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Sample records for silene latifolia syn

  1. Dioecious Silene latifolia plants show sexual dimorphism in the vegetative stage

    Czech Academy of Sciences Publication Activity Database

    Žlůvová, Jitka; Žák, Jiří; Janoušek, Bohuslav; Vyskot, Boris

    2010-01-01

    Roč. 10, č. 208 (2010), s. 1-5 ISSN 1471-2229 R&D Projects: GA AV ČR(CZ) KJB600040801; GA AV ČR(CZ) IAA600040801; GA ČR(CZ) GAP501/10/0102 Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702 Keywords : sex dimorphism * Silene latifolia * dioecious plants Subject RIV: BO - Biophysics Impact factor: 4.085, year: 2010

  2. Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Macas, Jiří; Kejnovský, Eduard; Neumann, Pavel; Novák, Petr; Koblížková, Andrea; Vyskot, Boris

    2011-01-01

    Roč. 6, č. 11 (2011), e27335 E-ISSN 1932-6203 R&D Projects: GA MŠk(CZ) OC10037; GA MŠk(CZ) LC06004; GA MŠk(CZ) LH11058; GA ČR(CZ) GAP501/10/0102; GA ČR(CZ) GAP305/10/0930 Institutional research plan: CEZ:AV0Z50510513; CEZ:AV0Z50040702 Keywords : Plant genome * Sequencing-Based Analyses * Repetitive DNA * Silene latifolia Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 4.092, year: 2011

  3. Identification of a Novel Retrotransposon with Sex Chromosome-Specific Distribution in Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Králová, Tereza; Čegan, Radim; Kubát, Zdeněk; Vrána, Jan; Vyskot, Boris; Vogel, Ivan; Kejnovský, Eduard; Hobza, Roman

    2014-01-01

    Roč. 143, 1-3 (2014), s. 87-95 ISSN 1424-8581 R&D Projects: GA MŠk(CZ) LM2010005; GA ČR(CZ) GAP501/10/0102; GA ČR(CZ) GAP501/12/2220; GA ČR(CZ) GAP305/10/0930; GA ČR(CZ) GA522/09/0083; GA MŠk(CZ) LO1204 Institutional support: RVO:68081707 Keywords : Microdissection * Sex chromosomes * Silene latifolia (white campion) Subject RIV: BO - Biophysics; EF - Botanics (UEB-Q) Impact factor: 1.561, year: 2014

  4. Effects of pollination timing and distance on seed production in a dioecious weed Silene latifolia

    Science.gov (United States)

    Anderson, Jay F.; Duddu, Hema S. N.; Shirtliffe, Steven J.; Benaragama, Dilshan; Syrovy, Lena D.; Stanley, Katherine A.; Haile, Teketel A.

    2015-11-01

    Silene latifolia Poir. (white cockle or white campion) is an important invasive weed in North American agriculture. It exhibits dioecy, therefore, both male and female plants are required in order for seed production to occur. However, dioecious species being invasive is not common because of their limitations in pollination and subsequent seed production. The objective of this study is to determine the effect of pollination timing and distance on seed production of Silene latifolia. A series of experiments including pollination exclusion, timing and pollination distance were conducted in 2009 and 2010 at or around Saskatoon, Saskatchewan. For pollination exclusion, exclosures were built around the natural female plants for exclosure, sham-exclosure, and male and female combined treatments. Pollination timing was studied by applying exclosure, non-exclosure, night-exclosure, and day-exclosure treatments to individual female plants. Female plants were transplanted along a linear interval at six different distances from the pollen source to study the effect of pollination distance. S. latifolia was exclusively insect-pollinated and pollination occurred both day and night; however, in one year, pollination occurred mainly at night. Female plants that were in the range of 0-4 m from a compatible pollen source experienced no limitation to pollination. However, when the distance was increased further up to 128 m, pollination levels and subsequent seed production were declined. Moreover, there were differences in seed production between years suggesting that pollination was affected by the environmental conditions during pollination and the crop that white cockle was grown in. These experiments indicate that seed production in S. latifolia is limited by insect-pollination. Although there was pollination limitation for seed production at greater distances from a pollen source, the high fecundity rate (3000-18000 seeds per plant) resulted in a large seed output. Thus, we

  5. Host-related genetic differentiation in the anther smut fungus Microbotryum violaceum in sympatric, parapatric and allopatric populations of two host species Silene latifolia and S. dioica

    NARCIS (Netherlands)

    Van Putten, W.F.; Biere, A.; Van Damme, J.M.M.

    2005-01-01

    We investigated genetic diversity in West European populations of the fungal pathogen Microbotryum violaceum in sympatric, parapatric and allopatric populations of the host species Silene latifolia and S. dioica, using four polymorphic microsatellite loci. In allopatric host populations, the fungus

  6. Host-related genetic differentiation in the anther smut fungus Microbotryum violaceum in sympatric, parapatric and allopatric populations of two host species Silene latifolia and S-dioica

    NARCIS (Netherlands)

    Van Putten, WF; Biere, A; Van Damme, JMM

    We investigated genetic diversity in West European populations of the fungal pathogen Microbotryum violaceum in sympatric, parapatric and allopatric populations of the host species Silene latifolia and S. dioica, using four polymorphic microsatellite loci. In allopatric host populations, the fungus

  7. Comparative analysis of a plant pseudoautosomal region (PAR) in Silene latifolia with the corresponding S. vulgaris autosome

    Czech Academy of Sciences Publication Activity Database

    Blavet, N.; Blavet, Hana; Čegan, Radim; Zemp, N.; Ždánská, Jana; Janoušek, Bohuslav; Hobza, Roman; Widmer, A.

    2012-01-01

    Roč. 13, č. 226 (2012), s. 1-9 ISSN 1471-2164 R&D Projects: GA ČR(CZ) GA522/09/0083; GA ČR GBP501/12/G090 Institutional research plan: CEZ:AV0Z50040702 Keywords : BAC library * pseudoautosomal region * Silene latifolia Subject RIV: BO - Biophysics Impact factor: 4.397, year: 2012

  8. Genomic diversity in two related plant species with and without sex chromosomes--Silene latifolia and S. vulgaris.

    Directory of Open Access Journals (Sweden)

    Radim Cegan

    Full Text Available Genome size evolution is a complex process influenced by polyploidization, satellite DNA accumulation, and expansion of retroelements. How this process could be affected by different reproductive strategies is still poorly understood.We analyzed differences in the number and distribution of major repetitive DNA elements in two closely related species, Silene latifolia and S. vulgaris. Both species are diploid and possess the same chromosome number (2n = 24, but differ in their genome size and mode of reproduction. The dioecious S. latifolia (1C = 2.70 pg DNA possesses sex chromosomes and its genome is 2.5× larger than that of the gynodioecious S. vulgaris (1C = 1.13 pg DNA, which does not possess sex chromosomes. We discovered that the genome of S. latifolia is larger mainly due to the expansion of Ogre retrotransposons. Surprisingly, the centromeric STAR-C and TR1 tandem repeats were found to be more abundant in S. vulgaris, the species with the smaller genome. We further examined the distribution of major repetitive sequences in related species in the Caryophyllaceae family. The results of FISH (fluorescence in situ hybridization on mitotic chromosomes with the Retand element indicate that large rearrangements occurred during the evolution of the Caryophyllaceae family.Our data demonstrate that the evolution of genome size in the genus Silene is accompanied by the expansion of different repetitive elements with specific patterns in the dioecious species possessing the sex chromosomes.

  9. Determinants of genetic structure in a nonequilibrium metapopulation of the plant Silene latifolia.

    Directory of Open Access Journals (Sweden)

    Peter D Fields

    Full Text Available Population genetic differentiation will be influenced by the demographic history of populations, opportunities for migration among neighboring demes and founder effects associated with repeated extinction and recolonization. In natural populations, these factors are expected to interact with each other and their magnitudes will vary depending on the spatial distribution and age structure of local demes. Although each of these effects has been individually identified as important in structuring genetic variance, their relative magnitude is seldom estimated in nature. We conducted a population genetic analysis in a metapopulation of the angiosperm, Silene latifolia, from which we had more than 20 years of data on the spatial distribution, demographic history, and extinction and colonization of demes. We used hierarchical Bayesian methods to disentangle which features of the populations contributed to among population variation in allele frequencies, including the magnitude and direction of their effects. We show that population age, long-term size and degree of connectivity all combine to affect the distribution of genetic variance; small, recently-founded, isolated populations contributed most to increase FST in the metapopulation. However, the effects of population size and population age are best understood as being modulated through the effects of connectivity to other extant populations, i.e. FST diminishes as populations age, but at a rate that depends how isolated the population is. These spatial and temporal correlates of population structure give insight into how migration, founder effect and within-deme genetic drift have combined to enhance and restrict genetic divergence in a natural metapopulation.

  10. Coping with third parties in a nursery pollination mutualism: Hadena bicruris avoids oviposition on pathogen-infected, less rewarding Silene latifolia

    NARCIS (Netherlands)

    Biere, A.; Honders, S.C.

    2006-01-01

    In nursery pollination systems, pollinator offspring usually feed on pollinated fruits or seeds. Costs and benefits of the interaction for plant and pollinator, and hence its local outcome (antagonismmutualism), can be affected by the presence of 'third-party' species. Infection of Silene latifolia

  11. Intraspecific competition and mating between fungal strains of the anther smut Microbotryum violaceum from the host plants Silene latifolia and S-dioica.

    NARCIS (Netherlands)

    Van Putten, W.F.; Biere, A.; Van Damme, J.M.M.

    2003-01-01

    We studied intraspecific competition and assortative mating between strains of the anther smut fungus Microbotryum violaceum from two of its host species, Silene latifolia and S. dioica. Specifically, we investigated whether strains from allopatric host populations have higher competitive ability on

  12. Intraspecific competition and mating between fungal strains of the anther smut Microbotryum violaceum from the host plants Silene latifolia and S-dioica

    NARCIS (Netherlands)

    Van Putten, WF; Biere, A; Van Damme, JMM

    We studied intraspecific competition and assortative mating between strains of the anther smut fungus Microbotryum violaceum from two of its host species, Silene latifolia and S. dioica. Specifically. we investigated whether strains from allopatric host populations have higher competitive ability on

  13. Spatial expression dynamics of Men-9 delineate the third floral whorl in male and female flowers of dioecious Silene latifolia.

    Science.gov (United States)

    Robertson, S E; Li, Y; Scutt, C P; Willis, M E; Gilmartin, P M

    1997-07-01

    Sex determination in Silene latifolia is controlled by heteromorphic sex chromosomes. Female flowers have five fused carpels and ten arrested stamen primordia. The male-determining Y chromosome overrides female development to suppress carpel formation and promote stamen development. The isolation and characterization of two S. latifolia. Male enhanced cDNAs, Men-9a and Men-9b, which probably represent different alleles of a novel gene are reported here. Men-9a and Men-9b share 91.8% coding sequence nucleotide identity, yet only 85.4% amino acid identity. The Men-9 cDNAs are related to the previously reported MROS3 cDNA from S. latifolia. However, MROS3 is not present in the S. latifolia population used in these studies and the expression dynamics of Men-9a and Men-9b contrast dramatically with those reported for MROS3. Men-9 cDNAs are expressed primarily in anthers of young male flowers, with highest expression in 1-2 mm buds. Men-9 expression is also observed at a low level in female flowers. In situ hybridization analysis reveals two phases of Men-9 expression. The first phase is during a common stage of early stamen development in male and female flowers prior to stamen arrest in female flowers. The second phase of Men-9 expression is maximal in the epidermis and endothecium of Y chromosome- and Ustilago violacea-induced stamens; expression in male and female flowers extends to the epidermis of the staminal nectaries with strict boundaries at the second and fourth whorls, Men-9 gene expression therefore delineates the boundaries of the third floral whorl in S. latifolia flowers.

  14. A new physical mapping approach refines the sex-determining gene positions on the Silene latifolia Y-chromosome

    Science.gov (United States)

    Kazama, Yusuke; Ishii, Kotaro; Aonuma, Wataru; Ikeda, Tokihiro; Kawamoto, Hiroki; Koizumi, Ayako; Filatov, Dmitry A.; Chibalina, Margarita; Bergero, Roberta; Charlesworth, Deborah; Abe, Tomoko; Kawano, Shigeyuki

    2016-01-01

    Sex chromosomes are particularly interesting regions of the genome for both molecular genetics and evolutionary studies; yet, for most species, we lack basic information, such as the gene order along the chromosome. Because they lack recombination, Y-linked genes cannot be mapped genetically, leaving physical mapping as the only option for establishing the extent of synteny and homology with the X chromosome. Here, we developed a novel and general method for deletion mapping of non-recombining regions by solving “the travelling salesman problem”, and evaluate its accuracy using simulated datasets. Unlike the existing radiation hybrid approach, this method allows us to combine deletion mutants from different experiments and sources. We applied our method to a set of newly generated deletion mutants in the dioecious plant Silene latifolia and refined the locations of the sex-determining loci on its Y chromosome map.

  15. Fungal Infection Induces Sex-Specific Transcriptional Changes and Alters Sexual Dimorphism in the Dioecious Plant Silene latifolia.

    Directory of Open Access Journals (Sweden)

    Niklaus Zemp

    2015-10-01

    Full Text Available Sexual dimorphism, including differences in morphology, behavior and physiology between females and males, is widespread in animals and plants and is shaped by gene expression differences between the sexes. Such expression differences may also underlie sex-specific responses of hosts to pathogen infections, most notably when pathogens induce partial sex reversal in infected hosts. The genetic changes associated with sex-specific responses to pathogen infections on the one hand, and sexual dimorphism on the other hand, remain poorly understood. The dioecious White Campion (Silene latifolia displays sexual dimorphism in floral traits and infection with the smut fungus Micobrotryum lychnidis-dioicae induces a partial sex reversal in females. We find strong sex-specific responses to pathogen infection and reduced sexual dimorphism in infected S. latifolia. This provides a direct link between pathogen-mediated changes in sex-biased gene expression and altered sexual dimorphism in the host. Expression changes following infection affected mainly genes with male-biased expression in healthy plants. In females, these genes were up-regulated, leading to a masculinization of the transcriptome. In contrast, infection in males was associated with down-regulation of these genes, leading to a demasculinization of the transcriptome. To a lesser extent, genes with female-biased expression in healthy plants were also affected in opposite directions in the two sexes. These genes were overall down-regulated in females and up-regulated in males, causing, respectively, a defeminization in infected females and a feminization of the transcriptome in infected males. Our results reveal strong sex-specific responses to pathogen infection in a dioecious plant and provide a link between pathogen-induced changes in sex-biased gene expression and sexual dimorphism.

  16. Fungal Infection Induces Sex-Specific Transcriptional Changes and Alters Sexual Dimorphism in the Dioecious Plant Silene latifolia.

    Science.gov (United States)

    Zemp, Niklaus; Tavares, Raquel; Widmer, Alex

    2015-10-01

    Sexual dimorphism, including differences in morphology, behavior and physiology between females and males, is widespread in animals and plants and is shaped by gene expression differences between the sexes. Such expression differences may also underlie sex-specific responses of hosts to pathogen infections, most notably when pathogens induce partial sex reversal in infected hosts. The genetic changes associated with sex-specific responses to pathogen infections on the one hand, and sexual dimorphism on the other hand, remain poorly understood. The dioecious White Campion (Silene latifolia) displays sexual dimorphism in floral traits and infection with the smut fungus Micobrotryum lychnidis-dioicae induces a partial sex reversal in females. We find strong sex-specific responses to pathogen infection and reduced sexual dimorphism in infected S. latifolia. This provides a direct link between pathogen-mediated changes in sex-biased gene expression and altered sexual dimorphism in the host. Expression changes following infection affected mainly genes with male-biased expression in healthy plants. In females, these genes were up-regulated, leading to a masculinization of the transcriptome. In contrast, infection in males was associated with down-regulation of these genes, leading to a demasculinization of the transcriptome. To a lesser extent, genes with female-biased expression in healthy plants were also affected in opposite directions in the two sexes. These genes were overall down-regulated in females and up-regulated in males, causing, respectively, a defeminization in infected females and a feminization of the transcriptome in infected males. Our results reveal strong sex-specific responses to pathogen infection in a dioecious plant and provide a link between pathogen-induced changes in sex-biased gene expression and sexual dimorphism.

  17. Structure and evolution of Apetala3, a sex-linked gene in Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Čegan, Radim; Marais, G.A.B.; Kubeková, Hana; Blavet, N.; Widmer, A.; Vyskot, Boris; Doležel, Jaroslav; Šafář, Jan; Hobza, Roman

    2010-01-01

    Roč. 10, č. 180 (2010), s. 1-10 ISSN 1471-2229 R&D Projects: GA ČR(CZ) GA522/09/0083; GA ČR(CZ) GD204/09/H002; GA AV ČR(CZ) KJB600040901 Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702; CEZ:AV0Z50380511 Keywords : sex chromosomes evolution * Apetala3 * Silene Subject RIV: BO - Biophysics Impact factor: 4.085, year: 2010

  18. Substitution rates in the X- and Y-linked genes of the plants, Silene latifolia and S. dioica.

    Science.gov (United States)

    Filatov, Dmitry A; Charlesworth, Deborah

    2002-06-01

    Theory predicts that selection should be less effective in the nonrecombining genes of Y-chromosomes, relative to the situation for genes on the other chromosomes, and this should lead to the accumulation of deleterious nonsynonymous substitutions. In addition, synonymous substitution rates may differ between X- and Y-linked genes because of the male-driven evolution effect and also because of actual differences in per-replication mutation rates between the sex chromosomes. Here, we report the first study of synonymous and nonsynonymous substitution rates on plant sex chromosomes. We sequenced two pairs of sex-linked genes, SlX1-SlY1 and SlX4-SlY4, from dioecious Silene latifolia and S. dioica, and their non-sex-linked homologues from nondioecious S. vulgaris and Lychnis flos-jovis, respectively. The rate of nonsynonymous substitutions in the SlY4 gene is significantly higher than that in the SlX4 gene. Silent substitution rates are also significantly higher in both Y-linked genes, compared with their X-linked homologues. The higher nonsynonymous substitution rate in the SlY4 gene is therefore likely to be caused by a mutation rate difference between the sex chromosomes. The difference in silent substitution rates between the SlX4 and SlY4 genes is too great to be explained solely by a higher per-generation mutation rate in males than females. It is thus probably caused by a difference in per-replication mutation rates between the sex chromosomes. This suggests that the local mutation rate can change in a relatively short evolutionary time.

  19. Semi-automatic laser beam microdissection of the Y chromosome and analysis of Y chromosome DNA in a dioecious plant, Silene latifolia

    International Nuclear Information System (INIS)

    Matsunaga, S.; Kawano, S.; Michimoto, T.; Higashiyama, T.; Nakao, S.; Sakai, A.; Kuroiwa, T.

    1999-01-01

    Silene latifolia has heteromorphic sex chromosomes, the X and Y chromosomes. The Y chromosome, which is thought to carry the male determining gene, was isolated by UV laser microdissection and amplified by degenerate oligonucleotide-primed PCR. In situ chromosome suppression of the amplified Y chromosome DNA in the presence of female genomic DNA as a competitor showed that the microdissected Y chromosome DNA did not specifically hybridize to the Y chromosome, but-hybridized to all chromosomes. This result suggests that the Y chromosome does not contain Y chromosome-enriched repetitive sequences. A repetitive sequence in the microdissected Y chromosome, RMY1, was isolated while screening repetitive sequences in the amplified Y chromosome. Part of the nucleotide sequence shared a similarity to that of X-43.1, which was isolated from microdissected X chromosomes. Since fluorescence in situ hybridization analysis with RMY1 demonstrated that RMY1 was localized at the ends of the chromosome, RMY1 may be a subtelomeric repetitive sequence. Regarding the sex chromosomes, RMY1 was detected at both ends of the X chromosome and at one end near the pseudoautosomal region of the Y chromosome. The different localization of RMY1 on the sex chromosomes provides a clue to the problem of how the sex chromosomes arose from autosomes

  20. Genomic diversity in two related plant species with and without sex chromosomes - Silene latifolia and S. vulgaris

    Czech Academy of Sciences Publication Activity Database

    Čegan, Radim; Vyskot, Boris; Kejnovský, Eduard; Kubát, Zdeněk; Blavet, Hana; Šafář, Jan; Doležel, Jaroslav; Blavet, N.; Hobza, Roman

    2012-01-01

    Roč. 7, č. 2 (2012), e31898 E-ISSN 1932-6203 R&D Projects: GA AV ČR(CZ) KJB600040901; GA ČR(CZ) GPP501/10/P483; GA ČR(CZ) GAP501/10/0102; GA ČR(CZ) GD204/09/H002; GA ČR(CZ) GAP305/10/0930; GA ČR(CZ) GA522/09/0083 Institutional research plan: CEZ:AV0Z50040702; CEZ:AV0Z50040507; CEZ:AV0Z50380511 Keywords : Silene * repetitive DNA * genome size Subject RIV: BO - Biophysics Impact factor: 3.730, year: 2012

  1. The slowdown of Y chromosome expansion in dioecious Silene latifolia due to DNA loss and male-specific silencing of retrotransposons

    Czech Academy of Sciences Publication Activity Database

    Puterova, Janka; Kubát, Zdeněk; Kejnovský, Eduard; Jesionek, Wojciech; Čížková, Jana; Vyskot, Boris; Hobza, Roman

    2018-01-01

    Roč. 19, FEB2018 (2018) ISSN 1471-2164 R&D Projects: GA ČR GJ15-21523Y Institutional support: RVO:68081707 ; RVO:61389030 Keywords : sex-linked genes * plant silene * transposable elements Subject RIV: EF - Botanics; EF - Botanics (UEB-Q) OBOR OECD: Plant sciences, botany; Plant sciences, botany (UEB-Q) Impact factor: 3.729, year: 2016

  2. Patterns of molecular evolution in dioecious and non-dioecious Silene

    Czech Academy of Sciences Publication Activity Database

    Kaefer, J.; Talianová, Martina; Bigot, T.; Michu, Elleni; Gueguen, L.; Widmer, A.; Žlůvová, Jitka; Glemin, S.; Marais, G.A.B.

    2013-01-01

    Roč. 26, č. 2 (2013), s. 335-346 ISSN 1010-061X R&D Projects: GA ČR(CZ) GA521/08/0932; GA ČR(CZ) GD204/09/H002; GA ČR(CZ) GBP501/12/G090 Institutional support: RVO:68081707 Keywords : purifying selection * reproductive systems * Silene latifolia Subject RIV: BO - Biophysics Impact factor: 3.483, year: 2013

  3. Silene noctiflora L., present in the flora of Kosovo and Metohija (Serbia

    Directory of Open Access Journals (Sweden)

    Prodanović, D.

    2016-12-01

    Full Text Available The genus Silene (family Caryophyllaceae comprises more than 700 species and it is one of the larger genera of the World’s flora. Studying the flora of the plain part of Kosovo and Metohija, in the village of Gračanica, on the eastern rim of the Kosovo basin (approximately 10 km to the south of Priština, near the Gračanka stream, we identified a weed and ruderal species, Silene noctiflora. The part of the stream bank is urbanised and turned into a quay. The quay is regularly maintained implying that the banks are regularly weeded and the riverbeds are cleaned as the Typha latifolia species rapidly grows; it may be the reason why this species was not immediately detected and appropriately identified. Except for the afore mentioned locality, the species was also reported on the neglected arable fields and tilths, around the unkempt orchards, along the new tarmac road between Gračanica and Laplje Selo, on the locality called Labura. Silene noctiflora is not mentioned for the region of Kosovo and Metohija in the new and revised edition of the book Flora of Serbia 2.

  4. Strong Accumulation of Chloroplast DNA in the Y Chromosomes of Rumex acetosa and Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Šteflová, Pavlína; Hobza, Roman; Vyskot, Boris; Kejnovský, Eduard

    2014-01-01

    Roč. 142, č. 1 (2014), s. 59-65 ISSN 1424-8581 R&D Projects: GA ČR(CZ) GAP305/10/0930; GA ČR(CZ) GAP501/10/0102; GA ČR(CZ) GBP501/12/G090; GA ČR GAP501/12/2220; GA ČR(CZ) GA522/09/0083; GA MŠk(CZ) LO1204 Institutional research plan: CEZ:AV0Z50040702 Institutional support: RVO:68081707 Keywords : Chloroplast DNA * Rumex acetosa * Sex chromosomes Subject RIV: BO - Biophysics Impact factor: 1.561, year: 2014

  5. Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Blavet, Nicolas; Blavet, Hana; Muyle, A.; Käfer, J.; Cegan, R.; Deschamps, C.; Zemp, N.; Mousset, S.; Aubourg, S.; Bergero, R.; Charlesworth, D.; Hobza, Roman; Widmer, A.; Marais, G.A.B.

    2015-01-01

    Roč. 16, JUL 25 (2015), s. 546 ISSN 1471-2164 R&D Projects: GA ČR GAP501/12/2220 Institutional support: RVO:61389030 Keywords : Sex chromosomes * Sex-linked genes * Plant Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.867, year: 2015

  6. Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Blavet, N.; Blavet, Hana; Muyle, A.; Kaefer, J.; Čegan, Radim; Deschamps, C.; Zemp, N.; Mousset, S.; Aubourg, S.; Bergero, R.; Charlesworth, D.; Hobza, Roman; Widmer, A.; Marais, G.A.B.

    2015-01-01

    Roč. 16, JUL 2015 (2015) ISSN 1471-2164 R&D Projects: GA ČR(CZ) GAP501/12/2220 Institutional support: RVO:68081707 Keywords : Y-CHROMOSOME * EVOLUTION * REARRANGEMENTS Subject RIV: BO - Biophysics Impact factor: 3.867, year: 2015

  7. The role of chromosomal rearrangements in the evolution of Silene latifolia sex chromosomes

    Czech Academy of Sciences Publication Activity Database

    Hobza, Roman; Kejnovský, Eduard; Vyskot, Boris; Widmer, A.

    2007-01-01

    Roč. 278, č. 6 (2007), s. 633-638 ISSN 1617-4615 R&D Projects: GA ČR(CZ) GA204/05/2097; GA ČR(CZ) GA521/06/0056 Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702 Keywords : chromosomal rearrangements * sex chromosomes * FISH Subject RIV: BO - Biophysics Impact factor: 2.978, year: 2007

  8. Accumulation of chloroplast DNA sequences on the Y chromosome of Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Kejnovský, Eduard; Kubát, Zdeněk; Hobza, Roman; Lengerová, Martina; Sato, S.; Tabata, S.; Fukui, K.; Matsunaga, S.; Vyskot, Boris

    2006-01-01

    Roč. 128, 1-3 (2006), s. 167-175 ISSN 0016-6707 R&D Projects: GA ČR(CZ) GA204/05/2097; GA ČR(CZ) GD204/05/H505; GA AV ČR(CZ) 1QS500040507 Institutional research plan: CEZ:AV0Z50040507 Keywords : accumulation * chloroplast DNA * Y chromosome Subject RIV: BO - Biophysics Impact factor: 1.492, year: 2006

  9. SynGrant

    Indian Academy of Sciences (India)

    IAS Admin

    There are no requirements of nationality, age, gender, education, income, language, or material/social accomplishments. SynTalk would consider the long term (100–200+ years) impact potential of the chosen research area, and, all else being equal, give preference to applicants who do not have access to mainstream ...

  10. Inbreeding and oubreeding effects on pollen fitness and zygote survival in Silene nutans (Caryophyllaceae)

    DEFF Research Database (Denmark)

    Hauser, Thure Pavlo; Siegismund, H.R.

    2000-01-01

    inbreeding depression, oubreeding effects, outcrossing, pollen fitness, selfing, Silene nutans, zygote survival......inbreeding depression, oubreeding effects, outcrossing, pollen fitness, selfing, Silene nutans, zygote survival...

  11. MK17, a specific marker closely linked to the gynoecium suppression region on the Y chromosome in Silene latifolia

    Czech Academy of Sciences Publication Activity Database

    Hobza, Roman; Hrušáková, P.; Šafář, Jan; Bartoš, Jan; Janoušek, Bohuslav; Žlůvová, Jitka; Michu, Elleni; Doležel, Jaroslav; Vyskot, Boris

    2006-01-01

    Roč. 113, č. 2 (2006), s. 280-287 ISSN 0040-5752 R&D Projects: GA ČR(CZ) GA521/06/0056; GA ČR(CZ) GD204/05/H505; GA ČR(CZ) GA521/05/2076; GA AV ČR(CZ) 1QS500040507 Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50380511 Keywords : sex chromosomes * melandrium-album * evolution Subject RIV: BO - Biophysics Impact factor: 2.715, year: 2006

  12. An accumulation of tandem DNA repeats on the Y chromosome in Silene latifolia during early stages of sex chromosome evolution

    Czech Academy of Sciences Publication Activity Database

    Hobza, Roman; Lengerová, Martina; Svoboda, J.; Kubeková, H.; Kejnovský, Eduard; Vyskot, Boris

    2006-01-01

    Roč. 115, č. 5 (2006), s. 376-382 ISSN 0009-5915 R&D Projects: GA ČR(CZ) GA521/06/0056; GA ČR(CZ) GA204/05/2097 Institutional research plan: CEZ:AV0Z50040507 Keywords : plant melandrium-album * dioecious plant * X-chromosome Subject RIV: BO - Biophysics Impact factor: 4.065, year: 2006

  13. De novo transcriptome assembly of heavy metal tolerant Silene dioica

    Czech Academy of Sciences Publication Activity Database

    Čegan, R.; Hudzieczek, V.; Hobza, Roman

    2017-01-01

    Roč. 11, MAR (2017), s. 118-119 ISSN 2213-5960 Institutional support: RVO:61389030 Keywords : genome * Silene dioica * RNA-Seq * Transcriptome * Heavy metal tolerance * Sex chromosomes Subject RIV: EB - Genetics ; Molecular Biology OBOR OECD: Plant sciences, botany

  14. Primula latifolia Lapeyr. and Primula vulgaris Hudson flavonoids.

    Science.gov (United States)

    Colombo, Paola S; Flamini, Guido; Fico, Gelsomina

    2014-01-01

    Three flavonoids were isolated from the leaf MeOH extracts of Primula latifolia Lapeyr. and Primula vulgaris Hudson collected from Italian Alps: rutin (1) and kaempferol 3-neohesperidoside (2) from P. latifolia, and kaempferol 3-β-O-glucopyranosyl-(1 → 2) gentiobioside (3) from P. vulgaris. The structures were assigned on the basis of their (1)H and (13)C NMR data, including those derived from 2D NMR, as well as on HPLC-MS results. This article is the first to report on P. vulgaris tissue flavonoids after Harborne's study in 1968 and the first work ever on these compounds from P. latifolia.

  15. DRDC Ottawa Participation in the SILENE Accident Dosimetry Intercomparison Exercise. June 10-21, 2002

    National Research Council Canada - National Science Library

    Prud'homme-Lalonde, L

    2002-01-01

    .... The SILENE International Accident Dosimetry Intercomparison Exercise at Valduc, France in June 2002 coincided with DRDC Ottawa work designed to refine its proposed criticality dosimetry system...

  16. Oral administration of Gongronema latifolia leaf meal: Implications ...

    African Journals Online (AJOL)

    Jane

    2011-06-27

    Jun 27, 2011 ... 1Department of Animal Science, University of Nigeria, Nsukka. Enugu State ... supplement in poultry production. ... broiler feed, motivated this research. ... Fresh leaves of G. latifolia were harvested from a selected clone,.

  17. Research program and uses of the solution fueled reactor SILENE

    International Nuclear Information System (INIS)

    Barbry, F.; Ratel, R.

    1985-09-01

    Designed and operated by the Nuclear Protection and Safety Institute of the CEA, SILENE is an original small sized reactor fueled with an uranyl nitrate solution. The reactor is capable to operate in three modes: ''Pulse'' operation (high power levels up to 1000 Megawatts during several millisecond), ''Free evolution'' operation (simulation of criticality accident excursions), ''Steady state'' operation in a power range of 0.01 W to 1 kW. The core can be surrounded by appropriate shields (lead, polyethylene) to vary the leakage radiations and the gamma to neutron dose ratio. It's possible to insert in the central cavity of the annular core vessel some capsules, devices or samples to be submitted to very high radiations levels. The research activities are mainly devoted towards nuclear safety studies: the criticality accident studies, and the behavior of oxide fuels under transient conditions. Some examples of tests are presented. As to other applications of the SILENE facility, the main studies now in progress deal with: designing and calibration of Health physics intrumentation, neutron and gamma dosimetry, and, radiobiology. Once the characteristics of radiation field are qualified by calculations and experimental techniques, SILENE will be proposed as a reference source [fr

  18. [Examples of the keeping of drugs during the XVIth, XVIIth and XVIIIth centuries: silenes and drawers].

    Science.gov (United States)

    Fievet, B

    1998-01-01

    Silenes are wooden boxes with colourful paintings for the keeping of drugs and can be found nowadays in three collections in France: Hotel-Dieu in Troyes (Aube), a pharmacy in Bauge (Maine-et-Loire) and St-Roch museum in Issoudun (Indre). Drawers can be related to silenes but they are more ordinary and less attractive.

  19. Fuel solution criticality accident studies with the SILENE reactor: phenomenology, consequences and simulated intervention

    International Nuclear Information System (INIS)

    Barbry, F.

    1984-01-01

    After defining the content and the objectives of criticality accident studies, the SILENE reactor, a means of studying fuel solution criticality accidents, is presented. Information obtained from the CRAC and SILENE experimental programs are then presented; they concern power excursion phenomenology, radiological consequences, and finally guide-lines for current and future programs

  20. Py4Syn: Python for synchrotrons.

    Science.gov (United States)

    Slepicka, H H; Canova, H F; Beniz, D B; Piton, J R

    2015-09-01

    In this report, Py4Syn, an open-source Python-based library for data acquisition, device manipulation, scan routines and other helper functions, is presented. Driven by easy-to-use and scalability ideals, Py4Syn offers control system agnostic solution and high customization level for scans and data output, covering distinct techniques and facilities. Here, most of the library functionalities are described, examples of use are shown and ideas for future implementations are presented.

  1. Dalbergia latifolia Roxb. (East Indian Rosewood) of Leguminosae is ...

    Indian Academy of Sciences (India)

    Dalbergia latifolia Roxb. (East Indian Rosewood) of Leguminosae is a large deciduous or nearly evergreen tree that grows in mixed deciduous forests with teak. Leaves are compound. The creamy white flowers are borne on branched inflorescences. The indehiscent dry pod bears. 1-4 seeds. Inset - a juvenile plant.

  2. Analgesic compounds from Scorzonera latifolia (Fisch. and Mey.) DC

    Czech Academy of Sciences Publication Activity Database

    Bahadir, Ö.; Citoglu, G. S.; Šmejkal, K.; Dall Acqua, S.; Özbek, H.; Cvačka, Josef; Žemlička, M.

    2010-01-01

    Roč. 131, č. 1 (2010), s. 83-87 ISSN 0378-8741 Institutional research plan: CEZ:AV0Z40550506 Keywords : Scorzonera latifolia * analgesic activity * triterpenes Subject RIV: CC - Organic Chemistry Impact factor: 2.466, year: 2010

  3. antimicrobial activities of methanolic extract of gongronema latifolia ...

    African Journals Online (AJOL)

    DJFLEX

    antimicrobial agents (Esimone et al., 2005). G. latifolia has been ... (Levine et al., 1993; Okeke et al., 2000; Oronsaye and. Oziegbe, 2002). .... availabilities of their chemical diversity (Abad et al.,. 2007). ... Akpan, P.A., 2004. Food from the ...

  4. The SILENE reactor: an instrument suitable for studying the impact of intermediate and high radiation doses

    International Nuclear Information System (INIS)

    Verray, B.; Leo, Y.; Fouillaud, P.

    2002-01-01

    Designed in 1974 to study the phenomenology and consequences of a criticality accident, the SILENE experimental reactor, an intense source of mixed neutron and gamma radiation, is also suited to radiobiological studies. (author)

  5. Stochastic Model of TCP SYN Attacks

    Directory of Open Access Journals (Sweden)

    Simona Ramanauskaitė

    2011-08-01

    Full Text Available A great proportion of essential services are moving into internet space making the threat of DoS attacks even more actual. To estimate the real risk of some kind of denial of service (DoS attack in real world is difficult, but mathematical and software models make this task easier. In this paper we overview the ways of implementing DoS attack models and offer a stochastic model of SYN flooding attack. It allows evaluating the potential threat of SYN flooding attacks, taking into account both the legitimate system flow as well as the possible attack power. At the same time we can assess the effect of such parameters as buffer capacity, open connection storage in the buffer or filte­ring efficiency on the success of different SYN flooding attacks. This model can be used for other type of memory depletion denial of service attacks.Article in Lithuanian

  6. Characterization of SynCAM surface trafficking using a SynCAM derived ligand with high homophilic binding affinity

    International Nuclear Information System (INIS)

    Breillat, Christelle; Thoumine, Olivier; Choquet, Daniel

    2007-01-01

    In order to better probe SynCAM function in neurons, we produced a fusion protein between the extracellular domain of SynCAM1 and the constant fragment of human IgG (SynCAM-Fc). Whether in soluble form or immobilized on latex microspheres, the chimera bound specifically to the surface of hippocampal neurons and recruited endogenous SynCAM molecules. SynCAM-Fc was also used in combination with Quantum Dots to follow the mobility of transfected SynCAM receptors at the neuronal surface. Both immobile and highly mobile SynCAM were found. Thus, SynCAM-Fc behaves as a high affinity ligand that can be used to study the function of SynCAM at the neuronal membrane

  7. Measurement of the gamma field around Silene reactor

    International Nuclear Information System (INIS)

    Spurny, Frantisek; Medioni, Roger.

    1976-07-01

    A method for measuring the gamma component in the mixed field emitted by the Silene facility implanted in Valduc is investigated. Various thermoluminescent phosphors (natural LiF, 7 LiF, SO 4 Ca, Al 2 O 3 ) in containers of different sizes and types are used. The detectors results are corrected for their neutron sensitivity by using coefficients which were determined in previous studies. Alumina is shown to be the most suitable detector for this problem because of the dose ranges to be measured and its low sensitivity to neutrons. A series of measurements carried out at many points in the irradiation hall shows a good homogeneity in the gamma distribution. Results are given for different distances from the source and for a 10 17 fissions power of the reactor [fr

  8. Constructive applications of composite gypsum reinforced with Typha Latifolia fibres

    Directory of Open Access Journals (Sweden)

    Garcia Santos, A.

    2004-03-01

    Full Text Available The present research analyses the possibility to reinforce gypsum using enea fibres (Typha Latifolia creating a compound material in wich the fibres contribute to increase mechanical resistance, producing as well a reduction of the weight and a possible regulation of the set time.

    La investigación presente analiza la posibilidad de reforzar los morteros de escayola mediante la utilización dé fibras de Typha Latifolia, creando un material compuesto en el que las fibras contribuyen al aumento de resistencia mecánica, a la vez que se produce una reducción del peso y una regulación de los tiempos de fraguado. Las propiedades de estos materiales hacen que, en determinadas aplicaciones, su utilización resulte ventajosa con respecto a materiales tradicionales.

  9. Effect of aspect on distribution pattern of Anogeissus latifolia (Wall ...

    African Journals Online (AJOL)

    This paper reports on effect of aspect on distribution pattern of Anogeissus latifolia is an important fuel, fodder and timber species of sub-tropical belt of Garhwal Himalaya. The study was carried out in two aspects i.e., south-east (SE) aspect and south-west (SW) aspect in sub-tropical region (300 29' N and 780 24' E) of ...

  10. Phenolic compounds from the roots of Valeriana officinalis var. latifolia

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Peng-Cheng; Ran, Xin-Hui; Luo, Huai-Rong; Liu, Yu-Qing; Zhou Jun [State Key Laboratory of Phytochemistry and Plant Resources in West China. Kunming Institute of Botany, Chinese Academy of Sciences (China); Ma, Qing-Yun; Zhao, You-Xing, E-mail: zhoujun3264@yahoo.com.cn, E-mail: zhaoyouxing@itbb.org.cn [Key Laboratory of Biology and Genetic Resources of Tropical Crops. Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology. Chinese Academy of Tropical Agriculture Sciences (China)

    2013-09-15

    A new benzofuran neolignan, dihydrodehydrodiconiferyl alcohol 9-isovalerate, along with ten known phenolic compounds, olivil, pinoresinol, 8-hydroxypinoresinol, pinorespiol, 8-hydroxy- 7-epipinoresinol, trans-p-hydroxyphenyl- propenoic acid, cis-p-hydroxyphenyl-propenoic acid, ferulic acid, isoferulic acid and isovanillin were isolated from the roots of Valeriana officinalis var. latifolia. Their structures and configurations were elucidated on the basis of spectroscopic methods. The inhibitory activity for acetylcholinesterase (AChE) and enhancing activity on nerve growth factor (NGF)-mediated neurite outgrowth in PC12 cells of dihydrodehydrodiconiferyl alcohol 9-isovaterate and olivil were evaluated. (author)

  11. Studies on the terpene metabolism in Lavandula latifolia Medicus

    OpenAIRE

    Mendoza Poudereux, Isabel

    2013-01-01

    Resumen en castellano Estudio del metabolismo de los terpenos en Lavandula latifolia Medicus Justificación y objetivos La biosíntesis de los dos precursores universales de los terpenos vegetales, el isopentenildifosfato (IPP) y el dimetilalildifosfato (DMAPP), es un proceso complejo en el que intervienen dos rutas metabólicas independientes (Rodríguez-Concepción y Boronat, 2002; Lange y Ahkami, 2013): La ruta del mevalonato (MVA) que opera en el citosol, retículo endoplasmático y ...

  12. Phosphorus conservation by evergreenness of mountain laurel. [Kalmia latifolia

    Energy Technology Data Exchange (ETDEWEB)

    Thomas, W A [Oak Ridge National Lab., TN; Grigal, D F

    1976-01-01

    Field studies and compartmental model analyses demonstrate that the evergreen nature of mountain laurel Kalmia latifolia L. helps conserve phosphorus on infertile sites. The perennial canopy continuously adds P to the forest floor through foliar leaching and year-round leaf fall. Slow mineralization of leaf litter provides a steady addition of available P. The evergreenness of Kalmia allows it to utilize increases in available P, thus keeping it in circulation through biological tissues. Retention of a sufficient P supply in this manner allows the site to respond when changes such as disturbance or succession occur in the system.

  13. Phenolic compounds from the roots of Valeriana officinalis var. latifolia

    International Nuclear Information System (INIS)

    Wang, Peng-Cheng; Ran, Xin-Hui; Luo, Huai-Rong; Liu, Yu-Qing; Zhou Jun; Ma, Qing-Yun; Zhao, You-Xing

    2013-01-01

    A new benzofuran neolignan, dihydrodehydrodiconiferyl alcohol 9-isovalerate, along with ten known phenolic compounds, olivil, pinoresinol, 8-hydroxypinoresinol, pinorespiol, 8-hydroxy- 7-epipinoresinol, trans-p-hydroxyphenyl- propenoic acid, cis-p-hydroxyphenyl-propenoic acid, ferulic acid, isoferulic acid and isovanillin were isolated from the roots of Valeriana officinalis var. latifolia. Their structures and configurations were elucidated on the basis of spectroscopic methods. The inhibitory activity for acetylcholinesterase (AChE) and enhancing activity on nerve growth factor (NGF)-mediated neurite outgrowth in PC12 cells of dihydrodehydrodiconiferyl alcohol 9-isovaterate and olivil were evaluated. (author)

  14. Breeding system in the dichogamous hermaphrodite Silene acutifolia (Caryophyllaceae).

    Science.gov (United States)

    Buide, M L; Guitian, J

    2002-12-01

    The breeding system of the dichogamous hermaphrodite species Silene acutifolia, endemic to north-west Spain and north and central Portugal, is examined. Pollen germinability and style-stigma receptivity were analysed to determine whether protandry is a barrier to self-fertilization. By 48 h after anthesis, pollen germinability had declined to approx. 10 %. The short straight styles are not receptive when flowers first open. They gradually elongate and curve outwards, develop stigma papillae and become receptive. There is no clear separation between stigma and style: the stigma papillae appear in a line along the length of the style. Fruit set is high regardless of pollen source; however, seed set is significantly reduced after both spontaneous and facilitated autogamy. Seed set following spontaneous autogamy was 30 % (86 % in controls) in 1998 and 33 % (87 % in controls) in 1999. Seed set following facilitated autogamy was 62 % (86 % in controls) in 1998 and 67 % (89 % in controls) in 1999. Thus, separation of the male and female phases does not prevent production of seeds by self-pollination, although it does reduce the likelihood of this. Furthermore, results of the present experiments indicate that this species has no self-incompatibility mechanisms (self-compatibility index = 0.98). The selfing rate in the study population was 0.41, which is supported by the lack of self-incompatibility systems and by the incomplete protandry. Copyright 2002 Annals of Botany Company

  15. Review of the CRAC and SILENE Criticality Accident Studies

    International Nuclear Information System (INIS)

    Barbry, F.; Fouillaud, P.; Grivot, P.; Reverdy, L.

