Optimization of magnet sorting in a storage ring using genetic algorithms
International Nuclear Information System (INIS)
Chen Jia; Wang Lin; Li Weimin; Gao Weiwei
2013-01-01
In this paper, the genetic algorithms are applied to the optimization problem of magnet sorting in an electron storage ring, according to which the objectives are set so that the closed orbit distortion and beta beating can be minimized and the dynamic aperture maximized. The sorting of dipole, quadrupole and sextupole magnets is optimized while the optimization results show the power of the application of genetic algorithms in magnet sorting. (authors)
Binar Sort: A Linear Generalized Sorting Algorithm
Gilreath, William F.
2008-01-01
Sorting is a common and ubiquitous activity for computers. It is not surprising that there exist a plethora of sorting algorithms. For all the sorting algorithms, it is an accepted performance limit that sorting algorithms are linearithmic or O(N lg N). The linearithmic lower bound in performance stems from the fact that the sorting algorithms use the ordering property of the data. The sorting algorithm uses comparison by the ordering property to arrange the data elements from an initial perm...
Akl, Selim G
1985-01-01
Parallel Sorting Algorithms explains how to use parallel algorithms to sort a sequence of items on a variety of parallel computers. The book reviews the sorting problem, the parallel models of computation, parallel algorithms, and the lower bounds on the parallel sorting problems. The text also presents twenty different algorithms, such as linear arrays, mesh-connected computers, cube-connected computers. Another example where algorithm can be applied is on the shared-memory SIMD (single instruction stream multiple data stream) computers in which the whole sequence to be sorted can fit in the
Solving multi-objective job shop scheduling problems using a non-dominated sorting genetic algorithm
Piroozfard, Hamed; Wong, Kuan Yew
2015-05-01
The efforts of finding optimal schedules for the job shop scheduling problems are highly important for many real-world industrial applications. In this paper, a multi-objective based job shop scheduling problem by simultaneously minimizing makespan and tardiness is taken into account. The problem is considered to be more complex due to the multiple business criteria that must be satisfied. To solve the problem more efficiently and to obtain a set of non-dominated solutions, a meta-heuristic based non-dominated sorting genetic algorithm is presented. In addition, task based representation is used for solution encoding, and tournament selection that is based on rank and crowding distance is applied for offspring selection. Swapping and insertion mutations are employed to increase diversity of population and to perform intensive search. To evaluate the modified non-dominated sorting genetic algorithm, a set of modified benchmarking job shop problems obtained from the OR-Library is used, and the results are considered based on the number of non-dominated solutions and quality of schedules obtained by the algorithm.
Denni Algorithm An Enhanced Of SMS (Scan, Move and Sort) Algorithm
Aprilsyah Lubis, Denni; Salim Sitompul, Opim; Marwan; Tulus; Andri Budiman, M.
2017-12-01
Sorting has been a profound area for the algorithmic researchers, and many resources are invested to suggest a more working sorting algorithm. For this purpose many existing sorting algorithms were observed in terms of the efficiency of the algorithmic complexity. Efficient sorting is important to optimize the use of other algorithms that require sorted lists to work correctly. Sorting has been considered as a fundamental problem in the study of algorithms that due to many reasons namely, the necessary to sort information is inherent in many applications, algorithms often use sorting as a key subroutine, in algorithm design there are many essential techniques represented in the body of sorting algorithms, and many engineering issues come to the fore when implementing sorting algorithms., Many algorithms are very well known for sorting the unordered lists, and one of the well-known algorithms that make the process of sorting to be more economical and efficient is SMS (Scan, Move and Sort) algorithm, an enhancement of Quicksort invented Rami Mansi in 2010. This paper presents a new sorting algorithm called Denni-algorithm. The Denni algorithm is considered as an enhancement on the SMS algorithm in average, and worst cases. The Denni algorithm is compared with the SMS algorithm and the results were promising.
International Nuclear Information System (INIS)
Dinev, D.
1996-01-01
Several new algorithms for sorting of dipole and/or quadrupole magnets in synchrotrons and storage rings are described. The algorithms make use of a combinatorial approach to the problem and belong to the class of random search algorithms. They use an appropriate metrization of the state space. The phase-space distortion (smear) is used as a goal function. Computational experiments for the case of the JINR-Dubna superconducting heavy ion synchrotron NUCLOTRON have shown a significant reduction of the phase-space distortion after the magnet sorting. (orig.)
An efficient non-dominated sorting method for evolutionary algorithms.
Fang, Hongbing; Wang, Qian; Tu, Yi-Cheng; Horstemeyer, Mark F
2008-01-01
We present a new non-dominated sorting algorithm to generate the non-dominated fronts in multi-objective optimization with evolutionary algorithms, particularly the NSGA-II. The non-dominated sorting algorithm used by NSGA-II has a time complexity of O(MN(2)) in generating non-dominated fronts in one generation (iteration) for a population size N and M objective functions. Since generating non-dominated fronts takes the majority of total computational time (excluding the cost of fitness evaluations) of NSGA-II, making this algorithm faster will significantly improve the overall efficiency of NSGA-II and other genetic algorithms using non-dominated sorting. The new non-dominated sorting algorithm proposed in this study reduces the number of redundant comparisons existing in the algorithm of NSGA-II by recording the dominance information among solutions from their first comparisons. By utilizing a new data structure called the dominance tree and the divide-and-conquer mechanism, the new algorithm is faster than NSGA-II for different numbers of objective functions. Although the number of solution comparisons by the proposed algorithm is close to that of NSGA-II when the number of objectives becomes large, the total computational time shows that the proposed algorithm still has better efficiency because of the adoption of the dominance tree structure and the divide-and-conquer mechanism.
A New Algorithm Using the Non-Dominated Tree to Improve Non-Dominated Sorting.
Gustavsson, Patrik; Syberfeldt, Anna
2018-01-01
Non-dominated sorting is a technique often used in evolutionary algorithms to determine the quality of solutions in a population. The most common algorithm is the Fast Non-dominated Sort (FNS). This algorithm, however, has the drawback that its performance deteriorates when the population size grows. The same drawback applies also to other non-dominating sorting algorithms such as the Efficient Non-dominated Sort with Binary Strategy (ENS-BS). An algorithm suggested to overcome this drawback is the Divide-and-Conquer Non-dominated Sort (DCNS) which works well on a limited number of objectives but deteriorates when the number of objectives grows. This article presents a new, more efficient algorithm called the Efficient Non-dominated Sort with Non-Dominated Tree (ENS-NDT). ENS-NDT is an extension of the ENS-BS algorithm and uses a novel Non-Dominated Tree (NDTree) to speed up the non-dominated sorting. ENS-NDT is able to handle large population sizes and a large number of objectives more efficiently than existing algorithms for non-dominated sorting. In the article, it is shown that with ENS-NDT the runtime of multi-objective optimization algorithms such as the Non-Dominated Sorting Genetic Algorithm II (NSGA-II) can be substantially reduced.
Simple sorting algorithm test based on CUDA
Meng, Hongyu; Guo, Fangjin
2015-01-01
With the development of computing technology, CUDA has become a very important tool. In computer programming, sorting algorithm is widely used. There are many simple sorting algorithms such as enumeration sort, bubble sort and merge sort. In this paper, we test some simple sorting algorithm based on CUDA and draw some useful conclusions.
Directory of Open Access Journals (Sweden)
Rubén Iván Bolaños
2015-06-01
Full Text Available This paper considers a multi-objective version of the Multiple Traveling Salesman Problem (MOmTSP. In particular, two objectives are considered: the minimization of the total traveled distance and the balance of the working times of the traveling salesmen. The problem is formulated as an integer multi-objective optimization model. A non-dominated sorting genetic algorithm (NSGA-II is proposed to solve the MOmTSP. The solution scheme allows one to find a set of ordered solutions in Pareto fronts by considering the concept of dominance. Tests on real world instances and instances adapted from the literature show the effectiveness of the proposed algorithm.
Categorizing Variations of Student-Implemented Sorting Algorithms
Taherkhani, Ahmad; Korhonen, Ari; Malmi, Lauri
2012-01-01
In this study, we examined freshmen students' sorting algorithm implementations in data structures and algorithms' course in two phases: at the beginning of the course before the students received any instruction on sorting algorithms, and after taking a lecture on sorting algorithms. The analysis revealed that many students have insufficient…
Engineering a Cache-Oblivious Sorting Algorithm
DEFF Research Database (Denmark)
Brodal, Gerth Stølting; Fagerberg, Rolf; Vinther, Kristoffer
2007-01-01
This paper is an algorithmic engineering study of cache-oblivious sorting. We investigate by empirical methods a number of implementation issues and parameter choices for the cache-oblivious sorting algorithm Lazy Funnelsort, and compare the final algorithm with Quicksort, the established standard...
Institute of Scientific and Technical Information of China (English)
Xi JIN; Jie ZHANG; Jin-liang GAO; Wen-yan WU
2008-01-01
Through the transformation of hydraulic constraints into the objective functions associated with a water supply network rehabilitation problem, a non-dominated sorting Genetic Aigorithm-Ⅱ (NSGA-Ⅱ) can be used to solve the altered multi-objective optimization model. The introduction of NSGA-Ⅱ into water supply network optimal rehabilitation problem solves the conflict between one fitness value of standard genetic algorithm (SGA) and multi-objectives of rehabilitation problem. And the uncertainties brought by using weight coefficients or punish functions in conventional methods are controlled. And also by introduction of artificial inducement mutation (AIM) operation, the convergence speed of population is accelerated; this operation not only improves the convergence speed, but also improves the rationality and feasibility of solutions.
Algorithm 426 : Merge sort algorithm [M1
Bron, C.
1972-01-01
Sorting by means of a two-way merge has a reputation of requiring a clerically complicated and cumbersome program. This ALGOL 60 procedure demonstrates that, using recursion, an elegant and efficient algorithm can be designed, the correctness of which is easily proved [2]. Sorting n objects gives
Advanced optimization of permanent magnet wigglers using a genetic algorithm
Energy Technology Data Exchange (ETDEWEB)
Hajima, Ryoichi [Univ. of Tokyo (Japan)
1995-12-31
In permanent magnet wigglers, magnetic imperfection of each magnet piece causes field error. This field error can be reduced or compensated by sorting magnet pieces in proper order. We showed a genetic algorithm has good property for this sorting scheme. In this paper, this optimization scheme is applied to the case of permanent magnets which have errors in the direction of field. The result shows the genetic algorithm is superior to other algorithms.
Advanced optimization of permanent magnet wigglers using a genetic algorithm
International Nuclear Information System (INIS)
Hajima, Ryoichi
1995-01-01
In permanent magnet wigglers, magnetic imperfection of each magnet piece causes field error. This field error can be reduced or compensated by sorting magnet pieces in proper order. We showed a genetic algorithm has good property for this sorting scheme. In this paper, this optimization scheme is applied to the case of permanent magnets which have errors in the direction of field. The result shows the genetic algorithm is superior to other algorithms
Enhancement of Selection, Bubble and Insertion Sorting Algorithm
Muhammad Farooq Umar; Ehsan Ullah Munir; Shafqat Ali Shad; Muhammad Wasif Nisar
2014-01-01
In everyday life there is a large amount of data to arrange because sorting removes any ambiguities and make the data analysis and data processing very easy, efficient and provides with cost less effort. In this study a set of improved sorting algorithms are proposed which gives better performance and design idea. In this study five new sorting algorithms (Bi-directional Selection Sort, Bi-directional bubble sort, MIDBiDirectional Selection Sort, MIDBidirectional bubble sort and linear insert...
Fuzzy ranking based non-dominated sorting genetic algorithm-II for network overload alleviation
Directory of Open Access Journals (Sweden)
Pandiarajan K.
2014-09-01
Full Text Available This paper presents an effective method of network overload management in power systems. The three competing objectives 1 generation cost 2 transmission line overload and 3 real power loss are optimized to provide pareto-optimal solutions. A fuzzy ranking based non-dominated sorting genetic algorithm-II (NSGA-II is used to solve this complex nonlinear optimization problem. The minimization of competing objectives is done by generation rescheduling. Fuzzy ranking method is employed to extract the best compromise solution out of the available non-dominated solutions depending upon its highest rank. N-1 contingency analysis is carried out to identify the most severe lines and those lines are selected for outage. The effectiveness of the proposed approach is demonstrated for different contingency cases in IEEE 30 and IEEE 118 bus systems with smooth cost functions and their results are compared with other single objective evolutionary algorithms like Particle swarm optimization (PSO and Differential evolution (DE. Simulation results show the effectiveness of the proposed approach to generate well distributed pareto-optimal non-dominated solutions of multi-objective problem
Sorting on STAR. [CDC computer algorithm timing comparison
Stone, H. S.
1978-01-01
Timing comparisons are given for three sorting algorithms written for the CDC STAR computer. One algorithm is Hoare's (1962) Quicksort, which is the fastest or nearly the fastest sorting algorithm for most computers. A second algorithm is a vector version of Quicksort that takes advantage of the STAR's vector operations. The third algorithm is an adaptation of Batcher's (1968) sorting algorithm, which makes especially good use of vector operations but has a complexity of N(log N)-squared as compared with a complexity of N log N for the Quicksort algorithms. In spite of its worse complexity, Batcher's sorting algorithm is competitive with the serial version of Quicksort for vectors up to the largest that can be treated by STAR. Vector Quicksort outperforms the other two algorithms and is generally preferred. These results indicate that unusual instruction sets can introduce biases in program execution time that counter results predicted by worst-case asymptotic complexity analysis.
An empirical study on SAJQ (Sorting Algorithm for Join Queries
Directory of Open Access Journals (Sweden)
Hassan I. Mathkour
2010-06-01
Full Text Available Most queries that applied on database management systems (DBMS depend heavily on the performance of the used sorting algorithm. In addition to have an efficient sorting algorithm, as a primary feature, stability of such algorithms is a major feature that is needed in performing DBMS queries. In this paper, we study a new Sorting Algorithm for Join Queries (SAJQ that has both advantages of being efficient and stable. The proposed algorithm takes the advantage of using the m-way-merge algorithm in enhancing its time complexity. SAJQ performs the sorting operation in a time complexity of O(nlogm, where n is the length of the input array and m is number of sub-arrays used in sorting. An unsorted input array of length n is arranged into m sorted sub-arrays. The m-way-merge algorithm merges the sorted m sub-arrays into the final output sorted array. The proposed algorithm keeps the stability of the keys intact. An analytical proof has been conducted to prove that, in the worst case, the proposed algorithm has a complexity of O(nlogm. Also, a set of experiments has been performed to investigate the performance of the proposed algorithm. The experimental results have shown that the proposed algorithm outperforms other Stable–Sorting algorithms that are designed for join-based queries.
Queue and stack sorting algorithm optimization and performance analysis
Qian, Mingzhu; Wang, Xiaobao
2018-04-01
Sorting algorithm is one of the basic operation of a variety of software development, in data structures course specializes in all kinds of sort algorithm. The performance of the sorting algorithm is directly related to the efficiency of the software. A lot of excellent scientific research queue is constantly optimizing algorithm, algorithm efficiency better as far as possible, the author here further research queue combined with stacks of sorting algorithms, the algorithm is mainly used for alternating operation queue and stack storage properties, Thus avoiding the need for a large number of exchange or mobile operations in the traditional sort. Before the existing basis to continue research, improvement and optimization, the focus on the optimization of the time complexity of the proposed optimization and improvement, The experimental results show that the improved effectively, at the same time and the time complexity and space complexity of the algorithm, the stability study corresponding research. The improvement and optimization algorithm, improves the practicability.
Algorithm Sorts Groups Of Data
Evans, J. D.
1987-01-01
For efficient sorting, algorithm finds set containing minimum or maximum most significant data. Sets of data sorted as desired. Sorting process simplified by reduction of each multielement set of data to single representative number. First, each set of data expressed as polynomial with suitably chosen base, using elements of set as coefficients. Most significant element placed in term containing largest exponent. Base selected by examining range in value of data elements. Resulting series summed to yield single representative number. Numbers easily sorted, and each such number converted back to original set of data by successive division. Program written in BASIC.
Directory of Open Access Journals (Sweden)
Qianwang Deng
2017-01-01
Full Text Available Flexible job-shop scheduling problem (FJSP is an NP-hard puzzle which inherits the job-shop scheduling problem (JSP characteristics. This paper presents a bee evolutionary guiding nondominated sorting genetic algorithm II (BEG-NSGA-II for multiobjective FJSP (MO-FJSP with the objectives to minimize the maximal completion time, the workload of the most loaded machine, and the total workload of all machines. It adopts a two-stage optimization mechanism during the optimizing process. In the first stage, the NSGA-II algorithm with T iteration times is first used to obtain the initial population N, in which a bee evolutionary guiding scheme is presented to exploit the solution space extensively. In the second stage, the NSGA-II algorithm with GEN iteration times is used again to obtain the Pareto-optimal solutions. In order to enhance the searching ability and avoid the premature convergence, an updating mechanism is employed in this stage. More specifically, its population consists of three parts, and each of them changes with the iteration times. What is more, numerical simulations are carried out which are based on some published benchmark instances. Finally, the effectiveness of the proposed BEG-NSGA-II algorithm is shown by comparing the experimental results and the results of some well-known algorithms already existed.
Deng, Qianwang; Gong, Guiliang; Gong, Xuran; Zhang, Like; Liu, Wei; Ren, Qinghua
2017-01-01
Flexible job-shop scheduling problem (FJSP) is an NP-hard puzzle which inherits the job-shop scheduling problem (JSP) characteristics. This paper presents a bee evolutionary guiding nondominated sorting genetic algorithm II (BEG-NSGA-II) for multiobjective FJSP (MO-FJSP) with the objectives to minimize the maximal completion time, the workload of the most loaded machine, and the total workload of all machines. It adopts a two-stage optimization mechanism during the optimizing process. In the first stage, the NSGA-II algorithm with T iteration times is first used to obtain the initial population N , in which a bee evolutionary guiding scheme is presented to exploit the solution space extensively. In the second stage, the NSGA-II algorithm with GEN iteration times is used again to obtain the Pareto-optimal solutions. In order to enhance the searching ability and avoid the premature convergence, an updating mechanism is employed in this stage. More specifically, its population consists of three parts, and each of them changes with the iteration times. What is more, numerical simulations are carried out which are based on some published benchmark instances. Finally, the effectiveness of the proposed BEG-NSGA-II algorithm is shown by comparing the experimental results and the results of some well-known algorithms already existed.
Tradeoffs Between Branch Mispredictions and Comparisons for Sorting Algorithms
DEFF Research Database (Denmark)
Brodal, Gerth Stølting; Moruz, Gabriel
2005-01-01
Branch mispredictions is an important factor affecting the running time in practice. In this paper we consider tradeoffs between the number of branch mispredictions and the number of comparisons for sorting algorithms in the comparison model. We prove that a sorting algorithm using O(dnlog n......) comparisons performs Omega(nlogd n) branch mispredictions. We show that Multiway MergeSort achieves this tradeoff by adopting a multiway merger with a low number of branch mispredictions. For adaptive sorting algorithms we similarly obtain that an algorithm performing O(dn(1+log (1+Inv/n))) comparisons must...... perform Omega(nlogd (1+Inv/n)) branch mispredictions, where Inv is the number of inversions in the input. This tradeoff can be achieved by GenericSort by Estivill-Castro and Wood by adopting a multiway division protocol and a multiway merging algorithm with a low number of branch mispredictions....
Zheng, Ling; Duan, Xuwei; Deng, Zhaoxue; Li, Yinong
2014-03-01
A novel flow-mode magneto-rheological (MR) engine mount integrated a diaphragm de-coupler and the spoiler plate is designed and developed to isolate engine and the transmission from the chassis in a wide frequency range and overcome the stiffness in high frequency. A lumped parameter model of the MR engine mount in single degree of freedom system is further developed based on bond graph method to predict the performance of the MR engine mount accurately. The optimization mathematical model is established to minimize the total of force transmissibility over several frequency ranges addressed. In this mathematical model, the lumped parameters are considered as design variables. The maximum of force transmissibility and the corresponding frequency in low frequency range as well as individual lumped parameter are limited as constraints. The multiple interval sensitivity analysis method is developed to select the optimized variables and improve the efficiency of optimization process. An improved non-dominated sorting genetic algorithm (NSGA-II) is used to solve the multi-objective optimization problem. The synthesized distance between the individual in Pareto set and the individual in possible set in engineering is defined and calculated. A set of real design parameters is thus obtained by the internal relationship between the optimal lumped parameters and practical design parameters for the MR engine mount. The program flowchart for the improved non-dominated sorting genetic algorithm (NSGA-II) is given. The obtained results demonstrate the effectiveness of the proposed optimization approach in minimizing the total of force transmissibility over several frequency ranges addressed.
NeatSort - A practical adaptive algorithm
La Rocca, Marcello; Cantone, Domenico
2014-01-01
We present a new adaptive sorting algorithm which is optimal for most disorder metrics and, more important, has a simple and quick implementation. On input $X$, our algorithm has a theoretical $\\Omega (|X|)$ lower bound and a $\\mathcal{O}(|X|\\log|X|)$ upper bound, exhibiting amazing adaptive properties which makes it run closer to its lower bound as disorder (computed on different metrics) diminishes. From a practical point of view, \\textit{NeatSort} has proven itself competitive with (and of...
International Nuclear Information System (INIS)
Chen, Fang; Zhou, Jianzhong; Wang, Chao; Li, Chunlong; Lu, Peng
2017-01-01
Wind power is a type of clean and renewable energy, and reasonable utilization of wind power is beneficial to environmental protection and economic development. Therefore, a short-term hydro-thermal-wind economic emission dispatching (SHTW-EED) problem is presented in this paper. The proposed problem aims to distribute the load among hydro, thermal and wind power units to simultaneously minimize economic cost and pollutant emission. To solve the SHTW-EED problem with complex constraints, a modified gravitational search algorithm based on the non-dominated sorting genetic algorithm-III (MGSA-NSGA-III) is proposed. In the proposed MGSA-NSGA-III, a non-dominated sorting approach, reference-point based selection mechanism and chaotic mutation strategy are applied to improve the evolutionary process of the original gravitational search algorithm (GSA) and maintain the distribution diversity of Pareto optimal solutions. Moreover, a parallel computing strategy is introduced to improve the computational efficiency. Finally, the proposed MGSA-NSGA-III is applied to a typical hydro-thermal-wind system to verify its feasibility and effectiveness. The simulation results indicate that the proposed algorithm can obtain low economic cost and small pollutant emission when dealing with the SHTW-EED problem. - Highlights: • A hybrid algorithm is proposed to handle hydro-thermal-wind power dispatching. • Several improvement strategies are applied to the algorithm. • A parallel computing strategy is applied to improve computational efficiency. • Two cases are analyzed to verify the efficiency of the optimize mode.
Rout, Sachindra K.; Choudhury, Balaji K.; Sahoo, Ranjit K.; Sarangi, Sunil K.
2014-07-01
The modeling and optimization of a Pulse Tube Refrigerator is a complicated task, due to its complexity of geometry and nature. The aim of the present work is to optimize the dimensions of pulse tube and regenerator for an Inertance-Type Pulse Tube Refrigerator (ITPTR) by using Response Surface Methodology (RSM) and Non-Sorted Genetic Algorithm II (NSGA II). The Box-Behnken design of the response surface methodology is used in an experimental matrix, with four factors and two levels. The diameter and length of the pulse tube and regenerator are chosen as the design variables where the rest of the dimensions and operating conditions of the ITPTR are constant. The required output responses are the cold head temperature (Tcold) and compressor input power (Wcomp). Computational fluid dynamics (CFD) have been used to model and solve the ITPTR. The CFD results agreed well with those of the previously published paper. Also using the results from the 1-D simulation, RSM is conducted to analyse the effect of the independent variables on the responses. To check the accuracy of the model, the analysis of variance (ANOVA) method has been used. Based on the proposed mathematical RSM models a multi-objective optimization study, using the Non-sorted genetic algorithm II (NSGA-II) has been performed to optimize the responses.
Fixing the Sorting Algorithm for Android, Java and Python
C.P.T. de Gouw (Stijn); F.S. de Boer (Frank)
2015-01-01
htmlabstractTim Peters developed the Timsort hybrid sorting algorithm in 2002. TimSort was first developed for Python, a popular programming language, but later ported to Java (where it appears as java.util.Collections.sort and java.util.Arrays.sort). TimSort is today used as the default sorting
Sort-Mid tasks scheduling algorithm in grid computing.
Reda, Naglaa M; Tawfik, A; Marzok, Mohamed A; Khamis, Soheir M
2015-11-01
Scheduling tasks on heterogeneous resources distributed over a grid computing system is an NP-complete problem. The main aim for several researchers is to develop variant scheduling algorithms for achieving optimality, and they have shown a good performance for tasks scheduling regarding resources selection. However, using of the full power of resources is still a challenge. In this paper, a new heuristic algorithm called Sort-Mid is proposed. It aims to maximizing the utilization and minimizing the makespan. The new strategy of Sort-Mid algorithm is to find appropriate resources. The base step is to get the average value via sorting list of completion time of each task. Then, the maximum average is obtained. Finally, the task has the maximum average is allocated to the machine that has the minimum completion time. The allocated task is deleted and then, these steps are repeated until all tasks are allocated. Experimental tests show that the proposed algorithm outperforms almost other algorithms in terms of resources utilization and makespan.
Genetic Algorithm Optimizes Q-LAW Control Parameters
Lee, Seungwon; von Allmen, Paul; Petropoulos, Anastassios; Terrile, Richard
2008-01-01
A document discusses a multi-objective, genetic algorithm designed to optimize Lyapunov feedback control law (Q-law) parameters in order to efficiently find Pareto-optimal solutions for low-thrust trajectories for electronic propulsion systems. These would be propellant-optimal solutions for a given flight time, or flight time optimal solutions for a given propellant requirement. The approximate solutions are used as good initial solutions for high-fidelity optimization tools. When the good initial solutions are used, the high-fidelity optimization tools quickly converge to a locally optimal solution near the initial solution. Q-law control parameters are represented as real-valued genes in the genetic algorithm. The performances of the Q-law control parameters are evaluated in the multi-objective space (flight time vs. propellant mass) and sorted by the non-dominated sorting method that assigns a better fitness value to the solutions that are dominated by a fewer number of other solutions. With the ranking result, the genetic algorithm encourages the solutions with higher fitness values to participate in the reproduction process, improving the solutions in the evolution process. The population of solutions converges to the Pareto front that is permitted within the Q-law control parameter space.
6. Algorithms for Sorting and Searching
Indian Academy of Sciences (India)
Home; Journals; Resonance – Journal of Science Education; Volume 2; Issue 3. Algorithms - Algorithms for Sorting and Searching. R K Shyamasundar. Series Article ... Author Affiliations. R K Shyamasundar1. Computer Science Group, Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400 005, India ...
An introduction to three algorithms for sorting in situ
Dijkstra, E.W.; Gasteren, van A.J.M.
1982-01-01
The purpose of this paper is to give a crisp introduction to three algorithms for sorting in situ, viz. insertion sort, heapsort and smoothsort. The more complicated the algorithm, the more elaborate the justification for the design decisions embodied by it. In passing we offer a style for the
Sort-Mid tasks scheduling algorithm in grid computing
Directory of Open Access Journals (Sweden)
Naglaa M. Reda
2015-11-01
Full Text Available Scheduling tasks on heterogeneous resources distributed over a grid computing system is an NP-complete problem. The main aim for several researchers is to develop variant scheduling algorithms for achieving optimality, and they have shown a good performance for tasks scheduling regarding resources selection. However, using of the full power of resources is still a challenge. In this paper, a new heuristic algorithm called Sort-Mid is proposed. It aims to maximizing the utilization and minimizing the makespan. The new strategy of Sort-Mid algorithm is to find appropriate resources. The base step is to get the average value via sorting list of completion time of each task. Then, the maximum average is obtained. Finally, the task has the maximum average is allocated to the machine that has the minimum completion time. The allocated task is deleted and then, these steps are repeated until all tasks are allocated. Experimental tests show that the proposed algorithm outperforms almost other algorithms in terms of resources utilization and makespan.
Malyna, D.V.; Duarte, J.L.; Hendrix, M.A.M.; Horck, van F.B.M.
2007-01-01
A practical example of power electronic converter synthesis is presented, where a multi-objective genetic algorithm, namely non-dominated sorting genetic algorithm (NSGA-II) is used. The optimization algorithm takes an experimentally-derived thermal model for the converter into account. Experimental
Comparison Of Hybrid Sorting Algorithms Implemented On Different Parallel Hardware Platforms
Directory of Open Access Journals (Sweden)
Dominik Zurek
2013-01-01
Full Text Available Sorting is a common problem in computer science. There are lot of well-known sorting algorithms created for sequential execution on a single processor. Recently, hardware platforms enable to create wide parallel algorithms. We have standard processors consist of multiple cores and hardware accelerators like GPU. The graphic cards with their parallel architecture give new possibility to speed up many algorithms. In this paper we describe results of implementation of a few different sorting algorithms on GPU cards and multicore processors. Then hybrid algorithm will be presented which consists of parts executed on both platforms, standard CPU and GPU.
Khoje, Suchitra
2018-02-01
Images of four qualities of mangoes and guavas are evaluated for color and textural features to characterize and classify them, and to model the fruit appearance grading. The paper discusses three approaches to identify most discriminating texture features of both the fruits. In the first approach, fruit's color and texture features are selected using Mahalanobis distance. A total of 20 color features and 40 textural features are extracted for analysis. Using Mahalanobis distance and feature intercorrelation analyses, one best color feature (mean of a* [L*a*b* color space]) and two textural features (energy a*, contrast of H*) are selected as features for Guava while two best color features (R std, H std) and one textural features (energy b*) are selected as features for mangoes with the highest discriminate power. The second approach studies some common wavelet families for searching the best classification model for fruit quality grading. The wavelet features extracted from five basic mother wavelets (db, bior, rbior, Coif, Sym) are explored to characterize fruits texture appearance. In third approach, genetic algorithm is used to select only those color and wavelet texture features that are relevant to the separation of the class, from a large universe of features. The study shows that image color and texture features which were identified using a genetic algorithm can distinguish between various qualities classes of fruits. The experimental results showed that support vector machine classifier is elected for Guava grading with an accuracy of 97.61% and artificial neural network is elected from Mango grading with an accuracy of 95.65%. The proposed method is nondestructive fruit quality assessment method. The experimental results has proven that Genetic algorithm along with wavelet textures feature has potential to discriminate fruit quality. Finally, it can be concluded that discussed method is an accurate, reliable, and objective tool to determine fruit
Energy efficient data sorting using standard sorting algorithms
Bunse, Christian; Hö pfner, Hagen; Roychoudhury, Suman; Mansour, Essam
2011-01-01
Protecting the environment by saving energy and thus reducing carbon dioxide emissions is one of todays hottest and most challenging topics. Although the perspective for reducing energy consumption, from ecological and business perspectives is clear, from a technological point of view, the realization especially for mobile systems still falls behind expectations. Novel strategies that allow (software) systems to dynamically adapt themselves at runtime can be effectively used to reduce energy consumption. This paper presents a case study that examines the impact of using an energy management component that dynamically selects and applies the "optimal" sorting algorithm, from an energy perspective, during multi-party mobile communication. Interestingly, the results indicate that algorithmic performance is not key and that dynamically switching algorithms at runtime does have a significant impact on energy consumption. © Springer-Verlag Berlin Heidelberg 2011.
Automated spike sorting algorithm based on Laplacian eigenmaps and k-means clustering.
Chah, E; Hok, V; Della-Chiesa, A; Miller, J J H; O'Mara, S M; Reilly, R B
2011-02-01
This study presents a new automatic spike sorting method based on feature extraction by Laplacian eigenmaps combined with k-means clustering. The performance of the proposed method was compared against previously reported algorithms such as principal component analysis (PCA) and amplitude-based feature extraction. Two types of classifier (namely k-means and classification expectation-maximization) were incorporated within the spike sorting algorithms, in order to find a suitable classifier for the feature sets. Simulated data sets and in-vivo tetrode multichannel recordings were employed to assess the performance of the spike sorting algorithms. The results show that the proposed algorithm yields significantly improved performance with mean sorting accuracy of 73% and sorting error of 10% compared to PCA which combined with k-means had a sorting accuracy of 58% and sorting error of 10%.A correction was made to this article on 22 February 2011. The spacing of the title was amended on the abstract page. No changes were made to the article PDF and the print version was unaffected.
Directory of Open Access Journals (Sweden)
Ziaul Huque
2012-01-01
Full Text Available A Computational Fluid Dynamics (CFD and response surface-based multiobjective design optimization were performed for six different 2D airfoil profiles, and the Pareto optimal front of each airfoil is presented. FLUENT, which is a commercial CFD simulation code, was used to determine the relevant aerodynamic loads. The Lift Coefficient (CL and Drag Coefficient (CD data at a range of 0° to 12° angles of attack (α and at three different Reynolds numbers (Re=68,459, 479, 210, and 958, 422 for all the six airfoils were obtained. Realizable k-ε turbulence model with a second-order upwind solution method was used in the simulations. The standard least square method was used to generate response surface by the statistical code JMP. Elitist Non-dominated Sorting Genetic Algorithm (NSGA-II was used to determine the Pareto optimal set based on the response surfaces. Each Pareto optimal solution represents a different compromise between design objectives. This gives the designer a choice to select a design compromise that best suits the requirements from a set of optimal solutions. The Pareto solution set is presented in the form of a Pareto optimal front.
Lee, Fook Choon; Rangaiah, Gade Pandu; Ray, Ajay Kumar
2007-10-15
Bulk of the penicillin produced is used as raw material for semi-synthetic penicillin (such as amoxicillin and ampicillin) and semi-synthetic cephalosporins (such as cephalexin and cefadroxil). In the present paper, an industrial penicillin V bioreactor train is optimized for multiple objectives simultaneously. An industrial train, comprising a bank of identical bioreactors, is run semi-continuously in a synchronous fashion. The fermentation taking place in a bioreactor is modeled using a morphologically structured mechanism. For multi-objective optimization for two and three objectives, the elitist non-dominated sorting genetic algorithm (NSGA-II) is chosen. Instead of a single optimum as in the traditional optimization, a wide range of optimal design and operating conditions depicting trade-offs of key performance indicators such as batch cycle time, yield, profit and penicillin concentration, is successfully obtained. The effects of design and operating variables on the optimal solutions are discussed in detail. Copyright 2007 Wiley Periodicals, Inc.
Boon, K H; Khalil-Hani, M; Malarvili, M B
2018-01-01
This paper presents a method that able to predict the paroxysmal atrial fibrillation (PAF). The method uses shorter heart rate variability (HRV) signals when compared to existing methods, and achieves good prediction accuracy. PAF is a common cardiac arrhythmia that increases the health risk of a patient, and the development of an accurate predictor of the onset of PAF is clinical important because it increases the possibility to electrically stabilize and prevent the onset of atrial arrhythmias with different pacing techniques. We propose a multi-objective optimization algorithm based on the non-dominated sorting genetic algorithm III for optimizing the baseline PAF prediction system, that consists of the stages of pre-processing, HRV feature extraction, and support vector machine (SVM) model. The pre-processing stage comprises of heart rate correction, interpolation, and signal detrending. After that, time-domain, frequency-domain, non-linear HRV features are extracted from the pre-processed data in feature extraction stage. Then, these features are used as input to the SVM for predicting the PAF event. The proposed optimization algorithm is used to optimize the parameters and settings of various HRV feature extraction algorithms, select the best feature subsets, and tune the SVM parameters simultaneously for maximum prediction performance. The proposed method achieves an accuracy rate of 87.7%, which significantly outperforms most of the previous works. This accuracy rate is achieved even with the HRV signal length being reduced from the typical 30 min to just 5 min (a reduction of 83%). Furthermore, another significant result is the sensitivity rate, which is considered more important that other performance metrics in this paper, can be improved with the trade-off of lower specificity. Copyright © 2017 Elsevier B.V. All rights reserved.
Validation of neural spike sorting algorithms without ground-truth information.
Barnett, Alex H; Magland, Jeremy F; Greengard, Leslie F
2016-05-01
The throughput of electrophysiological recording is growing rapidly, allowing thousands of simultaneous channels, and there is a growing variety of spike sorting algorithms designed to extract neural firing events from such data. This creates an urgent need for standardized, automatic evaluation of the quality of neural units output by such algorithms. We introduce a suite of validation metrics that assess the credibility of a given automatic spike sorting algorithm applied to a given dataset. By rerunning the spike sorter two or more times, the metrics measure stability under various perturbations consistent with variations in the data itself, making no assumptions about the internal workings of the algorithm, and minimal assumptions about the noise. We illustrate the new metrics on standard sorting algorithms applied to both in vivo and ex vivo recordings, including a time series with overlapping spikes. We compare the metrics to existing quality measures, and to ground-truth accuracy in simulated time series. We provide a software implementation. Metrics have until now relied on ground-truth, simulated data, internal algorithm variables (e.g. cluster separation), or refractory violations. By contrast, by standardizing the interface, our metrics assess the reliability of any automatic algorithm without reference to internal variables (e.g. feature space) or physiological criteria. Stability is a prerequisite for reproducibility of results. Such metrics could reduce the significant human labor currently spent on validation, and should form an essential part of large-scale automated spike sorting and systematic benchmarking of algorithms. Copyright © 2016 Elsevier B.V. All rights reserved.
Al Rivan, Muhammad Ezar
2017-01-01
Ordering is one of the process done before doing data processing. The sorting algorithm has its own strengths and weaknesses. By taking strengths of each algorithm then combined can be a better algorithm. Quick Sort and Merge Sort are algorithms that divide the data into parts and each part divide again into sub-section until one element. Usually one element join with others and then sorted by. In this experiment data divide into parts that have size not more than threshold. This part then so...
International Nuclear Information System (INIS)
Chen, Lei; Yan, Changqi; Liao, Yi; Song, Feifei; Jia, Zhen
2017-01-01
Highlights: • The optimization ability of NSGA-II is improved. • The design targets can be obvious optimized through optimization methodology. • Multi-objective optimization is implanted into the design of nuclear power plant. - Abstract: The design of nuclear component can be optimized by seeking out the best combination of article operational and structural parameters. Through multi-objective optimization, the optimized scheme can not only meets the design requirements, but also satisfies the safety regulations. In this work, a hybrid non-dominated sorting genetic algorithm is proposed, and its performance is verified by comparing it with its prototype and immune memory clone constraint multi-objective algorithm through four test-functions; the designs of the steam generator and the primary loop of Qinshan I nuclear power plant are optimized by the proposed algorithm. The results show that the algorithm outperforms the other two through overall evaluation; the reactor inlet temperature is an important parameter which influences the distribution of the Pareto optimal front; through optimization, the weight of the steam generator can be reduced by 16.5%, and the primary flow-rate can be reduced by 17.0%, the weight of the primary loop can be reduced by 11.4%, and the volume can be reduced by 9.8%.
Umbarkar, A. J.; Balande, U. T.; Seth, P. D.
2017-06-01
The field of nature inspired computing and optimization techniques have evolved to solve difficult optimization problems in diverse fields of engineering, science and technology. The firefly attraction process is mimicked in the algorithm for solving optimization problems. In Firefly Algorithm (FA) sorting of fireflies is done by using sorting algorithm. The original FA is proposed with bubble sort for ranking the fireflies. In this paper, the quick sort replaces bubble sort to decrease the time complexity of FA. The dataset used is unconstrained benchmark functions from CEC 2005 [22]. The comparison of FA using bubble sort and FA using quick sort is performed with respect to best, worst, mean, standard deviation, number of comparisons and execution time. The experimental result shows that FA using quick sort requires less number of comparisons but requires more execution time. The increased number of fireflies helps to converge into optimal solution whereas by varying dimension for algorithm performed better at a lower dimension than higher dimension.
ALGORITHM FOR SORTING GROUPED DATA
Evans, J. D.
1994-01-01
It is often desirable to sort data sets in ascending or descending order. This becomes more difficult for grouped data, i.e., multiple sets of data, where each set of data involves several measurements or related elements. The sort becomes increasingly cumbersome when more than a few elements exist for each data set. In order to achieve an efficient sorting process, an algorithm has been devised in which the maximum most significant element is found, and then compared to each element in succession. The program was written to handle the daily temperature readings of the Voyager spacecraft, particularly those related to the special tracking requirements of Voyager 2. By reducing each data set to a single representative number, the sorting process becomes very easy. The first step in the process is to reduce the data set of width 'n' to a data set of width '1'. This is done by representing each data set by a polynomial of length 'n' based on the differences of the maximum and minimum elements. These single numbers are then sorted and converted back to obtain the original data sets. Required input data are the name of the data file to read and sort, and the starting and ending record numbers. The package includes a sample data file, containing 500 sets of data with 5 elements in each set. This program will perform a sort of the 500 data sets in 3 - 5 seconds on an IBM PC-AT with a hard disk; on a similarly equipped IBM PC-XT the time is under 10 seconds. This program is written in BASIC (specifically the Microsoft QuickBasic compiler) for interactive execution and has been implemented on the IBM PC computer series operating under PC-DOS with a central memory requirement of approximately 40K of 8 bit bytes. A hard disk is desirable for speed considerations, but is not required. This program was developed in 1986.
Efficient Out of Core Sorting Algorithms for the Parallel Disks Model.
Kundeti, Vamsi; Rajasekaran, Sanguthevar
2011-11-01
In this paper we present efficient algorithms for sorting on the Parallel Disks Model (PDM). Numerous asymptotically optimal algorithms have been proposed in the literature. However many of these merge based algorithms have large underlying constants in the time bounds, because they suffer from the lack of read parallelism on PDM. The irregular consumption of the runs during the merge affects the read parallelism and contributes to the increased sorting time. In this paper we first introduce a novel idea called the dirty sequence accumulation that improves the read parallelism. Secondly, we show analytically that this idea can reduce the number of parallel I/O's required to sort the input close to the lower bound of [Formula: see text]. We experimentally verify our dirty sequence idea with the standard R-Way merge and show that our idea can reduce the number of parallel I/Os to sort on PDM significantly.
A novel automated spike sorting algorithm with adaptable feature extraction.
Bestel, Robert; Daus, Andreas W; Thielemann, Christiane
2012-10-15
To study the electrophysiological properties of neuronal networks, in vitro studies based on microelectrode arrays have become a viable tool for analysis. Although in constant progress, a challenging task still remains in this area: the development of an efficient spike sorting algorithm that allows an accurate signal analysis at the single-cell level. Most sorting algorithms currently available only extract a specific feature type, such as the principal components or Wavelet coefficients of the measured spike signals in order to separate different spike shapes generated by different neurons. However, due to the great variety in the obtained spike shapes, the derivation of an optimal feature set is still a very complex issue that current algorithms struggle with. To address this problem, we propose a novel algorithm that (i) extracts a variety of geometric, Wavelet and principal component-based features and (ii) automatically derives a feature subset, most suitable for sorting an individual set of spike signals. Thus, there is a new approach that evaluates the probability distribution of the obtained spike features and consequently determines the candidates most suitable for the actual spike sorting. These candidates can be formed into an individually adjusted set of spike features, allowing a separation of the various shapes present in the obtained neuronal signal by a subsequent expectation maximisation clustering algorithm. Test results with simulated data files and data obtained from chick embryonic neurons cultured on microelectrode arrays showed an excellent classification result, indicating the superior performance of the described algorithm approach. Copyright © 2012 Elsevier B.V. All rights reserved.
A 1.375-approximation algorithm for sorting by transpositions.
Elias, Isaac; Hartman, Tzvika
2006-01-01
Sorting permutations by transpositions is an important problem in genome rearrangements. A transposition is a rearrangement operation in which a segment is cut out of the permutation and pasted in a different location. The complexity of this problem is still open and it has been a 10-year-old open problem to improve the best known 1.5-approximation algorithm. In this paper, we provide a 1.375-approximation algorithm for sorting by transpositions. The algorithm is based on a new upper bound on the diameter of 3-permutations. In addition, we present some new results regarding the transposition diameter: we improve the lower bound for the transposition diameter of the symmetric group and determine the exact transposition diameter of simple permutations.
The Methods and Goals of Teaching Sorting Algorithms in Public Education
Bernát, Péter
2014-01-01
The topic of sorting algorithms is a pleasant subject of informatics education. Not only is it so because the notion of sorting is well known from our everyday life, but also because as an algorithm task, whether we expect naive or practical solutions, it is easy to define and demonstrate. In my paper I will present some of the possible methods…
Perbandingan Bubble Sort dengan Insertion Sort pada Bahasa Pemrograman C dan Fortran
Reina, Reina; Gautama, Josef Bernadi
2013-01-01
Sorting is a basic algorithm studied by students of computer science major. Sorting algorithm is the basis of other algorithms such as searching algorithm, pattern matching algorithm. Bubble sort is a popular basic sorting algorithm due to its easiness to be implemented. Besides bubble sort, there is insertion sort. It is lesspopular than bubble sort because it has more difficult algorithm. This paper discusses about process time between insertion sort and bubble sort with two kinds of data. ...
Magnet sorting algorithms for insertion devices for the Advanced Light Source
International Nuclear Information System (INIS)
Humphries, D.; Hoyer, E.; Kincaid, B.; Marks, S.; Schlueter, R.
1994-01-01
Insertion devices for the Advanced Light Source (ALS) incorporate up to 3,000 magnet blocks each for pole energization. In order to minimize field errors, these magnets must be measured, sorted and assigned appropriate locations and orientation in the magnetic structures. Sorting must address multiple objectives, including pole excitation and minimization of integrated multipole fields from minor field components in the magnets. This is equivalent to a combinatorial minimization problem with a large configuration space. Multi-stage sorting algorithms use ordering and pairing schemes in conjunction with other combinatorial methods to solve the minimization problem. This paper discusses objective functions, solution algorithms and results of application to magnet block measurement data
Verification of counting sort and radix sort
C.P.T. de Gouw (Stijn); F.S. de Boer (Frank); J.C. Rot (Jurriaan)
2016-01-01
textabstractSorting is an important algorithmic task used in many applications. Two main aspects of sorting algorithms which have been studied extensively are complexity and correctness. [Foley and Hoare, 1971] published the first formal correctness proof of a sorting algorithm (Quicksort). While
Wang, Lui; Bayer, Steven E.
1991-01-01
Genetic algorithms are mathematical, highly parallel, adaptive search procedures (i.e., problem solving methods) based loosely on the processes of natural genetics and Darwinian survival of the fittest. Basic genetic algorithms concepts are introduced, genetic algorithm applications are introduced, and results are presented from a project to develop a software tool that will enable the widespread use of genetic algorithm technology.
Oh, Cheolhwan; Huang, Xiaodong; Regnier, Fred E; Buck, Charles; Zhang, Xiang
2008-02-01
We report a novel peak sorting method for the two-dimensional gas chromatography/time-of-flight mass spectrometry (GC x GC/TOF-MS) system. The objective of peak sorting is to recognize peaks from the same metabolite occurring in different samples from thousands of peaks detected in the analytical procedure. The developed algorithm is based on the fact that the chromatographic peaks for a given analyte have similar retention times in all of the chromatograms. Raw instrument data are first processed by ChromaTOF (Leco) software to provide the peak tables. Our algorithm achieves peak sorting by utilizing the first- and second-dimension retention times in the peak tables and the mass spectra generated during the process of electron impact ionization. The algorithm searches the peak tables for the peaks generated by the same type of metabolite using several search criteria. Our software also includes options to eliminate non-target peaks from the sorting results, e.g., peaks of contaminants. The developed software package has been tested using a mixture of standard metabolites and another mixture of standard metabolites spiked into human serum. Manual validation demonstrates high accuracy of peak sorting with this algorithm.
Perbandingan Bubble Sort dengan Insertion Sort pada Bahasa Pemrograman C dan Fortran
Directory of Open Access Journals (Sweden)
Reina Reina
2013-12-01
Full Text Available Sorting is a basic algorithm studied by students of computer science major. Sorting algorithm is the basis of other algorithms such as searching algorithm, pattern matching algorithm. Bubble sort is a popular basic sorting algorithm due to its easiness to be implemented. Besides bubble sort, there is insertion sort. It is lesspopular than bubble sort because it has more difficult algorithm. This paper discusses about process time between insertion sort and bubble sort with two kinds of data. First is randomized data, and the second is data of descending list. Comparison of process time has been done in two kinds of programming language that is C programming language and FORTRAN programming language. The result shows that bubble sort needs more time than insertion sort does.
Threshold-selecting strategy for best possible ground state detection with genetic algorithms
Lässig, Jörg; Hoffmann, Karl Heinz
2009-04-01
Genetic algorithms are a standard heuristic to find states of low energy in complex state spaces as given by physical systems such as spin glasses but also in combinatorial optimization. The paper considers the problem of selecting individuals in the current population in genetic algorithms for crossover. Many schemes have been considered in literature as possible crossover selection strategies. We show for a large class of quality measures that the best possible probability distribution for selecting individuals in each generation of the algorithm execution is a rectangular distribution over the individuals sorted by their energy values. This means uniform probabilities have to be assigned to a group of the individuals with lowest energy in the population but probabilities equal to zero to individuals which are corresponding to energy values higher than a fixed cutoff, which is equal to a certain rank in the vector sorted by the energy of the states in the current population. The considered strategy is dubbed threshold selecting. The proof applies basic arguments of Markov chains and linear optimization and makes only a few assumptions on the underlying principles and hence applies to a large class of algorithms.
Comparison of spike-sorting algorithms for future hardware implementation.
Gibson, Sarah; Judy, Jack W; Markovic, Dejan
2008-01-01
Applications such as brain-machine interfaces require hardware spike sorting in order to (1) obtain single-unit activity and (2) perform data reduction for wireless transmission of data. Such systems must be low-power, low-area, high-accuracy, automatic, and able to operate in real time. Several detection and feature extraction algorithms for spike sorting are described briefly and evaluated in terms of accuracy versus computational complexity. The nonlinear energy operator method is chosen as the optimal spike detection algorithm, being most robust over noise and relatively simple. The discrete derivatives method [1] is chosen as the optimal feature extraction method, maintaining high accuracy across SNRs with a complexity orders of magnitude less than that of traditional methods such as PCA.
An algorithm for 4D CT image sorting using spatial continuity.
Li, Chen; Liu, Jie
2013-01-01
4D CT, which could locate the position of the movement of the tumor in the entire respiratory cycle and reduce image artifacts effectively, has been widely used in making radiation therapy of tumors. The current 4D CT methods required external surrogates of respiratory motion obtained from extra instruments. However, respiratory signals recorded by these external makers may not always accurately represent the internal tumor and organ movements, especially when irregular breathing patterns happened. In this paper we have proposed a novel automatic 4D CT sorting algorithm that performs without these external surrogates. The sorting algorithm requires collecting the image data with a cine scan protocol. Beginning with the first couch position, images from the adjacent couch position are selected out according to spatial continuity. The process is continued until images from all couch positions are sorted and the entire 3D volume is produced. The algorithm is verified by respiratory phantom image data and clinical image data. The primary test results show that the 4D CT images created by our algorithm have eliminated the motion artifacts effectively and clearly demonstrated the movement of tumor and organ in the breath period.
International Nuclear Information System (INIS)
Yang, Yu; Fritzsching, Keith J.; Hong, Mei
2013-01-01
A multi-objective genetic algorithm is introduced to predict the assignment of protein solid-state NMR (SSNMR) spectra with partial resonance overlap and missing peaks due to broad linewidths, molecular motion, and low sensitivity. This non-dominated sorting genetic algorithm II (NSGA-II) aims to identify all possible assignments that are consistent with the spectra and to compare the relative merit of these assignments. Our approach is modeled after the recently introduced Monte-Carlo simulated-annealing (MC/SA) protocol, with the key difference that NSGA-II simultaneously optimizes multiple assignment objectives instead of searching for possible assignments based on a single composite score. The multiple objectives include maximizing the number of consistently assigned peaks between multiple spectra (“good connections”), maximizing the number of used peaks, minimizing the number of inconsistently assigned peaks between spectra (“bad connections”), and minimizing the number of assigned peaks that have no matching peaks in the other spectra (“edges”). Using six SSNMR protein chemical shift datasets with varying levels of imperfection that was introduced by peak deletion, random chemical shift changes, and manual peak picking of spectra with moderately broad linewidths, we show that the NSGA-II algorithm produces a large number of valid and good assignments rapidly. For high-quality chemical shift peak lists, NSGA-II and MC/SA perform similarly well. However, when the peak lists contain many missing peaks that are uncorrelated between different spectra and have chemical shift deviations between spectra, the modified NSGA-II produces a larger number of valid solutions than MC/SA, and is more effective at distinguishing good from mediocre assignments by avoiding the hazard of suboptimal weighting factors for the various objectives. These two advantages, namely diversity and better evaluation, lead to a higher probability of predicting the correct
Yang, Yu; Fritzsching, Keith J; Hong, Mei
2013-11-01
A multi-objective genetic algorithm is introduced to predict the assignment of protein solid-state NMR (SSNMR) spectra with partial resonance overlap and missing peaks due to broad linewidths, molecular motion, and low sensitivity. This non-dominated sorting genetic algorithm II (NSGA-II) aims to identify all possible assignments that are consistent with the spectra and to compare the relative merit of these assignments. Our approach is modeled after the recently introduced Monte-Carlo simulated-annealing (MC/SA) protocol, with the key difference that NSGA-II simultaneously optimizes multiple assignment objectives instead of searching for possible assignments based on a single composite score. The multiple objectives include maximizing the number of consistently assigned peaks between multiple spectra ("good connections"), maximizing the number of used peaks, minimizing the number of inconsistently assigned peaks between spectra ("bad connections"), and minimizing the number of assigned peaks that have no matching peaks in the other spectra ("edges"). Using six SSNMR protein chemical shift datasets with varying levels of imperfection that was introduced by peak deletion, random chemical shift changes, and manual peak picking of spectra with moderately broad linewidths, we show that the NSGA-II algorithm produces a large number of valid and good assignments rapidly. For high-quality chemical shift peak lists, NSGA-II and MC/SA perform similarly well. However, when the peak lists contain many missing peaks that are uncorrelated between different spectra and have chemical shift deviations between spectra, the modified NSGA-II produces a larger number of valid solutions than MC/SA, and is more effective at distinguishing good from mediocre assignments by avoiding the hazard of suboptimal weighting factors for the various objectives. These two advantages, namely diversity and better evaluation, lead to a higher probability of predicting the correct assignment for a
Performance comparison of extracellular spike sorting algorithms for single-channel recordings.
