicly available, manually curated and standardized GWAS catalog for all publicly available phenotypes from the central A. thaliana phenotype repository, AraPheno. All GWAS have been recomputed on the latest imputed genotype release of the 1001 Genomes Consortium using a standardized GWAS pipeline to ensure comparability between results. The catalog includes currently 167 phenotypes and more than 222 000 SNP-trait associations with P < 10−4, of which 3887 are significantly associated using permutation-based thresholds. The AraGWAS Catalog can be accessed via a modern web-interface and provides various features to easily access, download and visualize the results and summary statistics across GWAS. PMID:29059333
Global synchronization algorithms for the Intel iPSC/860

Science.gov (United States)

Seidel, Steven R.; Davis, Mark A.

1992-01-01

In a distributed memory multicomputer that has no global clock, global processor synchronization can only be achieved through software. Global synchronization algorithms are used in tridiagonal systems solvers, CFD codes, sequence comparison algorithms, and sorting algorithms. They are also useful for event simulation, debugging, and for solving mutual exclusion problems. For the Intel iPSC/860 in particular, global synchronization can be used to ensure the most effective use of the communication network for operations such as the shift, where each processor in a one-dimensional array or ring concurrently sends a message to its right (or left) neighbor. Three global synchronization algorithms are considered for the iPSC/860: the gysnc() primitive provided by Intel, the PICL primitive sync0(), and a new recursive doubling synchronization (RDS) algorithm. The performance of these algorithms is compared to the performance predicted by communication models of both the long and forced message protocols. Measurements of the cost of shift operations preceded by global synchronization show that the RDS algorithm always synchronizes the nodes more precisely and costs only slightly more than the other two algorithms.
Low Resting Membrane Potential and Low Inward Rectifier Potassium Currents Are Not Inherent Features of hiPSC-Derived Cardiomyocytes.

Science.gov (United States)

Horváth, András; Lemoine, Marc D; Löser, Alexandra; Mannhardt, Ingra; Flenner, Frederik; Uzun, Ahmet Umur; Neuber, Christiane; Breckwoldt, Kaja; Hansen, Arne; Girdauskas, Evaldas; Reichenspurner, Hermann; Willems, Stephan; Jost, Norbert; Wettwer, Erich; Eschenhagen, Thomas; Christ, Torsten

2018-03-13

Human induced pluripotent stem cell (hiPSC) cardiomyocytes (CMs) show less negative resting membrane potential (RMP), which is attributed to small inward rectifier currents (I K1 ). Here, I K1 was measured in hiPSC-CMs (proprietary and commercial cell line) cultured as monolayer (ML) or 3D engineered heart tissue (EHT) and, for direct comparison, in CMs from human right atrial (RA) and left ventricular (LV) tissue. RMP was measured in isolated cells and intact tissues. I K1 density in ML- and EHT-CMs from the proprietary line was similar to LV and RA, respectively. I K1 density in EHT-CMs from the commercial line was 2-fold smaller than in the proprietary line. RMP in EHT of both lines was similar to RA and LV. Repolarization fraction and I K,ACh response discriminated best between RA and LV and indicated predominantly ventricular phenotype in hiPSC-CMs/EHT. The data indicate that I K1 is not necessarily low in hiPSC-CMs, and technical issues may underlie low RMP in hiPSC-CMs. Copyright © 2018 The Author(s). Published by Elsevier Inc. All rights reserved.
THE EXTENDED VIRGO CLUSTER CATALOG

Energy Technology Data Exchange (ETDEWEB)

Kim, Suk; Rey, Soo-Chang; Lee, Youngdae; Chung, Jiwon; Pak, Mina; Yi, Wonhyeong; Lee, Woong [Department of Astronomy and Space Science, Chungnam National University, 99 Daehak-ro, Daejeon 305-764 (Korea, Republic of); Jerjen, Helmut [Research School of Astronomy and Astrophysics, The Australian National University, Cotter Road, Weston, ACT 2611 (Australia); Lisker, Thorsten [Astronomisches Rechen-Institut, Zentrum für Astronomie der Universität Heidelberg (ZAH), Mönchhofstraße 12-14, D-69120 Heidelberg (Germany); Sung, Eon-Chang [Korea Astronomy and Space Science institute, 776 Daedeokdae-ro, Daejeon 305-348 (Korea, Republic of)