    2009-01-01

    In 1967, the Commissariat et l'Energie Atomique (French Atomic Energy Agency) performed its first research on criticality accidents for the purpose of limiting their impact on people, the environment, and nuclear facilities themselves. A criticality accident is accompanied by intense neutron and gamma emissions and release of radioactive fission products-gases and aerosols-gene rating risk of irradiation and contamination. This work has supplemented earlier work in criticality safety, which concentrated on critical mass measurements and computations. Understanding of the consequences of criticality accidents was limited. Emergency planning was hampered by lack of data. Information became available from pulsed reactor experiments, but the experiments were restricted to the established reactor configurations. The objectives of research performed at the Valduc criticality laboratory, mainly on aqueous fissile media, using the CRAC and SILENE facilities, by multidisciplinary teams of physicists, dosimetry specialists, and radio-biologists, were to model criticality accident physics, estimate irradiation risks and radioactive releases, detect excursions, and organize emergency response. The results of the Valduc experiments have contributed toward improved understanding of criticality accident phenomenology and better evaluation of the risks associated with such accidents. (authors)

  16. Review of the CRAC and SILENE Criticality Accident Studies

    Energy Technology Data Exchange (ETDEWEB)

    Barbry, F.; Fouillaud, P.; Grivot, P.; Reverdy, L. [CEA Valduc, Serv Rech Neutron and Critcite, 21 - Is-sur-Tille (France)

    2009-02-15

    In 1967, the Commissariat et l'Energie Atomique (French Atomic Energy Agency) performed its first research on criticality accidents for the purpose of limiting their impact on people, the environment, and nuclear facilities themselves. A criticality accident is accompanied by intense neutron and gamma emissions and release of radioactive fission products-gases and aerosols-gene rating risk of irradiation and contamination. This work has supplemented earlier work in criticality safety, which concentrated on critical mass measurements and computations. Understanding of the consequences of criticality accidents was limited. Emergency planning was hampered by lack of data. Information became available from pulsed reactor experiments, but the experiments were restricted to the established reactor configurations. The objectives of research performed at the Valduc criticality laboratory, mainly on aqueous fissile media, using the CRAC and SILENE facilities, by multidisciplinary teams of physicists, dosimetry specialists, and radio-biologists, were to model criticality accident physics, estimate irradiation risks and radioactive releases, detect excursions, and organize emergency response. The results of the Valduc experiments have contributed toward improved understanding of criticality accident phenomenology and better evaluation of the risks associated with such accidents. (authors)

  17. The X Chromosome Is Necessary for Somatic Development in the Dioecious Silene latifolia: Cytogenetic and Molecular Evidence and Sequencing of a Haploid Genome

    Czech Academy of Sciences Publication Activity Database

    Soukupová, Magda; Nevrtalová, Eva; Čížková, Jana; Vogel, Ivan; Čegan, Radim; Hobza, Roman; Vyskot, Boris

    2014-01-01

    Roč. 143, 1-3 (2014), s. 96-103 ISSN 1424-8581 R&D Projects: GA ČR(CZ) GBP501/12/G090; GA ČR(CZ) GAP501/12/2220; GA ČR(CZ) GAP501/10/0102; GA MŠk(CZ) LM2010005; GA MŠk LO1204 Institutional support: RVO:68081707 Keywords : Anther culture * Cytometry * Dihaploids Subject RIV: BO - Biophysics; EF - Botanics (UEB-Q) Impact factor: 1.561, year: 2014

  18. Antimycotic Activity and Genotoxic Evaluation of Citrus sinensis and Citrus latifolia Essential Oils.

    Science.gov (United States)

    Ruiz-Pérez, Nancy J; González-Ávila, Marisela; Sánchez-Navarrete, Jaime; Toscano-Garibay, Julia D; Moreno-Eutimio, Mario A; Sandoval-Hernández, Teresa; Arriaga-Alba, Myriam

    2016-05-03

    The aim of this study was to evaluate the antifungal activity of essential oils (EOs) of Citrus sinensis (C. sinensis) and Citrus latifolia (C. latifolia) against five Candida species: Candida albicans, Candida tropicalis, Candida glabrata, Candida lusitaniae and Candida guilliermondii; and perform its genotoxic evaluation. The EOs of C. sinensis and C. latifolia were obtained from the peel by hydro-distillation. The major components determined by GC-MS were in C. sinensis, d-limonene (96%) and α-myrcene (2.79%); and in C. latifolia, d-limonene (51.64%), β-thujene (14.85%), β-pinene (12.79%) and γ-terpinene (12.8%). Antifungal properties were studied by agar diffusion method, where C. sinensis presented low activity and C. latifolia essential oil was effective to inhibit growing of C. lusitaniae and C. guilliermondii with IC50 of 6.90 and 2.92 μg respectively. The minimum inhibitory concentrations (MIC) for C. sinensis were in a range of 0.42-3.71 μg and for C. latifolia of 0.22-1.30 μg. Genotoxic evaluation was done by Ames test where none of the oils induced point mutations. Flow cytometry was used to measure toxicity in human oral epithelial cells, C. sinensis was not cytotoxic and C. latifolia was toxic at 21.8 μg. These properties might bestow different odontological applications to each essential oil.

  19. Stereospecific synthesis of syn-α-oximinoamides by a three-component reaction of isocyanides, syn-chlorooximes, and carboxylic acids.

    Science.gov (United States)

    Pirali, Tracey; Mossetti, Riccardo; Galli, Simona; Tron, Gian Cesare

    2011-07-15

    A stereospecific multicomponent reaction among isocyanides, syn-chlorooximes, and carboxylic acids provides an efficient synthesis of biologically relevant syn-α-oximinoamides. © 2011 American Chemical Society

  20. Non-coding RNA may be associated with cytoplasmic male sterility in Silene vulgaris

    Czech Academy of Sciences Publication Activity Database

    Stone, James D.; Koloušková, Pavla; Sloan, D.B.; Štorchová, Helena

    2017-01-01

    Roč. 68, č. 7 (2017), s. 1599-1612 ISSN 0022-0957 R&D Projects: GA ČR(CZ) GA16-09220S Institutional support: RVO:61389030 Keywords : Cytoplasmic male sterility * Editing * Mitochondrion * Non-coding RNA * Silene vulgaris * Splicing * Transcriptome Subject RIV: EF - Botanics OBOR OECD: Plant sciences, botany Impact factor: 5.830, year: 2016

  1. Notice of release of Syn1 Tall Fescue

    Science.gov (United States)

    The Agricultural Research Service, U.S. Department of Agriculture announces the release of Syn1 tall fescue [Festuca arundinacea (syn., Lolium arundinaceum Darbyshire; Schedonorus phoenix (Scop.) Holub)] (PI xxxx, PI xxxx) germplasm developed by Dr. Bryan K. Kindiger at the USDA-ARS Grazinglands Res...

  2. Rosebud SynCoal Partnership, SynCoal{reg_sign} demonstration technology update

    Energy Technology Data Exchange (ETDEWEB)

    Sheldon, R.W. [Rosebud SynCoal Partnership, Billings, MT (United States)

    1997-12-31

    An Advanced Coal Conversion Process (ACCP) technology being demonstrated in eastern Montana (USA) at the heart of one of the world`s largest coal deposits is providing evidence that the molecular structure of low-rank coals can be altered successfully to produce a unique product for a variety of utility and industrial applications. The product is called SynCoal{reg_sign} and the process has been developed by the Rosebud SynCoal Partnership (RSCP) through the US Department of Energy`s multi-million dollar Clean Coal Technology Program. The ACCP demonstration process uses low-pressure, superheated gases to process coal in vibrating fluidized beds. Two vibratory fluidized processing stages are used to heat and convert the coal. This is followed by a water spray quench and a vibratory fluidized stage to cool the coal. Pneumatic separators remove the solid impurities from the dried coal. There are three major steps to the SynCoal{reg_sign} process: (1) thermal treatment of the coal in an inert atmosphere, (2) inert gas cooling of the hot coal, and (3) removal of ash minerals. When operated continuously, the demonstration plant produces over 1,000 tons per day (up to 300,000 tons per year) of SynCoal{reg_sign} with a 2% moisture content, approximately 11,800b Btu/lb and less than 1.0 pound of SO{sub 2} per million Btu. This product is obtained from Rosebud Mine sub-bituminous coal which starts with 25% moisture, 8,600 Btu/lb and approximately 1.6 pounds of SO{sub 2} per million Btu.

  3. Species Recognition and Clinical Relevance of the Zygomycetous Genus Lichtheimia (syn. Absidia Pro Parte, Mycocladus)

    NARCIS (Netherlands)

    Alastruey-Izquierdo, A.; Hoffmann, K.; de Hoog, G.S.; Rodriguez-Tudela, J.L.; Voigt, K.; Bibashi, E.; Walther, G.

    2010-01-01

    The zygomycete genus Lichtheimia (syn. Absidia pro parte, Mycocladus) consists of saprotrophic fungi inhabiting soil or dead plant material. Lichtheimia corymbifera (syn. Absidia corymbifera, Mycocladus corymbifer) and Lichtheimia ramosa (syn. Absidia ramosa, Mycocladus ramosus) may cause fulminant

  4. Species recognition and clinical relevance of the zygomycetous genus Lichtheimia (syn. Absidia pro parte, Mycocladus)

    NARCIS (Netherlands)

    Alastruey-Izquierdo, A.; Hoffmann, K.; de Hoog, G.S.; Rodriguez-Tudela, J.L.; Voigt, K.; Bibashi, E.; Walther, G.

    2010-01-01

    The zygomycete genus Lichtheimia (syn. Absidia pro parte, Mycocladus) consists of saprotrophic fungi inhabiting soil or dead plant material. Lichtheimia corymbifera (syn. Absidia corymbifera, Mycocladus corymbifer) and Lichtheimia ramosa (syn. Absidia ramosa, Mycocladus ramosus) may cause fulminant

  5. A new species of Chelonus (Areselonus) (Hymenoptera, Braconidae) from India reared from Acrocercops lysibathra (Meyrick) on Cordia latifolia Roxb.

    OpenAIRE

    Ahmad, Zubair; Ghramh, Hamed A.

    2018-01-01

    Chelonus (Areselonus) spinigaster sp. n., (Hymenoptera: Braconidae: Cheloninae) is described from India. The new species was reared from the moth species Acrocercops lysibathra (Meyr.) on Cordia latifolia Roxb.

  6. A new species of Chelonus (Areselonus) (Hymenoptera, Braconidae) from India reared from Acrocercops lysibathra (Meyrick) on Cordia latifolia Roxb.

    Science.gov (United States)

    Ahmad, Zubair; Ghramh, Hamed A

    2018-01-01

    Chelonus (Areselonus) spinigaster sp. n. , (Hymenoptera: Braconidae: Cheloninae) is described from India. The new species was reared from the moth species Acrocercops lysibathra (Meyr.) on Cordia latifolia Roxb.

  7. Analytical evaluation of dose measurement of critical accident at SILENE (Contract research)

    CERN Document Server

    Nakamura, T; Tonoike, K

    2003-01-01

    Institute for Radioprotection and Nuclear Safety (IRSN) and the OECD Nuclear Energy Agency (NEA) jointly organized SILENE Accident Dosimetry Intercomparison Exercise to intercompare the dose measurement systems of participating countries. Each participating country carried out dose measurements in the same irradiation field, and the measurement results were mutually compared. The participated in the exercise to measure the doses of gamma rays and neutron from SILENE by using thermoluminescence dosimeters (TLD's) and an alanine dosimeter. In this examination, the derived evaluation formulae for obtaining a tissue-absorbed dose from measured value (ambient dose equivalent) of TLD for neutron. We reported the tissue-absorbed dose computed using this evaluation formula to OECD/NEA. TLD's for neutron were irradiated in the TRACY facility to verify the evaluation formulae. The results of TLD's were compared with the calculations of MCNP and measurements with alanine dose meter. We found that the ratio of the dose b...

  8. 2010 Criticality Accident Alarm System Benchmark Experiments At The CEA Valduc SILENE Facility

    International Nuclear Information System (INIS)

    Miller, Thomas Martin; Dunn, Michael E.; Wagner, John C.; McMahan, Kimberly L.; Authier, Nicolas; Jacquet, Xavier; Rousseau, Guillaume; Wolff, Herve; Piot, Jerome; Savanier, Laurence; Baclet, Nathalie; Lee, Yi-kang; Masse, Veronique; Trama, Jean-Christophe; Gagnier, Emmanuel; Naury, Sylvie; Lenain, Richard; Hunter, Richard; Kim, Soon; Dulik, George Michael; Reynolds, Kevin H.

    2011-01-01

    Several experiments were performed at the CEA Valduc SILENE reactor facility, which are intended to be published as evaluated benchmark experiments in the ICSBEP Handbook. These evaluated benchmarks will be useful for the verification and validation of radiation transport codes and evaluated nuclear data, particularly those that are used in the analysis of CAASs. During these experiments SILENE was operated in pulsed mode in order to be representative of a criticality accident, which is rare among shielding benchmarks. Measurements of the neutron flux were made with neutron activation foils and measurements of photon doses were made with TLDs. Also unique to these experiments was the presence of several detectors used in actual CAASs, which allowed for the observation of their behavior during an actual critical pulse. This paper presents the preliminary measurement data currently available from these experiments. Also presented are comparisons of preliminary computational results with Scale and TRIPOLI-4 to the preliminary measurement data.

  9. TRIPOLI calculation of the neutron field in the hall of the SILENE reactor

    International Nuclear Information System (INIS)

    Bourdet, L.

    1986-05-01

    This study concerns the utilization of the experimental reactor SILENE as radiation source. Its aim is to get a theoretical estimation of the neutron field characteristics in different points of the irradiation hall (spectra, fluences, equivalents of biological doses and reaction yields). These estimations are compared to results obtained by several experimental techniques; they allow to know better this neutron field with or without lead shield [fr

  10. Chemical constituents of Cordia latifolia and their nematicidal activity.

    Science.gov (United States)

    Begum, Sabira; Perwaiz, Sobiya; Siddiqui, Bina S; Khan, Shazia; Fayyaz, Shahina; Ramzan, Musarrat

    2011-05-01

    Following nematicidal activity-guided isolation studies on the fruits, bark, and leaves of Cordia latifolia, two new constituents, cordinoic acid (=11-oxours-12-ene-23,28-dioic acid; 1) and cordicilin (=2-{[(E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}-3-[4-hydroxy-3-(stearoyloxy)phenyl]propanoic acid; 2) were isolated from the stem and leaves, respectively, together with nine known compounds, namely cordioic and cordifolic acid from the stem bark, latifolicin A-D and rosmarinic acid from the fruits, and cordinol and cordicinol from the leaves. Their structures were determined by means of spectroscopic analyses including 1D- and 2D-NMR techniques. The nematicidal activities of these constituents were determined against the root-knot nematode Meloidogyne incognita. Hundred percent mortality was caused by all of these after 72 h at a 0.125% concentration. Compound 1 and cordioic acid were most active and caused 100% mortality after 24 h at a 0.50% concentration. Furthermore, compound 2, the ester of rosemarinic acid, was found to be more active than the free acid. Copyright © 2011 Verlag Helvetica Chimica Acta AG, Zürich.

  11. SynLam(TM) Primary Mirror Evaluation, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — Cornerstone Research Group, Inc. (CRG), has developed sandwich core composite material (SynLam(TM)) and related fabrication technology to address the drawbacks of...

  12. Pollinator specialization and pollination syndromes of three related North American Silene.

    Science.gov (United States)

    Reynolds, Richard J; Westbrook, M Jody; Rohde, Alexandra S; Cridland, Julie M; Fenster, Charles B; Dudash, Michele R

    2009-08-01

    Community and biogeographic surveys often conclude that plant-pollinator interactions are highly generalized. Thus, a central implication of the pollination syndrome concept, that floral trait evolution occurs primarily via specialized interactions of plants with their pollinators, has been questioned. However, broad surveys may not distinguish whether flower visitors are actual pollen vectors and hence lack power to assess the relationship between syndrome traits and the pollinators responsible for their evolution. Here we address whether the floral traits of three closely related hermaphroditic Silene spp. native to eastern North America (S. caroliniana, S. virginica, and S. stellata) correspond to predicted specialized pollination based on floral differences among the three species and the congruence of these floral features with recognized pollination syndromes. A nocturnal/diurnal pollinator exclusion experiment demonstrated that all three Silene spp. have diurnal pollinators, and only S. stellata has nocturnal pollinators. Multiyear studies of visitation rates demonstrated that large bees, hummingbirds, and nocturnal moths were the most frequent pollinators of S. caroliniana, S. virginica, and S. stellata, respectively. Estimates of pollen grains deposited and removed per visit generally corroborated the visitation rate results for all three species. However, the relatively infrequent diurnal hawkmoth pollinators of S. caroliniana were equally effective and more efficient than the most frequent large bee visitors. Pollinator importance (visitation X deposition) of each of the animal visitors to each species was estimated and demonstrated that in most years large bees and nocturnal moths were the most important pollinators of S. caroliniana and S. stellata, respectively. By quantifying comprehensive aspects of the pollination process we determined that S. virginica and S. stellata were specialized on hummingbirds and nocturnal moths, respectively, and S

  13. Observations of the ipogean part of Typha Latifolia and Phragmites Australis; Osservazioni sull'apparato ipogeo di Typha Latifolia e Phragmites Australis

    Energy Technology Data Exchange (ETDEWEB)

    Borin, M.; Bonaiti, G. [Padua Univ., Padua (Italy). Dipt. di Agronomia Ambientale e Produzioni Vegetali

    2000-06-01

    Since the interest on the use of wetlands to provide treatment of wastewaters is increasing in Italy, and the role of plants for the high performance of such systems is essential, observations on the ipogean part of Typha latifolia and Phragmites australis have been conducted after one year of growth in cubic containers (0,8 cm each side) filled with loamy textured soil. The length of rhizomes, the rhizomes and roots biomass production, and the TKN immobilisation in rhizomes and roots have been measured in soil layers of 10 cm wide. Typha latifolia and Phragmites australis produced high quantities of biomass (33 and 39 t {center_dot} ha{sup 1} of dry weight respectively) and showed a high immobilisation of nitrogen (270 and 250 kg {center_dot} ha{sup 1} respectively). The hypogeal part of Typha latifolia was developed especially in the first layers, whereas the one of Phragmites australis was more distributed along the soil profile (94 and 69% of the total biomass in the first 30 cm respectively). [Italian] Considerato l'interesse crescente che si sta osservando in Italia per la fitodepurazione delle acque inquinate e vista l'importanza che le piante esercitano in questa tecnologia, si sono condotte delle osservazioni sullo sviluppo dell'apparato ipogeo di Typha latifolia L. e Phragmites australis dopo un anno di accrescimento in cassoni cubici (0,8 m di lato) riempiti con terreno a grana media. Sono stati rilevati, per strati di 10 cm di profondita', la lunghezza dei rizomi, la biomassa di rizomi e radici ed il contenuto di TKN in rizomi e radici. Typha latifolia e Phragmites australis hanno prodotto molta biomassa (33 e 39 t {center_dot} ha{sup 1}di sostanza secca rispettivamente) ed hanno immagazinato una notevole quantita' di azoto (270 e 250 kg {center_dot} ha{sup 1} rispettivamente). Lungo il profilo del terreno, l'apparato ipogeo di Typha latifolia e' risultato piu' concentrato nei primi strati di quanto osservato in

  14. SynUTC - high precision time synchronization over ethernet networks

    CERN Document Server

    Höller, R; Horauer, M; Kerö, N; Schmid, U; Schossmaier, K

    2002-01-01

    This article describes our SynUTC (Synchronized Universal Time Coordinated) technology, which enables high-accuracy distribution of GPS time and time synchronization of network nodes connected via standard Ethernet LANs. By means of exchanging data packets in conjunction with moderate hardware support at nodes and switches, an overall worst-case accuracy in the range of some 100 ns can be achieved, with negligible communication overhead. Our technology thus improves the 1 ms-range accuracy achievable by conventional, software-based approaches like NTP by 4 orders of magnitude. Applications can use the high-accuracy global time provided by SynUTC for event timestamping and event generation both at hardware and software level. SynUTC is based upon inserting highly accurate time information into dedicated data packets at the media-independent interface (MII) between the physical layer transceiver and the network controller upon packet transmission and reception, respectively. As a consequence, every node has acc...

  15. Analysis of Chromosome Number in Some Allium and Silene Wild Species with Ornamental Use

    OpenAIRE

    Lucia DRAGHIA; Elena Liliana CHELARIU; Culiţă SÎRBU; Maria BRÂNZĂ; Cristina SANDU MICULSCHI

    2013-01-01

    The present study analyses the number of somatic chromosomes in plant species with ornamental value, in Romanian indigenous flora, Allium (A. flavum L., A. saxatile Bieb.) and Silene (S. compacta Fischer., S. supina M.Bieb.). The biological material was identified and harvested in the South-Eastern part of Dobrogea (Tulcea and Constanţa counties), area in the South-Eastern part of Romania, situated between the Danube and the Black Sea. Individuals from two populations of Allium flavum and All...

  16. Feasibility of reactivity worth measurements by perturbation method with Caliban and Silene experimental reactors

    Energy Technology Data Exchange (ETDEWEB)

    Casoli, Pierre; Authier, Nicolas [Commissariat a l' Energie Atomique, Centre d' Etudes de Valduc, 21120 Is-Sur-Tille (France)

    2008-07-01

    Reactivity worth measurements of material samples put in the central cavities of nuclear reactors allow to test cross section nuclear databases or to extract information about the critical masses of fissile elements. Such experiments have already been completed on the Caliban and Silene experimental reactors operated by the Criticality and Neutronics Research Laboratory of Valduc (CEA, France) using the perturbation measurement technique. Calculations have been performed to prepare future experiments on new materials, such as light elements, structure materials, fission products or actinides. (authors)

  17. Typha angustifolia L. X T. latifolia L. (T.) (glauca Godr.) in Nederland

    NARCIS (Netherlands)

    Ooststroom, van S.J.; Reichgelt, Th.J.

    1962-01-01

    Typha x glauca Godr., the hybrid of T. angustifolia L. and T. latifolia L. was found in the Netherlands for the first time in 1847 and again in 1946, as appears from the collections in the Rijksherbarium, Leiden. Fig. 1 shows the differences found in the female flowers, the pollen, and the

  18. Interrelationships among light, photosynthesis and nitrogen in the crown of mature Pinus contorta ssp. latifolia

    Science.gov (United States)

    A. W. Schoettle; W. K. Smith

    1999-01-01

    Scaling leaf-level measurements to estimate carbon gain of entire leaf crowns or canopies requires an understanding of the distribution of photosynthetic capacity and corresponding light microenvironments within a crown. We have compared changes in the photosynthetic light response and nitrogen (N) content (per unit leaf area) of Pinus contorta Dougl. ssp. latifolia...

  19. Potential of a polyculture of Arundo donax and Typha latifolia for ...

    African Journals Online (AJOL)

    Arundo donax and Typha latifolia are emergent macrophyte species that commonly reproduce in humid areas during warm months. This study investigated the growth and pollutant removal capacity of these two species planted in polyculture in a vertical flow filter bed for rural wastewater treatment. Plant shoot height was ...

  20. Studies on the chemical constituents of the fruits of Cordia latifolia.

    Science.gov (United States)

    Siddiqui, Bina S; Perwaiz, Sobiya; Begum, Sabira

    2006-02-01

    Four new aromatic compounds have been isolated from the fruits of Cordia latifolia (Boreginaceae) bearing a common basic skeleton but differing in the side chain. Their structures were elucidated using spectrometric methods including 1D- (1H and 13C) and 2D-NMR experiments, (1H, 1H-COSY, NOESY, HMQC and HMBC) and chemical transformations.

  1. Three new constituents, latifolinal, latifolidin and cordicinol, from the fruits and leaves of Cordia latifolia.

    Science.gov (United States)

    Siddiqui, Bina S; Perwaiz, Sobiya; Begum, Sabira; Ali, S Tariq

    2010-01-01

    Isolation and structure elucidation of three new natural constituents are reported. These include a new substituted furfuryl ester of stearic acid, latifolinal (1), and two aromatic compounds, latifolidin (2) and cordicinol (3). Compounds 1 and 2 were obtained from the dried fruits and compound 3 from the leaves of Cordia latifolia.

  2. SILENE and TDT: A code for collision probability calculations in XY geometries

    International Nuclear Information System (INIS)

    Sanchez, R.; Stankovski, Z.

    1993-01-01

    Collision probability methods are routinely used for cell and assembly multigroup transport calculations in core design tasks. Collision probability methods use a specialized tracking routine to compute neutron trajectories within a given geometric object. These trajectories are then used to generate the appropriate collision matrices in as many groups as required. Traditional tracking routines are based on open-quotes globalclose quotes geometric descriptions (such as regular meshes) and are not able to cope with the geometric detail required in actual core calculations. Therefore, users have to modify their geometry in order to match the geometric model accepted by the tracking routine, introducing thus a modeling error whose evaluation requires the use of a open-quotes referenceclose quotes method. Recently, an effort has been made to develop more flexible tracking routines either by directly adopting tracking Monte Carlo techniques or by coding of complicated geometries. Among these, the SILENE and TDT package is being developed at the Commissariat a l' Energie Atomique to provide routine as well as reference calculations in arbitrarily shaped XY geometries. This package combines a direct graphical acquisition system (SILENE) together with a node-based collision probability code for XY geometries (TDT)

  3. Arsenate tolerance in Silene paradoxa does not rely on phytochelatin-dependent sequestration

    International Nuclear Information System (INIS)

    Arnetoli, Miluscia; Vooijs, Riet; Bookum, Wilma ten; Galardi, Francesca; Gonnelli, Cristina; Gabbrielli, Roberto; Schat, Henk; Verkleij, Jos A.C.

    2008-01-01

    Arsenate tolerance, As accumulation and As-induced phytochelatin accumulation were compared in populations of Silene paradoxa, one from a mine site enriched in As, Cu and Zn, the other from an uncontaminated site. The mine population was significantly more arsenate-tolerant. Arsenate uptake and root-to-shoot transport were slightly but significantly higher in the non-mine plants. The difference in uptake was quantitatively insufficient to explain the difference in tolerance between the populations. As accumulation in the roots was similar in both populations, but the mine plants accumulated much less phytochelatins than the non-mine plants. The mean phytochelatin chain length, however, was higher in the mine population, possibly due to a constitutively lower cellular glutathione level. It is argued that the mine plants must possess an arsenic detoxification mechanism other than arsenate reduction and subsequent phytochelatin-based sequestration. This alternative mechanism might explain at least some part of the superior tolerance in the mine plants. - Neither decreased uptake nor phytochelatins seem to play a role in the As tolerance in Silene paradoxa

  4. Analytical evaluation of dose measurement of critical accident at SILENE (Contract research)

    Energy Technology Data Exchange (ETDEWEB)

    Nakamura, Takemi; Tonoike, Kotaro; Miyoshi, Yoshinori [Japan Atomic Energy Research Inst., Tokai, Ibaraki (Japan). Tokai Research Establishment

    2003-03-01

    Institute for Radioprotection and Nuclear Safety (IRSN) and the OECD Nuclear Energy Agency (NEA) jointly organized SILENE Accident Dosimetry Intercomparison Exercise to intercompare the dose measurement systems of participating countries. Each participating country carried out dose measurements in the same irradiation field, and the measurement results were mutually compared. The authors participated in the exercise to measure the doses of gamma rays and neutron from SILENE by using thermoluminescence dosimeters (TLD's) and an alanine dosimeter. In this examination, the authors derived evaluation formulae for obtaining a tissue-absorbed dose from measured value (ambient dose equivalent) of TLD for neutron. We reported the tissue-absorbed dose computed using this evaluation formula to OECD/NEA. TLD's for neutron were irradiated in the TRACY facility to verify the evaluation formulae. The results of TLD's were compared with the calculations of MCNP and measurements with alanine dose meter. We found that the ratio of the dose by the evaluation formula to the measured value by the alanine dosimeter was 0.94 and the formula agreed within 6%. From examination of this TRACY, we can conclude that the value reported to OECD/NEA has equivalent accuracy. (author)

  5. Criticality accident dosimetry systems: an international intercomparison at the SILENE reactor in 2002.

    Science.gov (United States)

    Médioni, R; Asselineau, B; Verrey, B; Trompier, F; Itié, C; Texier, C; Muller, H; Pelcot, G; Clairand, I; Jacquet, X; Pochat, J L

    2004-01-01

    In criticality accident dosimetry and more generally for high dose measurements, special techniques are used to measure separately the gamma ray and neutron components of the dose. To improve these techniques and to check their dosimetry systems (physical and/or biological), a total of 60 laboratories from 29 countries (America, Europe, Asia) participated in an international intercomparaison, which took place in France from 9 to 21 June 2002, at the SILENE reactor in Valduc and at a pure gamma source in Fontenay-aux-Roses. This intercomparison was jointly organised by the IRSN and the CEA with the help of the NEA/OCDE and was partly supported by the European Communities. This paper describes the aim of this intercomparison, the techniques used by the participants and the two radiation sources and their characteristics. The experimental arrangements of the dosemeters for the irradiations in free air or on phantoms are given. Then the dosimetric quantities measured and reported by the participants are summarised, analysed and compared with the reference values. The present paper concerns only the physical dosimetry and essentially experiments performed on the SILENE facility. The results obtained with the biological dosimetry are published in two other papers of this issue.

  6. Thevetia neriifolia Juss. ex Steud Syn. J. peruviava (Pers.) Schum ...

    Indian Academy of Sciences (India)

    Thevetia neriifolia Juss. ex Steud Syn. J. peruviava (Pers.) Schum (English: yellow oleander; Hindi: Pili-. Kaner) of Apocynaceae is a small evergreen ornamental tree with strap-like simple leaves and funnel- shaped yellow flowers. Fruit is large with a single hard-shelled seed. Thevetia trees are largely cultivated in gardens ...

  7. Saraca asoca (Roxb.) de Wilde Syn. Saraca indica L. (English ...

    Indian Academy of Sciences (India)

    Saraca asoca (Roxb.) de Wilde Syn. Saraca indica L. (English: Ashoka; Hindi: Asok) ofCaesalpilliaceae is a medium sized extremely ornamental evergreen tree with numerous spreading and drooping branches, compound leaves and orange-yellow flowers in clusters. Fruits are black, leathery pods with compressed seeds.

  8. Syzygium cumini (L.) Skeels Syn. Eugeniajambolana (Hindi-Jamun ...

    Indian Academy of Sciences (India)

    Syzygium cumini (L.) Skeels Syn. Eugeniajambolana (Hindi-Jamun) of Myrtaceae that grows wild and also cultivated, is an elegant tall tree with lush green leathery leaves and white flowers in clusters. The flowers bear numerous stamens. The edible fruits are globose to oblong often single-seeded berries, which are ...

  9. Structural Design of SynRM Rotor, and the Effect on Power Factor

    DEFF Research Database (Denmark)

    Henriksen, Matthew Lee; Jensen, Bogi Bech; Mijatovic, Nenad

    2015-01-01

    In this paper, structural designs for multiple synchoronous reluctance machine (SynRM) rotor configurations are presented. The rotor flux bridges are increased in thickness until mechanical integrity is achieved, and then the performance of the resulting SynRM is observed. After performing this a...... this analysis for SynRM rotors with different barrier numbers and different flux bridge configurations, this paper concludes with recommendations regarding the mechanical design of SynRM rotors....

  10. One-Pot Catalytic Enantio- and Diastereoselective Syntheses of anti-, syn-cis-Disubstituted, and syn-Vinyl Cyclopropyl Alcohols

    Science.gov (United States)

    Kim, Hun Young; Salvi, Luca; Carroll, Patrick J.; Walsh, Patrick J.

    2009-01-01

    Highly enantio- and diastereoselective methods for the synthesis of a variety of cyclopropyl alcohols are reported. These methods represent the first one-pot approaches to syn-vinyl cyclopropyl alcohols, syn-cis-disubstituted cyclopropyl alcohols, and anti-cyclopropyl alcohols from achiral precursors. The methods begin with enantioselective C–C bond formations promoted by a MIB-based zinc catalyst to generate allylic alkoxide intermediates. The intermediates are then subjected to in situ alkoxide-directed cyclopropanation to provide cyclopropyl alcohols. In the synthesis of vinyl cyclopropyl alcohols, hydroboration of enynes is followed by transmetalation of the resulting dienylborane to zinc to provide dienylzinc reagents. Enantioselective addition to aldehydes generates the requisite dienyl zinc alkoxides, which are then subjected to in situ cyclopropanation to furnish vinyl cyclopropyl alcohols. Cyclopropanation occurs at the double bond allylic to the alkoxide. Using this method, syn-vinylcyclopropyl alcohols are obtained in 65–85% yield, 76–93% ee, and >19:1 dr. To prepare anti-cyclopropanols, enantioselective addition of alkylzinc reagents to conjugated enals provides allylic zinc alkoxides. Because direct cyclopropanation provides syn-cyclopropyl alcohols, the intermediate allylic alkoxides were treated with TMSCl/Et3N to generate intermediate silyl ethers. In situ cyclopropanation of the allylic silyl ether resulted in cyclopropanation to form the anti-cyclopropyl silyl ether. Workup with TBAF affords the anti-cyclopropyl alcohols in one-pot in 60–82% yield, 89–99% ee, and ≥10:1 dr. For the synthesis of cis-disubstituted cyclopropyl alcohols, in situ generated (Z)-vinyl zinc reagents were employed in asymmetric addition to aldehydes to generate (Z)-allylic zinc alkoxides. In situ cyclopropanation provides syn-cis-disubstituted cyclopropyl alcohols in 42–70% yield, 88–97% ee, and >19:1 dr. These one-pot procedures enable the synthesis of a

  11. Porcine synapsin 1: SYN1 gene analysis and functional characterization of the promoter

    DEFF Research Database (Denmark)

    Hedegaard, Claus; Kjaer-Sorensen, Kasper; Madsen, Lone Bruhn

    2013-01-01

    of elements responsible for neuron-specific expression. Expression analysis of SYN1 demonstrated presence of transcript during embryonic development. Analysis of GFP expression in transgenic zebrafish embryos suggests that the pig SYN1 promoter directs expression in neuronal cells. Thus, the SYN1 promoter...

  12. Isolation and characterization of microsatellite markers and analysis of genetic variability in Curculigo latifolia Dryand.

    Science.gov (United States)

    Babaei, Nahid; Abdullah, Nur Ashikin Psyquay; Saleh, Ghizan; Abdullah, Thohirah Lee

    2012-11-01

    Curculin, a sweet protein found in Curculigo latifolia fruit has great potential for the pharmaceutical industry. This protein interestingly has been found to have both sweet taste and taste-modifying capacities comparable with other natural sweeteners. According to our knowledge this is the first reported case on the isolation of microsatellite loci in this genus. Hence, the current development of microsatellite markers for C. latifolia will facilitate future population genetic studies and breeding programs for this valuable plant. In this study 11 microsatellite markers were developed using 3' and 5' ISSR markers. The primers were tested on 27 accessions from all states of Peninsular Malaysia. The number of alleles per locus ranged from three to seven, with allele size ranging from 141 to 306 bp. The observed and expected heterozygosity ranged between 0.00-0.65 and 0.38-0.79, respectively. The polymorphic information content ranged from 0.35 to 0.74 and the Shannon's information index ranged from 0.82 to 1.57. These developed polymorphic microsatellites were used for constructing a dendrogram by unweighted pair group method with arithmetic mean cluster analysis using the Dice's similarity coefficient. Accessions association according to their geographical origin was observed. Based on characteristics of isolated microsatellites for C. latifolia accessions all genotype can be distinguished using these 11 microsatellite markers. These polymorphic markers could also be applied to studies on uniformity determination and somaclonal variation of tissue culture plantlets, varieties identification, genetic diversity, analysis of phylogenetic relationship, genetic linkage maps and quantitative trait loci in C. latifolia.

  13. High Pb concentration stress on Typha latifolia growth and Pb removal in microcosm wetlands.

    Science.gov (United States)

    Han, Jianqiu; Chen, Fengzhen; Zhou, Yumei; Wang, Chaohua

    2015-01-01

    When constructed wetlands are used to treat high-Pb wastewater, Pb may become a stress to wetland plants, which subsequently reduces treatment performance and the other ecosystem services. To facilitate the design and operation of constructed wetlands for treatment of Pb-rich wastewater, we investigated the irreversible inhibitory level of Pb for Typha latifolia through experiments in microcosm wetlands. Seven horizontal subsurface flow constructed wetlands were built with rectangular plastic tanks and packed with marble chips and sand. All wetlands were transplanted with nine stems of Typha latifolia each. The wetlands were batch operated in a greenhouse with artificial wastewater (10 L each) for 12 days. Influent to the seven wetlands had different concentrations of Pb: 0 mg/L, 10 mg/L, 25 mg/L, 50 mg/L, 100 mg/L, 200 mg/L, and 500 mg/L, respectively. The results suggested that leaf chlorophyll relative content, relative growth rate, photosynthetic characteristics, activities of superoxide dismutase, peroxidase, and content of malondialdehyde were not affected when initial Pb concentration was at 100 mg/L and below. But when initial Pb concentration was above 100 mg/L, all of them were seriously affected. We conclude that high Pb concentrations wastewater could inhibit the growth of Typha latifolia and decrease the removal rate of wetlands.

  14. Genetic variation of inbreeding depression among floral and fitness traits in Silene nutans

    DEFF Research Database (Denmark)

    Thiele, Jan; Hansen, Thomas Møller; Siegismund, Hans Redlef

    2010-01-01

    The magnitude and variation of inbreeding depression (ID) within populations is important for the evolution and maintenance of mixed mating systems. We studied ID and its genetic variation in a range of floral and fitness traits in a small and large population of the perennial herb Silene nutans......, using controlled pollinations in a fully factorial North Carolina II design. Floral traits and early fitness traits, that is seed mass and germination rate, were not much affected by inbreeding (delta0.4). Lack of genetic correlations indicated that ID in floral, early and late traits is genetically...... was statistically significant in most floral and all seed traits, but not in late fitness traits. However, some paternal families had delta...

  15. Molecular characterisation of four double-flowered mutants of Silene dioica representing four centuries of variation

    Science.gov (United States)

    Ingle, Elizabeth K. S.; Gilmartin, Philip M.

    2015-01-01

    Records of double-flowered Silene dioica date from the late sixteenth century and four named varieties are grown today, as previously, for their horticultural interest. Although double-flowered mutants have been characterized in several plants, their study in dioecious species is of particular interest due to influences of the homeotic mutation on the different floral whorl configurations in males and females. We have analysed four double-flowered varieties of Silene dioica: Flore Pleno and Rosea Plena date back to the seventeenth and nineteenth centuries, Thelma Kay and Firefly were recognized in the latter part of the twentieth and early twenty-first centuries. We have analysed the floral structure of the four varieties, which have distinct floral architectures. Based on Y chromosome-specific PCR analysis we show that Firefly is male and that the other three varieties are female: Random Amplification of Polymorphic DNA (RAPD) analyses suggested a common origin for the three female varieties. The double-flowered phenotype in all four varieties is caused by mutation of the C-function MADS-box transcription factor gene SDM1. We show that Firefly carries a unique 44bp insertion into SDM1, revealing an independent origin for this variety. Comparative analysis of SDM1 cDNA and genomic sequences in Flore Pleno, Rosea Plena and Thelma Kay shows that all three are caused by the same 7bp insertion within SDM1 and therefore share a common origin. The three alleles also differ by several single nucleotide polymorphisms, which represent somatic mutations accumulated over four centuries of asexual propagation. PMID:25878355

  16. Comparative mapping of the wild perennial Glycine latifolia and soybean (G. max reveals extensive chromosome rearrangements in the genus Glycine.

    Directory of Open Access Journals (Sweden)

    Sungyul Chang

    Full Text Available Soybean (Glycine max L. Mer., like many cultivated crops, has a relatively narrow genetic base and lacks diversity for some economically important traits. Glycine latifolia (Benth. Newell & Hymowitz, one of the 26 perennial wild Glycine species related to soybean in the subgenus Glycine Willd., shows high levels of resistance to multiple soybean pathogens and pests including Alfalfa mosaic virus, Heterodera glycines Ichinohe and Sclerotinia sclerotiorum (Lib. de Bary. However, limited information is available on the genomes of these perennial Glycine species. To generate molecular resources for gene mapping and identification, high-density linkage maps were constructed for G. latifolia using single nucleotide polymorphism (SNP markers generated by genotyping by sequencing and evaluated in an F2 population and confirmed in an F5 population. In each population, greater than 2,300 SNP markers were selected for analysis and segregated to form 20 large linkage groups. Marker orders were similar in the F2 and F5 populations. The relationships between G. latifolia linkage groups and G. max and common bean (Phaseolus vulgaris L. chromosomes were examined by aligning SNP-containing sequences from G. latifolia to the genome sequences of G. max and P. vulgaris. Twelve of the 20 G. latifolia linkage groups were nearly collinear with G. max chromosomes. The remaining eight G. latifolia linkage groups appeared to be products of multiple interchromosomal translocations relative to G. max. Large syntenic blocks also were observed between G. latifolia and P. vulgaris. These experiments are the first to compare genome organizations among annual and perennial Glycine species and common bean. The development of molecular resources for species closely related to G. max provides information into the evolution of genomes within the genus Glycine and tools to identify genes within perennial wild relatives of cultivated soybean that could be beneficial to soybean

  17. Comparative high-throughput transcriptome sequencing and development of SiESTa, the Silene EST annotation database

    Directory of Open Access Journals (Sweden)

    Marais Gabriel AB

    2011-07-01

    Full Text Available Abstract Background The genus Silene is widely used as a model system for addressing ecological and evolutionary questions in plants, but advances in using the genus as a model system are impeded by the lack of available resources for studying its genome. Massively parallel sequencing cDNA has recently developed into an efficient method for characterizing the transcriptomes of non-model organisms, generating massive amounts of data that enable the study of multiple species in a comparative framework. The sequences generated provide an excellent resource for identifying expressed genes, characterizing functional variation and developing molecular markers, thereby laying the foundations for future studies on gene sequence and gene expression divergence. Here, we report the results of a comparative transcriptome sequencing study of eight individuals representing four Silene and one Dianthus species as outgroup. All sequences and annotations have been deposited in a newly developed and publicly available database called SiESTa, the Silene EST annotation database. Results A total of 1,041,122 EST reads were generated in two runs on a Roche GS-FLX 454 pyrosequencing platform. EST reads were analyzed separately for all eight individuals sequenced and were assembled into contigs using TGICL. These were annotated with results from BLASTX searches and Gene Ontology (GO terms, and thousands of single-nucleotide polymorphisms (SNPs were characterized. Unassembled reads were kept as singletons and together with the contigs contributed to the unigenes characterized in each individual. The high quality of unigenes is evidenced by the proportion (49% that have significant hits in similarity searches with the A. thaliana proteome. The SiESTa database is accessible at http://www.siesta.ethz.ch. Conclusion The sequence collections established in the present study provide an important genomic resource for four Silene and one Dianthus species and will help to

  18. Comparative high-throughput transcriptome sequencing and development of SiESTa, the Silene EST annotation database

    Science.gov (United States)

    2011-01-01

    Background The genus Silene is widely used as a model system for addressing ecological and evolutionary questions in plants, but advances in using the genus as a model system are impeded by the lack of available resources for studying its genome. Massively parallel sequencing cDNA has recently developed into an efficient method for characterizing the transcriptomes of non-model organisms, generating massive amounts of data that enable the study of multiple species in a comparative framework. The sequences generated provide an excellent resource for identifying expressed genes, characterizing functional variation and developing molecular markers, thereby laying the foundations for future studies on gene sequence and gene expression divergence. Here, we report the results of a comparative transcriptome sequencing study of eight individuals representing four Silene and one Dianthus species as outgroup. All sequences and annotations have been deposited in a newly developed and publicly available database called SiESTa, the Silene EST annotation database. Results A total of 1,041,122 EST reads were generated in two runs on a Roche GS-FLX 454 pyrosequencing platform. EST reads were analyzed separately for all eight individuals sequenced and were assembled into contigs using TGICL. These were annotated with results from BLASTX searches and Gene Ontology (GO) terms, and thousands of single-nucleotide polymorphisms (SNPs) were characterized. Unassembled reads were kept as singletons and together with the contigs contributed to the unigenes characterized in each individual. The high quality of unigenes is evidenced by the proportion (49%) that have significant hits in similarity searches with the A. thaliana proteome. The SiESTa database is accessible at http://www.siesta.ethz.ch. Conclusion The sequence collections established in the present study provide an important genomic resource for four Silene and one Dianthus species and will help to further develop Silene as a

  19. Methylenedioxy- and methoxyflavones from Melicope coodeana syn. Euodia simplex

    DEFF Research Database (Denmark)

    Simonsen, Henrik Toft; Larsen, Michael D; Nielsen, Merete W

    2002-01-01

    Three new natural products, 3,8-dimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone, 3,6,8-trimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone and 3,6,8,3',4'-pentamethoxy-5,7-dihydroxyflavone were isolated from Melicope coodeana syn. Euodia simplex (Rutaceae) along with 3,6,3'-trimethoxy-5......,7,4'-trihydroxyflavone and 3,3'-dimethoxy-5,7,4'-trihydroxyflavone. The structural assignments are based on (1)H and (13)C NMR data, including discussion of the chemical shifts of C-2 in 3,5-dihydroxy- and 3-methoxy-5-hydroxyflavones. The presence of highly methoxylated and methylenedioxyflavones is characteristic...

  20. Bioactive screening and in vitro antioxidant assessment of Nauclea latifolia leaf decoction

    Science.gov (United States)

    Iheagwam, Franklyn Nonso; Nsedu, Emmanuel Israel; Kayode, Kazeem Oyindamola; Emiloju, Opeyemi Christianah; Ogunlana, Olubanke Olujoke; Chinedu, Shalom Nwodo

    2018-04-01

    The phytochemical constituents and antioxidant properties of Nauclea latifolia leaf decoction were investigated. Dried leaves were extracted in ethanol. Qualitative and quantitative phytochemical analysis was determined spectrometrically. The antioxidant activities were examined in vitro using 2,2-diphenyl-1-picrylhydrazyl radical, total antioxidant capacity and ferric reducing antioxidant power assays. Phytochemical screening confirmed the presence of flavonoids, alkaloids, anthocyanins, betacyanins, phenols, saponins, terpenoids, cardiac glycosides and quinones. The total lycopene, β-carotene, phenolics, flavonoid and alkaloid content were found to be 0.038 ± 0.01 mg CAE/g, 0.120 ± 0.04 mg CAE/g, 58.08 ± 0.58 mg GAE/g, 10.75 ± 0.17 mg RE/g and 0.32 ± 0.08% respectively. N. latifolia ethanol leaf extract demonstrated effective antioxidant activity against 2,2-diphenyl-1-picrylhydrazyl with an IC50 of 2.58 ± 0.08 mg/mL compared to 0.86 ± 0.02 mg/mL and < 0.01 ± 0.01 mg/mL for butylated hydroxytoluene and ascorbic acid respectively. Total antioxidant capacity and ferric reducing antioxidant power of the extract were 73.81 ± 2.27 and 1314.45 ± 197.64 mg AAE/g respectively. Excellent positive correlations between the phenolic content and antioxidant activities of the extract were observed. The leaf of N. latifolia is of therapeutic value and may be exploited for its rich antioxidant components.