Wild, Jiri; Prekopcsak, Zoltan; Sieger, Tomas; Novak, Daniel; Jech, Robert
2012-01-30
Proper classification of action potentials from extracellular recordings is essential for making an accurate study of neuronal behavior. Many spike sorting algorithms have been presented in the technical literature. However, no comparative analysis has hitherto been performed. In our study, three widely-used publicly-available spike sorting algorithms (WaveClus, KlustaKwik, OSort) were compared with regard to their parameter settings. The algorithms were evaluated using 112 artificial signals (publicly available online) with 2-9 different neurons and varying noise levels between 0.00 and 0.60. An optimization technique based on Adjusted Mutual Information was employed to find near-optimal parameter settings for a given artificial signal and algorithm. All three algorithms performed significantly better (psorting algorithm, receiving the best evaluation score for 60% of all signals. OSort operated at almost five times the speed of the other algorithms. In terms of accuracy, OSort performed significantly less well (palgorithms was optimal in general. The accuracy of the algorithms depended on proper choice of the algorithm parameters and also on specific properties of the examined signal. Copyright © 2011 Elsevier B.V. All rights reserved.
Algorithms for the Automatic Classification and Sorting of Conifers in the Garden Nursery Industry
DEFF Research Database (Denmark)
Petri, Stig
with the classification and sorting of plants using machine vision have been discussed as an introduction to the work reported here. The use of Nordmann firs as a basis for evaluating the developed algorithms naturally introduces a bias towards this species in the algorithms, but steps have been taken throughout...... was used as the basis for evaluating the constructed feature extraction algorithms. Through an analysis of the construction of a machine vision system suitable for classifying and sorting plants, the needs with regard to physical frame, lighting system, camera and software algorithms have been uncovered......The ultimate purpose of this work is the development of general feature extraction algorithms useful for the classification and sorting of plants in the garden nursery industry. Narrowing the area of focus to bare-root plants, more specifically Nordmann firs, the scientific literature dealing...
A real time sorting algorithm to time sort any deterministic time disordered data stream
Saini, J.; Mandal, S.; Chakrabarti, A.; Chattopadhyay, S.
2017-12-01
In new generation high intensity high energy physics experiments, millions of free streaming high rate data sources are to be readout. Free streaming data with associated time-stamp can only be controlled by thresholds as there is no trigger information available for the readout. Therefore, these readouts are prone to collect large amount of noise and unwanted data. For this reason, these experiments can have output data rate of several orders of magnitude higher than the useful signal data rate. It is therefore necessary to perform online processing of the data to extract useful information from the full data set. Without trigger information, pre-processing on the free streaming data can only be done with time based correlation among the data set. Multiple data sources have different path delays and bandwidth utilizations and therefore the unsorted merged data requires significant computational efforts for real time manifestation of sorting before analysis. Present work reports a new high speed scalable data stream sorting algorithm with its architectural design, verified through Field programmable Gate Array (FPGA) based hardware simulation. Realistic time based simulated data likely to be collected in an high energy physics experiment have been used to study the performance of the algorithm. The proposed algorithm uses parallel read-write blocks with added memory management and zero suppression features to make it efficient for high rate data-streams. This algorithm is best suited for online data streams with deterministic time disorder/unsorting on FPGA like hardware.
Performance evaluation of PCA-based spike sorting algorithms.
Adamos, Dimitrios A; Kosmidis, Efstratios K; Theophilidis, George
2008-09-01
Deciphering the electrical activity of individual neurons from multi-unit noisy recordings is critical for understanding complex neural systems. A widely used spike sorting algorithm is being evaluated for single-electrode nerve trunk recordings. The algorithm is based on principal component analysis (PCA) for spike feature extraction. In the neuroscience literature it is generally assumed that the use of the first two or most commonly three principal components is sufficient. We estimate the optimum PCA-based feature space by evaluating the algorithm's performance on simulated series of action potentials. A number of modifications are made to the open source nev2lkit software to enable systematic investigation of the parameter space. We introduce a new metric to define clustering error considering over-clustering more favorable than under-clustering as proposed by experimentalists for our data. Both the program patch and the metric are available online. Correlated and white Gaussian noise processes are superimposed to account for biological and artificial jitter in the recordings. We report that the employment of more than three principal components is in general beneficial for all noise cases considered. Finally, we apply our results to experimental data and verify that the sorting process with four principal components is in agreement with a panel of electrophysiology experts.
Vignesh, S.; Dinesh Babu, P.; Surya, G.; Dinesh, S.; Marimuthu, P.
2018-02-01
The ultimate goal of all production entities is to select the process parameters that would be of maximum strength, minimum wear and friction. The friction and wear are serious problems in most of the industries which are influenced by the working set of parameters, oxidation characteristics and mechanism involved in formation of wear. The experimental input parameters such as sliding distance, applied load, and temperature are utilized in finding out the optimized solution for achieving the desired output responses such as coefficient of friction, wear rate, and volume loss. The optimization is performed with the help of a novel method, Elitist Non-dominated Sorting Genetic Algorithm (NSGA-II) based on an evolutionary algorithm. The regression equations obtained using Response Surface Methodology (RSM) are used in determining the optimum process parameters. Further, the results achieved through desirability approach in RSM are compared with that of the optimized solution obtained through NSGA-II. The results conclude that proposed evolutionary technique is much effective and faster than the desirability approach.
Spike sorting based upon machine learning algorithms (SOMA).
Horton, P M; Nicol, A U; Kendrick, K M; Feng, J F
2007-02-15
We have developed a spike sorting method, using a combination of various machine learning algorithms, to analyse electrophysiological data and automatically determine the number of sampled neurons from an individual electrode, and discriminate their activities. We discuss extensions to a standard unsupervised learning algorithm (Kohonen), as using a simple application of this technique would only identify a known number of clusters. Our extra techniques automatically identify the number of clusters within the dataset, and their sizes, thereby reducing the chance of misclassification. We also discuss a new pre-processing technique, which transforms the data into a higher dimensional feature space revealing separable clusters. Using principal component analysis (PCA) alone may not achieve this. Our new approach appends the features acquired using PCA with features describing the geometric shapes that constitute a spike waveform. To validate our new spike sorting approach, we have applied it to multi-electrode array datasets acquired from the rat olfactory bulb, and from the sheep infero-temporal cortex, and using simulated data. The SOMA sofware is available at http://www.sussex.ac.uk/Users/pmh20/spikes.
Design of reproducible polarized and non-polarized edge filters using genetic algorithm
International Nuclear Information System (INIS)
Ejigu, Efrem Kebede; Lacquet, B M
2010-01-01
Recent advancement in optical fibre communications technology is partly due to the advancement of optical thin film technology. The advancement of optical thin film technology includes the development of new and existing optical filter design methods. The genetic algorithm is one of the new design methods that show promising results in designing a number of complicated design specifications. It is the finding of this study that the genetic algorithm design method, through its optimization capability, can give more reliable and reproducible designs of any specifications. The design method in this study optimizes the thickness of each layer to get to the best possible solution. Its capability and unavoidable limitations in designing polarized and non-polarized edge filters from absorptive and dispersive materials is well demonstrated. It is also demonstrated that polarized and non-polarized designs from the genetic algorithm are reproducible with great success. This research has accomplished the great task of formulating a computer program using the genetic algorithm in a Matlab environment for the design of a reproducible polarized and non-polarized filters of any sort from any kind of materials
From Genetics to Genetic Algorithms
Indian Academy of Sciences (India)
Genetic algorithms (GAs) are computational optimisation schemes with an ... The algorithms solve optimisation problems ..... Genetic Algorithms in Search, Optimisation and Machine. Learning, Addison-Wesley Publishing Company, Inc. 1989.
Sinha, Snehal K; Kumar, Mithilesh; Guria, Chandan; Kumar, Anup; Banerjee, Chiranjib
2017-10-01
Algal model based multi-objective optimization using elitist non-dominated sorting genetic algorithm with inheritance was carried out for batch cultivation of Dunaliella tertiolecta using NPK-fertilizer. Optimization problems involving two- and three-objective functions were solved simultaneously. The objective functions are: maximization of algae-biomass and lipid productivity with minimization of cultivation time and cost. Time variant light intensity and temperature including NPK-fertilizer, NaCl and NaHCO 3 loadings are the important decision variables. Algal model involving Monod/Andrews adsorption kinetics and Droop model with internal nutrient cell quota was used for optimization studies. Sets of non-dominated (equally good) Pareto optimal solutions were obtained for the problems studied. It was observed that time variant optimal light intensity and temperature trajectories, including optimum NPK fertilizer, NaCl and NaHCO 3 concentration has significant influence to improve biomass and lipid productivity under minimum cultivation time and cost. Proposed optimization studies may be helpful to implement the control strategy in scale-up operation. Copyright © 2017 Elsevier Ltd. All rights reserved.
An Empirical Derivation of the Run Time of the Bubble Sort Algorithm.
Gonzales, Michael G.
1984-01-01
Suggests a moving pictorial tool to help teach principles in the bubble sort algorithm. Develops such a tool applied to an unsorted list of numbers and describes a method to derive the run time of the algorithm. The method can be modified to run the times of various other algorithms. (JN)
Thengumpallil, Sheeba; Germond, Jean-François; Bourhis, Jean; Bochud, François; Moeckli, Raphaël
2016-06-01
To investigate the impact of Toshiba phase- and amplitude-sorting algorithms on the margin strategies for free-breathing lung radiotherapy treatments in the presence of breathing variations. 4D CT of a sphere inside a dynamic thorax phantom was acquired. The 4D CT was reconstructed according to the phase- and amplitude-sorting algorithms. The phantom was moved by reproducing amplitude, frequency, and a mix of amplitude and frequency variations. Artefact analysis was performed for Mid-Ventilation and ITV-based strategies on the images reconstructed by phase- and amplitude-sorting algorithms. The target volume deviation was assessed by comparing the target volume acquired during irregular motion to the volume acquired during regular motion. The amplitude-sorting algorithm shows reduced artefacts for only amplitude variations while the phase-sorting algorithm for only frequency variations. For amplitude and frequency variations, both algorithms perform similarly. Most of the artefacts are blurring and incomplete structures. We found larger artefacts and volume differences for the Mid-Ventilation with respect to the ITV strategy, resulting in a higher relative difference of the surface distortion value which ranges between maximum 14.6% and minimum 4.1%. The amplitude- is superior to the phase-sorting algorithm in the reduction of motion artefacts for amplitude variations while phase-sorting for frequency variations. A proper choice of 4D CT sorting algorithm is important in order to reduce motion artefacts, especially if Mid-Ventilation strategy is used. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.
Automatic Tuning of PID Controller for a 1-D Levitation System Using a Genetic Algorithm
DEFF Research Database (Denmark)
Yang, Zhenyu; Pedersen, Gerulf K.m.
2006-01-01
The automatic PID control design for a onedimensional magnetic levitation system is investigated. The PID controller is automatically tuned using the non-dominated sorting genetic algorithm (NSGA-II) based on a nonlinear system model. The developed controller is digitally implemented and tested...
International Nuclear Information System (INIS)
Yang, Ming-Der; Lin, Min-Der; Lin, Yu-Hao; Tsai, Kang-Ting
2017-01-01
Highlights: • An effective envelope energy performance model (BEM) was developed. • We integrated NSGA-II with the BEM to optimize the green building envelope. • A tradeoff plan of green building design for three conflict objectives was obtained. • The optimal envelope design efficiently reduced the construction cost of green building. - Abstract: To realize the goal of environmental sustainability, improving energy efficiency in buildings is a major priority worldwide. However, the practical design of green building envelopes for energy conservation is a highly complex optimization problem, and architects must make multiobjective decisions. In practice, methods such as multicriteria analyses that entail capitalizing on possibly many (but in nearly any case limited) alternatives are commonly employed. This study investigated the feasibility of applying a multiobjective optimal model on building envelope design (MOPBEM), which involved integrating a building envelope energy performance model with a multiobjective optimizer. The MOPBEM was established to provide a reference for green designs. A nondominated sorting genetic algorithm-II (NSGA-II) was used to achieve a tradeoff design set between three conflicting objectives, namely minimizing the envelope construction cost (ENVCOST), minimizing the envelope energy performance (ENVLOAD), and maximizing the window opening rate (WOPR). A real office building case was designed using the MOPBEM to identify the potential strengths and weaknesses of the proposed MOPBEM. The results showed that a high ENVCOST was expended in simultaneously satisfying the low ENVLOAD and high WOPR. Various designs exhibited obvious cost reductions compared with the original architects' manual design, demonstrating the practicability of the MOPBEM.
Application of genetic algorithm for optimization the safety system of the nuclear reactor
International Nuclear Information System (INIS)
El-Sayed Wahed, M.; Ibrahim, W.Z.; Effat, A.M.
2009-01-01
The purpose of this paper is to present an approach to optimization in which every target is considered as a separate objective to be optimized. Multi-objective optimization is a powerful tool for resolving conflicting objectives in engineering design and numerous other fields. One approach to solve multi-objective optimization problems is the non-dominated sorting genetic algorithm (NSGA). Genetic algorithm (GA) was applied in regarding the choice of the time intervals for the periodic testing of the components of the chimney water injection system (CWIS) of the 22 MW open pool multipurpose reactor (MPR), ETRR-2, at the Egyptian Atomic Energy Authority, has been used as a case study. (authors)
International Nuclear Information System (INIS)
Colavita, A.; Capello, G.
1997-01-01
In this paper we present a novel parallel sorting algorithm, which works through a cascade of elementary sorting units and leads to a scalable architecture. The algorithm's complexity is analyzed and compared with a classical parallel algorithm. It comes out that, although it may be less efficient than classical approaches, the proposed algorithm is highly suited for VLSI implementation for its simplicity and scalability. The paper describes the applications of such device to the asynchronous data acquisition for a gamma-ray telescope. (orig.)
A Computer Environment for Beginners' Learning of Sorting Algorithms: Design and Pilot Evaluation
Kordaki, M.; Miatidis, M.; Kapsampelis, G.
2008-01-01
This paper presents the design, features and pilot evaluation study of a web-based environment--the SORTING environment--for the learning of sorting algorithms by secondary level education students. The design of this environment is based on modeling methodology, taking into account modern constructivist and social theories of learning while at…
Design and Large-Scale Evaluation of Educational Games for Teaching Sorting Algorithms
Battistella, Paulo Eduardo; von Wangenheim, Christiane Gresse; von Wangenheim, Aldo; Martina, Jean Everson
2017-01-01
The teaching of sorting algorithms is an essential topic in undergraduate computing courses. Typically the courses are taught through traditional lectures and exercises involving the implementation of the algorithms. As an alternative, this article presents the design and evaluation of three educational games for teaching Quicksort and Heapsort.…
Krasichkov, A S; Grigoriev, E B; Nifontov, E M; Shapovalov, V V
The paper presents an algorithm of cardio complex classification as part of processing the data of continuous cardiac monitoring. R-wave detection concurrently with cardio complex sorting is discussed. The core of this approach is the use of prior information about. cardio complex forms, segmental structure, and degree of kindness. Results of the sorting algorithm testing are provided.
Multi-objective hierarchical genetic algorithms for multilevel redundancy allocation optimization
Energy Technology Data Exchange (ETDEWEB)
Kumar, Ranjan [Department of Aeronautics and Astronautics, Kyoto University, Yoshida-honmachi, Sakyo-ku, Kyoto 606-8501 (Japan)], E-mail: ranjan.k@ks3.ecs.kyoto-u.ac.jp; Izui, Kazuhiro [Department of Aeronautics and Astronautics, Kyoto University, Yoshida-honmachi, Sakyo-ku, Kyoto 606-8501 (Japan)], E-mail: izui@prec.kyoto-u.ac.jp; Yoshimura, Masataka [Department of Aeronautics and Astronautics, Kyoto University, Yoshida-honmachi, Sakyo-ku, Kyoto 606-8501 (Japan)], E-mail: yoshimura@prec.kyoto-u.ac.jp; Nishiwaki, Shinji [Department of Aeronautics and Astronautics, Kyoto University, Yoshida-honmachi, Sakyo-ku, Kyoto 606-8501 (Japan)], E-mail: shinji@prec.kyoto-u.ac.jp
2009-04-15
Multilevel redundancy allocation optimization problems (MRAOPs) occur frequently when attempting to maximize the system reliability of a hierarchical system, and almost all complex engineering systems are hierarchical. Despite their practical significance, limited research has been done concerning the solving of simple MRAOPs. These problems are not only NP hard but also involve hierarchical design variables. Genetic algorithms (GAs) have been applied in solving MRAOPs, since they are computationally efficient in solving such problems, unlike exact methods, but their applications has been confined to single-objective formulation of MRAOPs. This paper proposes a multi-objective formulation of MRAOPs and a methodology for solving such problems. In this methodology, a hierarchical GA framework for multi-objective optimization is proposed by introducing hierarchical genotype encoding for design variables. In addition, we implement the proposed approach by integrating the hierarchical genotype encoding scheme with two popular multi-objective genetic algorithms (MOGAs)-the strength Pareto evolutionary genetic algorithm (SPEA2) and the non-dominated sorting genetic algorithm (NSGA-II). In the provided numerical examples, the proposed multi-objective hierarchical approach is applied to solve two hierarchical MRAOPs, a 4- and a 3-level problems. The proposed method is compared with a single-objective optimization method that uses a hierarchical genetic algorithm (HGA), also applied to solve the 3- and 4-level problems. The results show that a multi-objective hierarchical GA (MOHGA) that includes elitism and mechanism for diversity preserving performed better than a single-objective GA that only uses elitism, when solving large-scale MRAOPs. Additionally, the experimental results show that the proposed method with NSGA-II outperformed the proposed method with SPEA2 in finding useful Pareto optimal solution sets.
Multi-objective hierarchical genetic algorithms for multilevel redundancy allocation optimization
International Nuclear Information System (INIS)
Kumar, Ranjan; Izui, Kazuhiro; Yoshimura, Masataka; Nishiwaki, Shinji
2009-01-01
Multilevel redundancy allocation optimization problems (MRAOPs) occur frequently when attempting to maximize the system reliability of a hierarchical system, and almost all complex engineering systems are hierarchical. Despite their practical significance, limited research has been done concerning the solving of simple MRAOPs. These problems are not only NP hard but also involve hierarchical design variables. Genetic algorithms (GAs) have been applied in solving MRAOPs, since they are computationally efficient in solving such problems, unlike exact methods, but their applications has been confined to single-objective formulation of MRAOPs. This paper proposes a multi-objective formulation of MRAOPs and a methodology for solving such problems. In this methodology, a hierarchical GA framework for multi-objective optimization is proposed by introducing hierarchical genotype encoding for design variables. In addition, we implement the proposed approach by integrating the hierarchical genotype encoding scheme with two popular multi-objective genetic algorithms (MOGAs)-the strength Pareto evolutionary genetic algorithm (SPEA2) and the non-dominated sorting genetic algorithm (NSGA-II). In the provided numerical examples, the proposed multi-objective hierarchical approach is applied to solve two hierarchical MRAOPs, a 4- and a 3-level problems. The proposed method is compared with a single-objective optimization method that uses a hierarchical genetic algorithm (HGA), also applied to solve the 3- and 4-level problems. The results show that a multi-objective hierarchical GA (MOHGA) that includes elitism and mechanism for diversity preserving performed better than a single-objective GA that only uses elitism, when solving large-scale MRAOPs. Additionally, the experimental results show that the proposed method with NSGA-II outperformed the proposed method with SPEA2 in finding useful Pareto optimal solution sets
Generation of Compliant Mechanisms using Hybrid Genetic Algorithm
Sharma, D.; Deb, K.
2014-10-01
Compliant mechanism is a single piece elastic structure which can deform to perform the assigned task. In this work, compliant mechanisms are evolved using a constraint based bi-objective optimization formulation which requires one user defined parameter ( η). This user defined parameter limits a gap between a desired path and an actual path traced by the compliant mechanism. The non-linear and discrete optimization problems are solved using the hybrid Genetic Algorithm (GA) wherein domain specific initialization, two-dimensional crossover operator and repairing techniques are adopted. A bit-wise local search method is used with elitist non-dominated sorting genetic algorithm to further refine the compliant mechanisms. Parallel computations are performed on the master-slave architecture to reduce the computation time. A parametric study is carried out for η value which suggests a range to evolve topologically different compliant mechanisms. The applied and boundary conditions to the compliant mechanisms are considered the variables that are evolved by the hybrid GA. The post-analysis of results unveils that the complaint mechanisms are always supported at unique location that can evolve the non-dominated solutions.
How many neurons can we see with current spike sorting algorithms?
Pedreira, Carlos; Martinez, Juan; Ison, Matias J; Quian Quiroga, Rodrigo
2012-10-15
Recent studies highlighted the disagreement between the typical number of neurons observed with extracellular recordings and the ones to be expected based on anatomical and physiological considerations. This disagreement has been mainly attributed to the presence of sparsely firing neurons. However, it is also possible that this is due to limitations of the spike sorting algorithms used to process the data. To address this issue, we used realistic simulations of extracellular recordings and found a relatively poor spike sorting performance for simulations containing a large number of neurons. In fact, the number of correctly identified neurons for single-channel recordings showed an asymptotic behavior saturating at about 8-10 units, when up to 20 units were present in the data. This performance was significantly poorer for neurons with low firing rates, as these units were twice more likely to be missed than the ones with high firing rates in simulations containing many neurons. These results uncover one of the main reasons for the relatively low number of neurons found in extracellular recording and also stress the importance of further developments of spike sorting algorithms. Copyright © 2012 Elsevier B.V. All rights reserved.
A fully automated non-external marker 4D-CT sorting algorithm using a serial cine scanning protocol.
Carnes, Greg; Gaede, Stewart; Yu, Edward; Van Dyk, Jake; Battista, Jerry; Lee, Ting-Yim
2009-04-07
Current 4D-CT methods require external marker data to retrospectively sort image data and generate CT volumes. In this work we develop an automated 4D-CT sorting algorithm that performs without the aid of data collected from an external respiratory surrogate. The sorting algorithm requires an overlapping cine scan protocol. The overlapping protocol provides a spatial link between couch positions. Beginning with a starting scan position, images from the adjacent scan position (which spatial match the starting scan position) are selected by maximizing the normalized cross correlation (NCC) of the images at the overlapping slice position. The process was continued by 'daisy chaining' all couch positions using the selected images until an entire 3D volume was produced. The algorithm produced 16 phase volumes to complete a 4D-CT dataset. Additional 4D-CT datasets were also produced using external marker amplitude and phase angle sorting methods. The image quality of the volumes produced by the different methods was quantified by calculating the mean difference of the sorted overlapping slices from adjacent couch positions. The NCC sorted images showed a significant decrease in the mean difference (p < 0.01) for the five patients.
Cache-Aware and Cache-Oblivious Adaptive Sorting
DEFF Research Database (Denmark)
Brodal, Gerth Stølting; Fagerberg, Rolf; Moruz, Gabriel
2005-01-01
Two new adaptive sorting algorithms are introduced which perform an optimal number of comparisons with respect to the number of inversions in the input. The first algorithm is based on a new linear time reduction to (non-adaptive) sorting. The second algorithm is based on a new division protocol...... for the GenericSort algorithm by Estivill-Castro and Wood. From both algorithms we derive I/O-optimal cache-aware and cache-oblivious adaptive sorting algorithms. These are the first I/O-optimal adaptive sorting algorithms....
Pengembangan Algoritma Pengurutan SMS (Scan, Move, And Sort)
Lubis, Denni Aprilsyah
2015-01-01
Sorting has been a profound area for the algorithmic researchers. And many resources are invested to suggest a more working sorting algorithm. For this purpose many existing sorting algorithms were observed in terms of the efficiency of the algorithmic complexity. Efficient sorting is important to optimize the use of other algorithms that require sorted lists to work correctly. sorting has been considered as a fundamental problem in the study of algorithms that due to many reas...
Web page sorting algorithm based on query keyword distance relation
Yang, Han; Cui, Hong Gang; Tang, Hao
2017-08-01
In order to optimize the problem of page sorting, according to the search keywords in the web page in the relationship between the characteristics of the proposed query keywords clustering ideas. And it is converted into the degree of aggregation of the search keywords in the web page. Based on the PageRank algorithm, the clustering degree factor of the query keyword is added to make it possible to participate in the quantitative calculation. This paper proposes an improved algorithm for PageRank based on the distance relation between search keywords. The experimental results show the feasibility and effectiveness of the method.
Dhingra, Sunil; Bhushan, Gian; Dubey, Kashyap Kumar
2014-03-01
The present work studies and identifies the different variables that affect the output parameters involved in a single cylinder direct injection compression ignition (CI) engine using jatropha biodiesel. Response surface methodology based on Central composite design (CCD) is used to design the experiments. Mathematical models are developed for combustion parameters (Brake specific fuel consumption (BSFC) and peak cylinder pressure (Pmax)), performance parameter brake thermal efficiency (BTE) and emission parameters (CO, NO x , unburnt HC and smoke) using regression techniques. These regression equations are further utilized for simultaneous optimization of combustion (BSFC, Pmax), performance (BTE) and emission (CO, NO x , HC, smoke) parameters. As the objective is to maximize BTE and minimize BSFC, Pmax, CO, NO x , HC, smoke, a multiobjective optimization problem is formulated. Nondominated sorting genetic algorithm-II is used in predicting the Pareto optimal sets of solution. Experiments are performed at suitable optimal solutions for predicting the combustion, performance and emission parameters to check the adequacy of the proposed model. The Pareto optimal sets of solution can be used as guidelines for the end users to select optimal combination of engine output and emission parameters depending upon their own requirements.
A model-based spike sorting algorithm for removing correlation artifacts in multi-neuron recordings.
Pillow, Jonathan W; Shlens, Jonathon; Chichilnisky, E J; Simoncelli, Eero P
2013-01-01
We examine the problem of estimating the spike trains of multiple neurons from voltage traces recorded on one or more extracellular electrodes. Traditional spike-sorting methods rely on thresholding or clustering of recorded signals to identify spikes. While these methods can detect a large fraction of the spikes from a recording, they generally fail to identify synchronous or near-synchronous spikes: cases in which multiple spikes overlap. Here we investigate the geometry of failures in traditional sorting algorithms, and document the prevalence of such errors in multi-electrode recordings from primate retina. We then develop a method for multi-neuron spike sorting using a model that explicitly accounts for the superposition of spike waveforms. We model the recorded voltage traces as a linear combination of spike waveforms plus a stochastic background component of correlated Gaussian noise. Combining this measurement model with a Bernoulli prior over binary spike trains yields a posterior distribution for spikes given the recorded data. We introduce a greedy algorithm to maximize this posterior that we call "binary pursuit". The algorithm allows modest variability in spike waveforms and recovers spike times with higher precision than the voltage sampling rate. This method substantially corrects cross-correlation artifacts that arise with conventional methods, and substantially outperforms clustering methods on both real and simulated data. Finally, we develop diagnostic tools that can be used to assess errors in spike sorting in the absence of ground truth.
Foundations of genetic algorithms 1991
1991-01-01
Foundations of Genetic Algorithms 1991 (FOGA 1) discusses the theoretical foundations of genetic algorithms (GA) and classifier systems.This book compiles research papers on selection and convergence, coding and representation, problem hardness, deception, classifier system design, variation and recombination, parallelization, and population divergence. Other topics include the non-uniform Walsh-schema transform; spurious correlations and premature convergence in genetic algorithms; and variable default hierarchy separation in a classifier system. The grammar-based genetic algorithm; condition
A faster 1.375-approximation algorithm for sorting by transpositions.
Cunha, Luís Felipe I; Kowada, Luis Antonio B; Hausen, Rodrigo de A; de Figueiredo, Celina M H
2015-11-01
Sorting by Transpositions is an NP-hard problem for which several polynomial-time approximation algorithms have been developed. Hartman and Shamir (2006) developed a 1.5-approximation [Formula: see text] algorithm, whose running time was improved to O(nlogn) by Feng and Zhu (2007) with a data structure they defined, the permutation tree. Elias and Hartman (2006) developed a 1.375-approximation O(n(2)) algorithm, and Firoz et al. (2011) claimed an improvement to the running time, from O(n(2)) to O(nlogn), by using the permutation tree. We provide counter-examples to the correctness of Firoz et al.'s strategy, showing that it is not possible to reach a component by sufficient extensions using the method proposed by them. In addition, we propose a 1.375-approximation algorithm, modifying Elias and Hartman's approach with the use of permutation trees and achieving O(nlogn) time.
LazySorted: A Lazily, Partially Sorted Python List
Directory of Open Access Journals (Sweden)
Naftali Harris
2015-06-01
Full Text Available LazySorted is a Python C extension implementing a partially and lazily sorted list data structure. It solves a common problem faced by programmers, in which they need just part of a sorted list, like its middle element (the median, but sort the entire list to get it. LazySorted presents them with the abstraction that they are working with a fully sorted list, while actually only sorting the list partially with quicksort partitions to return the requested sub-elements. This enables programmers to use naive "sort first" algorithms but nonetheless attain linear run-times when possible. LazySorted may serve as a drop-in replacement for the built-in sorted function in most cases, and can sometimes achieve run-times more than 7 times faster.
Multi-objective optimal design of sandwich panels using a genetic algorithm
Xu, Xiaomei; Jiang, Yiping; Pueh Lee, Heow
2017-10-01
In this study, an optimization problem concerning sandwich panels is investigated by simultaneously considering the two objectives of minimizing the panel mass and maximizing the sound insulation performance. First of all, the acoustic model of sandwich panels is discussed, which provides a foundation to model the acoustic objective function. Then the optimization problem is formulated as a bi-objective programming model, and a solution algorithm based on the non-dominated sorting genetic algorithm II (NSGA-II) is provided to solve the proposed model. Finally, taking an example of a sandwich panel that is expected to be used as an automotive roof panel, numerical experiments are carried out to verify the effectiveness of the proposed model and solution algorithm. Numerical results demonstrate in detail how the core material, geometric constraints and mechanical constraints impact the optimal designs of sandwich panels.
DEFF Research Database (Denmark)
Henglein, Fritz
2009-01-01
What is a sorting function—not a sorting function for a given ordering relation, but a sorting function with nothing given? Formulating four basic properties of sorting algorithms as defining requirements, we arrive at intrinsic notions of sorting and stable sorting: A function is a sorting...... are derivable without compromising data abstraction. Finally we point out that stable sorting functions as default representations of ordering relations have the advantage of permitting linear-time sorting algorithms; inequality tests forfeit this possibility....... function if and only it is an intrinsically parametric permutation function. It is a stable sorting function if and only if it is an intrinsically stable permutation function. We show that ordering relations can be represented isomorphically as inequality tests, comparators and stable sorting functions...
A lossless one-pass sorting algorithm for symmetric three-dimensional gamma-ray data sets
International Nuclear Information System (INIS)
Brinkman, M.J.; Manatt, D.R.; Becker, J.A.; Henry, E.A.
1992-01-01
An algorithm for three-dimensional sorting and storing of the large data sets expected from the next generation of large gamma-ray detector arrays (i.e., EUROGAM, GAMMASPHERE) is presented. The algorithm allows the storage of realistic data sets on standard mass storage media. A discussion of an efficient implementation of the algorithm is provided with a proposed technique for exploiting its inherently parallel nature. (author). 5 refs., 2 figs
A lossless one-pass sorting algorithm for symmetric three-dimensional gamma-ray data sets
Energy Technology Data Exchange (ETDEWEB)
Brinkman, M J; Manatt, D R; Becker, J A; Henry, E A [Lawrence Livermore National Lab., CA (United States)
1992-08-01
An algorithm for three-dimensional sorting and storing of the large data sets expected from the next generation of large gamma-ray detector arrays (i.e., EUROGAM, GAMMASPHERE) is presented. The algorithm allows the storage of realistic data sets on standard mass storage media. A discussion of an efficient implementation of the algorithm is provided with a proposed technique for exploiting its inherently parallel nature. (author). 5 refs., 2 figs.
Mahmoud, Hosam M
2011-01-01
A cutting-edge look at the emerging distributional theory of sorting Research on distributions associated with sorting algorithms has grown dramatically over the last few decades, spawning many exact and limiting distributions of complexity measures for many sorting algorithms. Yet much of this information has been scattered in disparate and highly specialized sources throughout the literature. In Sorting: A Distribution Theory, leading authority Hosam Mahmoud compiles, consolidates, and clarifies the large volume of available research, providing a much-needed, comprehensive treatment of the
International Nuclear Information System (INIS)
Chen, Zhihuan; Yuan, Xiaohui; Ji, Bin; Wang, Pengtao; Tian, Hao
2014-01-01
Highlights: • Multi-objective optimization based fractional order controller is designed for HTRS. • NSGAII is improved by iterative chaotic map with infinite collapses (ICMIC) operator. • ISE and ITSE are as chosen as objective functions in tuning parameters of HTRS. • FOPID controller outperforms the PID controller under various running conditions. • Trade-off between speed of reference tracking and damping of oscillation are shown. - Abstract: Fractional-order PID (FOPID) controller is a generalization of traditional PID controller using fractional calculus. Compared to the traditional PID controller, in FOPID controller, the order of derivative portion and integral portion is not integer, which provides more flexibility in achieving control objectives. Design stage of such an FOPID controller consists of determining five parameters, i.e. proportional, integral and derivative gains {Kp, Ki, Kd}, and extra integration and differentiation orders {λ,μ}, which has a large difference comparing with the conventional PID tuning rules, thus a suitable optimization algorithm is essential to the parameters tuning of FOPID controller. This paper focuses on the design of the FOPID controller using chaotic non-dominated sorting genetic algorithm II (NSGAII) for hydraulic turbine regulating system (HTRS). The parameters chosen of the FOPID controller is formulated as a multi-objective optimization problem, in which the objective functions are composed by the integral of the squared error (ISE) and integral of the time multiplied squared error (ITSE). The chaotic NSGAII algorithm, which is an incorporation of chaotic behaviors into NSGAII, is used as the optimizer to search true Pareto-front of the FOPID controller and designers can implement each of them based on objective functions priority. The designed chaotic NSGAII based FOPID controller procedure is applied to a HTRS system. A comparison study between the optimum integer order PID controller and optimum
An algorithm for intelligent sorting of CT-related dose parameters
Cook, Tessa S.; Zimmerman, Stefan L.; Steingal, Scott; Boonn, William W.; Kim, Woojin
2011-03-01
Imaging centers nationwide are seeking innovative means to record and monitor CT-related radiation dose in light of multiple instances of patient over-exposure to medical radiation. As a solution, we have developed RADIANCE, an automated pipeline for extraction, archival and reporting of CT-related dose parameters. Estimation of whole-body effective dose from CT dose-length product (DLP)-an indirect estimate of radiation dose-requires anatomy-specific conversion factors that cannot be applied to total DLP, but instead necessitate individual anatomy-based DLPs. A challenge exists because the total DLP reported on a dose sheet often includes multiple separate examinations (e.g., chest CT followed by abdominopelvic CT). Furthermore, the individual reported series DLPs may not be clearly or consistently labeled. For example, Arterial could refer to the arterial phase of the triple liver CT or the arterial phase of a CT angiogram. To address this problem, we have designed an intelligent algorithm to parse dose sheets for multi-series CT examinations and correctly separate the total DLP into its anatomic components. The algorithm uses information from the departmental PACS to determine how many distinct CT examinations were concurrently performed. Then, it matches the number of distinct accession numbers to the series that were acquired, and anatomically matches individual series DLPs to their appropriate CT examinations. This algorithm allows for more accurate dose analytics, but there remain instances where automatic sorting is not feasible. To ultimately improve radiology patient care, we must standardize series names and exam names to unequivocally sort exams by anatomy and correctly estimate whole-body effective dose.
An algorithm for intelligent sorting of CT-related dose parameters.
Cook, Tessa S; Zimmerman, Stefan L; Steingall, Scott R; Boonn, William W; Kim, Woojin
2012-02-01
Imaging centers nationwide are seeking innovative means to record and monitor computed tomography (CT)-related radiation dose in light of multiple instances of patient overexposure to medical radiation. As a solution, we have developed RADIANCE, an automated pipeline for extraction, archival, and reporting of CT-related dose parameters. Estimation of whole-body effective dose from CT dose length product (DLP)--an indirect estimate of radiation dose--requires anatomy-specific conversion factors that cannot be applied to total DLP, but instead necessitate individual anatomy-based DLPs. A challenge exists because the total DLP reported on a dose sheet often includes multiple separate examinations (e.g., chest CT followed by abdominopelvic CT). Furthermore, the individual reported series DLPs may not be clearly or consistently labeled. For example, "arterial" could refer to the arterial phase of the triple liver CT or the arterial phase of a CT angiogram. To address this problem, we have designed an intelligent algorithm to parse dose sheets for multi-series CT examinations and correctly separate the total DLP into its anatomic components. The algorithm uses information from the departmental PACS to determine how many distinct CT examinations were concurrently performed. Then, it matches the number of distinct accession numbers to the series that were acquired and anatomically matches individual series DLPs to their appropriate CT examinations. This algorithm allows for more accurate dose analytics, but there remain instances where automatic sorting is not feasible. To ultimately improve radiology patient care, we must standardize series names and exam names to unequivocally sort exams by anatomy and correctly estimate whole-body effective dose.
Kim, Seonah; Orendt, Anita M; Ferraro, Marta B; Facelli, Julio C
2009-10-01
This article describes the application of our distributed computing framework for crystal structure prediction (CSP) the modified genetic algorithms for crystal and cluster prediction (MGAC), to predict the crystal structure of flexible molecules using the general Amber force field (GAFF) and the CHARMM program. The MGAC distributed computing framework includes a series of tightly integrated computer programs for generating the molecule's force field, sampling crystal structures using a distributed parallel genetic algorithm and local energy minimization of the structures followed by the classifying, sorting, and archiving of the most relevant structures. Our results indicate that the method can consistently find the experimentally known crystal structures of flexible molecules, but the number of missing structures and poor ranking observed in some crystals show the need for further improvement of the potential. Copyright 2009 Wiley Periodicals, Inc.
A Low-Tech, Hands-On Approach To Teaching Sorting Algorithms to Working Students.
Dios, R.; Geller, J.
1998-01-01
Focuses on identifying the educational effects of "activity oriented" instructional techniques. Examines which instructional methods produce enhanced learning and comprehension. Discusses the problem of learning "sorting algorithms," a major topic in every Computer Science curriculum. Presents a low-tech, hands-on teaching method for sorting…
Niayifar, A.; Perona, P.
2015-12-01
River impoundment by dams is known to strongly affect the natural flow regime and in turn the river attributes and the related ecosystem biodiversity. Making hydropower sustainable implies to seek for innovative operational policies able to generate dynamic environmental flows while maintaining economic efficiency. For dammed systems, we build the ecological and economical efficiency plot for non-proportional flow redistribution operational rules compared to minimal flow operational. As for the case of small hydropower plants (e.g., see the companion paper by Gorla et al., this session), we use a four parameters Fermi-Dirac statistical distribution to mathematically formulate non-proportional redistribution rules. These rules allocate a fraction of water to the riverine environment depending on current reservoir inflows and storage. Riverine ecological benefits associated to dynamic environmental flows are computed by integrating the Weighted Usable Area (WUA) for fishes with Richter's hydrological indicators. Then, we apply nondominated sorting genetic algorithm II (NSGA-II) to an ensemble of non-proportional and minimal flow redistribution rules in order to generate the Pareto frontier showing the system performances in the ecologic and economic space. This fast and elitist multiobjective optimization method is eventually applied to a case study. It is found that non-proportional dynamic flow releases ensure maximal power production on the one hand, while conciliating ecological sustainability on the other hand. Much of the improvement in the environmental indicator is seen to arise from a better use of the reservoir storage dynamics, which allows to capture, and laminate flood events while recovering part of them for energy production. In conclusion, adopting such new operational policies would unravel a spectrum of globally-efficient performances of the dammed system when compared with those resulting from policies based on constant minimum flow releases.
Genetic algorithms and fuzzy multiobjective optimization
Sakawa, Masatoshi
2002-01-01
Since the introduction of genetic algorithms in the 1970s, an enormous number of articles together with several significant monographs and books have been published on this methodology. As a result, genetic algorithms have made a major contribution to optimization, adaptation, and learning in a wide variety of unexpected fields. Over the years, many excellent books in genetic algorithm optimization have been published; however, they focus mainly on single-objective discrete or other hard optimization problems under certainty. There appears to be no book that is designed to present genetic algorithms for solving not only single-objective but also fuzzy and multiobjective optimization problems in a unified way. Genetic Algorithms And Fuzzy Multiobjective Optimization introduces the latest advances in the field of genetic algorithm optimization for 0-1 programming, integer programming, nonconvex programming, and job-shop scheduling problems under multiobjectiveness and fuzziness. In addition, the book treats a w...
Streicher, Jeffrey W; McEntee, Jay P; Drzich, Laura C; Card, Daren C; Schield, Drew R; Smart, Utpal; Parkinson, Christopher L; Jezkova, Tereza; Smith, Eric N; Castoe, Todd A
2016-07-01
Strong spatial sorting of genetic variation in contiguous populations is often explained by local adaptation or secondary contact following allopatric divergence. A third explanation, spatial sorting by stochastic effects of range expansion, has been considered less often though theoretical models suggest it should be widespread, if ephemeral. In a study designed to delimit species within a clade of venomous coralsnakes, we identified an unusual pattern within the Texas coral snake (Micrurus tener): strong spatial sorting of divergent mitochondrial (mtDNA) lineages over a portion of its range, but weak sorting of these lineages elsewhere. We tested three alternative hypotheses to explain this pattern-local adaptation, secondary contact following allopatric divergence, and range expansion. Collectively, near panmixia of nuclear DNA, the signal of range expansion associated sampling drift, expansion origins in the Gulf Coast of Mexico, and species distribution modeling suggest that the spatial sorting of divergent mtDNA lineages within M. tener has resulted from genetic surfing of standing mtDNA variation-not local adaptation or allopatric divergence. Our findings highlight the potential for the stochastic effects of recent range expansion to mislead estimations of population divergence made from mtDNA, which may be exacerbated in systems with low vagility, ancestral mtDNA polymorphism, and male-biased dispersal. © 2016 The Author(s).
Dragas, Jelena; Jackel, David; Hierlemann, Andreas; Franke, Felix
2015-03-01
Reliable real-time low-latency spike sorting with large data throughput is essential for studies of neural network dynamics and for brain-machine interfaces (BMIs), in which the stimulation of neural networks is based on the networks' most recent activity. However, the majority of existing multi-electrode spike-sorting algorithms are unsuited for processing high quantities of simultaneously recorded data. Recording from large neuronal networks using large high-density electrode sets (thousands of electrodes) imposes high demands on the data-processing hardware regarding computational complexity and data transmission bandwidth; this, in turn, entails demanding requirements in terms of chip area, memory resources and processing latency. This paper presents computational complexity optimization techniques, which facilitate the use of spike-sorting algorithms in large multi-electrode-based recording systems. The techniques are then applied to a previously published algorithm, on its own, unsuited for large electrode set recordings. Further, a real-time low-latency high-performance VLSI hardware architecture of the modified algorithm is presented, featuring a folded structure capable of processing the activity of hundreds of neurons simultaneously. The hardware is reconfigurable “on-the-fly” and adaptable to the nonstationarities of neuronal recordings. By transmitting exclusively spike time stamps and/or spike waveforms, its real-time processing offers the possibility of data bandwidth and data storage reduction.
Linn, S
One of the more often used measures of multiple injuries is the injury severity score (ISS). Determination of the ISS is based on the abbreviated injury scale (AIS). This paper suggests a new algorithm to sort the AISs for each case and calculate ISS. The program uses unsorted abbreviated injury scale (AIS) levels for each case and rearranges them in descending order. The first three sorted AISs representing the three most severe injuries of a person are then used to calculate injury severity score (ISS). This algorithm should be useful for analyses of clusters of injuries especially when more patients have multiple injuries.
The Formation of Optimal Portfolio of Mutual Shares Funds using Multi-Objective Genetic Algorithm
Directory of Open Access Journals (Sweden)
Yandra Arkeman
2013-09-01
Full Text Available Investments in financial assets have become a trend in the globalization era, especially the investment in mutual fund shares. Investors who want to invest in stock mutual funds can set up an investment portfolio in order to generate a minimal risk and maximum return. In this study the authors used the Multi-Objective Genetic Algorithm Non-dominated Sorting II (MOGA NSGA-II technique with the Markowitz portfolio principle to find the best portfolio from several mutual funds. The data used are 10 company stock mutual funds with a period of 12 months, 24 months and 36 months. The genetic algorithm parameters used are crossover probability of 0.65, mutation probability of 0.05, Generation 400 and a population numbering 20 individuals. The study produced a combination of the best portfolios for the period of 24 months with a computing time of 63,289 seconds.
Regalia, Giulia; Coelli, Stefania; Biffi, Emilia; Ferrigno, Giancarlo; Pedrocchi, Alessandra
2016-01-01
Neuronal spike sorting algorithms are designed to retrieve neuronal network activity on a single-cell level from extracellular multiunit recordings with Microelectrode Arrays (MEAs). In typical analysis of MEA data, one spike sorting algorithm is applied indiscriminately to all electrode signals. However, this approach neglects the dependency of algorithms' performances on the neuronal signals properties at each channel, which require data-centric methods. Moreover, sorting is commonly performed off-line, which is time and memory consuming and prevents researchers from having an immediate glance at ongoing experiments. The aim of this work is to provide a versatile framework to support the evaluation and comparison of different spike classification algorithms suitable for both off-line and on-line analysis. We incorporated different spike sorting "building blocks" into a Matlab-based software, including 4 feature extraction methods, 3 feature clustering methods, and 1 template matching classifier. The framework was validated by applying different algorithms on simulated and real signals from neuronal cultures coupled to MEAs. Moreover, the system has been proven effective in running on-line analysis on a standard desktop computer, after the selection of the most suitable sorting methods. This work provides a useful and versatile instrument for a supported comparison of different options for spike sorting towards more accurate off-line and on-line MEA data analysis.
Problem solving with genetic algorithms and Splicer
Bayer, Steven E.; Wang, Lui
1991-01-01
Genetic algorithms are highly parallel, adaptive search procedures (i.e., problem-solving methods) loosely based on the processes of population genetics and Darwinian survival of the fittest. Genetic algorithms have proven useful in domains where other optimization techniques perform poorly. The main purpose of the paper is to discuss a NASA-sponsored software development project to develop a general-purpose tool for using genetic algorithms. The tool, called Splicer, can be used to solve a wide variety of optimization problems and is currently available from NASA and COSMIC. This discussion is preceded by an introduction to basic genetic algorithm concepts and a discussion of genetic algorithm applications.
An investigation of genetic algorithms
International Nuclear Information System (INIS)
Douglas, S.R.
1995-04-01
Genetic algorithms mimic biological evolution by natural selection in their search for better individuals within a changing population. they can be used as efficient optimizers. This report discusses the developing field of genetic algorithms. It gives a simple example of the search process and introduces the concept of schema. It also discusses modifications to the basic genetic algorithm that result in species and niche formation, in machine learning and artificial evolution of computer programs, and in the streamlining of human-computer interaction. (author). 3 refs., 1 tab., 2 figs
Data Sorting Using Graphics Processing Units
Directory of Open Access Journals (Sweden)
M. J. Mišić
2012-06-01
Full Text Available Graphics processing units (GPUs have been increasingly used for general-purpose computation in recent years. The GPU accelerated applications are found in both scientific and commercial domains. Sorting is considered as one of the very important operations in many applications, so its efficient implementation is essential for the overall application performance. This paper represents an effort to analyze and evaluate the implementations of the representative sorting algorithms on the graphics processing units. Three sorting algorithms (Quicksort, Merge sort, and Radix sort were evaluated on the Compute Unified Device Architecture (CUDA platform that is used to execute applications on NVIDIA graphics processing units. Algorithms were tested and evaluated using an automated test environment with input datasets of different characteristics. Finally, the results of this analysis are briefly discussed.
Shojaeefard, Mohammad Hassan; Khalkhali, Abolfazl; Faghihian, Hamed; Dahmardeh, Masoud
2018-03-01
Unlike conventional approaches where optimization is performed on a unique component of a specific product, optimum design of a set of components for employing in a product family can cause significant reduction in costs. Increasing commonality and performance of the product platform simultaneously is a multi-objective optimization problem (MOP). Several optimization methods are reported to solve these MOPs. However, what is less discussed is how to find the trade-off points among the obtained non-dominated optimum points. This article investigates the optimal design of a product family using non-dominated sorting genetic algorithm II (NSGA-II) and proposes the employment of technique for order of preference by similarity to ideal solution (TOPSIS) method to find the trade-off points among the obtained non-dominated results while compromising all objective functions together. A case study for a family of suspension systems is presented, considering performance and commonality. The results indicate the effectiveness of the proposed method to obtain the trade-off points with the best possible performance while maximizing the common parts.
A graph-Laplacian-based feature extraction algorithm for neural spike sorting.
Ghanbari, Yasser; Spence, Larry; Papamichalis, Panos
2009-01-01
Analysis of extracellular neural spike recordings is highly dependent upon the accuracy of neural waveform classification, commonly referred to as spike sorting. Feature extraction is an important stage of this process because it can limit the quality of clustering which is performed in the feature space. This paper proposes a new feature extraction method (which we call Graph Laplacian Features, GLF) based on minimizing the graph Laplacian and maximizing the weighted variance. The algorithm is compared with Principal Components Analysis (PCA, the most commonly-used feature extraction method) using simulated neural data. The results show that the proposed algorithm produces more compact and well-separated clusters compared to PCA. As an added benefit, tentative cluster centers are output which can be used to initialize a subsequent clustering stage.
Opposition-Based Memetic Algorithm and Hybrid Approach for Sorting Permutations by Reversals.
Soncco-Álvarez, José Luis; Muñoz, Daniel M; Ayala-Rincón, Mauricio
2018-02-21
Sorting unsigned permutations by reversals is a difficult problem; indeed, it was proved to be NP-hard by Caprara (1997). Because of its high complexity, many approximation algorithms to compute the minimal reversal distance were proposed until reaching the nowadays best-known theoretical ratio of 1.375. In this article, two memetic algorithms to compute the reversal distance are proposed. The first one uses the technique of opposition-based learning leading to an opposition-based memetic algorithm; the second one improves the previous algorithm by applying the heuristic of two breakpoint elimination leading to a hybrid approach. Several experiments were performed with one-hundred randomly generated permutations, single benchmark permutations, and biological permutations. Results of the experiments showed that the proposed OBMA and Hybrid-OBMA algorithms achieve the best results for practical cases, that is, for permutations of length up to 120. Also, Hybrid-OBMA showed to improve the results of OBMA for permutations greater than or equal to 60. The applicability of our proposed algorithms was checked processing permutations based on biological data, in which case OBMA gave the best average results for all instances.
Where genetic algorithms excel.
Baum, E B; Boneh, D; Garrett, C
2001-01-01
We analyze the performance of a genetic algorithm (GA) we call Culling, and a variety of other algorithms, on a problem we refer to as the Additive Search Problem (ASP). We show that the problem of learning the Ising perceptron is reducible to a noisy version of ASP. Noisy ASP is the first problem we are aware of where a genetic-type algorithm bests all known competitors. We generalize ASP to k-ASP to study whether GAs will achieve "implicit parallelism" in a problem with many more schemata. GAs fail to achieve this implicit parallelism, but we describe an algorithm we call Explicitly Parallel Search that succeeds. We also compute the optimal culling point for selective breeding, which turns out to be independent of the fitness function or the population distribution. We also analyze a mean field theoretic algorithm performing similarly to Culling on many problems. These results provide insight into when and how GAs can beat competing methods.
A Preliminary Study of MSD-First Radix-Sorting Methed
小田, 哲久
1984-01-01
Many kinds of sorting algorithms have been developed from the age of Punched Card System. Nowadays, any sorting algorithm can be called either (1) internal sorting methed or (2) external sorting method. Internal sorting method is used only when the number of records to be sorted (N) is not so large for the internal memory of the computer system. Larger memory space has become available with the aid of semiconductor technology. Therefore, it might be desired to develop a new internal sorting m...
Data parallel sorting for particle simulation
Dagum, Leonardo
1992-01-01
Sorting on a parallel architecture is a communications intensive event which can incur a high penalty in applications where it is required. In the case of particle simulation, only integer sorting is necessary, and sequential implementations easily attain the minimum performance bound of O (N) for N particles. Parallel implementations, however, have to cope with the parallel sorting problem which, in addition to incurring a heavy communications cost, can make the minimun performance bound difficult to attain. This paper demonstrates how the sorting problem in a particle simulation can be reduced to a merging problem, and describes an efficient data parallel algorithm to solve this merging problem in a particle simulation. The new algorithm is shown to be optimal under conditions usual for particle simulation, and its fieldwise implementation on the Connection Machine is analyzed in detail. The new algorithm is about four times faster than a fieldwise implementation of radix sort on the Connection Machine.
Genetic algorithms applied to nuclear reactor design optimization
International Nuclear Information System (INIS)
Pereira, C.M.N.A.; Schirru, R.; Martinez, A.S.
2000-01-01
A genetic algorithm is a powerful search technique that simulates natural evolution in order to fit a population of computational structures to the solution of an optimization problem. This technique presents several advantages over classical ones such as linear programming based techniques, often used in nuclear engineering optimization problems. However, genetic algorithms demand some extra computational cost. Nowadays, due to the fast computers available, the use of genetic algorithms has increased and its practical application has become a reality. In nuclear engineering there are many difficult optimization problems related to nuclear reactor design. Genetic algorithm is a suitable technique to face such kind of problems. This chapter presents applications of genetic algorithms for nuclear reactor core design optimization. A genetic algorithm has been designed to optimize the nuclear reactor cell parameters, such as array pitch, isotopic enrichment, dimensions and cells materials. Some advantages of this genetic algorithm implementation over a classical method based on linear programming are revealed through the application of both techniques to a simple optimization problem. In order to emphasize the suitability of genetic algorithms for design optimization, the technique was successfully applied to a more complex problem, where the classical method is not suitable. Results and comments about the applications are also presented. (orig.)
Optimal hydrogenerator governor tuning with a genetic algorithm
International Nuclear Information System (INIS)
Lansberry, J.E.; Wozniak, L.; Goldberg, D.E.
1992-01-01
Many techniques exist for developing optimal controllers. This paper investigates genetic algorithms as a means of finding optimal solutions over a parameter space. In particular, the genetic algorithm is applied to optimal tuning of a governor for a hydrogenerator plant. Analog and digital simulation methods are compared for use in conjunction with the genetic algorithm optimization process. It is shown that analog plant simulation provides advantages in speed over digital plant simulation. This speed advantage makes application of the genetic algorithm in an actual plant environment feasible. Furthermore, the genetic algorithm is shown to possess the ability to reject plant noise and other system anomalies in its search for optimizing solutions
International Nuclear Information System (INIS)
Genderen, J v; Marghany, M
2014-01-01
The paper focusses on three-dimensional (3-D) coastline deformation using interferometric synthetic aperture radar data(InSAR). Conventional InSAR procedures were implemented on three repeat passes of ENVISAT ASAR data. Furthermore, the three-dimensional sorting reliabilities algorithm (3D-SRA) were implemented with the phase unwrapping technique. Subsequently, the 3D-SRA was used to eliminate the phase decorrelation impact from the interferograms. The study showed that the performance of the InSAR method using the 3D-SRA algorithm, is better than the conventional InSAR procedure. In conclusion, the integration of the 3D-SRA, together with phase unwrapping, can produce accurate 3-D coastline deformation information
The Container Problem in Bubble-Sort Graphs
Suzuki, Yasuto; Kaneko, Keiichi
Bubble-sort graphs are variants of Cayley graphs. A bubble-sort graph is suitable as a topology for massively parallel systems because of its simple and regular structure. Therefore, in this study, we focus on n-bubble-sort graphs and propose an algorithm to obtain n-1 disjoint paths between two arbitrary nodes in time bounded by a polynomial in n, the degree of the graph plus one. We estimate the time complexity of the algorithm and the sum of the path lengths after proving the correctness of the algorithm. In addition, we report the results of computer experiments evaluating the average performance of the algorithm.