2015-01-01

We present a new catalog of galaxies in the wider region of the Virgo cluster, based on the Sloan Digital Sky Survey (SDSS) Data Release 7. The Extended Virgo Cluster Catalog (EVCC) covers an area of 725 deg{sup 2} or 60.1 Mpc{sup 2}. It is 5.2 times larger than the footprint of the classical Virgo Cluster Catalog (VCC) and reaches out to 3.5 times the virial radius of the Virgo cluster. We selected 1324 spectroscopically targeted galaxies with radial velocities less than 3000 km s{sup –1}. In addition, 265 galaxies that have been overlooked in the SDSS spectroscopic survey but have available redshifts in the NASA Extragalactic Database are also included. Our selection process secured a total of 1589 galaxies, 676 of which are not included in the VCC. The certain and possible cluster members are defined by means of redshift comparison with a cluster infall model. We employed two independent and complementary galaxy classification schemes: the traditional morphological classification based on the visual inspection of optical images and a characterization of galaxies from their spectroscopic features. SDSS u, g, r, i, and z passband photometry of all EVCC galaxies was performed using Source Extractor. We compare the EVCC galaxies with the VCC in terms of morphology, spatial distribution, and luminosity function. The EVCC defines a comprehensive galaxy sample covering a wider range in galaxy density that is significantly different from the inner region of the Virgo cluster. It will be the foundation for forthcoming galaxy evolution studies in the extended Virgo cluster region, complementing ongoing and planned Virgo cluster surveys at various wavelengths.
A Highly Available Grid Metadata Catalog

DEFF Research Database (Denmark)

Jensen, Henrik Thostrup; Kleist, Joshva

2009-01-01

for the system to function. The data model used in the catalog is RDF, which allows users to create theirown name spaces and schemas. Querying is performed using SPARQL. Additionally the catalog can be used as a synchronization mechanism, by utilizing a compare and swap operation. The catalog is accessed using...
The Gaia hybrid catalog: a leverage to find Galactic structures

Science.gov (United States)

Fouesneau, M.; Bailer-Jones, C. A. L.

2014-07-01

of the WISE filters, one can select the Oxygen-rich Asymptotic Giant Branch (AGBs) stars to find spatial substructures with particular interstellar medium properties. Breaking through the distance-extinction degeneracies will also help finding large scale structures in the disk such as streams or spiral arms, especially when combined with age or metallicity selections for instance. Second, we presented one aspect of the hybrid catalogs dedicated to support the analysis of star clusters. Star clusters are not only calibrators of stellar evolution models but also references to study star formation in general. We presented one future outcome of the hybrid catalogs, in which we provide for known star clusters, an assessment of stellar memberships based on a combination of phase-space, and colormagnitude distribution fitting. In this application, the assumption that a cluster is a "simple" population provides a significant advantage when deriving individual star properties. Eventually one can imagine this application can be extended to stellar streams. Hybrid catalogs are meant to be provided along with the Gaia data releases, and will offer a tremendous source of validation for the Gaia Data Processing.
HFF-DeepSpace Photometric Catalogs of the 12 Hubble Frontier Fields, Clusters, and Parallels: Photometry, Photometric Redshifts, and Stellar Masses

Science.gov (United States)

Shipley, Heath V.; Lange-Vagle, Daniel; Marchesini, Danilo; Brammer, Gabriel B.; Ferrarese, Laura; Stefanon, Mauro; Kado-Fong, Erin; Whitaker, Katherine E.; Oesch, Pascal A.; Feinstein, Adina D.; Labbé, Ivo; Lundgren, Britt; Martis, Nicholas; Muzzin, Adam; Nedkova, Kalina; Skelton, Rosalind; van der Wel, Arjen