  1. Lavandula angustifolia and Lavandula latifolia Essential Oils from Spain: Aromatic Profile and Bioactivities.

    Science.gov (United States)

    Carrasco, Alejandro; Martinez-Gutierrez, Ramiro; Tomas, Virginia; Tudela, Jose

    2016-01-01

    Compositions of true lavender (Lavandula angustifolia) and spike lavender (Lavandula latifolia) essential oils, cultivated and extracted in the Southeast of Spain, were determined by gas chromatography coupled with mass spectrometry detection, obtaining both relative (peak area) and absolute (using standard curves) concentrations. Linalool (37-54 %), linalyl acetate (21-36 %) and (E)-β-caryophyllene (1-3 %) were the most abundant components for L. angustifolia. Linalool (35-51 %), eucalyptol (26-32 %), camphor (10-18 %), α-pinene (1-2 %), α-terpineol (1-2 %) and α-bisabolene (1-2 %) were the most abundant components for L. latifolia. The characterization was completed with enantioselective gas chromatography, in which the determined main molecules were (-)-linalool, (-)-linalyl acetate and (+)-camphor. (S)-(-)-camphene, (R)-(+)-limonene, (1R, 9S)-(-)-(E)-β-caryophyllene and (1R, 4R, 6R, 10S)-(-)-caryophyllene oxide were found in this study as the predominant enantiomers in Spanish L. angustifolia. The characterised essential oils were tested for their antioxidant activity against free radicals ABTS, DPPH, ORAC, chelating, and reducing power. Inhibitory activity on lipoxygenase was observed indicating a possible anti-inflammatory activity, mainly due to linalool, camphor, p-cymene and limonene. These results can be the starting point for a future study of the potential use of L. angustifolia and L. latifolia essential oils as natural cosmetic and natural pharmaceutical ingredients for several skin diseases. Georg Thieme Verlag KG Stuttgart · New York.

  2. Effect of pre-treatments on the germination of jasmin box (Phillyrea latifolia) seeds in Greece

    OpenAIRE

    Spyroglou, Gavriil; Radoglou, Kalliopi

    2017-01-01

    The major problem in seedlings production of jasmin box (Phillyrea latifolia) is the poor and irregular germination due to seed dormancy. The objective of the present study was to evaluate methods of seed pre-treatments to increase germination. The effect of different solutions of KOH and NaOH, wood ash lye, GA3 and cold or warm stratification on germination were evaluated. Sets of four replicates of 25 seeds were soaked for 24 hours in KOH and NaOH solutions of 0.2, 0.5, 1 and 2 %, in wood a...

  3. Night life on the beach: selfing to avoid pollinator competition between two sympatric Silene species.

    Science.gov (United States)

    Buide, M Luisa; del Valle, José Carlos; Pissatto, Mônica; Narbona, Eduardo

    2015-08-01

    Evolution of autonomous selfing may be advantageous because it allows for reproductive assurance. In co-flowering plants competing for pollinators, the least common and/or attractive could suffer pollen limitations. Silene niceensis and S. ramosissima are taxonomically related species sharing the same habitat, although S. ramosissima is less abundant and has a more restricted distribution. They also have the same a priori nocturnal pollinator syndrome, and show an overlapping flowering phenology. The aim of this study was to investigate whether a selfing strategy in S. ramosissima allows it to avoid pollinator competition and/or interspecific pollen transfer with S. niceensis, which would thus enable both species to reach high levels of fruit and seed set. The breeding system, petal colour, flower life span and degree of overlap between male and female phases, floral visitor abundance and visitation rates were analysed in two sympatric populations of S. niceensis and S. ramosissima in southern Spain. Autonomous selfing in S. ramosissima produced very high fruit and seed set, which was also similar to open-pollinated plants. Silene niceensis showed minimum levels of autonomous selfing, and pollen/ovule ratios were within the range expected for the breeding system. In contrast to S. niceensis, flower life span was much shorter in S. ramosissima, and male and female organs completely overlapped in space and time. Upper surface petals of both species showed differing brightness, chroma and hue. Flowers of S. niceensis were actively visited by moths, hawkmoths and syrphids, whereas those of S. ramosissima were almost never visited. The findings show that different breeding strategies exist between the sympatric co-flowering S. niceensis and S. ramosissima, the former specializing in crepuscular-nocturnal pollination and the latter mainly based on autonomous selfing. These two strategies allow both species to share the restricted dune habitat in which they exist, with a

  4. Biological dosimetry after criticality accidents. Intercomparison exercise in the Silene Reactor - France; Dosimetria biologica en accidentes de criticidad. Ejercicio de intercomparacion en el Reactor Silene - Francia

    Energy Technology Data Exchange (ETDEWEB)

    Di Giorgio, Marina; Vallerga, Maria B; Taja, Maria R [Autoridad Regulatoria Nuclear, Buenos Aires (Argentina); arn gov ar, E-mail: mdigiorg@cae

    2004-07-01

    The Institute of Radiation Protection and Nuclear Safety Institute (IRSN) organized an international biological dosimetry intercomparison, at the SILENE experimental reactor (Valduc, France), simulating different criticality scenarios: bare source 4 Gy, lead shield source 1 and 2 Gy and gamma pure {sup 60}Co source 2 Gy. Fifteen laboratories were involved in this exercise, including the Argentine Biological Dosimetry Laboratory. The purposes of the intercomparison were: 1) To compare the unstable chromosome aberration (UCA) frequency observed by the different laboratories; and 2) To compare the dose estimation for gamma rays and neutrons. The objects of the present work were: I) To compare the mean frequency of UCA observed by the Argentine laboratory with the mean frequency observed by the participant laboratories as a whole. II) To compare the dose estimates performed by the Argentine lab with those estimated by the other laboratories involved in the second stage of the intercomparison. Overall, the mean frequencies of UCA and the correspondent 95% confidence limits obtained by the Argentine lab were consistent with the results obtained by the laboratories as a whole. For the gamma pure scenario, smaller variations were observed among laboratories in terms of dose (CV=18,2%) than in terms of frequency (CV=30,1%). For the mixed field scenarios, only four laboratories, including the Argentine lab, estimated gamma and neutron components of the total dose and just two (Argentine lab and lab 12) were in agreement with the given physical doses. The 1 Gy experiment presented lesser variations both in terms of frequency and dose than the other two scenarios. For the 4 and 2 Gy experiments, variations in neutron dose were more significant than variations in gamma dose, related to the magnitude of the dose. The results suggest that intercomparison exercises jointly with the accreditation of biological dosimetry by cytogenetic service laboratories, in compliance with ISO

  5. Mosaic origins of a complex chimeric mitochondrial gene in Silene vulgaris.

    Directory of Open Access Journals (Sweden)

    Helena Storchova

    Full Text Available Chimeric genes are significant sources of evolutionary innovation that are normally created when portions of two or more protein coding regions fuse to form a new open reading frame. In plant mitochondria astonishingly high numbers of different novel chimeric genes have been reported, where they are generated through processes of rearrangement and recombination. Nonetheless, because most studies do not find or report nucleotide variation within the same chimeric gene, evolution after the origination of these chimeric genes remains unstudied. Here we identify two alleles of a complex chimera in Silene vulgaris that are divergent in nucleotide sequence, genomic position relative to other mitochondrial genes, and expression patterns. Structural patterns suggest a history partially influenced by gene conversion between the chimeric gene and functional copies of subunit 1 of the mitochondrial ATP synthase gene (atp1. We identified small repeat structures within the chimeras that are likely recombination sites allowing generation of the chimera. These results establish the potential for chimeric gene divergence in different plant mitochondrial lineages within the same species. This result contrasts with the absence of diversity within mitochondrial chimeras found in crop species.

  6. Transgenerational plasticity in Silene vulgaris in response to three types of stress.

    Science.gov (United States)

    Sandner, T M; van Braak, J L; Matthies, D

    2018-03-23

    The environment experienced by plants can influence the phenotype of their offspring. Such transgenerational plasticity can be adaptive when it results in higher fitness of the offspring under conditions correlated with those experienced by the mother plant. However, it has rarely been tested if such anticipatory parental effects may be induced with different environments. We grew clonal replicates of Silene vulgaris under control conditions and three types of stress (nutrient deficiency, copper addition and drought), which are known from natural populations of the species. We then subjected offspring from differently treated mother plants to each of the different stress treatments to analyse the influence of maternal and offspring environment on performance and several functional traits. Current stress treatments strongly influenced biomass and functional traits of the plants, mostly in line with responses predicted by the theory of functional equilibrium. Plant performance was also influenced by maternal stress treatments, and some effects independent of initial size differences remained until harvest. In particular, stressed mothers produced offspring of higher fitness than control plants. However, there was no evidence for treatment-specific adaptive transgenerational plasticity, as offspring from a mother plant that had grown in a specific environment did not grow better in that environment than other plants. Our results indicate that the maternal environment may affect offspring traits and performance, but also that this transgenerational plasticity is not necessarily adaptive. © 2018 German Society for Plant Sciences and The Royal Botanical Society of the Netherlands.

  7. A taxonomic revision of the southern African native and naturalized species of Silene L. (Caryophyllaceae

    Directory of Open Access Journals (Sweden)

    J. C. Manning

    2012-12-01

    Full Text Available The native and naturalized species of Silene L. in southern Africa are reviewed, with full synonomy and the description of two new species from the West Coast of Western Cape. Eight native species and three naturalized species are recognized, including the first identification in southern Africa of the Mediterranean S. nocturna L. The identity of S. aethiopica Burm., which has remained unknown since its description, is established and is found to be the oldest name for S. clandestina Jacq. Patterns of morphological variation within each species are discussed and subspecies are recognized for geographically segregated groups of populations that are ± morphologically diagnosable. The following new names or combinations are made among the southern African taxa: S. aethiopica subsp. longiflora; S. burchellii subsp. modesta, subsp. multiflora, and subsp. pilosellifolia; S. crassifolia subsp. primuliflora; S. saldanhensis; S. rigens; and S. undulata subsp. polyantha. Each taxon is described, with information on ecology and distribution, and most species are illustrated, including SEM micrographs of the seeds.

  8. Paradoxical effects of density on measurement of copper tolerance in Silene paradoxa L.

    Science.gov (United States)

    Capuana, Maurizio; Colzi, Ilaria; Buccianti, Antonella; Coppi, Andrea; Palm, Emily; Del Bubba, Massimo; Gonnelli, Cristina

    2018-01-01

    This work investigated if the assessment of tolerance to trace metals can depend on plant density in the experimental design. A non-metallicolous and a metallicolous populations of Silene paradoxa were hydroponically cultivated at increasing density and in both the absence (-Cu conditions) and excess of copper (+Cu conditions). In -Cu conditions, the metallicolous population showed a lower susceptibility to plant density in comparison to the non-metallicolous one, explained by a higher capacity of the metallicolous population to exploit resources. In +Cu conditions, an alleviating effect of increasing density was found in roots. Such effect was present to a greater extent in the non-metallicolous population, thus making the populations equally copper-tolerant at the highest density used. In shoots, an additive effect of increasing plant density to copper toxicity was reported. Its higher intensity in the metallicolous population reverted the copper tolerance relationship at the highest plant densities used. In both populations, a density-induced decrease in root copper accumulation was observed, thus concurring to the reported mitigation in +Cu conditions. Our work revealed the importance of density studies on the optimization of eco-toxicological bioassays and of metal tolerance assessment and it can be considered the first example of an alleviating effect of increasing plant number on copper stress in a metallophyte.

  9. Point and interval estimation of pollinator importance: a study using pollination data of Silene caroliniana.

    Science.gov (United States)

    Reynolds, Richard J; Fenster, Charles B

    2008-05-01

    Pollinator importance, the product of visitation rate and pollinator effectiveness, is a descriptive parameter of the ecology and evolution of plant-pollinator interactions. Naturally, sources of its variation should be investigated, but the SE of pollinator importance has never been properly reported. Here, a Monte Carlo simulation study and a result from mathematical statistics on the variance of the product of two random variables are used to estimate the mean and confidence limits of pollinator importance for three visitor species of the wildflower, Silene caroliniana. Both methods provided similar estimates of mean pollinator importance and its interval if the sample size of the visitation and effectiveness datasets were comparatively large. These approaches allowed us to determine that bumblebee importance was significantly greater than clearwing hawkmoth, which was significantly greater than beefly. The methods could be used to statistically quantify temporal and spatial variation in pollinator importance of particular visitor species. The approaches may be extended for estimating the variance of more than two random variables. However, unless the distribution function of the resulting statistic is known, the simulation approach is preferable for calculating the parameter's confidence limits.

  10. EVALUACIÓN DE PANELES AISLANTES FABRICADOS EN FIBRAS DE TOTORA (TYPHA LATIFOLIA

    Directory of Open Access Journals (Sweden)

    Velasco, L.

    2015-12-01

    Full Text Available En el presente trabajo se evaluó la capacidad aislante de paneles elaborados a base de la Typha Latifolia en diferentes formas. Los resultados muestran una capacidad aislante relevante, catalogando la totora como un elemento de potencial aplicación como aislamiento en edificaciones. El desarrollo de aislantes térmicos basados en residuos de biomasa es una línea de investigación prometedora que permitirá la mejora sustancial de la eficiencia energética, así como el confort térmico del hábitat con soluciones sustentables de bajo coste. El desarrollo de elementos constructivos contemporáneos como paneles o mantas de totora, permitirá la mejora de la sustentabilidad de soluciones industriales, así como la reducción importante del coste de producción de estas. In this paper the insulating capacity of panels made of Typha latifolia in different forms was evaluated. The results show a significant insulating capacity, placing the cattail as a potential isolating element in buildings. The development of thermal insulation elements based on biomass residues is a promising line of research that will provide substantial improvement in energy efficiency and thermal comfort with sustainable habitat solutions at low cost. The development of contemporary construction elements such as panels or blankets of totora, will permit the improvement of industrial solutions sustainability and a significant reduction in the cost of its production.

  11. Radical Scavenging Capacity of Methanolic Phillyrea latifolia L. Extract: Anthocyanin and Phenolic Acids Composition of Fruits

    Directory of Open Access Journals (Sweden)

    Naciye Erkan

    2013-01-01

    Full Text Available Radical scavenging capacity of a crude methanolic extract from the fruits of Phillyrea latifolia L., commonly known as green olive tree or mock privet, was investigated with reference to anthocyanin standards, as flavonoids, and phenolic acid standards, as phenylpropanoids. Characterization with high performance liquid chromatography-diode array detection (HPLC-DAD indicated the presence of keracyanin, kuromanin, cyanidin, ferulic acid, caffeic acid and rosmarinic acid at amounts of 289.1, 90.4, 191.4, 225.2, 221.2 and 190.1 mg/100 g fresh weight (FW of fruits, respectively. Chlorogenic and p-coumaric acids were found to exist in lower amounts. Trolox equivalent antioxidant capacity (TEAC and IC50 values of the plant extract were found to be 1.8 mM Trolox equivalents (TE/g FW of fruits and 69.4 µg/mL, respectively, indicating the close radical scavenging activity of the extract to those of keracyanin and p-coumaric acid. The crude methanolic P. latifolia L. fruit extract was seen to be fairly potent in radical scavenging. Total phenolic content (TPC of the plant extract was found to be 1652.9 mg gallic acid equivalent (GAE/100 g FW of fruits.

  12. A new anthraquinone and a new naphthoquinone from the whole plant of Spermacoce latifolia.

    Science.gov (United States)

    Luo, Ying; Shen, Hai-Yan; Shen, Qing-Xiang; Cao, Zhao-Hui; Zhang, Min; Long, Shi-Yin; Wang, Zong-Bao; Tan, Jian-Wen

    2017-09-01

    A phytochemical study on the whole plant of Spermacoce latifolia led to the isolation of a new anthraquinone, 1,2,6-trihydroxy-5-methoxy-9,10-anthraquinone (1), and a new naphthoquinone, (2R)-6-hydroxy-7-methoxy-dehydroiso-α-lapachone (2), together with three known anthraquinones (3-5). Their structures were established on the basis of detailed spectroscopic analysis, including one- and two-dimensional NMR, ESI-MS, and HR-ESI-MS techniques. All the compounds were isolated from S. latifolia for the first time. Compounds 1, 2, 4, and 5 showed significant antibacterial activity toward Bacillus subtilis with MIC values ranging from 0.9 to 31.2 μg/ml, and compound 4 aslo exhibited antibacterial activity against Bacillus cereus with a MIC value 62.5 μg/ml. Compound 1 was further revealed to show significant in vitro α-glucosidase inhibitory activity with IC 50 value of 0.653 mM.

  13. Heat stability of proteins in desiccation tolerant cattail pollen (Typha latifolia): A Fourier transform infrared spectroscopic study.

    NARCIS (Netherlands)

    Wolkers, W.F.; Hoekstra, F.A.

    1997-01-01

    Secondary structure and aggregation behavior of proteins, as determined in situ in Typha latifolia pollen, were studied by means of Fourier transform infrared microspectroscopy. The amide-I band, arising from the peptide backbone, was recorded over a temperature range from -50 to 120°C at different

  14. GENETIC DIVERSITY OF TYPHA LATIFOLIA (TYPHACEAE) AND THE IMPACT OF POLLUTANTS EXAMINED WITH TANDEM-REPETITIVE DNA PROBES

    Science.gov (United States)

    Genetic diversity at variable-number-tandem-repeat (VNTR) loci was examined in the common cattail, Typha latifolia (Typhaceae), using three synthetic DNA probes composed of tandemly repeated "core" sequences (GACA, GATA, and GCAC). The principal objectives of this investigation w...

  15. Manganese Silylene Hydride Complexes: Synthesis and Reactivity with Ethylene to Afford Silene Hydride Complexes.

    Science.gov (United States)

    Price, Jeffrey S; Emslie, David J H; Britten, James F

    2017-05-22

    Reaction of the ethylene hydride complex trans-[(dmpe) 2 MnH(C 2 H 4 )] (1) with Et 2 SiH 2 at 20 °C afforded the silylene hydride [(dmpe) 2 MnH(=SiEt 2 )] (2 a) as the trans-isomer. By contrast, reaction of 1 with Ph 2 SiH 2 at 60 °C afforded [(dmpe) 2 MnH(=SiPh 2 )] (2 b) as a mixture of the cis (major) and trans (minor) isomers, featuring a Mn-H-Si interaction in the former. The reaction to form 2 b also yielded [(dmpe) 2 MnH 2 (SiHPh 2 )] (3 b); [(dmpe) 2 MnH 2 (SiHR 2 )] (R=Et (3 a) and Ph (3 b)) were accessed cleanly by reaction of 2 a and 2 b with H 2 , and the analogous reactions with D 2 afforded [(dmpe) 2 MnD 2 (SiHR 2 )] exclusively. Both 2 a and 2 b engaged in unique reactivity with ethylene, generating the silene hydride complexes cis-[(dmpe) 2 MnH(R 2 Si=CHMe)] (R=Et (4 a), Ph (4 b)). Compounds trans-2 a, cis-2 b, 3 b, and 4 b were crystallographically characterized, and bonding in 2 a, 2 b, 4 a, and 4 b was probed computationally. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  16. Transcriptome and biochemical analysis of a flower color polymorphism in Silene littorea (Caryophyllaceae

    Directory of Open Access Journals (Sweden)

    Inés eCasimiro-Soriguer

    2016-02-01

    Full Text Available Flower color polymorphisms are widely used as model traits from genetics to ecology, yet determining the biochemical and molecular basis can be challenging. Anthocyanin-based flower color variations can be caused by at least 12 structural and three regulatory genes in the anthocyanin biosynthetic pathway. We use mRNA-Seq to simultaneously sequence and estimate expression of these candidate genes in nine samples of Silene littorea representing three color morphs (dark pink, light pink and white across three developmental stages in hopes of identifying the cause of flower color variation. We identified 29 putative paralogues for the 15 candidate genes in the anthocyanin biosynthetic pathway. We assembled complete coding sequences for 16 structural loci and nine of ten regulatory loci. Among these 29 putative paralogues, we identified 622 SNPs, yet only nine synonymous SNPs in Ans had allele frequencies that differentiated pigmented petals (dark pink and light pink from white petals. These Ans allele frequency differences were further investigated with an expanded sequencing survey of 38 individuals, yet no SNPs consistently differentiated the color morphs. We also found one locus, F3h1, with strong differential expression between pigmented and white samples (>42x. This may be caused by decreased expression of Myb1a in white petal buds. Myb1a in S. littorea is a regulatory locus closely related to Subgroup 7 Mybs known to regulate F3h and other loci in the first half of the ABP in model species. We then compare the mRNA-Seq results with petal biochemistry which revealed cyanidin as the primary anthocyanin and five flavonoid intermediates. Concentrations of three of the flavonoid intermediates were significantly lower in white petals than in pigmented petals (rutin, quercetin and isovitexin. The biochemistry results for rutin, quercetin, luteolin and apigenin are consistent with the transcriptome results suggesting a blockage at F3h, possibly caused

  17. Effect of Copper on Fatty-Acid Composition and Peroxidation of Lipids in the Roots of Copper Tolerant and Sensitive Silene-Cucubalus.

    NARCIS (Netherlands)

    De Vos, C.H.R.; TenBookum, W.M.; Vooijs, R.; Schat, H.; De Kok, L.J.

    1993-01-01

    The effect of high copper exposure in vivo on the lipid and fatty acid composition and lipid peroxidation was studied in the roots of plants from one copper sensitive and two copper tolerant genotypes of Silene cucubalus. At 0.5 muM Cu (control treatment) the compositions of lipids and fatty acids

  18. The 2″-O-glucosylation of vitexin and isovitexin in petals of Silene alba is catalysed by two different enzymes

    NARCIS (Netherlands)

    Heinsbroek, R.; Brederode, J. van; Nigtevecht, G. van; Maas, J.; Kamsteeg, J.; Besson, E.; Chopin, J.

    1980-01-01

    Two separate genes, Fg and Vg, which govern the presence of isovitexin 2″-O-glucoside and vitexin 2″-O-glucoside respectively in the petals of Silene alba control different glucosyltransferases. In Vg/Vg,fg/fg plants no isovitexin 2″-O-glucosyltransferase was present and in vg/vg,Fg/Fg plants no

  19. Anatomy and Histochemistry of Roots and Shoots in Wild Rice (Zizania latifolia Griseb.

    Directory of Open Access Journals (Sweden)

    Chaodong Yang

    2014-01-01

    Full Text Available Wild rice (Zizania latifolia Griseb. is a famous, perennial, emergent vegetable in China. The current work explores the anatomy and histochemistry of roots, stems, and leaves and the permeability of apoplastic barriers of wild rice. The adventitious roots in wild rice have suberized and lignified endodermis and adjacent, thick-walled cortical layers and suberized and lignified hypodermis, composed of a uniseriate sclerenchyma layer (SC underlying uniseriate exodermis; they also have lysigenous aerenchyma. Stems have a thickened epidermal cuticle, a narrow peripheral mechanical ring (PMR, an outer ring of vascular bundles, and an inner ring of vascular bundles embedded in a multiseriate sclerenchyma ring (SCR. There is evidence of suberin in stem SCR and PMR sclerenchyma cells. Sheathing leaves are characterized by thick cuticles and fibrous bundle sheath extensions. Air spaces in stems and leaves consist of mostly lysigenous aerenchyma and pith cavities in stems. Apoplastic barriers are found in roots and stems.

  20. SynGAP regulates protein synthesis and homeostatic synaptic plasticity in developing cortical networks.

    Directory of Open Access Journals (Sweden)

    Chih-Chieh Wang

    Full Text Available Disrupting the balance between excitatory and inhibitory neurotransmission in the developing brain has been causally linked with intellectual disability (ID and autism spectrum disorders (ASD. Excitatory synapse strength is regulated in the central nervous system by controlling the number of postsynaptic α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors (AMPARs. De novo genetic mutations of the synaptic GTPase-activating protein (SynGAP are associated with ID and ASD. SynGAP is enriched at excitatory synapses and genetic suppression of SynGAP increases excitatory synaptic strength. However, exactly how SynGAP acts to maintain synaptic AMPAR content is unclear. We show here that SynGAP limits excitatory synaptic strength, in part, by suppressing protein synthesis in cortical neurons. The data presented here from in vitro, rat and mouse cortical networks, demonstrate that regulation of translation by SynGAP involves ERK, mTOR, and the small GTP-binding protein Rheb. Furthermore, these data show that GluN2B-containing NMDARs and the cognitive kinase CaMKII act upstream of SynGAP and that this signaling cascade is required for proper translation-dependent homeostatic synaptic plasticity of excitatory synapses in developing cortical networks.

  1. By-product of Lavandula latifolia essential oil distillation as source of antioxidants.

    Science.gov (United States)

    Méndez-Tovar, Inés; Herrero, Baudilio; Pérez-Magariño, Silvia; Pereira, José Alberto; Asensio-S-Manzanera, M Carmen

    2015-06-01

    The objective of this work was to evaluate the antioxidant properties of Lavandula latifolia waste obtained after essential oil distillation. Samples of 12 wild populations of the Lavandula genus collected between 2009 and 2010 were hydrodistilled and their by-products were analyzed using the Folin-Ciocalteu, free radical scavenging activity (2,2-diphenyl-1-picrylhydrazyl), and the ferric reducing antioxidant power (FRAP) methods. Rosmarinic acid, apigenin, and luteolin contents were analyzed by high-performance liquid chromatography-diode array detection. The mean of total phenolic content ranged from 1.89 ± 0.09 mg gallic acid equivalents/g dry weight to 3.54 ± 0.22 mg gallic acid equivalents/g dry weight. The average value of the half maximal effective concentration (EC 50 ) for scavenging activity ranged from 5.09 ± 0.17 mg/mL to 14.30 ± 1.90 mg/mL and the variability of the EC 50 in FRAP ranged from 3.72 ± 0.12 mg/mL to 18.55 ± 0.77 mg/mL. Annual variation was found among this samples and the environmental conditions of 2009 were found to be more favorable. The plants collected from Sedano showed the highest antioxidant power. Our results show that rosmarinic acid and apigenin in L. latifolia contributed to the antioxidant properties of the waste. In conclusion, the by-product of the distillation industry could be valorizing as a source of natural antioxidants. Copyright © 2014. Published by Elsevier B.V.

  2. By-product of Lavandula latifolia essential oil distillation as source of antioxidants

    Directory of Open Access Journals (Sweden)

    Inés Méndez-Tovar

    2015-06-01

    Full Text Available The objective of this work was to evaluate the antioxidant properties of Lavandula latifolia waste obtained after essential oil distillation. Samples of 12 wild populations of the Lavandula genus collected between 2009 and 2010 were hydrodistilled and their by-products were analyzed using the Folin–Ciocalteu, free radical scavenging activity (2,2-diphenyl-1-picrylhydrazyl, and the ferric reducing antioxidant power (FRAP methods. Rosmarinic acid, apigenin, and luteolin contents were analyzed by high-performance liquid chromatography–diode array detection. The mean of total phenolic content ranged from 1.89 ± 0.09 mg gallic acid equivalents/g dry weight to 3.54 ± 0.22 mg gallic acid equivalents/g dry weight. The average value of the half maximal effective concentration (EC50 for scavenging activity ranged from 5.09 ± 0.17 mg/mL to 14.30 ± 1.90 mg/mL and the variability of the EC50 in FRAP ranged from 3.72 ± 0.12 mg/mL to 18.55 ± 0.77 mg/mL. Annual variation was found among this samples and the environmental conditions of 2009 were found to be more favorable. The plants collected from Sedano showed the highest antioxidant power. Our results show that rosmarinic acid and apigenin in L. latifolia contributed to the antioxidant properties of the waste. In conclusion, the by-product of the distillation industry could be valorizing as a source of natural antioxidants.

  3. Detailed adsorption mechanism of plasmid DNA by newly isolated cellulose from waste flower spikes of Thypa latifolia using quantum chemical calculations.

    Science.gov (United States)

    Mujtaba, Muhammad; Kaya, Murat; Akyuz, Lalehan; Erdonmez, Demet; Akyuz, Bahar; Sargin, Idris

    2017-09-01

    Current study was designed to use the newly obtained cellulose from waste flower spikes of Thypa latifolia plant for plasmid DNA adsorption. Cellulose was isolated according to a previously described method including acid and base treatment, and cellulose content was recorded as 17%. T. latifolia cellulose was physicochemically characterized via FT-IR, TGA and SEM techniques. Detailed mechanism of plasmid DNA adsorption by newly isolated cellulose was described using chemical quantum calculations. To check the effect of Cu ++ immobilization on the affinity of cellulose for plasmid DNA, copper ions were immobilized onto T. latifolia cellulose. pUC18 plasmid DNA was used for adsorption studies. Membranes prepared with only T. latifolia cellulose and Cu ++ immobilized T. latifolia cellulose revealed different adsorption ratios as 43.9 and 86.9% respectively. This newly isolated cellulose from waste flower spikes of T. latifolia can be utilized as a suitable carrier for plasmid DNA. Copyright © 2017 Elsevier B.V. All rights reserved.

  4. xSyn: A Software Tool for Identifying Sophisticated 3-Way Interactions From Cancer Expression Data

    Directory of Open Access Journals (Sweden)

    Baishali Bandyopadhyay

    2017-08-01

    Full Text Available Background: Constructing gene co-expression networks from cancer expression data is important for investigating the genetic mechanisms underlying cancer. However, correlation coefficients or linear regression models are not able to model sophisticated relationships among gene expression profiles. Here, we address the 3-way interaction that 2 genes’ expression levels are clustered in different space locations under the control of a third gene’s expression levels. Results: We present xSyn, a software tool for identifying such 3-way interactions from cancer gene expression data based on an optimization procedure involving the usage of UPGMA (Unweighted Pair Group Method with Arithmetic Mean and synergy. The effectiveness is demonstrated by application to 2 real gene expression data sets. Conclusions: xSyn is a useful tool for decoding the complex relationships among gene expression profiles. xSyn is available at http://www.bdxconsult.com/xSyn.html .

  5. MaxSynBio - Avenues towards creating cells from the bottom up.

    Science.gov (United States)

    Schwille, Petra; Spatz, Joachim; Landfester, Katharina; Bodenschatz, Eberhard; Herminghaus, Stephan; Sourjik, Victor; Erb, Tobias; Bastiaens, Philippe; Lipowsky, Reinhard; Hyman, Anthony; Dabrock, Peter; Baret, Jean-Christophe; Vidakovic-Koch, Tanja; Bieling, Peter; Dimova, Rumiana; Mutschler, Hannes; Robinson, Tom; Tang, Dora; Wegner, Seraphine; Sundmacher, Kai

    2018-05-11

    A large Max Planck-based German research consortium ('MaxSynBio') was formed to investigate living systems from a fundamental perspective. The research program of MaxSynBio relies solely on the bottom-up approach to Synthetic Biology. MaxSynBio focuses on the detailed analysis and understanding of essential processes of life, via their modular reconstitution in minimal synthetic systems. The ultimate goal is to construct a basic living unit entirely from non-living components. The fundamental insights gained from the activities in MaxSynBio can eventually be utilized for establishing a new generation of biotechnological processes, which would be based on synthetic cell constructs that replace natural cells currently used in conventional biotechnology. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  6. Biological dosimetry after criticality accidents. Intercomparison exercise in the Silene Reactor - France

    International Nuclear Information System (INIS)

    Di Giorgio, Marina; Vallerga, Maria B.; Taja, Maria R.

    2004-01-01

    The Institute of Radiation Protection and Nuclear Safety Institute (IRSN) organized an international biological dosimetry intercomparison, at the SILENE experimental reactor (Valduc, France), simulating different criticality scenarios: bare source 4 Gy, lead shield source 1 and 2 Gy and gamma pure 60 Co source 2 Gy. Fifteen laboratories were involved in this exercise, including the Argentine Biological Dosimetry Laboratory. The purposes of the intercomparison were: 1) To compare the unstable chromosome aberration (UCA) frequency observed by the different laboratories; and 2) To compare the dose estimation for gamma rays and neutrons. The objects of the present work were: I) To compare the mean frequency of UCA observed by the Argentine laboratory with the mean frequency observed by the participant laboratories as a whole. II) To compare the dose estimates performed by the Argentine lab with those estimated by the other laboratories involved in the second stage of the intercomparison. Overall, the mean frequencies of UCA and the correspondent 95% confidence limits obtained by the Argentine lab were consistent with the results obtained by the laboratories as a whole. For the gamma pure scenario, smaller variations were observed among laboratories in terms of dose (CV=18,2%) than in terms of frequency (CV=30,1%). For the mixed field scenarios, only four laboratories, including the Argentine lab, estimated gamma and neutron components of the total dose and just two (Argentine lab and lab 12) were in agreement with the given physical doses. The 1 Gy experiment presented lesser variations both in terms of frequency and dose than the other two scenarios. For the 4 and 2 Gy experiments, variations in neutron dose were more significant than variations in gamma dose, related to the magnitude of the dose. The results suggest that intercomparison exercises jointly with the accreditation of biological dosimetry by cytogenetic service laboratories, in compliance with ISO

  7. Comportamiento de las exportaciones de limón persa (Citrus latifolia tanaka) al mercado de los Estados Unidos

    OpenAIRE

    Arias, Francisco; Suarez, Ernesto

    2017-01-01

    This paper aims to analyze the behavior of Persian lemon, also known as Tahiti lemon (Citrus latifolia Tanaka),exports to the United States market, which stands out as the main market worldwide, during 2011-2015. Materials and methods. Multiple databases were used, as well as the compilation of reports applicable to the citrus chain obtained from secondary sources for the three countries analyzed and interviews with experts from Mexico, Guatemala and Colombia. Ex...

  8. Deep functional analysis of synII, a 770 kb synthetic yeast chromosome

    OpenAIRE

    Shen, Yue; Wang, Yun; Chen, Tai; Gao, Feng; Gong, Jianhui; Abramczyk, Dariusz; Walker, Roy; Zhao, Hongcui; Chen, Shihong; Liu, Wei; Luo, Yisha; Müller, Carolin A.; Paul-Dubois-Taine, Adrien; Alver, Bonnie; Stracquadanio, Giovanni

    2017-01-01

    Herein we report the successful design, construction and characterization of a 770 kb synthetic yeast chromosome II (synII). Our study incorporates characterization at multiple levels, including phenomics, transcriptomics, proteomics, chromosome segregation and replication analysis to provide a thorough and comprehensive analysis of a synthetic chromosome. Our “Trans-Omics” analyses reveal a modest but potentially significant pervasive up-regulation of translational machinery observed in synI...

  9. Ultrastructural morphologic description of the wild rice species Oryza latifolia (Poaceae in Costa Rica

    Directory of Open Access Journals (Sweden)

    Ethel Sánchez

    2003-06-01

    Full Text Available The wild rice species Oryza latifolia is endemic to Tropical America, allotetraploid and has a CCDD genome type. It belongs to the officinalis group of the genus Oryza. This species is widely distributed through-out the lowlands of Costa Rica and it is found on different life zones, having great morphologic diversity. The purpose of this research is to perform a morphologic description of O. latifolia samples of three Costa Rican localities (Carara, Liberia and Cañas and to see if the phenotypic diversity of the species is reflected at the ultra-structure level. Structures such as the leaf blade, ligule, auricles and spikelet were analyzed. Leaf blade morphology of the specimens from the three localities is characterized by the presence of diamond-shaped stomata with papillae, zipper-like rows of silica cells; a variety of evenly distributed epicuticular wax papillae and bulky prickle trichomes. The central vein of the leaf blade from the Cañas populations is glabrous, while those from Carara and Liberia have abundant papillae. There are also differences among the borders of the leaf blade between these locations. Cañas and Liberia present alternating large and small prickle trichomes ca. 81 and 150 µm, while Carara exhibits even sized prickle trichomes of ca. 93 µm. Auricles from Cañas are rectangular and present long trichomes along the surface ca. 1.5 mm, while those of Liberia and Carara wrap the culm and exhibit trichomes only in the borders. The ligule from the plants of Carara has an acute distal tip, while that of Cañas and Liberia is blunt. The Liberia spikelet has large lignified spines while Cañas and Carara show flexible trichomes.La especie silvestre Oryza latifolia es endémica de América, tetraploide y de genoma CCDD. Pertenece a las especies del género Oryza del grupo officinalis. Presenta una amplia distribución en las tierras bajas de Costa Rica y se le encuentra en varias zonas de vida, mostrando una gran diversidad

  10. Phragmites australis + Typha latifolia Community Enhanced the Enrichment of Nitrogen and Phosphorus in the Soil of Qin Lake Wetland

    Directory of Open Access Journals (Sweden)

    Zhiwei Ge

    2017-01-01

    Full Text Available Aquatic plants play an essential role and are effective in mitigating lake eutrophication by forming complex plant-soil system and retaining total nitrogen (TN and phosphorus (TP in soils to ultimately reduce their quantities in aquatic systems. Two main vegetation types (Phragmites australis community and P. australis + Typha latifolia community of Qin Lake wetland were sampled in this study for the analysis of TN and TP contents and reserves in the wetland soils. The results showed that (1 the consumption effect of Qin Lake wetland on soluble N was much more significant than on soluble P. (2 The efficiency of TN enrichment in wetland soil was enhanced by vegetation covering of P. australis and T. latifolia. (3 Wetland soil P was consumed by P. australis community and this pattern was relieved with the introduction of T. latifolia. (4 According to the grey relativity analysis, the most intensive interaction between plants and soil occurred in summer. In addition, the exchange of N in soil-vegetation system primarily occurred in the 0–15 cm soil layer. Our results indicated that vegetation covering was essential to the enrichment of TN and TP, referring to the biology-related fixation in the wetland soil.

  11. Participation of IRD/CNEN-Br in International Intercomparison of Criticality Accident Dosimetry Systems at Silene reactor, France

    International Nuclear Information System (INIS)

    Mauricio, Claudia Lucia P.; Fonseca, Evaldo S. da

    1996-01-01

    IRD has participated in an International Intercomparison of Criticality Accident Dosimetry Systems at the SILENE reactor, France on June 1993. The dosemeters were irradiated on phantoms and free in air, in bare and lead shield reactor pulses, simulating different irradiation fields that can be found in criticality accidents. Comparing with the reference measurements, the calculated mean neutron kerma found by IRD was only 2% greater for lead shield and 14% greater for bare reactor. For gamma absorbed dose, the differences were, respectively + 22% and -9% for the dosemeters free in air and -19% and -9% for dosemeters on phantoms. IRD results are closer to the real values than the mean values measured by the participants. IRD results show a good performance if its simple criticality accident system. (author)

  12. Under fungal attack on a metalliferous soil: ROS or not ROS? Insights from Silene paradoxa L. growing under copper stress

    International Nuclear Information System (INIS)

    Taiti, Cosimo; Giorni, Elisabetta; Colzi, Ilaria; Pignattelli, Sara; Bazihizina, Nadia; Buccianti, Antonella; Luti, Simone; Pazzagli, Luigia; Mancuso, Stefano; Gonnelli, Cristina

    2016-01-01

    We investigated how the adaptation to metalliferous environments can influence the plant response to biotic stress. In a metallicolous and a non-metallicolous population of Silene paradoxa the induction of oxidative stress and the production of callose and volatiles were evaluated in the presence of copper and of the PAMP fungal protein cerato-platanin, separately and in combination. Our results showed incompatibility between the ordinary ROS-mediated response to fungal attack and the acquired mechanisms of preventing oxidative stress in the tolerant population. A similar situation was also demonstrated by the sensitive population growing in the presence of copper but, in this case, with a lack of certain responses, such as callose production. In addition, in terms of the joint behaviour of emitted volatiles, multivariate statistics showed that not only did the populations respond differently to the presence of copper or biotic stress, but also that the biotic and abiotic stresses interacted in different ways in the two populations. Our results demonstrated that the same incompatibility of hyperaccumulators in ROS-mediated biotic stress signals also seemed to be exhibited by the excluder metallophyte, but without the advantage of being able to rely on the elemental defence for plant protection from natural enemies. - Highlights: • Silene paradoxa plants from metalliferous and nonmetalliferous soil were studied. • Plants were exposed to Cerato-platanin in presence/absence of Cu in culture media. • ROS response was fully present in nonmetallicolous plants only in the absence of Cu. • Similar ROS response in metallicolous plants with or without Cu. - The adaptation to high concentrations of copper was found to interfere with the ordinary ROS-mediated response to fungal attack in an excluder metallophyte.

  13. Enhancement of β-Glucan Content in the Cultivation of Cauliflower Mushroom (Sparassis latifolia) by Elicitation.

    Science.gov (United States)

    Park, Hyun; Ka, Kang-Hyeon; Ryu, Sung-Ryul

    2014-03-01

    The effectiveness of three kinds of enzymes (chitinase, β-glucuronidase, and lysing enzyme complex), employed as elicitors to enhance the β-glucan content in the sawdust-based cultivation of cauliflower mushroom (Sparassis latifolia), was examined. The elicitors were applied to the cauliflower mushroom after primordium formation, by spraying the enzyme solutions at three different levels on the sawdust-based medium. Mycelial growth was fully accomplished by the treatments, but the metabolic process during the growth of fruiting bodies was affected. The application of a lysing enzyme resulted in an increase in the β-glucan concentration by up to 31% compared to that of the control. However, the treatment resulted in a decrease in mushroom yield, which necessitated the need to evaluate its economic efficiency. Although we still need to develop a more efficient way for using elicitors to enhance functional metabolites in mushroom cultivation, the results indicate that the elicitation technique can be applied in the cultivation of medicinal/edible mushrooms.

  14. Nutrients removal by Typha latifolia and Cynodon spp. grown in constructed wetlands

    Directory of Open Access Journals (Sweden)

    Mateus Pimentel de Matos

    2011-04-01

    Full Text Available The objective of this study was to evaluate the extraction capacity of two species when grown in constructed wetlands with subsurface horizontal flow (SACs for the treatment of swine wastewater (ARS. To this end, were built 8 SACs of 2.0 m x 0.5 m x 0.6 m, fiber glass, filled with 0.55 m of fine gravels. In SAC2; SAC4; SAC6 and SAC8 was cultivated cattail (Typha latifolia and in SAC3; SAC5; SAC7 and SAC9 was cultivated tifton-85 bermudagrass (Cynodon spp.. The SAC2 and SAC3, SAC4 and SAC5, SAC6 and SAC7 and SAC8 and SAC9 received 163, 327, 461 and 561 kg ha-1 day-1 of BOD, respectively. During the 120 days of the SACs monitoring, it was found that the cattail has not adapted to the conditions of exposure. The highest yields were obtained with the application of organic load average of 327 kg ha-1 day-1 of BOD. The tifton-85 was the plant species with the highest capacity to extract nutrients, getting to draw between 443 and 540, 86 and 99, 193 and 241, 0.77 and 2.17, and 1.21 and 3.68 kg ha-1 TKN, P, K, Cu and Zn, respectively, while cattail showed greater capacity to absorb sodium.

  15. Uptake and metabolism of diclofenac in Typha latifolia--how plants cope with human pharmaceutical pollution.

    Science.gov (United States)

    Bartha, Bernadett; Huber, Christian; Schröder, Peter

    2014-10-01

    The fate of pharmaceuticals in our environment is a very important issue for environmental and health research. Although these substances have been detected in environmental compartments in low concentration until now, they will pose considerable environmental risk to ecosystems, animals and human due to their biological activity. Alternative plant based removal technologies that make use of some potential wetland species like Phragmites or Typha within traditional wastewater treatment plants have to be established to cope with this "new generation" of pollutants. We investigated uptake and translocation of diclofenac (1mgl(-1)) in the macrophyte Typha latifolia L. during one week exposure in greenhouse experiments. Detoxification products and involved key enzymatic processes were identified. We also examined the oxidative stress induced by the treatment and the defense capacity of the plants. Rapid uptake and effective metabolism were observed, where glycoside and glutathione conjugates represent dominant metabolites. Up to seven-fold induction of glycosyltransferase activity was observed in roots, but not in shoots. Glutathione S-transferase activity was also induced, but to a lower extent. The activity changes of defense enzymes points to oxidative stress in the plants. Our results show that human pharmaceuticals can be metabolized by plants similar to xenobiotics, but that similarities to human metabolism are limited. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

  16. Rooting and acclimatization of micropropagated marubakaido apple rootstock using Adesmia latifolia rhizobia.

    Science.gov (United States)

    Muniz, Aleksander Westphal; de Sá, Enilson Luiz; Dalagnol, Gilberto Luíz; Filho, João Américo

    2013-01-01

    In vitro rooting and the acclimatization of micropropagated rootstocks of apple trees is essential for plant development in the field. The aim of this work was to assess the use of rhizobia of Adesmia latifolia to promote rooting and acclimatization in micropropagated Marubakaido apple rootstock. An experiment involving in vitro rooting and acclimatization was performed with four strains of rhizobium and two controls, one with and the other without the addition of synthetic indoleacetic acid. The inoculated treatments involved the use of sterile inoculum and inoculum containing live rhizobia. The most significant effects on the rooting rate, primary-root length, number of roots, root length, fresh-shoot biomass, and fresh-root biomass were obtained by inoculation with strain EEL16010B and with synthetic indole acetic acid. However, there was no difference in the growth of apple explants in the acclimatization experiments. Strain EEL16010B can be used to induce in vitro rooting of the Marubakaido rootstock and can replace the use of synthetic indoleacetic acid in the rooting of this cultivar.

  17. Antidiabetic and Hypolipidemic Activities of Curculigo latifolia Fruit:Root Extract in High Fat Fed Diet and Low Dose STZ Induced Diabetic Rats

    Directory of Open Access Journals (Sweden)

    Nur Akmal Ishak

    2013-01-01

    Full Text Available Curculigo latifolia fruit is used as alternative sweetener while root is used as alternative treatment for diuretic and urinary problems. The antidiabetic and hypolipidemic activities of C. latifolia fruit:root aqueous extract in high fat diet (HFD and 40 mg streptozotocin (STZ induced diabetic rats through expression of genes involved in glucose and lipid metabolisms were investigated. Diabetic rats were treated with C. latifolia fruit:root extract for 4 weeks. Plasma glucose, insulin, adiponectin, lipid profiles, alanine aminotransferase (ALT, gamma glutamyltransferase (GGT, urea, and creatinine levels were measured before and after treatments. Regulations of selected genes involved in glucose and lipid metabolisms were determined. Results showed the significant (P<0.05 increase in body weight, high density lipoprotein (HDL, insulin, and adiponectin levels and decreased glucose, total cholesterol (TC, triglycerides (TG, low density lipoprotein (LDL, urea, creatinine, ALT, and GGT levels in diabetic rats after 4 weeks treatment. Furthermore, C. latifolia fruit:root extract significantly increased the expression of IRS-1, IGF-1, GLUT4, PPARα, PPARγ, AdipoR1, AdipoR2, leptin, LPL, and lipase genes in adipose and muscle tissues in diabetic rats. These results suggest that C. latifolia fruit:root extract exerts antidiabetic and hypolipidemic effects through altering regulation genes in glucose and lipid metabolisms in diabetic rats.