Wang, Dengfeng; Cai, Kefang
2018-04-01
This article presents a hybrid method combining a modified non-dominated sorting genetic algorithm (MNSGA-II) with grey relational analysis (GRA) to improve the static-dynamic performance of a body-in-white (BIW). First, an implicit parametric model of the BIW was built using SFE-CONCEPT software, and then the validity of the implicit parametric model was verified by physical testing. Eight shape design variables were defined for BIW beam structures based on the implicit parametric technology. Subsequently, MNSGA-II was used to determine the optimal combination of the design parameters that can improve the bending stiffness, torsion stiffness and low-order natural frequencies of the BIW without considerable increase in the mass. A set of non-dominated solutions was then obtained in the multi-objective optimization design. Finally, the grey entropy theory and GRA were applied to rank all non-dominated solutions from best to worst to determine the best trade-off solution. The comparison between the GRA and the technique for order of preference by similarity to ideal solution (TOPSIS) illustrated the reliability and rationality of GRA. Moreover, the effectiveness of the hybrid method was verified by the optimal results such that the bending stiffness, torsion stiffness, first order bending and first order torsion natural frequency were improved by 5.46%, 9.30%, 7.32% and 5.73%, respectively, with the mass of the BIW increasing by 1.30%.
An Unsupervised Online Spike-Sorting Framework.
Knieling, Simeon; Sridharan, Kousik S; Belardinelli, Paolo; Naros, Georgios; Weiss, Daniel; Mormann, Florian; Gharabaghi, Alireza
2016-08-01
Extracellular neuronal microelectrode recordings can include action potentials from multiple neurons. To separate spikes from different neurons, they can be sorted according to their shape, a procedure referred to as spike-sorting. Several algorithms have been reported to solve this task. However, when clustering outcomes are unsatisfactory, most of them are difficult to adjust to achieve the desired results. We present an online spike-sorting framework that uses feature normalization and weighting to maximize the distinctiveness between different spike shapes. Furthermore, multiple criteria are applied to either facilitate or prevent cluster fusion, thereby enabling experimenters to fine-tune the sorting process. We compare our method to established unsupervised offline (Wave_Clus (WC)) and online (OSort (OS)) algorithms by examining their performance in sorting various test datasets using two different scoring systems (AMI and the Adamos metric). Furthermore, we evaluate sorting capabilities on intra-operative recordings using established quality metrics. Compared to WC and OS, our algorithm achieved comparable or higher scores on average and produced more convincing sorting results for intra-operative datasets. Thus, the presented framework is suitable for both online and offline analysis and could substantially improve the quality of microelectrode-based data evaluation for research and clinical application.
A New Efficient Algorithm for the All Sorting Reversals Problem with No Bad Components.
Wang, Biing-Feng
2016-01-01
The problem of finding all reversals that take a permutation one step closer to a target permutation is called the all sorting reversals problem (the ASR problem). For this problem, Siepel had an O(n (3))-time algorithm. Most complications of his algorithm stem from some peculiar structures called bad components. Since bad components are very rare in both real and simulated data, it is practical to study the ASR problem with no bad components. For the ASR problem with no bad components, Swenson et al. gave an O (n(2))-time algorithm. Very recently, Swenson found that their algorithm does not always work. In this paper, a new algorithm is presented for the ASR problem with no bad components. The time complexity is O(n(2)) in the worst case and is linear in the size of input and output in practice.
Sorting signed permutations by inversions in O(nlogn) time.
Swenson, Krister M; Rajan, Vaibhav; Lin, Yu; Moret, Bernard M E
2010-03-01
The study of genomic inversions (or reversals) has been a mainstay of computational genomics for nearly 20 years. After the initial breakthrough of Hannenhalli and Pevzner, who gave the first polynomial-time algorithm for sorting signed permutations by inversions, improved algorithms have been designed, culminating with an optimal linear-time algorithm for computing the inversion distance and a subquadratic algorithm for providing a shortest sequence of inversions--also known as sorting by inversions. Remaining open was the question of whether sorting by inversions could be done in O(nlogn) time. In this article, we present a qualified answer to this question, by providing two new sorting algorithms, a simple and fast randomized algorithm and a deterministic refinement. The deterministic algorithm runs in time O(nlogn + kn), where k is a data-dependent parameter. We provide the results of extensive experiments showing that both the average and the standard deviation for k are small constants, independent of the size of the permutation. We conclude (but do not prove) that almost all signed permutations can be sorted by inversions in O(nlogn) time.
Yu, Shuzhi; Hao, Fanchang; Leong, Hon Wai
2016-02-01
We consider the problem of sorting signed permutations by reversals, transpositions, transreversals, and block-interchanges. The problem arises in the study of species evolution via large-scale genome rearrangement operations. Recently, Hao et al. gave a 2-approximation scheme called genome sorting by bridges (GSB) for solving this problem. Their result extended and unified the results of (i) He and Chen - a 2-approximation algorithm allowing reversals, transpositions, and block-interchanges (by also allowing transversals) and (ii) Hartman and Sharan - a 1.5-approximation algorithm allowing reversals, transpositions, and transversals (by also allowing block-interchanges). The GSB result is based on introduction of three bridge structures in the breakpoint graph, the L-bridge, T-bridge, and X-bridge that models goodreversal, transposition/transreversal, and block-interchange, respectively. However, the paper by Hao et al. focused on proving the 2-approximation GSB scheme and only mention a straightforward [Formula: see text] algorithm. In this paper, we give an [Formula: see text] algorithm for implementing the GSB scheme. The key idea behind our faster GSB algorithm is to represent cycles in the breakpoint graph by their canonical sequences, which greatly simplifies the search for these bridge structures. We also give some comparison results (running time and computed distances) against the original GSB implementation.
Application of radix sorting in high energy physics experiment
International Nuclear Information System (INIS)
Chen Xuan; Gu Minhao; Zhu Kejun
2012-01-01
In the high energy physics experiments, there are always requirements to sort the large scale of experiment data. To meet the demand, this paper introduces one radix sorting algorithms, whose sub-sort is counting sorting and time complex is O (n), based on the characteristic of high energy physics experiment data that is marked by time stamp. This paper gives the description, analysis, implementation and experimental result of the sorting algorithms. (authors)
Sorting and selection in posets
DEFF Research Database (Denmark)
Daskalakis, Constantinos; Karp, Richard M.; Mossel, Elchanan
2011-01-01
from two decades ago by Faigle and Turán. In particular, we present the first algorithm that sorts a width-$w$ poset of size $n$ with query complexity $O(n(w+\\log n))$ and prove that this query complexity is asymptotically optimal. We also describe a variant of Mergesort with query complexity $O......(wn\\log\\frac{n}{w})$ and total complexity $O(w^{2}n\\log\\frac{n}{w})$; an algorithm with the same query complexity was given by Faigle and Turán, but no efficient implementation of that algorithm is known. Both our sorting algorithms can be applied with negligible overhead to the more general problem of reconstructing transitive......Classical problems of sorting and searching assume an underlying linear ordering of the objects being compared. In this paper, we study these problems in the context of partially ordered sets, in which some pairs of objects are incomparable. This generalization is interesting from a combinatorial...
Boolean Queries Optimization by Genetic Algorithms
Czech Academy of Sciences Publication Activity Database
Húsek, Dušan; Owais, S.S.J.; Krömer, P.; Snášel, Václav
2005-01-01
Roč. 15, - (2005), s. 395-409 ISSN 1210-0552 R&D Projects: GA AV ČR 1ET100300414 Institutional research plan: CEZ:AV0Z10300504 Keywords : evolutionary algorithms * genetic algorithms * genetic programming * information retrieval * Boolean query Subject RIV: BB - Applied Statistics, Operational Research
Wang, Jiali; Byrne, James; Franquiz, Juan; McGoron, Anthony
2007-08-01
develop and validate a PET sorting algorithm based on the respiratory amplitude to correct for abnormal respiratory cycles. using the 4D NCAT phantom model, 3D PET images were simulated in lung and other structures at different times within a respiratory cycle and noise was added. To validate the amplitude binning algorithm, NCAT phantom was used to simulate one case of five different respiratory periods and another case of five respiratory periods alone with five respiratory amplitudes. Comparison was performed for gated and un-gated images and for the new amplitude binning algorithm with the time binning algorithm by calculating the mean number of counts in the ROI (region of interest). an average of 8.87+/-5.10% improvement was reported for total 16 tumors with different tumor sizes and different T/B (tumor to background) ratios using the new sorting algorithm. As both the T/B ratio and tumor size decreases, image degradation due to respiration increases. The greater benefit for smaller diameter tumor and lower T/B ratio indicates a potential improvement in detecting more problematic tumors.
Learning Intelligent Genetic Algorithms Using Japanese Nonograms
Tsai, Jinn-Tsong; Chou, Ping-Yi; Fang, Jia-Cen
2012-01-01
An intelligent genetic algorithm (IGA) is proposed to solve Japanese nonograms and is used as a method in a university course to learn evolutionary algorithms. The IGA combines the global exploration capabilities of a canonical genetic algorithm (CGA) with effective condensed encoding, improved fitness function, and modified crossover and…
Cognitive radio resource allocation based on coupled chaotic genetic algorithm
International Nuclear Information System (INIS)
Zu Yun-Xiao; Zhou Jie; Zeng Chang-Chang
2010-01-01
A coupled chaotic genetic algorithm for cognitive radio resource allocation which is based on genetic algorithm and coupled Logistic map is proposed. A fitness function for cognitive radio resource allocation is provided. Simulations are conducted for cognitive radio resource allocation by using the coupled chaotic genetic algorithm, simple genetic algorithm and dynamic allocation algorithm respectively. The simulation results show that, compared with simple genetic and dynamic allocation algorithm, coupled chaotic genetic algorithm reduces the total transmission power and bit error rate in cognitive radio system, and has faster convergence speed
Recent progress in multi-electrode spike sorting methods.
Lefebvre, Baptiste; Yger, Pierre; Marre, Olivier
2016-11-01
In recent years, arrays of extracellular electrodes have been developed and manufactured to record simultaneously from hundreds of electrodes packed with a high density. These recordings should allow neuroscientists to reconstruct the individual activity of the neurons spiking in the vicinity of these electrodes, with the help of signal processing algorithms. Algorithms need to solve a source separation problem, also known as spike sorting. However, these new devices challenge the classical way to do spike sorting. Here we review different methods that have been developed to sort spikes from these large-scale recordings. We describe the common properties of these algorithms, as well as their main differences. Finally, we outline the issues that remain to be solved by future spike sorting algorithms. Copyright © 2017 Elsevier Ltd. All rights reserved.
Genetic algorithms and supernovae type Ia analysis
International Nuclear Information System (INIS)
Bogdanos, Charalampos; Nesseris, Savvas
2009-01-01
We introduce genetic algorithms as a means to analyze supernovae type Ia data and extract model-independent constraints on the evolution of the Dark Energy equation of state w(z) ≡ P DE /ρ DE . Specifically, we will give a brief introduction to the genetic algorithms along with some simple examples to illustrate their advantages and finally we will apply them to the supernovae type Ia data. We find that genetic algorithms can lead to results in line with already established parametric and non-parametric reconstruction methods and could be used as a complementary way of treating SNIa data. As a non-parametric method, genetic algorithms provide a model-independent way to analyze data and can minimize bias due to premature choice of a dark energy model
A Sequence of Sorting Strategies.
Duncan, David R.; Litwiller, Bonnie H.
1984-01-01
Describes eight increasingly sophisticated and efficient sorting algorithms including linear insertion, binary insertion, shellsort, bubble exchange, shakersort, quick sort, straight selection, and tree selection. Provides challenges for the reader and the student to program these efficiently. (JM)
Results of Evolution Supervised by Genetic Algorithms
Directory of Open Access Journals (Sweden)
Lorentz JÄNTSCHI
2010-09-01
Full Text Available The efficiency of a genetic algorithm is frequently assessed using a series of operators of evolution like crossover operators, mutation operators or other dynamic parameters. The present paper aimed to review the main results of evolution supervised by genetic algorithms used to identify solutions to agricultural and horticultural hard problems and to discuss the results of using a genetic algorithms on structure-activity relationships in terms of behavior of evolution supervised by genetic algorithms. A genetic algorithm had been developed and implemented in order to identify the optimal solution in term of estimation power of a multiple linear regression approach for structure-activity relationships. Three survival and three selection strategies (proportional, deterministic and tournament were investigated in order to identify the best survival-selection strategy able to lead to the model with higher estimation power. The Molecular Descriptors Family for structure characterization of a sample of 206 polychlorinated biphenyls with measured octanol-water partition coefficients was used as case study. Evolution using different selection and survival strategies proved to create populations of genotypes living in the evolution space with different diversity and variability. Under a series of criteria of comparisons these populations proved to be grouped and the groups were showed to be statistically different one to each other. The conclusions about genetic algorithm evolution according to a number of criteria were also highlighted.
Parallel integer sorting with medium and fine-scale parallelism
Dagum, Leonardo
1993-01-01
Two new parallel integer sorting algorithms, queue-sort and barrel-sort, are presented and analyzed in detail. These algorithms do not have optimal parallel complexity, yet they show very good performance in practice. Queue-sort designed for fine-scale parallel architectures which allow the queueing of multiple messages to the same destination. Barrel-sort is designed for medium-scale parallel architectures with a high message passing overhead. The performance results from the implementation of queue-sort on a Connection Machine CM-2 and barrel-sort on a 128 processor iPSC/860 are given. The two implementations are found to be comparable in performance but not as good as a fully vectorized bucket sort on the Cray YMP.
International Nuclear Information System (INIS)
Cao Ruifen; Li Guoli; Song Gang; Zhao Pan; Lin Hui; Wu Aidong; Huang Chenyu; Wu Yican
2007-01-01
Objective: To provide a fast and effective multi-objective optimization algorithm for inverse radiotherapy treatment planning system. Methods: Non-dominated Sorting Genetic Algorithm-NSGA-II is a representative of multi-objective evolutionary optimization algorithms and excels the others. The paper produces ANSGA-II that makes use of advantage of NSGA-II, and uses adaptive crossover and mutation to improve its flexibility; according the character of inverse radiotherapy treatment planning, the paper uses the pre-known knowledge to generate individuals of every generation in the course of optimization, which enhances the convergent speed and improves efficiency. Results: The example of optimizing average dose of a sheet of CT, including PTV, OAR, NT, proves the algorithm could find satisfied solutions in several minutes. Conclusions: The algorithm could provide clinic inverse radiotherapy treatment planning system with selection of optimization algorithms. (authors)
Comparison of genetic algorithms with conjugate gradient methods
Bosworth, J. L.; Foo, N. Y.; Zeigler, B. P.
1972-01-01
Genetic algorithms for mathematical function optimization are modeled on search strategies employed in natural adaptation. Comparisons of genetic algorithms with conjugate gradient methods, which were made on an IBM 1800 digital computer, show that genetic algorithms display superior performance over gradient methods for functions which are poorly behaved mathematically, for multimodal functions, and for functions obscured by additive random noise. Genetic methods offer performance comparable to gradient methods for many of the standard functions.
Particle swarm genetic algorithm and its application
International Nuclear Information System (INIS)
Liu Chengxiang; Yan Changxiang; Wang Jianjun; Liu Zhenhai
2012-01-01
To solve the problems of slow convergence speed and tendency to fall into the local optimum of the standard particle swarm optimization while dealing with nonlinear constraint optimization problem, a particle swarm genetic algorithm is designed. The proposed algorithm adopts feasibility principle handles constraint conditions and avoids the difficulty of penalty function method in selecting punishment factor, generates initial feasible group randomly, which accelerates particle swarm convergence speed, and introduces genetic algorithm crossover and mutation strategy to avoid particle swarm falls into the local optimum Through the optimization calculation of the typical test functions, the results show that particle swarm genetic algorithm has better optimized performance. The algorithm is applied in nuclear power plant optimization, and the optimization results are significantly. (authors)
Directory of Open Access Journals (Sweden)
Dazhi Jiang
2015-01-01
Full Text Available At present there is a wide range of evolutionary algorithms available to researchers and practitioners. Despite the great diversity of these algorithms, virtually all of the algorithms share one feature: they have been manually designed. A fundamental question is “are there any algorithms that can design evolutionary algorithms automatically?” A more complete definition of the question is “can computer construct an algorithm which will generate algorithms according to the requirement of a problem?” In this paper, a novel evolutionary algorithm based on automatic designing of genetic operators is presented to address these questions. The resulting algorithm not only explores solutions in the problem space like most traditional evolutionary algorithms do, but also automatically generates genetic operators in the operator space. In order to verify the performance of the proposed algorithm, comprehensive experiments on 23 well-known benchmark optimization problems are conducted. The results show that the proposed algorithm can outperform standard differential evolution algorithm in terms of convergence speed and solution accuracy which shows that the algorithm designed automatically by computers can compete with the algorithms designed by human beings.
BayesMotif: de novo protein sorting motif discovery from impure datasets.
Hu, Jianjun; Zhang, Fan
2010-01-18
Protein sorting is the process that newly synthesized proteins are transported to their target locations within or outside of the cell. This process is precisely regulated by protein sorting signals in different forms. A major category of sorting signals are amino acid sub-sequences usually located at the N-terminals or C-terminals of protein sequences. Genome-wide experimental identification of protein sorting signals is extremely time-consuming and costly. Effective computational algorithms for de novo discovery of protein sorting signals is needed to improve the understanding of protein sorting mechanisms. We formulated the protein sorting motif discovery problem as a classification problem and proposed a Bayesian classifier based algorithm (BayesMotif) for de novo identification of a common type of protein sorting motifs in which a highly conserved anchor is present along with a less conserved motif regions. A false positive removal procedure is developed to iteratively remove sequences that are unlikely to contain true motifs so that the algorithm can identify motifs from impure input sequences. Experiments on both implanted motif datasets and real-world datasets showed that the enhanced BayesMotif algorithm can identify anchored sorting motifs from pure or impure protein sequence dataset. It also shows that the false positive removal procedure can help to identify true motifs even when there is only 20% of the input sequences containing true motif instances. We proposed BayesMotif, a novel Bayesian classification based algorithm for de novo discovery of a special category of anchored protein sorting motifs from impure datasets. Compared to conventional motif discovery algorithms such as MEME, our algorithm can find less-conserved motifs with short highly conserved anchors. Our algorithm also has the advantage of easy incorporation of additional meta-sequence features such as hydrophobicity or charge of the motifs which may help to overcome the limitations of
Ortuño, Francisco M; Valenzuela, Olga; Rojas, Fernando; Pomares, Hector; Florido, Javier P; Urquiza, Jose M; Rojas, Ignacio
2013-09-01
Multiple sequence alignments (MSAs) are widely used approaches in bioinformatics to carry out other tasks such as structure predictions, biological function analyses or phylogenetic modeling. However, current tools usually provide partially optimal alignments, as each one is focused on specific biological features. Thus, the same set of sequences can produce different alignments, above all when sequences are less similar. Consequently, researchers and biologists do not agree about which is the most suitable way to evaluate MSAs. Recent evaluations tend to use more complex scores including further biological features. Among them, 3D structures are increasingly being used to evaluate alignments. Because structures are more conserved in proteins than sequences, scores with structural information are better suited to evaluate more distant relationships between sequences. The proposed multiobjective algorithm, based on the non-dominated sorting genetic algorithm, aims to jointly optimize three objectives: STRIKE score, non-gaps percentage and totally conserved columns. It was significantly assessed on the BAliBASE benchmark according to the Kruskal-Wallis test (P algorithm also outperforms other aligners, such as ClustalW, Multiple Sequence Alignment Genetic Algorithm (MSA-GA), PRRP, DIALIGN, Hidden Markov Model Training (HMMT), Pattern-Induced Multi-sequence Alignment (PIMA), MULTIALIGN, Sequence Alignment Genetic Algorithm (SAGA), PILEUP, Rubber Band Technique Genetic Algorithm (RBT-GA) and Vertical Decomposition Genetic Algorithm (VDGA), according to the Wilcoxon signed-rank test (P 0.05) with the advantage of being able to use less structures. Structural information is included within the objective function to evaluate more accurately the obtained alignments. The source code is available at http://www.ugr.es/~fortuno/MOSAStrE/MO-SAStrE.zip.
A NEW HYBRID GENETIC ALGORITHM FOR VERTEX COVER PROBLEM
UĞURLU, Onur
2015-01-01
The minimum vertex cover problem belongs to the class of NP-compl ete graph theoretical problems. This paper presents a hybrid genetic algorithm to solve minimum ver tex cover problem. In this paper, it has been shown that when local optimization technique is added t o genetic algorithm to form hybrid genetic algorithm, it gives more quality solution than simple genet ic algorithm. Also, anew mutation operator has been developed especially for minimum verte...
Using a genetic algorithm to solve fluid-flow problems
International Nuclear Information System (INIS)
Pryor, R.J.
1990-01-01
Genetic algorithms are based on the mechanics of the natural selection and natural genetics processes. These algorithms are finding increasing application to a wide variety of engineering optimization and machine learning problems. In this paper, the authors demonstrate the use of a genetic algorithm to solve fluid flow problems. Specifically, the authors use the algorithm to solve the one-dimensional flow equations for a pipe
Unsupervised spike sorting based on discriminative subspace learning.
Keshtkaran, Mohammad Reza; Yang, Zhi
2014-01-01
Spike sorting is a fundamental preprocessing step for many neuroscience studies which rely on the analysis of spike trains. In this paper, we present two unsupervised spike sorting algorithms based on discriminative subspace learning. The first algorithm simultaneously learns the discriminative feature subspace and performs clustering. It uses histogram of features in the most discriminative projection to detect the number of neurons. The second algorithm performs hierarchical divisive clustering that learns a discriminative 1-dimensional subspace for clustering in each level of the hierarchy until achieving almost unimodal distribution in the subspace. The algorithms are tested on synthetic and in-vivo data, and are compared against two widely used spike sorting methods. The comparative results demonstrate that our spike sorting methods can achieve substantially higher accuracy in lower dimensional feature space, and they are highly robust to noise. Moreover, they provide significantly better cluster separability in the learned subspace than in the subspace obtained by principal component analysis or wavelet transform.
Bakermans-Kranenburg, M.J.; van IJzendoorn, M.H.; Bokhorst, C.L.; Schuengel, C.
2004-01-01
In this first behavior genetic study on infant-father attachment, we estimated genetic and environmental influences on infant-father attachment behaviors and on temperamental dependency, both assessed with the Attachment Q-Sort (AQS; B. E.Vaughn & E. Waters, 1990; E. Waters, 1995). Mothers of mono-
Using Genetic Algorithms for Building Metrics of Collaborative Systems
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Cristian CIUREA
2011-01-01
Full Text Available he paper objective is to reveal the importance of genetic algorithms in building robust metrics of collaborative systems. The main types of collaborative systems in economy are presented and some characteristics of genetic algorithms are described. A genetic algorithm was implemented in order to determine the local maximum and minimum points of the relative complexity function associated to a collaborative banking system. The intelligent collaborative systems based on genetic algorithms, representing the new generation of collaborative systems, are analyzed and the implementation of auto-adaptive interfaces in a banking application is described.
Applicability of genetic algorithms to parameter estimation of economic models
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Marcel Ševela
2004-01-01
Full Text Available The paper concentrates on capability of genetic algorithms for parameter estimation of non-linear economic models. In the paper we test the ability of genetic algorithms to estimate of parameters of demand function for durable goods and simultaneously search for parameters of genetic algorithm that lead to maximum effectiveness of the computation algorithm. The genetic algorithms connect deterministic iterative computation methods with stochastic methods. In the genteic aůgorithm approach each possible solution is represented by one individual, those life and lifes of all generations of individuals run under a few parameter of genetic algorithm. Our simulations resulted in optimal mutation rate of 15% of all bits in chromosomes, optimal elitism rate 20%. We can not set the optimal extend of generation, because it proves positive correlation with effectiveness of genetic algorithm in all range under research, but its impact is degreasing. The used genetic algorithm was sensitive to mutation rate at most, than to extend of generation. The sensitivity to elitism rate is not so strong.
Genetic algorithms for protein threading.
Yadgari, J; Amir, A; Unger, R
1998-01-01
Despite many years of efforts, a direct prediction of protein structure from sequence is still not possible. As a result, in the last few years researchers have started to address the "inverse folding problem": Identifying and aligning a sequence to the fold with which it is most compatible, a process known as "threading". In two meetings in which protein folding predictions were objectively evaluated, it became clear that threading as a concept promises a real breakthrough, but that much improvement is still needed in the technique itself. Threading is a NP-hard problem, and thus no general polynomial solution can be expected. Still a practical approach with demonstrated ability to find optimal solutions in many cases, and acceptable solutions in other cases, is needed. We applied the technique of Genetic Algorithms in order to significantly improve the ability of threading algorithms to find the optimal alignment of a sequence to a structure, i.e. the alignment with the minimum free energy. A major progress reported here is the design of a representation of the threading alignment as a string of fixed length. With this representation validation of alignments and genetic operators are effectively implemented. Appropriate data structure and parameters have been selected. It is shown that Genetic Algorithm threading is effective and is able to find the optimal alignment in a few test cases. Furthermore, the described algorithm is shown to perform well even without pre-definition of core elements. Existing threading methods are dependent on such constraints to make their calculations feasible. But the concept of core elements is inherently arbitrary and should be avoided if possible. While a rigorous proof is hard to submit yet an, we present indications that indeed Genetic Algorithm threading is capable of finding consistently good solutions of full alignments in search spaces of size up to 10(70).
Huang, Yongtai
2014-03-01
Numerical water quality models are developed to predict contaminant fate and transport in receiving waters such as reservoirs and lakes. They can be helpful tools for water resource management. The objective of this study is to calibrate a water quality model which was set up to simulate the water quality conditions of Pepacton Reservoir, Downsville, New York, USA, using an aggregation hybrid genetic algorithm (AHGA) and a non-dominated sorting hybrid genetic algorithm (NSHGA). Both AHGA and NSHGA use a hybrid genetic algorithm (HGA) as optimization engines but are different in fitness assignment. In the AHGA, a weighted sum of scaled simulation errors is designed as an overall objective function to measure the fitness of solutions (i.e., parameter values). In the NSHGA, a method based on non-dominated sorting and Euclidean distances is proposed to calculate the dummy fitness of solutions. In addition, this study also compares the AHGA and the NSHGA. The purpose of this comparison is to determine whether the objective function values (i.e., simulation errors) and simulated results obtained by the AHGA and the NSHGA are significantly different from each other. The results show that the objective function values from the two HGAs are good compromises between all objective functions, and the calibrated model results match the observed data reasonably well and are comparable to other studies, supporting and justifying the use of multi-objective calibration.
Genetic Algorithms for Multiple-Choice Problems
Aickelin, Uwe
2010-04-01
This thesis investigates the use of problem-specific knowledge to enhance a genetic algorithm approach to multiple-choice optimisation problems.It shows that such information can significantly enhance performance, but that the choice of information and the way it is included are important factors for success.Two multiple-choice problems are considered.The first is constructing a feasible nurse roster that considers as many requests as possible.In the second problem, shops are allocated to locations in a mall subject to constraints and maximising the overall income.Genetic algorithms are chosen for their well-known robustness and ability to solve large and complex discrete optimisation problems.However, a survey of the literature reveals room for further research into generic ways to include constraints into a genetic algorithm framework.Hence, the main theme of this work is to balance feasibility and cost of solutions.In particular, co-operative co-evolution with hierarchical sub-populations, problem structure exploiting repair schemes and indirect genetic algorithms with self-adjusting decoder functions are identified as promising approaches.The research starts by applying standard genetic algorithms to the problems and explaining the failure of such approaches due to epistasis.To overcome this, problem-specific information is added in a variety of ways, some of which are designed to increase the number of feasible solutions found whilst others are intended to improve the quality of such solutions.As well as a theoretical discussion as to the underlying reasons for using each operator,extensive computational experiments are carried out on a variety of data.These show that the indirect approach relies less on problem structure and hence is easier to implement and superior in solution quality.
External parallel sorting with multiprocessor computers
International Nuclear Information System (INIS)
Comanceau, S.I.
1984-01-01
This article describes methods of external sorting in which the entire main computer memory is used for the internal sorting of entries, forming out of them sorted segments of the greatest possible size, and outputting them to external memories. The obtained segments are merged into larger segments until all entries form one ordered segment. The described methods are suitable for sequential files stored on magnetic tape. The needs of the sorting algorithm can be met by using the relatively slow peripheral storage devices (e.g., tapes, disks, drums). The efficiency of the external sorting methods is determined by calculating the total sorting time as a function of the number of entries to be sorted and the number of parallel processors participating in the sorting process
The Applications of Genetic Algorithms in Medicine
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Ali Ghaheri
2015-11-01
Full Text Available A great wealth of information is hidden amid medical research data that in some cases cannot be easily analyzed, if at all, using classical statistical methods. Inspired by nature, metaheuristic algorithms have been developed to offer optimal or near-optimal solutions to complex data analysis and decision-making tasks in a reasonable time. Due to their powerful features, metaheuristic algorithms have frequently been used in other fields of sciences. In medicine, however, the use of these algorithms are not known by physicians who may well benefit by applying them to solve complex medical problems. Therefore, in this paper, we introduce the genetic algorithm and its applications in medicine. The use of the genetic algorithm has promising implications in various medical specialties including radiology, radiotherapy, oncology, pediatrics, cardiology, endocrinology, surgery, obstetrics and gynecology, pulmonology, infectious diseases, orthopedics, rehabilitation medicine, neurology, pharmacotherapy, and health care management. This review introduces the applications of the genetic algorithm in disease screening, diagnosis, treatment planning, pharmacovigilance, prognosis, and health care management, and enables physicians to envision possible applications of this metaheuristic method in their medical career.
The Applications of Genetic Algorithms in Medicine.
Ghaheri, Ali; Shoar, Saeed; Naderan, Mohammad; Hoseini, Sayed Shahabuddin
2015-11-01
A great wealth of information is hidden amid medical research data that in some cases cannot be easily analyzed, if at all, using classical statistical methods. Inspired by nature, metaheuristic algorithms have been developed to offer optimal or near-optimal solutions to complex data analysis and decision-making tasks in a reasonable time. Due to their powerful features, metaheuristic algorithms have frequently been used in other fields of sciences. In medicine, however, the use of these algorithms are not known by physicians who may well benefit by applying them to solve complex medical problems. Therefore, in this paper, we introduce the genetic algorithm and its applications in medicine. The use of the genetic algorithm has promising implications in various medical specialties including radiology, radiotherapy, oncology, pediatrics, cardiology, endocrinology, surgery, obstetrics and gynecology, pulmonology, infectious diseases, orthopedics, rehabilitation medicine, neurology, pharmacotherapy, and health care management. This review introduces the applications of the genetic algorithm in disease screening, diagnosis, treatment planning, pharmacovigilance, prognosis, and health care management, and enables physicians to envision possible applications of this metaheuristic method in their medical career.].
Quantum Genetic Algorithms for Computer Scientists
Lahoz Beltrá, Rafael
2016-01-01
Genetic algorithms (GAs) are a class of evolutionary algorithms inspired by Darwinian natural selection. They are popular heuristic optimisation methods based on simulated genetic mechanisms, i.e., mutation, crossover, etc. and population dynamical processes such as reproduction, selection, etc. Over the last decade, the possibility to emulate a quantum computer (a computer using quantum-mechanical phenomena to perform operations on data) has led to a new class of GAs known as “Quantum Geneti...
Automatic spike sorting using tuning information.
Ventura, Valérie
2009-09-01
Current spike sorting methods focus on clustering neurons' characteristic spike waveforms. The resulting spike-sorted data are typically used to estimate how covariates of interest modulate the firing rates of neurons. However, when these covariates do modulate the firing rates, they provide information about spikes' identities, which thus far have been ignored for the purpose of spike sorting. This letter describes a novel approach to spike sorting, which incorporates both waveform information and tuning information obtained from the modulation of firing rates. Because it efficiently uses all the available information, this spike sorter yields lower spike misclassification rates than traditional automatic spike sorters. This theoretical result is verified empirically on several examples. The proposed method does not require additional assumptions; only its implementation is different. It essentially consists of performing spike sorting and tuning estimation simultaneously rather than sequentially, as is currently done. We used an expectation-maximization maximum likelihood algorithm to implement the new spike sorter. We present the general form of this algorithm and provide a detailed implementable version under the assumptions that neurons are independent and spike according to Poisson processes. Finally, we uncover a systematic flaw of spike sorting based on waveform information only.
Optimization of Pressurizer Based on Genetic-Simplex Algorithm
International Nuclear Information System (INIS)
Wang, Cheng; Yan, Chang Qi; Wang, Jian Jun
2014-01-01
Pressurizer is one of key components in nuclear power system. It's important to control the dimension in the design of pressurizer through optimization techniques. In this work, a mathematic model of a vertical electric heating pressurizer was established. A new Genetic-Simplex Algorithm (GSA) that combines genetic algorithm and simplex algorithm was developed to enhance the searching ability, and the comparison among modified and original algorithms is conducted by calculating the benchmark function. Furthermore, the optimization design of pressurizer, taking minimization of volume and net weight as objectives, was carried out considering thermal-hydraulic and geometric constraints through GSA. The results indicate that the mathematical model is agreeable for the pressurizer and the new algorithm is more effective than the traditional genetic algorithm. The optimization design shows obvious validity and can provide guidance for real engineering design
On Sorting Genomes with DCJ and Indels
Braga, Marília D. V.
A previous work of Braga, Willing and Stoye compared two genomes with unequal content, but without duplications, and presented a new linear time algorithm to compute the genomic distance, considering double cut and join (DCJ) operations, insertions and deletions. Here we derive from this approach an algorithm to sort one genome into another one also using DCJ, insertions and deletions. The optimal sorting scenarios can have different compositions and we compare two types of sorting scenarios: one that maximizes and one that minimizes the number of DCJ operations with respect to the number of insertions and deletions.
Yu, Jessica S; Pertusi, Dante A; Adeniran, Adebola V; Tyo, Keith E J
2017-03-15
High throughput screening by fluorescence activated cell sorting (FACS) is a common task in protein engineering and directed evolution. It can also be a rate-limiting step if high false positive or negative rates necessitate multiple rounds of enrichment. Current FACS software requires the user to define sorting gates by intuition and is practically limited to two dimensions. In cases when multiple rounds of enrichment are required, the software cannot forecast the enrichment effort required. We have developed CellSort, a support vector machine (SVM) algorithm that identifies optimal sorting gates based on machine learning using positive and negative control populations. CellSort can take advantage of more than two dimensions to enhance the ability to distinguish between populations. We also present a Bayesian approach to predict the number of sorting rounds required to enrich a population from a given library size. This Bayesian approach allowed us to determine strategies for biasing the sorting gates in order to reduce the required number of enrichment rounds. This algorithm should be generally useful for improve sorting outcomes and reducing effort when using FACS. Source code available at http://tyolab.northwestern.edu/tools/ . k-tyo@northwestern.edu. Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com
Efficient sorting using registers and caches
DEFF Research Database (Denmark)
Wickremesinghe, Rajiv; Arge, Lars Allan; Chase, Jeffrey S.
2002-01-01
. Inadequate models lead to poor algorithmic choices and an incomplete understanding of algorithm behavior on real machines.A key step toward developing better models is to quantify the performance effects of features not reflected in the models. This paper explores the effect of memory system features...... on sorting performance. We introduce a new cache-conscious sorting algorithm, R-MERGE, which achieves better performance in practice over algorithms that are superior in the theoretical models. R-MERGE is designed to minimize memory stall cycles rather than cache misses by considering features common to many......Modern computer systems have increasingly complex memory systems. Common machine models for algorithm analysis do not reflect many of the features of these systems, e.g., large register sets, lockup-free caches, cache hierarchies, associativity, cache line fetching, and streaming behavior...
Neuronal spike sorting based on radial basis function neural networks
Directory of Open Access Journals (Sweden)
Taghavi Kani M
2011-02-01
Full Text Available "nBackground: Studying the behavior of a society of neurons, extracting the communication mechanisms of brain with other tissues, finding treatment for some nervous system diseases and designing neuroprosthetic devices, require an algorithm to sort neuralspikes automatically. However, sorting neural spikes is a challenging task because of the low signal to noise ratio (SNR of the spikes. The main purpose of this study was to design an automatic algorithm for classifying neuronal spikes that are emitted from a specific region of the nervous system."n "nMethods: The spike sorting process usually consists of three stages: detection, feature extraction and sorting. We initially used signal statistics to detect neural spikes. Then, we chose a limited number of typical spikes as features and finally used them to train a radial basis function (RBF neural network to sort the spikes. In most spike sorting devices, these signals are not linearly discriminative. In order to solve this problem, the aforesaid RBF neural network was used."n "nResults: After the learning process, our proposed algorithm classified any arbitrary spike. The obtained results showed that even though the proposed Radial Basis Spike Sorter (RBSS reached to the same error as the previous methods, however, the computational costs were much lower compared to other algorithms. Moreover, the competitive points of the proposed algorithm were its good speed and low computational complexity."n "nConclusion: Regarding the results of this study, the proposed algorithm seems to serve the purpose of procedures that require real-time processing and spike sorting.
Genetic algorithms in loading pattern optimization
International Nuclear Information System (INIS)
Yilmazbayhan, A.; Tombakoglu, M.; Bekar, K. B.; Erdemli, A. Oe
2001-01-01
Genetic Algorithm (GA) based systems are used for the loading pattern optimization. The use of Genetic Algorithm operators such as regional crossover, crossover and mutation, and selection of initial population size for PWRs are discussed. Antithetic variates are used to generate the initial population. The performance of GA with antithetic variates is compared to traditional GA. The results of multi-cycle optimization are discussed for objective function taking into account cycle burn-up and discharge burn-up
Adaptive sensor fusion using genetic algorithms
International Nuclear Information System (INIS)
Fitzgerald, D.S.; Adams, D.G.
1994-01-01
Past attempts at sensor fusion have used some form of Boolean logic to combine the sensor information. As an alteniative, an adaptive ''fuzzy'' sensor fusion technique is described in this paper. This technique exploits the robust capabilities of fuzzy logic in the decision process as well as the optimization features of the genetic algorithm. This paper presents a brief background on fuzzy logic and genetic algorithms and how they are used in an online implementation of adaptive sensor fusion
Real-Coded Quantum-Inspired Genetic Algorithm-Based BP Neural Network Algorithm
Directory of Open Access Journals (Sweden)
Jianyong Liu
2015-01-01
Full Text Available The method that the real-coded quantum-inspired genetic algorithm (RQGA used to optimize the weights and threshold of BP neural network is proposed to overcome the defect that the gradient descent method makes the algorithm easily fall into local optimal value in the learning process. Quantum genetic algorithm (QGA is with good directional global optimization ability, but the conventional QGA is based on binary coding; the speed of calculation is reduced by the coding and decoding processes. So, RQGA is introduced to explore the search space, and the improved varied learning rate is adopted to train the BP neural network. Simulation test shows that the proposed algorithm is effective to rapidly converge to the solution conformed to constraint conditions.
The solution space of sorting by DCJ.
Braga, Marília D V; Stoye, Jens
2010-09-01
In genome rearrangements, the double cut and join (DCJ) operation, introduced by Yancopoulos et al. in 2005, allows one to represent most rearrangement events that could happen in multichromosomal genomes, such as inversions, translocations, fusions, and fissions. No restriction on the genome structure considering linear and circular chromosomes is imposed. An advantage of this general model is that it leads to considerable algorithmic simplifications compared to other genome rearrangement models. Recently, several works concerning the DCJ operation have been published, and in particular, an algorithm was proposed to find an optimal DCJ sequence for sorting one genome into another one. Here we study the solution space of this problem and give an easy-to-compute formula that corresponds to the exact number of optimal DCJ sorting sequences for a particular subset of instances of the problem. We also give an algorithm to count the number of optimal sorting sequences for any instance of the problem. Another interesting result is the demonstration of the possibility of obtaining one optimal sorting sequence by properly replacing any pair of consecutive operations in another optimal sequence. As a consequence, any optimal sorting sequence can be obtained from one other by applying such replacements successively, but the problem of finding the shortest number of replacements between two sorting sequences is still open.
A QR code identification technology in package auto-sorting system
di, Yi-Juan; Shi, Jian-Ping; Mao, Guo-Yong
2017-07-01
Traditional manual sorting operation is not suitable for the development of Chinese logistics. For better sorting packages, a QR code recognition technology is proposed to identify the QR code label on the packages in package auto-sorting system. The experimental results compared with other algorithms in literatures demonstrate that the proposed method is valid and its performance is superior to other algorithms.
Mission Planning for Unmanned Aircraft with Genetic Algorithms
DEFF Research Database (Denmark)
Hansen, Karl Damkjær
unmanned aircraft are used for aerial surveying of the crops. The farmer takes the role of the analyst above, who does not necessarily have any specific interest in remote controlled aircraft but needs the outcome of the survey. The recurring method in the study is the genetic algorithm; a flexible...... contributions are made in the area of the genetic algorithms. One is a method to decide on the right time to stop the computation of the plan, when the right balance is stricken between using the time planning and using the time flying. The other contribution is a characterization of the evolutionary operators...... used in the genetic algorithm. The result is a measure based on entropy to evaluate and control the diversity of the population of the genetic algorithm, which is an important factor its effectiveness....
Thubagere, Anupama J; Li, Wei; Johnson, Robert F; Chen, Zibo; Doroudi, Shayan; Lee, Yae Lim; Izatt, Gregory; Wittman, Sarah; Srinivas, Niranjan; Woods, Damien; Winfree, Erik; Qian, Lulu
2017-09-15
Two critical challenges in the design and synthesis of molecular robots are modularity and algorithm simplicity. We demonstrate three modular building blocks for a DNA robot that performs cargo sorting at the molecular level. A simple algorithm encoding recognition between cargos and their destinations allows for a simple robot design: a single-stranded DNA with one leg and two foot domains for walking, and one arm and one hand domain for picking up and dropping off cargos. The robot explores a two-dimensional testing ground on the surface of DNA origami, picks up multiple cargos of two types that are initially at unordered locations, and delivers them to specified destinations until all molecules are sorted into two distinct piles. The robot is designed to perform a random walk without any energy supply. Exploiting this feature, a single robot can repeatedly sort multiple cargos. Localization on DNA origami allows for distinct cargo-sorting tasks to take place simultaneously in one test tube or for multiple robots to collectively perform the same task. Copyright © 2017, American Association for the Advancement of Science.
A multiple objective magnet sorting algorithm for the ALS insertion devices
International Nuclear Information System (INIS)
Humphries, D.; Goetz, F.; Kownacki, P.; Marks, S.; Schlueter, R.
1994-07-01
Insertion devices for the Advanced Light Source (ALS) incorporate large numbers of permanent magnets which have a variety of magnetization orientation errors. These orientation errors can produce field errors which affect both the spectral brightness of the insertion devices and the storage ring electron beam dynamics. A perturbation study was carried out to quantify the effects of orientation errors acting in a hybrid magnetic structure. The results of this study were used to develop a multiple stage sorting algorithm which minimizes undesirable integrated field errors and essentially eliminates pole excitation errors. When applied to a measured magnet population for an existing insertion device, an order of magnitude reduction in integrated field errors was achieved while maintaining near zero pole excitation errors
Reactor controller design using genetic algorithms with simulated annealing
International Nuclear Information System (INIS)
Erkan, K.; Buetuen, E.
2000-01-01
This chapter presents a digital control system for ITU TRIGA Mark-II reactor using genetic algorithms with simulated annealing. The basic principles of genetic algorithms for problem solving are inspired by the mechanism of natural selection. Natural selection is a biological process in which stronger individuals are likely to be winners in a competing environment. Genetic algorithms use a direct analogy of natural evolution. Genetic algorithms are global search techniques for optimisation but they are poor at hill-climbing. Simulated annealing has the ability of probabilistic hill-climbing. Thus, the two techniques are combined here to get a fine-tuned algorithm that yields a faster convergence and a more accurate search by introducing a new mutation operator like simulated annealing or an adaptive cooling schedule. In control system design, there are currently no systematic approaches to choose the controller parameters to obtain the desired performance. The controller parameters are usually determined by test and error with simulation and experimental analysis. Genetic algorithm is used automatically and efficiently searching for a set of controller parameters for better performance. (orig.)
Genetic algorithm for neural networks optimization
Setyawati, Bina R.; Creese, Robert C.; Sahirman, Sidharta
2004-11-01
This paper examines the forecasting performance of multi-layer feed forward neural networks in modeling a particular foreign exchange rates, i.e. Japanese Yen/US Dollar. The effects of two learning methods, Back Propagation and Genetic Algorithm, in which the neural network topology and other parameters fixed, were investigated. The early results indicate that the application of this hybrid system seems to be well suited for the forecasting of foreign exchange rates. The Neural Networks and Genetic Algorithm were programmed using MATLAB«.
Optimal support arrangement of piping systems using genetic algorithm
International Nuclear Information System (INIS)
Chiba, T.; Okado, S.; Fujii, I.; Itami, K.
1996-01-01
The support arrangement is one of the important factors in the design of piping systems. Much time is required to decide the arrangement of the supports. The authors applied a genetic algorithm to find the optimum support arrangement for piping systems. Examples are provided to illustrate the effectiveness of the genetic algorithm. Good results are obtained when applying the genetic algorithm to the actual designing of the piping system
Optimising a shaft's geometry by applying genetic algorithms
Directory of Open Access Journals (Sweden)
María Alejandra Guzmán
2005-05-01
Full Text Available Many engnieering design tasks involve optimising several conflicting goals; these types of problem are known as Multiobjective Optimisation Problems (MOPs. Evolutionary techniques have proved to be an effective tool for finding solutions to these MOPs during the last decade, Variations on the basic generic algorithm have been particulary proposed by different researchers for finding rapid optimal solutions to MOPs. The NSGA (Non-dominated Sorting Generic Algorithm has been implemented in this paper for finding an optimal design for a shaft subjected to cyclic loads, the conflycting goals being minimum weight and minimum lateral deflection.
Modeling of genetic algorithms with a finite population
C.H.M. van Kemenade
1997-01-01
textabstractCross-competition between non-overlapping building blocks can strongly influence the performance of evolutionary algorithms. The choice of the selection scheme can have a strong influence on the performance of a genetic algorithm. This paper describes a number of different genetic
Application of a fast sorting algorithm to the assignment of mass spectrometric cross-linking data.
Petrotchenko, Evgeniy V; Borchers, Christoph H
2014-09-01
Cross-linking combined with MS involves enzymatic digestion of cross-linked proteins and identifying cross-linked peptides. Assignment of cross-linked peptide masses requires a search of all possible binary combinations of peptides from the cross-linked proteins' sequences, which becomes impractical with increasing complexity of the protein system and/or if digestion enzyme specificity is relaxed. Here, we describe the application of a fast sorting algorithm to search large sequence databases for cross-linked peptide assignments based on mass. This same algorithm has been used previously for assigning disulfide-bridged peptides (Choi et al., ), but has not previously been applied to cross-linking studies. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Dagum, Leonardo
1989-01-01
The data parallel implementation of a particle simulation for hypersonic rarefied flow described by Dagum associates a single parallel data element with each particle in the simulation. The simulated space is divided into discrete regions called cells containing a variable and constantly changing number of particles. The implementation requires a global sort of the parallel data elements so as to arrange them in an order that allows immediate access to the information associated with cells in the simulation. Described here is a very fast algorithm for performing the necessary ranking of the parallel data elements. The performance of the new algorithm is compared with that of the microcoded instruction for ranking on the Connection Machine.
Quantum Genetic Algorithms for Computer Scientists
Directory of Open Access Journals (Sweden)
Rafael Lahoz-Beltra
2016-10-01
Full Text Available Genetic algorithms (GAs are a class of evolutionary algorithms inspired by Darwinian natural selection. They are popular heuristic optimisation methods based on simulated genetic mechanisms, i.e., mutation, crossover, etc. and population dynamical processes such as reproduction, selection, etc. Over the last decade, the possibility to emulate a quantum computer (a computer using quantum-mechanical phenomena to perform operations on data has led to a new class of GAs known as “Quantum Genetic Algorithms” (QGAs. In this review, we present a discussion, future potential, pros and cons of this new class of GAs. The review will be oriented towards computer scientists interested in QGAs “avoiding” the possible difficulties of quantum-mechanical phenomena.
Ship Pipe Routing Design Using NSGA-II and Coevolutionary Algorithm
Directory of Open Access Journals (Sweden)
Wentie Niu
2016-01-01
Full Text Available Pipe route design plays a prominent role in ship design. Due to the complex configuration in layout space with numerous pipelines, diverse design constraints, and obstacles, it is a complicated and time-consuming process to obtain the optimal route of ship pipes. In this article, an optimized design method for branch pipe routing is proposed to improve design efficiency and to reduce human errors. By simplifying equipment and ship hull models and dividing workspace into three-dimensional grid cells, the mathematic model of layout space is constructed. Based on the proposed concept of pipe grading method, the optimization model of pipe routing is established. Then an optimization procedure is presented to deal with pipe route planning problem by combining maze algorithm (MA, nondominated sorting genetic algorithm II (NSGA-II, and cooperative coevolutionary nondominated sorting genetic algorithm II (CCNSGA-II. To improve the performance in genetic algorithm procedure, a fixed-length encoding method is presented based on improved maze algorithm and adaptive region strategy. Fuzzy set theory is employed to extract the best compromise pipeline from Pareto optimal solutions. Simulation test of branch pipe and design optimization of a fuel piping system were carried out to illustrate the design optimization procedure in detail and to verify the feasibility and effectiveness of the proposed methodology.
An Adaptive Filtering Algorithm Based on Genetic Algorithm-Backpropagation Network
Directory of Open Access Journals (Sweden)
Kai Hu
2013-01-01
Full Text Available A new image filtering algorithm is proposed. GA-BPN algorithm uses genetic algorithm (GA to decide weights in a back propagation neural network (BPN. It has better global optimal characteristics than traditional optimal algorithm. In this paper, we used GA-BPN to do image noise filter researching work. Firstly, this paper uses training samples to train GA-BPN as the noise detector. Then, we utilize the well-trained GA-BPN to recognize noise pixels in target image. And at last, an adaptive weighted average algorithm is used to recover noise pixels recognized by GA-BPN. Experiment data shows that this algorithm has better performance than other filters.
A Simple Deep Learning Method for Neuronal Spike Sorting
Yang, Kai; Wu, Haifeng; Zeng, Yu
2017-10-01
Spike sorting is one of key technique to understand brain activity. With the development of modern electrophysiology technology, some recent multi-electrode technologies have been able to record the activity of thousands of neuronal spikes simultaneously. The spike sorting in this case will increase the computational complexity of conventional sorting algorithms. In this paper, we will focus spike sorting on how to reduce the complexity, and introduce a deep learning algorithm, principal component analysis network (PCANet) to spike sorting. The introduced method starts from a conventional model and establish a Toeplitz matrix. Through the column vectors in the matrix, we trains a PCANet, where some eigenvalue vectors of spikes could be extracted. Finally, support vector machine (SVM) is used to sort spikes. In experiments, we choose two groups of simulated data from public databases availably and compare this introduced method with conventional methods. The results indicate that the introduced method indeed has lower complexity with the same sorting errors as the conventional methods.
Using Genetic Algorithms in Secured Business Intelligence Mobile Applications
Directory of Open Access Journals (Sweden)
Silvia TRIF
2011-01-01
Full Text Available The paper aims to assess the use of genetic algorithms for training neural networks used in secured Business Intelligence Mobile Applications. A comparison is made between classic back-propagation method and a genetic algorithm based training. The design of these algorithms is presented. A comparative study is realized for determining the better way of training neural networks, from the point of view of time and memory usage. The results show that genetic algorithms based training offer better performance and memory usage than back-propagation and they are fit to be implemented on mobile devices.
Sorting processes with energy-constrained comparisons*
Geissmann, Barbara; Penna, Paolo
2018-05-01
We study very simple sorting algorithms based on a probabilistic comparator model. In this model, errors in comparing two elements are due to (1) the energy or effort put in the comparison and (2) the difference between the compared elements. Such algorithms repeatedly compare and swap pairs of randomly chosen elements, and they correspond to natural Markovian processes. The study of these Markov chains reveals an interesting phenomenon. Namely, in several cases, the algorithm that repeatedly compares only adjacent elements is better than the one making arbitrary comparisons: in the long-run, the former algorithm produces sequences that are "better sorted". The analysis of the underlying Markov chain poses interesting questions as the latter algorithm yields a nonreversible chain, and therefore its stationary distribution seems difficult to calculate explicitly. We nevertheless provide bounds on the stationary distributions and on the mixing time of these processes in several restrictions.
Ensemble of hybrid genetic algorithm for two-dimensional phase unwrapping
Balakrishnan, D.; Quan, C.; Tay, C. J.
2013-06-01
The phase unwrapping is the final and trickiest step in any phase retrieval technique. Phase unwrapping by artificial intelligence methods (optimization algorithms) such as hybrid genetic algorithm, reverse simulated annealing, particle swarm optimization, minimum cost matching showed better results than conventional phase unwrapping methods. In this paper, Ensemble of hybrid genetic algorithm with parallel populations is proposed to solve the branch-cut phase unwrapping problem. In a single populated hybrid genetic algorithm, the selection, cross-over and mutation operators are applied to obtain new population in every generation. The parameters and choice of operators will affect the performance of the hybrid genetic algorithm. The ensemble of hybrid genetic algorithm will facilitate to have different parameters set and different choice of operators simultaneously. Each population will use different set of parameters and the offspring of each population will compete against the offspring of all other populations, which use different set of parameters. The effectiveness of proposed algorithm is demonstrated by phase unwrapping examples and advantages of the proposed method are discussed.