2018-03-01

We present Hubble multi-wavelength photometric catalogs, including (up to) 17 filters with the Advanced Camera for Surveys and Wide Field Camera 3 from the ultra-violet to near-infrared for the Hubble Frontier Fields and associated parallels. We have constructed homogeneous photometric catalogs for all six clusters and their parallels. To further expand these data catalogs, we have added ultra-deep K S -band imaging at 2.2 μm from the Very Large Telescope HAWK-I and Keck-I MOSFIRE instruments. We also add post-cryogenic Spitzer imaging at 3.6 and 4.5 μm with the Infrared Array Camera (IRAC), as well as archival IRAC 5.8 and 8.0 μm imaging when available. We introduce the public release of the multi-wavelength (0.2–8 μm) photometric catalogs, and we describe the unique steps applied for the construction of these catalogs. Particular emphasis is given to the source detection band, the contamination of light from the bright cluster galaxies (bCGs), and intra-cluster light (ICL). In addition to the photometric catalogs, we provide catalogs of photometric redshifts and stellar population properties. Furthermore, this includes all the images used in the construction of the catalogs, including the combined models of bCGs and ICL, the residual images, segmentation maps, and more. These catalogs are a robust data set of the Hubble Frontier Fields and will be an important aid in designing future surveys, as well as planning follow-up programs with current and future observatories to answer key questions remaining about first light, reionization, the assembly of galaxies, and many more topics, most notably by identifying high-redshift sources to target.
VizieR Online Data Catalog: Gaia DR2 (Gaia Collaboration, 2018)

Science.gov (United States)

Gaia Collaboration

2018-04-01

Contents of Gaia DR2: The five-parameter astrometric solution - positions on the sky (alpha,delta), parallaxes, and proper motions - for more than 1.3 billion (109) sources, with a limiting magnitude of G=21 and a bright limit of G~=3. Parallax uncertainties are in the range of up to 0.04 milliarcsecond for sources at G2MASS PSC, SDSS DR9, Pan-STARRS1, GSC2.3, PPM-XL, AllWISE, and URAT-1 data on the other hand. Catalogue of radial velocity standard stars (Soubiran et al., 2018A&A..in.prep...): Individual and combined radial velocity measurements are presented for 4813 stars in rvstdcat.dat and rvstdmes.dat files. (20 data files).
SPLASH-SXDF Multi-wavelength Photometric Catalog

Science.gov (United States)

Mehta, Vihang; Scarlata, Claudia; Capak, Peter; Davidzon, Iary; Faisst, Andreas; Hsieh, Bau Ching; Ilbert, Olivier; Jarvis, Matt; Laigle, Clotilde; Phillips, John; Silverman, John; Strauss, Michael A.; Tanaka, Masayuki; Bowler, Rebecca; Coupon, Jean; Foucaud, Sébastien; Hemmati, Shoubaneh; Masters, Daniel; McCracken, Henry Joy; Mobasher, Bahram; Ouchi, Masami; Shibuya, Takatoshi; Wang, Wei-Hao

2018-04-01

We present a multi-wavelength catalog in the Subaru/XMM-Newton Deep Field (SXDF) as part of the Spitzer Large Area Survey with Hyper-Suprime-Cam (SPLASH). We include the newly acquired optical data from the Hyper-Suprime-Cam Subaru Strategic Program, accompanied by IRAC coverage from the SPLASH survey. All available optical and near-infrared data is homogenized and resampled on a common astrometric reference frame. Source detection is done using a multi-wavelength detection image including the u-band to recover the bluest objects. We measure multi-wavelength photometry and compute photometric redshifts as well as physical properties for ∼1.17 million objects over ∼4.2 deg2, with ∼800,000 objects in the 2.4 deg2 HSC-Ultra-Deep coverage. Using the available spectroscopic redshifts from various surveys over the range of 0 fraction of 3.2%. The SPLASH-SXDF catalog is a valuable, publicly available resource, perfectly suited for studying galaxies in the early universe and tracing their evolution through cosmic time.
Detection and Localization of PrPSc in the Skeletal Muscle of Patients with Variant, Iatrogenic, and Sporadic Forms of Creutzfeldt-Jakob Disease

Science.gov (United States)

Peden, Alexander H.; Ritchie, Diane L.; Head, Mark W.; Ironside, James W.