  18. Two Silene vulgaris copper transporters residing in different cellular compartments confer copper hypertolerance by distinct mechanisms when expressed in Arabidopsis thaliana.

    Science.gov (United States)

    Li, Yanbang; Iqbal, Mazhar; Zhang, Qianqian; Spelt, Cornelis; Bliek, Mattijs; Hakvoort, Henk W J; Quattrocchio, Francesca M; Koes, Ronald; Schat, Henk

    2017-08-01

    Silene vulgaris is a metallophyte of calamine, cupriferous and serpentine soils all over Europe. Its metallicolous populations are hypertolerant to zinc (Zn), cadmium (Cd), copper (Cu) or nickel (Ni), compared with conspecific nonmetallicolous populations. These hypertolerances are metal-specific, but the underlying mechanisms are poorly understood. We investigated the role of HMA5 copper transporters in Cu-hypertolerance of a S. vulgaris copper mine population. Cu-hypertolerance in Silene is correlated and genetically linked with enhanced expression of two HMA5 paralogs, SvHMA5I and SvHMA5II, each of which increases Cu tolerance when expressed in Arabidopsis thaliana. Most Spermatophytes, except Brassicaceae, possess homologs of SvHMA5I and SvHMA5II, which originate from an ancient duplication predating the appearance of spermatophytes. SvHMA5II and the A. thaliana homolog AtHMA5 localize in the endoplasmic reticulum and upon Cu exposure move to the plasma membrane, from where they are internalized and degraded in the vacuole. This resembles trafficking of mammalian homologs and is apparently an extremely ancient mechanism. SvHMA5I, instead, neofunctionalized and always resides on the tonoplast, likely sequestering Cu in the vacuole. Adaption of Silene to a Cu-polluted soil is at least in part due to upregulation of two distinct HMA5 transporters, which contribute to Cu hypertolerance by distinct mechanisms. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  19. SYN3D: a single-channel, spatial flux synthesis code for diffusion theory calculations

    Energy Technology Data Exchange (ETDEWEB)

    Adams, C. H.

    1976-07-01

    This report is a user's manual for SYN3D, a computer code which uses single-channel, spatial flux synthesis to calculate approximate solutions to two- and three-dimensional, finite-difference, multigroup neutron diffusion theory equations. SYN3D is designed to run in conjunction with any one of several one- and two-dimensional, finite-difference codes (required to generate the synthesis expansion functions) currently being used in the fast reactor community. The report describes the theory and equations, the use of the code, and the implementation on the IBM 370/195 and CDC 7600 of the version of SYN3D available through the Argonne Code Center.

  20. Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome.

    Science.gov (United States)

    Shen, Yue; Wang, Yun; Chen, Tai; Gao, Feng; Gong, Jianhui; Abramczyk, Dariusz; Walker, Roy; Zhao, Hongcui; Chen, Shihong; Liu, Wei; Luo, Yisha; Müller, Carolin A; Paul-Dubois-Taine, Adrien; Alver, Bonnie; Stracquadanio, Giovanni; Mitchell, Leslie A; Luo, Zhouqing; Fan, Yanqun; Zhou, Baojin; Wen, Bo; Tan, Fengji; Wang, Yujia; Zi, Jin; Xie, Zexiong; Li, Bingzhi; Yang, Kun; Richardson, Sarah M; Jiang, Hui; French, Christopher E; Nieduszynski, Conrad A; Koszul, Romain; Marston, Adele L; Yuan, Yingjin; Wang, Jian; Bader, Joel S; Dai, Junbiao; Boeke, Jef D; Xu, Xun; Cai, Yizhi; Yang, Huanming

    2017-03-10

    Here, we report the successful design, construction, and characterization of a 770-kilobase synthetic yeast chromosome II (synII). Our study incorporates characterization at multiple levels-including phenomics, transcriptomics, proteomics, chromosome segregation, and replication analysis-to provide a thorough and comprehensive analysis of a synthetic chromosome. Our Trans-Omics analyses reveal a modest but potentially relevant pervasive up-regulation of translational machinery observed in synII, mainly caused by the deletion of 13 transfer RNAs. By both complementation assays and SCRaMbLE (synthetic chromosome rearrangement and modification by loxP -mediated evolution), we targeted and debugged the origin of a growth defect at 37°C in glycerol medium, which is related to misregulation of the high-osmolarity glycerol response. Despite the subtle differences, the synII strain shows highly consistent biological processes comparable to the native strain. Copyright © 2017, American Association for the Advancement of Science.

  1. SYN3D: a single-channel, spatial flux synthesis code for diffusion theory calculations

    International Nuclear Information System (INIS)

    Adams, C.H.

    1976-07-01

    This report is a user's manual for SYN3D, a computer code which uses single-channel, spatial flux synthesis to calculate approximate solutions to two- and three-dimensional, finite-difference, multigroup neutron diffusion theory equations. SYN3D is designed to run in conjunction with any one of several one- and two-dimensional, finite-difference codes (required to generate the synthesis expansion functions) currently being used in the fast reactor community. The report describes the theory and equations, the use of the code, and the implementation on the IBM 370/195 and CDC 7600 of the version of SYN3D available through the Argonne Code Center

  2. Deep functional analysis of synII, a 770 kb synthetic yeast chromosome

    Science.gov (United States)

    Gao, Feng; Gong, Jianhui; Abramczyk, Dariusz; Walker, Roy; Zhao, Hongcui; Chen, Shihong; Liu, Wei; Luo, Yisha; Müller, Carolin A.; Paul-Dubois-Taine, Adrien; Alver, Bonnie; Stracquadanio, Giovanni; Mitchell, Leslie A.; Luo, Zhouqing; Fan, Yanqun; Zhou, Baojin; Wen, Bo; Tan, Fengji; Wang, Yujia; Zi, Jin; Xie, Zexiong; Li, Bingzhi; Yang, Kun; Richardson, Sarah M.; Jiang, Hui; French, Christopher E.; Nieduszynski, Conrad A.; Koszul, Romain; Marston, Adele L.; Yuan, Yingjin; Wang, Jian; Bader, Joel S.; Dai, Junbiao; Boeke, Jef D.; Xu, Xun; Cai, Yizhi; Yang, Huanming

    2017-01-01

    Herein we report the successful design, construction and characterization of a 770 kb synthetic yeast chromosome II (synII). Our study incorporates characterization at multiple levels, including phenomics, transcriptomics, proteomics, chromosome segregation and replication analysis to provide a thorough and comprehensive analysis of a synthetic chromosome. Our “Trans-Omics” analyses reveal a modest but potentially significant pervasive up-regulation of translational machinery observed in synII is mainly caused by the deletion of 13 tRNAs. By both complementation assays and SCRaMbLE, we targeted and debuged the origin of a growth defect at 37°C in glycerol medium, which is related to misregulation of the HOG response. Despite the subtle differences, the synII strain shows highly consistent biological processes comparable to the native strain. PMID:28280153

  3. BrisSynBio: a BBSRC/EPSRC-funded Synthetic Biology Research Centre.

    Science.gov (United States)

    Sedgley, Kathleen R; Race, Paul R; Woolfson, Derek N

    2016-06-15

    BrisSynBio is the Bristol-based Biotechnology and Biological Sciences Research Council (BBSRC)/Engineering and Physical Sciences Research Council (EPSRC)-funded Synthetic Biology Research Centre. It is one of six such Centres in the U.K. BrisSynBio's emphasis is on rational and predictive bimolecular modelling, design and engineering in the context of synthetic biology. It trains the next generation of synthetic biologists in these approaches, to facilitate translation of fundamental synthetic biology research to industry and the clinic, and to do this within an innovative and responsible research framework. © 2016 The Author(s).

  4. Detecting SYN flood attacks via statistical monitoring charts: A comparative study

    KAUST Repository

    Bouyeddou, Benamar

    2017-12-14

    Accurate detection of cyber-attacks plays a central role in safeguarding computer networks and information systems. This paper addresses the problem of detecting SYN flood attacks, which are the most popular Denial of Service (DoS) attacks. Here, we compare the detection capacity of three commonly monitoring charts namely, a Shewhart chart, a Cumulative Sum (CUSUM) control chart and exponentially weighted moving average (EWMA) chart, in detecting SYN flood attacks. The comparison study is conducted using the publicly available benchmark datasets: the 1999 DARPA Intrusion Detection Evaluation Datasets.

  5. Lawsonia inermis L. Syn. L. alba LamK. (Mehndi or Henna Hindi) of ...

    Indian Academy of Sciences (India)

    Lawsonia inermis L. Syn. L. alba. LamK. (Mehndi or Henna Hindi) of. Lythraceae is a small-sized and much branched tree which is largely cultivated and groomed in the form of hedges. Flowers are white or rose-coloured, fragrant and borne on pyramidal bunches. Fruits bear numerous seeds. Hair dye is prepared from the ...

  6. Effekten af udvidet periodisk syn på person- og varebiler

    DEFF Research Database (Denmark)

    Bernhoft, Inger Marie; Pilegaard, Ninette

    Dette notat har til formål at gennemføre en beregning af costs og benefits af udvidet periodisk syn af person- og varebiler i Danmark, under forudsætning af der gennemføres ét syn af per-son- og varebiler efter fire år, derefter ét syn efter to år og derefter én gang årligt (4,2,1,1…), som...... skulle være efter fire år, derefter efter to år, derefter efter to år igen og derefter årligt (4,2,2,1,1…). Dvs. at der i vores basisscenarie vil være ét ekstra syn (ved 7. år) i forhold til ’Autofore-rapportens’ ba-sis-scenarie. Dog udføres i ’Autofore-rapporten’ også følsomhedsberegninger...

  7. Detecting SYN flood attacks via statistical monitoring charts: A comparative study

    KAUST Repository

    Bouyeddou, Benamar; Harrou, Fouzi; Sun, Ying; Kadri, Benamar

    2017-01-01

    Accurate detection of cyber-attacks plays a central role in safeguarding computer networks and information systems. This paper addresses the problem of detecting SYN flood attacks, which are the most popular Denial of Service (DoS) attacks. Here, we

  8. Phytoremedial Potential of Typha latifolia, Eichornia crassipes and Monochoria hastata found in Contaminated Water Bodies Across Ranchi City (India).

    Science.gov (United States)

    Hazra, Moushumi; Avishek, Kirti; Pathak, Gopal

    2015-01-01

    Phytoremediation is an emerging technology that uses green plants (living machines) for removal of contaminants of concern (COC). These plant species have the potential to remove the COC, thereby restoring the original condition of soil or water environment. The present study focuses on assessing the heavy metals (COC) present in the contaminated water bodies of Ranchi city, Jharkhand, India. Phytoremedial potential of three plant species: Typha latifolia, Eichornia crassipes and Monochoria hastata were assessed in the present study. Heterogenous accumulation of metals was found in the three plant species. It was observed that the ratio of heavy metal concentration was different in different parts, i.e., shoots and roots. Positive results were also obtained for translocation factor of all species with minimum of 0.10 and maximum of 1. It was found experimentally that M. hastata has the maximum BFC for root as 4.32 and shoot as 2.70 (for Manganese). For T. latifolia, BCF of maximum was observed for root (163.5) and respective shoot 86.46 (for Iron), followed by 7.3 and 5.8 for root and shoot (for Manganese) respectively. E. crassipes was found to possess a maximum BCF of 278.6 (for Manganese and 151 (for Iron) and shoot as 142 (for Manganese) and 36.13 (for Iron).

  9. Bioprospecting the Curculigoside-Cinnamic Acid-Rich Fraction from Molineria latifolia Rhizome as a Potential Antioxidant Therapeutic Agent

    Directory of Open Access Journals (Sweden)

    Der Jiun Ooi

    2016-06-01

    Full Text Available Increasing evidence from both experimental and clinical studies depicts the involvement of oxidative stress in the pathogenesis of various diseases. Specifically, disruption of homeostatic redox balance in accumulated body fat mass leads to obesity-associated metabolic syndrome. Strategies for the restoration of redox balance, potentially by exploring potent plant bioactives, have thus become the focus of therapeutic intervention. The present study aimed to bioprospect the potential use of the curculigoside-cinnamic acid-rich fraction from Molineria latifolia rhizome as an antioxidant therapeutic agent. The ethyl acetate fraction (EAF isolated from M. latifolia rhizome methanolic extract (RME contained the highest amount of phenolic compounds, particularly curculigoside and cinnamic acid. EAF demonstrated glycation inhibitory activities in both glucose- and fructose-mediated glycation models. In addition, in vitro chemical-based and cellular-based antioxidant assays showed that EAF exhibited high antioxidant activities and a protective effect against oxidative damage in 3T3-L1 preadipocytes. Although the efficacies of individual phenolics differed depending on the structure and concentration, a correlational study revealed strong correlations between total phenolic contents and antioxidant capacities. The results concluded that enriched phenolic contents in EAF (curculigoside-cinnamic acid-rich fraction contributed to the overall better reactivity. Our data suggest that this bioactive-rich fraction warrants therapeutic potential against oxidative stress-related disorders.

  10. A comparison of isozyme and quantitative genetic variation in Pinus contorta ssp. latifolia by F{sub ST}

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Rong-Cai; Yeh, F.C. [Univ. of Alberta, Edmonton (Canada); Yanchuk, A.D. [British Columbia Ministry of Forests (Canada)

    1996-03-01

    We employed F-statistics to analyze quantitative and isozyme variation among five populations of Pinus contorta ssp. latifolia, a wind-pollinated outcrossing conifer with wide and continuous distribution in west North America. Estimates of population differentiation (F{sub ST}) for six quantitative traits were compared with the overall estimate of the differentiation (F*{sub ST}) from 19 isozymes that tested neutral to examine whether similar evolutionary processes were involved in morphological and isozyme differentiation. While the F{sub ST} estimates for specific gravity, stem diameter, stem height and branch length were significantly greater than the F*{sub ST} estimate, as judged from the 95% confidence intervals by bootstrapping, the F{sub ST} estimates for branch angle and branch diameter were indistinguishable from the F*{sub ST} estimate. Differentiation in stem height and stem diameter might reflect the inherent adaptation of the populations for rapid growth to escape suppression by neighboring plants during establishment and to regional differences in photoperiod, precipitation and temperature. In contrast, divergences in wood specific gravity and branch length might be correlated responses to population differentiation in stem growth. Possible bias in the estimation of F{sub ST} due to Hardy-Weinberg disequilibrium (F{sub IS} {ne} 0), linkage disequilibrium, maternal effects and nonadditive genetic effects was discussed with special reference to P. contorta ssp. latifolia. 48 refs., 1 fig., 3 tabs.

  11. Nutrient uptake from liquid digestate using ornamental aquatic macrophytes (Canna indica, Iris pseudacorus, Typha latifolia) in a constructed wetland system

    Science.gov (United States)

    Ediviani, W.; Priadi, C. R.; Moersidik, S. S.

    2018-05-01

    Indonesia has implemented energy recovery from organic (food) waste by anaerobic digestion method, but the digestate was commonly treated only by composting, and still as a separated treatment (not integrated into a resource recovery system). Whilst not getting any pretreatment, the digestate was disposed to the environment and then act as a pollutant. Yet it contains nutrients which could be recovered as a nutrient source for plants. The study was about how ornamental aquatic macrophytes could uptake nitrogen from liquid digestate in a constructed wetland method. Canna indica, Iris pseudacorus, and Typha latifolia were the experimented ornamental aquatic macrophytes used to uptake the nutrient (nitrogen—N) from liquid digestate. The study showed that the highest N uptake was done by C. indica (25.1%) which has the highest biomass increment as well (80.5%). Effluent quality improvement also shown by N removal by C. indica (68.5—76.4% TN), I. pseudacorus (61.8—71.3% TN), and T. latifolia (61.6—74.5%). This research proved that C. indica has the performance for the N uptake, best N removal efficiency, with a great growth rate as well. This system using C. indica could also improve the water quality of the effluent and add the aesthetic of environment.

  12. Transcription profiles of mitochondrial genes correlate with mitochondrial DNA haplotypes in a natural population of Silene vulgaris

    Directory of Open Access Journals (Sweden)

    Olson Matthew S

    2010-01-01

    Full Text Available Abstract Background Although rapid changes in copy number and gene order are common within plant mitochondrial genomes, associated patterns of gene transcription are underinvestigated. Previous studies have shown that the gynodioecious plant species Silene vulgaris exhibits high mitochondrial diversity and occasional paternal inheritance of mitochondrial markers. Here we address whether variation in DNA molecular markers is correlated with variation in transcription of mitochondrial genes in S. vulgaris collected from natural populations. Results We analyzed RFLP variation in two mitochondrial genes, cox1 and atp1, in offspring of ten plants from a natural population of S. vulgaris in Central Europe. We also investigated transcription profiles of the atp1 and cox1 genes. Most DNA haplotypes and transcription profiles were maternally inherited; for these, transcription profiles were associated with specific mitochondrial DNA haplotypes. One individual exhibited a pattern consistent with paternal inheritance of mitochondrial DNA; this individual exhibited a transcription profile suggestive of paternal but inconsistent with maternal inheritance. We found no associations between gender and transcript profiles. Conclusions Specific transcription profiles of mitochondrial genes were associated with specific mitochondrial DNA haplotypes in a natural population of a gynodioecious species S. vulgaris. Our findings suggest the potential for a causal association between rearrangements in the plant mt genome and transcription product variation.

  13. The complete chloroplast genome sequences of Lychnis wilfordii and Silene capitata and comparative analyses with other Caryophyllaceae genomes.

    Science.gov (United States)

    Kang, Jong-Soo; Lee, Byoung Yoon; Kwak, Myounghai

    2017-01-01

    The complete chloroplast genomes of Lychnis wilfordii and Silene capitata were determined and compared with ten previously reported Caryophyllaceae chloroplast genomes. The chloroplast genome sequences of L. wilfordii and S. capitata contain 152,320 bp and 150,224 bp, respectively. The gene contents and orders among 12 Caryophyllaceae species are consistent, but several microstructural changes have occurred. Expansion of the inverted repeat (IR) regions at the large single copy (LSC)/IRb and small single copy (SSC)/IR boundaries led to partial or entire gene duplications. Additionally, rearrangements of the LSC region were caused by gene inversions and/or transpositions. The 18 kb inversions, which occurred three times in different lineages of tribe Sileneae, were thought to be facilitated by the intermolecular duplicated sequences. Sequence analyses of the L. wilfordii and S. capitata genomes revealed 39 and 43 repeats, respectively, including forward, palindromic, and reverse repeats. In addition, a total of 67 and 56 simple sequence repeats were discovered in the L. wilfordii and S. capitata chloroplast genomes, respectively. Finally, we constructed phylogenetic trees of the 12 Caryophyllaceae species and two Amaranthaceae species based on 73 protein-coding genes using both maximum parsimony and likelihood methods.

  14. Neutron Activation Foil and Thermoluminescent Dosimeter Responses to a Lead Reflected Pulse of the CEA Valduc SILENE Critical Assembly

    International Nuclear Information System (INIS)

    Miller, Thomas Martin; Celik, Cihangir; Isbell, Kimberly McMahan; Lee, Yi-kang; Gagnier, Emmanuel; Authier, Nicolas; Piot, Jerome; Jacquet, Xavier; Rousseau, Guillaume; Reynolds, Kevin H.

    2016-01-01

    This benchmark experiment was conducted as a joint venture between the US Department of Energy (DOE) and the French Commissariat à l'Energie Atomique (CEA). Staff at the Oak Ridge National Laboratory (ORNL) in the US and the Centre de Valduc in France planned this experiment. The experiment was conducted on October 13, 2010 in the SILENE critical assembly facility at Valduc. Several other organizations contributed to this experiment and the subsequent evaluation, including CEA Saclay, Lawrence Livermore National Laboratory (LLNL), the Y-12 National Security Complex (NSC), Babcock International Group in the United Kingdom, and Los Alamos National Laboratory (LANL). The goal of this experiment was to measure neutron activation and thermoluminescent dosimeter (TLD) doses from a source similar to a fissile solution critical excursion. The resulting benchmark can be used for validation of computer codes and nuclear data libraries as required when performing analysis of criticality accident alarm systems (CAASs). A secondary goal of this experiment was to qualitatively test performance of two CAAS detectors similar to those currently and formerly in use in some US DOE facilities. The detectors tested were the CIDAS MkX and the Rocky Flats NCD-91. The CIDAS detects gammas with a Geiger-Muller tube, and the Rocky Flats detects neutrons via charged particles produced in a thin 6 LiF disc, depositing energy in a Si solid-state detector. These detectors were being evaluated to determine whether they would alarm, so they were not expected to generate benchmark quality data.

  15. Neutron Activation Foil and Thermoluminescent Dosimeter Responses to a Polyethylene Reflected Pulse of the CEA Valduc SILENE Critical Assembly

    Energy Technology Data Exchange (ETDEWEB)

    Miller, Thomas Martin [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Celik, Cihangir [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); McMahan, Kimberly L. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Lee, Yi-kang [French Atomic Energy Commission (CEA), Saclay (France); Gagnier, Emmanuel [French Atomic Energy Commission (CEA), Centre de Saclay, Gif sur Yvette; Authier, Nicolas [French Atomic Energy Commission (CEA), Salives (France). Valduc Centre for Nuclear Studies; Piot, Jerome [French Atomic Energy Commission (CEA), Salives (France). Valduc Centre for Nuclear Studies; Jacquet, Xavier [French Atomic Energy Commission (CEA), Salives (France). Valduc Centre for Nuclear Studies; Rousseau, Guillaume [French Atomic Energy Commission (CEA), Salives (France). Valduc Centre for Nuclear Studies; Reynolds, Kevin H. [Y-12 National Security Complex, Oak Ridge, TN (United States)

    2016-09-01

    This benchmark experiment was conducted as a joint venture between the US Department of Energy (DOE) and the French Commissariat à l'Energie Atomique (CEA). Staff at the Oak Ridge National Laboratory (ORNL) in the US and the Centre de Valduc in France planned this experiment. The experiment was conducted on October 19, 2010 in the SILENE critical assembly facility at Valduc. Several other organizations contributed to this experiment and the subsequent evaluation, including CEA Saclay, Lawrence Livermore National Laboratory (LLNL), the Y-12 National Security Complex (NSC), Babcock International Group in the United Kingdom, and Los Alamos National Laboratory (LANL). The goal of this experiment was to measure neutron activation and thermoluminescent dosimeter (TLD) doses from a source similar to a fissile solution critical excursion. The resulting benchmark can be used for validation of computer codes and nuclear data libraries as required when performing analysis of criticality accident alarm systems (CAASs). A secondary goal of this experiment was to qualitatively test performance of two CAAS detectors similar to those currently and formerly in use in some US DOE facilities. The detectors tested were the CIDAS MkX and the Rocky Flats NCD-91. The CIDAS detects gammas with a Geiger-Muller tube and the Rocky Flats detects neutrons via charged particles produced in a thin 6LiF disc depositing energy in a Si solid state detector. These detectors were being evaluated to determine whether they would alarm, so they were not expected to generate benchmark quality data.

  16. Neutron Activation and Thermoluminescent Detector Responses to a Bare Pulse of the CEA Valduc SILENE Critical Assembly

    Energy Technology Data Exchange (ETDEWEB)

    Miller, Thomas Martin [ORNL; Isbell, Kimberly McMahan [ORNL; Lee, Yi-kang [French Atomic Energy Commission (CEA), Centre de Saclay, Gif sur Yvette; Gagnier, Emmanuel [French Atomic Energy Commission (CEA), Centre de Saclay, Gif sur Yvette; Authier, Nicolas [French Atomic Energy Commission (CEA), Centre de Valduc, Is-sur-Tille; Piot, Jerome [French Atomic Energy Commission (CEA), Centre de Valduc, Is-sur-Tille; Jacquet, Xavier [French Atomic Energy Commission (CEA), Centre de Valduc, Is-sur-Tille; Rousseau, Guillaume [French Atomic Energy Commission (CEA), Centre de Valduc, Is-sur-Tille; Reynolds, Kevin H. [Y-12 National Security Complex

    2016-09-01

    This benchmark experiment was conducted as a joint venture between the US Department of Energy (DOE) and the French Commissariat à l'Energie Atomique (CEA). Staff at the Oak Ridge National Laboratory (ORNL) in the US and the Centre de Valduc in France planned this experiment. The experiment was conducted on October 11, 2010 in the SILENE critical assembly facility at Valduc. Several other organizations contributed to this experiment and the subsequent evaluation, including CEA Saclay, Lawrence Livermore National Laboratory (LLNL), the Y-12 National Security Complex (NSC), Babcock International Group in the United Kingdom, and Los Alamos National Laboratory (LANL). The goal of this experiment was to measure neutron activation and thermoluminescent dosimeter (TLD) doses from a source similar to a fissile solution critical excursion. The resulting benchmark can be used for validation of computer codes and nuclear data libraries as required when performing analysis of criticality accident alarm systems (CAASs). A secondary goal of this experiment was to qualitatively test performance of two CAAS detectors similar to those currently and formerly in use in some US DOE facilities. The detectors tested were the CIDAS MkX and the Rocky Flats NCD-91. These detectors were being evaluated to determine whether they would alarm, so they were not expected to generate benchmark quality data.

  17. Neutron Activation Foil and Thermoluminescent Dosimeter Responses to a Polyethylene Reflected Pulse of the CEA Valduc SILENE Critical Assembly

    International Nuclear Information System (INIS)

    Miller, Thomas Martin; Celik, Cihangir; McMahan, Kimberly L.; Lee, Yi-kang; Gagnier, Emmanuel; Authier, Nicolas

    2016-01-01

    This benchmark experiment was conducted as a joint venture between the US Department of Energy (DOE) and the French Commissariat à l'Energie Atomique (CEA). Staff at the Oak Ridge National Laboratory (ORNL) in the US and the Centre de Valduc in France planned this experiment. The experiment was conducted on October 19, 2010 in the SILENE critical assembly facility at Valduc. Several other organizations contributed to this experiment and the subsequent evaluation, including CEA Saclay, Lawrence Livermore National Laboratory (LLNL), the Y-12 National Security Complex (NSC), Babcock International Group in the United Kingdom, and Los Alamos National Laboratory (LANL). The goal of this experiment was to measure neutron activation and thermoluminescent dosimeter (TLD) doses from a source similar to a fissile solution critical excursion. The resulting benchmark can be used for validation of computer codes and nuclear data libraries as required when performing analysis of criticality accident alarm systems (CAASs). A secondary goal of this experiment was to qualitatively test performance of two CAAS detectors similar to those currently and formerly in use in some US DOE facilities. The detectors tested were the CIDAS MkX and the Rocky Flats NCD-91. The CIDAS detects gammas with a Geiger-Muller tube and the Rocky Flats detects neutrons via charged particles produced in a thin "6LiF disc depositing energy in a Si solid state detector. These detectors were being evaluated to determine whether they would alarm, so they were not expected to generate benchmark quality data.

  18. Analytical Modelling of Canopy Interception Loss from a Juvenile Lodgepole Pine (Pinus contorta var. latifolia) Stand

    Science.gov (United States)

    Carlyle-Moses, D. E.; Lishman, C. E.

    2015-12-01

    In the central interior of British Columbia (BC), Canada, the mountain pine beetle (Dendroctonus ponderosae Hopkins) (MPB) has severely affected the majority of pine species in the region, especially lodgepole pine (Pinus contorta Douglas ex Louden var. latifolia Engelm. ex S. Watson). The loss of mature lodgepole pine stands, including those lost to salvage logging, has resulted in an increase in the number of juvenile pine stands in the interior of BC through planting and natural regrowth. With this change from mature forests to juvenile forests at such a large spatial scale, the water balance of impacted areas may be altered, although the magnitude of such change is uncertain. Previous studies of rainfall partitioning by lodgepole pine and lodgepole pine dominated canopies have focused on mature stands. Thus, rainfall, throughfall and stemflow were measured and canopy interception loss was derived during the growing season of 2010 in a juvenile lodgepole pine dominated stand located approximately 60 km NNW of Kamloops, BC at 51°12'49" N 120°23'43" W, 1290 m above mean sea level. Scaling up from measurements for nine trees, throughfall, stemflow and canopy interception loss accounted for 87.7, 1.8 and 10.5 percent of the 252.9 mm of rain that fell over 38 events during the study period, respectively. The reformulated versions of the Gash and Liu analytical interception loss models estimated cumulative canopy interception loss at 24.7 and 24.6 mm, respectively, compared with the observed 26.5 mm; an underestimate of 1.8 and 1.9 mm or 6.8 and 7.2% of the observed value, respectively. Our results suggest that canopy interception loss is reduced in juvenile stands compared to their mature counterparts and that this reduction is due to the decreased storage capacity offered by these younger canopies. Evaporation during rainfall from juvenile canopies is still appreciable and may be a consequence of the increased proportion of the canopy exposed to wind during events.

  19. Biological control of golden apple snail, Pomacea canaliculata by Chinese soft-shelled turtle, Pelodiscus sinensis in the wild rice, Zizania latifolia field

    Directory of Open Access Journals (Sweden)

    Shengzhang Dong

    2012-04-01

    Full Text Available The wild rice, Zizania latifolia Turcz, used to be one of the important aquatic vegetables cultivated in China. Recently, the golden apple snail - GAS (Pomacea canaliculata (Lamarck was found to be a major invasive pest attacking Z. latifolia. To control efficiently GAS, predation by the Chinese soft-shelled turtles (Pelodiscus sinensis on GAS was evaluated in laboratory and field trials. P. sinensis had a strong predatory capacity and selectivity for GAS both in laboratory and field conditions. All the sizes of P. sinensis prefer to capture smaller snails. The optimum number of P. sinensis released in Z. latifolia field was dependent on the density of over-wintered GAS, and varied between 30 and 50 turtles per 666.7 m². The number of GAS declined in the fields with turtles as compared to turtle-free field. A pattern of releasing P. sinensis in Z. latifolia fields was developed and widely adopted by farmers because of much more benefit besides biologically controlling GAS.

  20. The distribution of a non-native (Rosa multiflora) and native (Kalmia latifolia) shrub in mature closed-canopy forests across soil fertility gradients

    Science.gov (United States)

    Cynthia D. Huebner; Jim Steinman; Todd F. Hutchinson; Todd E. Ristau; Alejandro A. Royo

    2014-01-01

    Background and aims. A soil fertility gradient, ranging from infertile to highly fertile soils, may define whether or not a plant will establish and spread at a site. We evaluated whether or not such a fertility gradient exists for Rosa multiflora Thunb., a nonnative invasive shrub, and Kalmia latifolia L., a...

  1. Studies on Colombian cryptogams XVII. On a new antipodal element in the Neotropical Paramos-Dendrocryphaea latifolia sp.nov. (Musci)

    NARCIS (Netherlands)

    Griffin, D.; Gradstein, S.R.; Aguirre C., J.

    1982-01-01

    Dendrocryphaea latifolia sp.nov. from the Páramo de Chisacá, Colombia is described and illustrated. It is allied to D. cuspidata from austral South America but differs from that species in the broader leaves, globose capsules and the basally smooth exostome teeth. A key to the four species of

  2. Documenting the Regional and local distribution of Kalmia latifolia and Rosa multiflora in West Virginia, Ohio, and Pennsylvania Forests along a soil fertility gradient

    Science.gov (United States)

    Cynthia D. Huebner; Todd Hutchinson; Todd Ristau; Alejandro Royo; James Steinman

    2012-01-01

    Use of environmental variables as predictors of vegetation distribution patterns has long been a focus of ecology. However, the effect of edaphic factors on vegetation pattern is often measured using surrogates such as topography, because accurate measures of soil fertility and nutrients are unavailable or rare (Marage and Gégout 2009). Kalmia latifolia...

  3. Excitatory Synaptic Drive and Feedforward Inhibition in the Hippocampal CA3 Circuit Are Regulated by SynCAM 1.

    Science.gov (United States)

    Park, Kellie A; Ribic, Adema; Laage Gaupp, Fabian M; Coman, Daniel; Huang, Yuegao; Dulla, Chris G; Hyder, Fahmeed; Biederer, Thomas

    2016-07-13

    Select adhesion proteins control the development of synapses and modulate their structural and functional properties. Despite these important roles, the extent to which different synapse-organizing mechanisms act across brain regions to establish connectivity and regulate network properties is incompletely understood. Further, their functional roles in different neuronal populations remain to be defined. Here, we applied diffusion tensor imaging (DTI), a modality of magnetic resonance imaging (MRI), to map connectivity changes in knock-out (KO) mice lacking the synaptogenic cell adhesion protein SynCAM 1. This identified reduced fractional anisotropy in the hippocampal CA3 area in absence of SynCAM 1. In agreement, mossy fiber refinement in CA3 was impaired in SynCAM 1 KO mice. Mossy fibers make excitatory inputs onto postsynaptic specializations of CA3 pyramidal neurons termed thorny excrescences and these structures were smaller in the absence of SynCAM 1. However, the most prevalent targets of mossy fibers are GABAergic interneurons and SynCAM 1 loss unexpectedly reduced the number of excitatory terminals onto parvalbumin (PV)-positive interneurons in CA3. SynCAM 1 KO mice additionally exhibited lower postsynaptic GluA1 expression in these PV-positive interneurons. These synaptic imbalances in SynCAM 1 KO mice resulted in CA3 disinhibition, in agreement with reduced feedforward inhibition in this network in the absence of SynCAM 1-dependent excitatory drive onto interneurons. In turn, mice lacking SynCAM 1 were impaired in memory tasks involving CA3. Our results support that SynCAM 1 modulates excitatory mossy fiber inputs onto both interneurons and principal neurons in the hippocampal CA3 area to balance network excitability. This study advances our understanding of synapse-organizing mechanisms on two levels. First, the data support that synaptogenic proteins guide connectivity and can function in distinct brain regions even if they are expressed broadly

  4. Evaluation of the concrete shield compositions from the 2010 criticality accident alarm system benchmark experiments at the CEA Valduc SILENE facility

    International Nuclear Information System (INIS)

    Miller, Thomas Martin; Celik, Cihangir; Dunn, Michael E; Wagner, John C; McMahan, Kimberly L; Authier, Nicolas; Jacquet, Xavier; Rousseau, Guillaume; Wolff, Herve; Savanier, Laurence; Baclet, Nathalie; Lee, Yi-kang; Trama, Jean-Christophe; Masse, Veronique; Gagnier, Emmanuel; Naury, Sylvie; Blanc-Tranchant, Patrick; Hunter, Richard; Kim, Soon; Dulik, George Michael; Reynolds, Kevin H.

    2015-01-01

    In October 2010, a series of benchmark experiments were conducted at the French Commissariat a l'Energie Atomique et aux Energies Alternatives (CEA) Valduc SILENE facility. These experiments were a joint effort between the United States Department of Energy Nuclear Criticality Safety Program and the CEA. The purpose of these experiments was to create three benchmarks for the verification and validation of radiation transport codes and evaluated nuclear data used in the analysis of criticality accident alarm systems. This series of experiments consisted of three single-pulsed experiments with the SILENE reactor. For the first experiment, the reactor was bare (unshielded), whereas in the second and third experiments, it was shielded by lead and polyethylene, respectively. The polyethylene shield of the third experiment had a cadmium liner on its internal and external surfaces, which vertically was located near the fuel region of SILENE. During each experiment, several neutron activation foils and thermoluminescent dosimeters (TLDs) were placed around the reactor. Nearly half of the foils and TLDs had additional high-density magnetite concrete, high-density barite concrete, standard concrete, and/or BoroBond shields. CEA Saclay provided all the concrete, and the US Y-12 National Security Complex provided the BoroBond. Measurement data from the experiments were published at the 2011 International Conference on Nuclear Criticality (ICNC 2011) and the 2013 Nuclear Criticality Safety Division (NCSD 2013) topical meeting. Preliminary computational results for the first experiment were presented in the ICNC 2011 paper, which showed poor agreement between the computational results and the measured values of the foils shielded by concrete. Recently the hydrogen content, boron content, and density of these concrete shields were further investigated within the constraints of the previously available data. New computational results for the first experiment are now available

  5. SynDIG4/Prrt1 Is Required for Excitatory Synapse Development and Plasticity Underlying Cognitive Function

    Directory of Open Access Journals (Sweden)

    Lucas Matt

    2018-02-01

    Full Text Available Altering AMPA receptor (AMPAR content at synapses is a key mechanism underlying the regulation of synaptic strength during learning and memory. Previous work demonstrated that SynDIG1 (synapse differentiation-induced gene 1 encodes a transmembrane AMPAR-associated protein that regulates excitatory synapse strength and number. Here we show that the related protein SynDIG4 (also known as Prrt1 modifies AMPAR gating properties in a subunit-dependent manner. Young SynDIG4 knockout (KO mice have weaker excitatory synapses, as evaluated by immunocytochemistry and electrophysiology. Adult SynDIG4 KO mice show complete loss of tetanus-induced long-term potentiation (LTP, while mEPSC amplitude is reduced by only 25%. Furthermore, SynDIG4 KO mice exhibit deficits in two independent cognitive assays. Given that SynDIG4 colocalizes with the AMPAR subunit GluA1 at non-synaptic sites, we propose that SynDIG4 maintains a pool of extrasynaptic AMPARs necessary for synapse development and function underlying higher-order cognitive plasticity.

  6. Effects of feeding the herb Borreria latifolia on the meat quality of village chickens in Malaysia.

    Science.gov (United States)

    Abbood, Ali A; Kassim, Azhar Bin; Jawad, Hasan S A; Manap, Yazid Abdul; Sazili, Awis Qurni

    2017-06-01

    An experiment was carried out to estimate the meat quality characteristics of village chickens (Gallus gallus) fed diets supplemented with dry leaves of Borreria latifolia (BL) used as a potential antioxidant source in chicken feed. In this study, 252 sexed 9-week-old village chickens with mean live body weight of 1,525.4 g for males and 1,254.1 g for females were divided into 7 groups (each group 18 birds) for each sex represented in 2 experiments. The first experiment was to evaluate the antioxidant activity of BL and the effect on meat quality through a comparison with Rosmarinus officinalis (RO); hence, 3 groups were conducted and included: T1 (control), basal diet without supplementation; T2, basal diet with 1% of BL; T3, basal diet with 1% of RO. T2 and T3 significantly affect pH value, lipid oxidation, cooking loss, and overall acceptability compared to T1, while no significant difference was observed between the dietary groups in respect of drip loss, color, tenderness, fatty acid profile, and meat composition. Furthermore, a significant effect of sex on lipid oxidation, pH, yellowness, and fatty acid profile was observed. There was no significant effect of sex on WHC, tenderness, lightness, redness, and sensory evaluation. A significant influence of postmortem aging period was detected on lipid oxidation, pH, tenderness, cooking loss, and redness. The obtained result in this study revealed a significance in the interaction of herb by sex in pH parameter and between herb and sex, herb by aging period, sex by aging period, and the herb by sex by aging period interactions with regard to lipid oxidation test. The second experiment was to estimate the effect of 3 different levels of BL on meat quality. Four groups were provided and involved: T1 (control), basal diet without supplementation; T2, basal diet with 1.5% of BL; T3, basal diet with 2% of BL; and T4, basal diet with 2.5% of BL. The result of this study showed a significant effect (P < 0.05) of the

  7. Evaluation of Compatibility between Beetle-Killed Lodgepole Pine (Pinus Contorta var. Latifolia) Wood with Portland Cement.

    Science.gov (United States)

    Pasca, Sorin A; Hartley, Ian D; Reid, Matthew E; Thring, Ronald W

    2010-12-17

    The compatibility of wood from mountain pine beetle (Dendroctonus ponderosa) killed lodgepole pine (Pinus contorta var. latifolia) with Portland cement was investigated based on time-since-death as a quantitative estimator, and the presence of blue-stained sapwood, brown rot, or white rot as qualitative indicators. The exothermic behavior of cement hydration, maximum heat rate, time to reach this maximum, and total heat released within a 3.5-24 h interval were used for defining a new wood-cement compatibility index (CX). CX was developed and accounted for large discrepancies in assessing wood-cement compatibility compared to the previous methods. Using CX, no significant differences were found between fresh or beetle-killed wood with respect to the suitability for cement; except for the white rot samples which reached or exceeded the levels of incompatibility. An outstanding physicochemical behavior was also found for blue-stained sapwood and cement, producing significantly higher compatibility indices.

  8. Evaluation of Compatibility between Beetle-Killed Lodgepole Pine (Pinus Contorta var. Latifolia Wood with Portland Cement

    Directory of Open Access Journals (Sweden)

    Ian D. Hartley

    2010-12-01

    Full Text Available The compatibility of wood from mountain pine beetle (Dendroctonus ponderosa killed lodgepole pine (Pinus contorta var. latifolia with Portland cement was investigated based on time-since-death as a quantitative estimator, and the presence of blue-stained sapwood, brown rot, or white rot as qualitative indicators. The exothermic behavior of cement hydration, maximum heat rate, time to reach this maximum, and total heat released within a 3.5–24 h interval were used for defining a new wood-cement compatibility index (CX. CX was developed and accounted for large discrepancies in assessing wood-cement compatibility compared to the previous methods. Using CX, no significant differences were found between fresh or beetle-killed wood with respect to the suitability for cement; except for the white rot samples which reached or exceeded the levels of incompatibility. An outstanding physicochemical behavior was also found for blue-stained sapwood and cement, producing significantly higher compatibility indices.

  9. Intracellular Assembly of Cyanophage Syn5 Proceeds through a Scaffold-Containing Procapsid▿ †

    OpenAIRE

    Raytcheva, Desislava A.; Haase-Pettingell, Cameron; Piret, Jacqueline M.; King, Jonathan A.

    2010-01-01

    Syn5 is a marine cyanophage that is propagated on the marine photosynthetic cyanobacterial strain Synechococcus sp. WH8109 under laboratory conditions. Cryoelectron images of this double-stranded DNA (dsDNA) phage reveal an icosahedral capsid with short tail appendages and a single novel hornlike structure at the vertex opposite the tail. Despite the major impact of cyanophages on life in the oceans, there is limited information on cyanophage intracellular assembly processes within their phot...

  10. A first step beyond traditional boundaries: destination therapy with the SynCardia total artificial heart.

    Science.gov (United States)

    Spiliopoulos, Sotirios; Koerfer, Reiner; Tenderich, Gero

    2014-06-01

    The SynCardia total artificial heart is currently used as a bridge to transplantation therapy in cases of irreversible, acute or chronic, biventricular heart failure. We describe the implementation of this technology in the context of destination therapy in a patient with an end-stage heart failure on grounds of primary amyloidosis. © The Author 2014. Published by Oxford University Press on behalf of the European Association for Cardio-Thoracic Surgery. All rights reserved.

  11. The alpine cushion plant Silene acaulis as foundation species: a bug's-eye view to facilitation and microclimate.

    Directory of Open Access Journals (Sweden)

    Olivia Molenda

    Full Text Available Alpine ecosystems are important globally with high levels of endemic and rare species. Given that they will be highly impacted by climate change, understanding biotic factors that maintain diversity is critical. Silene acaulis is a common alpine nurse plant shown to positively influence the diversity and abundance of organisms--predominantly other plant species. The hypothesis that cushion or nurse plants in general are important to multiple trophic levels has been proposed but rarely tested. Alpine arthropod diversity is also largely understudied worldwide, and the plant-arthropod interactions reported are mostly negative, that is,. herbivory. Plant and arthropod diversity and abundance were sampled on S. acaulis and at paired adjacent microsites with other non-cushion forming vegetation present on Whistler Mountain, B.C., Canada to examine the relative trophic effects of cushion plants. Plant species richness and abundance but not Simpson's diversity index was higher on cushion microsites relative to other vegetation. Arthropod richness, abundance, and diversity were all higher on cushion microsites relative to other vegetated sites. On a microclimatic scale, S. acaulis ameliorated stressful conditions for plants and invertebrates living inside it, but the highest levels of arthropod diversity were observed on cushions with tall plant growth. Hence, alpine cushion plants can be foundation species not only for other plant species but other trophic levels, and these impacts are expressed through both direct and indirect effects associated with altered environmental conditions and localized productivity. Whilst this case study tests a limited subset of the membership of alpine animal communities, it clearly demonstrates that cushion-forming plant species are an important consideration in understanding resilience to global changes for many organisms in addition to other plants.

  12. Improving niche projections of plant species under climate change: Silene acaulis on the British Isles as a case study

    Science.gov (United States)

    Ferrarini, Alessandro; Alsafran, Mohammed H. S. A.; Dai, Junhu; Alatalo, Juha M.

    2018-04-01

    Empirical works to assist in choosing climatically relevant variables in the attempt to predict climate change impacts on plant species are limited. Further uncertainties arise in choice of an appropriate niche model. In this study we devised and tested a sharp methodological framework, based on stringent variable ranking and filtering and flexible model selection, to minimize uncertainty in both niche modelling and successive projection of plant species distributions. We used our approach to develop an accurate, parsimonious model of Silene acaulis (L.) presence/absence on the British Isles and to project its presence/absence under climate change. The approach suggests the importance of (a) defining a reduced set of climate variables, actually relevant to species presence/absence, from an extensive list of climate predictors, and (b) considering climate extremes instead of, or together with, climate averages in projections of plant species presence/absence under future climate scenarios. Our methodological approach reduced the number of relevant climate predictors by 95.23% (from 84 to only 4), while simultaneously achieving high cross-validated accuracy (97.84%) confirming enhanced model performance. Projections produced under different climate scenarios suggest that S. acaulis will likely face climate-driven fast decline in suitable areas on the British Isles, and that upward and northward shifts to occupy new climatically suitable areas are improbable in the future. Our results also imply that conservation measures for S. acaulis based upon assisted colonization are unlikely to succeed on the British Isles due to the absence of climatically suitable habitat, so different conservation actions (seed banks and/or botanical gardens) are needed.