Mokeddem, Diab; Khellaf, Abdelhafid
2009-01-01
Optimal design problem are widely known by their multiple performance measures that are often competing with each other. In this paper, an optimal multiproduct batch chemical plant design is presented. The design is firstly formulated as a multiobjective optimization problem, to be solved using the well suited non dominating sorting genetic algorithm (NSGA-II). The NSGA-II have capability to achieve fine tuning of variables in determining a set of non dominating solutions distributed along the Pareto front in a single run of the algorithm. The NSGA-II ability to identify a set of optimal solutions provides the decision-maker DM with a complete picture of the optimal solution space to gain better and appropriate choices. Then an outranking with PROMETHEE II helps the decision-maker to finalize the selection of a best compromise. The effectiveness of NSGA-II method with multiojective optimization problem is illustrated through two carefully referenced examples. PMID:19543537
Hybrid Modeling KMeans – Genetic Algorithms in the Health Care Data
Directory of Open Access Journals (Sweden)
Tessy Badriyah
2013-06-01
Full Text Available K-Means is one of the major algorithms widely used in clustering due to its good computational performance. However, K-Means is very sensitive to the initially selected points which randomly selected, and therefore it does not always generate optimum solutions. Genetic algorithm approach can be applied to solve this problem. In this research we examine the potential of applying hybrid GA- KMeans with focus on the area of health care data. We proposed a new technique using hybrid method combining KMeans Clustering and Genetic Algorithms, called the “Hybrid K-Means Genetic Algorithms” (HKGA. HKGA combines the power of Genetic Algorithms and the efficiency of K-Means Clustering. We compare our results with other conventional algorithms and also with other published research as well. Our results demonstrate that the HKGA achieves very good results and in some cases superior to other methods. Keywords: Machine Learning, K-Means, Genetic Algorithms, Hybrid KMeans Genetic Algorithm (HGKA.
Genetic Algorithm Based Economic Dispatch with Valve Point Effect
Energy Technology Data Exchange (ETDEWEB)
Park, Jong Nam; Park, Kyung Won; Kim, Ji Hong; Kim, Jin O [Hanyang University (Korea, Republic of)
1999-03-01
This paper presents a new approach on genetic algorithm to economic dispatch problem for valve point discontinuities. Proposed approach in this paper on genetic algorithms improves the performance to solve economic dispatch problem for valve point discontinuities through improved death penalty method, generation-apart elitism, atavism and sexual selection with sexual distinction. Numerical results on a test system consisting of 13 thermal units show that the proposed approach is faster, more robust and powerful than conventional genetic algorithms. (author). 8 refs., 10 figs.
Development of a Framework for Genetic Algorithms
Wååg, Håkan
2009-01-01
Genetic algorithms is a method of optimization that can be used tosolve many different kinds of problems. This thesis focuses ondeveloping a framework for genetic algorithms that is capable ofsolving at least the two problems explored in the work. Otherproblems are supported by allowing user-made extensions.The purpose of this thesis is to explore the possibilities of geneticalgorithms for optimization problems and artificial intelligenceapplications.To test the framework two applications are...
Evolving temporal association rules with genetic algorithms
Matthews, Stephen G.; Gongora, Mario A.; Hopgood, Adrian A.
2010-01-01
A novel framework for mining temporal association rules by discovering itemsets with a genetic algorithm is introduced. Metaheuristics have been applied to association rule mining, we show the efficacy of extending this to another variant - temporal association rule mining. Our framework is an enhancement to existing temporal association rule mining methods as it employs a genetic algorithm to simultaneously search the rule space and temporal space. A methodology for validating the ability of...
Sorting genomes by reciprocal translocations, insertions, and deletions.
Qi, Xingqin; Li, Guojun; Li, Shuguang; Xu, Ying
2010-01-01
The problem of sorting by reciprocal translocations (abbreviated as SBT) arises from the field of comparative genomics, which is to find a shortest sequence of reciprocal translocations that transforms one genome Pi into another genome Gamma, with the restriction that Pi and Gamma contain the same genes. SBT has been proved to be polynomial-time solvable, and several polynomial algorithms have been developed. In this paper, we show how to extend Bergeron's SBT algorithm to include insertions and deletions, allowing to compare genomes containing different genes. In particular, if the gene set of Pi is a subset (or superset, respectively) of the gene set of Gamma, we present an approximation algorithm for transforming Pi into Gamma by reciprocal translocations and deletions (insertions, respectively), providing a sorting sequence with length at most OPT + 2, where OPT is the minimum number of translocations and deletions (insertions, respectively) needed to transform Pi into Gamma; if Pi and Gamma have different genes but not containing each other, we give a heuristic to transform Pi into Gamma by a shortest sequence of reciprocal translocations, insertions, and deletions, with bounds for the length of the sorting sequence it outputs. At a conceptual level, there is some similarity between our algorithm and the algorithm developed by El Mabrouk which is used to sort two chromosomes with different gene contents by reversals, insertions, and deletions.
Genetic Algorithms in Wind Turbine Airfoil Design
Energy Technology Data Exchange (ETDEWEB)
Grasso, F. [ECN Wind Energy, Petten (Netherlands); Bizzarrini, N.; Coiro, D.P. [Department of Aerospace Engineering, University of Napoli ' Federico II' , Napoli (Italy)
2011-03-15
One key element in the aerodynamic design of wind turbines is the use of specially tailored airfoils to increase the ratio of energy capture to the loading and thereby to reduce cost of energy. This work is focused on the design of a wind turbine airfoil by using numerical optimization. Firstly, the optimization approach is presented; a genetic algorithm is used, coupled with RFOIL solver and a composite Bezier geometrical parameterization. A particularly sensitive point is the choice and implementation of constraints; in order to formalize in the most complete and effective way the design requirements, the effects of activating specific constraints are discussed. A numerical example regarding the design of a high efficiency airfoil for the outer part of a blade by using genetic algorithms is illustrated and the results are compared with existing wind turbine airfoils. Finally a new hybrid design strategy is illustrated and discussed, in which the genetic algorithms are used at the beginning of the design process to explore a wide domain. Then, the gradient based algorithms are used in order to improve the first stage optimum.
Optimization of Multiple Traveling Salesman Problem Based on Simulated Annealing Genetic Algorithm
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Xu Mingji
2017-01-01
Full Text Available It is very effective to solve the multi variable optimization problem by using hierarchical genetic algorithm. This thesis analyzes both advantages and disadvantages of hierarchical genetic algorithm and puts forward an improved simulated annealing genetic algorithm. The new algorithm is applied to solve the multiple traveling salesman problem, which can improve the performance of the solution. First, it improves the design of chromosomes hierarchical structure in terms of redundant hierarchical algorithm, and it suggests a suffix design of chromosomes; Second, concerning to some premature problems of genetic algorithm, it proposes a self-identify crossover operator and mutation; Third, when it comes to the problem of weak ability of local search of genetic algorithm, it stretches the fitness by mixing genetic algorithm with simulated annealing algorithm. Forth, it emulates the problems of N traveling salesmen and M cities so as to verify its feasibility. The simulation and calculation shows that this improved algorithm can be quickly converged to a best global solution, which means the algorithm is encouraging in practical uses.
Introduction to genetic algorithms as a modeling tool
International Nuclear Information System (INIS)
Wildberger, A.M.; Hickok, K.A.
1990-01-01
Genetic algorithms are search and classification techniques modeled on natural adaptive systems. This is an introduction to their use as a modeling tool with emphasis on prospects for their application in the power industry. It is intended to provide enough background information for its audience to begin to follow technical developments in genetic algorithms and to recognize those which might impact on electric power engineering. Beginning with a discussion of genetic algorithms and their origin as a model of biological adaptation, their advantages and disadvantages are described in comparison with other modeling tools such as simulation and neural networks in order to provide guidance in selecting appropriate applications. In particular, their use is described for improving expert systems from actual data and they are suggested as an aid in building mathematical models. Using the Thermal Performance Advisor as an example, it is suggested how genetic algorithms might be used to make a conventional expert system and mathematical model of a power plant adapt automatically to changes in the plant's characteristics
Implementation of Serial and Parallel Bubble Sort on Fpga
Purnomo, Dwi Marhaendro Jati; Arinaldi, Ahmad; Priyantini, Dwi Teguh; Wibisono, Ari; Febrian, Andreas
2016-01-01
Sorting is common process in computational world. Its utilization are on many fields from research to industry. There are many sorting algorithm in nowadays. One of the simplest yet powerful is bubble sort. In this study, bubble sort is implemented on FPGA. The implementation was taken on serial and parallel approach. Serial and parallel bubble sort then compared by means of its memory, execution time, and utility which comprises slices and LUTs. The experiments show that serial bubble sort r...
Keivanian, Farshid; Mehrshad, Nasser; Bijari, Abolfazl
2016-01-01
D Flip-Flop as a digital circuit can be used as a timing element in many sophisticated circuits. Therefore the optimum performance with the lowest power consumption and acceptable delay time will be critical issue in electronics circuits. The newly proposed Dual-Edge Triggered Static D Flip-Flop circuit layout is defined as a multi-objective optimization problem. For this, an optimum fuzzy inference system with fuzzy rules is proposed to enhance the performance and convergence of non-dominated sorting Genetic Algorithm-II by adaptive control of the exploration and exploitation parameters. By using proposed Fuzzy NSGA-II algorithm, the more optimum values for MOSFET channel widths and power supply are discovered in search space than ordinary NSGA types. What is more, the design parameters involving NMOS and PMOS channel widths and power supply voltage and the performance parameters including average power consumption and propagation delay time are linked. To do this, the required mathematical backgrounds are presented in this study. The optimum values for the design parameters of MOSFETs channel widths and power supply are discovered. Based on them the power delay product quantity (PDP) is 6.32 PJ at 125 MHz Clock Frequency, L = 0.18 µm, and T = 27 °C.
Robust reactor power control system design by genetic algorithm
Energy Technology Data Exchange (ETDEWEB)
Lee, Yoon Joon; Cho, Kyung Ho; Kim, Sin [Cheju National University, Cheju (Korea, Republic of)
1998-12-31
The H{sub {infinity}} robust controller for the reactor power control system is designed by use of the mixed weight sensitivity. The system is configured into the typical two-port model with which the weight functions are augmented. Since the solution depends on the weighting functions and the problem is of nonconvex, the genetic algorithm is used to determine the weighting functions. The cost function applied in the genetic algorithm permits the direct control of the power tracking performances. In addition, the actual operating constraints such as rod velocity and acceleration can be treated as design parameters. Compared with the conventional approach, the controller designed by the genetic algorithm results in the better performances with the realistic constraints. Also, it is found that the genetic algorithm could be used as an effective tool in the robust design. 4 refs., 6 figs. (Author)
Robust reactor power control system design by genetic algorithm
Energy Technology Data Exchange (ETDEWEB)
Lee, Yoon Joon; Cho, Kyung Ho; Kim, Sin [Cheju National University, Cheju (Korea, Republic of)
1997-12-31
The H{sub {infinity}} robust controller for the reactor power control system is designed by use of the mixed weight sensitivity. The system is configured into the typical two-port model with which the weight functions are augmented. Since the solution depends on the weighting functions and the problem is of nonconvex, the genetic algorithm is used to determine the weighting functions. The cost function applied in the genetic algorithm permits the direct control of the power tracking performances. In addition, the actual operating constraints such as rod velocity and acceleration can be treated as design parameters. Compared with the conventional approach, the controller designed by the genetic algorithm results in the better performances with the realistic constraints. Also, it is found that the genetic algorithm could be used as an effective tool in the robust design. 4 refs., 6 figs. (Author)
Research and Applications of Shop Scheduling Based on Genetic Algorithms
Directory of Open Access Journals (Sweden)
Hang ZHAO
Full Text Available ABSTRACT Shop Scheduling is an important factor affecting the efficiency of production, efficient scheduling method and a research and application for optimization technology play an important role for manufacturing enterprises to improve production efficiency, reduce production costs and many other aspects. Existing studies have shown that improved genetic algorithm has solved the limitations that existed in the genetic algorithm, the objective function is able to meet customers' needs for shop scheduling, and the future research should focus on the combination of genetic algorithm with other optimized algorithms. In this paper, in order to overcome the shortcomings of early convergence of genetic algorithm and resolve local minimization problem in search process,aiming at mixed flow shop scheduling problem, an improved cyclic search genetic algorithm is put forward, and chromosome coding method and corresponding operation are given.The operation has the nature of inheriting the optimal individual ofthe previous generation and is able to avoid the emergence of local minimum, and cyclic and crossover operation and mutation operation can enhance the diversity of the population and then quickly get the optimal individual, and the effectiveness of the algorithm is validated. Experimental results show that the improved algorithm can well avoid the emergency of local minimum and is rapid in convergence.
Kramer, Oliver
2017-01-01
This book introduces readers to genetic algorithms (GAs) with an emphasis on making the concepts, algorithms, and applications discussed as easy to understand as possible. Further, it avoids a great deal of formalisms and thus opens the subject to a broader audience in comparison to manuscripts overloaded by notations and equations. The book is divided into three parts, the first of which provides an introduction to GAs, starting with basic concepts like evolutionary operators and continuing with an overview of strategies for tuning and controlling parameters. In turn, the second part focuses on solution space variants like multimodal, constrained, and multi-objective solution spaces. Lastly, the third part briefly introduces theoretical tools for GAs, the intersections and hybridizations with machine learning, and highlights selected promising applications.
A Hybrid Genetic Algorithm Approach for Optimal Power Flow
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Sydulu Maheswarapu
2011-08-01
Full Text Available This paper puts forward a reformed hybrid genetic algorithm (GA based approach to the optimal power flow. In the approach followed here, continuous variables are designed using real-coded GA and discrete variables are processed as binary strings. The outcomes are compared with many other methods like simple genetic algorithm (GA, adaptive genetic algorithm (AGA, differential evolution (DE, particle swarm optimization (PSO and music based harmony search (MBHS on a IEEE30 bus test bed, with a total load of 283.4 MW. Its found that the proposed algorithm is found to offer lowest fuel cost. The proposed method is found to be computationally faster, robust, superior and promising form its convergence characteristics.
Genetic Algorithm Applied to the Eigenvalue Equalization Filtered-x LMS Algorithm (EE-FXLMS
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Stephan P. Lovstedt
2008-01-01
Full Text Available The FXLMS algorithm, used extensively in active noise control (ANC, exhibits frequency-dependent convergence behavior. This leads to degraded performance for time-varying tonal noise and noise with multiple stationary tones. Previous work by the authors proposed the eigenvalue equalization filtered-x least mean squares (EE-FXLMS algorithm. For that algorithm, magnitude coefficients of the secondary path transfer function are modified to decrease variation in the eigenvalues of the filtered-x autocorrelation matrix, while preserving the phase, giving faster convergence and increasing overall attenuation. This paper revisits the EE-FXLMS algorithm, using a genetic algorithm to find magnitude coefficients that give the least variation in eigenvalues. This method overcomes some of the problems with implementing the EE-FXLMS algorithm arising from finite resolution of sampled systems. Experimental control results using the original secondary path model, and a modified secondary path model for both the previous implementation of EE-FXLMS and the genetic algorithm implementation are compared.
A hybrid quantum-inspired genetic algorithm for multiobjective flow shop scheduling.
Li, Bin-Bin; Wang, Ling
2007-06-01
This paper proposes a hybrid quantum-inspired genetic algorithm (HQGA) for the multiobjective flow shop scheduling problem (FSSP), which is a typical NP-hard combinatorial optimization problem with strong engineering backgrounds. On the one hand, a quantum-inspired GA (QGA) based on Q-bit representation is applied for exploration in the discrete 0-1 hyperspace by using the updating operator of quantum gate and genetic operators of Q-bit. Moreover, random-key representation is used to convert the Q-bit representation to job permutation for evaluating the objective values of the schedule solution. On the other hand, permutation-based GA (PGA) is applied for both performing exploration in permutation-based scheduling space and stressing exploitation for good schedule solutions. To evaluate solutions in multiobjective sense, a randomly weighted linear-sum function is used in QGA, and a nondominated sorting technique including classification of Pareto fronts and fitness assignment is applied in PGA with regard to both proximity and diversity of solutions. To maintain the diversity of the population, two trimming techniques for population are proposed. The proposed HQGA is tested based on some multiobjective FSSPs. Simulation results and comparisons based on several performance metrics demonstrate the effectiveness of the proposed HQGA.
IMPLEMENTATION OF SERIAL AND PARALLEL BUBBLE SORT ON FPGA
Directory of Open Access Journals (Sweden)
Dwi Marhaendro Jati Purnomo
2016-06-01
Full Text Available Sorting is common process in computational world. Its utilization are on many fields from research to industry. There are many sorting algorithm in nowadays. One of the simplest yet powerful is bubble sort. In this study, bubble sort is implemented on FPGA. The implementation was taken on serial and parallel approach. Serial and parallel bubble sort then compared by means of its memory, execution time, and utility which comprises slices and LUTs. The experiments show that serial bubble sort required smaller memory as well as utility compared to parallel bubble sort. Meanwhile, parallel bubble sort performed faster than serial bubble sort
Reducing 4D CT artifacts using optimized sorting based on anatomic similarity.
Johnston, Eric; Diehn, Maximilian; Murphy, James D; Loo, Billy W; Maxim, Peter G
2011-05-01
Four-dimensional (4D) computed tomography (CT) has been widely used as a tool to characterize respiratory motion in radiotherapy. The two most commonly used 4D CT algorithms sort images by the associated respiratory phase or displacement into a predefined number of bins, and are prone to image artifacts at transitions between bed positions. The purpose of this work is to demonstrate a method of reducing motion artifacts in 4D CT by incorporating anatomic similarity into phase or displacement based sorting protocols. Ten patient datasets were retrospectively sorted using both the displacement and phase based sorting algorithms. Conventional sorting methods allow selection of only the nearest-neighbor image in time or displacement within each bin. In our method, for each bed position either the displacement or the phase defines the center of a bin range about which several candidate images are selected. The two dimensional correlation coefficients between slices bordering the interface between adjacent couch positions are then calculated for all candidate pairings. Two slices have a high correlation if they are anatomically similar. Candidates from each bin are then selected to maximize the slice correlation over the entire data set using the Dijkstra's shortest path algorithm. To assess the reduction of artifacts, two thoracic radiation oncologists independently compared the resorted 4D datasets pairwise with conventionally sorted datasets, blinded to the sorting method, to choose which had the least motion artifacts. Agreement between reviewers was evaluated using the weighted kappa score. Anatomically based image selection resulted in 4D CT datasets with significantly reduced motion artifacts with both displacement (P = 0.0063) and phase sorting (P = 0.00022). There was good agreement between the two reviewers, with complete agreement 34 times and complete disagreement 6 times. Optimized sorting using anatomic similarity significantly reduces 4D CT motion
Portfolio selection using genetic algorithms | Yahaya | International ...
African Journals Online (AJOL)
In this paper, one of the nature-inspired evolutionary algorithms – a Genetic Algorithms (GA) was used in solving the portfolio selection problem (PSP). Based on a real dataset from a popular stock market, the performance of the algorithm in relation to those obtained from one of the popular quadratic programming (QP) ...
Directory of Open Access Journals (Sweden)
Ho-Young Kim
2017-07-01
Full Text Available Improving the performance of power systems has become a challenging task for system operators in an open access environment. This paper presents an optimization approach for solving the multi-objective scheduling problem using a modified non-dominated sorting genetic algorithm in a hybrid network of meshed alternating current (AC/wind farm grids. This approach considers voltage and power control modes based on multi-terminal voltage source converter high-voltage direct current (MTDC and battery energy storage systems (BESS. To enhance the hybrid network station performance, we implement an optimal process based on the battery energy storage system operational strategy for multi-objective scheduling over a 24 h demand profile. Furthermore, the proposed approach is formulated as a master problem and a set of sub-problems associated with the hybrid network station to improve the overall computational efficiency using Benders’ decomposition. Based on the results of the simulations conducted on modified institute of electrical and electronics engineers (IEEE-14 bus and IEEE-118 bus test systems, we demonstrate and confirm the applicability, effectiveness and validity of the proposed approach.
Tag SNP selection via a genetic algorithm.
Mahdevar, Ghasem; Zahiri, Javad; Sadeghi, Mehdi; Nowzari-Dalini, Abbas; Ahrabian, Hayedeh
2010-10-01
Single Nucleotide Polymorphisms (SNPs) provide valuable information on human evolutionary history and may lead us to identify genetic variants responsible for human complex diseases. Unfortunately, molecular haplotyping methods are costly, laborious, and time consuming; therefore, algorithms for constructing full haplotype patterns from small available data through computational methods, Tag SNP selection problem, are convenient and attractive. This problem is proved to be an NP-hard problem, so heuristic methods may be useful. In this paper we present a heuristic method based on genetic algorithm to find reasonable solution within acceptable time. The algorithm was tested on a variety of simulated and experimental data. In comparison with the exact algorithm, based on brute force approach, results show that our method can obtain optimal solutions in almost all cases and runs much faster than exact algorithm when the number of SNP sites is large. Our software is available upon request to the corresponding author.
Cloud Computing Task Scheduling Based on Cultural Genetic Algorithm
Directory of Open Access Journals (Sweden)
Li Jian-Wen
2016-01-01
Full Text Available The task scheduling strategy based on cultural genetic algorithm(CGA is proposed in order to improve the efficiency of task scheduling in the cloud computing platform, which targets at minimizing the total time and cost of task scheduling. The improved genetic algorithm is used to construct the main population space and knowledge space under cultural framework which get independent parallel evolution, forming a mechanism of mutual promotion to dispatch the cloud task. Simultaneously, in order to prevent the defects of the genetic algorithm which is easy to fall into local optimum, the non-uniform mutation operator is introduced to improve the search performance of the algorithm. The experimental results show that CGA reduces the total time and lowers the cost of the scheduling, which is an effective algorithm for the cloud task scheduling.
Faster magnet sorting with a threshold acceptance algorithm
International Nuclear Information System (INIS)
Lidia, S.; Carr, R.
1995-01-01
We introduce here a new technique for sorting magnets to minimize the field errors in permanent magnet insertion devices. Simulated annealing has been used in this role, but we find the technique of threshold acceptance produces results of equal quality in less computer time. Threshold accepting would be of special value in designing very long insertion devices, such as long free electron lasers (FELs). Our application of threshold acceptance to magnet sorting showed that it converged to equivalently low values of the cost function, but that it converged significantly faster. We present typical cases showing time to convergence for various error tolerances, magnet numbers, and temperature schedules
Faster magnet sorting with a threshold acceptance algorithm
International Nuclear Information System (INIS)
Lidia, S.
1994-08-01
The authors introduce here a new technique for sorting magnets to minimize the field errors in permanent magnet insertion devices. Simulated annealing has been used in this role, but they find the technique of threshold acceptance produces results of equal quality in less computer time. Threshold accepting would be of special value in designing very long insertion devices, such as long FEL's. Their application of threshold acceptance to magnet sorting showed that it converged to equivalently low values of the cost function, but that it converged significantly faster. They present typical cases showing time to convergence for various error tolerances, magnet numbers, and temperature schedules
Pose estimation for augmented reality applications using genetic algorithm.
Yu, Ying Kin; Wong, Kin Hong; Chang, Michael Ming Yuen
2005-12-01
This paper describes a genetic algorithm that tackles the pose-estimation problem in computer vision. Our genetic algorithm can find the rotation and translation of an object accurately when the three-dimensional structure of the object is given. In our implementation, each chromosome encodes both the pose and the indexes to the selected point features of the object. Instead of only searching for the pose as in the existing work, our algorithm, at the same time, searches for a set containing the most reliable feature points in the process. This mismatch filtering strategy successfully makes the algorithm more robust under the presence of point mismatches and outliers in the images. Our algorithm has been tested with both synthetic and real data with good results. The accuracy of the recovered pose is compared to the existing algorithms. Our approach outperformed the Lowe's method and the other two genetic algorithms under the presence of point mismatches and outliers. In addition, it has been used to estimate the pose of a real object. It is shown that the proposed method is applicable to augmented reality applications.
Solving the SAT problem using Genetic Algorithm
Directory of Open Access Journals (Sweden)
Arunava Bhattacharjee
2017-08-01
Full Text Available In this paper we propose our genetic algorithm for solving the SAT problem. We introduce various crossover and mutation techniques and then make a comparative analysis between them in order to find out which techniques are the best suited for solving a SAT instance. Before the genetic algorithm is applied to an instance it is better to seek for unit and pure literals in the given formula and then try to eradicate them. This can considerably reduce the search space, and to demonstrate this we tested our algorithm on some random SAT instances. However, to analyse the various crossover and mutation techniques and also to evaluate the optimality of our algorithm we performed extensive experiments on benchmark instances of the SAT problem. We also estimated the ideal crossover length that would maximise the chances to solve a given SAT instance.
Sorting signed permutations by short operations.
Galvão, Gustavo Rodrigues; Lee, Orlando; Dias, Zanoni
2015-01-01
During evolution, global mutations may alter the order and the orientation of the genes in a genome. Such mutations are referred to as rearrangement events, or simply operations. In unichromosomal genomes, the most common operations are reversals, which are responsible for reversing the order and orientation of a sequence of genes, and transpositions, which are responsible for switching the location of two contiguous portions of a genome. The problem of computing the minimum sequence of operations that transforms one genome into another - which is equivalent to the problem of sorting a permutation into the identity permutation - is a well-studied problem that finds application in comparative genomics. There are a number of works concerning this problem in the literature, but they generally do not take into account the length of the operations (i.e. the number of genes affected by the operations). Since it has been observed that short operations are prevalent in the evolution of some species, algorithms that efficiently solve this problem in the special case of short operations are of interest. In this paper, we investigate the problem of sorting a signed permutation by short operations. More precisely, we study four flavors of this problem: (i) the problem of sorting a signed permutation by reversals of length at most 2; (ii) the problem of sorting a signed permutation by reversals of length at most 3; (iii) the problem of sorting a signed permutation by reversals and transpositions of length at most 2; and (iv) the problem of sorting a signed permutation by reversals and transpositions of length at most 3. We present polynomial-time solutions for problems (i) and (iii), a 5-approximation for problem (ii), and a 3-approximation for problem (iv). Moreover, we show that the expected approximation ratio of the 5-approximation algorithm is not greater than 3 for random signed permutations with more than 12 elements. Finally, we present experimental results that show
Optimal Design of Passive Power Filters Based on Pseudo-parallel Genetic Algorithm
Li, Pei; Li, Hongbo; Gao, Nannan; Niu, Lin; Guo, Liangfeng; Pei, Ying; Zhang, Yanyan; Xu, Minmin; Chen, Kerui
2017-05-01
The economic costs together with filter efficiency are taken as targets to optimize the parameter of passive filter. Furthermore, the method of combining pseudo-parallel genetic algorithm with adaptive genetic algorithm is adopted in this paper. In the early stages pseudo-parallel genetic algorithm is introduced to increase the population diversity, and adaptive genetic algorithm is used in the late stages to reduce the workload. At the same time, the migration rate of pseudo-parallel genetic algorithm is improved to change with population diversity adaptively. Simulation results show that the filter designed by the proposed method has better filtering effect with lower economic cost, and can be used in engineering.
On the Structure of a Best Possible Crossover Selection Strategy in Genetic Algorithms
Lässig, Jörg; Hoffmann, Karl Heinz
The paper considers the problem of selecting individuals in the current population in genetic algorithms for crossover to find a solution with high fitness for a given optimization problem. Many different schemes have been described in the literature as possible strategies for this task but so far comparisons have been predominantly empirical. It is shown that if one wishes to maximize any linear function of the final state probabilities, e.g. the fitness of the best individual in the final population of the algorithm, then a best probability distribution for selecting an individual in each generation is a rectangular distribution over the individuals sorted in descending sequence by their fitness values. This means uniform probabilities have to be assigned to a group of the best individuals of the population but probabilities equal to zero to individuals with lower fitness, assuming that the probability distribution to choose individuals from the current population can be chosen independently for each iteration and each individual. This result is then generalized also to typical practically applied performance measures, such as maximizing the expected fitness value of the best individual seen in any generation.
Heuristic framework for parallel sorting computations | Nwanze ...
African Journals Online (AJOL)
Parallel sorting techniques have become of practical interest with the advent of new multiprocessor architectures. The decreasing cost of these processors will probably in the future, make the solutions that are derived thereof to be more appealing. Efficient algorithms for sorting scheme that are encountered in a number of ...
Savsani, Vimal; Patel, Vivek; Gadhvi, Bhargav; Tawhid, Mohamed
2017-01-01
Most of the modern multiobjective optimization algorithms are based on the search technique of genetic algorithms; however the search techniques of other recently developed metaheuristics are emerging topics among researchers. This paper proposes a novel multiobjective optimization algorithm named multiobjective heat transfer search (MOHTS) algorithm, which is based on the search technique of heat transfer search (HTS) algorithm. MOHTS employs the elitist nondominated sorting and crowding dis...
Genetic algorithms with memory- and elitism-based immigrants in dynamic environments.
Yang, Shengxiang
2008-01-01
In recent years the genetic algorithm community has shown a growing interest in studying dynamic optimization problems. Several approaches have been devised. The random immigrants and memory schemes are two major ones. The random immigrants scheme addresses dynamic environments by maintaining the population diversity while the memory scheme aims to adapt genetic algorithms quickly to new environments by reusing historical information. This paper investigates a hybrid memory and random immigrants scheme, called memory-based immigrants, and a hybrid elitism and random immigrants scheme, called elitism-based immigrants, for genetic algorithms in dynamic environments. In these schemes, the best individual from memory or the elite from the previous generation is retrieved as the base to create immigrants into the population by mutation. This way, not only can diversity be maintained but it is done more efficiently to adapt genetic algorithms to the current environment. Based on a series of systematically constructed dynamic problems, experiments are carried out to compare genetic algorithms with the memory-based and elitism-based immigrants schemes against genetic algorithms with traditional memory and random immigrants schemes and a hybrid memory and multi-population scheme. The sensitivity analysis regarding some key parameters is also carried out. Experimental results show that the memory-based and elitism-based immigrants schemes efficiently improve the performance of genetic algorithms in dynamic environments.
A pipelined FPGA implementation of an encryption algorithm based on genetic algorithm
Thirer, Nonel
2013-05-01
With the evolution of digital data storage and exchange, it is essential to protect the confidential information from every unauthorized access. High performance encryption algorithms were developed and implemented by software and hardware. Also many methods to attack the cipher text were developed. In the last years, the genetic algorithm has gained much interest in cryptanalysis of cipher texts and also in encryption ciphers. This paper analyses the possibility to use the genetic algorithm as a multiple key sequence generator for an AES (Advanced Encryption Standard) cryptographic system, and also to use a three stages pipeline (with four main blocks: Input data, AES Core, Key generator, Output data) to provide a fast encryption and storage/transmission of a large amount of data.
Directory of Open Access Journals (Sweden)
M. Balasubbareddy
2015-12-01
Full Text Available A novel optimization algorithm is proposed to solve single and multi-objective optimization problems with generation fuel cost, emission, and total power losses as objectives. The proposed method is a hybridization of the conventional cuckoo search algorithm and arithmetic crossover operations. Thus, the non-linear, non-convex objective function can be solved under practical constraints. The effectiveness of the proposed algorithm is analyzed for various cases to illustrate the effect of practical constraints on the objectives' optimization. Two and three objective multi-objective optimization problems are formulated and solved using the proposed non-dominated sorting-based hybrid cuckoo search algorithm. The effectiveness of the proposed method in confining the Pareto front solutions in the solution region is analyzed. The results for single and multi-objective optimization problems are physically interpreted on standard test functions as well as the IEEE-30 bus test system with supporting numerical and graphical results and also validated against existing methods.
Evacuation route planning during nuclear emergency using genetic algorithm
International Nuclear Information System (INIS)
Suman, Vitisha; Sarkar, P.K.
2012-01-01
In nuclear industry the routing in case of any emergency is a cause of concern and of great importance. Even the smallest of time saved in the affected region saves a huge amount of otherwise received dose. Genetic algorithm an optimization technique has great ability to search for the optimal path from the affected region to a destination station in a spatially addressed problem. Usually heuristic algorithms are used to carry out these types of search strategy, but due to the lack of global sampling in the feasible solution space, these algorithms have considerable possibility of being trapped into local optima. Routing problems mainly are search problems for finding the shortest distance within a time limit to cover the required number of stations taking care of the traffics, road quality, population size etc. Lack of any formal mechanisms to help decision-makers explore the solution space of their problem and thereby challenges their assumptions about the number and range of options available. The Genetic Algorithm provides a way to optimize a multi-parameter constrained problem with an ease. Here use of Genetic Algorithm to generate a range of options available and to search a solution space and selectively focus on promising combinations of criteria makes them ideally suited to such complex spatial decision problems. The emergency response and routing can be made efficient, in accessing the closest facilities and determining the shortest route using genetic algorithm. The accuracy and care in creating database can be used to improve the result of the final output. The Genetic algorithm can be used to improve the accuracy of result on the basis of distance where other algorithm cannot be obtained. The search space can be utilized to its great extend
Time-Delay System Identification Using Genetic Algorithm
DEFF Research Database (Denmark)
Yang, Zhenyu; Seested, Glen Thane
2013-01-01
Due to the unknown dead-time coefficient, the time-delay system identification turns to be a non-convex optimization problem. This paper investigates the identification of a simple time-delay system, named First-Order-Plus-Dead-Time (FOPDT), by using the Genetic Algorithm (GA) technique. The qual......Due to the unknown dead-time coefficient, the time-delay system identification turns to be a non-convex optimization problem. This paper investigates the identification of a simple time-delay system, named First-Order-Plus-Dead-Time (FOPDT), by using the Genetic Algorithm (GA) technique...
Medical image segmentation using genetic algorithms.
Maulik, Ujjwal
2009-03-01
Genetic algorithms (GAs) have been found to be effective in the domain of medical image segmentation, since the problem can often be mapped to one of search in a complex and multimodal landscape. The challenges in medical image segmentation arise due to poor image contrast and artifacts that result in missing or diffuse organ/tissue boundaries. The resulting search space is therefore often noisy with a multitude of local optima. Not only does the genetic algorithmic framework prove to be effective in coming out of local optima, it also brings considerable flexibility into the segmentation procedure. In this paper, an attempt has been made to review the major applications of GAs to the domain of medical image segmentation.
Genetic Optimization Algorithm for Metabolic Engineering Revisited
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Tobias B. Alter
2018-05-01
Full Text Available To date, several independent methods and algorithms exist for exploiting constraint-based stoichiometric models to find metabolic engineering strategies that optimize microbial production performance. Optimization procedures based on metaheuristics facilitate a straightforward adaption and expansion of engineering objectives, as well as fitness functions, while being particularly suited for solving problems of high complexity. With the increasing interest in multi-scale models and a need for solving advanced engineering problems, we strive to advance genetic algorithms, which stand out due to their intuitive optimization principles and the proven usefulness in this field of research. A drawback of genetic algorithms is that premature convergence to sub-optimal solutions easily occurs if the optimization parameters are not adapted to the specific problem. Here, we conducted comprehensive parameter sensitivity analyses to study their impact on finding optimal strain designs. We further demonstrate the capability of genetic algorithms to simultaneously handle (i multiple, non-linear engineering objectives; (ii the identification of gene target-sets according to logical gene-protein-reaction associations; (iii minimization of the number of network perturbations; and (iv the insertion of non-native reactions, while employing genome-scale metabolic models. This framework adds a level of sophistication in terms of strain design robustness, which is exemplarily tested on succinate overproduction in Escherichia coli.
Multi-Objective Optimization Design for a Hybrid Energy System Using the Genetic Algorithm
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Myeong Jin Ko
2015-04-01
Full Text Available To secure a stable energy supply and bring renewable energy to buildings within a reasonable cost range, a hybrid energy system (HES that integrates both fossil fuel energy systems (FFESs and new and renewable energy systems (NRESs needs to be designed and applied. This paper presents a methodology to optimize a HES consisting of three types of NRESs and six types of FFESs while simultaneously minimizing life cycle cost (LCC, maximizing penetration of renewable energy and minimizing annual greenhouse gas (GHG emissions. An elitist non-dominated sorting genetic algorithm is utilized for multi-objective optimization. As an example, we have designed the optimal configuration and sizing for a HES in an elementary school. The evolution of Pareto-optimal solutions according to the variation in the economic, technical and environmental objective functions through generations is discussed. The pair wise trade-offs among the three objectives are also examined.
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Kumar Deepak
2015-12-01
Full Text Available Groundwater contamination due to leakage of gasoline is one of the several causes which affect the groundwater environment by polluting it. In the past few years, In-situ bioremediation has attracted researchers because of its ability to remediate the contaminant at its site with low cost of remediation. This paper proposed the use of a new hybrid algorithm to optimize a multi-objective function which includes the cost of remediation as the first objective and residual contaminant at the end of the remediation period as the second objective. The hybrid algorithm was formed by combining the methods of Differential Evolution, Genetic Algorithms and Simulated Annealing. Support Vector Machines (SVM was used as a virtual simulator for biodegradation of contaminants in the groundwater flow. The results obtained from the hybrid algorithm were compared with Differential Evolution (DE, Non Dominated Sorting Genetic Algorithm (NSGA II and Simulated Annealing (SA. It was found that the proposed hybrid algorithm was capable of providing the best solution. Fuzzy logic was used to find the best compromising solution and finally a pumping rate strategy for groundwater remediation was presented for the best compromising solution. The results show that the cost incurred for the best compromising solution is intermediate between the highest and lowest cost incurred for other non-dominated solutions.
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Georgii N. Lebedev
2017-01-01
Full Text Available The improvement in the effectiveness of airfield operation largely depends on the problem solving quality on the interaction boundaries of different technological sections. One of such hotspots is the use of the same runway by inbound and outbound aircraft. At certain intensity of outbound and inbound air traffic flow the conflict of aircraft interests appears, where it may be quite difficult to sort out priorities even for experienced controllers, in consequence of which mistakes in decision-making unavoidably appear.In this work the task of response correction of landing and takeoff time of the aircraft using the same RW, in condition of the conflict of interests “arrival – departure” at the increased operating intensity is formulated. The choice of optimal solution is made taking into account mutual interests without the complete sorting and the evaluation of all solutions.Accordingly, the genetic algorithm, which offers a simple and effective approach to optimal control problem solution by providing flight safety at an acceptably high level, is proposed. The estimation of additional aviation fuel consumption is used as optimal choice evaluation criterion.The advantages of the genetic algorithm application at decision-making in comparison with today’s “team” solution of the conflict “departure – arrival” in the airfield area are shown.
Optimization-Based Image Segmentation by Genetic Algorithms
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Rosenberger C
2008-01-01
Full Text Available Abstract Many works in the literature focus on the definition of evaluation metrics and criteria that enable to quantify the performance of an image processing algorithm. These evaluation criteria can be used to define new image processing algorithms by optimizing them. In this paper, we propose a general scheme to segment images by a genetic algorithm. The developed method uses an evaluation criterion which quantifies the quality of an image segmentation result. The proposed segmentation method can integrate a local ground truth when it is available in order to set the desired level of precision of the final result. A genetic algorithm is then used in order to determine the best combination of information extracted by the selected criterion. Then, we show that this approach can either be applied for gray-levels or multicomponents images in a supervised context or in an unsupervised one. Last, we show the efficiency of the proposed method through some experimental results on several gray-levels and multicomponents images.
Optimization-Based Image Segmentation by Genetic Algorithms
Directory of Open Access Journals (Sweden)
H. Laurent
2008-05-01
Full Text Available Many works in the literature focus on the definition of evaluation metrics and criteria that enable to quantify the performance of an image processing algorithm. These evaluation criteria can be used to define new image processing algorithms by optimizing them. In this paper, we propose a general scheme to segment images by a genetic algorithm. The developed method uses an evaluation criterion which quantifies the quality of an image segmentation result. The proposed segmentation method can integrate a local ground truth when it is available in order to set the desired level of precision of the final result. A genetic algorithm is then used in order to determine the best combination of information extracted by the selected criterion. Then, we show that this approach can either be applied for gray-levels or multicomponents images in a supervised context or in an unsupervised one. Last, we show the efficiency of the proposed method through some experimental results on several gray-levels and multicomponents images.
First results of genetic algorithm application in ML image reconstruction in emission tomography
International Nuclear Information System (INIS)
Smolik, W.
1999-01-01
This paper concerns application of genetic algorithm in maximum likelihood image reconstruction in emission tomography. The example of genetic algorithm for image reconstruction is presented. The genetic algorithm was based on the typical genetic scheme modified due to the nature of solved problem. The convergence of algorithm was examined. The different adaption functions, selection and crossover methods were verified. The algorithm was tested on simulated SPECT data. The obtained results of image reconstruction are discussed. (author)
Genetic algorithm approach to thin film optical parameters determination
International Nuclear Information System (INIS)
Jurecka, S.; Jureckova, M.; Muellerova, J.
2003-01-01
Optical parameters of thin film are important for several optical and optoelectronic applications. In this work the genetic algorithm proposed to solve optical parameters of thin film values. The experimental reflectance is modelled by the Forouhi - Bloomer dispersion relations. The refractive index, the extinction coefficient and the film thickness are the unknown parameters in this model. Genetic algorithm use probabilistic examination of promissing areas of the parameter space. It creates a population of solutions based on the reflectance model and then operates on the population to evolve the best solution by using selection, crossover and mutation operators on the population individuals. The implementation of genetic algorithm method and the experimental results are described too (Authors)
An Improved Chaos Genetic Algorithm for T-Shaped MIMO Radar Antenna Array Optimization
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Xin Fu
2014-01-01
Full Text Available In view of the fact that the traditional genetic algorithm easily falls into local optimum in the late iterations, an improved chaos genetic algorithm employed chaos theory and genetic algorithm is presented to optimize the low side-lobe for T-shaped MIMO radar antenna array. The novel two-dimension Cat chaotic map has been put forward to produce its initial population, improving the diversity of individuals. The improved Tent map is presented for groups of individuals of a generation with chaos disturbance. Improved chaotic genetic algorithm optimization model is established. The algorithm presented in this paper not only improved the search precision, but also avoids effectively the problem of local convergence and prematurity. For MIMO radar, the improved chaos genetic algorithm proposed in this paper obtains lower side-lobe level through optimizing the exciting current amplitude. Simulation results show that the algorithm is feasible and effective. Its performance is superior to the traditional genetic algorithm.
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Ali Gerami Matin
2017-10-01
Full Text Available Optimized road maintenance planning seeks for solutions that can minimize the life-cycle cost of a road network and concurrently maximize pavement condition. Aiming at proposing an optimal set of road maintenance solutions, robust meta-heuristic algorithms are used in research. Two main optimization techniques are applied including single-objective and multi-objective optimization. Genetic algorithms (GA, particle swarm optimization (PSO, and combination of genetic algorithm and particle swarm optimization (GAPSO as single-objective techniques are used, while the non-domination sorting genetic algorithm II (NSGAII and multi-objective particle swarm optimization (MOPSO which are sufficient for solving computationally complex large-size optimization problems as multi-objective techniques are applied and compared. A real case study from the rural transportation network of Iran is employed to illustrate the sufficiency of the optimum algorithm. The formulation of the optimization model is carried out in such a way that a cost-effective maintenance strategy is reached by preserving the performance level of the road network at a desirable level. So, the objective functions are pavement performance maximization and maintenance cost minimization. It is concluded that multi-objective algorithms including non-domination sorting genetic algorithm II (NSGAII and multi-objective particle swarm optimization performed better than the single objective algorithms due to the capability to balance between both objectives. And between multi-objective algorithms the NSGAII provides the optimum solution for the road maintenance planning.
A multiple objective magnet sorting algorithm for the Advanced Light Source insertion devices
International Nuclear Information System (INIS)
Humphries, D.; Goetz, F.; Kownacki, P.; Marks, S.; Schlueter, R.
1995-01-01
Insertion devices for the Advanced Light Source (ALS) incorporate large numbers of permanent magnets which have a variety of magnetization orientation errors. These orientation errors can produce field errors which affect both the spectral brightness of the insertion devices and the storage ring electron beam dynamics. A perturbation study was carried out to quantify the effects of orientation errors acting in a hybrid magnetic structure. The results of this study were used to develop a multiple stage sorting algorithm which minimizes undesirable integrated field errors and essentially eliminates pole excitation errors. When applied to a measured magnet population for an existing insertion device, an order of magnitude reduction in integrated field errors was achieved while maintaining near zero pole excitation errors
Portfolio optimization by using linear programing models based on genetic algorithm
Sukono; Hidayat, Y.; Lesmana, E.; Putra, A. S.; Napitupulu, H.; Supian, S.
2018-01-01
In this paper, we discussed the investment portfolio optimization using linear programming model based on genetic algorithms. It is assumed that the portfolio risk is measured by absolute standard deviation, and each investor has a risk tolerance on the investment portfolio. To complete the investment portfolio optimization problem, the issue is arranged into a linear programming model. Furthermore, determination of the optimum solution for linear programming is done by using a genetic algorithm. As a numerical illustration, we analyze some of the stocks traded on the capital market in Indonesia. Based on the analysis, it is shown that the portfolio optimization performed by genetic algorithm approach produces more optimal efficient portfolio, compared to the portfolio optimization performed by a linear programming algorithm approach. Therefore, genetic algorithms can be considered as an alternative on determining the investment portfolio optimization, particularly using linear programming models.
Directory of Open Access Journals (Sweden)
Vimal Savsani
2017-01-01
Full Text Available Most of the modern multiobjective optimization algorithms are based on the search technique of genetic algorithms; however the search techniques of other recently developed metaheuristics are emerging topics among researchers. This paper proposes a novel multiobjective optimization algorithm named multiobjective heat transfer search (MOHTS algorithm, which is based on the search technique of heat transfer search (HTS algorithm. MOHTS employs the elitist nondominated sorting and crowding distance approach of an elitist based nondominated sorting genetic algorithm-II (NSGA-II for obtaining different nondomination levels and to preserve the diversity among the optimal set of solutions, respectively. The capability in yielding a Pareto front as close as possible to the true Pareto front of MOHTS has been tested on the multiobjective optimization problem of the vehicle suspension design, which has a set of five second-order linear ordinary differential equations. Half car passive ride model with two different sets of five objectives is employed for optimizing the suspension parameters using MOHTS and NSGA-II. The optimization studies demonstrate that MOHTS achieves the better nondominated Pareto front with the widespread (diveresed set of optimal solutions as compared to NSGA-II, and further the comparison of the extreme points of the obtained Pareto front reveals the dominance of MOHTS over NSGA-II, multiobjective uniform diversity genetic algorithm (MUGA, and combined PSO-GA based MOEA.
Genetic algorithms and their use in Geophysical Problems
Energy Technology Data Exchange (ETDEWEB)
Parker, Paul B. [Univ. of California, Berkeley, CA (United States)
1999-04-01
Genetic algorithms (GAs), global optimization methods that mimic Darwinian evolution are well suited to the nonlinear inverse problems of geophysics. A standard genetic algorithm selects the best or ''fittest'' models from a ''population'' and then applies operators such as crossover and mutation in order to combine the most successful characteristics of each model and produce fitter models. More sophisticated operators have been developed, but the standard GA usually provides a robust and efficient search. Although the choice of parameter settings such as crossover and mutation rate may depend largely on the type of problem being solved, numerous results show that certain parameter settings produce optimal performance for a wide range of problems and difficulties. In particular, a low (about half of the inverse of the population size) mutation rate is crucial for optimal results, but the choice of crossover method and rate do not seem to affect performance appreciably. Optimal efficiency is usually achieved with smaller (< 50) populations. Lastly, tournament selection appears to be the best choice of selection methods due to its simplicity and its autoscaling properties. However, if a proportional selection method is used such as roulette wheel selection, fitness scaling is a necessity, and a high scaling factor (> 2.0) should be used for the best performance. Three case studies are presented in which genetic algorithms are used to invert for crustal parameters. The first is an inversion for basement depth at Yucca mountain using gravity data, the second an inversion for velocity structure in the crust of the south island of New Zealand using receiver functions derived from teleseismic events, and the third is a similar receiver function inversion for crustal velocities beneath the Mendocino Triple Junction region of Northern California. The inversions demonstrate that genetic algorithms are effective in solving problems
Application of genetic algorithms for parameter estimation in liquid chromatography
International Nuclear Information System (INIS)
Hernandez Torres, Reynier; Irizar Mesa, Mirtha; Tavares Camara, Leoncio Diogenes
2012-01-01
In chromatography, complex inverse problems related to the parameters estimation and process optimization are presented. Metaheuristics methods are known as general purpose approximated algorithms which seek and hopefully find good solutions at a reasonable computational cost. These methods are iterative process to perform a robust search of a solution space. Genetic algorithms are optimization techniques based on the principles of genetics and natural selection. They have demonstrated very good performance as global optimizers in many types of applications, including inverse problems. In this work, the effectiveness of genetic algorithms is investigated to estimate parameters in liquid chromatography
Application of mapping crossover genetic algorithm in nuclear power equipment optimization design
International Nuclear Information System (INIS)
Li Guijiang; Yan Changqi; Wang Jianjun; Liu Chengyang
2013-01-01
Genetic algorithm (GA) has been widely applied in nuclear engineering. An improved method, named the mapping crossover genetic algorithm (MCGA), was developed aiming at improving the shortcomings of traditional genetic algorithm (TGA). The optimal results of benchmark problems show that MCGA has better optimizing performance than TGA. MCGA was applied to the reactor coolant pump optimization design. (authors)
Bio-Inspired Genetic Algorithms with Formalized Crossover Operators for Robotic Applications.
Zhang, Jie; Kang, Man; Li, Xiaojuan; Liu, Geng-Yang
2017-01-01
Genetic algorithms are widely adopted to solve optimization problems in robotic applications. In such safety-critical systems, it is vitally important to formally prove the correctness when genetic algorithms are applied. This paper focuses on formal modeling of crossover operations that are one of most important operations in genetic algorithms. Specially, we for the first time formalize crossover operations with higher-order logic based on HOL4 that is easy to be deployed with its user-friendly programing environment. With correctness-guaranteed formalized crossover operations, we can safely apply them in robotic applications. We implement our technique to solve a path planning problem using a genetic algorithm with our formalized crossover operations, and the results show the effectiveness of our technique.
Unified selective sorting approach to analyse multi-electrode extracellular data
Veerabhadrappa, R.; Lim, C. P.; Nguyen, T. T.; Berk, M.; Tye, S. J.; Monaghan, P.; Nahavandi, S.; Bhatti, A.
2016-01-01
Extracellular data analysis has become a quintessential method for understanding the neurophysiological responses to stimuli. This demands stringent techniques owing to the complicated nature of the recording environment. In this paper, we highlight the challenges in extracellular multi-electrode recording and data analysis as well as the limitations pertaining to some of the currently employed methodologies. To address some of the challenges, we present a unified algorithm in the form of selective sorting. Selective sorting is modelled around hypothesized generative model, which addresses the natural phenomena of spikes triggered by an intricate neuronal population. The algorithm incorporates Cepstrum of Bispectrum, ad hoc clustering algorithms, wavelet transforms, least square and correlation concepts which strategically tailors a sequence to characterize and form distinctive clusters. Additionally, we demonstrate the influence of noise modelled wavelets to sort overlapping spikes. The algorithm is evaluated using both raw and synthesized data sets with different levels of complexity and the performances are tabulated for comparison using widely accepted qualitative and quantitative indicators. PMID:27339770
Application of Hybrid Genetic Algorithm Routine in Optimizing Food and Bioengineering Processes
Directory of Open Access Journals (Sweden)
Jaya Shankar Tumuluru
2016-11-01
Full Text Available Optimization is a crucial step in the analysis of experimental results. Deterministic methods only converge on local optimums and require exponentially more time as dimensionality increases. Stochastic algorithms are capable of efficiently searching the domain space; however convergence is not guaranteed. This article demonstrates the novelty of the hybrid genetic algorithm (HGA, which combines both stochastic and deterministic routines for improved optimization results. The new hybrid genetic algorithm developed is applied to the Ackley benchmark function as well as case studies in food, biofuel, and biotechnology processes. For each case study, the hybrid genetic algorithm found a better optimum candidate than reported by the sources. In the case of food processing, the hybrid genetic algorithm improved the anthocyanin yield by 6.44%. Optimization of bio-oil production using HGA resulted in a 5.06% higher yield. In the enzyme production process, HGA predicted a 0.39% higher xylanase yield. Hybridization of the genetic algorithm with a deterministic algorithm resulted in an improved optimum compared to statistical methods.
Vorozheikin, A.; Gonchar, T.; Panfilov, I.; Sopov, E.; Sopov, S.
2009-01-01
A new algorithm for the solution of complex constrained optimization problems based on the probabilistic genetic algorithm with optimal solution prediction is proposed. The efficiency investigation results in comparison with standard genetic algorithm are presented.
Sorting Real Numbers in $O(n\\sqrt{\\log n})$ Time and Linear Space
Han, Yijie
2017-01-01
We present an $O(n\\sqrt{\\log n})$ time and linear space algorithm for sorting real numbers. This breaks the long time illusion that real numbers have to be sorted by comparison sorting and take $\\Omega (n\\log n)$ time to be sorted.
Genetic algorithm based on qubits and quantum gates
International Nuclear Information System (INIS)
Silva, Joao Batista Rosa; Ramos, Rubens Viana
2003-01-01
Full text: Genetic algorithm, a computational technique based on the evolution of the species, in which a possible solution of the problem is coded in a binary string, called chromosome, has been used successfully in several kinds of problems, where the search of a minimal or a maximal value is necessary, even when local minima are present. A natural generalization of a binary string is a qubit string. Hence, it is possible to use the structure of a genetic algorithm having a sequence of qubits as a chromosome and using quantum operations in the reproduction in order to find the best solution in some problems of quantum information. For example, given a unitary matrix U what is the pair of qubits that, when applied at the input, provides the output state with maximal entanglement? In order to solve this problem, a population of chromosomes of two qubits was created. The crossover was performed applying the quantum gates CNOT and SWAP at the pair of qubits, while the mutation was performed applying the quantum gates Hadamard, Z and Not in a single qubit. The result was compared with a classical genetic algorithm used to solve the same problem. A hundred simulations using the same U matrix was performed. Both algorithms, hereafter named by CGA (classical) and QGA (using qu bits), reached good results close to 1 however, the number of generations needed to find the best result was lower for the QGA. Another problem where the QGA can be useful is in the calculation of the relative entropy of entanglement. We have tested our algorithm using 100 pure states chosen randomly. The stop criterion used was the error lower than 0.01. The main advantages of QGA are its good precision, robustness and very easy implementation. The main disadvantage is its low velocity, as happen for all kind of genetic algorithms. (author)
A "Hands on" Strategy for Teaching Genetic Algorithms to Undergraduates
Venables, Anne; Tan, Grace
2007-01-01
Genetic algorithms (GAs) are a problem solving strategy that uses stochastic search. Since their introduction (Holland, 1975), GAs have proven to be particularly useful for solving problems that are "intractable" using classical methods. The language of genetic algorithms (GAs) is heavily laced with biological metaphors from evolutionary…
Genetic algorithms applied to the nuclear power plant operation
International Nuclear Information System (INIS)
Schirru, R.; Martinez, A.S.; Pereira, C.M.N.A.