2006-01-01

Variant Creutzfeldt-Jakob disease (vCJD) differs from other human prion diseases in that the pathogenic prion protein PrPSc can be detected to a greater extent at extraneuronal sites throughout the body, principally within lymphoid tissues. However, a recent study using a high-sensitivity Western blotting technique revealed low levels of PrPSc in skeletal muscle from a quarter of Swiss patients with sporadic CJD (sCJD). This posed the question of whether PrPSc in muscle could also be detected in vCJD, sCJD, and iatrogenic (iCJD) patients from other populations. Therefore, we have used the same high-sensitivity Western blotting technique, in combination with paraffin-embedded tissue blotting, to screen for PrPSc in muscle tissue specimens taken at autopsy from 49 CJD patients in the United Kingdom. These techniques identified muscle PrPSc in 8 of 17 vCJD, 7 of 26 sCJD, and 2 of 5 iCJD patients. Paraffin-embedded tissue blotting analysis showed PrPSc in skeletal muscle in localized anatomical structures that had the morphological and immunohistochemical characteristics of nerve fibers. The detection of PrPSc in muscle tissue from all forms of CJD indicates the possible presence of infectivity in these tissues, suggesting important implications for assessing the potential risk of iatrogenic spread via contaminated surgical instruments. PMID:16507908
IfA Catalogs of Solar Data Products

Science.gov (United States)

Habbal, Shadia R.; Scholl, I.; Morgan, H.

2009-05-01

This paper presents a new set of online catalogs of solar data products. The IfA Catalogs of Solar Data Products were developed to enhance the scientific output of coronal images acquired from ground and space, starting with the SoHO era. Image processing tools have played a significant role in the production of these catalogs [Morgan et al. 2006, 2008, Scholl and Habbal 2008]. Two catalogs are currently available at http://alshamess.ifa.hawaii.edu/ : 1) Catalog of daily coronal images: One coronal image per day from EIT, MLSO and LASCO/C2 and C3 have been processed using the Normalizing Radial-Graded-Filter (NRGF) image processing tool. These images are available individually or as composite images. 2) Catalog of LASCO data: The whole LASCO dataset has been re-processed using the same method. The user can search files by dates and instruments, and images can be retrieved as JPEG or FITS files. An option to make on-line GIF movies from selected images is also available. In addition, the LASCO data set can be searched from existing CME catalogs (CDAW and Cactus). By browsing one of the two CME catalogs, the user can refine the query and access LASCO data covering the time frame of a CME. The catalogs will be continually updated as more data become publicly available.
MDS MIC Catalog Inputs

Science.gov (United States)

Johnson-Throop, Kathy A.; Vowell, C. W.; Smith, Byron; Darcy, Jeannette

2006-01-01

This viewgraph presentation reviews the inputs to the MDS Medical Information Communique (MIC) catalog. The purpose of the group is to provide input for updating the MDS MIC Catalog and to request that MMOP assign Action Item to other working groups and FSs to support the MITWG Process for developing MIC-DDs.
Second Line of Defense Master Spares Catalog

Energy Technology Data Exchange (ETDEWEB)

Henderson, Dale L.; Muller, George; Mercier, Theresa M.; Brigantic, Robert T.; Perkins, Casey J.; Cooley, Scott K.

2012-11-20

This catalog is intended to be a comprehensive listing of repair parts, components, kits, and consumable items used on the equipment deployed at SLD sites worldwide. The catalog covers detection, CAS, network, ancillary equipment, and tools. The catalog is backed by a Master Parts Database which is used to generate the standard report views of the catalog. The master parts database is a relational database containing a record for every part in the master parts catalog along with supporting tables for normalizing fields in the records. The database also includes supporting queries, database maintenance forms, and reports.
Murine iPSC-Derived Macrophages as a Tool for Disease Modeling of Hereditary Pulmonary Alveolar Proteinosis due to Csf2rb Deficiency

Directory of Open Access Journals (Sweden)

Adele Mucci

2016-08-01

Full Text Available Induced pluripotent stem cells (iPSCs represent an innovative source for the standardized in vitro generation of macrophages (Mφ. We here describe a robust and efficient protocol to obtain mature and functional Mφ from healthy as well as disease-specific murine iPSCs. With regard to morphology, surface phenotype, and function, our iPSC-derived Mφ (iPSC-Mφ closely resemble their counterparts generated in vitro from bone marrow cells. Moreover, when we investigated the feasibility of our differentiation system to serve as a model for rare congenital diseases associated with Mφ malfunction, we were able to faithfully recapitulate the pathognomonic defects in GM-CSF signaling and Mφ function present in hereditary pulmonary alveolar proteinosis (herPAP. Thus, our studies may help to overcome the limitations placed on research into certain rare disease entities by the lack of an adequate supply of disease-specific primary cells, and may aid the development of novel therapeutic approaches for herPAP patients.
The Online Catalog: Exceeding Our Grasp.