  13. Neutron Activation Foil and Thermoluminescent Dosimeter Responses to a Lead Reflected Pulse of the CEA Valduc SILENE Critical Assembly

    Energy Technology Data Exchange (ETDEWEB)

    Miller, Thomas Martin [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Celik, Cihangir [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Isbell, Kimberly McMahan [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Lee, Yi-kang [Commissariat a l' Energie Atomique et aux Energies Alternatives (CEA-Saclay), Gif-sur-Yvette (France); Gagnier, Emmanuel [Commissariat a l' Energie Atomique et aux Energies Alternatives (CEA-Saclay), Gif-sur-Yvette (France); Authier, Nicolas [Commissariat a l' Energie Atomique et aux Energies Alternatives (CEA-Saclay), Gif-sur-Yvette (France); Piot, Jerome [Commissariat a l' Energie Atomique et aux Energies Alternatives (CEA-Saclay), Gif-sur-Yvette (France); Jacquet, Xavier [Commissariat a l' Energie Atomique et aux Energies Alternatives (CEA-Saclay), Gif-sur-Yvette (France); Rousseau, Guillaume [Commissariat a l' Energie Atomique et aux Energies Alternatives (CEA-Saclay), Gif-sur-Yvette (France); Reynolds, Kevin H. [Y-12 National Security Complex, Oak Ridge, TN (United States)

    2016-09-01

    This benchmark experiment was conducted as a joint venture between the US Department of Energy (DOE) and the French Commissariat à l'Energie Atomique (CEA). Staff at the Oak Ridge National Laboratory (ORNL) in the US and the Centre de Valduc in France planned this experiment. The experiment was conducted on October 13, 2010 in the SILENE critical assembly facility at Valduc. Several other organizations contributed to this experiment and the subsequent evaluation, including CEA Saclay, Lawrence Livermore National Laboratory (LLNL), the Y-12 National Security Complex (NSC), Babcock International Group in the United Kingdom, and Los Alamos National Laboratory (LANL). The goal of this experiment was to measure neutron activation and thermoluminescent dosimeter (TLD) doses from a source similar to a fissile solution critical excursion. The resulting benchmark can be used for validation of computer codes and nuclear data libraries as required when performing analysis of criticality accident alarm systems (CAASs). A secondary goal of this experiment was to qualitatively test performance of two CAAS detectors similar to those currently and formerly in use in some US DOE facilities. The detectors tested were the CIDAS MkX and the Rocky Flats NCD-91. The CIDAS detects gammas with a Geiger-Muller tube, and the Rocky Flats detects neutrons via charged particles produced in a thin 6LiF disc, depositing energy in a Si solid-state detector. These detectors were being evaluated to determine whether they would alarm, so they were not expected to generate benchmark quality data.

  14. Effect of genotype, Cr(III and Cr(VI on plant growth and micronutrient status in Silene vulgaris (Moench

    Directory of Open Access Journals (Sweden)

    A. E. Pradas-del-Real

    2013-06-01

    Full Text Available Chromium released into the environment from industrial activities has become an important environmental concern. Silene vulgaris has been proven to be tolerant to many heavy metals, so it is considered an interesting species in the revegetation and restoration of polluted soils, but no information is available about its response to Cr. The objective of this work was to study uptake and influence on plant growth of Cr(III and Cr(VI in six genotypes (four hermaphrodites and two females of S. vulgaris from different sites of Madrid (Spain. Plants were treated for 12 days with 60 µM of Cr(III or Cr(VI in semihydroponics. Dry weights, soil-plant analysis development values (SPAD reading with chlorophylls and micronutrient and total Cr concentrations were determined. Metal uptake was higher in presence of Cr(VI than of Cr(III and poorly translocated to the shoots. In both cases S. vulgaris did not show visual toxicity symptoms, biomass reduction, or differences among SPAD values as consequence of Cr additions. However genotypes SV36 and SV38 showed Fe and Mn imbalance. This is the first report on the relatively good performance of hermaphrodite and female S. vulgaris genotypes in Cr uptake and physiological traits, but further studies will be necessary to elucidate the mechanisms by which the gender may influence these variables. S. vulgaris presented high diversity at genotypic level; the treatment with hexavalent Cr increased the differences among genotypes so the use of cuttings from an homogeneous genotype seems to be an adequate method for the study of this species.

  15. Transgenerational epigenetics: Inheritance of global cytosine methylation and methylation-related epigenetic markers in the shrub Lavandula latifolia.

    Science.gov (United States)

    Herrera, Carlos M; Alonso, Conchita; Medrano, Mónica; Pérez, Ricardo; Bazaga, Pilar

    2018-04-01

    The ecological and evolutionary significance of natural epigenetic variation (i.e., not based on DNA sequence variants) variation will depend critically on whether epigenetic states are transmitted from parents to offspring, but little is known on epigenetic inheritance in nonmodel plants. We present a quantitative analysis of transgenerational transmission of global DNA cytosine methylation (= proportion of all genomic cytosines that are methylated) and individual epigenetic markers (= methylation status of anonymous MSAP markers) in the shrub Lavandula latifolia. Methods based on parent-offspring correlations and parental variance component estimation were applied to epigenetic features of field-growing plants ('maternal parents') and greenhouse-grown progenies. Transmission of genetic markers (AFLP) was also assessed for reference. Maternal parents differed significantly in global DNA cytosine methylation (range = 21.7-36.7%). Greenhouse-grown maternal families differed significantly in global methylation, and their differences were significantly related to maternal origin. Methylation-sensitive amplified polymorphism (MSAP) markers exhibited significant transgenerational transmission, as denoted by significant maternal variance component of marker scores in greenhouse families and significant mother-offspring correlations of marker scores. Although transmission-related measurements for global methylation and MSAP markers were quantitatively lower than those for AFLP markers taken as reference, this study has revealed extensive transgenerational transmission of genome-wide global cytosine methylation and anonymous epigenetic markers in L. latifolia. Similarity of results for global cytosine methylation and epigenetic markers lends robustness to this conclusion, and stresses the value of considering both types of information in epigenetic studies of nonmodel plants. © 2018 Botanical Society of America.

  16. Rosebud syncoal partnership SynCoal{sup {reg_sign}} demonstration technology development update

    Energy Technology Data Exchange (ETDEWEB)

    Sheldon, R.W. [Rosebud SynCoal Company, Billings, MT (United States); Heintz, S.J. [Department of Energy, Pittsburgh, PA (United States)

    1995-12-01

    Rosebud SynCoal{reg_sign} Partnership`s Advanced Coal Conversion Process (ACCP) is an advanced thermal coal upgrading process coupled with physical cleaning techniques to upgrade high moisture, low-rank coals to produce a high-quality, low-sulfur fuel. The coal is processed through two vibrating fluidized bed reactors where oxygen functional groups are destroyed removing chemically bound water, carboxyl and carbonyl groups, and volatile sulfur compounds. After thermal upgrading, the SynCoal{reg_sign} is cleaned using a deep-bed stratifier process to effectively separate the pyrite rich ash. The SynCoal{reg_sign} process enhances low-rank western coals with moisture contents ranging from 2555%, sulfur contents between 0.5 and 1.5 %, and heating values between 5,500 and 9,000 Btu/lb. The upgraded stable coal product has moisture contents as low as 1 %, sulfur contents as low as 0.3%, and heating values up to 12,000 Btu/lb.

  17. High-level Zn and Cd tolerance in Silene paradoxa L. from a moderately Cd- and Zn-contaminated copper mine tailing

    International Nuclear Information System (INIS)

    Arnetoli, Miluscia; Vooijs, Riet; Gonnelli, Cristina; Gabbrielli, Roberto; Verkleij, Jos A.C.; Schat, Henk

    2008-01-01

    Cadmium and zinc tolerance were examined in populations of Silene paradoxa, one from uncontaminated calcareous soil (CVD) and one from a mine tailing (FC) (Cd < 1-15 ppm, Zn 400-1300 ppm, pH 2-6). The mine population exhibited extremely high Zn and Cd tolerance levels, although the degrees of Cd and Zn enrichment relatively low at the population site. Cd and Zn hypertolerance in FC were associated with reduced rates of accumulation of these metals, both in roots and shoots (Cd), or exclusively in shoots (Zn). However, exclusion potentially explained only a minor part of the superior tolerance in FC. Cd hypertolerance in FC was associated with decreased, rather than enhanced phytochelatin accumulation. The remarkably high levels of Cd and Zn hypertolerance in FC might relate to the low soil pH, due to oxidation of sulphide minerals, and the absence of soil organic matter at the FC site. - Silene paradoxa from a copper mine exhibits extreme levels of Zn and Cd tolerance

  18. SynTec Final Technical Report: Synthetic biology for Tailored Enzyme cocktails

    Energy Technology Data Exchange (ETDEWEB)

    Lin, Janine [Novozymes, Inc., Davis, CA (United States); Teter, Sarah [Novozymes, Inc., Davis, CA (United States)

    2016-06-30

    Using a novel enzyme screening method inspired by synthetic biology, Novozymes developed new technology under SynTec which allows for more rapidly tailoring of enzyme cocktails. The methodology can be applied to specific feedstocks, and or coupled to address a specific hydrolytic conversion process context. Using combinatorial high throughput screening of libraries of enzyme domains, we can quickly assess which combination of catalytic modules delivers the best performance for a specific condition. To demonstrate the effectiveness of the screening process, we measured performance of the output catalytic cocktail compared to CTec3/HTec3. SynTec benchmark cocktail - blend of Cellic® CTec3 and HTec3. The test substrate was - ammonia fiber expansion pretreated corn stover (AFEX™ PCS).CTec3/HTec3 was assayed at the optimal pH and temperature, and also in the absence of any pH adjustment. The new enzyme cocktail discovered under SynTec was assayed in the absence of any pH adjustment and at the optimal temperature. Conversion is delivered by SynTec enzyme at significant dose reduction relative to CTec3/HTec3 at the controlled pH optimum, and without titrant required to maintain pH, which delivers additional cost savings relative to current state of the art process. In this 2.5 year $4M project, the team delivered an experimental cocktail that significantly outperformed CTec3/HTec3 for a specific substrate, and for specific hydrolysis conditions. As a means of comparing performance improvement delivered per research dollar spent, we note that SynTec delivered a similar performance improvement to the previous award, in a shorter time and with fewer resources than for the previously successful DOE project DECREASE, a 3.5 year, $25M project, though this project focused on a different substrate and used different hydrolysis conditions. The newly implemented technology for rapid sourcing of new cellulases and hemicellulases from nature is an example of Novozymes

  19. Stereodivergent Synthesis of 1,3-Syn-Polyol Natural Product for Stereochemical-Based Structure Activity Relationship Studies

    Science.gov (United States)

    Zheng, Jiamin

    The 1,3-syn-diol functionality is very common in many natural products. An important class containing this moiety are the 1,3-syn-polyol/pyranone natural products, which have been isolated from a variety of plant sources, and possess biological activities like plant growth inhibition as well as antifeedant, antifungal, antibacterial, and antitumor properties. The feature of this class is a 6-membered lactone where the lactoe oxygen is part of a 1,3-syn-diol motif. To pursue the 1,3-syn-polyol/pyranone natural products, an iterative hydration of polyene strategy was utilized to provide the 1,3- syn-diol functionality, and asymmetric synthetic strategies were explored to form the requisite stereochemistry. The versatility of the asymmetric approach was demonstrated in the synthesis of eupatorium pyranone and also in an ongoing project aimed at the synthesis of SIA7248. As an outgrowth of our work on the total syntheses of 1,3-syn -polyol natural products inspired a stereo-divergent synthesis of 1,3-syn-polyol natural products and their analogs for stereochemical-based structure-activity relationship (SSAR) studies. To identify the key structural factors important for the anticancer activity of the 1,3-syn-polyol/pyranones, a stereo-divergent 16-member library of pyranone/polyol congeners was designed, synthesized and tested with variations in both stereochemistry and numbers of polyol repeat units. Having access to stereochemical isomers of the biologically active natural products allowed us to design experiments that help illustrate their mechanisms of action.

  20. The fate of arsenic, cadmium and lead in Typha latifolia: A case study on the applicability of micro-PIXE in plant ionomics

    International Nuclear Information System (INIS)

    Lyubenova, Lyudmila; Pongrac, Paula; Vogel-Mikuš, Katarina; Mezek, Gašper Kukec; Vavpetič, Primož; Grlj, Nataša; Regvar, Marjana; Pelicon, Primož; Schröder, Peter

    2013-01-01

    Highlights: ► Uptake, accumulation and distribution of multi-elemental pollution. ► Quantitative analysis of the spatal distribution of nutrients in roots and rhizomes. ► Typha latifolia – plant species important for phytoremediation of hazardous xenobiotics. ► Low amounts of Cd and Pb in the inner tissues of roots and rhizomes. ► Predominantly As was found within the vascular tissue – high mobility of the element. -- Abstract: Understanding the uptake, accumulation and distribution of toxic elements in plants is crucial to the design of effective phytoremediation strategies, especially in the case of complex multi-element pollution. Using micro-proton induced X-ray emission, the spatial distribution of Na, Mg, Al, Si, P, S, Cl, K, Ca, Mn, Fe, Zn, As, Br, Rb, Sr, Cd and Pb have been quantitatively resolved in roots and rhizomes of an obligate wetland plant species, Typha latifolia, treated with a mixture of 100 μM each of As, Cd and Pb, together. The highest concentrations of As, Cd and Pb were found in the roots of the T. latifolia, with tissue-specific distributions. The As was detected in the root rhizodermis, and in the rhizome the majority of the As was within the vascular tissues, which indicates the high mobility of As within T. latifolia. The Cd was detected in the root exodermis, and in the vascular bundle and epidermis of the rhizome. The highest Pb concentrations were detected in the root rhizodermis and exodermis, and in the epidermis of the rhizome. These data represent an essential step in the resolution of fundamental questions in plant ionomics

  1. Evaluation of the Anti-plasmodial Activity of the Methanolic Root Extracts of Anthocleista nobilis G. Don, Nauclea latifolia Smith and Napoleona imperialis P. Beauv

    OpenAIRE

    Ijeoma H. Ogbuehi; Omotayo O. Ebong; Eme O. Asuquo; Chijioke A. Nwauche

    2014-01-01

    The emergence of resistant strains of the malaria parasite has necessitated the continued search for other effective, safe and cheap plant-based anti-malarial agents. This study was carried out to evaluate in vivo the anti-plasmodial effect of the extract of a combination of three plants as used in traditional medicine in South-east, Nigeria. Dried and ground roots of the three plants: Anthocleista nobilis, Nauclea latifolia and Napoleona imperialis were extracted in 70% methanol as a combina...

  2. The fate of arsenic, cadmium and lead in Typha latifolia: A case study on the applicability of micro-PIXE in plant ionomics

    Energy Technology Data Exchange (ETDEWEB)

    Lyubenova, Lyudmila [Helmholtz Zentrum München, German Research Centre for Environmental Health, Department of Environmental Sciences, Research Unit Microbe–Plant Interactions, Ingolstädter Landstr. 1, D-85764 Neuherberg (Germany); Pongrac, Paula; Vogel-Mikuš, Katarina [University of Ljubljana, Biotechnical Faculty, Department of Biology, Večna pot 111, SI-1000 Ljubljana (Slovenia); Mezek, Gašper Kukec; Vavpetič, Primož; Grlj, Nataša [Jožef Stefan Institute, Jamova 39, SI-1000 Ljubljana (Slovenia); Regvar, Marjana [University of Ljubljana, Biotechnical Faculty, Department of Biology, Večna pot 111, SI-1000 Ljubljana (Slovenia); Pelicon, Primož [Jožef Stefan Institute, Jamova 39, SI-1000 Ljubljana (Slovenia); Schröder, Peter, E-mail: peter.schroeder@helmholtz-muenchen.de [Helmholtz Zentrum München, German Research Centre for Environmental Health, Department of Environmental Sciences, Research Unit Microbe–Plant Interactions, Ingolstädter Landstr. 1, D-85764 Neuherberg (Germany)

    2013-03-15

    Highlights: ► Uptake, accumulation and distribution of multi-elemental pollution. ► Quantitative analysis of the spatal distribution of nutrients in roots and rhizomes. ► Typha latifolia – plant species important for phytoremediation of hazardous xenobiotics. ► Low amounts of Cd and Pb in the inner tissues of roots and rhizomes. ► Predominantly As was found within the vascular tissue – high mobility of the element. -- Abstract: Understanding the uptake, accumulation and distribution of toxic elements in plants is crucial to the design of effective phytoremediation strategies, especially in the case of complex multi-element pollution. Using micro-proton induced X-ray emission, the spatial distribution of Na, Mg, Al, Si, P, S, Cl, K, Ca, Mn, Fe, Zn, As, Br, Rb, Sr, Cd and Pb have been quantitatively resolved in roots and rhizomes of an obligate wetland plant species, Typha latifolia, treated with a mixture of 100 μM each of As, Cd and Pb, together. The highest concentrations of As, Cd and Pb were found in the roots of the T. latifolia, with tissue-specific distributions. The As was detected in the root rhizodermis, and in the rhizome the majority of the As was within the vascular tissues, which indicates the high mobility of As within T. latifolia. The Cd was detected in the root exodermis, and in the vascular bundle and epidermis of the rhizome. The highest Pb concentrations were detected in the root rhizodermis and exodermis, and in the epidermis of the rhizome. These data represent an essential step in the resolution of fundamental questions in plant ionomics.

  3. Distribución y uso tradicional de Sagittaria macrophylla Zucc. y S. latifolia Willd. en el Estado de México

    Directory of Open Access Journals (Sweden)

    Carmen Zepeda Gómez

    2005-01-01

    Full Text Available Sagittaria macrophylla y S. latifolia son plantas acuáticas emergentes que crecen en las orillas y zonas poco profundas de los cuerpos de agua limpios y de poca corriente. La primera es endémica de México, su distribución se restringe a la región del río Lerma y valle de México y está en peligro de extinción. Sagittarial latifolia se distribuye desde Canadá hasta el noroeste de Sudamérica. En México se localiza al menos en 11 estados. El análisis de la distribución de ambas especies muestra una disminución en el Estado de México; los factores que aparentemente están contribuyendo a este fenómeno son, en general, la explosión demográfica, la pérdida del hábitat y la sobreexplotación. No había registros del uso de S. latifolia en México, actualmente se reconoce que sus tubérculos o ‘papas de agua’ tienen importancia económica en la región del río Lerma. El uso tradicional de ambas especies indica que podrían ser una alternativa más en la dieta humana y animal.

  4. Leaf gas exchange and fluorescence of Phillyrea latifolia, Pistacia lentiscus and Quercus ilex saplings in severe drought and high temperature conditions

    International Nuclear Information System (INIS)

    Filella, I.; Llusià, J.; Pinol, J.; Peñuelas, J.

    1998-01-01

    Saplings of Phillyrea latifolia, Pistacia lentiscus and Quercus ilex were withheld watering for 7 days, followed by reirrigation. Incident photosynthetic photon flux density (PPFD), leaf temperature, net photosynthetic rates, stomatal conductance, and photochemical efficiency of the photosystem II (ΔF/F'm) were measured three times during the day. The watered plants had higher photosynthetic rates, stomatal conductances, ΔF/F'm and ETR than non-watered plants. However, watered plants were mildly water stressed as shown by low ratio of variable to maximal fluorescence (Fv/Fm) and high non-photochemical fluorescence quenching (qN). Their ΔF/F′m was low in the morning and increased in the evening, following the variations in PPFD. Watered plants of Q. ilex had lower photosynthetic activity, stomatal conductance and photosynthetic radiation use efficiency than Ph. latifolia and P. lentiscus, and, conversely, reached the highest ΔF/F′m and ETR. This seems to indicate a different relationship between photosynthetic activity and electron transport rate in Q. ilex compared to the other two species. Ph. latifolia and P. lentiscus appeared to be better adapted to severe drought than Q. ilex. (author)

  5. On flavonoid accumulation in different plant parts: Variation patterns among individuals and populations in the shore campion (Silene littorea.

    Directory of Open Access Journals (Sweden)

    Jose Carlos Del Valle

    2015-10-01

    Full Text Available The presence of anthocyanins in flowers and fruits is frequently attributed to attracting pollinators and dispersers. In vegetative organs, anthocyanins and other non-pigmented flavonoids such as flavones and flavonols may serve protective functions against UV radiation, cold, heat, drought, salinity, pathogens and herbivores; thus, these compounds are usually produced as a plastic response to such stressors. Although the independent accumulation of anthocyanins in reproductive and vegetative tissues is commonly postulated due to differential regulation, the accumulation of flavonoids within and among populations has never been thoroughly compared. Here, we investigated the shore campion (Silene littorea, Caryophyllaceae which exhibits variation in anthocyanin accumulation in its floral and vegetative tissues. We examined the in-situ accumulation of flavonoids in floral (petals and calyxes and vegetative organs (leaves from 18 populations representing the species’ geographic distribution. Each organ exhibited considerable variability in the content of anthocyanins and other flavonoids both within and among populations. In all organs, anthocyanin and other flavonoids were correlated. At the plant level, the flavonoid content in petals, calyxes and leaves was not correlated in most of the populations. However, at the population level, the mean amount of anthocyanins in all organs was positively correlated, which suggests that the variable environmental conditions of populations may play a role in anthocyanin accumulation. These results are unexpected because the anthocyanins are usually constitutive in petals, yet contingent to environmental conditions in calyxes and leaves. Anthocyanin variation in petals may influence pollinator attraction and subsequent plant reproduction, yet the amount of anthocyanins may be a direct response to environmental factors. In populations on the west coast, a general pattern of increasing accumulation of

  6. Pearsonema (syn Capillaria plica associated cystitis in a Fennoscandian arctic fox (Vulpes lagopus: a case report

    Directory of Open Access Journals (Sweden)

    Osterman-Lind Eva

    2010-06-01

    Full Text Available Abstract The bladderworm Pearsonema (syn Capillaria plica affects domestic dogs and wild carnivores worldwide. A high prevalence in red foxes (Vulpes vulpes has been reported in many European countries. P. plica inhabits the lower urinary tract and is considered to be of low pathogenic significance in dogs mostly causing asymptomatic infections. However, a higher level of pathogenicity has been reported in foxes. A severe cystitis associated with numerous bladderworms was found in a captive arctic fox (Vulpes lagopus originating from the endangered Fennoscandian arctic fox population. To our knowledge this is the first description of P. plica infection in an arctic fox.

  7. Retrieving SW fluxes from geostationary narrowband radiances for the NASA-CERES SYN1deg product

    Science.gov (United States)

    Wrenn, F. J., IV; Doelling, D. R.; Liang, L.

    2017-12-01

    The CERES mission was designed to measure the natural variability of the net TOA flux over long time scales relevant to climate monitoring. To achieve this goal, CERES provides the level-3 SSF1deg, SYN1deg, and EBAF monthly 1° by 1° regional TOA flux. The single satellite (Terra or Aqua) SSF1deg 24-hour shortwave flux is based on one daytime measurements and assumes constant meteorology to model the diurnal change in albedo. To accurately describe regions with a prominent diurnal signal, the SYN1deg Edition4 dataset employs hourly geostationary (GEO) measurements. This improves upon Edition3, which used 3-hourly GEO measurements and with temporal interpolation. The EBAF product combines the temporal stability of the SSF1deg product with the diurnal information from SYN1deg and removes the CERES instrument calibration bias by constraining the net flux balance to the ocean heat storage term. The SYN-1deg product retrieves hourly SW fluxes from GEO measurements. Over regions with large diurnal cycles, such as maritime stratus and land afternoon convective locations, the GEO derived SW fluxes will capture the diurnal flux not observed with Terra or Aqua sun-synchronous satellites. Obtaining fluxes from geostationary satellite radiance is a multistep process. First, most GEO visible imagers lack calibration and must be calibrated to MODIS and VIIRS. Second, the GEO imager visible channel radiances are converted to broadband radiances using empirical and theoretical models. The lack of coincident, collocated, and co-angled GEO and CERES measurements makes building an empirical model difficult. The narrowband to broadband models are a function of surface and cloud conditions, which are difficult to identify due to the inconsistent cloud retrievals between the 16 GEO imagers used in the CERES record. Third, the GEO derived broadband radiances are passed through the CERES angular distribution model (ADM) to convert the radiances to fluxes. Lastly, the GEO derived

  8. Disruption of hippocampus-regulated behavioural and cognitive processes by heterozygous constitutive deletion of SynGAP.

    Science.gov (United States)

    Muhia, Mary; Yee, Benjamin K; Feldon, Joram; Markopoulos, Foivos; Knuesel, Irene

    2010-02-01

    The brain-specific Ras/Rap-GTPase activating protein (SynGAP) is a prime candidate linking N-methyl-d-aspartate receptors to the regulation of the ERK/MAP kinase signalling cascade, suggested to be essential for experience-dependent synaptic plasticity. Here, we evaluated the behavioural phenotype of SynGAP heterozygous knockout mice (SG(+/-)), expressing roughly half the normal levels of SynGAP. In the cognitive domain, SG(+/-) mice demonstrated severe working and reference memory deficits in the radial arm maze task, a mild impairment early in the transfer test of the water maze task, and a deficiency in spontaneous alternation in an elevated T-maze. In the non-cognitive domain, SG(+/-) mice were hyperactive in the open field and appeared less anxious in the elevated plus maze test. In contrast, object recognition memory performance was not impaired in SG(+/-) mice. The reduction in SynGAP thus resulted in multiple behavioural traits suggestive of aberrant cognitive and non-cognitive processes normally mediated by the hippocampus. Immunohistochemical evaluation further revealed a significant reduction in calbindin-positive interneurons in the hippocampus and doublecortin-positive neurons in the dentate gyrus of adult SG(+/-) mice. Heterozygous constitutive deletion of SynGAP is therefore associated with notable behavioural as well as morphological phenotypes indicative of hippocampal dysfunction. Any suggestion of a possible causal link between them however remains a matter for further investigation.

  9. Astrocyte-specific disruption of SynCAM1 signaling results in ADHD-like behavioral manifestations.

    Directory of Open Access Journals (Sweden)

    Ursula S Sandau

    Full Text Available SynCAM1 is an adhesion molecule involved in synaptic differentiation and organization. SynCAM1 is also expressed in astroglial cells where it mediates astrocyte-to astrocyte and glial-neuronal adhesive communication. In astrocytes, SynCAM1 is functionally linked to erbB4 receptors, which are involved in the control of both neuronal/glial development and mature neuronal and glial function. Here we report that mice carrying a dominant-negative form of SynCAM1 specifically targeted to astrocytes (termed GFAP-DNSynCAM1 mice exhibit disrupted diurnal locomotor activity with enhanced and more frequent episodes of activity than control littermates during the day (when the animals are normally sleeping accompanied by shorter periods of rest. GFAP-DNSynCAM1 mice also display high levels of basal activity in the dark period (the rodent's awake/active time that are attenuated by the psychostimulant D,L-amphetamine, and reduced anxiety levels in response to both avoidable and unavoidable provoking stimuli. These results indicate that disruption of SynCAM1-dependent astroglial function results in behavioral abnormalities similar to those described in animals model of attention-deficit hyperactive disorder (ADHD, and suggest a hitherto unappreciated contribution of glial cells to the pathophysiology of this disorder.

  10. Ultraviolet-B (280-320 nm) absorbing pigments in the leaves of Silene vulgaris: their role in UV-B tolerance

    Energy Technology Data Exchange (ETDEWEB)

    Staaij, J.W.M. van de; Ernst, W. H.O.; Hakvoort, H. W.J.; Rozema, J. [Vrije Univ., Amsterdam (Netherlands)

    1995-07-01

    The UV-B radiation tolerant perennial herb Silene vulgaris was tested on the influence of incident UV-B fluxes during growth on the synthesis of UV-B absorbing pigments in the leaves. Analysis of methanolic leaf extracts showed a stimulating effect of UV-B on the absorbing ability of leaf extracts. HPLC analysis made clear that UV-B radiation stimulated extractable flavonoid concentrations in leaves, but that UV-B absorption could only be partly attributed to these flavonoids. The contribution of flavonoids to UV-B absorption diminishes if plants mature. Other possible functions of flavonoids in plants growing under elevated UV-B conditions are discussed. (author)

  11. Ultraviolet-B (280-320 nm) absorbing pigments in the leaves of Silene vulgaris: their role in UV-B tolerance

    International Nuclear Information System (INIS)

    Staaij, J.W.M. van de; Ernst, W.H.O.; Hakvoort, H.W.J.; Rozema, J.

    1995-01-01

    The UV-B radiation tolerant perennial herb Silene vulgaris was tested on the influence of incident UV-B fluxes during growth on the synthesis of UV-B absorbing pigments in the leaves. Analysis of methanolic leaf extracts showed a stimulating effect of UV-B on the absorbing ability of leaf extracts. HPLC analysis made clear that UV-B radiation stimulated extractable flavonoid concentrations in leaves, but that UV-B absorption could only be partly attributed to these flavonoids. The contribution of flavonoids to UV-B absorption diminishes if plants mature. Other possible functions of flavonoids in plants growing under elevated UV-B conditions are discussed. (author)

  12. Effects of SYN1Q555X mutation on cortical gray matter microstructure.

    Science.gov (United States)

    Cabana, Jean-François; Gilbert, Guillaume; Létourneau-Guillon, Laurent; Safi, Dima; Rouleau, Isabelle; Cossette, Patrick; Nguyen, Dang Khoa

    2018-04-19

    A new Q555X mutation on the SYN1 gene was recently found in several members of a family segregating dyslexia, epilepsy, and autism spectrum disorder. To describe the effects of this mutation on cortical gray matter microstructure, we performed a surface-based group study using novel diffusion and quantitative multiparametric imaging on 13 SYN1 Q555X mutation carriers and 13 age- and sex-matched controls. Specifically, diffusion kurtosis imaging (DKI) and neurite orientation and dispersion and density imaging (NODDI) were used to analyze multi-shell diffusion data and obtain parametric maps sensitive to tissue structure, while quantitative metrics sensitive to tissue composition (T1, T2* and relative proton density [PD]) were obtained from a multi-echo variable flip angle FLASH acquisition. Results showed significant microstructural alterations in several regions usually involved in oral and written language as well as dyslexia. The most significant changes in these regions were lowered mean diffusivity and increased fractional anisotropy. This study is, to our knowledge, the first to successfully use diffusion imaging and multiparametric mapping to detect cortical anomalies in a group of subjects with a well-defined genotype linked to language impairments, epilepsy and autism spectrum disorder (ASD). © 2018 Wiley Periodicals, Inc.

  13. Vicariance, long-distance dispersal, and regional extinction-recolonization dynamics explain the disjunct circumpolar distribution of the arctic-alpine plant Silene acaulis.

    Science.gov (United States)

    Gussarova, Galina; Allen, Geraldine A; Mikhaylova, Yulia; McCormick, Laurie J; Mirré, Virginia; Marr, Kendrick L; Hebda, Richard J; Brochmann, Christian

    2015-10-01

    Many arctic-alpine species have vast geographic ranges, but these may encompass substantial gaps whose origins are poorly understood. Here we address the phylogeographic history of Silene acaulis, a perennial cushion plant with a circumpolar distribution except for a large gap in Siberia. We assessed genetic variation in a range-wide sample of 103 populations using plastid DNA (pDNA) sequences and AFLPs (amplified fragment length polymorphisms). We constructed a haplotype network and performed Bayesian phylogenetic analyses based on plastid sequences. We visualized AFLP patterns using principal coordinate analysis, identified genetic groups using the program structure, and estimated genetic diversity and rarity indices by geographic region. The history of the main pDNA lineages was estimated to span several glaciations. AFLP data revealed a distinct division between Beringia/North America and Europe/East Greenland. These two regions shared only one of 17 pDNA haplotypes. Populations on opposite sides of the Siberian range gap (Ural Mountains and Chukotka) were genetically distinct and appear to have resulted from postglacial leading-edge colonizations. We inferred two refugia in North America (Beringia and the southern Rocky Mountains) and two in Europe (central-southern Europe and northern Europe/East Greenland). Patterns in the East Atlantic region suggested transoceanic long-distance dispersal events. Silene acaulis has a highly dynamic history characterized by vicariance, regional extinction, and recolonization, with persistence in at least four refugia. Long-distance dispersal explains patterns across the Atlantic Ocean, but we found no evidence of dispersal across the Siberian range gap. © 2015 Botanical Society of America.

  14. The synaptic cell adhesion molecule, SynCAM1, mediates astrocyte-to-astrocyte and astrocyte-to-GnRH neuron adhesiveness in the mouse hypothalamus.

    Science.gov (United States)

    Sandau, Ursula S; Mungenast, Alison E; McCarthy, Jack; Biederer, Thomas; Corfas, Gabriel; Ojeda, Sergio R

    2011-06-01

    We previously identified synaptic cell adhesion molecule 1 (SynCAM1) as a component of a genetic network involved in the hypothalamic control of female puberty. Although it is well established that SynCAM1 is a synaptic adhesion molecule, its contribution to hypothalamic function is unknown. Here we show that, in addition to the expected neuronal localization illustrated by its presence in GnRH neurons, SynCAM1 is expressed in hypothalamic astrocytes. Cell adhesion assays indicated that SynCAM is recognized by both GnRH neurons and astrocytes as an adhesive partner and promotes cell-cell adhesiveness via homophilic, extracellular domain-mediated interactions. Alternative splicing of the SynCAM1 primary mRNA transcript yields four mRNAs encoding membrane-spanning SynCAM1 isoforms. Variants 1 and 4 are predicted to be both N and O glycosylated. Hypothalamic astrocytes and GnRH-producing GT1-7 cells express mainly isoform 4 mRNA, and sequential N- and O-deglycosylation of proteins extracted from these cells yields progressively smaller SynCAM1 species, indicating that isoform 4 is the predominant SynCAM1 variant expressed in astrocytes and GT1-7 cells. Neither cell type expresses the products of two other SynCAM genes (SynCAM2 and SynCAM3), suggesting that SynCAM-mediated astrocyte-astrocyte and astrocyte-GnRH neuron adhesiveness is mostly mediated by SynCAM1 homophilic interactions. When erbB4 receptor function is disrupted in astrocytes, via transgenic expression of a dominant-negative erbB4 receptor form, SynCAM1-mediated adhesiveness is severely compromised. Conversely, SynCAM1 adhesive behavior is rapidly, but transiently, enhanced in astrocytes by ligand-dependent activation of erbB4 receptors, suggesting that erbB4-mediated events affecting SynCAM1 function contribute to regulate astrocyte adhesive communication.

  15. Preliminary Screening of Antioxidant and Antibacterial Activities and Establishment of an Efficient Callus Induction in Curculigo latifolia Dryand (Lemba

    Directory of Open Access Journals (Sweden)

    Reza Farzinebrahimi

    2016-01-01

    Full Text Available Leaf, seed, and tuber explants of C. latifolia were inoculated on MS medium supplemented with various concentrations of BAP and IBA, alone or in combinations, to achieve in vitro plant regeneration. Subsequently, antioxidant and antibacterial activities were determined from in vitro and in vivo plant developed. No response was observed from seed culture on MS media with various concentrations of PGRs. The highest percentage of callus was observed on tuber explants (94% and leaf explants (89% when cultured on MS media supplemented with IBA in combination with BAP. A maximum of 88% shoots per tuber explant, with a mean number of shoots (8.8±1.0, were obtained on MS medium supplemented with combinations of BAP and IBA (2.5 mg L−1. The best root induction (92% and mean number (7.6±0.5 from tuber explants were recorded on 2.5 mg L−1 IBA alone supplemented to MS medium. The higher antioxidant content (80% was observed from in vivo tuber. However, tuber part from the intact plant showed higher inhibition zone in antibacterial activity compared to other in vitro and in vivo tested parts.

  16. Effect of irrigation and fertilization on crop yield and fruit quality of the Tahiti lime Citrus latifolia Tanaka (Rutaceae

    Directory of Open Access Journals (Sweden)

    Diana Dorado Guerra

    2015-01-01

    Full Text Available In a seven years old citrus grove of Tahiti lime Citrus latifolia Tanaka (Rutaceae located in El Espinal, Tolima, Colombia, which has a predominantly negative water balance throughout the year, we evaluated the effect of irrigation and fertilization on yield and fruit quality in 2009 and 2011. Trees were subjected to three levels of water based on the evapotranspiration reference (ETo: L1=100 %, L2=70 % and L3=50 %. We applied three nitrogen treatments: N1=nitrogen required by the nutritional balance, N2=twice the level of nitrogen used in N1, and N3=fertilizer application used by the common farmer. We evaluated the performance, fruit weight, polar and equatorial diameter of fruit, shell thickness, weight and percentage of juice, acidity, soluble solids and vitamin C. The experiment was conducted under a randomized complete block design in a split plot arrangement; the variance and means of the data were statistically analyzed with SAS. And optimal response is between irrigation and fruit quality interaction was obtained with irrigation L1 and fertilization N2. We obtained the highest values in the response variables when the highest amount of water was applied L1, regardless of fertilizer applications, indicating that a lower water supply not only affects the performance of the plant, but also the quality of the fruit, minimizing market opportunities.

  17. Impacts of the physiochemical properties of chlorinated solvents on the sorption of trichloroethylene to the roots of Typha latifolia

    Energy Technology Data Exchange (ETDEWEB)

    Ma Xingmao [Department of Civil and Environmental Engineering, Southern Illinois University Carbondale, 1230 Lincoln Drive, Carbondale, IL 62901 (United States)], E-mail: ma@engr.siu.edu; Wang Chen [Department of Civil and Environmental Engineering, Southern Illinois University Carbondale, 1230 Lincoln Drive, Carbondale, IL 62901 (United States)

    2009-03-15

    Sorption to plant roots is the first step for organic contaminants to enter plant tissues. Mounting evidence is showing that sorption to plant roots is nonlinear and competitive. The objective of this study was to investigate the effects of physiochemical properties of homologous chlorinated ethenes and ethanes on the competitive sorption of trichloroethylene (TCE) to the roots of Typha latifolia (cattail). The results showed that chlorinated ethenes exerted significantly stronger competition on the sorption of TCE than chlorinated ethanes. Individual physiochemical properties of organic compounds could be related to the competitive capacity of chlorinated ethenes, but the roles appeared secondary, with molecular structures showing primary effects. Based on these observations, a two-step sorption mechanism was proposed, consisting of the interactions between organic compounds and functional groups on the root surface and subsequent pore filling and absorption to the hydrophobic domains in the composition of roots. - Molecular structures and physiochemical properties of homologous chlorinated aliphatics are important factors affecting competitive sorption of TCE to plant roots.

  18. Impacts of the physiochemical properties of chlorinated solvents on the sorption of trichloroethylene to the roots of Typha latifolia

    International Nuclear Information System (INIS)

    Ma Xingmao; Wang Chen

    2009-01-01

    Sorption to plant roots is the first step for organic contaminants to enter plant tissues. Mounting evidence is showing that sorption to plant roots is nonlinear and competitive. The objective of this study was to investigate the effects of physiochemical properties of homologous chlorinated ethenes and ethanes on the competitive sorption of trichloroethylene (TCE) to the roots of Typha latifolia (cattail). The results showed that chlorinated ethenes exerted significantly stronger competition on the sorption of TCE than chlorinated ethanes. Individual physiochemical properties of organic compounds could be related to the competitive capacity of chlorinated ethenes, but the roles appeared secondary, with molecular structures showing primary effects. Based on these observations, a two-step sorption mechanism was proposed, consisting of the interactions between organic compounds and functional groups on the root surface and subsequent pore filling and absorption to the hydrophobic domains in the composition of roots. - Molecular structures and physiochemical properties of homologous chlorinated aliphatics are important factors affecting competitive sorption of TCE to plant roots

  19. Comparative study of bio-ethanol production from mahula (Madhuca latifolia L.) flowers by Saccharomyces cerevisiae and Zymomonas mobilis

    Energy Technology Data Exchange (ETDEWEB)

    Behera, Shuvashish; Mohanty, Rama Chandra [Department of Botany, Utkal University, Vanivihar, Bhubaneswar 751004, Orissa (India); Ray, Ramesh Chandra [Microbiology Laboratory, Central Tuber Crops Research Institute (Regional Centre), Bhubaneswar 751019, Orissa (India)

    2010-07-15

    Mahula (Madhuca latifolia L.) flower is a suitable alternative cheaper carbohydrate source for production of bio-ethanol. Recent production of bio-ethanol by microbial fermentation as an alternative energy source has renewed research interest because of the increase in the fuel price. Saccharomyces cerevisiae (yeast) and Zymomonas mobilis (bacteria) are two most widely used microorganisms for ethanol production. In this study, experiments were carried out to compare the potential of the yeast S. cerevisiae (CTCRI strain) with the bacterium Z. mobilis (MTCC 92) for ethanol fermentation from mahula flowers. The ethanol production after 96 h fermentation was 149 and 122.9 g kg{sup -1} flowers using free cells of S. cerevisiae and Z. mobilis, respectively. The S. cerevisiae strain showed 21.2% more final ethanol production in comparison to Z. mobilis. Ethanol yield (Yx/s), volumetric product productivity (Qp), sugar to ethanol conversion rate (%) and microbial biomass concentration (X) obtained by S. cerevisiae were found to be 5.2%, 21.1%, 5.27% and 134% higher than Z. mobilis, respectively after 96 h of fermentation. (author)

  20. Comparative study of bio-ethanol production from mahula (Madhuca latifolia L.) flowers by Saccharomyces cerevisiae and Zymomonas mobilis

    International Nuclear Information System (INIS)

    Behera, Shuvashish; Mohanty, Rama Chandra; Ray, Ramesh Chandra

    2010-01-01

    Mahula (Madhuca latifolia L.) flower is a suitable alternative cheaper carbohydrate source for production of bio-ethanol. Recent production of bio-ethanol by microbial fermentation as an alternative energy source has renewed research interest because of the increase in the fuel price. Saccharomyces cerevisiae (yeast) and Zymomonas mobilis (bacteria) are two most widely used microorganisms for ethanol production. In this study, experiments were carried out to compare the potential of the yeast S. cerevisiae (CTCRI strain) with the bacterium Z. mobilis (MTCC 92) for ethanol fermentation from mahula flowers. The ethanol production after 96 h fermentation was 149 and 122.9 g kg -1 flowers using free cells of S. cerevisiae and Z. mobilis, respectively. The S. cerevisiae strain showed 21.2% more final ethanol production in comparison to Z. mobilis. Ethanol yield (Yx/s), volumetric product productivity (Qp), sugar to ethanol conversion rate (%) and microbial biomass concentration (X) obtained by S. cerevisiae were found to be 5.2%, 21.1%, 5.27% and 134% higher than Z. mobilis, respectively after 96 h of fermentation. (author)

  1. Evaluation of Anti-Inflammatory Activity of Citrus latifolia Tanaka Essential Oil and Limonene in Experimental Mouse Models

    Directory of Open Access Journals (Sweden)

    Raquel Kummer

    2013-01-01

    Full Text Available The genus Citrus (Rutaceae includes several species of plants that produce some of the most cultivated fruits in the world, providing an appreciable content of essential oil. In folk medicine, they are used as a cholagogue, antipyretic, anti-inflammatory, sedative, and antitoxic effects. Lemon essential oil has been used since ancient times for its antiseptic, carminative, diuretic, and eupeptic effects. In this study, we investigated the anti-inflammatory activity of Citrus latifolia Tanaka essential oil (CLEO and its main constituent LIM. In the cell viability assay, CLEO and LIM (3, 10, 30, and 90 μg/mL had low cytotoxicity. In zymosan-induced peritonitis, LIM (500 mg/kg decreased the infiltration of peritoneal exudate leukocytes and decreased the number of polymorphonuclear leukocytes. In vitro chemotaxis revealed that CLEO and LIM (1, 3, and 10 µg/mL promoted a significant reduction of neutrophil migration toward fMLP and LTB4. LIM (500 mg/kg also reduced TNF-α levels but did not alter IL-10 levels in the peritoneal exudate. In conclusion, this study showed that LIM isolated from CLEO had potential anti-inflammatory effects, likely by inhibiting proinflammatory mediators present in inflammatory exudate and leukocyte chemotaxis.

  2. U-Pb zircon dating of the Bassies granite (Pyrenees): a syn-tectonic pluton of Westphalian age

    International Nuclear Information System (INIS)

    Paquette, J.L.

    1997-01-01

    A new U-Pb zircon age of 312 ± 2 Ma for the Bassies pluton (Pyrenees) contradicts the previous whole-rock Rb-Sr dating at 276 ± 16 Ma, which was considered as the age of emplacement, therefore regarded as post-tectonic. The new date is in agreement with recent structural studies which suggest a Hercynian syn-tectonic emplacement for the Bassies pluton. These results strengthen the few U-Pb ages already published for the Pyrenean granites and indicate that the Hercynian plutonism of the Pyrenees is essentially Carboniferous in age and syn-tectonic. (authors)

  3. An Analysis of Sawtooth Noise in the Timing SynPaQ III GPS Sensor

    Directory of Open Access Journals (Sweden)

    Yuriy S. SHMALIY

    2007-05-01

    Full Text Available This paper addresses a probabilistic analysis of sawtooth noise in the one pulse per second (1PPS output of the timing SynPaQ III GPS Sensor. We show that sawtooth noise is uniformly distributed within the bounds caused by period of the Local Time Clock of the sensor and that the probability density function (pdf of this noise is formed with 1ns sampling interval used in the sensor to calculate the negative sawtooth. We also show that the pdf has at zero a spike of 1ns width caused by roll-off. It is demonstrated that an unbiased finite impulse response filter is an excellent suppresser of such a noise in the estimates of the time interval errors of local clocks.

  4. Assisted phytoremediation of heavy metal contaminated soil from a mined site with Typha latifolia and Chrysopogon zizanioides.

    Science.gov (United States)

    Anning, Alexander Kofi; Akoto, Ruth

    2018-02-01

    Chemically assisted phytoremediation is fast gaining attention as a biotechnology to accelerate heavy metal removal from contaminated substrates, but how different chemical amendments affect the process remains an important research question. Here, bioaccumulation factor (BAF), translocation factor (TF), removal efficiency (RE) and uptake of Hg, As, Pb, Cu and Zn by cattail (Typha latifolia) and vetiver (Chrysopogon zizanioides) were quantified in a potted experiment to determine the effects of amendments on the phytoremediation success. Baseline concentrations of heavy metals within the studied mined site were determined. The experiment involved three soil treatments (each comprising 16 samples amended with 0.05mol/L ethylene di-aminetetraacetic acid (EDTA), 3g of aluminum sulfate [Al 2 (SO 4 ) 3 ], and unamended control) transplanted with equal numbers of vetiver and cattail. Growth performance (height) of plant species was monitored every two weeks. Sixteen weeks after transplanting, heavy metal levels in plant and soil samples were quantified following standard protocols, and the biomass and root length measured for each plant species. Results indicated strong negative impact of mining activities on heavy metal levels of soil in the study area. Soil amendment considerably enhanced the BAF, TF, RE and uptake but the effect varied with plant species and heavy metal in question. The amendment also stimulated strong positive correlation between RE and BAF, TF and metal uptake, and generally did not show any negative effects on plant growth performance. In general, soil amendment aided the accumulation and translocation of heavy metals in the plant species studied, and could be explored for cleaning up contaminated sites. Copyright © 2017 Elsevier Inc. All rights reserved.