2000-01-01
Nuclear power plant operation often involves very important human decisions, such as actions to be taken after a nuclear accident/transient, or finding the best core reload pattern, a complex combinatorial optimization problem which requires expert knowledge. Due to the complexity involved in the decisions to be taken, computerized systems have been intensely explored in order to aid the operator. Following hardware advances, soft computing has been improved and, nowadays, intelligent technologies, such as genetic algorithms, neural networks and fuzzy systems, are being used to support operator decisions. In this chapter two main problems are explored: transient diagnosis and nuclear core refueling. Here, solutions to such kind of problems, based on genetic algorithms, are described. A genetic algorithm was designed to optimize the nuclear fuel reload of Angra-1 nuclear power plant. Results compared to those obtained by an expert reveal a gain in the burn-up cycle. Two other genetic algorithm approaches were used to optimize real time diagnosis systems. The first one learns partitions in the time series that represents the transients, generating a set of classification centroids. The other one involves the optimization of an adaptive vector quantization neural network. Results are shown and commented. (orig.)
Warehouse stocking optimization based on dynamic ant colony genetic algorithm
Xiao, Xiaoxu
2018-04-01
In view of the various orders of FAW (First Automotive Works) International Logistics Co., Ltd., the SLP method is used to optimize the layout of the warehousing units in the enterprise, thus the warehouse logistics is optimized and the external processing speed of the order is improved. In addition, the relevant intelligent algorithms for optimizing the stocking route problem are analyzed. The ant colony algorithm and genetic algorithm which have good applicability are emphatically studied. The parameters of ant colony algorithm are optimized by genetic algorithm, which improves the performance of ant colony algorithm. A typical path optimization problem model is taken as an example to prove the effectiveness of parameter optimization.
Directory of Open Access Journals (Sweden)
Bian Changzhi
2015-01-01
Full Text Available This paper addresses the multiobjective discrete network design problem under demand uncertainty. The OD travel demands are supposed to be random variables with the given probability distribution. The problem is formulated as a bilevel stochastic optimization model where the decision maker’s objective is to minimize the construction cost, the expectation, and the standard deviation of total travel time simultaneously and the user’s route choice is described using user equilibrium model on the improved network under all scenarios of uncertain demand. The proposed model generates globally near-optimal Pareto solutions for network configurations based on the Monte Carlo simulation and nondominated sorting genetic algorithms II. Numerical experiments implemented on Nguyen-Dupuis test network show trade-offs among construction cost, the expectation, and standard deviation of total travel time under uncertainty are obvious. Investment on transportation facilities is an efficient method to improve the network performance and reduce risk under demand uncertainty, but it has an obvious marginal decreasing effect.
Dynamic traffic assignment : genetic algorithms approach
1997-01-01
Real-time route guidance is a promising approach to alleviating congestion on the nations highways. A dynamic traffic assignment model is central to the development of guidance strategies. The artificial intelligence technique of genetic algorithm...
Cellular Genetic Algorithm with Communicating Grids for Assembly Line Balancing Problems
Directory of Open Access Journals (Sweden)
BRUDARU, O.
2010-05-01
Full Text Available This paper presents a new approach with cellular multigrid genetic algorithms for the "I"-shaped and "U"-shaped assembly line balancing problems, including parallel workstations and compatibility constraints. First, a cellular hybrid genetic algorithm that uses a single grid is described. Appropriate operators for mutation, hypermutation, and crossover and two devoration techniques are proposed for creating and maintaining groups based on similarity. This monogrid algorithm is extended for handling many populations placed on different grids. In the multigrid version, the population of each grid is organized in clusters using the positional information of the chromosomes. A similarity preserving communication protocol between the clusters placed on different grids is introduced. The experimental evaluation shows that the multigrid cellular genetic algorithm with communicating grids is better than the hybrid genetic algorithm used for building it, whereas it dominates the monogrid version in all cases. Absolute performance is evaluated using classical benchmarks. The role of certain components of the cellular algorithm is explained and the effect of some parameters is evaluated.
Experimental Performance of a Genetic Algorithm for Airborne Strategic Conflict Resolution
Karr, David A.; Vivona, Robert A.; Roscoe, David A.; DePascale, Stephen M.; Consiglio, Maria
2009-01-01
The Autonomous Operations Planner, a research prototype flight-deck decision support tool to enable airborne self-separation, uses a pattern-based genetic algorithm to resolve predicted conflicts between the ownship and traffic aircraft. Conflicts are resolved by modifying the active route within the ownship's flight management system according to a predefined set of maneuver pattern templates. The performance of this pattern-based genetic algorithm was evaluated in the context of batch-mode Monte Carlo simulations running over 3600 flight hours of autonomous aircraft in en-route airspace under conditions ranging from typical current traffic densities to several times that level. Encountering over 8900 conflicts during two simulation experiments, the genetic algorithm was able to resolve all but three conflicts, while maintaining a required time of arrival constraint for most aircraft. Actual elapsed running time for the algorithm was consistent with conflict resolution in real time. The paper presents details of the genetic algorithm's design, along with mathematical models of the algorithm's performance and observations regarding the effectiveness of using complimentary maneuver patterns when multiple resolutions by the same aircraft were required.
Application of Genetic Algorithms in Seismic Tomography
Soupios, Pantelis; Akca, Irfan; Mpogiatzis, Petros; Basokur, Ahmet; Papazachos, Constantinos
2010-05-01
In the earth sciences several inverse problems that require data fitting and parameter estimation are nonlinear and can involve a large number of unknown parameters. Consequently, the application of analytical inversion or optimization techniques may be quite restrictive. In practice, most analytical methods are local in nature and rely on a linearized form of the problem in question, adopting an iterative procedure using partial derivatives to improve an initial model. This approach can lead to a dependence of the final model solution on the starting model and is prone to entrapment in local misfit minima. Moreover, the calculation of derivatives can be computationally inefficient and create instabilities when numerical approximations are used. In contrast to these local minimization methods, global techniques that do not rely on partial derivatives, are independent of the form of the data misfit criterion, and are computationally robust. Such methods often use random processes to sample a selected wider span of the model space. In this situation, randomly generated models are assessed in terms of their data-fitting quality and the process may be stopped after a certain number of acceptable models is identified or continued until a satisfactory data fit is achieved. A new class of methods known as genetic algorithms achieves the aforementioned approximation through novel model representation and manipulations. Genetic algorithms (GAs) were originally developed in the field of artificial intelligence by John Holland more than 20 years ago, but even in this field it is less than a decade that the methodology has been more generally applied and only recently did the methodology attract the attention of the earth sciences community. Applications have been generally concentrated in geophysics and in particular seismology. As awareness of genetic algorithms grows there surely will be many more and varied applications to earth science problems. In the present work, the
Genetic algorithm for nuclear data evaluation
Energy Technology Data Exchange (ETDEWEB)
Arthur, Jennifer Ann [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
2018-02-02
These are slides on genetic algorithm for nuclear data evaluation. The following is covered: initial population, fitness (outer loop), calculate fitness, selection (first part of inner loop), reproduction (second part of inner loop), solution, and examples.
Nonlinear inversion of potential-field data using a hybrid-encoding genetic algorithm
Chen, C.; Xia, J.; Liu, J.; Feng, G.
2006-01-01
Using a genetic algorithm to solve an inverse problem of complex nonlinear geophysical equations is advantageous because it does not require computer gradients of models or "good" initial models. The multi-point search of a genetic algorithm makes it easier to find the globally optimal solution while avoiding falling into a local extremum. As is the case in other optimization approaches, the search efficiency for a genetic algorithm is vital in finding desired solutions successfully in a multi-dimensional model space. A binary-encoding genetic algorithm is hardly ever used to resolve an optimization problem such as a simple geophysical inversion with only three unknowns. The encoding mechanism, genetic operators, and population size of the genetic algorithm greatly affect search processes in the evolution. It is clear that improved operators and proper population size promote the convergence. Nevertheless, not all genetic operations perform perfectly while searching under either a uniform binary or a decimal encoding system. With the binary encoding mechanism, the crossover scheme may produce more new individuals than with the decimal encoding. On the other hand, the mutation scheme in a decimal encoding system will create new genes larger in scope than those in the binary encoding. This paper discusses approaches of exploiting the search potential of genetic operations in the two encoding systems and presents an approach with a hybrid-encoding mechanism, multi-point crossover, and dynamic population size for geophysical inversion. We present a method that is based on the routine in which the mutation operation is conducted in the decimal code and multi-point crossover operation in the binary code. The mix-encoding algorithm is called the hybrid-encoding genetic algorithm (HEGA). HEGA provides better genes with a higher probability by a mutation operator and improves genetic algorithms in resolving complicated geophysical inverse problems. Another significant
Improved multilayer OLED architecture using evolutionary genetic algorithm
International Nuclear Information System (INIS)
Quirino, W.G.; Teixeira, K.C.; Legnani, C.; Calil, V.L.; Messer, B.; Neto, O.P. Vilela; Pacheco, M.A.C.; Cremona, M.
2009-01-01
Organic light-emitting diodes (OLEDs) constitute a new class of emissive devices, which present high efficiency and low voltage operation, among other advantages over current technology. Multilayer architecture (M-OLED) is generally used to optimize these devices, specially overcoming the suppression of light emission due to the exciton recombination near the metal layers. However, improvement in recombination, transport and charge injection can also be achieved by blending electron and hole transporting layers into the same one. Graded emissive region devices can provide promising results regarding quantum and power efficiency and brightness, as well. The massive number of possible model configurations, however, suggests that a search algorithm would be more suitable for this matter. In this work, multilayer OLEDs were simulated and fabricated using Genetic Algorithms (GAs) as evolutionary strategy to improve their efficiency. Genetic Algorithms are stochastic algorithms based on genetic inheritance and Darwinian strife to survival. In our simulations, it was assumed a 50 nm width graded region, divided into five equally sized layers. The relative concentrations of the materials within each layer were optimized to obtain the lower V/J 0.5 ratio, where V is the applied voltage and J the current density. The best M-OLED architecture obtained by genetic algorithm presented a V/J 0.5 ratio nearly 7% lower than the value reported in the literature. In order to check the experimental validity of the improved results obtained in the simulations, two M-OLEDs with different architectures were fabricated by thermal deposition in high vacuum environment. The results of the comparison between simulation and some experiments are presented and discussed.
Genetic algorithms at UC Davis/LLNL
Energy Technology Data Exchange (ETDEWEB)
Vemuri, V.R. [comp.
1993-12-31
A tutorial introduction to genetic algorithms is given. This brief tutorial should serve the purpose of introducing the subject to the novice. The tutorial is followed by a brief commentary on the term project reports that follow.
Directory of Open Access Journals (Sweden)
Hyo Seon Park
2014-01-01
Full Text Available Since genetic algorithm-based optimization methods are computationally expensive for practical use in the field of structural optimization, a resizing technique-based hybrid genetic algorithm for the drift design of multistory steel frame buildings is proposed to increase the convergence speed of genetic algorithms. To reduce the number of structural analyses required for the convergence, a genetic algorithm is combined with a resizing technique that is an efficient optimal technique to control the drift of buildings without the repetitive structural analysis. The resizing technique-based hybrid genetic algorithm proposed in this paper is applied to the minimum weight design of three steel frame buildings. To evaluate the performance of the algorithm, optimum weights, computational times, and generation numbers from the proposed algorithm are compared with those from a genetic algorithm. Based on the comparisons, it is concluded that the hybrid genetic algorithm shows clear improvements in convergence properties.
International Nuclear Information System (INIS)
Amanifard, N.; Nariman-Zadeh, N.; Borji, M.; Khalkhali, A.; Habibdoust, A.
2008-01-01
Three-dimensional heat transfer characteristics and pressure drop of water flow in a set of rectangular microchannels are numerically investigated using Fluent and compared with those of experimental results. Two metamodels based on the evolved group method of data handling (GMDH) type neural networks are then obtained for modelling of both pressure drop (ΔP) and Nusselt number (Nu) with respect to design variables such as geometrical parameters of microchannels, the amount of heat flux and the Reynolds number. Using such obtained polynomial neural networks, multi-objective genetic algorithms (GAs) (non-dominated sorting genetic algorithm, NSGA-II) with a new diversity preserving mechanism is then used for Pareto based optimization of microchannels considering two conflicting objectives such as (ΔP) and (Nu). It is shown that some interesting and important relationships as useful optimal design principles involved in the performance of microchannels can be discovered by Pareto based multi-objective optimization of the obtained polynomial metamodels representing their heat transfer and flow characteristics. Such important optimal principles would not have been obtained without the use of both GMDH type neural network modelling and the Pareto optimization approach
Genetic algorithms for adaptive real-time control in space systems
Vanderzijp, J.; Choudry, A.
1988-01-01
Genetic Algorithms that are used for learning as one way to control the combinational explosion associated with the generation of new rules are discussed. The Genetic Algorithm approach tends to work best when it can be applied to a domain independent knowledge representation. Applications to real time control in space systems are discussed.
A Comparison of Card-sorting Analysis Methods
DEFF Research Database (Denmark)
Nawaz, Ather
2012-01-01
This study investigates how the choice of analysis method for card sorting studies affects the suggested information structure for websites. In the card sorting technique, a variety of methods are used to analyse the resulting data. The analysis of card sorting data helps user experience (UX......) designers to discover the patterns in how users make classifications and thus to develop an optimal, user-centred website structure. During analysis, the recurrence of patterns of classification between users influences the resulting website structure. However, the algorithm used in the analysis influences...... the recurrent patterns found and thus has consequences for the resulting website design. This paper draws an attention to the choice of card sorting analysis and techniques and shows how it impacts the results. The research focuses on how the same data for card sorting can lead to different website structures...
Applying genetic algorithms for programming manufactoring cell tasks
Directory of Open Access Journals (Sweden)
Efredy Delgado
2005-05-01
Full Text Available This work was aimed for developing computational intelligence for scheduling a manufacturing cell's tasks, based manily on genetic algorithms. The manufacturing cell was modelled as beign a production-line; the makespan was calculated by using heuristics adapted from several libraries for genetic algorithms computed in C++ builder. Several problems dealing with small, medium and large list of jobs and machinery were resolved. The results were compared with other heuristics. The approach developed here would seem to be promising for future research concerning scheduling manufacturing cell tasks involving mixed batches.
International Nuclear Information System (INIS)
Zu Yun-Xiao; Zhou Jie
2012-01-01
Multi-user cognitive radio network resource allocation based on the adaptive niche immune genetic algorithm is proposed, and a fitness function is provided. Simulations are conducted using the adaptive niche immune genetic algorithm, the simulated annealing algorithm, the quantum genetic algorithm and the simple genetic algorithm, respectively. The results show that the adaptive niche immune genetic algorithm performs better than the other three algorithms in terms of the multi-user cognitive radio network resource allocation, and has quick convergence speed and strong global searching capability, which effectively reduces the system power consumption and bit error rate. (geophysics, astronomy, and astrophysics)
Genetic Algorithms for a Parameter Estimation of a Fermentation Process Model: A Comparison
Directory of Open Access Journals (Sweden)
Olympia Roeva
2005-12-01
Full Text Available In this paper the problem of a parameter estimation using genetic algorithms is examined. A case study considering the estimation of 6 parameters of a nonlinear dynamic model of E. coli fermentation is presented as a test problem. The parameter estimation problem is stated as a nonlinear programming problem subject to nonlinear differential-algebraic constraints. This problem is known to be frequently ill-conditioned and multimodal. Thus, traditional (gradient-based local optimization methods fail to arrive satisfied solutions. To overcome their limitations, the use of different genetic algorithms as stochastic global optimization methods is explored. These algorithms are proved to be very suitable for the optimization of highly non-linear problems with many variables. Genetic algorithms can guarantee global optimality and robustness. These facts make them advantageous in use for parameter identification of fermentation models. A comparison between simple, modified and multi-population genetic algorithms is presented. The best result is obtained using the modified genetic algorithm. The considered algorithms converged very closely to the cost value but the modified algorithm is in times faster than other two.
An Improved Hierarchical Genetic Algorithm for Sheet Cutting Scheduling with Process Constraints
Yunqing Rao; Dezhong Qi; Jinling Li
2013-01-01
For the first time, an improved hierarchical genetic algorithm for sheet cutting problem which involves n cutting patterns for m non-identical parallel machines with process constraints has been proposed in the integrated cutting stock model. The objective of the cutting scheduling problem is minimizing the weighted completed time. A mathematical model for this problem is presented, an improved hierarchical genetic algorithm (ant colony—hierarchical genetic algorithm) is developed for better ...
Genetic Algorithm and its Application in Optimal Sensor Layout
Directory of Open Access Journals (Sweden)
Xiang-Yang Chen
2015-05-01
Full Text Available This paper aims at the problem of multi sensor station distribution, based on multi- sensor systems of different types as the research object, in the analysis of various types of sensors with different application background, different indicators of demand, based on the different constraints, for all kinds of multi sensor station is studied, the application of genetic algorithms as a tool for the objective function of the models optimization, then the optimal various types of multi sensor station distribution plan, improve the performance of the system, and achieved good military effect. In the field of application of sensor radar, track measuring instrument, the satellite, passive positioning equipment of various types, specific problem, use care indicators and station arrangement between the mathematical model of geometry, using genetic algorithm to get the optimization results station distribution, to solve a variety of practical problems provides useful help, but also reflects the improved genetic algorithm in electronic weapon system based on multi sensor station distribution on the applicability and effectiveness of the optimization; finally the genetic algorithm for integrated optimization of multi sensor station distribution using the good to the training exercise tasks based on actual in, and have achieved good military effect.
Global Optimization of a Periodic System using a Genetic Algorithm
Stucke, David; Crespi, Vincent
2001-03-01
We use a novel application of a genetic algorithm global optimizatin technique to find the lowest energy structures for periodic systems. We apply this technique to colloidal crystals for several different stoichiometries of binary and trinary colloidal crystals. This application of a genetic algorithm is decribed and results of likely candidate structures are presented.
An Enhanced Genetic Algorithm for the Generalized Traveling Salesman Problem
Directory of Open Access Journals (Sweden)
H. Jafarzadeh
2017-12-01
Full Text Available The generalized traveling salesman problem (GTSP deals with finding the minimum-cost tour in a clustered set of cities. In this problem, the traveler is interested in finding the best path that goes through all clusters. As this problem is NP-hard, implementing a metaheuristic algorithm to solve the large scale problems is inevitable. The performance of these algorithms can be intensively promoted by other heuristic algorithms. In this study, a search method is developed that improves the quality of the solutions and competition time considerably in comparison with Genetic Algorithm. In the proposed algorithm, the genetic algorithms with the Nearest Neighbor Search (NNS are combined and a heuristic mutation operator is applied. According to the experimental results on a set of standard test problems with symmetric distances, the proposed algorithm finds the best solutions in most cases with the least computational time. The proposed algorithm is highly competitive with the published until now algorithms in both solution quality and running time.
Design Optimization of Tilting-Pad Journal Bearing Using a Genetic Algorithm
Directory of Open Access Journals (Sweden)
Hamit Saruhan
2004-01-01
Full Text Available This article focuses on the use of genetic algorithms in developing an efficient optimum design method for tilting pad bearings. The approach optimizes based on minimum film thickness, power loss, maximum film temperature, and a global objective. Results for a five tilting-pad preloaded bearing are presented to provide a comparison with more traditional optimum design methods such as the gradient-based global criterion method, and also to provide insight into the potential of genetic algorithms in the design of rotor bearings. Genetic algorithms are efficient search techniques based on the idea of natural selection and genetics. These robust methods have gained recognition as general problem solving techniques in many applications.
Ouyang, Qi; Lu, Wenxi; Hou, Zeyu; Zhang, Yu; Li, Shuai; Luo, Jiannan
2017-05-01
In this paper, a multi-algorithm genetically adaptive multi-objective (AMALGAM) method is proposed as a multi-objective optimization solver. It was implemented in the multi-objective optimization of a groundwater remediation design at sites contaminated by dense non-aqueous phase liquids. In this study, there were two objectives: minimization of the total remediation cost, and minimization of the remediation time. A non-dominated sorting genetic algorithm II (NSGA-II) was adopted to compare with the proposed method. For efficiency, the time-consuming surfactant-enhanced aquifer remediation simulation model was replaced by a surrogate model constructed by a multi-gene genetic programming (MGGP) technique. Similarly, two other surrogate modeling methods-support vector regression (SVR) and Kriging (KRG)-were employed to make comparisons with MGGP. In addition, the surrogate-modeling uncertainty was incorporated in the optimization model by chance-constrained programming (CCP). The results showed that, for the problem considered in this study, (1) the solutions obtained by AMALGAM incurred less remediation cost and required less time than those of NSGA-II, indicating that AMALGAM outperformed NSGA-II. It was additionally shown that (2) the MGGP surrogate model was more accurate than SVR and KRG; and (3) the remediation cost and time increased with the confidence level, which can enable decision makers to make a suitable choice by considering the given budget, remediation time, and reliability.
Optimal Time-Space Trade-Offs for Non-Comparison-Based Sorting
DEFF Research Database (Denmark)
Pagh, Rasmus; Pagter, Jacob Illeborg
2002-01-01
We study the problem of sorting n integers of w bits on a unit-cost RAM with word size w, and in particular consider the time-space trade-off (product of time and space in bits) for this problem. For comparison-based algorithms, the time-space complexity is known to be Θ(n2). A result of Beame...... shows that the lower bound also holds for non-comparison-based algorithms, but no algorithm has met this for time below the comparison-based Ω(nlgn) lower bound.We show that if sorting within some time bound &Ttilde; is possible, then time T = O(&Ttilde; + nlg* n) can be achieved with high probability...... using space S = O(n2/T + w), which is optimal. Given a deterministic priority queue using amortized time t(n) per operation and space nO(1), we provide a deterministic algorithm sorting in time T = O(n(t(n) + lg* n)) with S = O(n2/T + w). Both results require that w ≤ n1-Ω(1). Using existing priority...
Genetic Algorithm for Traveling Salesman Problem with Modified Cycle Crossover Operator
Directory of Open Access Journals (Sweden)
Abid Hussain
2017-01-01
Full Text Available Genetic algorithms are evolutionary techniques used for optimization purposes according to survival of the fittest idea. These methods do not ensure optimal solutions; however, they give good approximation usually in time. The genetic algorithms are useful for NP-hard problems, especially the traveling salesman problem. The genetic algorithm depends on selection criteria, crossover, and mutation operators. To tackle the traveling salesman problem using genetic algorithms, there are various representations such as binary, path, adjacency, ordinal, and matrix representations. In this article, we propose a new crossover operator for traveling salesman problem to minimize the total distance. This approach has been linked with path representation, which is the most natural way to represent a legal tour. Computational results are also reported with some traditional path representation methods like partially mapped and order crossovers along with new cycle crossover operator for some benchmark TSPLIB instances and found improvements.
Hybridizing Differential Evolution with a Genetic Algorithm for Color Image Segmentation
Directory of Open Access Journals (Sweden)
R. V. V. Krishna
2016-10-01
Full Text Available This paper proposes a hybrid of differential evolution and genetic algorithms to solve the color image segmentation problem. Clustering based color image segmentation algorithms segment an image by clustering the features of color and texture, thereby obtaining accurate prototype cluster centers. In the proposed algorithm, the color features are obtained using the homogeneity model. A new texture feature named Power Law Descriptor (PLD which is a modification of Weber Local Descriptor (WLD is proposed and further used as a texture feature for clustering. Genetic algorithms are competent in handling binary variables, while differential evolution on the other hand is more efficient in handling real parameters. The obtained texture feature is binary in nature and the color feature is a real value, which suits very well the hybrid cluster center optimization problem in image segmentation. Thus in the proposed algorithm, the optimum texture feature centers are evolved using genetic algorithms, whereas the optimum color feature centers are evolved using differential evolution.
A novel progressively swarmed mixed integer genetic algorithm for ...
African Journals Online (AJOL)
MIGA) which inherits the advantages of binary and real coded Genetic Algorithm approach. The proposed algorithm is applied for the conventional generation cost minimization Optimal Power Flow (OPF) problem and for the Security ...
Evolving aerodynamic airfoils for wind turbines through a genetic algorithm
Hernández, J. J.; Gómez, E.; Grageda, J. I.; Couder, C.; Solís, A.; Hanotel, C. L.; Ledesma, JI
2017-01-01
Nowadays, genetic algorithms stand out for airfoil optimisation, due to the virtues of mutation and crossing-over techniques. In this work we propose a genetic algorithm with arithmetic crossover rules. The optimisation criteria are taken to be the maximisation of both aerodynamic efficiency and lift coefficient, while minimising drag coefficient. Such algorithm shows greatly improvements in computational costs, as well as a high performance by obtaining optimised airfoils for Mexico City's specific wind conditions from generic wind turbines designed for higher Reynolds numbers, in few iterations.
Past, present and future of spike sorting techniques.
Rey, Hernan Gonzalo; Pedreira, Carlos; Quian Quiroga, Rodrigo
2015-10-01
Spike sorting is a crucial step to extract information from extracellular recordings. With new recording opportunities provided by the development of new electrodes that allow monitoring hundreds of neurons simultaneously, the scenario for the new generation of algorithms is both exciting and challenging. However, this will require a new approach to the problem and the development of a common reference framework to quickly assess the performance of new algorithms. In this work, we review the basic concepts of spike sorting, including the requirements for different applications, together with the problems faced by presently available algorithms. We conclude by proposing a roadmap stressing the crucial points to be addressed to support the neuroscientific research of the near future. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.
Leibig, Christian; Wachtler, Thomas; Zeck, Günther
2016-09-15
Unsupervised identification of action potentials in multi-channel extracellular recordings, in particular from high-density microelectrode arrays with thousands of sensors, is an unresolved problem. While independent component analysis (ICA) achieves rapid unsupervised sorting, it ignores the convolutive structure of extracellular data, thus limiting the unmixing to a subset of neurons. Here we present a spike sorting algorithm based on convolutive ICA (cICA) to retrieve a larger number of accurately sorted neurons than with instantaneous ICA while accounting for signal overlaps. Spike sorting was applied to datasets with varying signal-to-noise ratios (SNR: 3-12) and 27% spike overlaps, sampled at either 11.5 or 23kHz on 4365 electrodes. We demonstrate how the instantaneity assumption in ICA-based algorithms has to be relaxed in order to improve the spike sorting performance for high-density microelectrode array recordings. Reformulating the convolutive mixture as an instantaneous mixture by modeling several delayed samples jointly is necessary to increase signal-to-noise ratio. Our results emphasize that different cICA algorithms are not equivalent. Spike sorting performance was assessed with ground-truth data generated from experimentally derived templates. The presented spike sorter was able to extract ≈90% of the true spike trains with an error rate below 2%. It was superior to two alternative (c)ICA methods (≈80% accurately sorted neurons) and comparable to a supervised sorting. Our new algorithm represents a fast solution to overcome the current bottleneck in spike sorting of large datasets generated by simultaneous recording with thousands of electrodes. Copyright © 2016 Elsevier B.V. All rights reserved.
Optimization of multicast optical networks with genetic algorithm
Lv, Bo; Mao, Xiangqiao; Zhang, Feng; Qin, Xi; Lu, Dan; Chen, Ming; Chen, Yong; Cao, Jihong; Jian, Shuisheng
2007-11-01
In this letter, aiming to obtain the best multicast performance of optical network in which the video conference information is carried by specified wavelength, we extend the solutions of matrix games with the network coding theory and devise a new method to solve the complex problems of multicast network switching. In addition, an experimental optical network has been testified with best switching strategies by employing the novel numerical solution designed with an effective way of genetic algorithm. The result shows that optimal solutions with genetic algorithm are accordance with the ones with the traditional fictitious play method.
Air data system optimization using a genetic algorithm
Deshpande, Samir M.; Kumar, Renjith R.; Seywald, Hans; Siemers, Paul M., III
1992-01-01
An optimization method for flush-orifice air data system design has been developed using the Genetic Algorithm approach. The optimization of the orifice array minimizes the effect of normally distributed random noise in the pressure readings on the calculation of air data parameters, namely, angle of attack, sideslip angle and freestream dynamic pressure. The optimization method is applied to the design of Pressure Distribution/Air Data System experiment (PD/ADS) proposed for inclusion in the Aeroassist Flight Experiment (AFE). Results obtained by the Genetic Algorithm method are compared to the results obtained by conventional gradient search method.
Genetic algorithm based optimization of advanced solar cell designs modeled in Silvaco AtlasTM
Utsler, James
2006-01-01
A genetic algorithm was used to optimize the power output of multi-junction solar cells. Solar cell operation was modeled using the Silvaco ATLASTM software. The output of the ATLASTM simulation runs served as the input to the genetic algorithm. The genetic algorithm was run as a diffusing computation on a network of eighteen dual processor nodes. Results showed that the genetic algorithm produced better power output optimizations when compared with the results obtained using the hill cli...
Rendezvous maneuvers using Genetic Algorithm
International Nuclear Information System (INIS)
Dos Santos, Denílson Paulo Souza; De Almeida Prado, Antônio F Bertachini; Teodoro, Anderson Rodrigo Barretto
2013-01-01
The present paper has the goal of studying orbital maneuvers of Rendezvous, that is an orbital transfer where a spacecraft has to change its orbit to meet with another spacecraft that is travelling in another orbit. This transfer will be accomplished by using a multi-impulsive control. A genetic algorithm is used to find the transfers that have minimum fuel consumption
The multi-niche crowding genetic algorithm: Analysis and applications
Energy Technology Data Exchange (ETDEWEB)
Cedeno, Walter [Univ. of California, Davis, CA (United States)
1995-09-01
The ability of organisms to evolve and adapt to the environment has provided mother nature with a rich and diverse set of species. Only organisms well adapted to their environment can survive from one generation to the next, transferring on the traits, that made them successful, to their offspring. Competition for resources and the ever changing environment drives some species to extinction and at the same time others evolve to maintain the delicate balance in nature. In this disertation we present the multi-niche crowding genetic algorithm, a computational metaphor to the survival of species in ecological niches in the face of competition. The multi-niche crowding genetic algorithm maintains stable subpopulations of solutions in multiple niches in multimodal landscapes. The algorithm introduces the concept of crowding selection to promote mating among members with qirnilar traits while allowing many members of the population to participate in mating. The algorithm uses worst among most similar replacement policy to promote competition among members with similar traits while allowing competition among members of different niches as well. We present empirical and theoretical results for the success of the multiniche crowding genetic algorithm for multimodal function optimization. The properties of the algorithm using different parameters are examined. We test the performance of the algorithm on problems of DNA Mapping, Aquifer Management, and the File Design Problem. Applications that combine the use of heuristics and special operators to solve problems in the areas of combinatorial optimization, grouping, and multi-objective optimization. We conclude by presenting the advantages and disadvantages of the algorithm and describing avenues for future investigation to answer other questions raised by this study.
Learning sorting algorithms through visualization construction
Cetin, Ibrahim; Andrews-Larson, Christine
2016-01-01
Recent increased interest in computational thinking poses an important question to researchers: What are the best ways to teach fundamental computing concepts to students? Visualization is suggested as one way of supporting student learning. This mixed-method study aimed to (i) examine the effect of instruction in which students constructed visualizations on students' programming achievement and students' attitudes toward computer programming, and (ii) explore how this kind of instruction supports students' learning according to their self-reported experiences in the course. The study was conducted with 58 pre-service teachers who were enrolled in their second programming class. They expect to teach information technology and computing-related courses at the primary and secondary levels. An embedded experimental model was utilized as a research design. Students in the experimental group were given instruction that required students to construct visualizations related to sorting, whereas students in the control group viewed pre-made visualizations. After the instructional intervention, eight students from each group were selected for semi-structured interviews. The results showed that the intervention based on visualization construction resulted in significantly better acquisition of sorting concepts. However, there was no significant difference between the groups with respect to students' attitudes toward computer programming. Qualitative data analysis indicated that students in the experimental group constructed necessary abstractions through their engagement in visualization construction activities. The authors of this study argue that the students' active engagement in the visualization construction activities explains only one side of students' success. The other side can be explained through the instructional approach, constructionism in this case, used to design instruction. The conclusions and implications of this study can be used by researchers and
Machine Learning in Production Systems Design Using Genetic Algorithms
Abu Qudeiri Jaber; Yamamoto Hidehiko Rizauddin Ramli
2008-01-01
To create a solution for a specific problem in machine learning, the solution is constructed from the data or by use a search method. Genetic algorithms are a model of machine learning that can be used to find nearest optimal solution. While the great advantage of genetic algorithms is the fact that they find a solution through evolution, this is also the biggest disadvantage. Evolution is inductive, in nature life does not evolve towards a good solution but it evolves aw...
Energy Technology Data Exchange (ETDEWEB)
Jayalal, M.L., E-mail: jayalal@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Kumar, L. Satish, E-mail: satish@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Jehadeesan, R., E-mail: jeha@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Rajeswari, S., E-mail: raj@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Satya Murty, S.A.V., E-mail: satya@igcar.gov.in [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India); Balasubramaniyan, V.; Chetal, S.C. [Indira Gandhi Centre for Atomic Research, Kalpakkam 603102, Tamil Nadu (India)
2011-10-15
Highlights: > We model design optimization of a vital reactor component using Genetic Algorithm. > Real-parameter Genetic Algorithm is used for steam condenser optimization study. > Comparison analysis done with various Genetic Algorithm related mechanisms. > The results obtained are validated with the reference study results. - Abstract: This work explores the use of Real-parameter Genetic Algorithm and analyses its performance in the steam condenser (or Circulating Water System) optimization study of a 500 MW fast breeder nuclear reactor. Choice of optimum design parameters for condenser for a power plant from among a large number of technically viable combination is a complex task. This is primarily due to the conflicting nature of the economic implications of the different system parameters for maximizing the capitalized profit. In order to find the optimum design parameters a Real-parameter Genetic Algorithm model is developed and applied. The results obtained are validated with the reference study results.
Cultural-Based Genetic Tabu Algorithm for Multiobjective Job Shop Scheduling
Directory of Open Access Journals (Sweden)
Yuzhen Yang
2014-01-01
Full Text Available The job shop scheduling problem, which has been dealt with by various traditional optimization methods over the decades, has proved to be an NP-hard problem and difficult in solving, especially in the multiobjective field. In this paper, we have proposed a novel quadspace cultural genetic tabu algorithm (QSCGTA to solve such problem. This algorithm provides a different structure from the original cultural algorithm in containing double brief spaces and population spaces. These spaces deal with different levels of populations globally and locally by applying genetic and tabu searches separately and exchange information regularly to make the process more effective towards promising areas, along with modified multiobjective domination and transform functions. Moreover, we have presented a bidirectional shifting for the decoding process of job shop scheduling. The computational results we presented significantly prove the effectiveness and efficiency of the cultural-based genetic tabu algorithm for the multiobjective job shop scheduling problem.
Design optimization of brushed permanent magnet D C motor by genetic algorithm
Amini, S
2002-01-01
Because of field winding replacement with permanent magnet in brushed permanent magnet D C (PMDC) motors, field losses are eliminated and the structure of the motor is more simple. Efficiency of these motors is therefore increased and the manufacturing process is simplified. Hence, these motors are commonly used in low power applications and their design and optimization is an important consideration. Genetic algorithms are proposed for design optimization of PMD motors because of their independence to objective function structure and its derivative. In this paper genetic algorithms are evaluated for PMDC motor design optimization. an introduction is first presented about PMDC motors, general design procedure and elements of their optimization. Genetic algorithms are then briefly described. Finally results of optimization by genetic algorithms are compared with the one obtained using a conventional method.
Design optimization of brushed permanent magnet D C motor by genetic algorithm
International Nuclear Information System (INIS)
Amini, S.; Oraee, H.
2002-01-01
Because of field winding replacement with permanent magnet in brushed permanent magnet D C (PMDC) motors, field losses are eliminated and the structure of the motor is more simple. Efficiency of these motors is therefore increased and the manufacturing process is simplified. Hence, these motors are commonly used in low power applications and their design and optimization is an important consideration. Genetic algorithms are proposed for design optimization of PMD motors because of their independence to objective function structure and its derivative. In this paper genetic algorithms are evaluated for PMDC motor design optimization. an introduction is first presented about PMDC motors, general design procedure and elements of their optimization. Genetic algorithms are then briefly described. Finally results of optimization by genetic algorithms are compared with the one obtained using a conventional method
Efficient Dual Domain Decoding of Linear Block Codes Using Genetic Algorithms
Directory of Open Access Journals (Sweden)
Ahmed Azouaoui
2012-01-01
Full Text Available A computationally efficient algorithm for decoding block codes is developed using a genetic algorithm (GA. The proposed algorithm uses the dual code in contrast to the existing genetic decoders in the literature that use the code itself. Hence, this new approach reduces the complexity of decoding the codes of high rates. We simulated our algorithm in various transmission channels. The performance of this algorithm is investigated and compared with competitor decoding algorithms including Maini and Shakeel ones. The results show that the proposed algorithm gives large gains over the Chase-2 decoding algorithm and reach the performance of the OSD-3 for some quadratic residue (QR codes. Further, we define a new crossover operator that exploits the domain specific information and compare it with uniform and two point crossover. The complexity of this algorithm is also discussed and compared to other algorithms.
A polynomial-time algorithm to design push plans for sensorless parts sorting
Berg, de M.; Goaoc, X.; van der Stappen, A.F.
2005-01-01
We consider the efficient computation of sequences of push actions that simultaneously orient two different polygons. Our motivation for studying this problem comes from the observation that appropriately oriented parts admit simple sensorless sorting. We study the sorting of two polygonal parts by
Acoustic Impedance Inversion of Seismic Data Using Genetic Algorithm
Eladj, Said; Djarfour, Noureddine; Ferahtia, Djalal; Ouadfeul, Sid-Ali
2013-04-01
The inversion of seismic data can be used to constrain estimates of the Earth's acoustic impedance structure. This kind of problem is usually known to be non-linear, high-dimensional, with a complex search space which may be riddled with many local minima, and results in irregular objective functions. We investigate here the performance and the application of a genetic algorithm, in the inversion of seismic data. The proposed algorithm has the advantage of being easily implemented without getting stuck in local minima. The effects of population size, Elitism strategy, uniform cross-over and lower mutation are examined. The optimum solution parameters and performance were decided as a function of the testing error convergence with respect to the generation number. To calculate the fitness function, we used L2 norm of the sample-to-sample difference between the reference and the inverted trace. The cross-over probability is of 0.9-0.95 and mutation has been tested at 0.01 probability. The application of such a genetic algorithm to synthetic data shows that the inverted acoustic impedance section was efficient. Keywords: Seismic, Inversion, acoustic impedance, genetic algorithm, fitness functions, cross-over, mutation.
Genetic engineering versus natural evolution: Genetic algorithms with deterministic operators
Jozwiak, L.; Postula, A.
2002-01-01
Genetic algorithms (GA) have several important features that predestine them to solve design problems. Their main disadvantage however is the excessively long run-time that is needed to deliver satisfactory results for large instances of complex design problems. The main aims of this paper are (1)
Directory of Open Access Journals (Sweden)
Jiashen Teh
2018-04-01
Full Text Available The integration of renewable energy sources, especially wind energy, has been on the rise throughout power systems worldwide. Due to this relatively new introduction, the integration of wind energy is often not optimized. Moreover, owing to the technical constraints and transmission congestions of the power network, most of the wind energy has to be curtailed. Due to various factors that influence the connectivity of wind energy, this paper proposes a well-organized posterior multi-objective (MO optimization algorithm for maximizing the connections of wind energy. In this regard, the dynamic thermal rating (DTR system and the static VAR compensator (SVC have been identified as effective tools for improving the loadability of the network. The propose MO algorithm in this paper aims to minimize: (1 wind energy curtailment, (2 operation cost of the network considering all investments and operations, also known as the total social cost, and (3 SVC operation cost. The proposed MO problem was solved using the non-dominated sorting genetic algorithm (NSGA II and it was tested on the modified IEEE reliability test system (IEEE-RTS. The results demonstrate the applicability of the proposed algorithm in aiding power system enhancement planning for integrating wind energy.
Keshtkaran, Mohammad Reza; Yang, Zhi
2017-06-01
Spike sorting is a fundamental preprocessing step for many neuroscience studies which rely on the analysis of spike trains. Most of the feature extraction and dimensionality reduction techniques that have been used for spike sorting give a projection subspace which is not necessarily the most discriminative one. Therefore, the clusters which appear inherently separable in some discriminative subspace may overlap if projected using conventional feature extraction approaches leading to a poor sorting accuracy especially when the noise level is high. In this paper, we propose a noise-robust and unsupervised spike sorting algorithm based on learning discriminative spike features for clustering. The proposed algorithm uses discriminative subspace learning to extract low dimensional and most discriminative features from the spike waveforms and perform clustering with automatic detection of the number of the clusters. The core part of the algorithm involves iterative subspace selection using linear discriminant analysis and clustering using Gaussian mixture model with outlier detection. A statistical test in the discriminative subspace is proposed to automatically detect the number of the clusters. Comparative results on publicly available simulated and real in vivo datasets demonstrate that our algorithm achieves substantially improved cluster distinction leading to higher sorting accuracy and more reliable detection of clusters which are highly overlapping and not detectable using conventional feature extraction techniques such as principal component analysis or wavelets. By providing more accurate information about the activity of more number of individual neurons with high robustness to neural noise and outliers, the proposed unsupervised spike sorting algorithm facilitates more detailed and accurate analysis of single- and multi-unit activities in neuroscience and brain machine interface studies.
Keshtkaran, Mohammad Reza; Yang, Zhi
2017-06-01
Objective. Spike sorting is a fundamental preprocessing step for many neuroscience studies which rely on the analysis of spike trains. Most of the feature extraction and dimensionality reduction techniques that have been used for spike sorting give a projection subspace which is not necessarily the most discriminative one. Therefore, the clusters which appear inherently separable in some discriminative subspace may overlap if projected using conventional feature extraction approaches leading to a poor sorting accuracy especially when the noise level is high. In this paper, we propose a noise-robust and unsupervised spike sorting algorithm based on learning discriminative spike features for clustering. Approach. The proposed algorithm uses discriminative subspace learning to extract low dimensional and most discriminative features from the spike waveforms and perform clustering with automatic detection of the number of the clusters. The core part of the algorithm involves iterative subspace selection using linear discriminant analysis and clustering using Gaussian mixture model with outlier detection. A statistical test in the discriminative subspace is proposed to automatically detect the number of the clusters. Main results. Comparative results on publicly available simulated and real in vivo datasets demonstrate that our algorithm achieves substantially improved cluster distinction leading to higher sorting accuracy and more reliable detection of clusters which are highly overlapping and not detectable using conventional feature extraction techniques such as principal component analysis or wavelets. Significance. By providing more accurate information about the activity of more number of individual neurons with high robustness to neural noise and outliers, the proposed unsupervised spike sorting algorithm facilitates more detailed and accurate analysis of single- and multi-unit activities in neuroscience and brain machine interface studies.
Energy Technology Data Exchange (ETDEWEB)
Loring, Burlen; Karimabadi, Homa; Rortershteyn, Vadim
2014-07-01
The surface line integral convolution(LIC) visualization technique produces dense visualization of vector fields on arbitrary surfaces. We present a screen space surface LIC algorithm for use in distributed memory data parallel sort last rendering infrastructures. The motivations for our work are to support analysis of datasets that are too large to fit in the main memory of a single computer and compatibility with prevalent parallel scientific visualization tools such as ParaView and VisIt. By working in screen space using OpenGL we can leverage the computational power of GPUs when they are available and run without them when they are not. We address efficiency and performance issues that arise from the transformation of data from physical to screen space by selecting an alternate screen space domain decomposition. We analyze the algorithm's scaling behavior with and without GPUs on two high performance computing systems using data from turbulent plasma simulations.
Sorting, Searching, and Simulation in the MapReduce Framework
DEFF Research Database (Denmark)
Goodrich, Michael T.; Sitchinava, Nodari; Zhang, Qin
2011-01-01
usefulness of our approach by designing and analyzing efficient MapReduce algorithms for fundamental sorting, searching, and simulation problems. This study is motivated by a goal of ultimately putting the MapReduce framework on an equal theoretical footing with the well-known PRAM and BSP parallel...... in parallel computational geometry for the MapReduce framework, which result in efficient MapReduce algorithms for sorting, 2- and 3-dimensional convex hulls, and fixed-dimensional linear programming. For the case when mappers and reducers have a memory/message-I/O size of M = (N), for a small constant > 0...
Algorithmic Trading with Developmental and Linear Genetic Programming
Wilson, Garnett; Banzhaf, Wolfgang
A developmental co-evolutionary genetic programming approach (PAM DGP) and a standard linear genetic programming (LGP) stock trading systemare applied to a number of stocks across market sectors. Both GP techniques were found to be robust to market fluctuations and reactive to opportunities associated with stock price rise and fall, with PAMDGP generating notably greater profit in some stock trend scenarios. Both algorithms were very accurate at buying to achieve profit and selling to protect assets, while exhibiting bothmoderate trading activity and the ability to maximize or minimize investment as appropriate. The content of the trading rules produced by both algorithms are also examined in relation to stock price trend scenarios.
Directory of Open Access Journals (Sweden)
Wensheng Guo
Full Text Available In biological systems, the dynamic analysis method has gained increasing attention in the past decade. The Boolean network is the most common model of a genetic regulatory network. The interactions of activation and inhibition in the genetic regulatory network are modeled as a set of functions of the Boolean network, while the state transitions in the Boolean network reflect the dynamic property of a genetic regulatory network. A difficult problem for state transition analysis is the finding of attractors. In this paper, we modeled the genetic regulatory network as a Boolean network and proposed a solving algorithm to tackle the attractor finding problem. In the proposed algorithm, we partitioned the Boolean network into several blocks consisting of the strongly connected components according to their gradients, and defined the connection between blocks as decision node. Based on the solutions calculated on the decision nodes and using a satisfiability solving algorithm, we identified the attractors in the state transition graph of each block. The proposed algorithm is benchmarked on a variety of genetic regulatory networks. Compared with existing algorithms, it achieved similar performance on small test cases, and outperformed it on larger and more complex ones, which happens to be the trend of the modern genetic regulatory network. Furthermore, while the existing satisfiability-based algorithms cannot be parallelized due to their inherent algorithm design, the proposed algorithm exhibits a good scalability on parallel computing architectures.
International Nuclear Information System (INIS)
Jayalal, M.L.; Kumar, L. Satish; Jehadeesan, R.; Rajeswari, S.; Satya Murty, S.A.V.; Balasubramaniyan, V.; Chetal, S.C.
2011-01-01
Highlights: → We model design optimization of a vital reactor component using Genetic Algorithm. → Real-parameter Genetic Algorithm is used for steam condenser optimization study. → Comparison analysis done with various Genetic Algorithm related mechanisms. → The results obtained are validated with the reference study results. - Abstract: This work explores the use of Real-parameter Genetic Algorithm and analyses its performance in the steam condenser (or Circulating Water System) optimization study of a 500 MW fast breeder nuclear reactor. Choice of optimum design parameters for condenser for a power plant from among a large number of technically viable combination is a complex task. This is primarily due to the conflicting nature of the economic implications of the different system parameters for maximizing the capitalized profit. In order to find the optimum design parameters a Real-parameter Genetic Algorithm model is developed and applied. The results obtained are validated with the reference study results.
Genetic local search algorithm for optimization design of diffractive optical elements.
Zhou, G; Chen, Y; Wang, Z; Song, H
1999-07-10
We propose a genetic local search algorithm (GLSA) for the optimization design of diffractive optical elements (DOE's). This hybrid algorithm incorporates advantages of both genetic algorithm (GA) and local search techniques. It appears better able to locate the global minimum compared with a canonical GA. Sample cases investigated here include the optimization design of binary-phase Dammann gratings, continuous surface-relief grating array generators, and a uniform top-hat focal plane intensity profile generator. Two GLSA's whose incorporated local search techniques are the hill-climbing method and the simulated annealing algorithm are investigated. Numerical experimental results demonstrate that the proposed algorithm is highly efficient and robust. DOE's that have high diffraction efficiency and excellent uniformity can be achieved by use of the algorithm we propose.
Genetic algorithms - A new technique for solving the neutron spectrum unfolding problem
International Nuclear Information System (INIS)
Freeman, David W.; Edwards, D. Ray; Bolon, Albert E.
1999-01-01
A new technique utilizing genetic algorithms has been applied to the Bonner sphere neutron spectrum unfolding problem. Genetic algorithms are part of a relatively new field of 'evolutionary' solution techniques that mimic living systems with computer-simulated 'chromosome' solutions. Solutions mate and mutate to create better solutions. Several benchmark problems, considered representative of radiation protection environments, have been evaluated using the newly developed UMRGA code which implements the genetic algorithm unfolding technique. The results are compared with results from other well-established unfolding codes. The genetic algorithm technique works remarkably well and produces solutions with relatively high spectral qualities. UMRGA appears to be a superior technique in the absence of a priori data - it does not rely on 'lucky' guesses of input spectra. Calculated personnel doses associated with the unfolded spectra match benchmark values within a few percent
Simulating Evolution of Drosophila melanogaster Ebony Mutants Using a Genetic Algorithm
DEFF Research Database (Denmark)
Helles, Glennie
2009-01-01
Genetic algorithms are generally quite easy to understand and work with, and they are a popular choice in many cases. One area in which genetic algorithms are widely and successfully used is artificial life where they are used to simulate evolution of artificial creatures. However, despite...... their suggestive name, simplicity and popularity in artificial life, they do not seem to have gained a footing within the field of population genetics to simulate evolution of real organisms --- possibly because genetic algorithms are based on a rather crude simplification of the evolutionary mechanisms known...
A case study of a multiobjective recombinative genetic algorithm with coevolutionary sharing
Neef, R.M.; Thierens, D.; Arciszewski, H.F.R.
1999-01-01
We present a multiobjective genetic algorithm that incorporates various genetic algorithm techniques that have been proven to be efficient and robust in their problem domain. More specifically, we integrate rank based selection, adaptive niching through coevolutionary sharing, elitist recombination,
Sorting, Searching, and Simulation in the MapReduce Framework
DEFF Research Database (Denmark)
Goodrich, Michael T.; Sitchinava, Nodar; Zhang, Qin
2011-01-01
We study the MapReduce framework from an algorithmic standpoint, providing a generalization of the previous algorithmic models for MapReduce. We present optimal solutions for the fundamental problems of all-prefix-sums, sorting and multi-searching. Additionally, we design optimal simulations...
Near-Optimal Resource Allocation in Cooperative Cellular Networks Using Genetic Algorithms
Luo, Zihan; Armour, Simon; McGeehan, Joe
2015-01-01
This paper shows how a genetic algorithm can be used as a method of obtaining the near-optimal solution of the resource block scheduling problem in a cooperative cellular network. An exhaustive search is initially implementedto guarantee that the optimal result, in terms of maximizing the bandwidth efficiency of the overall network, is found, and then the genetic algorithm with the properly selected termination conditions is used in the same network. The simulation results show that the genet...
Earthquake—explosion discrimination using genetic algorithm-based boosting approach
Orlic, Niksa; Loncaric, Sven
2010-02-01
An important and challenging problem in seismic data processing is to discriminate between natural seismic events such as earthquakes and artificial seismic events such as explosions. Many automatic techniques for seismogram classification have been proposed in the literature. Most of these methods have a similar approach to seismogram classification: a predefined set of features based on ad-hoc feature selection criteria is extracted from the seismogram waveform or spectral data and these features are used for signal classification. In this paper we propose a novel approach for seismogram classification. A specially formulated genetic algorithm has been employed to automatically search for a near-optimal seismogram feature set, instead of using ad-hoc feature selection criteria. A boosting method is added to the genetic algorithm when searching for multiple features in order to improve classification performance. A learning set of seismogram data is used by the genetic algorithm to discover a near-optimal feature set. The feature set identified by the genetic algorithm is then used for seismogram classification. The described method is developed to classify seismograms in two groups, whereas a brief overview of method extension for multiple group classification is given. For method verification, a learning set consisting of 40 local earthquake seismograms and 40 explosion seismograms was used. The method was validated on seismogram set consisting of 60 local earthquake seismograms and 60 explosion seismograms, with correct classification of 85%.
International Nuclear Information System (INIS)
Kastanya, Doddy
2012-01-01
Highlights: ► ADORE is an algorithm for CANDU ROP Detector Layout Optimization. ► ADORE-GA is a Genetic Algorithm variant of the ADORE algorithm. ► Robustness test of ADORE-GA algorithm is presented in this paper. - Abstract: The regional overpower protection (ROP) systems protect CANDU® reactors against overpower in the fuel that could reduce the safety margin-to-dryout. The overpower could originate from a localized power peaking within the core or a general increase in the global core power level. The design of the detector layout for ROP systems is a challenging discrete optimization problem. In recent years, two algorithms have been developed to find a quasi optimal solution to this detector layout optimization problem. Both of these algorithms utilize the simulated annealing (SA) algorithm as their optimization engine. In the present paper, an alternative optimization algorithm, namely the genetic algorithm (GA), has been implemented as the optimization engine. The implementation is done within the ADORE algorithm. Results from evaluating the effects of using various mutation rates and crossover parameters are presented in this paper. It has been demonstrated that the algorithm is sufficiently robust in producing similar quality solutions.
Directory of Open Access Journals (Sweden)
Johan Soewanda
2007-01-01
Full Text Available This paper discusses the application of Robust Hybrid Genetic Algorithm to solve a flow-shop scheduling problem. The proposed algorithm attempted to reach minimum makespan. PT. FSCM Manufacturing Indonesia Plant 4's case was used as a test case to evaluate the performance of the proposed algorithm. The proposed algorithm was compared to Ant Colony, Genetic-Tabu, Hybrid Genetic Algorithm, and the company's algorithm. We found that Robust Hybrid Genetic produces statistically better result than the company's, but the same as Ant Colony, Genetic-Tabu, and Hybrid Genetic. In addition, Robust Hybrid Genetic Algorithm required less computational time than Hybrid Genetic Algorithm
Optimization of Antennas using a Hybrid Genetic-Algorithm Space-Mapping Algorithm
DEFF Research Database (Denmark)
Pantoja, M.F.; Bretones, A.R.; Meincke, Peter
2006-01-01
A hybrid global-local optimization technique for the design of antennas is presented. It consists of the subsequent application of a Genetic Algorithm (GA) that employs coarse models in the simulations and a space mapping (SM) that refines the solution found in the previous stage. The technique...
Global structural optimizations of surface systems with a genetic algorithm
International Nuclear Information System (INIS)
Chuang, Feng-Chuan
2005-01-01
Global structural optimizations with a genetic algorithm were performed for atomic cluster and surface systems including aluminum atomic clusters, Si magic clusters on the Si(111) 7 x 7 surface, silicon high-index surfaces, and Ag-induced Si(111) reconstructions. First, the global structural optimizations of neutral aluminum clusters Al n (n up to 23) were performed using a genetic algorithm coupled with a tight-binding potential. Second, a genetic algorithm in combination with tight-binding and first-principles calculations were performed to study the structures of magic clusters on the Si(111) 7 x 7 surface. Extensive calculations show that the magic cluster observed in scanning tunneling microscopy (STM) experiments consist of eight Si atoms. Simulated STM images of the Si magic cluster exhibit a ring-like feature similar to STM experiments. Third, a genetic algorithm coupled with a highly optimized empirical potential were used to determine the lowest energy structure of high-index semiconductor surfaces. The lowest energy structures of Si(105) and Si(114) were determined successfully. The results of Si(105) and Si(114) are reported within the framework of highly optimized empirical potential and first-principles calculations. Finally, a genetic algorithm coupled with Si and Ag tight-binding potentials were used to search for Ag-induced Si(111) reconstructions at various Ag and Si coverages. The optimized structural models of √3 x √3, 3 x 1, and 5 x 2 phases were reported using first-principles calculations. A novel model is found to have lower surface energy than the proposed double-honeycomb chained (DHC) model both for Au/Si(111) 5 x 2 and Ag/Si(111) 5 x 2 systems
Genetic algorithm solution for partial digest problem.