Science.gov (United States)

Lipow, Anne Grodzins

1989-01-01

Discusses two problems related to the use of online catalogs: (1) staff training has not kept pace with new catalogs, resulting in a lack of search expertise in staff and patrons; and (2) users expect instant access to materials found in the catalog. It is argued that these problems must be addressed to adequately serve library patrons. (CLB)
Recapitulation of Clinical Individual Susceptibility to Drug-Induced QT Prolongation in Healthy Subjects Using iPSC-Derived Cardiomyocytes

Directory of Open Access Journals (Sweden)

Tadahiro Shinozawa

2017-02-01

Full Text Available To predict drug-induced serious adverse events (SAE in clinical trials, a model using a panel of cells derived from human induced pluripotent stem cells (hiPSCs of individuals with different susceptibilities could facilitate major advancements in translational research in terms of safety and pharmaco-economics. However, it is unclear whether hiPSC-derived cells can recapitulate interindividual differences in drug-induced SAE susceptibility in populations not having genetic disorders such as healthy subjects. Here, we evaluated individual differences in SAE susceptibility based on an in vitro model using hiPSC-derived cardiomyocytes (hiPSC-CMs as a pilot study. hiPSCs were generated from blood samples of ten healthy volunteers with different susceptibilities to moxifloxacin (Mox-induced QT prolongation. Different Mox-induced field potential duration (FPD prolongation values were observed in the hiPSC-CMs from each individual. Interestingly, the QT interval was significantly positively correlated with FPD at clinically relevant concentrations (r > 0.66 in multiple analyses including concentration-QT analysis. Genomic analysis showed no interindividual significant differences in known target-binding sites for Mox and other drugs such as the hERG channel subunit, and baseline QT ranges were normal. The results suggest that hiPSC-CMs from healthy subjects recapitulate susceptibility to Mox-induced QT prolongation and provide proof of concept for in vitro preclinical trials.
Cataloging Expert Systems: Optimism and Frustrated Reality.

Science.gov (United States)

Olmstadt, William J.

2000-01-01

Discusses artificial intelligence and attempts to catalog expert systems. Topics include the nature of expertise; examples of cataloging expert systems; barriers to implementation; and problems, including total automation, cataloging expertise, priorities, and system design. (LRW)
The immature electrophysiological phenotype of iPSC-CMs still hampers in vitro drug screening: Special focus on IK1.

Science.gov (United States)

Goversen, Birgit; van der Heyden, Marcel A G; van Veen, Toon A B; de Boer, Teun P

2018-03-01

Preclinical drug screens are not based on human physiology, possibly complicating predictions on cardiotoxicity. Drug screening can be humanised with in vitro assays using human induced pluripotent stem cell-derived cardiomyocytes (iPSC-CMs). However, in contrast to adult ventricular cardiomyocytes, iPSC-CMs beat spontaneously due to presence of the pacemaking current I f and reduced densities of the hyperpolarising current I K1 . In adult cardiomyocytes, I K1 finalises repolarisation by stabilising the resting membrane potential while also maintaining excitability. The reduced I K1 density contributes to proarrhythmic traits in iPSC-CMs, which leads to an electrophysiological phenotype that might bias drug responses. The proarrhythmic traits can be suppressed by increasing I K1 in a balanced manner. We systematically evaluated all studies that report strategies to mature iPSC-CMs and found that only few studies report I K1 current densities. Furthermore, these studies did not succeed in establishing sufficient I K1 levels as they either added too little or too much I K1 . We conclude that reduced densities of I K1 remain a major flaw in iPSC-CMs, which hampers their use for in vitro drug screening. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

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