  5. Diseño de un humedal para la remoción de cd, as y cr con plantas de typha latifolia (Espadaña)

    OpenAIRE

    Tejeda González, Juan Carlos

    2010-01-01

    El presente trabajo forma parte de los estudios que realizó la Facultad de Ciencias Químicas y el Posgrado Multidisciplinario de Ciencias Ambientales de la UASLP (Carranza, et al, 2005; Carranza, 2005; Alonso, 2005; Pecina, 2008; Leura, 2009) con la finalidad de estudiar la capacidad de las plantas de Typha latifolia para sobrevivir en ambientes acuáticos contaminados con metales pesados y arsénico, así como estudiar la factibilidad de utilizar a esta planta en procesos de fito...

  6. Efecto de precursores y reguladores de crecimiento en la formación de brotes adventicios a partir de explantes de limón persa (Citrus latifolia).

    OpenAIRE

    Pérez Luna, Adriana Isabel

    2013-01-01

    En México, la citricultura se ha visto afectada por diferentes plagas y enfermedades, ocasionando grandes daños en la producción. Limón persa (Citrus latifolia Tan.) por ser un cítrico agrio está catalogado como una especie susceptible a una de las enfermedades más devastadoras como lo es el Huanglongbing (HLB). Una alternativa viable es el desarrollo de plantas transgénicas resistentes a enfermedades. Para ello se requiere un protocolo eficiente de brotación adventicia. En este estudio se c...

  7. SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations

    NARCIS (Netherlands)

    von Eichborn, J.; Dunkel, M.; Gohlke, B.O.; Preissner, S.C.; Hoffmann, M.F.; Bauer, J.M.J.; Armstrong, J.D.; Schaefer, M.H.; Andrade-Navarro, M.A.; Le Novere, N.; Croning, M.D.R.; Grant, S.G.N.; van Nierop, P.; Smit, A.B.; Preissner, R.

    2013-01-01

    We created SynSysNet, available online at http://bioinformatics.charite.de/ synsysnet, to provide a platform that creates a comprehensive 4D network of synaptic interactions. Neuronal synapses are fundamental structures linking nerve cells in the brain and they are responsible for neuronal

  8. A synthetic cadmium metallothionein gene (PMCd1syn) of Paramecium species: expression, purification and characteristics of metallothionein protein.

    Science.gov (United States)

    Dar, Saira; Shuja, Rukhsana N; Shakoori, Abdul Rauf

    2013-02-01

    Metallothioneins (MTs) are metal binding proteins that are rich in cysteine residues constituting 10-30 % of the total protein, and in which the thiol groups bind to the metal ions. The increasing amount of metal ions in the medium have shown increased production of MTs by different organisms such as bacteria, protozoa and mammals like humans. PMCd1 is the first gene ever discovered in Paramecium, a ciliated protozoan, that could produce this MT in response to cadmium. In this study the PMCd1syn gene has been cloned in pET41a expression vector and expressed in an Escherichia coli BL21-codonplus strain for the first time. Since the gene PMCd1 amplified from Paramecium contained 10 codons, which could act as stop codons during expression in E. coli, this gene of 612 bps was synthesized to substitute these (stop) codons for the Paramecium sp. specific amino acids. For stability of the expressed protein, glutathione-S-transferase gene was fused with PMCd1syn gene and coexpressed. The cells expressing PMCd1syn demonstrated increased accumulation of cadmium. This is the first report of cadmium MT protein expressed from Paramecium species, particularly from synthetic MT gene (PMCd1syn). This fusion protein, the molecular weight of which has been confirmed to be 53.03 kDa with MALDI analysis, is rich in cysteine residues, and has been shown for the first time in this ciliate to bind to and sequester Cd(2+)-ions.

  9. Optimization of cultivation conditions for biotechnological production of lipid by Rhodotorula kratochvilovae (syn, Rhodosporidium kratochvilovae) SY89 for biodiesel preparation

    NARCIS (Netherlands)

    Jiru, Tamene Milkessa; Groenewald, Marizeth; Pohl, Carolina; Steyn, Laurinda; Kiggundu, Nicholas; Abate, Dawit

    Rhodotorula kratochvilovae (syn, Rhodosporidium kratochvilovae) SY89, an oleaginous yeast, isolated from Ethiopian soil, was grown under nitrogen-limited media. The capacity this with respect to biomass production, lipid yield and lipid content was evaluated. The influence of inoculum size, carbon

  10. Nonclinical Safety Assessment of SYN-004: An Oral β-lactamase for the Protection of the Gut Microbiome From Disruption by Biliary-Excreted, Intravenously Administered Antibiotics.

    Science.gov (United States)

    Kokai-Kun, John F; Bristol, J Andrew; Setser, John; Schlosser, Michael

    2016-05-01

    SYN-004 is a first in class, recombinant β-lactamase that degrades β-lactam antibiotics and has been formulated to be administered orally to patients receiving intravenous β-lactam antibiotics including cephalosporins. SYN-004 is intended to degrade unmetabolized antibiotics excreted into the intestines and thus has the potential to protect the gut microbiome from disruption by these antibiotics. Protection of the gut microbiome is expected to protect against opportunistic enteric infections such as Clostridium difficile infection as well as antibiotic-associated diarrhea. In order to demonstrate that oral SYN-004 is safe for human clinical trials, 2 Good Laboratory Practice-compliant toxicity studies were conducted in Beagle dogs. In both studies, SYN-004 was administered orally 3 times per day up to the maximum tolerated dose of the formulation. In the first study, doses of SYN-004 administered over 28 days were safe and well tolerated in dogs with the no-observed-adverse-effect level at the high dose of 57 mg/kg/day. Systemic absorption of SYN-004 was minimal and sporadic and showed no accumulation during the study. In the second study, doses up to 57 mg/kg/day were administered to dogs in combination with an intravenous dose of ceftriaxone (300 mg/kg) given once per day for 14 days. Coadministration of oral SYN-004 with intravenous ceftriaxone was safe and well tolerated, with SYN-004 having no noticeable effect on the plasma pharmacokinetics of ceftriaxone. These preclinical studies demonstrate that SYN-004 is well tolerated and, when coadministered with ceftriaxone, does not interfere with its systemic pharmacokinetics. These data supported advancing SYN-004 into human clinical trials. © The Author(s) 2015.

  11. Multi-ingredients determination and fingerprint analysis of leaves from Ilex latifolia using ultra-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry.

    Science.gov (United States)

    Fan, Chunlin; Deng, Jiewei; Yang, Yunyun; Liu, Junshan; Wang, Ying; Zhang, Xiaoqi; Fai, Kuokchiu; Zhang, Qingwen; Ye, Wencai

    2013-10-01

    An ultra-performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (UPLC-QTOF-MS) method integrating multi-ingredients determination and fingerprint analysis has been established for quality assessment and control of leaves from Ilex latifolia. The method possesses the advantages of speediness, efficiency, accuracy, and allows the multi-ingredients determination and fingerprint analysis in one chromatographic run within 13min. Multi-ingredients determination was performed based on the extracted ion chromatograms of the exact pseudo-molecular ions (with a 0.01Da window), and fingerprint analysis was performed based on the base peak chromatograms, obtained by negative-ion electrospray ionization QTOF-MS. The method validation results demonstrated our developed method possessing desirable specificity, linearity, precision and accuracy. The method was utilized to analyze 22 I. latifolia samples from different origins. The quality assessment was achieved by using both similarity analysis (SA) and principal component analysis (PCA), and the results from SA were consistent with those from PCA. Our experimental results demonstrate that the strategy integrated multi-ingredients determination and fingerprint analysis using UPLC-QTOF-MS technique is a useful approach for rapid pharmaceutical analysis, with promising prospects for the differentiation of origin, the determination of authenticity, and the overall quality assessment of herbal medicines. Copyright © 2013 Elsevier B.V. All rights reserved.

  12. Genetic variation of lodgepole pine, Pinus contorta var. latifolia, chemical and physical defenses that affect mountain pine beetle, Dendroctonus ponderosae, attack and tree mortality.

    Science.gov (United States)

    Ott, Daniel S; Yanchuk, Alvin D; Huber, Dezene P W; Wallin, Kimberly F

    2011-09-01

    Plant secondary chemistry is determined by both genetic and environmental factors, and while large intraspecific variation in secondary chemistry has been reported frequently, the levels of genetic variation of many secondary metabolites in forest trees in the context of potential resistance against pests have been rarely investigated. We examined the effect of tree genotype and environment/site on the variation in defensive secondary chemistry of lodgepole pine, Pinus contorta var. latifolia, against the fungus, Grosmannia clavigera (formerly known as Ophiostoma clavigerum), associated with the mountain pine beetle, Dendroctonus ponderosae. Terpenoids were analyzed in phloem samples from 887, 20-yr-old trees originating from 45 half-sibling families planted at two sites. Samples were collected both pre- and post-inoculation with G. clavigera. Significant variation in constitutive and induced terpenoid compounds was attributed to differences among families. The response to the challenge inoculation with G. clavigera was strong for some individual compounds, but primarily for monoterpenoids. Environment (site) also had a significant effect on the accumulation of some compounds, whereas for others, no significant environmental effect occurred. However, for a few compounds significant family x environment interactions were found. These results suggest that P. c. latifolia secondary chemistry is under strong genetic control, but the effects depend on the individual compounds and whether or not they are expressed constitutively or following induction.

  13. Development of SYN-004, an oral beta-lactamase treatment to protect the gut microbiome from antibiotic-mediated damage and prevent Clostridium difficile infection.

    Science.gov (United States)

    Kaleko, Michael; Bristol, J Andrew; Hubert, Steven; Parsley, Todd; Widmer, Giovanni; Tzipori, Saul; Subramanian, Poorani; Hasan, Nur; Koski, Perrti; Kokai-Kun, John; Sliman, Joseph; Jones, Annie; Connelly, Sheila

    2016-10-01

    The gut microbiome, composed of the microflora that inhabit the gastrointestinal tract and their genomes, make up a complex ecosystem that can be disrupted by antibiotic use. The ensuing dysbiosis is conducive to the emergence of opportunistic pathogens such as Clostridium difficile. A novel approach to protect the microbiome from antibiotic-mediated dysbiosis is the use of beta-lactamase enzymes to degrade residual antibiotics in the gastrointestinal tract before the microflora are harmed. Here we present the preclinical development and early clinical studies of the beta-lactamase enzymes, P3A, currently referred to as SYN-004, and its precursor, P1A. Both P1A and SYN-004 were designed as orally-delivered, non-systemically available therapeutics for use with intravenous beta-lactam antibiotics. SYN-004 was engineered from P1A, a beta-lactamase isolated from Bacillus licheniformis, to broaden its antibiotic degradation profile. SYN-004 efficiently hydrolyses penicillins and cephalosporins, the most widely used IV beta-lactam antibiotics. In animal studies, SYN-004 degraded ceftriaxone in the GI tract of dogs and protected the microbiome of pigs from ceftriaxone-induced changes. Phase I clinical studies demonstrated SYN-004 safety and tolerability. Phase 2 studies are in progress to assess the utility of SYN-004 for the prevention of antibiotic-associated diarrhea and Clostridium difficile disease. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

  14. The transporter SynPAM71 is located in the plasma membrane and thylakoids, and mediates manganese tolerance in Synechocystis PCC6803

    DEFF Research Database (Denmark)

    Gandini, Chiara; Schmidt, Sidsel Birkelund; Husted, Søren

    2017-01-01

    symptoms were observed in WT cells exposed to excess Mn. Moreover, CyanoP, which is involved in the early steps of PSII assembly, is massively upregulated in ΔSynPAM71. SynPAM71 was detected in both the plasma membrane and, to a lesser extent, the thylakoid membranes. Our results suggest that SynPAM71......Manganese (Mn) is an essential constituent of photosystem II (PSII) and therefore indispensable for oxygenic photosynthesis. Very little is known about how Mn is transported, delivered and retained in photosynthetic cells. Recently, the thylakoid-localized transporter PAM71 has been linked...... to chloroplast Mn homeostasis in Arabidopsis thaliana. Here, we characterize the function of its homolog in Synechocystis (SynPAM71). We used a loss-of-function line (ΔSynPAM71), wild-type (WT) cells exposed to Mn stress and strains expressing a tagged variant of SynPAM71 to characterize the role of SynPAM71...

  15. Criticality accidents in solution (CRAC and SILENE programmes) and complementary studies of accidents; radiation dosimetry in human organism during the CRAC programme

    International Nuclear Information System (INIS)

    Barbry, M.; Dousset, M.

    C.R.A.C. (CRiticality occurring ACcidentally) programme is intended to study experimentally the development of a criticality accident as it could occur when handling solutions of fissile material as well as the radiological consequences of such an accident. The fissile matter solutions have been chosen (a) for practical considerations of use and (b) because the probability of an accident occurring seems greater with this type of environment, as the known accidents have shown. The programme is twofold: study of accident physics: form of the evolution (peak, plateau, oscillations, boil up of solutions) the most probable maximum power, minimal power, flux and radiation spectra emitted, freed energy, associated effects, radiolysis, constraints, etc., study of radiological consequences: area dosimetry, individual dosimetry, radiobiological studies, etc. Additional criticality Accident experiments have been and continue to be made on the SILENE reactor in the following principal domains: determination of the emission rate of gaseous fission products and aerosols, area dosimetry and health dosimetry in the presence of shields around the core to vary the neutron and gamma components of the radiation field. Improvement in the knowledge of certain particular aspects of the power excursion, radiolysis gas and pressure wave, experiments of the ''boiling'' type [fr

  16. SynFace—Speech-Driven Facial Animation for Virtual Speech-Reading Support

    Directory of Open Access Journals (Sweden)

    Giampiero Salvi

    2009-01-01

    Full Text Available This paper describes SynFace, a supportive technology that aims at enhancing audio-based spoken communication in adverse acoustic conditions by providing the missing visual information in the form of an animated talking head. Firstly, we describe the system architecture, consisting of a 3D animated face model controlled from the speech input by a specifically optimised phonetic recogniser. Secondly, we report on speech intelligibility experiments with focus on multilinguality and robustness to audio quality. The system, already available for Swedish, English, and Flemish, was optimised for German and for Swedish wide-band speech quality available in TV, radio, and Internet communication. Lastly, the paper covers experiments with nonverbal motions driven from the speech signal. It is shown that turn-taking gestures can be used to affect the flow of human-human dialogues. We have focused specifically on two categories of cues that may be extracted from the acoustic signal: prominence/emphasis and interactional cues (turn-taking/back-channelling.

  17. Myceliophthora thermophila syn. Sporotrichum thermophile: a thermophilic mould of biotechnological potential.

    Science.gov (United States)

    Singh, Bijender

    2016-01-01

    Myceliophthora thermophila syn. Sporotrichum thermophile is a ubiquitous thermophilic mould with a strong ability to degrade organic matter during optimal growth at 45 °C. Both genome analysis and experimental data have suggested that the mould is capable of hydrolyzing all major polysaccharides found in biomass. The mould is able to secrete a large number of hydrolytic enzymes (cellulases, laccases, xylanases, pectinases, lipases, phytases and some other miscellaneous enzymes) employed in various biotechnological applications. Characterization of the biomass-hydrolyzing activity of wild and recombinant enzymes suggests that this mould is highly efficient in biomass decomposition at both moderate and high temperatures. The native enzymes produced by the mould are more efficient in activity than their mesophilic counterparts beside their low enzyme titers. The mould is able to synthesize various biomolecules, which are used in multifarious applications. Genome sequence data of M. thermophila also supported the physiological data. This review describes the biotechnological potential of thermophilic mould, M. thermophila supported by genomic and experimental evidences.

  18. Rhodium-catalysed syn-carboamination of alkenes via a transient directing group.

    Science.gov (United States)

    Piou, Tiffany; Rovis, Tomislav

    2015-11-05

    Alkenes are the most ubiquitous prochiral functional groups--those that can be converted from achiral to chiral in a single step--that are accessible to synthetic chemists. For this reason, difunctionalization reactions of alkenes (whereby two functional groups are added to the same double bond) are particularly important, as they can be used to produce highly complex molecular architectures. Stereoselective oxidation reactions, including dihydroxylation, aminohydroxylation and halogenation, are well established methods for functionalizing alkenes. However, the intermolecular incorporation of both carbon- and nitrogen-based functionalities stereoselectively across an alkene has not been reported. Here we describe the rhodium-catalysed carboamination of alkenes at the same (syn) face of a double bond, initiated by a carbon-hydrogen activation event that uses enoxyphthalimides as the source of both the carbon and the nitrogen functionalities. The reaction methodology allows for the intermolecular, stereospecific formation of one carbon-carbon and one carbon-nitrogen bond across an alkene, which is, to our knowledge, unprecedented. The reaction design involves the in situ generation of a bidentate directing group and the use of a new cyclopentadienyl ligand to control the reactivity of rhodium. The results provide a new way of synthesizing functionalized alkenes, and should lead to the convergent and stereoselective assembly of amine-containing acyclic molecules.

  19. Physiological characterization of the SynCardia total artificial heart in a mock circulation system.

    Science.gov (United States)

    Crosby, Jessica R; DeCook, Katrina J; Tran, Phat L; Smith, Richard G; Larson, Douglas F; Khalpey, Zain I; Burkhoff, Daniel; Slepian, Marvin J

    2015-01-01

    The SynCardia total artificial heart (TAH) has emerged as an effective, life-saving biventricular replacement system for a wide variety of patients with end-stage heart failure. Although the clinical performance of the TAH is established, modern physiological characterization, in terms of elastance behavior and pressure-volume (PV) characterization has not been defined. Herein, we examine the TAH in terms of elastance using a nonejecting left ventricle, and then characterize the PV relation of the TAH by varying preload and afterload parameters using a Donovan Mock Circulatory System. We demonstrate that the TAH does not operate with time-varying elastance, differing from the human heart. Furthermore, we show that the TAH has a PV relation behavior that also differs from that of the human heart. The TAH does exhibit Starling-like behavior, with output increasing via preload-dependent mechanisms, without reliance on an alteration of inotropic state within the operating window of the TAH. Within our testing range, the TAH is insensitive to variations in afterload; however, this insensitivity has a limit, the limit being the maximum driving pressure of the pneumatic driver. Understanding the physiology of the TAH affords insight into the functional parameters that govern artificial heart behavior providing perspective on differences compared with the human heart.

  20. A Spore Counting Method and Cell Culture Model for Chlorine Disinfection Studies of Encephalitozoon syn. Septata intestinalis

    OpenAIRE

    Wolk, D. M.; Johnson, C. H.; Rice, E. W.; Marshall, M. M.; Grahn, K. F.; Plummer, C. B.; Sterling, C. R.

    2000-01-01

    The microsporidia have recently been recognized as a group of pathogens that have potential for waterborne transmission; however, little is known about the effects of routine disinfection on microsporidian spore viability. In this study, in vitro growth of Encephalitozoon syn. Septata intestinalis, a microsporidium found in the human gut, was used as a model to assess the effect of chlorine on the infectivity and viability of microsporidian spores. Spore inoculum concentrations were determine...

  1. Geological Mapping and Investigation into a Proposed Syn-rift Alluvial Fan Deposit in the Kerpini Fault Block, Greece.

    OpenAIRE

    Hadland, Sindre

    2016-01-01

    Master's thesis in Petroleum geosciences engineering The Kerpini Fault Block is located in the southern part of the Gulf of Corinth rift system. The rift system consists of several east-west orientated half-grabens with associated syn-rift sediments. Kerpini Fault Block is one of the southernmost half-grabens within the rift systems, and is composed of several different stratigraphic units. The stratigraphic framework consists of a complex interaction of several stratigraphic units. One of...

  2. Implantation technique of the 50-cm3 SynCardia Total Artificial Heart: does size make a difference?

    Science.gov (United States)

    Spiliopoulos, Sotirios; Guersoy, Dilek; Dimitriou, Alexandros Merkourios; Koerfer, Reiner; Tenderich, Gero

    2015-01-01

    Despite downsizing, implantation technique of the 50-cm(3) SynCardia Total Artificial Heart and settings of the Companion driver remain unchanged. Owing to the absence of de-airing nipples, de-airing procedure is even more crucial and has to be performed carefully. © The Author 2015. Published by Oxford University Press on behalf of the European Association for Cardio-Thoracic Surgery. All rights reserved.

  3. Synergistic Exploitation of Hyper- and Multi-Spectral Precursor Sentinel Measurements to Determine Phytoplankton Functional Types (SynSenPFT

    Directory of Open Access Journals (Sweden)

    Svetlana N. Losa

    2017-07-01

    Full Text Available We derive the chlorophyll a concentration (Chla for three main phytoplankton functional types (PFTs – diatoms, coccolithophores and cyanobacteria – by combining satellite multispectral-based information, being of a high spatial and temporal resolution, with retrievals based on high resolution of PFT absorption properties derived from hyperspectral satellite measurements. The multispectral-based PFT Chla retrievals are based on a revised version of the empirical OC-PFT algorithm applied to the Ocean Color Climate Change Initiative (OC-CCI total Chla product. The PhytoDOAS analytical algorithm is used with some modifications to derive PFT Chla from SCIAMACHY hyperspectral measurements. To combine synergistically these two PFT products (OC-PFT and PhytoDOAS, an optimal interpolation is performed for each PFT in every OC-PFT sub-pixel within a PhytoDOAS pixel, given its Chla and its a priori error statistics. The synergistic product (SynSenPFT is presented for the period of August 2002 March 2012 and evaluated against PFT Chla data obtained from in situ marker pigment data and the NASA Ocean Biogeochemical Model simulations and satellite information on phytoplankton size. The most challenging aspects of the SynSenPFT algorithm implementation are discussed. Perspectives on SynSenPFT product improvements and prolongation of the time series over the next decades by adaptation to Sentinel multi- and hyperspectral instruments are highlighted.

  4. Calculations of kinetic isotope effects in the syn-eliminations of (2-phenylethyl)dimethylamine oxides

    International Nuclear Information System (INIS)

    Shafiei-Kermani, H.R.

    1987-01-01

    Transition state theory (TST) calculations of kinetic isotope effects (KIE) for the syn-elimination of (2-phenylethyl)dimethylamine oxides have been carried out for a series of transition state (TS) models encompassing both E1-like and E1cB-like regions of the E2 mechanistic spectrum. A large number of different reaction coordinates were explored for both unsolvated and for coordination of solvent dimethylsulfoxide in the cyclic transition state models. The models of reaction for both solvated and unsolvated models of proton transfer are presented. A simplified method for easier initial screening of reaction coordinate contributions is developed, discussed, and found to produce accurate approximations to the full model KIE values. Both unsolvated and solvated models show E1-like E2 mechanism and the calculated values from both models are in extremely good agreement with experimentally measured KIE. Both models were used to investigate para-substituted derivatives (Z = CL, OCH 3 ) of the parent compound (Z = H). The transition states are related by a shift in structure parallel to the central E2 diagonal of an O'Ferrall-Jencks-Fry reaction diagram, as predicted by Thornton, indicating that in the absence of other factors, the extent to which negative charge is accumulated at C/sub β/ in the transition state is a function primarily of the leaving group. All of the structural parameters such as bond distances and bond angles were related to independent bond orders. Beta-deuterium isotope effects produced by both solvated and nonsolvated models are temperature dependent

  5. Base Pair Opening in a Deoxynucleotide Duplex Containing a cis-syn Thymine Cyclobutane Dimer Lesion

    Science.gov (United States)

    Wenke, Belinda B.; Huiting, Leah N.; Frankel, Elisa B.; Lane, Benjamin F.; Núñez, Megan E.

    2014-01-01

    The cis-syn thymine cyclobutane dimer is a DNA photoproduct implicated in skin cancer. We compared the stability of individual base pairs in thymine dimer-containing duplexes to undamaged parent 10-mer duplexes. UV melting thermodynamic measurements, CD spectroscopy, and 2D NOESY NMR spectroscopy confirm that the thymine dimer lesion is locally and moderately destabilizing within an overall B-form duplex conformation. We measured the rates of exchange of individual imino protons by NMR using magnetization transfer from water and determined the equilibrium constant for the opening of each base pair Kop. In the normal duplex Kop decreases from the frayed ends of the duplex toward the center, such that the central TA pair is the most stable with a Kop of 8×10−7. In contrast, base pair opening at the 5’T of the thymine dimer is facile. The 5’T of the dimer has the largest equilibrium constant (Kop =3×10−4) in its duplex, considerably larger than even the frayed penultimate base pairs. Notably, base pairing by the 3’T of the dimer is much more stable than by the 5’T, indicating that the predominant opening mechanism for the thymine dimer lesion is not likely to be flipping out into solution as a single unit. The dimer asymmetrically affects the stability of the duplex in its vicinity, destabilizing base pairing on its 5’ side more than on the 3’ side. The striking differences in base pair opening between parent and dimer duplexes occur independently of the duplex-single strand melting transitions. PMID:24328089

  6. Experience with the SynCardia total artificial heart in a Canadian centre.

    Science.gov (United States)

    Nguyen, Anthony; Pellerin, Michel; Perrault, Louis P; White, Michel; Ducharme, Anique; Racine, Normand; Carrier, Michel

    2017-12-01

    The SynCardia total artificial heart (TAH) provides complete circulatory support by replacing both native ventricles. Accepted indications include bridge to transplantation and destination therapy. We review our experience with TAH implantation during a period when axial flow pump became available. We retrospectively analyzed the demographics, clinical characteristics and survival of all patients receiving the TAH. From September 2004 to November 2016, 13 patients (12 men, mean age 45 ± 13 yr) received the TAH for refractory cardiogenic shock secondary to idiopathic (56%) or ischemic (17%) cardiomyopathy and to other various causes (33%). Before implantation, mean ejection fraction was 14% ± 4%, 7 (54%) patients had previous cardiac surgery, 4 (31%) were on mechanical ventilation, and 3 (23%) patients were on dialysis. The mean duration of TAH support was 46 ± 40 days. Three (23%) patients died while on support after a mean of 15 days. Actuarial survival on support was 77% ± 12% at 30 days after implantation. Complications on support included stroke ( n = 1, 8%), acute respiratory distress syndrome requiring prolonged intubation ( n = 5, 38%) and acute renal failure requiring temporary dialysis ( n = 5, 38%). Ten (77%) patients survived to be transplanted after a mean of 52 ± 42 days of support. Actuarial survival rates after transplant were 67% ± 16% at 1 month and 56% ± 17% at 1 year after transplantation. The TAH provides an alternative with low incidence of neurologic events in extremely fragile and complex patients waiting for heart transplantation. Complex and unusual anatomic conditions explained the current use of TAH.

  7. SYN-RIFT SANDSTONЕS: THE FEATURES OF BULK CHEMICAL COMPOSITIONS, AND POSITIONS ON PALEOGEODYNAMIC DISCRIMINANT DIAGRAMS

    Directory of Open Access Journals (Sweden)

    A. V. Maslov

    2018-01-01

    Full Text Available From the early 1980s, the data on the bulk chemical composition of sandstones and mudstones are actively involved for interpretation of the paleogeodynamic settings for sedimentary sequences. Discriminant diagrams such as K2O/Na2O–SiO2/Al2O3 [Maynard et al., 1982], (Fe2O3*+MgO–K2O/Na2O and others [Bhatia, 1983], SiO2–K2O/Na2O [Roser, Korsch, 1986], (K2O+Na2O–SiO2/20–(TiO2+Fe2O3+MgO [Kroonenberg, 1994] etc., are now widely used in regional investigations to classify terrigenous rocks from several paleogeodynamic settings (passive and active continental margins, oceanic and continental volcanic arcs etc. with a certain ‘percentage of consistency’. The first diagrams DF1–DF2 for syn-rift compositions were published in the early 2010s [Verma, Armstrong-Altrin, 2013]. This article analyzes the bulk chemical compositions of syn-rift sandstones from intracratonic rifts and rifts formed during the break-up of the Columbia and Gondwana supercontinents, rifts within volcanic arcs and related to the collapse of collision orogens (for example, Permian sandstones of the Malužiná formation, Western Carpathians, Slovakia. Our database includes the Neoproterozoic Uinta Mountain Group (USA, the Cretaceous Omdurman formation of the Khartoum Basin (Sudan, the siliciclastic deposits of the Kalahari Basin (East African rift zone, the sandstones of the Vindhyan Supergroup (India, the Neoproterozoic Ui Group of the Uchur-Maya region (Southeast Siberia, the Meso-Neoproterozoic Banxi Group (Southern China, the Mesoproterozoic Belt-Purcell Supergroup (USA, the Oronto and Bayfield Groups of the Midcontinent (USA, as well as the sandstones of the Upper Precambrian Ai and Mashak formations, and the metasedimentary rocks of the Arsha Group (Southern Urals. The article examines: (1 the position of the syn-rift sandstone compositions (fields on the log(SiO2/Al2O3–log(Na2O/K2O classification diagram and the F1–F2 diagram, which gives the possible

  8. Lodgepole Pine Cambium (Pinus contorta Dougl. ex Loud. var. latifolia Engelm. ex S. Wats.): a springtime first peoples' food in British Columbia.

    Science.gov (United States)

    Dilbone, Megan; Turner, Nancy J; von Aderkas, Patrick

    2013-01-01

    Lodgepole pine (Pinus contorta var. latifolia) is a tree species utilized for succulent edible cambium and secondary phloem in the spring by Interior First Peoples of the Pacific Northwest. In this article we present a nutritional analysis of this food based on a pooled sample of 17 trees harvested in the Chilcotin region of British Columbia. We also present enzymatic sugar analysis of raw, dried, and cooked lodgepole pine cambium harvested from the Chilcotin and Okanagan regions in British Columbia. In the discussion we interpret the nutrient values of raw lodgepole pine cambium in comparison to dried and cooked cambium, results from other nutritional studies of pine cambium, and nutrients in some other traditional and nontraditional foods.

  9. Syn-collisional felsic magmatism and continental crust growth: A case study from the North Qilian Orogenic Belt at the northern margin of the Tibetan Plateau

    Science.gov (United States)

    Chen, Shuo; Niu, Yaoling; Xue, Qiqi

    2018-05-01

    The abundant syn-collisional granitoids produced and preserved at the northern Tibetan Plateau margin provide a prime case for studying the felsic magmatism as well as continental crust growth in response to continental collision. Here we present the results from a systematic study of the syn-collisional granitoids and their mafic magmatic enclaves (MMEs) in the Laohushan (LHS) and Machangshan (MCS) plutons from the North Qilian Orogenic Belt (NQOB). Two types of MMEs from the LHS pluton exhibit identical crystallization age ( 430 Ma) and bulk-rock isotopic compositions to their host granitoids, indicating their genetic link. The phase equilibrium constraints and pressure estimates for amphiboles from the LHS pluton together with the whole rock data suggest that the two types of MMEs represent two evolution products of the same hydrous andesitic magmas. In combination with the data on NQOB syn-collisional granitoids elsewhere, we suggest that the syn-collisional granitoids in the NQOB are material evidence of melting of ocean crust and sediment. The remarkable compositional similarity between the LHS granitoids and the model bulk continental crust in terms of major elements, trace elements, and some key element ratios indicates that the syn-collisional magmatism in the NQOB contributes to net continental crust growth, and that the way of continental crust growth in the Phanerozoic through syn-collisional felsic magmatism (production and preservation) is a straightforward process without the need of petrologically and physically complex processes.

  10. 3D imaging of vesicles in hyaloclastic fragments - clues to syn-eruptive shear conditions

    Science.gov (United States)

    Helo, C.; Flaws, A.; Hess, K.; Franz, A.; Clague, D. A.; Dingwell, D. B.

    2011-12-01

    3D imaging of stretched vesicles in hyaloclastic fragments has been used to investigate the shear environment of mild pyroclastic eruptions at mid-ocean ridges. X-ray computed tomography offers an attractive non-invasive method to investigate geomaterials at a high resolution for the geometry of the different phases. In this study, we have imaged vesicles within two types of basaltic glass fragments. Stretched, ellipsoid-shaped vesicles in thin limu o Pele and tubular vesicles in a pumiceous fragment. Both types originate from pyroclastic activity on Axial Seamount, Juan de Fuca ridge. Rapid quenching of the glass has prevented extensive bubble relaxation and information about syn-eruptive shear and differential stress conditions is stored, as the dimensions of a stretched bubble directly relates to the extent and mode of shearing. The X-ray tomography data was processed using a set of codes based on edge detection and ellipsoid fitting to acquire quantitative information on the shape of the stretched vesicles. Preliminary results demonstrate, that the geometry of the stretched vesicles, e.g., the elongation of the vesicle with respect to the calculated undeformed radius, is in accordance with simple shear scenarios. Stored differential stress ranges from 5 kPa to 90 kPa with shear rates between 3.2x102 s-1 and 5.7x3 s-1 within a single limu o Pele fragment. This range may be explained by either variable time available for relaxation as the cooling front proceeds through the fragment, complex interplay in space and time between fragmentation and quenching, bubble clusters mutually inhibiting each others extend of deformation, or any combination of these. Bubble relaxation time scales are less then 0.005 s providing constraints on the timeframe for cooling to the glass transition. Qualitative analyses of the tube pumice indicates that the tubular structures grow in length by coalescence of vertically aligned ellipsoid-shaped vesicles, and in width by coalescence of

  11. Syn-sedimentary tectonics and facies analysis in a rift setting: Cretaceous Dalmiapuram Formation, Cauvery Basin, SE India

    Directory of Open Access Journals (Sweden)

    Nivedita Chakraborty

    2018-04-01

    Full Text Available The Cretaceous (Albian–Cenomanian Dalmiapuram Formation is one of the economically significant constituents in the hydrocarbon-producing Cauvery rift basin, SE India that opened up during the Late Jurassic–Early Cretaceous Gondwanaland fragmentation. The fossil-rich Dalmiapuram Formation, exposed at Ariyalur within the Pondicherry sub-basin of Cauvery Basin, rests in most places directly on the Archean basement and locally on the Lower Cretaceous (Barremian–Aptian Basal Siliciclastic Formation. In the Dalmiapuram Formation, a facies association of tectonically-disturbed phase is sandwiched between two drastically quieter phases. The early syn-rift facies association (FA 1, records the first carbonate marine transgression within the basin, comprising a bar–lagoon system with occasionally storms affecting along the shore and a sheet-like non-recurrent biomicritic limestone bed on the shallow shelf that laterally grades into pyrite–glauconite-bearing dark-colored shale in the deeper shelf. Spectacular breccias together with varied kinds of mass-flow products comprise the syn-rift facies association (FA 2. While the breccias occur at the basin margin area, the latter extend in the deeper inland sea. Clast composition of the coarse clastics includes large, even block-sized limestone fragments and small fragments of granite and sandstone from the basement. Marl beds of quieter intervals between tectonic pulses occur in alternation with them. Faulted basal contact of the formation, and small grabens filled by multiple mass-flow packages bear the clear signature of the syntectonic activity localized contortions, slump folds, and pillow beds associated with mega slump/slide planes and joints, which corroborates this contention further. This phase of tectonic intervention is followed by another relatively quieter phase and accommodates the late syn-rift facies association (FA 3. A tidal bar–interbar shelf depositional system allowed a

  12. JOINTS AND SYN-SEDIMENTARY FAULTS NETWORKS IN MARINE CLAYS AND MUDSTONES. Importance for Radwaste storage

    Science.gov (United States)

    Arnould, M.

    2009-12-01

    There is a number of marine clays, mudstones, marls, 100 to 200 m thick, showing smectites, mixed layers illite/smectite, with a small percentage of organic matter and sulphides with a variable clay, silt, and carbonate content. I published (Arnould , 2006) examples from Lower Cambrian to Miocene in age and from the Baltic shore to Spain in Europe. Observations were made mostly in quarries and pits down to more than 40 m and in underground research laboratories (URL). Only visible on fresh cuts amongst a variety of fissures there is always a network of joints. Schematically one family is the bedding (horizontal) the two others are normal to the bedding and orthogonal between them. The orientations of vertical joints are different from the orientations of pits and quarries’s walls. The networks are intrinsic. It was first well described by Skempton & al (1969) in Eocene London Clay. Joints are matt in texture, clean, without filling or cement. The order of magnitude of their linear dimensions is decimeter to meter. It is necessary to start from the original sediment: mud. Deposited in flakes mud has a bee’s nest microscopic structure. Each nest is full of water. Hence mud may have a water content up to 300%, reported to its dry weight. Paradoxically mud is impervious. As proposed by Cosgrove (2001) progressive but discontinuous hydraulic fracturing could be the origin of vertical joints, with drainage upwards and compaction of the sediment. Geological observations show that ioints are formed during the sedimentation process. There is also a world literature concluding at the necessary early fracturing of mudstones and marls hosts of sand dykes. Very few faults are identified in field observations and on exploration logs. But it is obvious that drainage and compaction of mud over thousands square kilometers induced differential settlements with many syn-sedimentary non tectonic faults constituting another discontinuity network. These faults inside the same

  13. The composition and depth of green roof substrates affect the growth of Silene vulgaris and Lagurus ovatus species and the C and N sequestration under two irrigation conditions.

    Science.gov (United States)

    Ondoño, S; Martínez-Sánchez, J J; Moreno, J L

    2016-01-15

    Extensive green roofs are used to increase the surface area covered by vegetation in big cities, thereby reducing the urban heat-island effect, promoting CO2 sequestration, and increasing biodiversity and urban-wildlife habitats. In Mediterranean semi-arid regions, the deficiency of water necessitates the use in these roofs of overall native plants which are more adapted to drought than other species. However, such endemic plants have been used scarcely in green roofs. For this purpose, we tested two different substrates with two depths (5 and 10 cm), in order to study their suitability with regard to adequate plant development under Mediterranean conditions. A compost-soil-bricks (CSB) (1:1:3; v:v:v) mixture and another made up of compost and bricks (CB) (1:4; v:v) were arranged in two depths (5 and 10 cm), in cultivation tables. Silene vulgaris (Moench) Garcke and Lagurus ovatus L. seeds were sown in each substrate. These experimental units were subjected, on the one hand, to irrigation at 40% of the registered evapotranspiration values (ET0) and, on the other, to drought conditions, during a nine-month trial. Physichochemical and microbiological substrate characteristics were studied, along with the physiological and nutritional status of the plants. We obtained significantly greater plant coverage in CSB at 10 cm, especially for L. ovatus (80-90%), as well as a better physiological status, especially in S. vulgaris (SPAD values of 50-60), under irrigation, whereas neither species could grow in the absence of water. The carbon and nitrogen fixation by the substrate and the aboveground biomass were also higher in CSB at 10 cm, especially under L. ovatus - in which 1.32 kg C m(-2) and 209 g N m(-2) were fixed throughout the experiment. Besides, the enzymatic and biochemical parameters assayed showed that microbial activity and nutrient cycling, which fulfill a key role for plant development, were higher in CSB. Therefore, irrigation of 40% can

  14. Origin of C. latifolia and C. aurantiifolia triploid limes: the preferential disomic inheritance of doubled-diploid 'Mexican' lime is consistent with an interploid hybridization hypothesis.

    Science.gov (United States)

    Rouiss, H; Bakry, F; Froelicher, Y; Navarro, L; Aleza, P; Ollitrault, P

    2018-03-05

    Two main types of triploid limes are produced worldwide. The 'Tahiti' lime type (Citrus latifolia) is predominant, while the 'Tanepao' type (C. aurantiifolia) is produced to a lesser extent. Both types result from natural interspecific hybridization involving a diploid gamete of C. aurantiifolia 'Mexican' lime type (itself a direct interspecific C. micrantha × C. medica hybrid). The meiotic behaviour of a doubled-diploid 'Mexican' lime, the interspecific micrantha/medica recombination and the resulting diploid gamete structures were analysed to investigate the possibility that 'Tahiti' and 'Tanepao' varieties are derived from natural interploid hybridization. A population of 85 tetraploid hybrids was established between a doubled-diploid clementine and a doubled-diploid 'Mexican' lime and used to infer the genotypes of 'Mexican' lime diploid gametes. Meiotic behaviour was studied through combined segregation analysis of 35 simple sequenbce repeat (SSR) and single nucleotide polymorphismn (SNP) markers covering the nine citrus chromosomes and cytogenetic studies. It was supplemented by pollen viability assessment. Pollen viability of the doubled-diploid Mexican lime (64 %) was much higher than that of the diploid. On average, 65 % of the chromosomes paired as bivalents and 31.4 % as tetravalents. Parental heterozygosity restitution ranged from 83 to 99 %. Disomic inheritance with high preferential pairing values was deduced for three chromosomes. Intermediate inheritances, with disomic trend, were found for five chromosomes, and an intermediate inheritance was observed for one chromosome. The average effective interspecific recombination rate was low (1.2 cM Mb-1). The doubled-diploid 'Mexican' lime had predominantly disomic segregation, producing interspecific diploid gamete structures with high C. medica/C. micrantha heterozygosity, compatible with the phylogenomic structures of triploid C. latifolia and C. aurantiifolia varieties. This disomic trend limits

  15. Salt flow direction and velocity during subsalt normal faulting and syn-kinematic sedimentation—implications from analytical calculations

    Science.gov (United States)

    Warsitzka, M.; Kukowski, N.; Kley, J.

    2018-04-01

    Salt flow induced by subsalt normal faulting is mainly controlled by tilting of the salt layer, the amount of differential loading due to syn-kinematic deposition, and tectonic shearing at the top or the base of the salt layer. Our study addresses the first two mechanisms and aims to examine salt flow patterns above a continuously moving subsalt normal fault and beneath a syn-kinematic minibasin. In such a setting, salt either tends to flow down towards the basin centre driven by its own weight or is squeezed up towards the footwall side owing to loading differences between the minibasin and the region above the footwall block. Applying isostatic balancing in analytical models, we calculated the steady-state flow velocity in a salt layer. This procedure gives insights into (1) the minimum vertical offset required for upward flow to occur, (2) the magnitude of the flow velocity, and (3) the average density of the supra-salt cover layer at the point at which upward flow starts. In a sensitivity study, we examined how the point of flow reversal and the velocity patterns are influenced by changes of the salt and cover layer thickness, the geometry of the cover flexure, the dip of the subsalt fault, compaction parameters of the supra-salt cover, the salt viscosity and the salt density. Our model results reveal that in most geological scenarios, salt flow above a continuously displacing subsalt normal fault goes through an early phase of downward flow. At sufficiently high fault offset in the range of 700-2600 m, salt is later squeezed upward towards the footwall side. This flow reversal occurs at smaller vertical fault displacement, if the thickness of the pre-kinematic layer is larger, the sedimentation rate of the syn-kinematic cover is higher, the compaction coefficient of cover sediments (i.e. the density increase with depth) is larger or the average density of the salt is lower. Other geometrical parameters such as the width of the cover monocline, the dip of the

  16. The Uses of Copper and Zinc Aluminates to Capture and Convert Carbon dioxide to Syn-gas at Higher Temperature

    Directory of Open Access Journals (Sweden)

    R.Y. Raskar

    2014-03-01

    Full Text Available The uses of copper and zinc aluminates to capture and convert the CO2 to syn-gas were studied at higher temperatures. The samples of copper and zinc aluminates were prepared by solid-solid fusion method by calcining in air at 900 oC for 3 h. Those samples were characterized by acidity/alkalinity, surface area, XRD pattern, IR, SEM images and screening to capture CO2 at the different temperatures. The phases Cu2O, CuO, ZnO, CuAl2O4 and ZnAl2O4 were found to be in the samples of zinc and copper aluminates. Acidity and surface area of the samples of copper and zinc aluminates were found to be in the ranges from 0.063 to 9.37 mmol g-1 and 3.04 to 11.8 m2 g-1, respectively. The captured CO2 by the samples of copper and zinc aluminates was found to be 19.92 to 31.52 wt% for the temperature range 40 to 850 oC. The captured CO2 at 550 oC by variable Zn/Al and Cu/Al mol ratio from 0.5 to 6 of the samples of copper and zinc aluminates was found to be 12.81 to 18.04 wt%. The reduction of carbon dioxide by zinc and copper aluminates was observed. The conversion of CO2 by methane over variable mol ratio of Cu/Al and Zn/Al in copper and zinc aluminates, respectively, at 500 oC showed the production of syn-gas by using the gas hourly space velocities (GHSV 12000, 12000 and 6000 ml. h-1. g-1 of helium, CO2 and methane. The conversions of CO2 by methane over the samples of zinc and copper aluminates were studied at different mol ratios of CO2 to methane.  © 2014 BCREC UNDIP. All rights reservedReceived: 13rd May 2013; Revised: 8th November 2013; Accepted: 8th November 2013[How to Cite: Raskar, R.Y., Gaikwad, A.G. (2014. The Uses of Copper and Zinc Aluminates to Cap-ture and Convert Carbon Dioxide to Syn-gas at Higher Temperature. Bulletin of Chemical Reaction Engineering & Catalysis, 9 (1: 1-15. (doi:10.9767/bcrec.9.1.4899.1-15[Permalink/DOI: http://dx.doi.org/10.9767/bcrec.9.1.4899.1-15

  17. Leaves and roots of Typha latifolia L. and Iris pseudacorus L. as bioindicators of contamination of bottom sediments by heavy metals

    Directory of Open Access Journals (Sweden)

    Parzych Agnieszka

    2016-12-01

    Full Text Available The paper concerns the bioaccumulation of zinc, nickel, iron and manganese in leaves and roots of selected macrophytes from the Krzynia Reservoir (northern Poland. The research was conducted within the area of 10 stations situated in the littoral zone of the reservoir. Samples of surface waters, bottom sediments and plants were taken in summer. Heavy metal content was determined by the atomic absorption spectrometry method (ASA. The concentration of heavy metals in the waters of Krzynia Reservoir was low and noinfluence of anthropogenic factors was found. Concentration of heavy metals in the examined bottom sediments was low and remained within the limits of the geochemical background for Zn and Fe. In the case of Ni and Mn it sporadically exceeded the level of the geochemical background. The tested plants mainly accumulated heavy metals in roots, with the exception of nickel which appeared in larger quantities in leaves. The relationships among the content of the determined elements in the organs of macrophytes was identical for the tested species and could be arranged into the following sequences: Mn>Fe>Ni>Zn in leaves and Fe>Mn>Zn>Ni in roots. Statistically significant differences were found in the content of Mn in leaves and Zn and Fe in the roots of Typha latifolia L. and Iris pseudacorus L. By accumulating substantial quantities of heavy metals in their organs, macrophytes constitute an effective protective barrier for the waters and bottom sediments.

  18. Up-regulation of an N-terminal truncated 3-hydroxy-3-methylglutaryl CoA reductase enhances production of essential oils and sterols in transgenic Lavandula latifolia.