Ahrabian, Hayedeh; Ganjtabesh, Mohammad; Nowzari-Dalini, Abbas; Razaghi-Moghadam-Kashani, Zahra
2013-01-01
One of the fundamental problems in computational biology is the construction of physical maps of chromosomes from the hybridisation experiments between unique probes and clones of chromosome fragments. Before introducing the shotgun sequencing method, Partial Digest Problem (PDP) was an intractable problem used to construct the physical maps of DNA sequence in molecular biology. In this paper, we develop a novel Genetic Algorithm (GA) for solving the PDP. This algorithm is implemented and compared with well-known existing algorithms on different types of random and real instances data, and the obtained results show the efficiency of our algorithm. Also, our GA is adapted to handle the erroneous data and their efficiency is presented for the large instances of this problem.
A Quality Sorting of Fruit Using a New Automatic Image Processing Method
Amenomori, Michihiro; Yokomizu, Nobuyuki
This paper presents an innovative approach for quality sorting of objects such as apples sorting in an agricultural factory, using an image processing algorithm. The objective of our approach are; firstly to sort the objects by their colors precisely; secondly to detect any irregularity of the colors surrounding the apples efficiently. An experiment has been conducted and the results have been obtained and compared with that has been preformed by human sorting process and by color sensor sorting devices. The results demonstrate that our approach is capable to sort the objects rapidly and the percentage of classification valid rate was 100 %.
Hybrid Microgrid Configuration Optimization with Evolutionary Algorithms
Lopez, Nicolas
This dissertation explores the Renewable Energy Integration Problem, and proposes a Genetic Algorithm embedded with a Monte Carlo simulation to solve large instances of the problem that are impractical to solve via full enumeration. The Renewable Energy Integration Problem is defined as finding the optimum set of components to supply the electric demand to a hybrid microgrid. The components considered are solar panels, wind turbines, diesel generators, electric batteries, connections to the power grid and converters, which can be inverters and/or rectifiers. The methodology developed is explained as well as the combinatorial formulation. In addition, 2 case studies of a single objective optimization version of the problem are presented, in order to minimize cost and to minimize global warming potential (GWP) followed by a multi-objective implementation of the offered methodology, by utilizing a non-sorting Genetic Algorithm embedded with a monte Carlo Simulation. The method is validated by solving a small instance of the problem with known solution via a full enumeration algorithm developed by NREL in their software HOMER. The dissertation concludes that the evolutionary algorithms embedded with Monte Carlo simulation namely modified Genetic Algorithms are an efficient form of solving the problem, by finding approximate solutions in the case of single objective optimization, and by approximating the true Pareto front in the case of multiple objective optimization of the Renewable Energy Integration Problem.
[Algorithm of toxigenic genetically altered Vibrio cholerae El Tor biovar strain identification].
Smirnova, N I; Agafonov, D A; Zadnova, S P; Cherkasov, A V; Kutyrev, V V
2014-01-01
Development of an algorithm of genetically altered Vibrio cholerae biovar El Tor strai identification that ensures determination of serogroup, serovar and biovar of the studied isolate based on pheno- and genotypic properties, detection of genetically altered cholera El Tor causative agents, their differentiation by epidemic potential as well as evaluation of variability of key pathogenicity genes. Complex analysis of 28 natural V. cholerae strains was carried out by using traditional microbiological methods, PCR and fragmentary sequencing. An algorithm of toxigenic genetically altered V. cholerae biovar El Tor strain identification was developed that includes 4 stages: determination of serogroup, serovar and biovar based on phenotypic properties, confirmation of serogroup and biovar based on molecular-genetic properties determination of strains as genetically altered, differentiation of genetically altered strains by their epidemic potential and detection of ctxB and tcpA key pathogenicity gene polymorphism. The algorithm is based on the use of traditional microbiological methods, PCR and sequencing of gene fragments. The use of the developed algorithm will increase the effectiveness of detection of genetically altered variants of the cholera El Tor causative agent, their differentiation by epidemic potential and will ensure establishment of polymorphism of genes that code key pathogenicity factors for determination of origins of the strains and possible routes of introduction of the infection.
Ouyang, Qi; Lu, Wenxi; Hou, Zeyu; Zhang, Yu; Li, Shuai; Luo, Jiannan
2017-05-01
In this paper, a multi-algorithm genetically adaptive multi-objective (AMALGAM) method is proposed as a multi-objective optimization solver. It was implemented in the multi-objective optimization of a groundwater remediation design at sites contaminated by dense non-aqueous phase liquids. In this study, there were two objectives: minimization of the total remediation cost, and minimization of the remediation time. A non-dominated sorting genetic algorithm II (NSGA-II) was adopted to compare with the proposed method. For efficiency, the time-consuming surfactant-enhanced aquifer remediation simulation model was replaced by a surrogate model constructed by a multi-gene genetic programming (MGGP) technique. Similarly, two other surrogate modeling methods-support vector regression (SVR) and Kriging (KRG)-were employed to make comparisons with MGGP. In addition, the surrogate-modeling uncertainty was incorporated in the optimization model by chance-constrained programming (CCP). The results showed that, for the problem considered in this study, (1) the solutions obtained by AMALGAM incurred less remediation cost and required less time than those of NSGA-II, indicating that AMALGAM outperformed NSGA-II. It was additionally shown that (2) the MGGP surrogate model was more accurate than SVR and KRG; and (3) the remediation cost and time increased with the confidence level, which can enable decision makers to make a suitable choice by considering the given budget, remediation time, and reliability. Copyright © 2017 Elsevier B.V. All rights reserved.
International Nuclear Information System (INIS)
Tian, Hao; Yuan, Xiaohui; Ji, Bin; Chen, Zhihuan
2014-01-01
Highlights: • An improved non-dominated sorting gravitational search algorithm (NSGSA-CM) is proposed. • NSGSA-CM is used to solve the problem of short-term multi-objective hydrothermal scheduling. • We enhance the search capability of NSGSA-CM by chaotic mutation. • New strategies are devised to handle various constraints in NSGSA-CM. • We obtain better compromise solutions with less fuel cost and emissions. - Abstract: This paper proposes a non-dominated sorting gravitational search algorithm with chaotic mutation (NSGSA-CM) to solve short-term economic/environmental hydrothermal scheduling (SEEHTS) problem. The SEEHTS problem is formulated as a multi-objective optimization problem with many equality and inequality constraints. By introducing the concept of non-dominated sorting and crowding distance, NSGSA-CM can optimize two objectives of fuel cost and pollutant emission simultaneously and obtain a set of Pareto optimal solutions in one trial. In order to improve the performance of NSGSA-CM, the paper introduces particle memory character and population social information in velocity update process. And a chaotic mutation is adopted to prevent the premature convergence. Furthermore, NSGSA-CM utilizes an elitism strategy which selects better solutions in parent and offspring populations based on their non-domination rank and crowding distance to update new generations. When dealing with the constraints of the SEEHTS, new strategies without penalty factors are proposed. In order to handle the water dynamic balance and system load balance constraints, this paper uses a combined strategy which adjusts the violation averagely to each decision variable at first and adjusts the rest violation randomly later. Meanwhile, a new symmetrical adjustment strategy by modifying the discharges at current and later interval without breaking water dynamic balance is adopted to handle reservoir storage constraints. To test the performance of the proposed NSGSA
Hao, Yufang; Xie, Shaodong
2018-03-01
Air quality monitoring networks play a significant role in identifying the spatiotemporal patterns of air pollution, and they need to be deployed efficiently, with a minimum number of sites. The revision and optimal adjustment of existing monitoring networks is crucial for cities that have undergone rapid urban expansion and experience temporal variations in pollution patterns. The approach based on the Weather Research and Forecasting-California PUFF (WRF-CALPUFF) model and genetic algorithm (GA) was developed to design an optimal monitoring network. The maximization of coverage with minimum overlap and the ability to detect violations of standards were developed as the design objectives for redistributed networks. The non-dominated sorting genetic algorithm was applied to optimize the network size and site locations simultaneously for Shijiazhuang city, one of the most polluted cities in China. The assessment on the current network identified the insufficient spatial coverage of SO2 and NO2 monitoring for the expanding city. The optimization results showed that significant improvements were achieved in multiple objectives by redistributing the original network. Efficient coverage of the resulting designs improved to 60.99% and 76.06% of the urban area for SO2 and NO2, respectively. The redistributing design for multi-pollutant including 8 sites was also proposed, with the spatial representation covered 52.30% of the urban area and the overlapped areas decreased by 85.87% compared with the original network. The abilities to detect violations of standards were not improved as much as the other two objectives due to the conflicting nature between the multiple objectives. Additionally, the results demonstrated that the algorithm was slightly sensitive to the parameter settings, with the number of generations presented the most significant effect. Overall, our study presents an effective and feasible procedure for air quality network optimization at a city scale.
A genetic algorithm for the optimization of fiber angles in composite laminates
International Nuclear Information System (INIS)
Hwang, Shun Fa; Hsu, Ya Chu; Chen, Yuder
2014-01-01
A genetic algorithm for the optimization of composite laminates is proposed in this work. The well-known roulette selection criterion, one-point crossover operator, and uniform mutation operator are used in this genetic algorithm to create the next population. To improve the hill-climbing capability of the algorithm, adaptive mechanisms designed to adjust the probabilities of the crossover and mutation operators are included, and the elite strategy is enforced to ensure the quality of the optimum solution. The proposed algorithm includes a new operator called the elite comparison, which compares and uses the differences in the design variables of the two best solutions to find possible combinations. This genetic algorithm is tested in four optimization problems of composite laminates. Specifically, the effect of the elite comparison operator is evaluated. Results indicate that the elite comparison operator significantly accelerates the convergence of the algorithm, which thus becomes a good candidate for the optimization of composite laminates.
Predicting mining activity with parallel genetic algorithms
Talaie, S.; Leigh, R.; Louis, S.J.; Raines, G.L.; Beyer, H.G.; O'Reilly, U.M.; Banzhaf, Arnold D.; Blum, W.; Bonabeau, C.; Cantu-Paz, E.W.; ,; ,
2005-01-01
We explore several different techniques in our quest to improve the overall model performance of a genetic algorithm calibrated probabilistic cellular automata. We use the Kappa statistic to measure correlation between ground truth data and data predicted by the model. Within the genetic algorithm, we introduce a new evaluation function sensitive to spatial correctness and we explore the idea of evolving different rule parameters for different subregions of the land. We reduce the time required to run a simulation from 6 hours to 10 minutes by parallelizing the code and employing a 10-node cluster. Our empirical results suggest that using the spatially sensitive evaluation function does indeed improve the performance of the model and our preliminary results also show that evolving different rule parameters for different regions tends to improve overall model performance. Copyright 2005 ACM.
Fuzzy Information Retrieval Using Genetic Algorithms and Relevance Feedback.
Petry, Frederick E.; And Others
1993-01-01
Describes an approach that combines concepts from information retrieval, fuzzy set theory, and genetic programing to improve weighted Boolean query formulation via relevance feedback. Highlights include background on information retrieval systems; genetic algorithms; subproblem formulation; and preliminary results based on a testbed. (Contains 12…
Design of PID Controller Simulator based on Genetic Algorithm
Directory of Open Access Journals (Sweden)
Fahri VATANSEVER
2013-08-01
Full Text Available PID (Proportional Integral and Derivative controllers take an important place in the field of system controlling. Various methods such as Ziegler-Nichols, Cohen-Coon, Chien Hrones Reswick (CHR and Wang-Juang-Chan are available for the design of such controllers benefiting from the system time and frequency domain data. These controllers are in compliance with system properties under certain criteria suitable to the system. Genetic algorithms have become widely used in control system applications in parallel to the advances in the field of computer and artificial intelligence. In this study, PID controller designs have been carried out by means of classical methods and genetic algorithms and comparative results have been analyzed. For this purpose, a graphical user interface program which can be used for educational purpose has been developed. For the definite (entered transfer functions, the suitable P, PI and PID controller coefficients have calculated by both classical methods and genetic algorithms and many parameters and responses of the systems have been compared and presented numerically and graphically
Optimization of Neuro-Fuzzy System Using Genetic Algorithm for Chromosome Classification
Directory of Open Access Journals (Sweden)
M. Sarosa
2013-09-01
Full Text Available Neuro-fuzzy system has been shown to provide a good performance on chromosome classification but does not offer a simple method to obtain the accurate parameter values required to yield the best recognition rate. This paper presents a neuro-fuzzy system where its parameters can be automatically adjusted using genetic algorithms. The approach combines the advantages of fuzzy logic theory, neural networks, and genetic algorithms. The structure consists of a four layer feed-forward neural network that uses a GBell membership function as the output function. The proposed methodology has been applied and tested on banded chromosome classification from the Copenhagen Chromosome Database. Simulation result showed that the proposed neuro-fuzzy system optimized by genetic algorithms offers advantages in setting the parameter values, improves the recognition rate significantly and decreases the training/testing time which makes genetic neuro-fuzzy system suitable for chromosome classification.
Fanuel, Ibrahim Mwita; Mushi, Allen; Kajunguri, Damian
2018-03-01
This paper analyzes more than 40 papers with a restricted area of application of Multi-Objective Genetic Algorithm, Non-Dominated Sorting Genetic Algorithm-II and Multi-Objective Differential Evolution (MODE) to solve the multi-objective problem in agricultural water management. The paper focused on different application aspects which include water allocation, irrigation planning, crop pattern and allocation of available land. The performance and results of these techniques are discussed. The review finds that there is a potential to use MODE to analyzed the multi-objective problem, the application is more significance due to its advantage of being simple and powerful technique than any Evolutionary Algorithm. The paper concludes with the hopeful new trend of research that demand effective use of MODE; inclusion of benefits derived from farm byproducts and production costs into the model.
A Parallel Genetic Algorithm for Automated Electronic Circuit Design
Long, Jason D.; Colombano, Silvano P.; Haith, Gary L.; Stassinopoulos, Dimitris
2000-01-01
Parallelized versions of genetic algorithms (GAs) are popular primarily for three reasons: the GA is an inherently parallel algorithm, typical GA applications are very compute intensive, and powerful computing platforms, especially Beowulf-style computing clusters, are becoming more affordable and easier to implement. In addition, the low communication bandwidth required allows the use of inexpensive networking hardware such as standard office ethernet. In this paper we describe a parallel GA and its use in automated high-level circuit design. Genetic algorithms are a type of trial-and-error search technique that are guided by principles of Darwinian evolution. Just as the genetic material of two living organisms can intermix to produce offspring that are better adapted to their environment, GAs expose genetic material, frequently strings of 1s and Os, to the forces of artificial evolution: selection, mutation, recombination, etc. GAs start with a pool of randomly-generated candidate solutions which are then tested and scored with respect to their utility. Solutions are then bred by probabilistically selecting high quality parents and recombining their genetic representations to produce offspring solutions. Offspring are typically subjected to a small amount of random mutation. After a pool of offspring is produced, this process iterates until a satisfactory solution is found or an iteration limit is reached. Genetic algorithms have been applied to a wide variety of problems in many fields, including chemistry, biology, and many engineering disciplines. There are many styles of parallelism used in implementing parallel GAs. One such method is called the master-slave or processor farm approach. In this technique, slave nodes are used solely to compute fitness evaluations (the most time consuming part). The master processor collects fitness scores from the nodes and performs the genetic operators (selection, reproduction, variation, etc.). Because of dependency
Optimization of MIS/IL solar cells parameters using genetic algorithm
Energy Technology Data Exchange (ETDEWEB)
Ahmed, K.A.; Mohamed, E.A.; Alaa, S.H. [Faculty of Engineering, Alexandria Univ. (Egypt); Motaz, M.S. [Institute of Graduate Studies and Research, Alexandria Univ. (Egypt)
2004-07-01
This paper presents a genetic algorithm optimization for MIS/IL solar cell parameters including doping concentration NA, metal work function {phi}m, oxide thickness d{sub ox}, mobile charge density N{sub m}, fixed oxide charge density N{sub ox} and the external back bias applied to the inversion grid V. The optimization results are compared with theoretical optimization and shows that the genetic algorithm can be used for determining the optimum parameters of the cell. (orig.)
Fractional Dynamics of Genetic Algorithms Using Hexagonal Space Tessellation
Directory of Open Access Journals (Sweden)
J. A. Tenreiro Machado
2013-01-01
Full Text Available The paper formulates a genetic algorithm that evolves two types of objects in a plane. The fitness function promotes a relationship between the objects that is optimal when some kind of interface between them occurs. Furthermore, the algorithm adopts an hexagonal tessellation of the two-dimensional space for promoting an efficient method of the neighbour modelling. The genetic algorithm produces special patterns with resemblances to those revealed in percolation phenomena or in the symbiosis found in lichens. Besides the analysis of the spacial layout, a modelling of the time evolution is performed by adopting a distance measure and the modelling in the Fourier domain in the perspective of fractional calculus. The results reveal a consistent, and easy to interpret, set of model parameters for distinct operating conditions.
Detecting structural breaks in time series via genetic algorithms
DEFF Research Database (Denmark)
Doerr, Benjamin; Fischer, Paul; Hilbert, Astrid
2016-01-01
of the time series under consideration is available. Therefore, a black-box optimization approach is our method of choice for detecting structural breaks. We describe a genetic algorithm framework which easily adapts to a large number of statistical settings. To evaluate the usefulness of different crossover...... and mutation operations for this problem, we conduct extensive experiments to determine good choices for the parameters and operators of the genetic algorithm. One surprising observation is that use of uniform and one-point crossover together gave significantly better results than using either crossover...... operator alone. Moreover, we present a specific fitness function which exploits the sparse structure of the break points and which can be evaluated particularly efficiently. The experiments on artificial and real-world time series show that the resulting algorithm detects break points with high precision...
Textual and chemical information processing: different domains but similar algorithms
Directory of Open Access Journals (Sweden)
Peter Willett
2000-01-01
Full Text Available This paper discusses the extent to which algorithms developed for the processing of textual databases are also applicable to the processing of chemical structure databases, and vice versa. Applications discussed include: an algorithm for distribution sorting that has been applied to the design of screening systems for rapid chemical substructure searching; the use of measures of inter-molecular structural similarity for the analysis of hypertext graphs; a genetic algorithm for calculating term weights for relevance feedback searching for determining whether a molecule is likely to exhibit biological activity; and the use of data fusion to combine the results of different chemical similarity searches.
Genomic multiple sequence alignments: refinement using a genetic algorithm
Directory of Open Access Journals (Sweden)
Lefkowitz Elliot J
2005-08-01
Full Text Available Abstract Background Genomic sequence data cannot be fully appreciated in isolation. Comparative genomics – the practice of comparing genomic sequences from different species – plays an increasingly important role in understanding the genotypic differences between species that result in phenotypic differences as well as in revealing patterns of evolutionary relationships. One of the major challenges in comparative genomics is producing a high-quality alignment between two or more related genomic sequences. In recent years, a number of tools have been developed for aligning large genomic sequences. Most utilize heuristic strategies to identify a series of strong sequence similarities, which are then used as anchors to align the regions between the anchor points. The resulting alignment is globally correct, but in many cases is suboptimal locally. We describe a new program, GenAlignRefine, which improves the overall quality of global multiple alignments by using a genetic algorithm to improve local regions of alignment. Regions of low quality are identified, realigned using the program T-Coffee, and then refined using a genetic algorithm. Because a better COFFEE (Consistency based Objective Function For alignmEnt Evaluation score generally reflects greater alignment quality, the algorithm searches for an alignment that yields a better COFFEE score. To improve the intrinsic slowness of the genetic algorithm, GenAlignRefine was implemented as a parallel, cluster-based program. Results We tested the GenAlignRefine algorithm by running it on a Linux cluster to refine sequences from a simulation, as well as refine a multiple alignment of 15 Orthopoxvirus genomic sequences approximately 260,000 nucleotides in length that initially had been aligned by Multi-LAGAN. It took approximately 150 minutes for a 40-processor Linux cluster to optimize some 200 fuzzy (poorly aligned regions of the orthopoxvirus alignment. Overall sequence identity increased only
Genetic Algorithm Calibration of Probabilistic Cellular Automata for Modeling Mining Permit Activity
Louis, S.J.; Raines, G.L.
2003-01-01
We use a genetic algorithm to calibrate a spatially and temporally resolved cellular automata to model mining activity on public land in Idaho and western Montana. The genetic algorithm searches through a space of transition rule parameters of a two dimensional cellular automata model to find rule parameters that fit observed mining activity data. Previous work by one of the authors in calibrating the cellular automaton took weeks - the genetic algorithm takes a day and produces rules leading to about the same (or better) fit to observed data. These preliminary results indicate that genetic algorithms are a viable tool in calibrating cellular automata for this application. Experience gained during the calibration of this cellular automata suggests that mineral resource information is a critical factor in the quality of the results. With automated calibration, further refinements of how the mineral-resource information is provided to the cellular automaton will probably improve our model.
Directory of Open Access Journals (Sweden)
Ashutosh K. AGARWAL
2011-10-01
Full Text Available Genetic algorithms are robust search techniques based on the principles of evolution. A genetic algorithm maintains a population of encoded solutions and guides the population towards the optimum solution. This important property of genetic algorithm is used in this paper to stabilize the Inverted pendulum system. This paper highlights the application and stability of inverted pendulum using PID controller with fuzzy logic genetic algorithm supervisor . There are a large number of well established search techniques in use within the information technology industry. We propose a method to control inverted pendulum steady state error and overshoot using genetic algorithm technique.
Quantum lower bound for sorting
Shi, Yaoyun
2000-01-01
We prove that \\Omega(n log(n)) comparisons are necessary for any quantum algorithm that sorts n numbers with high success probability and uses only comparisons. If no error is allowed, at least 0.110nlog_2(n) - 0.067n + O(1) comparisons must be made. The previous known lower bound is \\Omega(n).
Real coded genetic algorithm for fuzzy time series prediction
Jain, Shilpa; Bisht, Dinesh C. S.; Singh, Phool; Mathpal, Prakash C.
2017-10-01
Genetic Algorithm (GA) forms a subset of evolutionary computing, rapidly growing area of Artificial Intelligence (A.I.). Some variants of GA are binary GA, real GA, messy GA, micro GA, saw tooth GA, differential evolution GA. This research article presents a real coded GA for predicting enrollments of University of Alabama. Data of Alabama University is a fuzzy time series. Here, fuzzy logic is used to predict enrollments of Alabama University and genetic algorithm optimizes fuzzy intervals. Results are compared to other eminent author works and found satisfactory, and states that real coded GA are fast and accurate.
PM Synchronous Motor Dynamic Modeling with Genetic Algorithm ...
African Journals Online (AJOL)
Adel
This paper proposes dynamic modeling simulation for ac Surface Permanent Magnet Synchronous ... Simulations are implemented using MATLAB with its genetic algorithm toolbox. .... selection, the process that drives biological evolution.
Lin, Ying Chih; Lu, Chin Lung; Chang, Hwan-You; Tang, Chuan Yi
2005-01-01
In the study of genome rearrangement, the block-interchanges have been proposed recently as a new kind of global rearrangement events affecting a genome by swapping two nonintersecting segments of any length. The so-called block-interchange distance problem, which is equivalent to the sorting-by-block-interchange problem, is to find a minimum series of block-interchanges for transforming one chromosome into another. In this paper, we study this problem by considering the circular chromosomes and propose a Omicron(deltan) time algorithm for solving it by making use of permutation groups in algebra, where n is the length of the circular chromosome and delta is the minimum number of block-interchanges required for the transformation, which can be calculated in Omicron(n) time in advance. Moreover, we obtain analogous results by extending our algorithm to linear chromosomes. Finally, we have implemented our algorithm and applied it to the circular genomic sequences of three human vibrio pathogens for predicting their evolutionary relationships. Consequently, our experimental results coincide with the previous ones obtained by others using a different comparative genomics approach, which implies that the block-interchange events seem to play a significant role in the evolution of vibrio species.
Genetic algorithms and Monte Carlo simulation for optimal plant design
International Nuclear Information System (INIS)
Cantoni, M.; Marseguerra, M.; Zio, E.
2000-01-01
We present an approach to the optimal plant design (choice of system layout and components) under conflicting safety and economic constraints, based upon the coupling of a Monte Carlo evaluation of plant operation with a Genetic Algorithms-maximization procedure. The Monte Carlo simulation model provides a flexible tool, which enables one to describe relevant aspects of plant design and operation, such as standby modes and deteriorating repairs, not easily captured by analytical models. The effects of deteriorating repairs are described by means of a modified Brown-Proschan model of imperfect repair which accounts for the possibility of an increased proneness to failure of a component after a repair. The transitions of a component from standby to active, and vice versa, are simulated using a multiplicative correlation model. The genetic algorithms procedure is demanded to optimize a profit function which accounts for the plant safety and economic performance and which is evaluated, for each possible design, by the above Monte Carlo simulation. In order to avoid an overwhelming use of computer time, for each potential solution proposed by the genetic algorithm, we perform only few hundreds Monte Carlo histories and, then, exploit the fact that during the genetic algorithm population evolution, the fit chromosomes appear repeatedly many times, so that the results for the solutions of interest (i.e. the best ones) attain statistical significance
A hybrid niched-island genetic algorithm applied to a nuclear core optimization problem
International Nuclear Information System (INIS)
Pereira, Claudio M.N.A.
2005-01-01
Diversity maintenance is a key-feature in most genetic-based optimization processes. The quest for such characteristic, has been motivating improvements in the original genetic algorithm (GA). The use of multiple populations (called islands) has demonstrating to increase diversity, delaying the genetic drift. Island Genetic Algorithms (IGA) lead to better results, however, the drift is only delayed, but not avoided. An important advantage of this approach is the simplicity and efficiency for parallel processing. Diversity can also be improved by the use of niching techniques. Niched Genetic Algorithms (NGA) are able to avoid the genetic drift, by containing evolution in niches of a single-population GA, however computational cost is increased. In this work it is investigated the use of a hybrid Niched-Island Genetic Algorithm (NIGA) in a nuclear core optimization problem found in literature. Computational experiments demonstrate that it is possible to take advantage of both, performance enhancement due to the parallelism and drift avoidance due to the use of niches. Comparative results shown that the proposed NIGA demonstrated to be more efficient and robust than an IGA and a NGA for solving the proposed optimization problem. (author)
Research and application of multi-agent genetic algorithm in tower defense game
Jin, Shaohua
2018-04-01
In this paper, a new multi-agent genetic algorithm based on orthogonal experiment is proposed, which is based on multi-agent system, genetic algorithm and orthogonal experimental design. The design of neighborhood competition operator, orthogonal crossover operator, Son and self-learning operator. The new algorithm is applied to mobile tower defense game, according to the characteristics of the game, the establishment of mathematical models, and finally increases the value of the game's monster.
Genetic Algorithm (GA Method for Optimization of Multi-Reservoir Systems Operation
Directory of Open Access Journals (Sweden)
Shervin Momtahen
2006-01-01
Full Text Available A Genetic Algorithm (GA method for optimization of multi-reservoir systems operation is proposed in this paper. In this method, the parameters of operating policies are optimized using system simulation results. Hence, any operating problem with any sort of objective function, constraints and structure of operating policy can be optimized by GA. The method is applied to a 3-reservoir system and is compared with two traditional methods of Stochastic Dynamic Programming and Dynamic Programming and Regression. The results show that GA is superior both in objective function value and in computational speed. The proposed method is further improved using a mutation power updating rule and a varying period simulation method. The later is a novel procedure proposed in this paper that is believed to help in solving computational time problem in large systems. These revisions are evaluated and proved to be very useful in converging to better solutions in much less time. The final GA method is eventually evaluated as a very efficient procedure that is able to solve problems of large multi-reservoir system which is usually impossible by traditional methods. In fact, the real performance of the GA method starts where others fail to function.
Fashion sketch design by interactive genetic algorithms
Mok, P. Y.; Wang, X. X.; Xu, J.; Kwok, Y. L.
2012-11-01
Computer aided design is vitally important for the modern industry, particularly for the creative industry. Fashion industry faced intensive challenges to shorten the product development process. In this paper, a methodology is proposed for sketch design based on interactive genetic algorithms. The sketch design system consists of a sketch design model, a database and a multi-stage sketch design engine. First, a sketch design model is developed based on the knowledge of fashion design to describe fashion product characteristics by using parameters. Second, a database is built based on the proposed sketch design model to define general style elements. Third, a multi-stage sketch design engine is used to construct the design. Moreover, an interactive genetic algorithm (IGA) is used to accelerate the sketch design process. The experimental results have demonstrated that the proposed method is effective in helping laypersons achieve satisfied fashion design sketches.
An Improved Hierarchical Genetic Algorithm for Sheet Cutting Scheduling with Process Constraints
Directory of Open Access Journals (Sweden)
Yunqing Rao
2013-01-01
Full Text Available For the first time, an improved hierarchical genetic algorithm for sheet cutting problem which involves n cutting patterns for m non-identical parallel machines with process constraints has been proposed in the integrated cutting stock model. The objective of the cutting scheduling problem is minimizing the weighted completed time. A mathematical model for this problem is presented, an improved hierarchical genetic algorithm (ant colony—hierarchical genetic algorithm is developed for better solution, and a hierarchical coding method is used based on the characteristics of the problem. Furthermore, to speed up convergence rates and resolve local convergence issues, a kind of adaptive crossover probability and mutation probability is used in this algorithm. The computational result and comparison prove that the presented approach is quite effective for the considered problem.
An improved hierarchical genetic algorithm for sheet cutting scheduling with process constraints.
Rao, Yunqing; Qi, Dezhong; Li, Jinling
2013-01-01
For the first time, an improved hierarchical genetic algorithm for sheet cutting problem which involves n cutting patterns for m non-identical parallel machines with process constraints has been proposed in the integrated cutting stock model. The objective of the cutting scheduling problem is minimizing the weighted completed time. A mathematical model for this problem is presented, an improved hierarchical genetic algorithm (ant colony--hierarchical genetic algorithm) is developed for better solution, and a hierarchical coding method is used based on the characteristics of the problem. Furthermore, to speed up convergence rates and resolve local convergence issues, a kind of adaptive crossover probability and mutation probability is used in this algorithm. The computational result and comparison prove that the presented approach is quite effective for the considered problem.
Increasing Prediction the Original Final Year Project of Student Using Genetic Algorithm
Saragih, Rijois Iboy Erwin; Turnip, Mardi; Sitanggang, Delima; Aritonang, Mendarissan; Harianja, Eva
2018-04-01
Final year project is very important forgraduation study of a student. Unfortunately, many students are not seriouslydidtheir final projects. Many of studentsask for someone to do it for them. In this paper, an application of genetic algorithms to predict the original final year project of a studentis proposed. In the simulation, the data of the final project for the last 5 years is collected. The genetic algorithm has several operators namely population, selection, crossover, and mutation. The result suggest that genetic algorithm can do better prediction than other comparable model. Experimental results of predicting showed that 70% was more accurate than the previous researched.
Efficient Sorting on the Tilera Manycore Architecture
Energy Technology Data Exchange (ETDEWEB)
Morari, Alessandro; Tumeo, Antonino; Villa, Oreste; Secchi, Simone; Valero, Mateo
2012-10-24
e present an efficient implementation of the radix sort algo- rithm for the Tilera TILEPro64 processor. The TILEPro64 is one of the first successful commercial manycore processors. It is com- posed of 64 tiles interconnected through multiple fast Networks- on-chip and features a fully coherent, shared distributed cache. The architecture has a large degree of flexibility, and allows various optimization strategies. We describe how we mapped the algorithm to this architecture. We present an in-depth analysis of the optimizations for each phase of the algorithm with respect to the processor’s sustained performance. We discuss the overall throughput reached by our radix sort implementation (up to 132 MK/s) and show that it provides comparable or better performance-per-watt with respect to state-of-the art implemen- tations on x86 processors and graphic processing units.
Genetic algorithm enhanced by machine learning in dynamic aperture optimization
Li, Yongjun; Cheng, Weixing; Yu, Li Hua; Rainer, Robert
2018-05-01
With the aid of machine learning techniques, the genetic algorithm has been enhanced and applied to the multi-objective optimization problem presented by the dynamic aperture of the National Synchrotron Light Source II (NSLS-II) Storage Ring. During the evolution processes employed by the genetic algorithm, the population is classified into different clusters in the search space. The clusters with top average fitness are given "elite" status. Intervention on the population is implemented by repopulating some potentially competitive candidates based on the experience learned from the accumulated data. These candidates replace randomly selected candidates among the original data pool. The average fitness of the population is therefore improved while diversity is not lost. Maintaining diversity ensures that the optimization is global rather than local. The quality of the population increases and produces more competitive descendants accelerating the evolution process significantly. When identifying the distribution of optimal candidates, they appear to be located in isolated islands within the search space. Some of these optimal candidates have been experimentally confirmed at the NSLS-II storage ring. The machine learning techniques that exploit the genetic algorithm can also be used in other population-based optimization problems such as particle swarm algorithm.
Nuclear reactors project optimization based on neural network and genetic algorithm
International Nuclear Information System (INIS)
Pereira, Claudio M.N.A.; Schirru, Roberto; Martinez, Aquilino S.
1997-01-01
This work presents a prototype of a system for nuclear reactor core design optimization based on genetic algorithms and artificial neural networks. A neural network is modeled and trained in order to predict the flux and the neutron multiplication factor values based in the enrichment, network pitch and cladding thickness, with average error less than 2%. The values predicted by the neural network are used by a genetic algorithm in this heuristic search, guided by an objective function that rewards the high flux values and penalizes multiplication factors far from the required value. Associating the quick prediction - that may substitute the reactor physics calculation code - with the global optimization capacity of the genetic algorithm, it was obtained a quick and effective system for nuclear reactor core design optimization. (author). 11 refs., 8 figs., 3 tabs
Genetic algorithms: Theory and applications in the safety domain
International Nuclear Information System (INIS)
Marseguerra, M.; Zio, E.
2001-01-01
This work illustrates the fundamentals underlying optimization by genetic algorithms. All the steps of the procedure are sketched in details for both the traditional breeding algorithm as well as for more sophisticated breeding procedures. The necessity of affine transforming the fitness function, object of the optimization, is discussed in detail, together with the transformation itself. Procedures for the inducement of species and niches are also presented. The theoretical aspects of the work are corroborated by a demonstration of the potential of genetic algorithm optimization procedures on three different case studies. The first case study deals with the design of the pressure stages of a natural gas pipeline system; the second one treats a reliability allocation problem in system configuration design; the last case regards the selection of maintenance and repair strategies for the logistic management of a risky plant. (author)
Multiple depots vehicle routing based on the ant colony with the genetic algorithm
Directory of Open Access Journals (Sweden)
ChunYing Liu
2013-09-01
Full Text Available Purpose: the distribution routing plans of multi-depots vehicle scheduling problem will increase exponentially along with the adding of customers. So, it becomes an important studying trend to solve the vehicle scheduling problem with heuristic algorithm. On the basis of building the model of multi-depots vehicle scheduling problem, in order to improve the efficiency of the multiple depots vehicle routing, the paper puts forward a fusion algorithm on multiple depots vehicle routing based on the ant colony algorithm with genetic algorithm. Design/methodology/approach: to achieve this objective, the genetic algorithm optimizes the parameters of the ant colony algorithm. The fusion algorithm on multiple depots vehicle based on the ant colony algorithm with genetic algorithm is proposed. Findings: simulation experiment indicates that the result of the fusion algorithm is more excellent than the other algorithm, and the improved algorithm has better convergence effective and global ability. Research limitations/implications: in this research, there are some assumption that might affect the accuracy of the model such as the pheromone volatile factor, heuristic factor in each period, and the selected multiple depots. These assumptions can be relaxed in future work. Originality/value: In this research, a new method for the multiple depots vehicle routing is proposed. The fusion algorithm eliminate the influence of the selected parameter by optimizing the heuristic factor, evaporation factor, initial pheromone distribute, and have the strong global searching ability. The Ant Colony algorithm imports cross operator and mutation operator for operating the first best solution and the second best solution in every iteration, and reserves the best solution. The cross and mutation operator extend the solution space and improve the convergence effective and the global ability. This research shows that considering both the ant colony and genetic algorithm
A Case Study of a Multiobjective Elitist Recombinative Genetic Algorithm with Coevolutionary Sharing
Neef, R.M.; Thierens, D.; Arciszewski, H.F.R.
1999-01-01
We present a multiobjective genetic algorithm that incorporates various genetic algorithm techniques that have been proven to be efficient and robust in their problem domain. More specifically, we integrate rank based selection, adaptive niching through coevolutionary sharing, elitist recombination,
Directory of Open Access Journals (Sweden)
Qiuhong Sun
2014-04-01
Full Text Available Based on the data mining research, the data mining based on genetic algorithm method, the genetic algorithm is briefly introduced, while the genetic algorithm based on two important theories and theoretical templates principle implicit parallelism is also discussed. Focuses on the application of genetic algorithms for association rule mining method based on association rule mining, this paper proposes a genetic algorithm fitness function structure, data encoding, such as the title of the improvement program, in particular through the early issues study, proposed the improved adaptive Pc, Pm algorithm is applied to the genetic algorithm, thereby improving efficiency of the algorithm. Finally, a genetic algorithm based association rule mining algorithm, and be applied in sea water samples database in data mining and prove its effective.
Research on fault diagnosis of nuclear power plants based on genetic algorithms and fuzzy logic
International Nuclear Information System (INIS)
Zhou Yangping; Zhao Bingquan
2001-01-01
Based on genetic algorithms and fuzzy logic and using expert knowledge, mini-knowledge tree model and standard signals from simulator, a new fuzzy-genetic method is developed to fault diagnosis in nuclear power plants. A new replacement method of genetic algorithms is adopted. Fuzzy logic is used to calculate the fitness of the strings in genetic algorithms. Experiments on the simulator show it can deal with the uncertainty and the fuzzy factor
Fundamental Parallel Algorithms for Private-Cache Chip Multiprocessors
DEFF Research Database (Denmark)
Arge, Lars Allan; Goodrich, Michael T.; Nelson, Michael
2008-01-01
about the way cores are interconnected, for we assume that all inter-processor communication occurs through the memory hierarchy. We study several fundamental problems, including prefix sums, selection, and sorting, which often form the building blocks of other parallel algorithms. Indeed, we present...... two sorting algorithms, a distribution sort and a mergesort. Our algorithms are asymptotically optimal in terms of parallel cache accesses and space complexity under reasonable assumptions about the relationships between the number of processors, the size of memory, and the size of cache blocks....... In addition, we study sorting lower bounds in a computational model, which we call the parallel external-memory (PEM) model, that formalizes the essential properties of our algorithms for private-cache CMPs....
Application of genetic algorithm in radio ecological models parameter determination
Energy Technology Data Exchange (ETDEWEB)
Pantelic, G. [Institute of Occupatioanl Health and Radiological Protection ' Dr Dragomir Karajovic' , Belgrade (Serbia)
2006-07-01
The method of genetic algorithms was used to determine the biological half-life of 137 Cs in cow milk after the accident in Chernobyl. Methodologically genetic algorithms are based on the fact that natural processes tend to optimize themselves and therefore this method should be more efficient in providing optimal solutions in the modeling of radio ecological and environmental events. The calculated biological half-life of 137 Cs in milk is (32 {+-} 3) days and transfer coefficient from grass to milk is (0.019 {+-} 0.005). (authors)
A simple model based magnet sorting algorithm for planar hybrid undulators
International Nuclear Information System (INIS)
Rakowsky, G.
2010-01-01
Various magnet sorting strategies have been used to optimize undulator performance, ranging from intuitive pairing of high- and low-strength magnets, to full 3D FEM simulation with 3-axis Helmholtz coil magnet data. In the extreme, swapping magnets in a full field model to minimize trajectory wander and rms phase error can be time consuming. This paper presents a simpler approach, extending the field error signature concept to obtain trajectory displacement, kick angle and phase error signatures for each component of magnetization error from a Radia model of a short hybrid-PM undulator. We demonstrate that steering errors and phase errors are essentially decoupled and scalable from measured X, Y and Z components of magnetization. Then, for any given sequence of magnets, rms trajectory and phase errors are obtained from simple cumulative sums of the scaled displacements and phase errors. The cost function (a weighted sum of these errors) is then minimized by swapping magnets, using one's favorite optimization algorithm. This approach was applied recently at NSLS to a short in-vacuum undulator, which required no subsequent trajectory or phase shimming. Trajectory and phase signatures are also obtained for some mechanical errors, to guide 'virtual shimming' and specifying mechanical tolerances. Some simple inhomogeneities are modeled to assess their error contributions.
Genetic algorithms with memory- and elitism-based immigrants in dynamic environments
Yang, S
2008-01-01
Copyright @ 2008 by the Massachusetts Institute of Technology In recent years the genetic algorithm community has shown a growing interest in studying dynamic optimization problems. Several approaches have been devised. The random immigrants and memory schemes are two major ones. The random immigrants scheme addresses dynamic environments by maintaining the population diversity while the memory scheme aims to adapt genetic algorithms quickly to new environments by reusing historical inform...
Multiobjective Economic Load Dispatch in 3-D Space by Genetic Algorithm
Jain, N. K.; Nangia, Uma; Singh, Iqbal
2017-10-01
This paper presents the application of genetic algorithm to Multiobjective Economic Load Dispatch (MELD) problem considering fuel cost, transmission losses and environmental pollution as objective functions. The MELD problem has been formulated using constraint method. The non-inferior set for IEEE 5, 14 and 30-bus system has been generated by using genetic algorithm and the target point has been obtained by using maximization of minimum relative attainments.
Series Hybrid Electric Vehicle Power System Optimization Based on Genetic Algorithm
Zhu, Tianjun; Li, Bin; Zong, Changfu; Wu, Yang
2017-09-01
Hybrid electric vehicles (HEV), compared with conventional vehicles, have complex structures and more component parameters. If variables optimization designs are carried on all these parameters, it will increase the difficulty and the convergence of algorithm program, so this paper chooses the parameters which has a major influence on the vehicle fuel consumption to make it all work at maximum efficiency. First, HEV powertrain components modelling are built. Second, taking a tandem hybrid structure as an example, genetic algorithm is used in this paper to optimize fuel consumption and emissions. Simulation results in ADVISOR verify the feasibility of the proposed genetic optimization algorithm.
Optimal recombination in genetic algorithms for combinatorial optimization problems: Part II
Directory of Open Access Journals (Sweden)
Eremeev Anton V.
2014-01-01
Full Text Available This paper surveys results on complexity of the optimal recombination problem (ORP, which consists in finding the best possible offspring as a result of a recombination operator in a genetic algorithm, given two parent solutions. In Part II, we consider the computational complexity of ORPs arising in genetic algorithms for problems on permutations: the Travelling Salesman Problem, the Shortest Hamilton Path Problem and the Makespan Minimization on Single Machine and some other related problems. The analysis indicates that the corresponding ORPs are NP-hard, but solvable by faster algorithms, compared to the problems they are derived from.
A Genetic Algorithms Based Approach for Identification of Escherichia coli Fed-batch Fermentation
Directory of Open Access Journals (Sweden)
Olympia Roeva
2004-10-01
Full Text Available This paper presents the use of genetic algorithms for identification of Escherichia coli fed-batch fermentation process. Genetic algorithms are a directed random search technique, based on the mechanics of natural selection and natural genetics, which can find the global optimal solution in complex multidimensional search space. The dynamic behavior of considered process has known nonlinear structure, described with a system of deterministic nonlinear differential equations according to the mass balance. The parameters of the model are estimated using genetic algorithms. Simulation examples for demonstration of the effectiveness and robustness of the proposed identification scheme are included. As a result, the model accurately predicts the process of cultivation of E. coli.
A genetic algorithm for solving supply chain network design model
Firoozi, Z.; Ismail, N.; Ariafar, S. H.; Tang, S. H.; Ariffin, M. K. M. A.
2013-09-01
Network design is by nature costly and optimization models play significant role in reducing the unnecessary cost components of a distribution network. This study proposes a genetic algorithm to solve a distribution network design model. The structure of the chromosome in the proposed algorithm is defined in a novel way that in addition to producing feasible solutions, it also reduces the computational complexity of the algorithm. Computational results are presented to show the algorithm performance.
Parameter determination for quantitative PIXE analysis using genetic algorithms
International Nuclear Information System (INIS)
Aspiazu, J.; Belmont-Moreno, E.
1996-01-01
For biological and environmental samples, PIXE technique is in particular advantage for elemental analysis, but the quantitative analysis implies accomplishing complex calculations that require the knowledge of more than a dozen parameters. Using a genetic algorithm, the authors give here an account of the procedure to obtain the best values for the parameters necessary to fit the efficiency for a X-ray detector. The values for some variables involved in quantitative PIXE analysis, were manipulated in a similar way as the genetic information is treated in a biological process. The authors carried out the algorithm until they reproduce, within the confidence interval, the elemental concentrations corresponding to a reference material
Genetic algorithm optimization of atomic clusters
International Nuclear Information System (INIS)
Morris, J.R.; Deaven, D.M.; Ho, K.M.; Wang, C.Z.; Pan, B.C.; Wacker, J.G.; Turner, D.E.; Iowa State Univ., Ames, IA
1996-01-01
The authors have been using genetic algorithms to study the structures of atomic clusters and related problems. This is a problem where local minima are easy to locate, but barriers between the many minima are large, and the number of minima prohibit a systematic search. They use a novel mating algorithm that preserves some of the geometrical relationship between atoms, in order to ensure that the resultant structures are likely to inherit the best features of the parent clusters. Using this approach, they have been able to find lower energy structures than had been previously obtained. Most recently, they have been able to turn around the building block idea, using optimized structures from the GA to learn about systematic structural trends. They believe that an effective GA can help provide such heuristic information, and (conversely) that such information can be introduced back into the algorithm to assist in the search process
Time-Delay System Identification Using Genetic Algorithm
DEFF Research Database (Denmark)
Yang, Zhenyu; Seested, Glen Thane
2013-01-01
problem through an identification approach using the real coded Genetic Algorithm (GA). The desired FOPDT/SOPDT model is directly identified based on the measured system's input and output data. In order to evaluate the quality and performance of this GA-based approach, the proposed method is compared...
Cause and effect analysis by fuzzy relational equations and a genetic algorithm
International Nuclear Information System (INIS)
Rotshtein, Alexander P.; Posner, Morton; Rakytyanska, Hanna B.
2006-01-01
This paper proposes using a genetic algorithm as a tool to solve the fault diagnosis problem. The fault diagnosis problem is based on a cause and effect analysis which is formally described by fuzzy relations. Fuzzy relations are formed on the basis of expert assessments. Application of expert fuzzy relations to restore and identify the causes through the observed effects requires the solution to a system of fuzzy relational equations. In this study this search for a solution amounts to solving a corresponding optimization problem. An optimization algorithm is based on the application of genetic operations of crossover, mutation and selection. The genetic algorithm suggested here represents an application in expert systems of fault diagnosis and quality control
Differential evolution enhanced with multiobjective sorting-based mutation operators.
Wang, Jiahai; Liao, Jianjun; Zhou, Ying; Cai, Yiqiao
2014-12-01
Differential evolution (DE) is a simple and powerful population-based evolutionary algorithm. The salient feature of DE lies in its mutation mechanism. Generally, the parents in the mutation operator of DE are randomly selected from the population. Hence, all vectors are equally likely to be selected as parents without selective pressure at all. Additionally, the diversity information is always ignored. In order to fully exploit the fitness and diversity information of the population, this paper presents a DE framework with multiobjective sorting-based mutation operator. In the proposed mutation operator, individuals in the current population are firstly sorted according to their fitness and diversity contribution by nondominated sorting. Then parents in the mutation operators are proportionally selected according to their rankings based on fitness and diversity, thus, the promising individuals with better fitness and diversity have more opportunity to be selected as parents. Since fitness and diversity information is simultaneously considered for parent selection, a good balance between exploration and exploitation can be achieved. The proposed operator is applied to original DE algorithms, as well as several advanced DE variants. Experimental results on 48 benchmark functions and 12 real-world application problems show that the proposed operator is an effective approach to enhance the performance of most DE algorithms studied.
Sorting method to extend the dynamic range of the Shack-Hartmann wave-front sensor
International Nuclear Information System (INIS)
Lee, Junwon; Shack, Roland V.; Descour, Michael R.
2005-01-01
We propose a simple and powerful algorithm to extend the dynamic range of a Shack-Hartmann wave-front sensor. In a conventional Shack-Hartmann wave-front sensor the dynamic range is limited by the f-number of a lenslet, because the focal spot is required to remain in the area confined by the single lenslet. The sorting method proposed here eliminates such a limitation and extends the dynamic range by tagging each spot in a special sequence. Since the sorting method is a simple algorithm that does not change the measurement configuration, there is no requirement for extra hardware, multiple measurements, or complicated algorithms. We not only present the theory and a calculation example of the sorting method but also actually implement measurement of a highly aberrated wave front from nonrotational symmetric optics
Virus evolutionary genetic algorithm for task collaboration of logistics distribution
Ning, Fanghua; Chen, Zichen; Xiong, Li
2005-12-01
In order to achieve JIT (Just-In-Time) level and clients' maximum satisfaction in logistics collaboration, a Virus Evolutionary Genetic Algorithm (VEGA) was put forward under double constraints of logistics resource and operation sequence. Based on mathematic description of a multiple objective function, the algorithm was designed to schedule logistics tasks with different due dates and allocate them to network members. By introducing a penalty item, make span and customers' satisfaction were expressed in fitness function. And a dynamic adaptive probability of infection was used to improve performance of local search. Compared to standard Genetic Algorithm (GA), experimental result illustrates the performance superiority of VEGA. So the VEGA can provide a powerful decision-making technique for optimizing resource configuration in logistics network.
Application of genetic algorithm in radio ecological models parameter determination
International Nuclear Information System (INIS)
Pantelic, G.
2006-01-01
The method of genetic algorithms was used to determine the biological half-life of 137 Cs in cow milk after the accident in Chernobyl. Methodologically genetic algorithms are based on the fact that natural processes tend to optimize themselves and therefore this method should be more efficient in providing optimal solutions in the modeling of radio ecological and environmental events. The calculated biological half-life of 137 Cs in milk is (32 ± 3) days and transfer coefficient from grass to milk is (0.019 ± 0.005). (authors)
Consensus-Based Sorting of Neuronal Spike Waveforms.
Fournier, Julien; Mueller, Christian M; Shein-Idelson, Mark; Hemberger, Mike; Laurent, Gilles
2016-01-01
Optimizing spike-sorting algorithms is difficult because sorted clusters can rarely be checked against independently obtained "ground truth" data. In most spike-sorting algorithms in use today, the optimality of a clustering solution is assessed relative to some assumption on the distribution of the spike shapes associated with a particular single unit (e.g., Gaussianity) and by visual inspection of the clustering solution followed by manual validation. When the spatiotemporal waveforms of spikes from different cells overlap, the decision as to whether two spikes should be assigned to the same source can be quite subjective, if it is not based on reliable quantitative measures. We propose a new approach, whereby spike clusters are identified from the most consensual partition across an ensemble of clustering solutions. Using the variability of the clustering solutions across successive iterations of the same clustering algorithm (template matching based on K-means clusters), we estimate the probability of spikes being clustered together and identify groups of spikes that are not statistically distinguishable from one another. Thus, we identify spikes that are most likely to be clustered together and therefore correspond to consistent spike clusters. This method has the potential advantage that it does not rely on any model of the spike shapes. It also provides estimates of the proportion of misclassified spikes for each of the identified clusters. We tested our algorithm on several datasets for which there exists a ground truth (simultaneous intracellular data), and show that it performs close to the optimum reached by a support vector machine trained on the ground truth. We also show that the estimated rate of misclassification matches the proportion of misclassified spikes measured from the ground truth data.
High-Speed General Purpose Genetic Algorithm Processor.
Hoseini Alinodehi, Seyed Pourya; Moshfe, Sajjad; Saber Zaeimian, Masoumeh; Khoei, Abdollah; Hadidi, Khairollah
2016-07-01
In this paper, an ultrafast steady-state genetic algorithm processor (GAP) is presented. Due to the heavy computational load of genetic algorithms (GAs), they usually take a long time to find optimum solutions. Hardware implementation is a significant approach to overcome the problem by speeding up the GAs procedure. Hence, we designed a digital CMOS implementation of GA in [Formula: see text] process. The proposed processor is not bounded to a specific application. Indeed, it is a general-purpose processor, which is capable of performing optimization in any possible application. Utilizing speed-boosting techniques, such as pipeline scheme, parallel coarse-grained processing, parallel fitness computation, parallel selection of parents, dual-population scheme, and support for pipelined fitness computation, the proposed processor significantly reduces the processing time. Furthermore, by relying on a built-in discard operator the proposed hardware may be used in constrained problems that are very common in control applications. In the proposed design, a large search space is achievable through the bit string length extension of individuals in the genetic population by connecting the 32-bit GAPs. In addition, the proposed processor supports parallel processing, in which the GAs procedure can be run on several connected processors simultaneously.
Smoothsort, an alternative for sorting in situ
Dijkstra, E.W.
1982-01-01
Like heapsort - which inspired it - smoothsort is an algorithm for sorting in situ. It is of order N · log N in the worst case, but of order N in the best case, with a smooth transition between the two. (Hence its name.)
Cloning of Plasmodium falciparum by single-cell sorting.
Miao, Jun; Li, Xiaolian; Cui, Liwang
2010-10-01
Malaria parasite cloning is traditionally carried out mainly by using the limiting dilution method, which is laborious, imprecise, and unable to distinguish multiply-infected RBCs. In this study, we used a parasite engineered to express green fluorescent protein (GFP) to evaluate a single-cell sorting method for rapidly cloning Plasmodium falciparum. By dividing a two-dimensional scattergram from a cell sorter into 17 gates, we determined the parameters for isolating singly-infected erythrocytes and sorted them into individual cultures. Pre-gating of the engineered parasites for GFP allowed the isolation of almost 100% GFP-positive clones. Compared with the limiting dilution method, the number of parasite clones obtained by single-cell sorting was much higher. Molecular analyses showed that parasite isolates obtained by single-cell sorting were highly homogenous. This highly efficient single-cell sorting method should prove very useful for cloning both P. falciparum laboratory populations from genetic manipulation experiments and clinical samples. Copyright 2010 Elsevier Inc. All rights reserved.
Cloning of Plasmodium falciparum by single-cell sorting
Miao, Jun; Li, Xiaolian; Cui, Liwang
2010-01-01
Malaria parasite cloning is traditionally carried out mainly by using the limiting dilution method, which is laborious, imprecise, and unable to distinguish multiply-infected RBCs. In this study, we used a parasite engineered to express green fluorescent protein (GFP) to evaluate a single-cell sorting method for rapidly cloning Plasmodium falciparum. By dividing a two dimensional scattergram from a cell sorter into 17 gates, we determined the parameters for isolating singly-infected erythrocytes and sorted them into individual cultures. Pre-gating of the engineered parasites for GFP allowed the isolation of almost 100% GFP-positive clones. Compared with the limiting dilution method, the number of parasite clones obtained by single-cell sorting was much higher. Molecular analyses showed that parasite isolates obtained by single-cell sorting were highly homogenous. This highly efficient single-cell sorting method should prove very useful for cloning both P. falciparum laboratory populations from genetic manipulation experiments and clinical samples. PMID:20435038
DEFF Research Database (Denmark)
Ødegård, Jørgen; Meuwissen, Theo HE; Heringstad, Bjørg
2010-01-01
Background In the genetic analysis of binary traits with one observation per animal, animal threshold models frequently give biased heritability estimates. In some cases, this problem can be circumvented by fitting sire- or sire-dam models. However, these models are not appropriate in cases where...... records exist for the parents). Furthermore, the new algorithm showed much faster Markov chain mixing properties for genetic parameters (similar to the sire-dam model). Conclusions The new algorithm to estimate genetic parameters via Gibbs sampling solves the bias problems typically occurring in animal...... individual records exist on parents. Therefore, the aim of our study was to develop a new Gibbs sampling algorithm for a proper estimation of genetic (co)variance components within an animal threshold model framework. Methods In the proposed algorithm, individuals are classified as either "informative...
Genetic algorithm and neural network hybrid approach for job-shop scheduling
Zhao, Kai; Yang, Shengxiang; Wang, Dingwei
1998-01-01
Copyright @ 1998 ACTA Press This paper proposes a genetic algorithm (GA) and constraint satisfaction adaptive neural network (CSANN) hybrid approach for job-shop scheduling problems. In the hybrid approach, GA is used to iterate for searching optimal solutions, CSANN is used to obtain feasible solutions during the iteration of genetic algorithm. Simulations have shown the valid performance of the proposed hybrid approach for job-shop scheduling with respect to the quality of solutions and ...
Genetic algorithm based reactive power dispatch for voltage stability improvement
Energy Technology Data Exchange (ETDEWEB)
Devaraj, D. [Department of Electrical and Electronics, Kalasalingam University, Krishnankoil 626 190 (India); Roselyn, J. Preetha [Department of Electrical and Electronics, SRM University, Kattankulathur 603 203, Chennai (India)
2010-12-15
Voltage stability assessment and control form the core function in a modern energy control centre. This paper presents an improved Genetic algorithm (GA) approach for voltage stability enhancement. The proposed technique is based on the minimization of the maximum of L-indices of load buses. Generator voltages, switchable VAR sources and transformer tap changers are used as optimization variables of this problem. The proposed approach permits the optimization variables to be represented in their natural form in the genetic population. For effective genetic processing, the crossover and mutation operators which can directly deal with the floating point numbers and integers are used. The proposed algorithm has been tested on IEEE 30-bus and IEEE 57-bus test systems and successful results have been obtained. (author)
A new hybrid genetic algorithm for optimizing the single and multivariate objective functions
Energy Technology Data Exchange (ETDEWEB)
Tumuluru, Jaya Shankar [Idaho National Laboratory; McCulloch, Richard Chet James [Idaho National Laboratory
2015-07-01
In this work a new hybrid genetic algorithm was developed which combines a rudimentary adaptive steepest ascent hill climbing algorithm with a sophisticated evolutionary algorithm in order to optimize complex multivariate design problems. By combining a highly stochastic algorithm (evolutionary) with a simple deterministic optimization algorithm (adaptive steepest ascent) computational resources are conserved and the solution converges rapidly when compared to either algorithm alone. In genetic algorithms natural selection is mimicked by random events such as breeding and mutation. In the adaptive steepest ascent algorithm each variable is perturbed by a small amount and the variable that caused the most improvement is incremented by a small step. If the direction of most benefit is exactly opposite of the previous direction with the most benefit then the step size is reduced by a factor of 2, thus the step size adapts to the terrain. A graphical user interface was created in MATLAB to provide an interface between the hybrid genetic algorithm and the user. Additional features such as bounding the solution space and weighting the objective functions individually are also built into the interface. The algorithm developed was tested to optimize the functions developed for a wood pelleting process. Using process variables (such as feedstock moisture content, die speed, and preheating temperature) pellet properties were appropriately optimized. Specifically, variables were found which maximized unit density, bulk density, tapped density, and durability while minimizing pellet moisture content and specific energy consumption. The time and computational resources required for the optimization were dramatically decreased using the hybrid genetic algorithm when compared to MATLAB's native evolutionary optimization tool.
International Nuclear Information System (INIS)
Huang, Xiaobiao; Safranek, James
2014-01-01
Nonlinear dynamics optimization is carried out for a low emittance upgrade lattice of SPEAR3 in order to improve its dynamic aperture and Touschek lifetime. Two multi-objective optimization algorithms, a genetic algorithm and a particle swarm algorithm, are used for this study. The performance of the two algorithms are compared. The result shows that the particle swarm algorithm converges significantly faster to similar or better solutions than the genetic algorithm and it does not require seeding of good solutions in the initial population. These advantages of the particle swarm algorithm may make it more suitable for many accelerator optimization applications
Energy Technology Data Exchange (ETDEWEB)
Huang, Xiaobiao, E-mail: xiahuang@slac.stanford.edu; Safranek, James
2014-09-01
Nonlinear dynamics optimization is carried out for a low emittance upgrade lattice of SPEAR3 in order to improve its dynamic aperture and Touschek lifetime. Two multi-objective optimization algorithms, a genetic algorithm and a particle swarm algorithm, are used for this study. The performance of the two algorithms are compared. The result shows that the particle swarm algorithm converges significantly faster to similar or better solutions than the genetic algorithm and it does not require seeding of good solutions in the initial population. These advantages of the particle swarm algorithm may make it more suitable for many accelerator optimization applications.
Automatic online spike sorting with singular value decomposition and fuzzy C-mean clustering
Directory of Open Access Journals (Sweden)
Oliynyk Andriy
2012-08-01
Full Text Available Abstract Background Understanding how neurons contribute to perception, motor functions and cognition requires the reliable detection of spiking activity of individual neurons during a number of different experimental conditions. An important problem in computational neuroscience is thus to develop algorithms to automatically detect and sort the spiking activity of individual neurons from extracellular recordings. While many algorithms for spike sorting exist, the problem of accurate and fast online sorting still remains a challenging issue. Results Here we present a novel software tool, called FSPS (Fuzzy SPike Sorting, which is designed to optimize: (i fast and accurate detection, (ii offline sorting and (iii online classification of neuronal spikes with very limited or null human intervention. The method is based on a combination of Singular Value Decomposition for fast and highly accurate pre-processing of spike shapes, unsupervised Fuzzy C-mean, high-resolution alignment of extracted spike waveforms, optimal selection of the number of features to retain, automatic identification the number of clusters, and quantitative quality assessment of resulting clusters independent on their size. After being trained on a short testing data stream, the method can reliably perform supervised online classification and monitoring of single neuron activity. The generalized procedure has been implemented in our FSPS spike sorting software (available free for non-commercial academic applications at the address: http://www.spikesorting.com using LabVIEW (National Instruments, USA. We evaluated the performance of our algorithm both on benchmark simulated datasets with different levels of background noise and on real extracellular recordings from premotor cortex of Macaque monkeys. The results of these tests showed an excellent accuracy in discriminating low-amplitude and overlapping spikes under strong background noise. The performance of our method is
Automatic online spike sorting with singular value decomposition and fuzzy C-mean clustering.
Oliynyk, Andriy; Bonifazzi, Claudio; Montani, Fernando; Fadiga, Luciano
2012-08-08
Understanding how neurons contribute to perception, motor functions and cognition requires the reliable detection of spiking activity of individual neurons during a number of different experimental conditions. An important problem in computational neuroscience is thus to develop algorithms to automatically detect and sort the spiking activity of individual neurons from extracellular recordings. While many algorithms for spike sorting exist, the problem of accurate and fast online sorting still remains a challenging issue. Here we present a novel software tool, called FSPS (Fuzzy SPike Sorting), which is designed to optimize: (i) fast and accurate detection, (ii) offline sorting and (iii) online classification of neuronal spikes with very limited or null human intervention. The method is based on a combination of Singular Value Decomposition for fast and highly accurate pre-processing of spike shapes, unsupervised Fuzzy C-mean, high-resolution alignment of extracted spike waveforms, optimal selection of the number of features to retain, automatic identification the number of clusters, and quantitative quality assessment of resulting clusters independent on their size. After being trained on a short testing data stream, the method can reliably perform supervised online classification and monitoring of single neuron activity. The generalized procedure has been implemented in our FSPS spike sorting software (available free for non-commercial academic applications at the address: http://www.spikesorting.com) using LabVIEW (National Instruments, USA). We evaluated the performance of our algorithm both on benchmark simulated datasets with different levels of background noise and on real extracellular recordings from premotor cortex of Macaque monkeys. The results of these tests showed an excellent accuracy in discriminating low-amplitude and overlapping spikes under strong background noise. The performance of our method is competitive with respect to other robust spike
A New Multiobjective Evolutionary Algorithm for Community Detection in Dynamic Complex Networks
Directory of Open Access Journals (Sweden)
Guoqiang Chen
2013-01-01
Full Text Available Community detection in dynamic networks is an important research topic and has received an enormous amount of attention in recent years. Modularity is selected as a measure to quantify the quality of the community partition in previous detection methods. But, the modularity has been exposed to resolution limits. In this paper, we propose a novel multiobjective evolutionary algorithm for dynamic networks community detection based on the framework of nondominated sorting genetic algorithm. Modularity density which can address the limitations of modularity function is adopted to measure the snapshot cost, and normalized mutual information is selected to measure temporal cost, respectively. The characteristics knowledge of the problem is used in designing the genetic operators. Furthermore, a local search operator was designed, which can improve the effectiveness and efficiency of community detection. Experimental studies based on synthetic datasets show that the proposed algorithm can obtain better performance than the compared algorithms.
Robust spike sorting of retinal ganglion cells tuned to spot stimuli.
Ghahari, Alireza; Badea, Tudor C
2016-08-01
We propose an automatic spike sorting approach for the data recorded from a microelectrode array during visual stimulation of wild type retinas with tiled spot stimuli. The approach first detects individual spikes per electrode by their signature local minima. With the mixture probability distribution of the local minima estimated afterwards, it applies a minimum-squared-error clustering algorithm to sort the spikes into different clusters. A template waveform for each cluster per electrode is defined, and a number of reliability tests are performed on it and its corresponding spikes. Finally, a divisive hierarchical clustering algorithm is used to deal with the correlated templates per cluster type across all the electrodes. According to the measures of performance of the spike sorting approach, it is robust even in the cases of recordings with low signal-to-noise ratio.
Application of the genetic algorithm to blume-emery-griffiths model: Test Cases
International Nuclear Information System (INIS)
Erdinc, A.
2004-01-01
The equilibrium properties of the Blume-Emery-Griffiths (BEO) model Hamiltonian with the arbitrary bilinear (1), biquadratic (K) and crystal field interaction (D) are studied using the genetic algorithm technique. Results are compared with lowest approximation of the cluster variation method (CVM), which is identical to the mean field approximation. We found that the genetic algorithm to be very efficient for fast search at the average fraction of the spins, especially in the early stages as the system is far from the equilibrium state. A combination of the genetic algorithm followed by one of the well-tested simulation techniques seems to be an optimal approach. The curvature of the inverse magnetic susceptibility is also presented for the stable state of the BEG model
A Hybrid Neural Network-Genetic Algorithm Technique for Aircraft Engine Performance Diagnostics
Kobayashi, Takahisa; Simon, Donald L.
2001-01-01
In this paper, a model-based diagnostic method, which utilizes Neural Networks and Genetic Algorithms, is investigated. Neural networks are applied to estimate the engine internal health, and Genetic Algorithms are applied for sensor bias detection and estimation. This hybrid approach takes advantage of the nonlinear estimation capability provided by neural networks while improving the robustness to measurement uncertainty through the application of Genetic Algorithms. The hybrid diagnostic technique also has the ability to rank multiple potential solutions for a given set of anomalous sensor measurements in order to reduce false alarms and missed detections. The performance of the hybrid diagnostic technique is evaluated through some case studies derived from a turbofan engine simulation. The results show this approach is promising for reliable diagnostics of aircraft engines.
A correctness proof of sorting by means of formal procedures
Fokkinga, M.M.
1987-01-01
We consider a recursive sorting algorithm in which, in each invocation, a new variable and a new procedure (using the variable globally) are defined and the procedure is passed to recursive calls. This algorithm is proved correct with Hoare-style pre- and postassertions. We also discuss the same
An Efficient VLSI Architecture for Multi-Channel Spike Sorting Using a Generalized Hebbian Algorithm
Directory of Open Access Journals (Sweden)
Ying-Lun Chen
2015-08-01
Full Text Available A novel VLSI architecture for multi-channel online spike sorting is presented in this paper. In the architecture, the spike detection is based on nonlinear energy operator (NEO, and the feature extraction is carried out by the generalized Hebbian algorithm (GHA. To lower the power consumption and area costs of the circuits, all of the channels share the same core for spike detection and feature extraction operations. Each channel has dedicated buffers for storing the detected spikes and the principal components of that channel. The proposed circuit also contains a clock gating system supplying the clock to only the buffers of channels currently using the computation core to further reduce the power consumption. The architecture has been implemented by an application-specific integrated circuit (ASIC with 90-nm technology. Comparisons to the existing works show that the proposed architecture has lower power consumption and hardware area costs for real-time multi-channel spike detection and feature extraction.
Chen, Ying-Lun; Hwang, Wen-Jyi; Ke, Chi-En
2015-08-13
A novel VLSI architecture for multi-channel online spike sorting is presented in this paper. In the architecture, the spike detection is based on nonlinear energy operator (NEO), and the feature extraction is carried out by the generalized Hebbian algorithm (GHA). To lower the power consumption and area costs of the circuits, all of the channels share the same core for spike detection and feature extraction operations. Each channel has dedicated buffers for storing the detected spikes and the principal components of that channel. The proposed circuit also contains a clock gating system supplying the clock to only the buffers of channels currently using the computation core to further reduce the power consumption. The architecture has been implemented by an application-specific integrated circuit (ASIC) with 90-nm technology. Comparisons to the existing works show that the proposed architecture has lower power consumption and hardware area costs for real-time multi-channel spike detection and feature extraction.
An Efficient VLSI Architecture for Multi-Channel Spike Sorting Using a Generalized Hebbian Algorithm
Chen, Ying-Lun; Hwang, Wen-Jyi; Ke, Chi-En
2015-01-01
A novel VLSI architecture for multi-channel online spike sorting is presented in this paper. In the architecture, the spike detection is based on nonlinear energy operator (NEO), and the feature extraction is carried out by the generalized Hebbian algorithm (GHA). To lower the power consumption and area costs of the circuits, all of the channels share the same core for spike detection and feature extraction operations. Each channel has dedicated buffers for storing the detected spikes and the principal components of that channel. The proposed circuit also contains a clock gating system supplying the clock to only the buffers of channels currently using the computation core to further reduce the power consumption. The architecture has been implemented by an application-specific integrated circuit (ASIC) with 90-nm technology. Comparisons to the existing works show that the proposed architecture has lower power consumption and hardware area costs for real-time multi-channel spike detection and feature extraction. PMID:26287193
Improved Sorting-Based Procedure for Integer Programming
DEFF Research Database (Denmark)
Dantchev, Stefan
2002-01-01
Recently, Cornuéjols and Dawande have considered a special class of 0-1 programs that turns out to be hard for existing IP solvers. One of them is a sorting-based algorithm, based on an idea of Wolsey. In this paper, we show how to improve both the running time and the space requirements...... of this algorithm. The drastic reduction of space needed allows us to solve much larger instances than was possible before using this technique....
A Constrained Genetic Algorithm with Adaptively Defined Fitness Function in MRS Quantification
Papakostas, G. A.; Karras, D. A.; Mertzios, B. G.; Graveron-Demilly, D.; van Ormondt, D.
MRS Signal quantification is a rather involved procedure and has attracted the interest of the medical engineering community, regarding the development of computationally efficient methodologies. Significant contributions based on Computational Intelligence tools, such as Neural Networks (NNs), demonstrated a good performance but not without drawbacks already discussed by the authors. On the other hand preliminary application of Genetic Algorithms (GA) has already been reported in the literature by the authors regarding the peak detection problem encountered in MRS quantification using the Voigt line shape model. This paper investigates a novel constrained genetic algorithm involving a generic and adaptively defined fitness function which extends the simple genetic algorithm methodology in case of noisy signals. The applicability of this new algorithm is scrutinized through experimentation in artificial MRS signals interleaved with noise, regarding its signal fitting capabilities. Although extensive experiments with real world MRS signals are necessary, the herein shown performance illustrates the method's potential to be established as a generic MRS metabolites quantification procedure.
Directory of Open Access Journals (Sweden)
Weihua Jin
2013-01-01
Full Text Available This paper proposes a genetic-algorithms-based approach as an all-purpose problem-solving method for operation programming problems under uncertainty. The proposed method was applied for management of a municipal solid waste treatment system. Compared to the traditional interactive binary analysis, this approach has fewer limitations and is able to reduce the complexity in solving the inexact linear programming problems and inexact quadratic programming problems. The implementation of this approach was performed using the Genetic Algorithm Solver of MATLAB (trademark of MathWorks. The paper explains the genetic-algorithms-based method and presents details on the computation procedures for each type of inexact operation programming problems. A comparison of the results generated by the proposed method based on genetic algorithms with those produced by the traditional interactive binary analysis method is also presented.
Genetic Algorithms Evolve Optimized Transforms for Signal Processing Applications
National Research Council Canada - National Science Library
Moore, Frank; Babb, Brendan; Becke, Steven; Koyuk, Heather; Lamson, Earl, III; Wedge, Christopher
2005-01-01
.... The primary goal of the research described in this final report was to establish a methodology for using genetic algorithms to evolve coefficient sets describing inverse transforms and matched...
A Novel and Simple Spike Sorting Implementation.
Petrantonakis, Panagiotis C; Poirazi, Panayiota
2017-04-01
Monitoring the activity of multiple, individual neurons that fire spikes in the vicinity of an electrode, namely perform a Spike Sorting (SS) procedure, comprises one of the most important tools for contemporary neuroscience in order to reverse-engineer the brain. As recording electrodes' technology rabidly evolves by integrating thousands of electrodes in a confined spatial setting, the algorithms that are used to monitor individual neurons from recorded signals have to become even more reliable and computationally efficient. In this work, we propose a novel framework of the SS approach in which a single-step processing of the raw (unfiltered) extracellular signal is sufficient for both the detection and sorting of the activity of individual neurons. Despite its simplicity, the proposed approach exhibits comparable performance with state-of-the-art approaches, especially for spike detection in noisy signals, and paves the way for a new family of SS algorithms with the potential for multi-recording, fast, on-chip implementations.
APPLICATION OF GENETIC ALGORITHMS FOR ROBUST PARAMETER OPTIMIZATION
Directory of Open Access Journals (Sweden)
N. Belavendram
2010-12-01
Full Text Available Parameter optimization can be achieved by many methods such as Monte-Carlo, full, and fractional factorial designs. Genetic algorithms (GA are fairly recent in this respect but afford a novel method of parameter optimization. In GA, there is an initial pool of individuals each with its own specific phenotypic trait expressed as a ‘genetic chromosome’. Different genes enable individuals with different fitness levels to reproduce according to natural reproductive gene theory. This reproduction is established in terms of selection, crossover and mutation of reproducing genes. The resulting child generation of individuals has a better fitness level akin to natural selection, namely evolution. Populations evolve towards the fittest individuals. Such a mechanism has a parallel application in parameter optimization. Factors in a parameter design can be expressed as a genetic analogue in a pool of sub-optimal random solutions. Allowing this pool of sub-optimal solutions to evolve over several generations produces fitter generations converging to a pre-defined engineering optimum. In this paper, a genetic algorithm is used to study a seven factor non-linear equation for a Wheatstone bridge as the equation to be optimized. A comparison of the full factorial design against a GA method shows that the GA method is about 1200 times faster in finding a comparable solution.
Genetic Algorithms for Case Adaptation
Energy Technology Data Exchange (ETDEWEB)
Salem, A M [Computer Science Dept, Faculty of Computer and Information Sciences, Ain Shams University, Cairo (Egypt); Mohamed, A H [Solid State Dept., (NCRRT), Cairo (Egypt)
2008-07-01
Case based reasoning (CBR) paradigm has been widely used to provide computer support for recalling and adapting known cases to novel situations. Case adaptation algorithms generally rely on knowledge based and heuristics in order to change the past solutions to solve new problems. However, case adaptation has always been a difficult process to engineers within (CBR) cycle. Its difficulties can be referred to its domain dependency; and computational cost. In an effort to solve this problem, this research explores a general-purpose method that applying a genetic algorithm (GA) to CBR adaptation. Therefore, it can decrease the computational complexity of the search space in the problems having a great dependency on their domain knowledge. The proposed model can be used to perform a variety of design tasks on a broad set of application domains. However, it has been implemented for the tablet formulation as a domain of application. The proposed system has improved the performance of the CBR design systems.
Genetic Algorithms for Case Adaptation
International Nuclear Information System (INIS)
Salem, A.M.; Mohamed, A.H.
2008-01-01
Case based reasoning (CBR) paradigm has been widely used to provide computer support for recalling and adapting known cases to novel situations. Case adaptation algorithms generally rely on knowledge based and heuristics in order to change the past solutions to solve new problems. However, case adaptation has always been a difficult process to engineers within (CBR) cycle. Its difficulties can be referred to its domain dependency; and computational cost. In an effort to solve this problem, this research explores a general-purpose method that applying a genetic algorithm (GA) to CBR adaptation. Therefore, it can decrease the computational complexity of the search space in the problems having a great dependency on their domain knowledge. The proposed model can be used to perform a variety of design tasks on a broad set of application domains. However, it has been implemented for the tablet formulation as a domain of application. The proposed system has improved the performance of the CBR design systems
Stabilization of Electromagnetic Suspension System Behavior by Genetic Algorithm
Directory of Open Access Journals (Sweden)
Abbas Najar Khoda Bakhsh
2012-07-01
Full Text Available Electromagnetic suspension system with a nonlinear and unstable behavior, is used in maglev trains. In this paper a linear mathematical model of system is achieved and the state feedback method is used to improve the system stability. The control coefficients are tuned by two different methods, Riccati and a new method based on Genetic algorithm. In this new proposed method, we use Genetic algorithm to achieve the optimum values of control coefficients. The results of the system simulation by Matlab indicate the effectiveness of new proposed system. When a new reference of air gap is needed or a new external force is added, the proposed system could omit the vibration and shake of the train coupe and so, passengers feel more comfortable.
Knee point search using cascading top-k sorting with minimized time complexity.
Wang, Zheng; Tseng, Shian-Shyong
2013-01-01
Anomaly detection systems and many other applications are frequently confronted with the problem of finding the largest knee point in the sorted curve for a set of unsorted points. This paper proposes an efficient knee point search algorithm with minimized time complexity using the cascading top-k sorting when a priori probability distribution of the knee point is known. First, a top-k sort algorithm is proposed based on a quicksort variation. We divide the knee point search problem into multiple steps. And in each step an optimization problem of the selection number k is solved, where the objective function is defined as the expected time cost. Because the expected time cost in one step is dependent on that of the afterwards steps, we simplify the optimization problem by minimizing the maximum expected time cost. The posterior probability of the largest knee point distribution and the other parameters are updated before solving the optimization problem in each step. An example of source detection of DNS DoS flooding attacks is provided to illustrate the applications of the proposed algorithm.
Empirical study of self-configuring genetic programming algorithm performance and behaviour
International Nuclear Information System (INIS)
KrasnoyarskiyRabochiy prospect, Krasnoyarsk, 660014 (Russian Federation))" data-affiliation=" (Siberian State Aerospace University named after Academician M.F. Reshetnev 31 KrasnoyarskiyRabochiy prospect, Krasnoyarsk, 660014 (Russian Federation))" >Semenkin, E; KrasnoyarskiyRabochiy prospect, Krasnoyarsk, 660014 (Russian Federation))" data-affiliation=" (Siberian State Aerospace University named after Academician M.F. Reshetnev 31 KrasnoyarskiyRabochiy prospect, Krasnoyarsk, 660014 (Russian Federation))" >Semenkina, M
2015-01-01
The behaviour of the self-configuring genetic programming algorithm with a modified uniform crossover operator that implements a selective pressure on the recombination stage, is studied over symbolic programming problems. The operator's probabilistic rates interplay is studied and the role of operator variants on algorithm performance is investigated. Algorithm modifications based on the results of investigations are suggested. The performance improvement of the algorithm is demonstrated by the comparative analysis of suggested algorithms on the benchmark and real world problems
A new genetic algorithm for flexible job-shop scheduling problems
International Nuclear Information System (INIS)
Driss, Imen; Mouss, Kinza Nadia; Laggoun, Assia
2015-01-01
Flexible job-shop scheduling problem (FJSP), which is proved to be NP-hard, is an extension of the classical job-shop scheduling problem. In this paper, we propose a new genetic algorithm (NGA) to solve FJSP to minimize makespan. This new algorithm uses a new chromosome representation and adopts different strategies for crossover and mutation. The proposed algorithm is validated on a series of benchmark data sets and tested on data from a drug manufacturing company. Experimental results prove that the NGA is more efficient and competitive than some other existing algorithms.
A new genetic algorithm for flexible job-shop scheduling problems
Energy Technology Data Exchange (ETDEWEB)
Driss, Imen; Mouss, Kinza Nadia; Laggoun, Assia [University of Batna, Batna (Algeria)
2015-03-15
Flexible job-shop scheduling problem (FJSP), which is proved to be NP-hard, is an extension of the classical job-shop scheduling problem. In this paper, we propose a new genetic algorithm (NGA) to solve FJSP to minimize makespan. This new algorithm uses a new chromosome representation and adopts different strategies for crossover and mutation. The proposed algorithm is validated on a series of benchmark data sets and tested on data from a drug manufacturing company. Experimental results prove that the NGA is more efficient and competitive than some other existing algorithms.
Use of Genetic Algorithms for Contrast and Entropy Optimization in ISAR Autofocusing
Directory of Open Access Journals (Sweden)
Martorella Marco
2006-01-01
Full Text Available Image contrast maximization and entropy minimization are two commonly used techniques for ISAR image autofocusing. When the signal phase history due to the target radial motion has to be approximated with high order polynomial models, classic optimization techniques fail when attempting to either maximize the image contrast or minimize the image entropy. In this paper a solution of this problem is proposed by using genetic algorithms. The performances of the new algorithms that make use of genetic algorithms overcome the problem with previous implementations based on deterministic approaches. Tests on real data of airplanes and ships confirm the insight.
Dynamic modeling of genetic networks using genetic algorithm and S-system.
Kikuchi, Shinichi; Tominaga, Daisuke; Arita, Masanori; Takahashi, Katsutoshi; Tomita, Masaru
2003-03-22
The modeling of system dynamics of genetic networks, metabolic networks or signal transduction cascades from time-course data is formulated as a reverse-problem. Previous studies focused on the estimation of only network structures, and they were ineffective in inferring a network structure with feedback loops. We previously proposed a method to predict not only the network structure but also its dynamics using a Genetic Algorithm (GA) and an S-system formalism. However, it could predict only a small number of parameters and could rarely obtain essential structures. In this work, we propose a unified extension of the basic method. Notable improvements are as follows: (1) an additional term in its evaluation function that aims at eliminating futile parameters; (2) a crossover method called Simplex Crossover (SPX) to improve its optimization ability; and (3) a gradual optimization strategy to increase the number of predictable parameters. The proposed method is implemented as a C program called PEACE1 (Predictor by Evolutionary Algorithms and Canonical Equations 1). Its performance was compared with the basic method. The comparison showed that: (1) the convergence rate increased about 5-fold; (2) the optimization speed was raised about 1.5-fold; and (3) the number of predictable parameters was increased about 5-fold. Moreover, we successfully inferred the dynamics of a small genetic network constructed with 60 parameters for 5 network variables and feedback loops using only time-course data of gene expression.
MAC Protocol for Ad Hoc Networks Using a Genetic Algorithm
Elizarraras, Omar; Panduro, Marco; Méndez, Aldo L.
2014-01-01
The problem of obtaining the transmission rate in an ad hoc network consists in adjusting the power of each node to ensure the signal to interference ratio (SIR) and the energy required to transmit from one node to another is obtained at the same time. Therefore, an optimal transmission rate for each node in a medium access control (MAC) protocol based on CSMA-CDMA (carrier sense multiple access-code division multiple access) for ad hoc networks can be obtained using evolutionary optimization. This work proposes a genetic algorithm for the transmission rate election considering a perfect power control, and our proposition achieves improvement of 10% compared with the scheme that handles the handshaking phase to adjust the transmission rate. Furthermore, this paper proposes a genetic algorithm that solves the problem of power combining, interference, data rate, and energy ensuring the signal to interference ratio in an ad hoc network. The result of the proposed genetic algorithm has a better performance (15%) compared to the CSMA-CDMA protocol without optimizing. Therefore, we show by simulation the effectiveness of the proposed protocol in terms of the throughput. PMID:25140339
MAC Protocol for Ad Hoc Networks Using a Genetic Algorithm
Directory of Open Access Journals (Sweden)
Omar Elizarraras
2014-01-01
Full Text Available The problem of obtaining the transmission rate in an ad hoc network consists in adjusting the power of each node to ensure the signal to interference ratio (SIR and the energy required to transmit from one node to another is obtained at the same time. Therefore, an optimal transmission rate for each node in a medium access control (MAC protocol based on CSMA-CDMA (carrier sense multiple access-code division multiple access for ad hoc networks can be obtained using evolutionary optimization. This work proposes a genetic algorithm for the transmission rate election considering a perfect power control, and our proposition achieves improvement of 10% compared with the scheme that handles the handshaking phase to adjust the transmission rate. Furthermore, this paper proposes a genetic algorithm that solves the problem of power combining, interference, data rate, and energy ensuring the signal to interference ratio in an ad hoc network. The result of the proposed genetic algorithm has a better performance (15% compared to the CSMA-CDMA protocol without optimizing. Therefore, we show by simulation the effectiveness of the proposed protocol in terms of the throughput.
Jonathan B. Berk
1998-01-01
In this paper we analyze the theoretical implications of sorting data into groups and then running asset pricing tests within each group. We show that the way this procedure is implemented introduces a severe bias in favor of rejecting the model under consideration. By simply picking enough groups to sort into even the true asset pricing model can be shown to have no explanatory power within each group.
A Swarm Optimization Genetic Algorithm Based on Quantum-Behaved Particle Swarm Optimization.
Sun, Tao; Xu, Ming-Hai
2017-01-01
Quantum-behaved particle swarm optimization (QPSO) algorithm is a variant of the traditional particle swarm optimization (PSO). The QPSO that was originally developed for continuous search spaces outperforms the traditional PSO in search ability. This paper analyzes the main factors that impact the search ability of QPSO and converts the particle movement formula to the mutation condition by introducing the rejection region, thus proposing a new binary algorithm, named swarm optimization genetic algorithm (SOGA), because it is more like genetic algorithm (GA) than PSO in form. SOGA has crossover and mutation operator as GA but does not need to set the crossover and mutation probability, so it has fewer parameters to control. The proposed algorithm was tested with several nonlinear high-dimension functions in the binary search space, and the results were compared with those from BPSO, BQPSO, and GA. The experimental results show that SOGA is distinctly superior to the other three algorithms in terms of solution accuracy and convergence.
Naturally selecting solutions: the use of genetic algorithms in bioinformatics.
Manning, Timmy; Sleator, Roy D; Walsh, Paul
2013-01-01
For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to scheduling optimization. Paradoxically, as we move deeper into the post-genomics era, the reverse is occurring, as biologists and bioinformaticians look to computational techniques, to solve a variety of biological problems. One of the most common biologically inspired techniques are genetic algorithms (GAs), which take the Darwinian concept of natural selection as the driving force behind systems for solving real world problems, including those in the bioinformatics domain. Herein, we provide an overview of genetic algorithms and survey some of the most recent applications of this approach to bioinformatics based problems.
Particle swarm optimization - Genetic algorithm (PSOGA) on linear transportation problem
Rahmalia, Dinita
2017-08-01
Linear Transportation Problem (LTP) is the case of constrained optimization where we want to minimize cost subject to the balance of the number of supply and the number of demand. The exact method such as northwest corner, vogel, russel, minimal cost have been applied at approaching optimal solution. In this paper, we use heurisitic like Particle Swarm Optimization (PSO) for solving linear transportation problem at any size of decision variable. In addition, we combine mutation operator of Genetic Algorithm (GA) at PSO to improve optimal solution. This method is called Particle Swarm Optimization - Genetic Algorithm (PSOGA). The simulations show that PSOGA can improve optimal solution resulted by PSO.
Parallel Genetic Algorithms for calibrating Cellular Automata models: Application to lava flows
International Nuclear Information System (INIS)
D'Ambrosio, D.; Spataro, W.; Di Gregorio, S.; Calabria Univ., Cosenza; Crisci, G.M.; Rongo, R.; Calabria Univ., Cosenza
2005-01-01
Cellular Automata are highly nonlinear dynamical systems which are suitable far simulating natural phenomena whose behaviour may be specified in terms of local interactions. The Cellular Automata model SCIARA, developed far the simulation of lava flows, demonstrated to be able to reproduce the behaviour of Etnean events. However, in order to apply the model far the prediction of future scenarios, a thorough calibrating phase is required. This work presents the application of Genetic Algorithms, general-purpose search algorithms inspired to natural selection and genetics, far the parameters optimisation of the model SCIARA. Difficulties due to the elevated computational time suggested the adoption a Master-Slave Parallel Genetic Algorithm far the calibration of the model with respect to the 2001 Mt. Etna eruption. Results demonstrated the usefulness of the approach, both in terms of computing time and quality of performed simulations
Reactive power and voltage control based on general quantum genetic algorithms
DEFF Research Database (Denmark)
Vlachogiannis, Ioannis (John); Østergaard, Jacob
2009-01-01
This paper presents an improved evolutionary algorithm based on quantum computing for optima l steady-state performance of power systems. However, the proposed general quantum genetic algorithm (GQ-GA) can be applied in various combinatorial optimization problems. In this study the GQ-GA determines...... techniques such as enhanced GA, multi-objective evolutionary algorithm and particle swarm optimization algorithms, as well as the classical primal-dual interior-point optimal power flow algorithm. The comparison demonstrates the ability of the GQ-GA in reaching more optimal solutions....
International Nuclear Information System (INIS)
Navid, Ali; Khalilarya, Shahram; Taghavifar, Hadi
2016-01-01
Highlights: • NLPQL algorithm with Latin hypercube and multi-objective GA were applied on engine. • NLPQL converge to the best solution at RunID41, MOGA introduces at RunID84. • Deeper, more encircled design gives the lowest NOx, greater radius and deeper bowl the highest IMEP. • The maximum IMEP and minimum ISFC obtained with NLPQL, the lowest NOx with MOGA. - Abstract: This study is concerned with the application of two major kinds of optimization algorithms on the baseline diesel engine in the class of evolutionary and non-evolutionary algorithms. The multi-objective genetic algorithm and non-linear programming by quadratic Lagrangian (NLPQL) method have completely different functions in optimizing and finding the global optimal design. The design variables are injection angle, half spray cone angle, inner distance of the bowl wall, and the bowl radius, while the objectives include NOx emission, spray droplet diameter, indicated mean effective pressure (IMEP), and indicated specific fuel consumption (ISFC). The restrictions were set on the objectives to distinguish between feasible designs and infeasible designs to sort those cases that cannot fulfill the demands of diesel engine designers and emission control measures. It is found that a design with deeper bowl and more encircled shape (higher swirl motion) is more suitable for NO_x emission control, whereas designs with a bigger bowl radius, and closer inner wall distance of the bowl (Di) may lead to higher engine efficiency indices. Moreover, it was revealed that the NLPQL could rapidly search for the best design at Run ID 41 compared to genetic algorithm, which is able to find the global optima at last runs (ID 84). Both techniques introduce almost the same geometrical shape of the combustion chamber with a negligible contrast in the injection system.
Influence of retrospective sorting on image quality in respiratory correlated computed tomography
International Nuclear Information System (INIS)
Guckenberger, Matthias; Weininger, Markus; Wilbert, Juergen; Richter, Anne; Baier, Kurt; Krieger, Thomas; Polat, Buelent; Flentje, Michael
2007-01-01
Purpose: To evaluate the influence of retrospective sorting on image quality in four-dimensional respiratory correlated CT. Materials and methods: Twelve patients with intrapulmonary tumors were examined using a 24-slice CT-scanner in helical mode. Images were reconstructed after retrospective sorting based on five algorithms: amplitude-based sorting with definition of peak-exhalation and peak-inhalation separately/locally for all breathing cycles (LAS) and globally for the time of image acquisition (GAS). Drifts of the breathing signal were corrected in dc-GAS. In phase-based (PS) and cycle-based (CS) algorithm the projections were sorted relative to time. Motion artifacts were scored by a radiologist. The tumor volumes were measured using automatic image segmentation. Results: Averaged over all breathing phases, LAS and PS achieved significantly improved image quality and lowest tumor volume variability compared to GAS, dc-GAS and CS. Imaging redundancy of 5 s was not sufficient for GAS and dc-GAS: missing corresponding amplitude positions in one or several breathing cycles resulted in incomplete reconstruction of peak-ventilation images in 11/12 and 10/12 patients with GAS and dc-GAS, respectively. Limiting the analysis to mid-ventilation phases showed GAS and dc-GAS as the most reliable algorithms. Conclusions: LAS and PS are suggested as a compromise between image quality and radiation dose
A controlled genetic algorithm by fuzzy logic and belief functions for job-shop scheduling.
Hajri, S; Liouane, N; Hammadi, S; Borne, P
2000-01-01
Most scheduling problems are highly complex combinatorial problems. However, stochastic methods such as genetic algorithm yield good solutions. In this paper, we present a controlled genetic algorithm (CGA) based on fuzzy logic and belief functions to solve job-shop scheduling problems. For better performance, we propose an efficient representational scheme, heuristic rules for creating the initial population, and a new methodology for mixing and computing genetic operator probabilities.
Use of genetic algorithms for high hydrostatic pressure inactivation ...
African Journals Online (AJOL)
) for high hydrostatic pressure (HHP) inactivation of Bacillus cereus spores, Bacillus subtilis spores and cells, Staphylococcus aureus and Listeria monocytogenes, all in milk buffer, were used to demonstrate the utility of genetic algorithms ...
Parallel genetic algorithms with migration for the hybrid flow shop scheduling problem
Directory of Open Access Journals (Sweden)
K. Belkadi
2006-01-01
Full Text Available This paper addresses scheduling problems in hybrid flow shop-like systems with a migration parallel genetic algorithm (PGA_MIG. This parallel genetic algorithm model allows genetic diversity by the application of selection and reproduction mechanisms nearer to nature. The space structure of the population is modified by dividing it into disjoined subpopulations. From time to time, individuals are exchanged between the different subpopulations (migration. Influence of parameters and dedicated strategies are studied. These parameters are the number of independent subpopulations, the interconnection topology between subpopulations, the choice/replacement strategy of the migrant individuals, and the migration frequency. A comparison between the sequential and parallel version of genetic algorithm (GA is provided. This comparison relates to the quality of the solution and the execution time of the two versions. The efficiency of the parallel model highly depends on the parameters and especially on the migration frequency. In the same way this parallel model gives a significant improvement of computational time if it is implemented on a parallel architecture which offers an acceptable number of processors (as many processors as subpopulations.
Pavement maintenance scheduling using genetic algorithms
Yang, Chao; Remenyte-Prescott, Rasa; Andrews, John D.
2015-01-01
This paper presents a new pavement management system (PMS) to achieve the optimal pavement maintenance and rehabilitation (M&R) strategy for a highway network using genetic algorithms (GAs). Optimal M&R strategy is a set of pavement activities that both minimise the maintenance cost of a highway network and maximise the pavement condition of the road sections on the network during a certain planning period. NSGA-II, a multi-objective GA, is employed to perform pavement maintenance optimisatio...
Efficient Architecture for Spike Sorting in Reconfigurable Hardware
Hwang, Wen-Jyi; Lee, Wei-Hao; Lin, Shiow-Jyu; Lai, Sheng-Ying
2013-01-01
This paper presents a novel hardware architecture for fast spike sorting. The architecture is able to perform both the feature extraction and clustering in hardware. The generalized Hebbian algorithm (GHA) and fuzzy C-means (FCM) algorithm are used for feature extraction and clustering, respectively. The employment of GHA allows efficient computation of principal components for subsequent clustering operations. The FCM is able to achieve near optimal clustering for spike sorting. Its performance is insensitive to the selection of initial cluster centers. The hardware implementations of GHA and FCM feature low area costs and high throughput. In the GHA architecture, the computation of different weight vectors share the same circuit for lowering the area costs. Moreover, in the FCM hardware implementation, the usual iterative operations for updating the membership matrix and cluster centroid are merged into one single updating process to evade the large storage requirement. To show the effectiveness of the circuit, the proposed architecture is physically implemented by field programmable gate array (FPGA). It is embedded in a System-on-Chip (SOC) platform for performance measurement. Experimental results show that the proposed architecture is an efficient spike sorting design for attaining high classification correct rate and high speed computation. PMID:24189331
Efficient Architecture for Spike Sorting in Reconfigurable Hardware
Directory of Open Access Journals (Sweden)
Sheng-Ying Lai
2013-11-01
Full Text Available This paper presents a novel hardware architecture for fast spike sorting. The architecture is able to perform both the feature extraction and clustering in hardware. The generalized Hebbian algorithm (GHA and fuzzy C-means (FCM algorithm are used for feature extraction and clustering, respectively. The employment of GHA allows efficient computation of principal components for subsequent clustering operations. The FCM is able to achieve near optimal clustering for spike sorting. Its performance is insensitive to the selection of initial cluster centers. The hardware implementations of GHA and FCM feature low area costs and high throughput. In the GHA architecture, the computation of different weight vectors share the same circuit for lowering the area costs. Moreover, in the FCM hardware implementation, the usual iterative operations for updating the membership matrix and cluster centroid are merged into one single updating process to evade the large storage requirement. To show the effectiveness of the circuit, the proposed architecture is physically implemented by field programmable gate array (FPGA. It is embedded in a System-on-Chip (SOC platform for performance measurement. Experimental results show that the proposed architecture is an efficient spike sorting design for attaining high classification correct rate and high speed computation.
Exergetic optimization of turbofan engine with genetic algorithm method
Energy Technology Data Exchange (ETDEWEB)
Turan, Onder [Anadolu University, School of Civil Aviation (Turkey)], e-mail: onderturan@anadolu.edu.tr
2011-07-01
With the growth of passenger numbers, emissions from the aeronautics sector are increasing and the industry is now working on improving engine efficiency to reduce fuel consumption. The aim of this study is to present the use of genetic algorithms, an optimization method based on biological principles, to optimize the exergetic performance of turbofan engines. The optimization was carried out using exergy efficiency, overall efficiency and specific thrust of the engine as evaluation criteria and playing on pressure and bypass ratio, turbine inlet temperature and flight altitude. Results showed exergy efficiency can be maximized with higher altitudes, fan pressure ratio and turbine inlet temperature; the turbine inlet temperature is the most important parameter for increased exergy efficiency. This study demonstrated that genetic algorithms are effective in optimizing complex systems in a short time.
A Novel Real-coded Quantum-inspired Genetic Algorithm and Its Application in Data Reconciliation
Directory of Open Access Journals (Sweden)
Gao Lin
2012-06-01
Full Text Available Traditional quantum-inspired genetic algorithm (QGA has drawbacks such as premature convergence, heavy computational cost, complicated coding and decoding process etc. In this paper, a novel real-coded quantum-inspired genetic algorithm is proposed based on interval division thinking. Detailed comparisons with some similar approaches for some standard benchmark functions test validity of the proposed algorithm. Besides, the proposed algorithm is used in two typical nonlinear data reconciliation problems (distilling process and extraction process and simulation results show its efficiency in nonlinear data reconciliation problems.
An Agent-Based Framework for E-Commerce Information Retrieval Management Using Genetic Algorithms
Directory of Open Access Journals (Sweden)
Floarea NASTASE
2009-01-01
Full Text Available The paper addresses the issue of improving retrieval performance management for retrieval from document collections that exist on the Internet. It also comes with a solution that uses the benefits of the agent technology and genetic algorithms in the process of the information retrieving management. The most important paradigms of information retrieval are mentioned having the goal to make more evident the advantages of using the genetic algorithms based one. Within the paper, also a genetic algorithm that can be use for the proposed solution is detailed and a comparative description between the dynamic and static proposed solution is made. In the end, new future directions are shown based on elements presented in this paper. The future results look very encouraging.
An improved genetic algorithm with dynamic topology
International Nuclear Information System (INIS)
Cai Kai-Quan; Tang Yan-Wu; Zhang Xue-Jun; Guan Xiang-Min
2016-01-01
The genetic algorithm (GA) is a nature-inspired evolutionary algorithm to find optima in search space via the interaction of individuals. Recently, researchers demonstrated that the interaction topology plays an important role in information exchange among individuals of evolutionary algorithm. In this paper, we investigate the effect of different network topologies adopted to represent the interaction structures. It is found that GA with a high-density topology ends up more likely with an unsatisfactory solution, contrarily, a low-density topology can impede convergence. Consequently, we propose an improved GA with dynamic topology, named DT-GA, in which the topology structure varies dynamically along with the fitness evolution. Several experiments executed with 15 well-known test functions have illustrated that DT-GA outperforms other test GAs for making a balance of convergence speed and optimum quality. Our work may have implications in the combination of complex networks and computational intelligence. (paper)
International Nuclear Information System (INIS)
Tolabi, H.B.; Ayob, S.M.
2014-01-01
In this paper, a novel approach based on simulated annealing algorithm as a meta-heuristic method is implemented in MATLAB software to estimate the monthly average daily global solar radiation on a horizontal surface for six different climate cities of Iran. A search method based on genetic algorithm is applied to accelerate problem solving. Results show that simulated annealing based on genetic algorithm search is a suitable method to find the global solar radiation. (author)
An Evaluation of the Critical Factors Affecting the Efficiency of Some Sorting Techniques
Olabiyisi S.O.; Adetunji A.B.; Oyeyinka F.I.
2013-01-01
Sorting allows information or data to be put into a meaningful order. As efficiency is a major concern of computing, data are sorted in order to gain the efficiency in retrieving or searching tasks. The factors affecting the efficiency of shell, Heap, Bubble, Quick and Merge sorting techniques in terms of running time, memory usage and the number of exchanges were investigated. Experiment was conducted for the decision variables generated from algorithms implemented in Java programming and fa...
Proposed genetic algorithms for construction site lay out
Mawdesley, Michael J.; Al-Jibouri, Saad H.S.
2003-01-01
The positioning of temporary facilities on a construction site is an area of research which has been recognised as important but which has received relatively little attention. In this paper, a genetic algorithm is proposed to solve the problem in which m facilities are to be positioned to n
Hybrid Genetic Algorithm with Multiparents Crossover for Job Shop Scheduling Problems
Directory of Open Access Journals (Sweden)
Noor Hasnah Moin
2015-01-01
Full Text Available The job shop scheduling problem (JSSP is one of the well-known hard combinatorial scheduling problems. This paper proposes a hybrid genetic algorithm with multiparents crossover for JSSP. The multiparents crossover operator known as extended precedence preservative crossover (EPPX is able to recombine more than two parents to generate a single new offspring distinguished from common crossover operators that recombine only two parents. This algorithm also embeds a schedule generation procedure to generate full-active schedule that satisfies precedence constraints in order to reduce the search space. Once a schedule is obtained, a neighborhood search is applied to exploit the search space for better solutions and to enhance the GA. This hybrid genetic algorithm is simulated on a set of benchmarks from the literatures and the results are compared with other approaches to ensure the sustainability of this algorithm in solving JSSP. The results suggest that the implementation of multiparents crossover produces competitive results.
Instrument design and optimization using genetic algorithms
International Nuclear Information System (INIS)
Hoelzel, Robert; Bentley, Phillip M.; Fouquet, Peter
2006-01-01
This article describes the design of highly complex physical instruments by using a canonical genetic algorithm (GA). The procedure can be applied to all instrument designs where performance goals can be quantified. It is particularly suited to the optimization of instrument design where local optima in the performance figure of merit are prevalent. Here, a GA is used to evolve the design of the neutron spin-echo spectrometer WASP which is presently being constructed at the Institut Laue-Langevin, Grenoble, France. A comparison is made between this artificial intelligence approach and the traditional manual design methods. We demonstrate that the search of parameter space is more efficient when applying the genetic algorithm, and the GA produces a significantly better instrument design. Furthermore, it is found that the GA increases flexibility, by facilitating the reoptimization of the design after changes in boundary conditions during the design phase. The GA also allows the exploration of 'nonstandard' magnet coil geometries. We conclude that this technique constitutes a powerful complementary tool for the design and optimization of complex scientific apparatus, without replacing the careful thought processes employed in traditional design methods
Instrument design and optimization using genetic algorithms
Hölzel, Robert; Bentley, Phillip M.; Fouquet, Peter
2006-10-01
This article describes the design of highly complex physical instruments by using a canonical genetic algorithm (GA). The procedure can be applied to all instrument designs where performance goals can be quantified. It is particularly suited to the optimization of instrument design where local optima in the performance figure of merit are prevalent. Here, a GA is used to evolve the design of the neutron spin-echo spectrometer WASP which is presently being constructed at the Institut Laue-Langevin, Grenoble, France. A comparison is made between this artificial intelligence approach and the traditional manual design methods. We demonstrate that the search of parameter space is more efficient when applying the genetic algorithm, and the GA produces a significantly better instrument design. Furthermore, it is found that the GA increases flexibility, by facilitating the reoptimization of the design after changes in boundary conditions during the design phase. The GA also allows the exploration of "nonstandard" magnet coil geometries. We conclude that this technique constitutes a powerful complementary tool for the design and optimization of complex scientific apparatus, without replacing the careful thought processes employed in traditional design methods.
Improvement of ECM Techniques through Implementation of a Genetic Algorithm
National Research Council Canada - National Science Library
Townsend, James D
2008-01-01
This research effort develops the necessary interfaces between the radar signal processing components and an optimization routine, such as genetic algorithms, to develop Electronic Countermeasure (ECM...
Grouping genetic algorithms advances and applications
Mutingi, Michael
2017-01-01
This book presents advances and innovations in grouping genetic algorithms, enriched with new and unique heuristic optimization techniques. These algorithms are specially designed for solving industrial grouping problems where system entities are to be partitioned or clustered into efficient groups according to a set of guiding decision criteria. Examples of such problems are: vehicle routing problems, team formation problems, timetabling problems, assembly line balancing, group maintenance planning, modular design, and task assignment. A wide range of industrial grouping problems, drawn from diverse fields such as logistics, supply chain management, project management, manufacturing systems, engineering design and healthcare, are presented. Typical complex industrial grouping problems, with multiple decision criteria and constraints, are clearly described using illustrative diagrams and formulations. The problems are mapped into a common group structure that can conveniently be used as an input scheme to spe...
Constructing Efficient Dictionaries in Close to Sorting Time
DEFF Research Database (Denmark)
Ruzic, Milan
2008-01-01
to be a particularly challenging task. We present solutions to the static dictionary problem that significantly improve the previously known upper bounds and bring them close to obvious lower bounds. Our dictionaries have a constant lookup cost and use linear space, which was known to be possible, but the worst......-case cost of construction of the structures is proportional to only loglogn times the cost of sorting the input. Our claimed performance bounds are obtained in the word RAM model and in the external memory models; only the involved sorting procedures in the algorithms need to be changed between the models....
Hitting times of local and global optima in genetic algorithms with very high selection pressure
Directory of Open Access Journals (Sweden)
Eremeev Anton V.
2017-01-01
Full Text Available The paper is devoted to upper bounds on the expected first hitting times of the sets of local or global optima for non-elitist genetic algorithms with very high selection pressure. The results of this paper extend the range of situations where the upper bounds on the expected runtime are known for genetic algorithms and apply, in particular, to the Canonical Genetic Algorithm. The obtained bounds do not require the probability of fitness-decreasing mutation to be bounded by a constant which is less than one.
Contact-impact algorithms on parallel computers
International Nuclear Information System (INIS)
Zhong Zhihua; Nilsson, Larsgunnar
1994-01-01
Contact-impact algorithms on parallel computers are discussed within the context of explicit finite element analysis. The algorithms concerned include a contact searching algorithm and an algorithm for contact force calculations. The contact searching algorithm is based on the territory concept of the general HITA algorithm. However, no distinction is made between different contact bodies, or between different contact surfaces. All contact segments from contact boundaries are taken as a single set. Hierarchy territories and contact territories are expanded. A three-dimensional bucket sort algorithm is used to sort contact nodes. The defence node algorithm is used in the calculation of contact forces. Both the contact searching algorithm and the defence node algorithm are implemented on the connection machine CM-200. The performance of the algorithms is examined under different circumstances, and numerical results are presented. ((orig.))
Genetic Algorithm Design of a 3D Printed Heat Sink
Energy Technology Data Exchange (ETDEWEB)
Wu, Tong [ORNL; Ozpineci, Burak [ORNL; Ayers, Curtis William [ORNL
2016-01-01
In this paper, a genetic algorithm- (GA-) based approach is discussed for designing heat sinks based on total heat generation and dissipation for a pre-specified size andshape. This approach combines random iteration processesand genetic algorithms with finite element analysis (FEA) to design the optimized heat sink. With an approach that prefers survival of the fittest , a more powerful heat sink can bedesigned which can cool power electronics more efficiently. Some of the resulting designs can only be 3D printed due totheir complexity. In addition to describing the methodology, this paper also includes comparisons of different cases to evaluate the performance of the newly designed heat sinkcompared to commercially available heat sinks.
A modified genetic algorithm with fuzzy roulette wheel selection for job-shop scheduling problems
Thammano, Arit; Teekeng, Wannaporn
2015-05-01
The job-shop scheduling problem is one of the most difficult production planning problems. Since it is in the NP-hard class, a recent trend in solving the job-shop scheduling problem is shifting towards the use of heuristic and metaheuristic algorithms. This paper proposes a novel metaheuristic algorithm, which is a modification of the genetic algorithm. This proposed algorithm introduces two new concepts to the standard genetic algorithm: (1) fuzzy roulette wheel selection and (2) the mutation operation with tabu list. The proposed algorithm has been evaluated and compared with several state-of-the-art algorithms in the literature. The experimental results on 53 JSSPs show that the proposed algorithm is very effective in solving the combinatorial optimization problems. It outperforms all state-of-the-art algorithms on all benchmark problems in terms of the ability to achieve the optimal solution and the computational time.