    Science.gov (United States)

    Muñoz-Bertomeu, Jesús; Sales, Ester; Ros, Roc; Arrillaga, Isabel; Segura, Juan

    2007-11-01

    Spike lavender (Lavandula latifolia) essential oil is widely used in the perfume, cosmetic, flavouring and pharmaceutical industries. Thus, modifications of yield and composition of this essential oil by genetic engineering should have important scientific and commercial applications. We generated transgenic spike lavender plants expressing the Arabidopsis thaliana HMG1 cDNA, encoding the catalytic domain of 3-hydroxy-3-methylglutaryl CoA reductase (HMGR1S), a key enzyme of the mevalonic acid (MVA) pathway. Transgenic T0 plants accumulated significantly more essential oil constituents as compared to controls (up to 2.1- and 1.8-fold in leaves and flowers, respectively). Enhanced expression of HMGR1S also increased the amount of the end-product sterols, beta-sitosterol and stigmasterol (average differences of 1.8- and 1.9-fold, respectively), but did not affect the accumulation of carotenoids or chlorophylls. We also analysed T1 plants derived from self-pollinated seeds of T0 lines that flowered after growing for 2 years in the greenhouse. The increased levels of essential oil and sterols observed in the transgenic T0 plants were maintained in the progeny that inherited the HMG1 transgene. Our results demonstrate that genetic manipulation of the MVA pathway increases essential oil yield in spike lavender, suggesting a contribution for this cytosolic pathway to monoterpene and sesquiterpene biosynthesis in leaves and flowers of the species.

  19. Influence of spike lavender (Lavandula latifolia Med.) essential oil in the quality, stability and composition of soybean oil during microwave heating.

    Science.gov (United States)

    Rodrigues, Nuno; Malheiro, Ricardo; Casal, Susana; Asensio-S-Manzanera, M Carmen; Bento, Albino; Pereira, José Alberto

    2012-08-01

    Lipids oxidation is one of the main factors leading to quality losses in foods. Its prevention or delay could be obtained by the addition of antioxidants. In this sense the present work intend to monitor the protective effects of Lavandula latifolia essential oil during soybean oil microwave heating. To achieve the proposed goal quality parameters (free acidity, peroxide value, specific coefficients of extinction and ΔK), fatty acids profile, tocopherols and tocotrienols composition, antioxidant activity and oxidative stability were evaluated in soybean oil with and without spike lavender essential oils (EO) submitted to different microwave heating exposure times (1, 3, 5, 10 and 15 min; 1000 Watt) with a standard domestic microwave equipment. Microwave heating induced severe quality and composition losses, mainly above 3 min of microwave heating, regardless the sample tested. However, spike lavender EO addition counteracts the oxidation comparatively to control oils, by presenting enhanced values in quality parameters. A higher protection in unsaturated fatty acids loss was also observed as well as a higher antioxidant activity and oxidative stability. The microwave heating effects were clearly different in the samples with essential oils addition, allowing discrimination from plain soybean oils by a principal component analysis, being also capable to discriminate the different heating times tested within each sample. Copyright © 2012 Elsevier Ltd. All rights reserved.

  20. Comparative study of bio-ethanol production from mahula (Madhuca latifolia L.) flowers by Saccharomyces cerevisiae cells immobilized in agar agar and Ca-alginate matrices

    Energy Technology Data Exchange (ETDEWEB)

    Behera, Shuvashish; Mohanty, Rama Chandra [Department of Botany, Utkal University, Vani Vihar, Bhubaneswar 751004, Orissa (India); Kar, Shaktimay; Ray, Ramesh Chandra [Microbiology Laboratory, Central Tuber Crops Research Institute (Regional Centre), Bhubaneswar 751019, Orissa (India)

    2010-01-15

    Batch fermentation of mahula (Madhuca latifolia L., a tree commonly found in tropical rain forest) flowers was carried out using immobilized cells (in agar agar and calcium alginate) and free cells of Saccharomyces cerevisiae. The ethanol yields were 151.2, 154.5 and 149.1 g kg{sup -1} flowers using immobilized (in agar agar and calcium alginate) and free cells, respectively. Cell entrapment in calcium alginate was found to be marginally superior to those in agar agar (2.2% more) as well as over free cell (3.5% more) as regard to ethanol yield from mahula flowers is concerned. Further, the immobilized cells were physiologically active at least for three cycles [150.6, 148.5 and 146.5 g kg{sup -1} (agar agar) and 152.8, 151.5 and 149.5 g kg{sup -1} flowers (calcium alginate) for first, second and third cycle, respectively] of ethanol fermentation without apparently lowering the productivity. Mahula flowers, a renewable, non-food-grade cheap carbohydrate substrate from non-agricultural environment such as forest can serve as an alternative to food grade sugar/starchy crops such as maize, sugarcane for bio-ethanol production. (author)

  1. Phytoremediation of biosolids from an end-of-life municipal lagoon using cattail (Typha latifolia L.) and switchgrass (Panicum virgatum L.).

    Science.gov (United States)

    Jeke, Nicholson N; Hassan, Adenike O; Zvomuya, Francis

    2017-03-04

    Land spreading of biosolids as a disposal option is expensive and can disperse pathogens and contaminants in the environment. This growth room study examined phytoremediation using switchgrass (Panicum virgatum L.) and cattail (Typha latifolia L.) as an alternative to land spreading of biosolids. Seedlings were transplanted into pots containing 3.9 kg of biosolids (dry wt.). Aboveground biomass (AGB) was harvested either once or twice during each 90-day growth period. Switchgrass AGB yield was greater with two harvests than with one harvest during the first 90-day growth period, whereas cattail yield was not affected by harvest frequency. In the second growth period, harvesting frequency did not affect the yield of either plant species. However, repeated harvesting significantly improved nitrogen (N) and phosphorus (P) uptake by both plants in the first period. Phytoextraction of P was significantly greater for switchgrass (3.9% of initial biosolids P content) than for cattail (2.8%), while plant species did not have a significant effect on N phytoextraction. The trace element accumulation in the AGB of both plant species was negligible. Phytoextraction rates attained in this study suggest that phytoremediation can effectively remove P from biosolids and offers a potentially viable alternative to the disposal of biosolids on agricultural land.

  2. Citrus tristeza virus (CTV influence on the behavior of Tahiti lime (Citrus latifoliaTanaka grafted on six rootstocks in the plain piedmont of Colombia (1997-2008

    Directory of Open Access Journals (Sweden)

    Hans Nicolás Chaparro Zambrano

    2013-01-01

    Full Text Available Tahiti lime, Citrus latifolia Tanaka (Rutaceae, is susceptible to Citrus Tristeza Virus (CTV, and if affected, decreases the profitability of the crop. In the well-drained high terrace of the Meta piedmont, the influence of the virus attack was evaluated on the performance of Tahiti lime grafted on six rootstocks (Carrizo; Sunki × English; Sunki × Jacobson; Pomeroy; Rubidoux, y Kryder 15-3 on a completely randomized experiment design taking each tree as an experimental unit. A comparison of means and inferential statistic were used for: plant height, height and canopy diameter; canopy volume, yield and severity of CTV. All rootstocks showed homogenous height. Carrizo was the exception with less size and canopy volume. The highest accumulated fruit yield (Kg/tree wasobtained by Sunki x English, followed by Rubidoux and the lowest yield was obtained by Carrizo. The highest yield efficiency of average canopy volume was obtained with Sunki x Jacobson. The Tahiti lime yield and morphological development fell in the seventh year (2007 in all rootstocks, due to an infection caused by a mix of isolates of CTV type Madeira and type B128, isolates which cause stem channeling : type B31 which causes moderate stem channeling and B7 and VT isolate,

  3. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    Science.gov (United States)

    Pavlis, T. L.; Miller, M.; Serpa, L.

    2008-07-01

    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  4. Geological Study of Active Cold Seeps in the Syn-collision Accretionary Prism Kaoping Slope off SW Taiwan

    Directory of Open Access Journals (Sweden)

    Chi-Yue Huang

    2006-01-01

    Full Text Available Pogonophoran tube worms, elongated pyrite tubes and authigenic carbonate nodules are used to evaluate the occurrence of potential cold seeps in the syn-collision accretionary prism Kaoping Slope off SW Taiwan. At least two species of pogonophoran tubeworms were found in surface and core sediments. Pyrites occur in three different forms: fillings inside foraminiferal chambers, cements between calcareous microfossils, and elongated tubes. The bottom water off SW Taiwan is aerobic, but authigenic pyrites are found in the surface sediments at several sites, suggesting the existence of local reducing environments enabling the formation of pyrites. These environments are most likely caused by the occurrence of active cold seeps where methane expulses. Authigenic carbonates with highly depleted carbon isotope values (-54 to -43‰ were found at more than 5 locations, in agreement with a methane-derived source for the carbon.

  5. Motivation : En studie om lärares och elevers syn på motivation i skolan

    OpenAIRE

    Sundström, Jenny; Wiman, Malin

    2009-01-01

    I vårt examensarbete undersöker vi olika typer av motivation. Vårt syfte med arbetet var att undersöka lärares syn motivation samt elevers egen motivation i skolan. De frågeställningar vi utgick från var: 1. Vilken typ av motivation har elever i år 4 och år 5? 2. Finns det någon skillnad mellan pojkars och flickors motivation? 3. Vilken typ av motivation strävar lärare efter att elever ska erhålla och använda sig av? 4. Hur ser lärare på intrinsic (inre) motivation, extrinsic (yttre) motivati...

  6. The effect of tectonic evolution on lacustrine syn-rift sediment patters in Qikou Sag, Bohaiwan Basin, eastern China

    Science.gov (United States)

    Liao, Y.; Wang, H.; Xu, W.

    2013-12-01

    Normal fault arrays and associated relay ramps between two overlapping en-echelon normal faults are well known to control the deposition and distribution of sediments in alluvial, fluvial and deltaic systems in rift settings. The influence of transfer zones or relay ramps on sediment routes and dispersal patterns in subaqueous (deeper marine/lacustrine), however, is barely studied and hence less clear. Previous experimental studies indicate that subaqueous relay ramps may act as sediment transportation pathways if certain conditions are available. In this study, we integrate detailed structural and stratigraphic analysis with three-dimensional seismic data and limited well log data from the Qikou Sag to examine the tectonic evolution and the syn-rift sediment patterns response to fault growth and linkage in an active rift setting. Qikou Sag is located at the center of Huanghua Depression, Bohaiwan Basin of eastern China. Structurally, it is a typical continental rift basin characterized by a linked system of two NEE-SWW-striking half-grabens and one E-W-striking graben. Qikou sag is filled with Eocene-Oligocene syn-rift sediments and Miocene to Quaternary post-rift sediments. The Eocene-Oligocene rifting stage can be divided into early rifting period (43-36.5 Ma, the third member and second member of Shahejie Formation, Es3 and Es2), stable rifting period (36.5-29Ma, the first member of Shaehejie Formation, Es1) and fault-depressed diversionary period (29-24.6Ma, the Dongying Formation, Ed). This study focus on the early syn-rift, the third and second member of Shehejie Formation, which is mostly dark-grey mudstone interbedded with fine to coarse-grained sandstone deposited by large-scale turbidity currents in deep-lake. In particular, we use a combination of thickness variability and facies distributions, onlap patterns within a high-resolution sequence stratigraphic framework, integrated with structural geometry, fault activity and subsidence history analysis to

  7. High occurrence of Calodium hepaticum (syn. Capillaria hepatica spurious infection in a village in the Atlantic Forest of southern Brazil

    Directory of Open Access Journals (Sweden)

    Débora do Rocio Klisiowicz

    2014-06-01

    Full Text Available Calodium hepaticum (syn. Capillaria hepatica is a nematode of the Capillariidae family that infects rodents and other mammals. In Brazil, human spurious infections of C. hepaticum have been detected in indigenous or rural communities from the Amazon Basin, but not in the southern states of the country. Here, we report the highest occurrence (13.5% of 37 residents of C. hepaticum human spurious infection detected in Brazil and the first record in a southern region, Guaraqueçaba. The finding is explained by the area being located in the Atlantic Forest of the state of Paraná, surrounded by preserved forests and because the inhabitants consume the meat of wild mammals.

  8. Ductile extension of syn-magmatic lower crusts, with application to volcanic passive margins: the Ivrea Zone (Southern Alps, Italy)

    Science.gov (United States)

    Bidault, Marie; Geoffroy, Laurent; Arbaret, Laurent; Aubourg, Charles

    2017-04-01

    Deep seismic reflection profiles of present-day volcanic passive margins often show a 2-layered lower crust, from top to bottom: an apparently ductile 12 km-thick middle-lower layer (LC1) of strong folded reflectors and a 4 km-thick supra-Moho layer (LC2) of horizontal and parallel reflectors. Those layers appear to be structurally disconnected and to develop at the early stages of margins evolution. A magmatic origin has been suggested by several studies to explain those strong reflectors, favoring mafic sills intrusion hypothesis. Overlying mafic and acidic extrusives (Seaward Dipping Reflectors sequences) are bounded by continentward-dipping detachment faults rooting in, and co-structurated with, the ductile part of the lower crust (LC1). Consequently the syn-rift to post-rift evolution of volcanic passive margins (and passive margins in general) largely depends on the nature and the properties of the lower crust, yet poorly understood. We propose to investigate the properties and rheology of a magma-injected extensional lower crust with a field analogue, the Ivrea Zone (Southern Alps, Italy). The Ivrea Zone displays a complete back-thrusted section of a Variscan continental lower crust that first underwent gravitational collapse, and then lithospheric extension. This Late Paleozoic extension was apparently associated with the continuous intrusion of a large volume of mafic to acid magma. Both the magma timing and volume, and the structure of the Ivrea lower crust suggest that this section represents an adequate analogue of a syn-magmatic in-extension mafic rift zone which aborted at the end of the Permian. Notably, we may recognize the 2 layers LC1 and LC2. From a number of tectonic observations, we reconstitute the whole tectonic history of the area, focusing on the strain field evolution with time, in connection with mafic magma injection. We compare those results with available data from extensional mafic lower crusts at rifts and margins.

  9. Polysialic acid modification of the synaptic cell adhesion molecule SynCAM 1 in human embryonic stem cell-derived oligodendrocyte precursor cells

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    Sebastian Werneburg

    2015-05-01

    Full Text Available Oligodendrocyte precursor cells (OPCs are the progenitors of myelinating oligodendrocytes in brain development and repair. Successful myelination depends on the control of adhesiveness during OPC migration and axon contact formation. The decoration of cell surface proteins with the glycan polysialic acid (polySia is a key regulatory element of OPC interactions during development and under pathological conditions. By far the major protein carrier of polySia is the neural cell adhesion molecule NCAM, but recently, polysialylation of the synaptic cell adhesion molecule SynCAM 1 has been detected in the developing mouse brain. In mice, polySia-SynCAM 1 is associated with cells expressing NG2, a marker of a heterogeneous precursor cell population, which is the primary source for oligodendrocytes in development and myelin repair but can also give rise to astrocytes and possibly neurons. It is not yet clear if polySia-SynCAM 1 is expressed by OPCs and its occurrence in humans is elusive. By generating uniform human embryonic stem cell-derived OPC cultures, we demonstrate that polySia is present on human OPCs but down-regulated during differentiation into myelin basic protein-positive oligodendrocytes. PolySia on NCAM resides on the isoforms NCAM-180 and NCAM-140, and SynCAM 1 is identified as a novel polySia acceptor in human OPCs.

  10. Syn-tectonic emplacement of deep-marine reservoir sands at rifting margins : Including a case study from the Vøring Basin

    NARCIS (Netherlands)

    Athmer, W.

    2010-01-01

    This study focuses on the interplay between large-scale relay ramps and sedimentladen flows, specifically low-density turbidity currents that form one end-member of subaqueous sediment gravity flows. The main objective is to better understand the impact of syn-rift faulting on subaqueous sediment

  11. Modeling the Syn-Disposition of Nitrogen Donors in Non-Heme Diiron Enzymes. Synthesis, Characterization, and Hydrogen Peroxide Reactivity of Diiron(III) Complexes with the Syn N-Donor Ligand H2BPG2DEV

    Science.gov (United States)

    Friedle, Simone; Kodanko, Jeremy J.; Morys, Anna J.; Hayashi, Takahiro; Moënne-Loccoz, Pierre; Lippard, Stephen J.

    2009-01-01

    In order to model the syn disposition of histidine residues in carboxylate-bridged non-heme diiron enzymes, we prepared a new dinucleating ligand, H2BPG2DEV, that provides this geometric feature. The ligand incorporates biologically relevant carboxylate functionalities, which have not been explored as extensively as nitrogen-only analogs. Three novel oxo-bridged diiron(III) complexes [Fe2(μ-O)(H2O)2-(BPG2DEV)](ClO4)2 (6), [Fe2(μ-O)(μ-O CAriPrO)(BPG2DEV)](ClO4) (7), and [Fe2(μ-O)(μ-CO3)(BPG2DEV)] (8) were prepared. Single crystal X-ray structural characterization confirms that two pyridines are bound syn with respect to the Fe–Fe vector in these compounds. The carbonato-bridged complex 8 forms quantitatively from 6 in a rapid reaction with gaseous CO2 in organic solvents. A common maroon-colored intermediate (λmax = 490 nm; ε = 1500 M−1 cm−1) forms in reactions of 6, 7, or 8 with H2O2 and NEt3 in CH3CN/H2O solutions. Mass spectrometric analyses of this species, formed using 18O-labeled H2O2, indicate the presence of a peroxide ligand bound to the oxo-bridged diiron(III) center. The Mössbauer spectrum at 90 K of the EPR-silent intermediate exhibits a quadrupole doublet with δ. = 0.58 mm/s and ΔEQ = 0.58 mm/s. The isomer shift is typical for a peroxodiiron(III) species, but the quadrupole splitting parameter is unusually small compared to related complexes. These Mössbauer parameters are comparable to those observed for a peroxo intermediate formed in the reaction of reduced toluene/o-xylene monooxygenase hydroxylase (ToMOH) with dioxygen. Resonance Raman studies reveal an unusually low-energy O–O stretching mode in the peroxo intermediate that is consistent with a short diiron distance. Although peroxodiiron(III) intermediates generated from 6, 7, and 8 are poor O-atom transfer catalysts, they display highly efficient catalase activity, with turnover numbers up to 10,000. In contrast to hydrogen peroxide reactions of diiron(III) complexes that lack

  12. The crustal characteristics at syn- and/or post-rifting in eastern Shikoku basin by seismic reflection survey

    Science.gov (United States)

    Yamashita, M.; Takahashi, N.; Kodaira, S.; Takizawa, K.; No, T.; Miura, S.; Kaneda, Y.

    2008-12-01

    Imaging of the arc-backarc transition zone is important in relation to the backarc opening process. Shikoku Basin locates between the Kyushu-Palau Ridge and the Izu-Ogasawara Arc, which is an important area to reveal the opening evolution of the backarc basins as a part of the growth process of the Philippine Sea. The Shikoku Basin was in the backarc rifting and spreading stage during about 30-15 Ma (e.g. Okino et al., 1994). High P-wave velocity lower crust is identified in arc-backarc transition zone by refraction survey using OBSs (Takahashi et al., 2007). Japan Agency for Marine-Earth Science and Technology (JAMSTEC) carried out multi-channel seismic reflection (MCS) survey using 12,000 cu.in. air gun and 5 km streamer with 204 ch hydrophones in the Izu-Ogasawara region since 2004. We extracted and mapped the crustal characteristics from poststack and prestack depth migrated profiles. According to obtained profiles, the deformation structure with share component is recognized in arc-backarc transition zone, which located eastern side of Shikoku Basin from Zenisu Ridge to about 500 km south. The maximum width of this deformation zone is about 100 km. The relative displacement of horizon is little; however, it is strongly deformed from upper crust beneath seafloor. This deformation zone indicates the post- rifting activity in east side of Shikoku Basin. On the other hand, some knolls are indicated along the en- echelon arrangement from Izu-Ogasawara arc. Ishizuka et al. (2003) reported post-rifting volcanism with Miocene age in en-echelon arrangement. A part of these knolls are estimated to penetrate at syn-rifting and/or post-rifting stage in backarc opening. By comparing the both side of arc-backarc transition zone, we elucidate syn- and post-rifting effect in Shikoku Basin. We also carried out high density MCS surveys in Shikoku Basin in order to IODP proposal site for reconstruction of magmatic processes since Oligocene in rear arc. In this survey, we use new

  13. CRECIMIENTO Y DESARROLLO DE LA LIMA ÁCIDA (Citrus latifolia Tanaka, cv. Tahití, EN SUELOS CON LIMITACIONES POR PROFUNDIDAD EFECTIVA, EN UN BOSQUE SECO TROPICAL GROWTH AND DEVELOPMENT OF LIME (Citrus latifolia Tanaka, cv. Tahiti, IN SOILS WITH LIMITATIONS BY EFFECTIVE DEPTH IN A TROPICAL DRY FOREST

    Directory of Open Access Journals (Sweden)

    Gabriel Fernando Ochoa Agudelo

    2012-06-01

    Full Text Available Resumen. Se evaluó la evolución de la biomasa, la distribución diferencial de ésta entre los órganos y algunos parámetros del crecimiento y desarrollo, de la lima ácida (Citrus latifolia Tanaka, cv. Tahití, injertada sobre Carrizo y Kryder. El cultivo se estableció en suelos con limitaciones por profundidad efectiva (PE entre 10 y 20 cm; las evaluaciones se realizaron a los 24, 32 y 39 meses después del trasplante. Se debe tener presente que el crecimiento de las raíces está condicionado a los atributos edáficos en donde se establecen los cultivos, en especial los perennes, en cuyo caso existen requerimientos mínimos de PE para el adecuado desarrollo de los árboles; se establecieron diferencias entre la biomasa acumulada, como consecuencia de ésta limitación. Al comparar el crecimiento de las plantas con la PE se evidenció que los individuos que crecieron en suelos con PE de 20 cm, presentaron un desarrollo relativamente semejante a plantaciones sin limitaciones de este tipo; mientras que, en suelos con PE inferior a 10 cm, la respuesta fue 3 a 5 veces menor.Abstract. It was evaluated the evolution of biomass, its differential distribution among the organs and some parameters of growth and development of acid lime (Citrus latifolia Tanaka, cv. Tahiti, grafted on Carrizo and Kryder patterns. The plants were established in soils with limitations by its effective depth (ED, which ranged between 10 and 20 cm. Assessments were effectuated at 24, 32 and 39 months after transplantation. It is must to keep in mind that root growth is conditioned to the soil attributes of the site where the crops are established, especially in the case of perennials, which have requirements of minimum PE in order to achieve an adequate development. Differences were established between biomass accumulated as a result of the limitation in effective depth. When comparing the growth of plants with ED, we found that the individuals that grew up in soils with

  14. Analýza interakcí rodičovských genomů mezidruhového hybrida S. latifolia x S. viscosa na cytogenetické úrovni

    Czech Academy of Sciences Publication Activity Database

    Marková, Michaela

    2006-01-01

    Roč. 100, č. 5 (2006), s. 395-396 ISSN 0009-2770. [Mezioborové setkání mladých vědeckých a výzkumných pracovníků z oborů chemie, biochemie a molekulární biologie /6./. 14.06.2006-17.06.2006, Devět skal - Žďárské vrchy] R&D Projects: GA ČR(CZ) GA521/05/2076; GA ČR(CZ) GD204/05/H505 Institutional research plan: CEZ:AV0Z50040507 Keywords : interspecific hybrid * GISH * Silene Subject RIV: BO - Biophysics

  15. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    Energy Technology Data Exchange (ETDEWEB)

    Pavlis, T L; Serpa, L [Department of Geological Sciences, University of Texas at El Paso, El Paso, TX 7996 (United States); Miller, M [Department of Geological Sciences, University of Oregon, Eugene, OR 97403 (United States)], E-mail: tlpavlis@utep.edu

    2008-07-01

    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  16. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    International Nuclear Information System (INIS)

    Pavlis, T L; Serpa, L; Miller, M

    2008-01-01

    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  17. Rational design of syn-safencin, a novel linear antimicrobial peptide derived from the circular bacteriocin safencin AS-48.

    Science.gov (United States)

    Fields, Francisco R; Carothers, Katelyn E; Balsara, Rashna D; Ploplis, Victoria A; Castellino, Francis J; Lee, Shaun W

    2018-06-01

    Bacteriocins hold unprecedented promise as a largely untapped source of antibiotic alternatives in the age of multidrug resistance. Here, we describe the first approach to systematically design variants of a novel AS-48 bacteriocin homologue, which we have termed safencin AS-48, from Bacillus safensis, to gain insights into engineering improved activity of bacteriocins. A library of synthetic peptides in which systematic amino acid substitutions to vary the periodicity and abundance of polar, acidic, aliphatic, and hydrophobic residues were generated for a total of 96 novel peptide variants of a single bacteriocin candidate. Using this method, we identified nine synthetic safencin (syn-safencin) variants with broad and potent antimicrobial activities with minimal inhibitory concentrations (MIC) as low as 250 nM against E. coli, P. aeruginosa, X. axonopodis, and S. pyogenes with minimal cytotoxicity to mammalian cells. It is anticipated that the strategies we have developed will serve as general guides for tuning the specificity of a given natural bacteriocin compound for therapeutic specificity.

  18. Segmental allotetraploidy and allelic interactions in buffelgrass (Pennisetum ciliare (L.) Link syn. Cenchrus ciliaris L.) as revealed by genome mapping.

    Science.gov (United States)

    Jessup, R W; Burson, B L; Burow, O; Wang, Y W; Chang, C; Li, Z; Paterson, A H; Hussey, M A

    2003-04-01

    Linkage analyses increasingly complement cytological and traditional plant breeding techniques by providing valuable information regarding genome organization and transmission genetics of complex polyploid species. This study reports a genome map of buffelgrass (Pennisetum ciliare (L.) Link syn. Cenchrus ciliaris L.). Maternal and paternal maps were constructed with restriction fragment length polymorphisms (RFLPs) segregating in 87 F1 progeny from an intraspecific cross between two heterozygous genotypes. A survey of 862 heterologous cDNAs and gDNAs from across the Poaceae, as well as 443 buffelgrass cDNAs, yielded 100 and 360 polymorphic probes, respectively. The maternal map included 322 RFLPs, 47 linkage groups, and 3464 cM, whereas the paternal map contained 245 RFLPs, 42 linkage groups, and 2757 cM. Approximately 70 to 80% of the buffelgrass genome was covered, and the average marker spacing was 10.8 and 11.3 cM on the respective maps. Preferential pairing was indicated between many linkage groups, which supports cytological reports that buffelgrass is a segmental allotetraploid. More preferential pairing (disomy) was found in the maternal than paternal parent across linkage groups (55 vs. 38%) and loci (48 vs. 15%). Comparison of interval lengths in 15 allelic bridges indicated significantly less meiotic recombination in paternal gametes. Allelic interactions were detected in four regions of the maternal map and were absent in the paternal map.

  19. Pre- and syn-Ross orogenic granitoids at Drake Head and Kartografov Island, Oates Coast, northern Victoria Land, East Antarctica

    International Nuclear Information System (INIS)

    Adams, C.J.; Roland, N.W.

    2002-01-01

    The majority of the Oates Coast, northern Victoria Land granitoids, typified by those at Drake Head and Kartografov Island (Harald Bay), are monzogranites with lesser granodiorites and minor quartz-monzodiorite and syenogranite. All are plagioclase-K-feldspar-biotite granitoids with additional muscovite, garnet and/or hornblende, and are subalkaline and peraluminous. Berg Granite typifies the early Ordovician, Granite Harbour Instrusive (GHI) suite of the Ross Orogen at the Oates Coast. Granitoids from Kartografov Island have higher amounts of Fe+Mg+Ti and an ambiguous Rb-Sr geochronology: they could be either pre-Ross Orogeny in age, or syn-Ross Orogeny and representing a lower structural level of GHI. The Drake Head granite gneiss has a fractionated leuco-granite composition similar to Berg Granite, and is intruded by granite and granodiorite. Rb-Sr ages indicate that all are Neoproterozoic, although the granite gneiss result is probably an errorchron age, reflecting its less uniform nature (granodiorite:649 ± 30 Ma, initial ratio 0.7065 +/- 6; granite gneiss: 682 ± 140 Ma, initial ratio 0.7107 ± 50). These late Neoproterozoic granitoids provide a source for distinctive detrital zircon age components in extensive early Paleozoic turbidites of Australia-New Zealand-Antarctica. (author). 24 refs., 5 figs., 1 tab

  20. Inversion of Configuration at the Phosphorus Nucleophile in the Diastereoselective and Enantioselective Synthesis of P-Stereogenic syn-Phosphiranes from Chiral Epoxides.

    Science.gov (United States)

    Muldoon, Jake A; Varga, Balázs R; Deegan, Meaghan M; Chapp, Timothy W; Eördögh, Ádám M; Hughes, Russell P; Glueck, David S; Moore, Curtis E; Rheingold, Arnold L

    2018-04-23

    Nucleophilic substitution results in inversion of configuration at the electrophilic carbon center (S N 2) or racemization (S N 1). The stereochemistry of the nucleophile is rarely considered, but phosphines, which have a high barrier to pyramidal inversion, attack electrophiles with retention of configuration at P. Surprisingly, cyclization of bifunctional secondary phosphine alkyl tosylates proceeded under mild conditions with inversion of configuration at the nucleophile to yield P-stereogenic syn-phosphiranes. DFT studies suggested that the novel stereochemistry results from acid-promoted tosylate dissociation to yield an intermediate phosphenium-bridged cation, which undergoes syn-selective cyclization. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  1. Syn-Selective Synthesis of β-Branched α-Amino Acids by Alkylation of Glycine-Derived Imines with Secondary Sulfonates.

    Science.gov (United States)

    Lou, Sha; McKenna, Grace M; Tymonko, Steven A; Ramirez, Antonio; Benkovics, Tamas; Conlon, David A; González-Bobes, Francisco

    2015-10-16

    A syn-selective synthesis of β-branched α-amino acids has been developed based on the alkylation of glycine imine esters with secondary sulfonates. The potassium counterion for the enolate, the solvent, and the leaving group on the electrophile were key levers to maximize the diasteroselectivity of the alkylation. The optimized conditions enabled a straightforward preparation of a number of β-branched α-amino acids that can be challenging to obtain.

  2. Acquiring research-grade ERPs on a shoestring budget: A comparison of a modified Emotiv and commercial SynAmps EEG system.

    Science.gov (United States)

    Barham, Michael P; Clark, Gillian M; Hayden, Melissa J; Enticott, Peter G; Conduit, Russell; Lum, Jarrad A G

    2017-09-01

    This study compared the performance of a low-cost wireless EEG system to a research-grade EEG system on an auditory oddball task designed to elicit N200 and P300 ERP components. Participants were 15 healthy adults (6 female) aged between 19 and 40 (M = 28.56; SD = 6.38). An auditory oddball task was presented comprising 1,200 presentations of a standard tone interspersed by 300 trials comprising a deviant tone. EEG was simultaneously recorded from a modified Emotiv EPOC and a NeuroScan SynAmps RT EEG system. The modifications made to the Emotiv system included attaching research grade electrodes to the Bluetooth transmitter. Additional modifications enabled the Emotiv system to connect to a portable impedance meter. The cost of these modifications and portable impedance meter approached the purchase value of the Emotiv system. Preliminary analyses revealed significantly more trials were rejected from data acquired by the modified Emotiv compared to the SynAmps system. However, the ERP waveforms captured by the Emotiv system were found to be highly similar to the corresponding waveform from the SynAmps system. The latency and peak amplitude of N200 and P300 components were also found to be similar between systems. Overall, the results indicate that, in the context of an oddball task, the ERP acquired by a low-cost wireless EEG system can be of comparable quality to research-grade EEG acquisition equipment. © 2017 Society for Psychophysiological Research.

  3. Heterobimetallic transition metal/rare earth metal bifunctional catalysis: a Cu/Sm/Schiff base complex for syn-selective catalytic asymmetric nitro-Mannich reaction.

    Science.gov (United States)

    Handa, Shinya; Gnanadesikan, Vijay; Matsunaga, Shigeki; Shibasaki, Masakatsu

    2010-04-07

    The full details of a catalytic asymmetric syn-selective nitro-Mannich reaction promoted by heterobimetallic Cu/Sm/dinucleating Schiff base complexes are described, demonstrating the effectiveness of the heterobimetallic transition metal/rare earth metal bifunctional catalysis. The first-generation system prepared from Cu(OAc)(2)/Sm(O-iPr)(3)/Schiff base 1a = 1:1:1 with an achiral phenol additive was partially successful for achieving the syn-selective catalytic asymmetric nitro-Mannich reaction. The substrate scope and limitations of the first-generation system remained problematic. After mechanistic studies on the catalyst prepared from Sm(O-iPr)(3), we reoptimized the catalyst preparation method, and a catalyst derived from Sm(5)O(O-iPr)(13) showed broader substrate generality as well as higher reactivity and stereoselectivity compared to Sm(O-iPr)(3). The optimal system with Sm(5)O(O-iPr)(13) was applicable to various aromatic, heteroaromatic, and isomerizable aliphatic N-Boc imines, giving products in 66-99% ee and syn/anti = >20:1-13:1. Catalytic asymmetric synthesis of nemonapride is also demonstrated using the catalyst derived from Sm(5)O(O-iPr)(13).

  4. Syn-depositional deformation of the late Zechstein evaporites on the Friesland Platform capturing the early life of a salt giant

    Science.gov (United States)

    Raith, Alexander; Urai, Janos L.

    2017-04-01

    It is often thought that the deposition of the Zechstein of NE Netherlands took place in a tectonically quiet environment and experienced complex deformation later. While early deformation structures were mostly overprinted by later salt flow, we focused on the Friesland platform, which was only weakly affected by later salt tectonics. In this study, we analyzed the present structures and deformation history with the help of 3D seismic and well data. Results show that the ZIII AC stringer contains (i) a regional network of thicker zones (TZ), and (ii) a network of zones where the stringers are absent, interpreted as ruptures formed by salt flow. These ruptures in many cases mark a clear vertical shift of the sub-horizontal stringer. Mapping of the base salt and top salt reflectors shows that the ruptures often coincide with faults at base Zechstein level, and that the thickness of the post-stringer rock salt layers is thicker where the stringers are lower, while the total salt thickness is relatively constant. We interpret these structures as evidence for movement on the faults at base salt, during Zechstein times, suggesting that late Zechstein deposition was syn-tectonic. Spatial correlation of TZ and these syn-depositional depressions also indicate syn-depositional or very early development of thickening in the ZIII-AC stringer. They are interpreted to reflect the interaction of anhydrite dewatering pathways and dissolution of salt below fracture systems in the stringer localized by the active shear zones in the salt.

  5. Swelling and Degradation of Calcium-Pectic Gel Particles Made of Pectins of Silene vulgaris and Lemna minor Сallus Cultures at Different Concentrations of Pectinase in an Artificial Colon Environment

    Directory of Open Access Journals (Sweden)

    Anatoly A. Shubakov

    2018-03-01

    Full Text Available Spherical calcium-pectic gel particles (CaPGPs were obtained from pectins of callus cultures (CC of campion Silene vulgaris (silenan and duckweed Lemna minor (lemnan, as well as from commercial apple and citrus pectins by the method of ionotropic gelation. We studied the morphological characteristics of the obtained gel particles and found that the largest gel particles were formed from citrus pectin (CP, and the densest gel particles were formed from lemnan pectin (LP. The swelling and degradation of CaPGPs were comparatively evaluated by incubation in a simulated gastrointestinal environment. The swelling and degradation of CaPGPs formed from pectins of the silenan and lemnan callus cultures were studied at different concentrations of pectinase (0.4, 0.8 and 1.7 mg/ml in the simulated fluid of the colon. It has been established that the CaPGPs obtained from lemnan are more resistant to degradation in the simulated colon fluid than CaPGP obtained from silenan. It was shown that the concentration of pectinase in the simulated fluid of the colon and the type of pectin affect the degradability of CaPGPs formed on the basis of pectins of callus cultures.

  6. Syn for sagn

    DEFF Research Database (Denmark)

    Nyvang, Caroline

    2013-01-01

    and a representative of the early folkloristic movement, and his engagement in three different photographical projects during the years 1895—1927. Through a study of the actual pictures as well as readings of Olrik’s personal letters, applications for funding, and academic writings, two main arguments for the use...... of photography are identified: one line of argumentation pertains to the potential of photography as a conservatory technology; another series of reasons promotes photographs as a particularly well-suited medium for conveying the past in a holistic way. Furthermore, the article shows how these arguments hinge...

  7. Revision of the Megaperidae Manter, 1934 n. comb. (Syn. Apocreadiidae Skrjabin, 1942) including a reorganization of the Schistorchiinae Yamaguti, 1942.

    Science.gov (United States)

    Blend, Charles K; Karar, Yasser F M; Dronen, Norman O

    2017-11-28

    Modified and/or new keys to the four subfamilies now recognized within the Megaperidae Manter, 1934 n. comb. (Syn. Apocreadiidae Skrjabin, 1942) as well as the genera within each subfamily are presented. Two new genera, Paraschistorchis n. gen. and Plesioschistorchis n. gen., both within the Schistorchiinae Yamaguti, 1942, are erected and keys are provided to the species considered in both new genera-distinguished by possessing caeca that end either in separate ani or blindly. Plesioschistorchis callyodontis (Yamaguti, 1942) n. comb. and Plesioschistorchis haridis (Nagaty, 1957) n. comb. are re-described from new material collected from the common parrotfish, Scarus psittacus Forsskål (Perciformes: Scaridae), inhabiting the Red Sea off Egypt; S. psittacus represents a new host record for both species. The taxonomic status of Schistorchis sensu stricto Lühe, 1906 is examined and revised, a key to the four species we consider in this genus offered, and the monotypic genus Megacreadium Nagaty, 1956 declared a junior synonym of Schistorchis. Members of Schistorchis sensu stricto possess a unique "complex" (i.e. highly cellular/glandular) instead of "simple" (i.e. entirely muscular) type of oral sucker that is quite large in relation to body size; an elongate, somewhat sub-rectangular-shaped body; 5+ testes arranged in at least two rows; caeca that open via separate ani; a long post-testicular region; a median genital pore either at the anterior margin of or just anterior to the ventral sucker; and species of Schistorchis sensu stricto parasitize the intestine of marine fish within the Order Tetraodontiformes Berg. With the revision of this genus, we re-describe Schistorchis carneus Lühe, 1906 from the lower and mid-intestine of the white-spotted puffer, Arothron hispidus (Linnaeus) (Tetraodontiformes: Tetraodontidae), collected in the Red Sea off Egypt. Finally, a plea is made for further study of the Megaperidae n. comb. focusing, in particular, on the following

  8. A spore counting method and cell culture model for chlorine disinfection studies of Encephalitozoon syn. Septata intestinalis.

    Science.gov (United States)

    Wolk, D M; Johnson, C H; Rice, E W; Marshall, M M; Grahn, K F; Plummer, C B; Sterling, C R

    2000-04-01

    The microsporidia have recently been recognized as a group of pathogens that have potential for waterborne transmission; however, little is known about the effects of routine disinfection on microsporidian spore viability. In this study, in vitro growth of Encephalitozoon syn. Septata intestinalis, a microsporidium found in the human gut, was used as a model to assess the effect of chlorine on the infectivity and viability of microsporidian spores. Spore inoculum concentrations were determined by using spectrophotometric measurements (percent transmittance at 625 nm) and by traditional hemacytometer counting. To determine quantitative dose-response data for spore infectivity, we optimized a rabbit kidney cell culture system in 24-well plates, which facilitated calculation of a 50% tissue culture infective dose (TCID(50)) and a minimal infective dose (MID) for E. intestinalis. The TCID(50) is a quantitative measure of infectivity and growth and is the number of organisms that must be present to infect 50% of the cell culture wells tested. The MID is as a measure of a system's permissiveness to infection and a measure of spore infectivity. A standardized MID and a standardized TCID(50) have not been reported previously for any microsporidian species. Both types of doses are reported in this paper, and the values were used to evaluate the effects of chlorine disinfection on the in vitro growth of microsporidia. Spores were treated with chlorine at concentrations of 0, 1, 2, 5, and 10 mg/liter. The exposure times ranged from 0 to 80 min at 25 degrees C and pH 7. MID data for E. intestinalis were compared before and after chlorine disinfection. A 3-log reduction (99.9% inhibition) in the E. intestinalis MID was observed at a chlorine concentration of 2 mg/liter after a minimum exposure time of 16 min. The log(10) reduction results based on percent transmittance-derived spore counts were equivalent to the results based on hemacytometer-derived spore counts. Our data

  9. Syn- and Post-Accretionary Structures in the Neoproterozoic Central Allaqi-Heiani Suture Zone, Southeastern Egypt

    Science.gov (United States)

    Abdeen, M. M.; Abdelghaffar, A. A.

    2012-04-01

    The Allaqi-Heiani suture (AHS) is the western part of the main Allaqi-Heiani-Gerf-Onib-Sol Hamed-Yanbu suture and represents one of the Neoproterozoic, arc-arc sutures in the Arabian-Nubian Shield (ANS). It separates the ca. 750 Ma South Eastern Desert terrane in the north from the ca. 830-720 Ma Gabgaba terrane in the south. The AHS is a deformed belt of ophiolitic rocks, syn-tectonic granitoids and metasediments. The central AHS zone is divided into three structural domains. The western domain (Ι) is characterized by NNE low thrusts and SSW-vergent folds. The central domain (ΙΙ) includes upright tight to isoclinal NNW-SSE oriented folds and transpressional faults. The eastern domain (ΙΙΙ) shows NNW-SSE oriented open folds. Structural analysis indicates that the area has a poly-phase deformation history involving at least two events. Event D1 was an N-S to NNE-SSW regional shortening generating the SSW-verging folds and the NNE dipping thrusts. Event D2 was an ENE-WSW shortening producing NNW-SSE oriented folds in the central and eastern parts of the study area and reactivating older thrusts with oblique-slip reverse fault movement. The tectonic evolution of the area involves two episodes of collision: an early collision between the South Eastern Desert terrane and the Gabgaba terrane along the AHS after the consumption of a basin floored by oceanic crust above a north-dipping subduction zone; and a later collision between East- and West-Gondwanas at ca. 750-650 Ma, leading to the closure of the Mozambique Ocean. This collision deformed the AHS along N-S trending shortening zones and produced NW-SE and NE-SW oriented sinistral and dextral transpressional faults, respectively. The early collision episode is related to the terrane accretion during the early Pan-African orogen, while the later phase is related to a late Pan-African or Najd orogen.

  10. EVALUACIÓN DE LA CINÉTICA DE ADSORCIÓN DE Zn2+ Y Cd2+ A PARTIR DE SOLUCIONES UNITARIAS Y BINARIAS POR RAÍCES DE Eichhornia crassipes Y Typha latifolia

    Directory of Open Access Journals (Sweden)

    Carolina Martínez

    2013-01-01

    Full Text Available In this work, the kinetic modeling of adsorption of Zn 2+ and Cd2+ in roots of Typha latifolia (cattail and Eichhornia crassipes (water hyacinth were evaluated. The study was done using solutions containing one or both ions. The experiments were performed using carbon paste electrodes modified with the roots. The model that best describes the kinetics of both ions in the two roots is the pseudo second order’s one. We also determined that both ions accumulate faster and in greater amounts on Eichhornia crassipes. Indeed, according to potentiometric titration and infrared spectra Fourier transformation, the number of adsorption sites is higher in this root. In the same manner, it was shown that both roots accumulate more Cd 2+ than Zn2+, and when the adsorption is made from a mixture, cadmium inhibits the accumulation of zinc.

  11. KEMAMPUAN TANAMAN EKOR KUCING (Typha latifolia DAN PURUN TIKUS (Eleocharis dulcis DALAM PENURUNAN KONSENTRASI Fe DAN Mn DARI AIR LIMBAH PIT BARAT PT PAMAPERSADA NUSANTARA DISTRIK KCMB KABUPATEN BANJAR

    Directory of Open Access Journals (Sweden)

    Muhammad Sulthoni A. D. N.

    2016-10-01

    Full Text Available Research on the Ability Test Ekor kucing Plants (Typha latifolia and Purun tikus (Eleocharis dulcis in Fe and Mn concentrations decrease from the West Pit Wastewater PT Pamapersada District KCMB Kabupaten Banjar. This research held in April 2013 to August 2013. The purpose of this study was to determine the ability of plants Ekor kucing and plants Purun tikus in lowering the concentration of  Fe and Mn from waste coal mine and phytoremediation mechanisms that occur. This research uses experimental and survey methods. Results showed that plants Ekor kucing  and Purun tikus are hiperakumulator plants to Fe and Mn in which the plant is able to absorb Fe respectively by 284% and 92%. For Mn, respectively 207% and 1277%. Phytoremediation mechanisms with Ekor kucing for Fe is fitostabilization  and Purun tikus is fitoextraction, while the Mn is fitoextraction.

  12. Assessment of pre-crisis and syn-crisis seismic hazard at Campi Flegrei and Mt. Vesuvius volcanoes, Campania, southern Italy

    Science.gov (United States)

    Convertito, Vincenzo; Zollo, Aldo

    2011-08-01

    In this study, we address the issue of short-term to medium-term probabilistic seismic hazard analysis for two volcanic areas, Campi Flegrei caldera and Mt. Vesuvius in the Campania region of southern Italy. Two different phases of the volcanic activity are considered. The first, which we term the pre-crisis phase, concerns the present quiescent state of the volcanoes that is characterized by low-to-moderate seismicity. The second phase, syn-crisis, concerns the unrest phase that can potentially lead to eruption. For the Campi Flegrei case study, we analyzed the pattern of seismicity during the 1982-1984 ground uplift episode (bradyseism). For Mt. Vesuvius, two different time-evolutionary models for seismicity were adopted, corresponding to different ways in which the volcano might erupt. We performed a site-specific analysis, linked with the hazard map, to investigate the effects of input parameters, in terms of source geometry, mean activity rate, periods of data collection, and return periods, for the syn-crisis phase. The analysis in the present study of the pre-crisis phase allowed a comparison of the results of probabilistic seismic hazard analysis for the two study areas with those provided in the Italian national hazard map. For the Mt. Vesuvius area in particular, the results show that the hazard can be greater than that reported in the national hazard map when information at a local scale is used. For the syn-crisis phase, the main result is that the data recorded during the early months of the unrest phase are substantially representative of the seismic hazard during the whole duration of the crisis.