Real Time Optima Tracking Using Harvesting Models of the Genetic Algorithm
Baskaran, Subbiah; Noever, D.
1999-01-01
Tracking optima in real time propulsion control, particularly for non-stationary optimization problems is a challenging task. Several approaches have been put forward for such a study including the numerical method called the genetic algorithm. In brief, this approach is built upon Darwinian-style competition between numerical alternatives displayed in the form of binary strings, or by analogy to 'pseudogenes'. Breeding of improved solution is an often cited parallel to natural selection in.evolutionary or soft computing. In this report we present our results of applying a novel model of a genetic algorithm for tracking optima in propulsion engineering and in real time control. We specialize the algorithm to mission profiling and planning optimizations, both to select reduced propulsion needs through trajectory planning and to explore time or fuel conservation strategies.
Genetic algorithm to solve the problems of lectures and practicums scheduling
Syahputra, M. F.; Apriani, R.; Sawaluddin; Abdullah, D.; Albra, W.; Heikal, M.; Abdurrahman, A.; Khaddafi, M.
2018-02-01
Generally, the scheduling process is done manually. However, this method has a low accuracy level, along with possibilities that a scheduled process collides with another scheduled process. When doing theory class and practicum timetable scheduling process, there are numerous problems, such as lecturer teaching schedule collision, schedule collision with another schedule, practicum lesson schedules that collides with theory class, and the number of classrooms available. In this research, genetic algorithm is implemented to perform theory class and practicum timetable scheduling process. The algorithm will be used to process the data containing lists of lecturers, courses, and class rooms, obtained from information technology department at University of Sumatera Utara. The result of scheduling process using genetic algorithm is the most optimal timetable that conforms to available time slots, class rooms, courses, and lecturer schedules.
An efficient genetic algorithm for maximum coverage deployment in wireless sensor networks.
Yoon, Yourim; Kim, Yong-Hyuk
2013-10-01
Sensor networks have a lot of applications such as battlefield surveillance, environmental monitoring, and industrial diagnostics. Coverage is one of the most important performance metrics for sensor networks since it reflects how well a sensor field is monitored. In this paper, we introduce the maximum coverage deployment problem in wireless sensor networks and analyze the properties of the problem and its solution space. Random deployment is the simplest way to deploy sensor nodes but may cause unbalanced deployment and therefore, we need a more intelligent way for sensor deployment. We found that the phenotype space of the problem is a quotient space of the genotype space in a mathematical view. Based on this property, we propose an efficient genetic algorithm using a novel normalization method. A Monte Carlo method is adopted to design an efficient evaluation function, and its computation time is decreased without loss of solution quality using a method that starts from a small number of random samples and gradually increases the number for subsequent generations. The proposed genetic algorithms could be further improved by combining with a well-designed local search. The performance of the proposed genetic algorithm is shown by a comparative experimental study. When compared with random deployment and existing methods, our genetic algorithm was not only about twice faster, but also showed significant performance improvement in quality.
A test sheet generating algorithm based on intelligent genetic algorithm and hierarchical planning
Gu, Peipei; Niu, Zhendong; Chen, Xuting; Chen, Wei
2013-03-01
In recent years, computer-based testing has become an effective method to evaluate students' overall learning progress so that appropriate guiding strategies can be recommended. Research has been done to develop intelligent test assembling systems which can automatically generate test sheets based on given parameters of test items. A good multisubject test sheet depends on not only the quality of the test items but also the construction of the sheet. Effective and efficient construction of test sheets according to multiple subjects and criteria is a challenging problem. In this paper, a multi-subject test sheet generation problem is formulated and a test sheet generating approach based on intelligent genetic algorithm and hierarchical planning (GAHP) is proposed to tackle this problem. The proposed approach utilizes hierarchical planning to simplify the multi-subject testing problem and adopts genetic algorithm to process the layered criteria, enabling the construction of good test sheets according to multiple test item requirements. Experiments are conducted and the results show that the proposed approach is capable of effectively generating multi-subject test sheets that meet specified requirements and achieve good performance.
Public Transport Route Finding using a Hybrid Genetic Algorithm
Liviu Adrian COTFAS; Andreea DIOSTEANU
2011-01-01
In this paper we present a public transport route finding solution based on a hybrid genetic algorithm. The algorithm uses two heuristics that take into consideration the number of trans-fers and the remaining distance to the destination station in order to improve the convergence speed. The interface of the system uses the latest web technologies to offer both portability and advanced functionality. The approach has been evaluated using the data for the Bucharest public transport network.
Genetic algorithm parameters tuning for resource-constrained project scheduling problem
Tian, Xingke; Yuan, Shengrui
2018-04-01
Project Scheduling Problem (RCPSP) is a kind of important scheduling problem. To achieve a certain optimal goal such as the shortest duration, the smallest cost, the resource balance and so on, it is required to arrange the start and finish of all tasks under the condition of satisfying project timing constraints and resource constraints. In theory, the problem belongs to the NP-hard problem, and the model is abundant. Many combinatorial optimization problems are special cases of RCPSP, such as job shop scheduling, flow shop scheduling and so on. At present, the genetic algorithm (GA) has been used to deal with the classical RCPSP problem and achieved remarkable results. Vast scholars have also studied the improved genetic algorithm for the RCPSP problem, which makes it to solve the RCPSP problem more efficiently and accurately. However, for the selection of the main parameters of the genetic algorithm, there is no parameter optimization in these studies. Generally, we used the empirical method, but it cannot ensure to meet the optimal parameters. In this paper, the problem was carried out, which is the blind selection of parameters in the process of solving the RCPSP problem. We made sampling analysis, the establishment of proxy model and ultimately solved the optimal parameters.
A novel structure-aware sparse learning algorithm for brain imaging genetics.
Du, Lei; Jingwen, Yan; Kim, Sungeun; Risacher, Shannon L; Huang, Heng; Inlow, Mark; Moore, Jason H; Saykin, Andrew J; Shen, Li
2014-01-01
Brain imaging genetics is an emergent research field where the association between genetic variations such as single nucleotide polymorphisms (SNPs) and neuroimaging quantitative traits (QTs) is evaluated. Sparse canonical correlation analysis (SCCA) is a bi-multivariate analysis method that has the potential to reveal complex multi-SNP-multi-QT associations. Most existing SCCA algorithms are designed using the soft threshold strategy, which assumes that the features in the data are independent from each other. This independence assumption usually does not hold in imaging genetic data, and thus inevitably limits the capability of yielding optimal solutions. We propose a novel structure-aware SCCA (denoted as S2CCA) algorithm to not only eliminate the independence assumption for the input data, but also incorporate group-like structure in the model. Empirical comparison with a widely used SCCA implementation, on both simulated and real imaging genetic data, demonstrated that S2CCA could yield improved prediction performance and biologically meaningful findings.
Digital Image Encryption Algorithm Design Based on Genetic Hyperchaos
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Jian Wang
2016-01-01
Full Text Available In view of the present chaotic image encryption algorithm based on scrambling (diffusion is vulnerable to choosing plaintext (ciphertext attack in the process of pixel position scrambling, we put forward a image encryption algorithm based on genetic super chaotic system. The algorithm, by introducing clear feedback to the process of scrambling, makes the scrambling effect related to the initial chaos sequence and the clear text itself; it has realized the image features and the organic fusion of encryption algorithm. By introduction in the process of diffusion to encrypt plaintext feedback mechanism, it improves sensitivity of plaintext, algorithm selection plaintext, and ciphertext attack resistance. At the same time, it also makes full use of the characteristics of image information. Finally, experimental simulation and theoretical analysis show that our proposed algorithm can not only effectively resist plaintext (ciphertext attack, statistical attack, and information entropy attack but also effectively improve the efficiency of image encryption, which is a relatively secure and effective way of image communication.
Segment-based dose optimization using a genetic algorithm
International Nuclear Information System (INIS)
Cotrutz, Cristian; Xing Lei
2003-01-01
Intensity modulated radiation therapy (IMRT) inverse planning is conventionally done in two steps. Firstly, the intensity maps of the treatment beams are optimized using a dose optimization algorithm. Each of them is then decomposed into a number of segments using a leaf-sequencing algorithm for delivery. An alternative approach is to pre-assign a fixed number of field apertures and optimize directly the shapes and weights of the apertures. While the latter approach has the advantage of eliminating the leaf-sequencing step, the optimization of aperture shapes is less straightforward than that of beamlet-based optimization because of the complex dependence of the dose on the field shapes, and their weights. In this work we report a genetic algorithm for segment-based optimization. Different from a gradient iterative approach or simulated annealing, the algorithm finds the optimum solution from a population of candidate plans. In this technique, each solution is encoded using three chromosomes: one for the position of the left-bank leaves of each segment, the second for the position of the right-bank and the third for the weights of the segments defined by the first two chromosomes. The convergence towards the optimum is realized by crossover and mutation operators that ensure proper exchange of information between the three chromosomes of all the solutions in the population. The algorithm is applied to a phantom and a prostate case and the results are compared with those obtained using beamlet-based optimization. The main conclusion drawn from this study is that the genetic optimization of segment shapes and weights can produce highly conformal dose distribution. In addition, our study also confirms previous findings that fewer segments are generally needed to generate plans that are comparable with the plans obtained using beamlet-based optimization. Thus the technique may have useful applications in facilitating IMRT treatment planning
Automatic Data Filter Customization Using a Genetic Algorithm
Mandrake, Lukas
2013-01-01
This work predicts whether a retrieval algorithm will usefully determine CO2 concentration from an input spectrum of GOSAT (Greenhouse Gases Observing Satellite). This was done to eliminate needless runtime on atmospheric soundings that would never yield useful results. A space of 50 dimensions was examined for predictive power on the final CO2 results. Retrieval algorithms are frequently expensive to run, and wasted effort defeats requirements and expends needless resources. This algorithm could be used to help predict and filter unneeded runs in any computationally expensive regime. Traditional methods such as the Fischer discriminant analysis and decision trees can attempt to predict whether a sounding will be properly processed. However, this work sought to detect a subsection of the dimensional space that can be simply filtered out to eliminate unwanted runs. LDAs (linear discriminant analyses) and other systems examine the entire data and judge a "best fit," giving equal weight to complex and problematic regions as well as simple, clear-cut regions. In this implementation, a genetic space of "left" and "right" thresholds outside of which all data are rejected was defined. These left/right pairs are created for each of the 50 input dimensions. A genetic algorithm then runs through countless potential filter settings using a JPL computer cluster, optimizing the tossed-out data s yield (proper vs. improper run removal) and number of points tossed. This solution is robust to an arbitrary decision boundary within the data and avoids the global optimization problem of whole-dataset fitting using LDA or decision trees. It filters out runs that would not have produced useful CO2 values to save needless computation. This would be an algorithmic preprocessing improvement to any computationally expensive system.
DEFF Research Database (Denmark)
Cao, Bin; Zhao, Jianwei; Yang, Po
2018-01-01
-objective evolutionary algorithms the Cooperative Coevolutionary Generalized Differential Evolution 3, the Cooperative Multi-objective Differential Evolution and the Nondominated Sorting Genetic Algorithm III, the proposed algorithm addresses the deployment optimization problem efficiently and effectively.......Using immune algorithms is generally a time-intensive process especially for problems with a large number of variables. In this paper, we propose a distributed parallel cooperative coevolutionary multi-objective large-scale immune algorithm that is implemented using the message passing interface...... (MPI). The proposed algorithm is composed of three layers: objective, group and individual layers. First, for each objective in the multi-objective problem to be addressed, a subpopulation is used for optimization, and an archive population is used to optimize all the objectives. Second, the large...
Simulated Annealing Genetic Algorithm Based Schedule Risk Management of IT Outsourcing Project
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Fuqiang Lu
2017-01-01
Full Text Available IT outsourcing is an effective way to enhance the core competitiveness for many enterprises. But the schedule risk of IT outsourcing project may cause enormous economic loss to enterprise. In this paper, the Distributed Decision Making (DDM theory and the principal-agent theory are used to build a model for schedule risk management of IT outsourcing project. In addition, a hybrid algorithm combining simulated annealing (SA and genetic algorithm (GA is designed, namely, simulated annealing genetic algorithm (SAGA. The effect of the proposed model on the schedule risk management problem is analyzed in the simulation experiment. Meanwhile, the simulation results of the three algorithms GA, SA, and SAGA show that SAGA is the most superior one to the other two algorithms in terms of stability and convergence. Consequently, this paper provides the scientific quantitative proposal for the decision maker who needs to manage the schedule risk of IT outsourcing project.
Selection of individual features of a speech signal using genetic algorithms
Directory of Open Access Journals (Sweden)
Kamil Kamiński
2016-03-01
Full Text Available The paper presents an automatic speaker’s recognition system, implemented in the Matlab environment, and demonstrates how to achieve and optimize various elements of the system. The main emphasis was put on features selection of a speech signal using a genetic algorithm which takes into account synergy of features. The results of optimization of selected elements of a classifier have been also shown, including the number of Gaussian distributions used to model each of the voices. In addition, for creating voice models, a universal voice model has been used.[b]Keywords[/b]: biometrics, automatic speaker recognition, genetic algorithms, feature selection
Use of genetic algorithms for optimization of subchannel simulations
International Nuclear Information System (INIS)
Nava Dominguez, A.
2004-01-01
To facilitate the modeling of a rod fuel bundle, the most common used method consist in dividing the complex cross-sectional area in small subsections called subchannels. To close the system equations, a mixture model is used to represent the intersubchannel interactions. These interactions are as follows: diversion cross-flow, turbulent void diffusion, void drift and buoyancy drift. Amongst these mechanisms, the turbulent void diffusion and void drift are frequently modelled using diffusion coefficients. In this work, a novel approach has been employed where an existing subchannel code coupled to a genetic algorithm code which were used to optimize these coefficients. After several numerical simulations, a new objective function based in the principle of minimum dissipated energy was developed. The use of this function in the genetic algorithm coupled to the subchannel code, gave results in good agreement with the experimental data
Evaluation of algorithms used to order markers on genetic maps.
Mollinari, M; Margarido, G R A; Vencovsky, R; Garcia, A A F
2009-12-01
When building genetic maps, it is necessary to choose from several marker ordering algorithms and criteria, and the choice is not always simple. In this study, we evaluate the efficiency of algorithms try (TRY), seriation (SER), rapid chain delineation (RCD), recombination counting and ordering (RECORD) and unidirectional growth (UG), as well as the criteria PARF (product of adjacent recombination fractions), SARF (sum of adjacent recombination fractions), SALOD (sum of adjacent LOD scores) and LHMC (likelihood through hidden Markov chains), used with the RIPPLE algorithm for error verification, in the construction of genetic linkage maps. A linkage map of a hypothetical diploid and monoecious plant species was simulated containing one linkage group and 21 markers with fixed distance of 3 cM between them. In all, 700 F(2) populations were randomly simulated with 100 and 400 individuals with different combinations of dominant and co-dominant markers, as well as 10 and 20% of missing data. The simulations showed that, in the presence of co-dominant markers only, any combination of algorithm and criteria may be used, even for a reduced population size. In the case of a smaller proportion of dominant markers, any of the algorithms and criteria (except SALOD) investigated may be used. In the presence of high proportions of dominant markers and smaller samples (around 100), the probability of repulsion linkage increases between them and, in this case, use of the algorithms TRY and SER associated to RIPPLE with criterion LHMC would provide better results.
Optimization in optical systems revisited: Beyond genetic algorithms
Gagnon, Denis; Dumont, Joey; Dubé, Louis
2013-05-01
Designing integrated photonic devices such as waveguides, beam-splitters and beam-shapers often requires optimization of a cost function over a large solution space. Metaheuristics - algorithms based on empirical rules for exploring the solution space - are specifically tailored to those problems. One of the most widely used metaheuristics is the standard genetic algorithm (SGA), based on the evolution of a population of candidate solutions. However, the stochastic nature of the SGA sometimes prevents access to the optimal solution. Our goal is to show that a parallel tabu search (PTS) algorithm is more suited to optimization problems in general, and to photonics in particular. PTS is based on several search processes using a pool of diversified initial solutions. To assess the performance of both algorithms (SGA and PTS), we consider an integrated photonics design problem, the generation of arbitrary beam profiles using a two-dimensional waveguide-based dielectric structure. The authors acknowledge financial support from the Natural Sciences and Engineering Research Council of Canada (NSERC).
Multi-AGV path planning with double-path constraints by using an improved genetic algorithm.
Directory of Open Access Journals (Sweden)
Zengliang Han
Full Text Available This paper investigates an improved genetic algorithm on multiple automated guided vehicle (multi-AGV path planning. The innovations embody in two aspects. First, three-exchange crossover heuristic operators are used to produce more optimal offsprings for getting more information than with the traditional two-exchange crossover heuristic operators in the improved genetic algorithm. Second, double-path constraints of both minimizing the total path distance of all AGVs and minimizing single path distances of each AGV are exerted, gaining the optimal shortest total path distance. The simulation results show that the total path distance of all AGVs and the longest single AGV path distance are shortened by using the improved genetic algorithm.
An extensible infrastructure for fully automated spike sorting during online experiments.
Santhanam, Gopal; Sahani, Maneesh; Ryu, Stephen; Shenoy, Krishna
2004-01-01
When recording extracellular neural activity, it is often necessary to distinguish action potentials arising from distinct cells near the electrode tip, a process commonly referred to as "spike sorting." In a number of experiments, notably those that involve direct neuroprosthetic control of an effector, this cell-by-cell classification of the incoming signal must be achieved in real time. Several commercial offerings are available for this task, but all of these require some manual supervision per electrode, making each scheme cumbersome with large electrode counts. We present a new infrastructure that leverages existing unsupervised algorithms to sort and subsequently implement the resulting signal classification rules for each electrode using a commercially available Cerebus neural signal processor. We demonstrate an implementation of this infrastructure to classify signals from a cortical electrode array, using a probabilistic clustering algorithm (described elsewhere). The data were collected from a rhesus monkey performing a delayed center-out reach task. We used both sorted and unsorted (thresholded) action potentials from an array implanted in pre-motor cortex to "predict" the reach target, a common decoding operation in neuroprosthetic research. The use of sorted spikes led to an improvement in decoding accuracy of between 3.6 and 6.4%.
New MMC capacitor voltage balancing using sorting-less strategy in nearest level control
DEFF Research Database (Denmark)
Ricco, Mattia; Máthé, Lászlo; Teodorescu, Remus
2016-01-01
This paper proposes a new strategy for balancing the Capacitor Voltages (CVs) for Modular Multilevel Converters (MMCs). The balancing is one of the main challenges in MMC applications and it is usually solved by adopting a global arm control approach. For performing such an approach, a sorted list...... of the SubModules (SMs) according to their capacitor voltages is required. A common way to accomplish this task is to implement a sorting algorithm in the same controller used for the modulation technique. However, the execution time and the computational efforts of these kinds of algorithms increase very...
A New DG Multiobjective Optimization Method Based on an Improved Evolutionary Algorithm
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Wanxing Sheng
2013-01-01
Full Text Available A distribution generation (DG multiobjective optimization method based on an improved Pareto evolutionary algorithm is investigated in this paper. The improved Pareto evolutionary algorithm, which introduces a penalty factor in the objective function constraints, uses an adaptive crossover and a mutation operator in the evolutionary process and combines a simulated annealing iterative process. The proposed algorithm is utilized to the optimize DG injection models to maximize DG utilization while minimizing system loss and environmental pollution. A revised IEEE 33-bus system with multiple DG units was used to test the multiobjective optimization algorithm in a distribution power system. The proposed algorithm was implemented and compared with the strength Pareto evolutionary algorithm 2 (SPEA2, a particle swarm optimization (PSO algorithm, and nondominated sorting genetic algorithm II (NGSA-II. The comparison of the results demonstrates the validity and practicality of utilizing DG units in terms of economic dispatch and optimal operation in a distribution power system.
Genetic algorithm for chromaticity correction in diffraction limited storage rings
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M. P. Ehrlichman
2016-04-01
Full Text Available A multiobjective genetic algorithm is developed for optimizing nonlinearities in diffraction limited storage rings. This algorithm determines sextupole and octupole strengths for chromaticity correction that deliver optimized dynamic aperture and beam lifetime. The algorithm makes use of dominance constraints to breed desirable properties into the early generations. The momentum aperture is optimized indirectly by constraining the chromatic tune footprint and optimizing the off-energy dynamic aperture. The result is an effective and computationally efficient technique for correcting chromaticity in a storage ring while maintaining optimal dynamic aperture and beam lifetime.
Public Transport Route Finding using a Hybrid Genetic Algorithm
Directory of Open Access Journals (Sweden)
Liviu Adrian COTFAS
2011-01-01
Full Text Available In this paper we present a public transport route finding solution based on a hybrid genetic algorithm. The algorithm uses two heuristics that take into consideration the number of trans-fers and the remaining distance to the destination station in order to improve the convergence speed. The interface of the system uses the latest web technologies to offer both portability and advanced functionality. The approach has been evaluated using the data for the Bucharest public transport network.
Accurately tracking single-cell movement trajectories in microfluidic cell sorting devices.
Jeong, Jenny; Frohberg, Nicholas J; Zhou, Enlu; Sulchek, Todd; Qiu, Peng
2018-01-01
Microfluidics are routinely used to study cellular properties, including the efficient quantification of single-cell biomechanics and label-free cell sorting based on the biomechanical properties, such as elasticity, viscosity, stiffness, and adhesion. Both quantification and sorting applications require optimal design of the microfluidic devices and mathematical modeling of the interactions between cells, fluid, and the channel of the device. As a first step toward building such a mathematical model, we collected video recordings of cells moving through a ridged microfluidic channel designed to compress and redirect cells according to cell biomechanics. We developed an efficient algorithm that automatically and accurately tracked the cell trajectories in the recordings. We tested the algorithm on recordings of cells with different stiffness, and showed the correlation between cell stiffness and the tracked trajectories. Moreover, the tracking algorithm successfully picked up subtle differences of cell motion when passing through consecutive ridges. The algorithm for accurately tracking cell trajectories paves the way for future efforts of modeling the flow, forces, and dynamics of cell properties in microfluidics applications.
Accurately tracking single-cell movement trajectories in microfluidic cell sorting devices.
Directory of Open Access Journals (Sweden)
Jenny Jeong
Full Text Available Microfluidics are routinely used to study cellular properties, including the efficient quantification of single-cell biomechanics and label-free cell sorting based on the biomechanical properties, such as elasticity, viscosity, stiffness, and adhesion. Both quantification and sorting applications require optimal design of the microfluidic devices and mathematical modeling of the interactions between cells, fluid, and the channel of the device. As a first step toward building such a mathematical model, we collected video recordings of cells moving through a ridged microfluidic channel designed to compress and redirect cells according to cell biomechanics. We developed an efficient algorithm that automatically and accurately tracked the cell trajectories in the recordings. We tested the algorithm on recordings of cells with different stiffness, and showed the correlation between cell stiffness and the tracked trajectories. Moreover, the tracking algorithm successfully picked up subtle differences of cell motion when passing through consecutive ridges. The algorithm for accurately tracking cell trajectories paves the way for future efforts of modeling the flow, forces, and dynamics of cell properties in microfluidics applications.
Automated Test Assembly for Cognitive Diagnosis Models Using a Genetic Algorithm
Finkelman, Matthew; Kim, Wonsuk; Roussos, Louis A.
2009-01-01
Much recent psychometric literature has focused on cognitive diagnosis models (CDMs), a promising class of instruments used to measure the strengths and weaknesses of examinees. This article introduces a genetic algorithm to perform automated test assembly alongside CDMs. The algorithm is flexible in that it can be applied whether the goal is to…
A Genetic Algorithm Approach to the Optimization of a Radioactive Waste Treatment System
International Nuclear Information System (INIS)
Yang, Yeongjin; Lee, Kunjai; Koh, Y.; Mun, J.H.; Kim, H.S.
1998-01-01
This study is concerned with the applications of goal programming and genetic algorithm techniques to the analysis of management and operational problems in the radioactive waste treatment system (RWTS). A typical RWTS is modeled and solved by goal program and genetic algorithm to study and resolve the effects of conflicting objectives such as cost, limitation of released radioactivity to the environment, equipment utilization and total treatable radioactive waste volume before discharge and disposal. The developed model is validated and verified using actual data obtained from the RWTS at Kyoto University in Japan. The solution by goal programming and genetic algorithm would show the optimal operation point which is to maximize the total treatable radioactive waste volume and minimize the released radioactivity of liquid waste even under the restricted resources. The comparison of two methods shows very similar results. (author)
Clustering and Genetic Algorithm Based Hybrid Flowshop Scheduling with Multiple Operations
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Yingfeng Zhang
2014-01-01
Full Text Available This research is motivated by a flowshop scheduling problem of our collaborative manufacturing company for aeronautic products. The heat-treatment stage (HTS and precision forging stage (PFS of the case are selected as a two-stage hybrid flowshop system. In HTS, there are four parallel machines and each machine can process a batch of jobs simultaneously. In PFS, there are two machines. Each machine can install any module of the four modules for processing the workpeices with different sizes. The problem is characterized by many constraints, such as batching operation, blocking environment, and setup time and working time limitations of modules, and so forth. In order to deal with the above special characteristics, the clustering and genetic algorithm is used to calculate the good solution for the two-stage hybrid flowshop problem. The clustering is used to group the jobs according to the processing ranges of the different modules of PFS. The genetic algorithm is used to schedule the optimal sequence of the grouped jobs for the HTS and PFS. Finally, a case study is used to demonstrate the efficiency and effectiveness of the designed genetic algorithm.
Unfolding neutron spectra obtained from BS–TLD system using genetic algorithm
International Nuclear Information System (INIS)
Santos, J.A.L.; Silva, E.R.; Ferreira, T.A.E; Vilela, E.C.
2012-01-01
Due to the variability of neutron spectrum within the same environment, it is essential that the spectral distribution as a function of energy should be characterized. The precise information allows radiological quantities establishment related to that spectrum, but it is necessary that a spectrometric system covers a large interval of energy and an unfolding process is appropriate. This paper proposes use of a technique of Artificial Intelligence (AI) called genetic algorithm (GA), which uses bio-inspired mathematical models with the implementation of a specific matrix to unfolding data obtained from a combination of TLDs embedded in a BS system to characterize the neutron spectrum as a function of energy. The results obtained with this method were in accordance with reference spectra, thus enabling this technique to unfold neutron spectra with the BS–TLD system. - Highlights: ► The unfolding code used the artificial intelligence technique called genetic algorithms. ► A response matrix specific to the unfolding data obtained with the BS–TLD system is used by the AGLN. ► The observed results demonstrate the potential use of genetic algorithms in solving complex nuclear problems.
Improved Cost-Base Design of Water Distribution Networks using Genetic Algorithm
Moradzadeh Azar, Foad; Abghari, Hirad; Taghi Alami, Mohammad; Weijs, Steven
2010-05-01
Population growth and progressive extension of urbanization in different places of Iran cause an increasing demand for primary needs. The water, this vital liquid is the most important natural need for human life. Providing this natural need is requires the design and construction of water distribution networks, that incur enormous costs on the country's budget. Any reduction in these costs enable more people from society to access extreme profit least cost. Therefore, investment of Municipal councils need to maximize benefits or minimize expenditures. To achieve this purpose, the engineering design depends on the cost optimization techniques. This paper, presents optimization models based on genetic algorithm(GA) to find out the minimum design cost Mahabad City's (North West, Iran) water distribution network. By designing two models and comparing the resulting costs, the abilities of GA were determined. the GA based model could find optimum pipe diameters to reduce the design costs of network. Results show that the water distribution network design using Genetic Algorithm could lead to reduction of at least 7% in project costs in comparison to the classic model. Keywords: Genetic Algorithm, Optimum Design of Water Distribution Network, Mahabad City, Iran.
Comparison of Genetic Algorithm and Hill Climbing for Shortest Path Optimization Mapping
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Fronita Mona
2018-01-01
Full Text Available Traveling Salesman Problem (TSP is an optimization to find the shortest path to reach several destinations in one trip without passing through the same city and back again to the early departure city, the process is applied to the delivery systems. This comparison is done using two methods, namely optimization genetic algorithm and hill climbing. Hill Climbing works by directly selecting a new path that is exchanged with the neighbour’s to get the track distance smaller than the previous track, without testing. Genetic algorithms depend on the input parameters, they are the number of population, the probability of crossover, mutation probability and the number of generations. To simplify the process of determining the shortest path supported by the development of software that uses the google map API. Tests carried out as much as 20 times with the number of city 8, 16, 24 and 32 to see which method is optimal in terms of distance and time computation. Based on experiments conducted with a number of cities 3, 4, 5 and 6 producing the same value and optimal distance for the genetic algorithm and hill climbing, the value of this distance begins to differ with the number of city 7. The overall results shows that these tests, hill climbing are more optimal to number of small cities and the number of cities over 30 optimized using genetic algorithms.
A Sort-Last Rendering System over an Optical Backplane
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Yasuhiro Kirihata
2005-06-01
Full Text Available Sort-Last is a computer graphics technique for rendering extremely large data sets on clusters of computers. Sort-Last works by dividing the data set into even-sized chunks for parallel rendering and then composing the images to form the final result. Since sort-last rendering requires the movement of large amounts of image data among cluster nodes, the network interconnecting the nodes becomes a major bottleneck. In this paper, we describe a sort-last rendering system implemented on a cluster of computers whose nodes are connected by an all-optical switch. The rendering system introduces the notion of the Photonic Computing Engine, a computing system built dynamically by using the optical switch to create dedicated network connections among cluster nodes. The sort-last volume rendering algorithm was implemented on the Photonic Computing Engine, and its performance is evaluated. Prelimi- nary experiments show that performance is affected by the image composition time and average payload size. In an attempt to stabilize the performance of the system, we have designed a flow control mechanism that uses feedback messages to dynamically adjust the data flow rate within the computing engine.
Coordinated Control of PV Generation and EVs Charging Based on Improved DECell Algorithm
Directory of Open Access Journals (Sweden)
Guo Zhao
2015-01-01
Full Text Available Recently, the coordination of EVs’ charging and renewable energy has become a hot research all around the globe. Considering the requirements of EV owner and the influence of the PV output fluctuation on the power grid, a three-objective optimization model was established by controlling the EVs charging power during charging process. By integrating the meshing method into differential evolution cellular (DECell genetic algorithm, an improved differential evolution cellular (IDECell genetic algorithm was presented to solve the multiobjective optimization model. Compared to the NSGA-II and DECell, the IDECell algorithm showed better performance in the convergence and uniform distribution. Furthermore, the IDECell algorithm was applied to obtain the Pareto front of nondominated solutions. Followed by the normalized sorting of the nondominated solutions, the optimal solution was chosen to arrive at the optimized coordinated control strategy of PV generation and EVs charging. Compared to typical charging pattern, the optimized charging pattern could reduce the fluctuations of PV generation output power, satisfy the demand of EVs charging quantity, and save the total charging cost.
Genetic algorithms and the analysis of SnIa data
International Nuclear Information System (INIS)
Nesseris, Savvas
2011-01-01
The Genetic Algorithm is a heuristic that can be used to produce model independent solutions to an optimization problem, thus making it ideal for use in cosmology and more specifically in the analysis of type Ia supernovae data. In this work we use the Genetic Algorithms (GA) in order to derive a null test on the spatially flat cosmological constant model ΛCDM. This is done in two steps: first, we apply the GA to the Constitution SNIa data in order to acquire a model independent reconstruction of the expansion history of the Universe H(z) and second, we use the reconstructed H(z) in conjunction with the Om statistic, which is constant only for the ΛCDM model, to derive our constraints. We find that while ΛCDM is consistent with the data at the 2σ level, some deviations from ΛCDM model at low redshifts can be accommodated.
Directory of Open Access Journals (Sweden)
Bima Sena Bayu Dewantara
2014-12-01
Full Text Available Fuzzy rule optimization is a challenging step in the development of a fuzzy model. A simple two inputs fuzzy model may have thousands of combination of fuzzy rules when it deals with large number of input variations. Intuitively and trial‐error determination of fuzzy rule is very difficult. This paper addresses the problem of optimizing Fuzzy rule using Genetic Algorithm to compensate illumination effect in face recognition. Since uneven illumination contributes negative effects to the performance of face recognition, those effects must be compensated. We have developed a novel algorithmbased on a reflectance model to compensate the effect of illumination for human face recognition. We build a pair of model from a single image and reason those modelsusing Fuzzy.Fuzzy rule, then, is optimized using Genetic Algorithm. This approachspendsless computation cost by still keepinga high performance. Based on the experimental result, we can show that our algorithm is feasiblefor recognizing desired person under variable lighting conditions with faster computation time. Keywords: Face recognition, harsh illumination, reflectance model, fuzzy, genetic algorithm
Exergetic optimization of shell and tube heat exchangers using a genetic based algorithm
Energy Technology Data Exchange (ETDEWEB)
Oezcelik, Yavuz [Ege University, Bornova, Izmir (Turkey). Engineering Faculty, Chemical Engineering Department
2007-08-15
In the computer-based optimization, many thousands of alternative shell and tube heat exchangers may be examined by varying the high number of exchanger parameters such as tube length, tube outer diameter, pitch size, layout angle, baffle space ratio, number of tube side passes. In the present study, a genetic based algorithm was developed, programmed, and applied to estimate the optimum values of discrete and continuous variables of the MINLP (mixed integer nonlinear programming) test problems. The results of the test problems show that the genetic based algorithm programmed can estimate the acceptable values of continuous variables and optimum values of integer variables. Finally the genetic based algorithm was extended to make parametric studies and to find optimum configuration of heat exchangers by minimizing the sum of the annual capital cost and exergetic cost of the shell and tube heat exchangers. The results of the example problems show that the proposed algorithm is applicable to find optimum and near optimum alternatives of the shell and tube heat exchanger configurations. (author)
Optimal Wind Turbines Micrositing in Onshore Wind Farms Using Fuzzy Genetic Algorithm
Directory of Open Access Journals (Sweden)
Jun Yang
2015-01-01
Full Text Available With the fast growth in the number and size of installed wind farms (WFs around the world, optimal wind turbines (WTs micrositing has become a challenge from both technological and mathematical points of view. An appropriate layout of wind turbines is crucial to obtain adequate performance with respect to the development and operation of the wind power plant during its life span. This work presents a fuzzy genetic algorithm (FGA for maximizing the economic profitability of the project. The algorithm considers a new WF model including several important factors to the design of the layout. The model consists of wake loss, terrain effect, and economic benefits, which can be calculated by locations of wind turbines. The results demonstrate that the algorithm performs better than genetic algorithm, in terms of maximum values of net annual value of wind power plants and computational burden.
A Hybrid Fuzzy Genetic Algorithm for an Adaptive Traffic Signal System
Directory of Open Access Journals (Sweden)
S. M. Odeh
2015-01-01
Full Text Available This paper presents a hybrid algorithm that combines Fuzzy Logic Controller (FLC and Genetic Algorithms (GAs and its application on a traffic signal system. FLCs have been widely used in many applications in diverse areas, such as control system, pattern recognition, signal processing, and forecasting. They are, essentially, rule-based systems, in which the definition of these rules and fuzzy membership functions is generally based on verbally formulated rules that overlap through the parameter space. They have a great influence over the performance of the system. On the other hand, the Genetic Algorithm is a metaheuristic that provides a robust search in complex spaces. In this work, it has been used to adapt the decision rules of FLCs that define an intelligent traffic signal system, obtaining a higher performance than a classical FLC-based control. The simulation results yielded by the hybrid algorithm show an improvement of up to 34% in the performance with respect to a standard traffic signal controller, Conventional Traffic Signal Controller (CTC, and up to 31% in the comparison with a traditional logic controller, FLC.
GenClust: A genetic algorithm for clustering gene expression data
Directory of Open Access Journals (Sweden)
Raimondi Alessandra
2005-12-01
Full Text Available Abstract Background Clustering is a key step in the analysis of gene expression data, and in fact, many classical clustering algorithms are used, or more innovative ones have been designed and validated for the task. Despite the widespread use of artificial intelligence techniques in bioinformatics and, more generally, data analysis, there are very few clustering algorithms based on the genetic paradigm, yet that paradigm has great potential in finding good heuristic solutions to a difficult optimization problem such as clustering. Results GenClust is a new genetic algorithm for clustering gene expression data. It has two key features: (a a novel coding of the search space that is simple, compact and easy to update; (b it can be used naturally in conjunction with data driven internal validation methods. We have experimented with the FOM methodology, specifically conceived for validating clusters of gene expression data. The validity of GenClust has been assessed experimentally on real data sets, both with the use of validation measures and in comparison with other algorithms, i.e., Average Link, Cast, Click and K-means. Conclusion Experiments show that none of the algorithms we have used is markedly superior to the others across data sets and validation measures; i.e., in many cases the observed differences between the worst and best performing algorithm may be statistically insignificant and they could be considered equivalent. However, there are cases in which an algorithm may be better than others and therefore worthwhile. In particular, experiments for GenClust show that, although simple in its data representation, it converges very rapidly to a local optimum and that its ability to identify meaningful clusters is comparable, and sometimes superior, to that of more sophisticated algorithms. In addition, it is well suited for use in conjunction with data driven internal validation measures and, in particular, the FOM methodology.
Jing Chen
2015-01-01
This study takes the concept of food logistics distribution as the breakthrough point, by means of the aim of optimization of food logistics distribution routes and analysis of the optimization model of food logistics route, as well as the interpretation of the genetic algorithm, it discusses the optimization of food logistics distribution route based on genetic and cluster scheme algorithm.
O'Brien, J K; Steinman, K J; Robeck, T R
2009-01-01
Efforts toward the conservation and captive breeding of wildlife can be enhanced by sperm sorting and associated reproductive technologies such as sperm cryopreservation and artificial insemination (AI). Sex ratio management is of particular significance to species which naturally exist in female-dominated social groups. A bias of the sex ratio towards females of these species will greatly assist in maintaining socially cohesive groups and minimizing male-male aggression. Another application of this technology potentially exists for endangered species, as the preferential production of females can enable propagation of those species at a faster rate. The particular assisted reproductive technology (ART) used in conjunction with sperm sorting for the production of offspring is largely determined by the quality and quantity of spermatozoa following sorting and preservation processes. Regardless of the ART selected, breeding decisions involving sex-sorted spermatozoa should be made in conjunction with appropriate genetic management. Zoological-based research on reproductive physiology and assisted reproduction, including sperm sorting, is being conducted on numerous terrestrial and marine mammals. The wildlife species for which the technology has undergone the most advance is the bottlenose dolphin. AI using sex-sorted fresh or frozen-thawed spermatozoa has become a valuable tool for the genetic and reproductive management of captive bottlenose dolphins with six pre-sexed calves, all of the predetermined sex born to date.
Design Optimization of Space Launch Vehicles Using a Genetic Algorithm
National Research Council Canada - National Science Library
Bayley, Douglas J
2007-01-01
.... A genetic algorithm (GA) was employed to optimize the design of the space launch vehicle. A cost model was incorporated into the optimization process with the goal of minimizing the overall vehicle cost...
Maintenance optimization in nuclear power plants through genetic algorithms
International Nuclear Information System (INIS)
Munoz, A.; Martorell, S.; Serradell, V.
1999-01-01
Establishing suitable scheduled maintenance tasks leads to optimizing the reliability of nuclear power plant safety systems. The articles addresses this subject, whilst endeavoring to tackle an overall optimization process for component availability and safety systems through the use of genetic algorithms. (Author) 20 refs
Influence of crossover methods used by genetic algorithm-based ...
Indian Academy of Sciences (India)
numerical methods like Newton–Raphson, sequential homotopy calculation, Walsh ... But the paper does not touch upon the elements of crossover operators. ... if SHE problems are solved with optimization tools like GA (Schutten ..... Goldberg D E 1989 Genetic algorithms in search, optimization and machine learning.
Implementation of Genetic Algorithm in Control Structure of Induction Motor A.C. Drive
Directory of Open Access Journals (Sweden)
BRANDSTETTER, P.
2014-11-01
Full Text Available Modern concepts of control systems with digital signal processors allow the implementation of time-consuming control algorithms in real-time, for example soft computing methods. The paper deals with the design and technical implementation of a genetic algorithm for setting proportional and integral gain of the speed controller of the A.C. drive with the vector-controlled induction motor. Important simulations and experimental measurements have been realized that confirm the correctness of the proposed speed controller tuned by the genetic algorithm and the quality speed response of the A.C. drive with changing parameters and disturbance variables, such as changes in load torque.
Directory of Open Access Journals (Sweden)
Heidar Sadeghzadeh
2015-08-01
Full Text Available Heat transfer rate and cost significantly affect designs of shell and tube heat exchangers. From the viewpoint of engineering, an optimum design is obtained via maximum heat transfer rate and minimum cost. Here, an analysis of a radial, finned, shell and tube heat exchanger is carried out, considering nine design parameters: tube arrangement, tube diameter, tube pitch, tube length, number of tubes, fin height, fin thickness, baffle spacing ratio and number of fins per unit length of tube. The “Delaware modified” technique is used to determine heat transfer coefficients and the shell-side pressure drop. In this technique, the baffle cut is 20 percent and the baffle ratio limits range from 0.2 to 0.4. The optimization of the objective functions (maximum heat transfer rate and minimum total cost is performed using a non-dominated sorting genetic algorithm (NSGA-II, and compared against a one-objective algorithm, to find the best solutions. The results are depicted as a set of solutions on a Pareto front, and show that the heat transfer rate ranges from 3517 to 7075 kW. Also, the minimum and maximum objective functions are specified, allowing the designer to select the best points among these solutions based on requirements. Additionally, variations of shell-side pressure drop with total cost are depicted, and indicate that the pressure drop ranges from 3.8 to 46.7 kPa.
Bandyopadhyay, Sanghamitra
2007-01-01
This book provides a unified framework that describes how genetic learning can be used to design pattern recognition and learning systems. It examines how a search technique, the genetic algorithm, can be used for pattern classification mainly through approximating decision boundaries. Coverage also demonstrates the effectiveness of the genetic classifiers vis-à-vis several widely used classifiers, including neural networks.
A cluster analysis on road traffic accidents using genetic algorithms
Saharan, Sabariah; Baragona, Roberto
2017-04-01
The analysis of traffic road accidents is increasingly important because of the accidents cost and public road safety. The availability or large data sets makes the study of factors that affect the frequency and severity accidents are viable. However, the data are often highly unbalanced and overlapped. We deal with the data set of the road traffic accidents recorded in Christchurch, New Zealand, from 2000-2009 with a total of 26440 accidents. The data is in a binary set and there are 50 factors road traffic accidents with four level of severity. We used genetic algorithm for the analysis because we are in the presence of a large unbalanced data set and standard clustering like k-means algorithm may not be suitable for the task. The genetic algorithm based on clustering for unknown K, (GCUK) has been used to identify the factors associated with accidents of different levels of severity. The results provided us with an interesting insight into the relationship between factors and accidents severity level and suggest that the two main factors that contributes to fatal accidents are "Speed greater than 60 km h" and "Did not see other people until it was too late". A comparison with the k-means algorithm and the independent component analysis is performed to validate the results.
A hybrid genetic algorithm for the distributed permutation flowshop scheduling problem
Directory of Open Access Journals (Sweden)
Jian Gao
2011-08-01
Full Text Available Distributed Permutation Flowshop Scheduling Problem (DPFSP is a newly proposed scheduling problem, which is a generalization of classical permutation flow shop scheduling problem. The DPFSP is NP-hard in general. It is in the early stages of studies on algorithms for solving this problem. In this paper, we propose a GA-based algorithm, denoted by GA_LS, for solving this problem with objective to minimize the maximum completion time. In the proposed GA_LS, crossover and mutation operators are designed to make it suitable for the representation of DPFSP solutions, where the set of partial job sequences is employed. Furthermore, GA_LS utilizes an efficient local search method to explore neighboring solutions. The local search method uses three proposed rules that move jobs within a factory or between two factories. Intensive experiments on the benchmark instances, extended from Taillard instances, are carried out. The results indicate that the proposed hybrid genetic algorithm can obtain better solutions than all the existing algorithms for the DPFSP, since it obtains better relative percentage deviation and differences of the results are also statistically significant. It is also seen that best-known solutions for most instances are updated by our algorithm. Moreover, we also show the efficiency of the GA_LS by comparing with similar genetic algorithms with the existing local search methods.
Optimal design of link systems using successive zooming genetic algorithm
Kwon, Young-Doo; Sohn, Chang-hyun; Kwon, Soon-Bum; Lim, Jae-gyoo
2009-07-01
Link-systems have been around for a long time and are still used to control motion in diverse applications such as automobiles, robots and industrial machinery. This study presents a procedure involving the use of a genetic algorithm for the optimal design of single four-bar link systems and a double four-bar link system used in diesel engine. We adopted the Successive Zooming Genetic Algorithm (SZGA), which has one of the most rapid convergence rates among global search algorithms. The results are verified by experiment and the Recurdyn dynamic motion analysis package. During the optimal design of single four-bar link systems, we found in the case of identical input/output (IO) angles that the initial and final configurations show certain symmetry. For the double link system, we introduced weighting factors for the multi-objective functions, which minimize the difference between output angles, providing balanced engine performance, as well as the difference between final output angle and the desired magnitudes of final output angle. We adopted a graphical method to select a proper ratio between the weighting factors.
BONDI-97 A novel neutron energy spectrum unfolding tool using a genetic algorithm
Mukherjee, B
1999-01-01
The neutron spectrum unfolding procedure using the count rate data obtained from a set of Bonner sphere neutron detectors requires the solution of the Fredholm integral equation of the first kind by using complex mathematical methods. This paper reports a new approach for the unfolding of neutron spectra using the Genetic Algorithm tool BONDI-97 (BOnner sphere Neutron DIfferentiation). The BONDI-97 was used as the input for Genetic Algorithm engine EVOLVER to search for a globally optimised solution vector from a population of randomly generated solutions. This solution vector corresponds to the unfolded neutron energy spectrum. The Genetic Algorithm engine emulates the Darwinian 'Survival of the Fittest' strategy, the key ingredient of the 'Theory of Evolution'. The spectra of sup 2 sup 4 sup 1 Am/Be (alpha,n) and sup 2 sup 3 sup 9 Pu/Be (alpha,n) neutron sources were unfolded using the BONDI-97 tool. (author)
Efficient Feedforward Linearization Technique Using Genetic Algorithms for OFDM Systems
Directory of Open Access Journals (Sweden)
García Paloma
2010-01-01
Full Text Available Feedforward is a linearization method that simultaneously offers wide bandwidth and good intermodulation distortion suppression; so it is a good choice for Orthogonal Frequency Division Multiplexing (OFDM systems. Feedforward structure consists of two loops, being necessary an accurate adjustment between them along the time, and when temperature, environmental, or operating changes are produced. Amplitude and phase imbalances of the circuit elements in both loops produce mismatched effects that lead to degrade its performance. A method is proposed to compensate these mismatches, introducing two complex coefficients calculated by means of a genetic algorithm. A full study is carried out to choose the optimal parameters of the genetic algorithm applied to wideband systems based on OFDM technologies, which are very sensitive to nonlinear distortions. The method functionality has been verified by means of simulation.
Branch-pipe-routing approach for ships using improved genetic algorithm
Sui, Haiteng; Niu, Wentie
2016-09-01
Branch-pipe routing plays fundamental and critical roles in ship-pipe design. The branch-pipe-routing problem is a complex combinatorial optimization problem and is thus difficult to solve when depending only on human experts. A modified genetic-algorithm-based approach is proposed in this paper to solve this problem. The simplified layout space is first divided into threedimensional (3D) grids to build its mathematical model. Branch pipes in layout space are regarded as a combination of several two-point pipes, and the pipe route between two connection points is generated using an improved maze algorithm. The coding of branch pipes is then defined, and the genetic operators are devised, especially the complete crossover strategy that greatly accelerates the convergence speed. Finally, simulation tests demonstrate the performance of proposed method.
Yan, Jingwen; Du, Lei; Kim, Sungeun; Risacher, Shannon L; Huang, Heng; Moore, Jason H; Saykin, Andrew J; Shen, Li
2014-09-01
Imaging genetics is an emerging field that studies the influence of genetic variation on brain structure and function. The major task is to examine the association between genetic markers such as single-nucleotide polymorphisms (SNPs) and quantitative traits (QTs) extracted from neuroimaging data. The complexity of these datasets has presented critical bioinformatics challenges that require new enabling tools. Sparse canonical correlation analysis (SCCA) is a bi-multivariate technique used in imaging genetics to identify complex multi-SNP-multi-QT associations. However, most of the existing SCCA algorithms are designed using the soft thresholding method, which assumes that the input features are independent from one another. This assumption clearly does not hold for the imaging genetic data. In this article, we propose a new knowledge-guided SCCA algorithm (KG-SCCA) to overcome this limitation as well as improve learning results by incorporating valuable prior knowledge. The proposed KG-SCCA method is able to model two types of prior knowledge: one as a group structure (e.g. linkage disequilibrium blocks among SNPs) and the other as a network structure (e.g. gene co-expression network among brain regions). The new model incorporates these prior structures by introducing new regularization terms to encourage weight similarity between grouped or connected features. A new algorithm is designed to solve the KG-SCCA model without imposing the independence constraint on the input features. We demonstrate the effectiveness of our algorithm with both synthetic and real data. For real data, using an Alzheimer's disease (AD) cohort, we examine the imaging genetic associations between all SNPs in the APOE gene (i.e. top AD gene) and amyloid deposition measures among cortical regions (i.e. a major AD hallmark). In comparison with a widely used SCCA implementation, our KG-SCCA algorithm produces not only improved cross-validation performances but also biologically meaningful
Use of a genetic algorithm to solve two-fluid flow problems on an NCUBE multiprocessor computer
International Nuclear Information System (INIS)
Pryor, R.J.; Cline, D.D.
1992-01-01
A method of solving the two-phase fluid flow equations using a genetic algorithm on a NCUBE multiprocessor computer is presented. The topics discussed are the two-phase flow equations, the genetic representation of the unknowns, the fitness function, the genetic operators, and the implementation of the algorithm on the NCUBE computer. The efficiency of the implementation is investigated using a pipe blowdown problem. Effects of varying the genetic parameters and the number of processors are presented
Innovation of genetic algorithm code GenA for WWER fuel loading optimization
International Nuclear Information System (INIS)
Sustek, J.
2005-01-01
One of the stochastic search techniques - genetic algorithms - was recently used for optimization of arrangement of fuel assemblies (FA) in core of reactors WWER-440 and WWER-1000. Basic algorithm was modified by incorporation of SPEA scheme. Both were enhanced and some results are presented (Authors)
Optimizing Support Vector Machine Parameters with Genetic Algorithm for Credit Risk Assessment
Manurung, Jonson; Mawengkang, Herman; Zamzami, Elviawaty
2017-12-01
Support vector machine (SVM) is a popular classification method known to have strong generalization capabilities. SVM can solve the problem of classification and linear regression or nonlinear kernel which can be a learning algorithm for the ability of classification and regression. However, SVM also has a weakness that is difficult to determine the optimal parameter value. SVM calculates the best linear separator on the input feature space according to the training data. To classify data which are non-linearly separable, SVM uses kernel tricks to transform the data into a linearly separable data on a higher dimension feature space. The kernel trick using various kinds of kernel functions, such as : linear kernel, polynomial, radial base function (RBF) and sigmoid. Each function has parameters which affect the accuracy of SVM classification. To solve the problem genetic algorithms are proposed to be applied as the optimal parameter value search algorithm thus increasing the best classification accuracy on SVM. Data taken from UCI repository of machine learning database: Australian Credit Approval. The results show that the combination of SVM and genetic algorithms is effective in improving classification accuracy. Genetic algorithms has been shown to be effective in systematically finding optimal kernel parameters for SVM, instead of randomly selected kernel parameters. The best accuracy for data has been upgraded from kernel Linear: 85.12%, polynomial: 81.76%, RBF: 77.22% Sigmoid: 78.70%. However, for bigger data sizes, this method is not practical because it takes a lot of time.
Optical flow optimization using parallel genetic algorithm
Zavala-Romero, Olmo; Botella, Guillermo; Meyer-Bäse, Anke; Meyer Base, Uwe
2011-06-01
A new approach to optimize the parameters of a gradient-based optical flow model using a parallel genetic algorithm (GA) is proposed. The main characteristics of the optical flow algorithm are its bio-inspiration and robustness against contrast, static patterns and noise, besides working consistently with several optical illusions where other algorithms fail. This model depends on many parameters which conform the number of channels, the orientations required, the length and shape of the kernel functions used in the convolution stage, among many more. The GA is used to find a set of parameters which improve the accuracy of the optical flow on inputs where the ground-truth data is available. This set of parameters helps to understand which of them are better suited for each type of inputs and can be used to estimate the parameters of the optical flow algorithm when used with videos that share similar characteristics. The proposed implementation takes into account the embarrassingly parallel nature of the GA and uses the OpenMP Application Programming Interface (API) to speedup the process of estimating an optimal set of parameters. The information obtained in this work can be used to dynamically reconfigure systems, with potential applications in robotics, medical imaging and tracking.
Wang, Jun; Zhou, Bi-hua; Zhou, Shu-dao; Sheng, Zheng
2015-01-01
The paper proposes a novel function expression method to forecast chaotic time series, using an improved genetic-simulated annealing (IGSA) algorithm to establish the optimum function expression that describes the behavior of time series. In order to deal with the weakness associated with the genetic algorithm, the proposed algorithm incorporates the simulated annealing operation which has the strong local search ability into the genetic algorithm to enhance the performance of optimization; besides, the fitness function and genetic operators are also improved. Finally, the method is applied to the chaotic time series of Quadratic and Rossler maps for validation. The effect of noise in the chaotic time series is also studied numerically. The numerical results verify that the method can forecast chaotic time series with high precision and effectiveness, and the forecasting precision with certain noise is also satisfactory. It can be concluded that the IGSA algorithm is energy-efficient and superior.
A genetic algorithm approach to recognition and data mining
Energy Technology Data Exchange (ETDEWEB)
Punch, W.F.; Goodman, E.D.; Min, Pei [Michigan State Univ., East Lansing, MI (United States)] [and others
1996-12-31
We review here our use of genetic algorithm (GA) and genetic programming (GP) techniques to perform {open_quotes}data mining,{close_quotes} the discovery of particular/important data within large datasets, by finding optimal data classifications using known examples. Our first experiments concentrated on the use of a K-nearest neighbor algorithm in combination with a GA. The GA selected weights for each feature so as to optimize knn classification based on a linear combination of features. This combined GA-knn approach was successfully applied to both generated and real-world data. We later extended this work by substituting a GP for the GA. The GP-knn could not only optimize data classification via linear combinations of features but also determine functional relationships among the features. This allowed for improved performance and new information on important relationships among features. We review the effectiveness of the overall approach on examples from biology and compare the effectiveness of the GA and GP.