  13. Purine 3':5'-cyclic nucleotides with the nucleobase in a syn orientation: cAMP, cGMP and cIMP.

    Science.gov (United States)

    Řlepokura, Katarzyna Anna

    2016-06-01

    Purine 3':5'-cyclic nucleotides are very well known for their role as the secondary messengers in hormone action and cellular signal transduction. Nonetheless, their solid-state conformational details still require investigation. Five crystals containing purine 3':5'-cyclic nucleotides have been obtained and structurally characterized, namely adenosine 3':5'-cyclic phosphate dihydrate, C10H12N5O6P·2H2O or cAMP·2H2O, (I), adenosine 3':5'-cyclic phosphate 0.3-hydrate, C10H12N5O6P·0.3H2O or cAMP·0.3H2O, (II), guanosine 3':5'-cyclic phosphate pentahydrate, C10H12N5O7P·5H2O or cGMP·5H2O, (III), sodium guanosine 3':5'-cyclic phosphate tetrahydrate, Na(+)·C10H11N5O7P(-)·4H2O or Na(cGMP)·4H2O, (IV), and sodium inosine 3':5'-cyclic phosphate tetrahydrate, Na(+)·C10H10N4O7P(-)·4H2O or Na(cIMP)·4H2O, (V). Most of the cyclic nucleotide zwitterions/anions [two from four cAMP present in total in (I) and (II), cGMP in (III), cGMP(-) in (IV) and cIMP(-) in (V)] are syn conformers about the N-glycosidic bond, and this nucleobase arrangement is accompanied by Crib-H...Npur hydrogen bonds (rib = ribose and pur = purine). The base orientation is tuned by the ribose pucker. An analysis of data obtained from the Cambridge Structural Database made in the context of syn-anti conformational preferences has revealed that among the syn conformers of various purine nucleotides, cyclic nucleotides and dinucleotides predominate significantly. The interactions stabilizing the syn conformation have been indicated. The inter-nucleotide contacts in (I)-(V) have been systematized in terms of the chemical groups involved. All five structures display three-dimensional hydrogen-bonded networks.

  14. The genomics of plant sex chromosomes

    Czech Academy of Sciences Publication Activity Database

    Vyskot, Boris; Hobza, Roman

    2015-01-01

    Roč. 236, JUL 2015 (2015), s. 126-135 ISSN 0168-9452 R&D Projects: GA ČR(CZ) GBP501/12/G090; GA ČR(CZ) GAP501/12/2220 Institutional support: RVO:68081707 Keywords : Y-CHROMOSOME * SILENE-LATIFOLIA * DIOECIOUS PLANT Subject RIV: BO - Biophysics Impact factor: 3.362, year: 2015

  15. Structural, functional, and evolutionary features of plant sex chromosomes

    Czech Academy of Sciences Publication Activity Database

    Vyskot, Boris; Hobza, Roman; Kejnovský, Eduard; Žlůvová, Jitka; Janoušek, Bohuslav

    2009-01-01

    Roč. 17, č. 4 (2009), s. 547 ISSN 0967-3849. [17th International Chromosome Conference. 23.06.2009-26.06.2009, Boone] R&D Projects: GA MŠk(CZ) LC06004 Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702 Keywords : sex chromosomes * Silene latifolia * epigenetic Subject RIV: BO - Biophysics

  16. Histone H4 acetylation patterns during seed germination and early plant development

    Czech Academy of Sciences Publication Activity Database

    Hodurková, Jaromíra; Vyskot, Boris

    2003-01-01

    Roč. 46, č. 1 (2003), s. 23-28 ISSN 0006-3134 R&D Projects: GA AV ČR IAA5004901 Institutional research plan: CEZ:AV0Z5004920 Keywords : epigenetic modification * Silene latifolia * transcription Subject RIV: BO - Biophysics Impact factor: 0.919, year: 2003

  17. Fully automated pipeline for detection of sex linked genes using RNA-Seq data

    Czech Academy of Sciences Publication Activity Database

    Michalovová, Monika; Kubát, Zdeněk; Hobza, Roman; Vyskot, Boris; Kejnovský, Eduard

    2015-01-01

    Roč. 16, č. 78 (2015) ISSN 1471-2105 R&D Projects: GA ČR(CZ) GBP501/12/G090; GA MŠk(CZ) LM2010005 Institutional support: RVO:68081707 Keywords : SILENE-LATIFOLIA * RUMEX-ACETOSA * Y-CHROMOSOME Subject RIV: BO - Biophysics; EF - Botanics (UEB-Q) Impact factor: 2.435, year: 2015

  18. Salvadorianae. III. Una descripció prelinneana de Silene niceensis All., deguda a Jaume Salvador i Pedrol, a l'edició de 1686 del Botanicum Monspeliense de Pèire Magnol

    Directory of Open Access Journals (Sweden)

    Camarasa, Josep M.

    2000-12-01

    Full Text Available Silene niceensis All. (Cariophillaceae is a plant found on litoral sands of Western Mediterranian and also of Iberian Atlantic shores from Gibraltar to the Rias Baixas and in some places in Greece. It had been described twice in prelinnean times but Linné has neglected it in his works. First prelinnean description, though published by Pierre Magnol in the Appedix to the second edition (1686 of Botanicum monspeliense,has been wrote on the basis of materials and a short description sent to Magnol by Jaume Salvador i Pedrol. One specimen of this plant in Salvador Herbarium hold a short description that could be the original one by Jaume Salvador. The second one was published on a different name by Tournefort in Institutiones Rei herbariae. It is also one specimen of S. niceensisAll. in Salvador Herbarium under this identity. Pourret, studying this herbarium to put on etiquets the linnean name of each specimen (1792-98, realize the specific identity of both S. niceensis All. specimens but ignoring the description published by Allioni in 1773 he give them the new name of S. arenaria Pourr. Also Desfontaines described under the name of S. arenaria Desf. in his Flora Atlantica (1798-99 the same species on the basis of specimens collected near the Gibraltar Strait. Both. Pourrett and Desfontaines names, or today invalid and under sinonimy.

    La cariofil làcia Silene niceensis All. pròpia dels sorrats litorals de la Mediterrània occidental i present també a les costes atlàntiques ibèriques. des de l' estret de Gibraltar fins a les Rias Baixas i en alguna localitat grega, havia estar descrita al menys dues vegades temps prelinneans malgrat que Linné mateix la ignorés a les seves obres. La primera descripció prelinneana. bé que publicada por Péire Magnol a l’apèndix a la segona edició del seu Botanicum monspeliense,. es feu sobre la base de materials i fins i tot d

  19. Efficient Synthesis of Differentiated syn-1,2-Diol Derivatives by Asymmetric Transfer Hydrogenation-Dynamic Kinetic Resolution of α-Alkoxy-Substituted β-Ketoesters.

    Science.gov (United States)

    Monnereau, Laure; Cartigny, Damien; Scalone, Michelangelo; Ayad, Tahar; Ratovelomanana-Vidal, Virginie

    2015-08-10

    Asymmetric transfer hydrogenation was applied to a wide range of racemic aryl α-alkoxy-β-ketoesters in the presence of well-defined, commercially available, chiral catalyst Ru(II) -(N-p-toluenesulfonyl-1,2-diphenylethylenediamine) and a 5:2 mixture of formic acid and triethylamine as the hydrogen source. Under these conditions, dynamic kinetic resolution was efficiently promoted to provide the corresponding syn α-alkoxy-β-hydroxyesters derived from substituted aromatic and heteroaromatic aldehydes with a high level of diastereoselectivity (diastereomeric ratio (d.r.)>99:1) and an almost perfect enantioselectivity (enantiomeric excess (ee)>99 %). Additionally, after extensive screening of the reaction conditions, the use of Ru(II) - and Rh(III) -tethered precatalysts extended this process to more-challenging substrates that bore alkenyl-, alkynyl-, and alkyl substituents to provide the corresponding syn α-alkoxy-β-hydroxyesters with excellent enantiocontrol (up to 99 % ee) and good to perfect diastereocontrol (d.r.>99:1). Lastly, the synthetic utility of the present protocol was demonstrated by application to the asymmetric synthesis of chiral ester ethyl (2S)-2-ethoxy-3-(4-hydroxyphenyl)-propanoate, which is an important pharmacophore in a number of peroxisome proliferator-activated receptor α/γ dual agonist advanced drug candidates used for the treatment of type-II diabetes. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. SynPAnal: software for rapid quantification of the density and intensity of protein puncta from fluorescence microscopy images of neurons.

    Directory of Open Access Journals (Sweden)

    Eric Danielson

    Full Text Available Continuous modification of the protein composition at synapses is a driving force for the plastic changes of synaptic strength, and provides the fundamental molecular mechanism of synaptic plasticity and information storage in the brain. Studying synaptic protein turnover is not only important for understanding learning and memory, but also has direct implication for understanding pathological conditions like aging, neurodegenerative diseases, and psychiatric disorders. Proteins involved in synaptic transmission and synaptic plasticity are typically concentrated at synapses of neurons and thus appear as puncta (clusters in immunofluorescence microscopy images. Quantitative measurement of the changes in puncta density, intensity, and sizes of specific proteins provide valuable information on their function in synaptic transmission, circuit development, synaptic plasticity, and synaptopathy. Unfortunately, puncta quantification is very labor intensive and time consuming. In this article, we describe a software tool designed for the rapid semi-automatic detection and quantification of synaptic protein puncta from 2D immunofluorescence images generated by confocal laser scanning microscopy. The software, dubbed as SynPAnal (for Synaptic Puncta Analysis, streamlines data quantification for puncta density and average intensity, thereby increases data analysis throughput compared to a manual method. SynPAnal is stand-alone software written using the JAVA programming language, and thus is portable and platform-free.

  1. Déformation gravitaire synsédimentaire sur une marge passive. Modélisation analogique et application au Golfe de Guinée.

    OpenAIRE

    Mauduit , Thomas

    1996-01-01

    Mémoires de Géosciences Rennes, n °83 , 260p. ISBN : 2-905532-82-3; La marge passive ouest africaine, postérieure à l'ouverture de l'Atlantique sud, offre un exemple très spectaculaire de glissement gravitaire synsédimentaire post-aptien à actuel sur une épaisse couche d'évaporites. Les données issues de l'exploration pétrolière intensive menée depuis plus de 20 années servent ici de base pour une analyse cinématique et mécanique des structures caractéristiques résultant des interactions entr...

  2. A study of the distribution, structure and seismic stratigraphy of syn-breakup and post-breakup sediments in the Faroe sector of the Faroe-Shetland Basin

    DEFF Research Database (Denmark)

    Olavsdottir, Jana

    Emplacement of the Cenozoic sediments in the Faroese sector of the Faroe-Shetland Basin appear to be controlled by decelerating thermal subsidence of the basin, and local uplift of sediment source areas. However, the actual distribution of sediments appears to be controlled by re-activation...... of older, Mesozoic structural elements controlling the sediment path way and restricting the depositional areas. The structural elements being re-activated at different times causing considerable structural complexity. Understanding older, Mesozoic, structural elements control on sedimentation...... is a potential tool understanding deviations from “normal” thermal subsidence and for predicting the prospectivity in syn- and post-rift succession in the Faroe-Shetland Basin. On top of the basalt in the Faroe-Shetland Basin there is deposited up to 3.5 km thick sedimentary package, which led into the basin...

  3. Chemical communication in termites: syn-4,6-dimethylundecan-1-ol as trail-following pheromone, syn-4,6-dimethylundecanal and (5E)-2,6,10-trimethylundeca-5,9-dienal as the respective male and female sex pheromones in Hodotermopsis sjoestedti (Isoptera, Archotermopsidae).

    Science.gov (United States)

    Lacey, Michael J; Sémon, Etienne; Krasulová, Jana; Sillam-Dussès, David; Robert, Alain; Cornette, Richard; Hoskovec, Michal; Záček, Petr; Valterová, Irena; Bordereau, Christian

    2011-12-01

    The trail-following pheromone and sex pheromones were investigated in the Indomalayan termite Hodotermopsis sjoestedti belonging to the new family Archotermopsidae. Gas chromatography coupled to mass spectrometry (GC-MS) after solid phase microextraction (SPME) of the sternal gland secretion of pseudergates and trail-following bioassays demonstrated that the trail-following pheromone of H. sjoestedti was syn-4,6-dimethylundecan-1-ol, a new chemical structure for termite pheromones. GC-MS after SPME of the sternal gland secretion of alates also allowed the identification of sex-specific compounds. In female alates, the major sex-specific compound was identified as (5E)-2,6,10-trimethylundeca-5,9-dienal, a compound previously identified as the female sex pheromone of the termite Zootermopsis nevadensis. In male alates, the major sex-specific compound was identified as syn-4,6-dimethylundecanal, a homolog of syn-4,6-dimethyldodecanal, which has previously been confirmed as the male sex pheromone of Z. nevadensis. The presence of sex-specific compounds in alates of H. sjoestedti strongly suggests for this termite the presence of sex-specific pairing pheromones which were only known until now in Z. nevadensis. Our results showed therefore a close chemical relationship between the pheromones of the taxa Hodotermopsis and Zootermopsis and, in contrast, a clear difference with the taxa Stolotermes and Porotermes, which is in total agreement with the recent creation of the families Archotermopsidae and Stolotermitidae as a substitute for the former family Termopsidae. Copyright © 2011 Elsevier Ltd. All rights reserved.

  4. Tectono-stratigraphy of the Lower Cretaceous Syn-rift Succession in Bongor Basin, Chad: Insights into Structural Controls on Sedimentary Infill of a Continental Rift

    Science.gov (United States)

    Chen, C.; Ji, Y.; Wei, X.; An, F.; Li, D.; Zhu, R.

    2017-12-01

    In a rift basin, the dispersal and deposition of sediments is significantly influenced by the paleo-topography, which is highly controlled by the evolution and interaction of normal faults in different scales. To figure out the impact of faults evolution and topographic elements towards sedimentary fillings, we investigated the Lower Cretaceous syn-rift package in Bongor Basin, south of Chad Republic. Constrained with 2D and 3D seismic data, core data and logging information, a sequence stratigraphy architecture and a variety of depositional systems are recognized, including fan delta, braided delta, sub-lacustrine fan and lacustrine system. We also studied the spatial distribution and temporal evolution of clastic depositional systems of the syn-rift complex, and valuable insights into structural controls of sequence architectures and depositional systems are provided. During the evolution of rift basin, marginal structures such as relay ramps and strike-slipping boundary transfer fault are major elements that influence the main sediments influx points. Release faults in the hanging-wall could form a differential evolution pattern for accommodation, and effect the deposition systems in the early stage of rift evolution. Oblique crossing-faults, minor faults that develop on the erosional uplift in the interior foot-wall, would cut the uplifts and provide faulted-through paths for the over-filled sediments in the accommodation space, making it possible to develop sedimentary systems towards the center of basin during the early stage of rift evolution, although the origins of such minor faults still need further discussion. The results of this research indicate that different types of fault interactions have a fundamental control on patterns of sediment dispersal during early stage of rift basins.

  5. Stereochemical probes of bovine plasma amine oxidase: evidence for mirror image processing and a syn abstraction of hydrogens from C-1 and C-2 of dopamine

    International Nuclear Information System (INIS)

    Farnum, M.F.; Klinman, J.P.

    1986-01-01

    Bovine plasma amine oxidase (PAO) has previously been shown to catalyze a nonstereospecific loss of tritium from [2(R)- 3 H]- and [2(S)- 3 H]dopamines, attributed to multiple, catalytically active binding sites for substrate. Analysis of products formed from incubation of dopamine with PAO in tritiated water indicates a stereospecific, pro-R, incorporation of label at C-2. Thus, tritium washout (random) and washin (pro-R) are not the microscopic reverse of one another. We conclude that the (enamine) intermediates leading to tritium washin are nonequivalently bound. The observation of pro-R incorporation has provided a straightforward synthetic route to [1(R)- 2 H,2(R)- 3 H]- and [1(S)- 2 H,2(R)- 3 H]dopamines, which upon oxidation with PAO are expected to be processed preferentially by 1S and 1R cleavage, respectively. From previously measured isotope effects, we predict the loss of tritium from the 1(R)-2H and 1(S)-2H samples to be 74:8 for a syn relationship between cleavage at C-1 and C-2 vs. 21:90 for an anti relationship. The observation of a 68:18 ratio at 100% conversion provides strong evidence for a syn cleavage. The data support a mechanism in which a single base catalyzes a 1,3-prototrophic shift of hydrogen from C-1 of the substrate to cofactor, followed by exchange from C-2. Additionally, the results confirm the presence of alternate binding modes for dopamine at the active site of bovine plasma amine oxidase. This interaction of dopamine with plasma amine oxidase is a rare example of mirror-image catalysis in which a single substrate has two functional binding orientations on an enzyme surface

  6. Paléocontraintes et déformations syn- et post-collision Afrique Europe identifiées dans la couverture mésozoïque et cénozoïque du Haut Atlas occidental (Maroc)Syn- and post-collision Africa Europe palaeostresses and deformations identified in the West High-Atlas Mesozoic and Cenozoic cover (Morocco)

    Science.gov (United States)

    Amrhar, Mostafa

    Palaeostresses and deformation axis reconstruction related to the intracontinental High-Atlas uplift evidences two shortening phases from Upper Cretaceous to Quaternary. The first compression is oriented N20-30°E and is Maastrichtian to Oligocene age; the second one, oriented N120-160°E, is syn-Mio-Pliocene. Tectonic inversion of the lateral to compressive Jurassic regime is contemporaneous with the beginning of Africa and Europe collision. Rotation of the Mio-Pliocene shortening orientation could be linked to the change of the convergence direction between the Africa and Europe plates. To cite this article: M. Amrhar, C. R. Geoscience 334 (2002) 279-285.

  7. Extraction of metals such as Pu, U and Sr with an organic solvent or a solid phase containing a cis-syn-cis isomer of the crown ether DCH18C6

    International Nuclear Information System (INIS)

    Guy, A.; Foos, J.; Lemaire, M.; Guyon, V.; Chomel, R.; Doutreluigne, P.; Le Roy, H.

    1991-01-01

    The cis-syn-cis isomer of the crown ether DCH18C6 is used in solution in an organic diluent such as benzonitrile or dichlorethane, or on a solid phase such as silica. The use of this isomer increases the extraction ratio of plutonium and strontium of solution from spent fuel reprocessing or from aqueous effluents containing Sr or Pu [fr

  8. Hybrid macrocycle formation and spiro annulation on cis-syn-cis-tricyclo[6.3.0.02,6]undeca-3,11-dione and its congeners via ring-closing metathesis

    Directory of Open Access Journals (Sweden)

    Sambasivarao Kotha

    2015-07-01

    Full Text Available We have developed a simple methodology to transform cis-syn-cis-triquinane derivative 2 into the diindole based macrocycle 6 involving Fischer indolization and ring-closing metathesis (RCM. Various spiro-polyquinane derivatives have been assembled via RCM as a key step.

  9. Study of the comparative dynamics of the incorporation of tissue free-water tritium (TFWT) in bulrushes (Typha latifolia) and carp (Cyprinus carpio) in the Almaraz nuclear power plant cooling reservoir

    Energy Technology Data Exchange (ETDEWEB)

    Baeza, A. [Department of Applied Physics, Faculty of Veterinary, University of Extremadura, Avda de la Universidad s/n, 10071 Caceres (Spain)], E-mail: ymiralle@unex.es; Garcia, E. [Department of Applied Physics, Technical Forest Engineering School, University of Extremadura, 10600 (Plasencia) Caceres (Spain); Paniagua, J.M. [Department of Applied Physics, Polytechnic School, University of Extremadura, Avda de la Universidad s/n, 10071 Caceres (Spain); Rodriguez, A. [Department of Applied Physics, Faculty of Veterinary, University of Extremadura, Avda de la Universidad s/n, 10071 Caceres (Spain)

    2009-03-15

    The Almaraz nuclear power plant (Spain) uses the water of Arrocampo reservoir for cooling, and consequently raises the radioactive levels of the aquatic ecosystem of this reservoir. From July 2002 to June 2005, monthly samples of surface water, bulrushes (Typha latifolia) and carp (Cyprinus carpio) were collected from this reservoir. They were analyzed to determine the temporal evolution of the levels of {sup 3}H in surface water and of its transfer from the surface water to free-water in the tissues (TFWT) of the aforementioned two organisms. The tritium levels in the surface water oscillate with a biannual period, with their values in the study period ranging between 53 and 433 Bq/L. The incorporation of tritium to bulrushes and carp was fairly similar, the respective mean concentration factors being 0.74 and 0.8 (unitless, as Bq/L tissue water per Bq/L reservoir water). The temporal evolution of the levels fairly closely followed that observed for the surface water tritium, although detailed analysis showed the dominant periodicity for the bulrushes to be annual. This difference reflects the influence on the incorporation of tritium to bulrushes of diverse environmental and metabolic factors, especially evapotranspiration and the seasonal growth of this plant.

  10. Study of the comparative dynamics of the incorporation of tissue free-water tritium (TFWT) in bulrushes (Typha latifolia) and carp (Cyprinus carpio) in the Almaraz nuclear power plant cooling reservoir

    International Nuclear Information System (INIS)

    Baeza, A.; Garcia, E.; Paniagua, J.M.; Rodriguez, A.

    2009-01-01

    The Almaraz nuclear power plant (Spain) uses the water of Arrocampo reservoir for cooling, and consequently raises the radioactive levels of the aquatic ecosystem of this reservoir. From July 2002 to June 2005, monthly samples of surface water, bulrushes (Typha latifolia) and carp (Cyprinus carpio) were collected from this reservoir. They were analyzed to determine the temporal evolution of the levels of 3 H in surface water and of its transfer from the surface water to free-water in the tissues (TFWT) of the aforementioned two organisms. The tritium levels in the surface water oscillate with a biannual period, with their values in the study period ranging between 53 and 433 Bq/L. The incorporation of tritium to bulrushes and carp was fairly similar, the respective mean concentration factors being 0.74 and 0.8 (unitless, as Bq/L tissue water per Bq/L reservoir water). The temporal evolution of the levels fairly closely followed that observed for the surface water tritium, although detailed analysis showed the dominant periodicity for the bulrushes to be annual. This difference reflects the influence on the incorporation of tritium to bulrushes of diverse environmental and metabolic factors, especially evapotranspiration and the seasonal growth of this plant

  11. Syn-anti conformational switching in an ethane-bridged Co(II)bisporphyrin induced by external stimuli: effects of inter-macrocyclic interactions, axial ligation and chemical and electrochemical oxidations.

    Science.gov (United States)

    Dey, Soumyajit; Rath, Sankar Prasad

    2014-02-07

    The syn-anti conformational switching has been demonstrated in the ethane-bridged dicobalt(II)bisporphyrin which is present in the syn-form only. The addition of either perylene or axial ligands to Co(II)(bisporphyrin) completely transforms the syn form into the anti because of strong π-π interaction and axial coordination, respectively. The complex undergoes four 1e-oxidations in CH2Cl2 which are indicative of strong through space interactions between the two cofacial Co-porphyrins at 295 K. The first oxidation is a metal centered one and occurs at a potential much lower than that of the monomeric analog. However, the second oxidation, which is again metal centered, was at a significantly higher potential. The large difference between the first two oxidations, as observed here, is due to much stronger inter-porphyrin interactions. The step-wise oxidations have been performed both chemically and electro-chemically while the progress of the reactions was monitored by UV-visible and (1)H NMR spectroscopy. After 1e-oxidation, a very broad (1)H NMR signal results with increased difference between two meso resonances, which indicates that the two macrocycles are in the syn-form with lesser interplanar separation as also observed by DFT. However, 2e-oxidation results in the stabilization of the anti form. The addition of axial ligands to Co(II)(bisporphyrin) also completely transforms the syn form into the anti form. While additions of THF and I2/I(-) both result in the formation of five-coordinate complexes, Co(II) is oxidized to Co(III) in the case of the latter. However, additions of 1-methylimidazole, pyridine and pyrazine as axial ligands result in the formation of a six-coordinate complex in which Co(II) is spontaneously oxidized to Co(III) in air.

  12. Dips, ramps, and rolls- Evidence for paleotopographic and syn-depositional fault control on the Western Kentucky No. 4 coal bed, tradewater formation (Bolsovian) Illinois Basin

    Science.gov (United States)

    Greb, S.F.; Eble, C.F.; Williams, D.A.; Nelson, W.J.

    2001-01-01

    The Western Kentucky No. 4 coal is a high-volatile B to high-volatile C bituminous coal that has been heavily mined along the southern margin of the Western Kentucky Coal Field. The seam has a reputation for rolling floor elevation. Elongate trends of floor depressions are referred to as "dips" and "rolls" by miners. Some are relatively narrow and straight to slightly curvilinear in plan view, with generally symmetric to slightly asymmetric cross-sections. Others are broader and asymmetric in section, with sharp dips on one limb and gradual, ramp-like dips on the other. Some limbs change laterally from gradual dip, to sharp dip, to offset of the coal. Lateral changes in the rate of floor elevation dip are often associated with changes in coal thickness, and in underground mines, changes in floor elevation are sometimes associated with roof falls and haulage problems. In order to test if coal thickness changes within floor depressions were associated with changes in palynology, petrography and coal quality, the coal was sampled at a surface mine across a broad. ramp-like depression that showed down-dip coal thickening. Increment samples of coal from a thick (150 cm), down-ramp and thinner (127 cm), up-ramp position at one surface mine correlate well between sample sites (a distance of 60 m) except for a single increment. The anomalous increment (31 cm) in the lower-middle part of the thick coal bed contained 20% more Lycospora orbicula spores. The rolling floor elevations noted in the study mines are inferred to have been formed as a result of pre-peat paleotopographic depressions, syn-depositional faulting, fault-controlled pre-peat paleotopography, and from compaction beneath post-depositional channels and slumps. Although the association of thick coal with linear trends and inferred faults has been used in other basins to infer syn-depositional faulting, changes in palynology within increment samples of the seam along a structural ramp in this study provide

  13. The NASA POWER SSE: Deriving the Direct Normal Counterpart from the CERES SYN1deg Hourly Global Horizontal Irradiance during Early 2000 to Near Present

    Science.gov (United States)

    Zhang, T.; Stackhouse, P. W., Jr.; Westberg, D. J.

    2017-12-01

    The NASA Prediction of Worldwide Energy Resource (POWER) Surface meteorology and Solar Energy (SSE) provides solar direct normal irradiance (DNI) data as well as a variety of other solar parameters. The currently available DNIs are monthly means on a quasi-equal-area grid system with grid boxes roughly equivalent to 1 degree longitude by 1 degree latitude around the equator from July 1983 to June 2005, and the data were derived from the GEWEX Surface Radiation Budget (SRB) monthly mean global horizontal irradiance (GHI, Release 3) and regression analysis of the Baseline Surface Radiation Network (BSRN) data. To improve the quality of the DNI data and push the temporal coverage of the data to near present, we have applied a modified version of the DIRINDEX global-to-beam model to the GEWEX SRB (Release 3) all-sky and clear-sky 3-hourly GHI data and derived their DNI counterparts for the period from July 1983 to December 2007. The results have been validated against the BSRN data. To further expand the data in time to near present, we are now applying the DIRINDEX model to the Clouds and the Earth's Radiant Energy System (CERES) data. The CERES SYN1deg (Edition 4A) offers hourly all-sky and clear-sky GHIs on a 1 degree longitude by 1 degree latitude grid system from March 2000 to October 2016 as of this writing. Comparisons of the GHIs with their BSRN counterparts show remarkable agreements. Besides the GHIs, the inputs will also include the atmospheric water vapor and surface pressure from the Modern Era Retrospective-Analysis for Research and Applications (MERRA) and the aerosol optical depth from the Max-Planck Institute Climatology (MAC-v1). Based on the performance of the DIRINDEX model with the GEWEX SRB GHI data, we expect at least equally good or even better results. In this paper, we will show the derived hourly, daily, and monthly mean DNIs from the CERES SYN1deg hourly GHIs from March 2000 to October 2016 and how they compare with the BSRN data.

  14. Syn-collisional I-type Esenköy Pluton (Eastern Anatolia-Turkey): An indication for collision between Arabian and Eurasian plates

    Science.gov (United States)

    Açlan, Mustafa; Altun, Yusuf

    2018-06-01

    The Esenköy pluton which is situated in the East Anatolian Accretionary Complex (EACC) is represented by I-type, metalumino, calc-alkaline, VAG + syn-COLG, gabbro, diorite, quartz diorite, tonalite and granodiorite type rocks. This paper presents the characteristics of the above granitoids on their major, trace, rare earth elements (REE) and their zircon U-Pb dating. Zircon U-Pb crystallisation ages for gabbro, tonalite and granodiorite are 22.3 ± 0.2 Ma, 21.7 ± 0.2 Ma and 21.8 ± 0.2 Ma respectively. Esenköy granitoids show medium and high-K calc-alkaline character, with six exceptional K-poor sample plot in tholeiitic series field. The Rb/Y-Nb/Y diagram for Esenköy granitoids display subduction zone enrichment trend. The data which obtained from major, trace and REE geochemical characteristics and 206Pb/238U ages indicate that the collision which is take place between Arabian and Eurasian plates along the Bitlis-Zagros suture zone has begun in the Early Miocene (Aquitanian) or before from Early Miocene.

  15. Solvolysis of deuterium-labeled β-(syn-7-norbornenyl)ethyl p-bromobenzenesulfonates. Multiple cation automerizations in tight ion pairs

    International Nuclear Information System (INIS)

    Bly, R.S.; Bly, R.K.; Hamilton, J.B.; Jindal, S.P.

    1977-01-01

    The brosylates of α,α- 2 H 2 -, β,β- 2 H 2 -, and α,α,β,β- 2 H 4 -β-(syn-7-norbornenyl)ethanol have been prepared and solvolyzed at 25 0 C in buffered acetic acid, in buffered formic acid, and in buffered 90 percent acetone-water. The deuterated exo-2-brendyl and exo-4-brexyl derivatives produced in each case after a single hydrogen or deuterium shift have been converted to deuterated brendan-2-one and brexan-4-one mixtures and the position of the deuterium labels in each ketone determined mass spectrometrically. Comparison of the deuterium content of the brexan-4-one both before and after base-catalyzed exchange with protium permits analysis of the fractions of solvolysis product derived from each recognizably discrete rearranged cation. From these results it is clear that some hydrogen or deuterium migration occurs from each methylenic carbon of the starting brosylate and that 10 to 19 percent of those migrations are preceded by at least one Wagner--Meerwein automerization. It is suggested that the observed effect of the different solvents on the product distribution is due in part to ion pairing which affects the rate of transformations that change the net charge separation in the initial intermediate

  16. Episodic normal faulting and magmatism during the syn-spreading stage of the Baiyun sag in Pearl River Mouth Basin: response to the multi-phase seafloor spreading of the South China Sea

    Science.gov (United States)

    Deng, Peng; Mei, Lianfu; Liu, Jun; Zheng, Jinyun; Liu, Minghui; Cheng, Zijie; Guo, Fengtai

    2018-03-01

    Considerable post-breakup extensional deformation is recorded in the continental margins of the South China Sea (SCS). To recognize the nature and origin of the significant deformation during the syn-spreading stage (32-15.5 Ma) in the SCS, we comprehensively analyzed the geometry and kinematics of the faults and contemporaneous magmas in the Baiyun sag, northern margin of the SCS, using high-resolution regional three-dimensional seismic data. The kinematic analyses indicate that the faults in the Baiyun sag are recently formed following the onset of seafloor spreading in the SCS. The faults exhibit multiple episodes of growth history, with three active episodes, 32-29, 23.8-21 and 18.5-16.5 Ma, separated by periods of inactivity. Four volcanic groups comprising 98 volcanic mounds have been identified and described, located separately in the northwestern, the central, the southeastern and the northern slope areas. The occurrence of multiple palaeo-seafloors, complemented by the biostratigraphic and K-Ar dating data, reveals multiple extrusive events of the syn-spreading magmas in the Baiyun sag, with three active periods of 23.8-21, 18.5-17.5 and 17.5-16.5 Ma. This study confirms that the normal faulting has a shared genetic origin with the contemporaneous magmatism during the syn-spreading stage in the deep-offshore Baiyun sag, northern margin of the SCS. The episodic fault growth and magmatic extrusive events reveal that the Baiyun sag has undergone at least three episodic tectonic events during the syn-spreading stage, which evolved in response to the multi-stage seafloor spreading of the SCS.

  17. Nature, geochemistry and petrogenesis of the syn-tectonic Amspoort suite (Pan-African Boundary Igneous Complex, Kaoko Belt, NW Namibia)

    Science.gov (United States)

    Janousek, Vojtech; Konopasek, Jiri; Ulrich, Stanislav

    2010-05-01

    Crucial information on the Neoproterozoic-Cambrian amalgamation of Western Gondwana is provided by studies of the large Pan-African collisional belt in central-northern Namibia. This so-called Damara Orogen (Miller, 1983) can be subdivided into two branches, the SW-NE trending Damara Belt and a roughly perpendicular, NNW-SSE trending Kaoko Belt further north. The Kaoko Belt consists of two principal crustal units. The easterly part has a Congo Craton affinity (a basement built mostly by ≥ 1.5 Ga granitic gneisses with Neoproterozoic metasedimentary cover), whereas the westerly Coastal Terrane consists of Neoproterozoic (c.850-650 Ma) metapsammites and minor metabasic bodies; no exposures of the basement were found. The at least 180 km long, NNW-SSE trending suture between both units was intruded by numerous syn-tectonic magmatic bodies with ages spanning the interval 580-550 Ma (Seth et al., 1998; Kröner et al., 2004) designated as the Boundary Igneous Complex by Konopásek et al. (2008). The most typical representatives of this syn-collision igneous association are c.550 Ma old K-feldspar-phyric, Bt ± Cam granites-granodiorites of the Amspoort suite, with minor Cpx gabbro and rare two-pyroxene dolerite bodies. The petrological character, whole-rock geochemistry and Sr-Nd isotopic signatures of the scarce Opx-Cpx-Bt dolerites indicate an origin from a CHUR-like mantle-derived melts (87Sr/86Sr550 ~ 0.7045, ɛNd550 ~ 0) modified by extensive (?Ol-) Cpx fractionation. The rest of the suite is interpreted as a product of a high-temperature anatexis of a heterogeneous lower crust, built mainly by immature metapsammites - rich in arc-derived detritus - with minor metabasite and intermediate metaigneous bodies. The most likely source appears to be the anatectic Coastal Terrane gneisses. Yet, partial melting of the so far little constrained Congo Craton cover, if formed by immature and youthful detritus unrelated to the basement, cannot be discounted. In any case, the

  18. Analog modeling and kinematic restoration of inverted hangingwall synclinal basins developed above syn-kinematic salt: Application to the Lusitanian and Parentis basins

    Science.gov (United States)

    Roma, Maria; Vidal-Royo, Oskar; McClay, Ken; Ferrer, Oriol; Muñoz, Josep Anton

    2017-04-01

    The formation of hagingwall syncline basins is basically constrained by the geometry of the basement-involved fault, but also by salt distribution . The formation of such basins is common around the Iberian Peninsula (e.g. Lusitanian, Parentis, Basque-Cantabian, Cameros and Organyà basins) where Upper Triassic (Keuper) salt governed their polyphasic Mesozoic extension and their subsequent Alpine inversion. In this scenario, a precise interpretation of the sub-salt faults geometry and a reconstruction of the initial salt thickness are key to understand the kinematic evolution of such basins. Using an experimental approach (sandbox models) and these Mesozoic basins as natural analogues, the aim of this work is to: 1) investigate the main parameters that controlled the formation and evolution of hagingwall syncline basins analyzing the role of syn-kinematic salt during extension and subsequent inversion; and 2) quantify the deformation and salt mobilization based on restoration of analog model cross sections. The experimental results demonstrate that premature welds are developed by salt deflation with consequent upward propagation of the basal fault in salt-bearing rift systems with a large amount of extension,. In contrast, thicker salt inhibits the upward fault propagation, which results into a further salt migration and development of a hagingwall syncline basins flanked by salt walls. The inherited extensional architecture as well as salt continuity dramatically controlled subsequent inversion. Shortening initially produced the folding and the uplift of the synclinal basins. Minor reverse faults form as a consequence of overtightening of welded diapir stems. However, no trace of reverse faulting is found around diapirs stems, as ductile unit is still available for extrusion, squeezing and accommodation of shortening. Restoration of the sandbox models has demonstrated that this is a powerful tool to unravel the complex structures in the models and this may

  19. High-grade iron ore at Windarling, Yilgarn Craton: a product of syn-orogenic deformation, hypogene hydrothermal alteration and supergene modification in an Archean BIF-basalt lithostratigraphy

    Science.gov (United States)

    Angerer, Thomas; Hagemann, Steffen G.; Danyushevsky, Leonid

    2013-08-01

    Banded iron formation (BIF)-hosted iron ore deposits in the Windarling Range are located in the lower greenstone succession of the Marda-Diemals greenstone belt, Southern Cross domain, Yilgarn Craton and constitute a total hematite-martite-goethite ore resource of minimum 52 Mt at 60 wt.% Fe (0.07 P). Banded iron formation is interlayered with high-Mg basalts at Windarling and precipitated during episodes of volcanic quiescence. Trace element content and the rare earth element (REE) ratios Y/Ho (42 to 45), Sm/Yb (1.5), together with positive La and Gd anomalies in `least-altered' hematite-magnetite-metachert-BIF indicate the precipitation from Archean seawater that was fertilised by hydrothermal vent fluids with a basaltic HREE-Y signature. Hypogene iron ore in sub-greenschist facies metamorphosed BIF formed during three distinct stages: ore stage 1 was a syn- to post-metamorphic, syn-D1, Fe-Ca-Mg-Ni-Co-P-REE metasomatism that produced local Ni-REE-rich Fe-dolomite-magnetite alteration in BIF. Hydrothermal alteration was induced by hot fluid flow controlled by brittle-ductile reactivation of BIF-basalt margins and crosscutting D1 faults. The Ni-Co-rich content of dolomite and a shift in REE ratios in carbonate-altered BIF towards Archean mafic rock signature (Y/Ho to 31 to 40, Sm/Yb to 1 to 2 and Gd/Gd* to 1.2 to 1.4) suggest that high-Mg basalts in the Windarling Range were the primary source of introduced metals. During ore stage 2, a syn-deformational and likely acidic and oxidised fluid flow along BIF-basalt margins and within D1 faults leached carbonate and precipitated lepidoblastic and anhedral/granoblastic hematite. High-grade magnetite-hematite ore is formed during this stage. Ore stage 3 hydrothermal specular hematite (spcH)-Fe-dolomite-quartz alteration was controlled by a late-orogenic, brittle, compressional/transpressional stage (D4; the regional-scale shear-zone-related D3 is not preserved in Windarling). This minor event remobilised iron oxides

  20. Syn på sensation

    DEFF Research Database (Denmark)

    Svendsen, Jesper Tinggaard

    2010-01-01

      Underlødig, uvederhæftig, fræk, underholdende. Sensationspressen i Danmark har over 100 år på bagen og er i form af Ekstra Bladet og BT i dag en velkendt og relativt genrestabil størrelse, som de fleste har en holdning til. Dette gælder også vores uddannelsesinstitutioner. Betragter vi fx, hvor...

  1. Syn-eruptive, soft-sediment deformation of deposits from dilute pyroclastic density current: triggers from granular shear, dynamic pore pressure, ballistic impacts and shock waves

    Science.gov (United States)

    Douillet, G. A.; Taisne, B.; Tsang-Hin-Sun, E.; Muller, S. K.; Kueppers, U.; Dingwell, D. B.

    2015-05-01

    Soft-sediment deformation structures can provide valuable information about the conditions of parent flows, the sediment state and the surrounding environment. Here, examples of soft-sediment deformation in deposits of dilute pyroclastic density currents are documented and possible syn-eruptive triggers suggested. Outcrops from six different volcanoes have been compiled in order to provide a broad perspective on the variety of structures: Soufriere Hills (Montserrat), Tungurahua (Ecuador), Ubehebe craters (USA), Laacher See (Germany), and Tower Hill and Purrumbete lakes (both Australia). The variety of features can be classified in four groups: (1) tubular features such as pipes; (2) isolated, laterally oriented deformation such as overturned or oversteepened laminations and vortex-shaped laminae; (3) folds-and-faults structures involving thick (>30 cm) units; (4) dominantly vertical inter-penetration of two layers such as potatoids, dishes, or diapiric flame-like structures. The occurrence of degassing pipes together with basal intrusions suggest fluidization during flow stages, and can facilitate the development of other soft-sediment deformation structures. Variations from injection dikes to suction-driven, local uplifts at the base of outcrops indicate the role of dynamic pore pressure. Isolated, centimeter-scale, overturned beds with vortex forms have been interpreted to be the signature of shear instabilities occurring at the boundary of two granular media. They may represent the frozen record of granular, pseudo Kelvin-Helmholtz instabilities. Their recognition can be a diagnostic for flows with a granular basal boundary layer. Vertical inter-penetration and those folds-and-faults features related to slumps are driven by their excess weight and occur after deposition but penecontemporaneous to the eruption. The passage of shock waves emanating from the vent may also produce trains of isolated, fine-grained overturned beds that disturb the surface bedding

  2. Satellite DNA and Transposable Elements in Seabuckthorn (Hippophae rhamnoides), a Dioecious Plant with Small Y and Large X Chromosomes

    Czech Academy of Sciences Publication Activity Database

    Puterova, Janka; Razumova, O.; Martínek, T.; Alexandrov, O.; Divashuk, M.; Kubát, Zdeněk; Hobza, Roman; Karlov, G.; Kejnovský, Eduard

    2017-01-01

    Roč. 9, č. 1 (2017), s. 197-212 ISSN 1759-6653 R&D Projects: GA ČR GBP501/12/G090 Grant - others:GA MŠk(CZ) LM2010005 Institutional support: RVO:68081707 Keywords : sex-chromosomes * repetitive sequences * silene-latifolia Subject RIV: EB - Genetics ; Molecular Biology OBOR OECD: Developmental biology Impact factor: 3.979, year: 2016

  3. Satellite DNA and Transposable Elements in Seabuckthorn (Hippophae rhamnoides), a Dioecious Plant with Small Y and Large X Chromosomes

    Czech Academy of Sciences Publication Activity Database

    Puterová, J.; Razumova, O.; Martínek, T.; Alexandrov, O.; Divashuk, M.; Kubát, Z.; Hobza, Roman; Karlov, G.; Kejnovský, E.

    2017-01-01

    Roč. 9, č. 1 (2017), s. 197-212 ISSN 1759-6653 R&D Projects: GA ČR GBP501/12/G090 Institutional support: RVO:61389030 Keywords : sex-chromosomes * repetitive sequences * silene-latifolia * molecular cytogenetics * arabidopsis-thaliana * genome size * evolution * organization * alignment * database * sex chromosomes * genome composition * chromosomal localization * repetitive DNA Subject RIV: EB - Genetics ; Molecular Biology OBOR OECD: Plant sciences, botany Impact factor: 3.979, year: 2016

  4. Impact of Repetitive Elements on the Y Chromosome Formation in Plants

    Czech Academy of Sciences Publication Activity Database

    Hobza, Roman; Čegan, Radim; Jesionek, Wojciech; Kejnovský, Eduard; Vyskot, Boris; Kubát, Zdeněk

    2017-01-01

    Roč. 8, č. 11 (2017), č. článku 302. ISSN 2073-4425 R&D Projects: GA ČR GA16-08698S; GA ČR GJ15-21523Y Institutional support: RVO:68081707 Keywords : papaya sex-chromosomes * male-specific region * transposable elements * silene-latifolia Subject RIV: EB - Genetics ; Molecular Biology OBOR OECD: Developmental biology Impact factor: 3.600, year: 2016

  5. The antibacterial potentials of Nauclea latifolia

    African Journals Online (AJOL)

    STORAGESEVER

    2008-05-16

    May 16, 2008 ... Ibom and Cross River State of Nigeria and also in most parts of the ... laboratory Technology, Vom and the Bacterial research Laboratory,. National ... With the aid of a sterile wire loop, colonies of fresh cultures of the different ..... sanguinolenta Extract. Proc. Int. syp. On East – West Med. Seoul, korea: ...

  6. The antibacterial potentials of Nauclea latifolia

    African Journals Online (AJOL)

    STORAGESEVER

    2008-05-16

    May 16, 2008 ... traditional Chinese medicine, Indian ayurveda and Arabic unani medicine, and to various forms of indigenous medicine (WHO, 1978). Historically, plant has provided a good source of anti-infective agents; emetine, quinine and berberine remain highly effective instruments in the fight against microbial ...

  7. Secondary metabolites from Scorzonera latifolia roots

    Czech Academy of Sciences Publication Activity Database

    Acikara, O. B.; Šmejkal, K.; Cvačka, Josef; Buděšínský, Miloš; Dračínský, Martin; Saltan, G.

    2015-01-01

    Roč. 81, č. 16 (2015), PM167 ISSN 0032-0943. [GA 2015. International Congress and Annual Meeting of the Society for Medicinal Plant and Natural Product Research /63./. 23.08.2015-27.08.2015, Budapest] Institutional support: RVO:61388963 Keywords : medical plant * metabolites * Asteraceae Subject RIV: CB - Analytical Chemistry, Separation

  8. U-Th-PbT Monazite Gechronology in the South Carpathian Basement: Variscan Syn-Metamorphic Tectonic Stacking and Long-Lasting Post-Peak Decompressional Overprints

    Science.gov (United States)

    Săbău, G.; Negulescu, E.

    2012-12-01

    -tuned by comparison with the general probability function calculated from all individual age and error values. Monazite chemical compositions and variations, in connection with the textural and zonal setting of the analyzed spots, were used to estimate the geological relevance of the derived age clusters, along with inter-sample comparisons anchored on granitoid samples displaying well-expressed age plateaus, conspicuously related to consolidation and emplacement ages. The resultant ages are consistent with sandwiching of juvenile Variscan metamorphic units and slivers of reworked older basement fragments in structurally coherent sequences, formed by syn/late-metamorphic tectonic stacking. Differential exhumation and ensuing areal or local lower pressure overprinting initiated in early Permian lasted up until the Late Jurassic. The age distribution of the pervasive metamorphic overprints, in consistency with the variation of the metamorphic conditions recorded, requires a partial revision and an iterative adjustment between determined ages and metamorphic features, and the lithostratigraphic separations operated in several basement units of the South Carpathians. Acknowledgements Grant PN-II-ID-PCE-2011-3-0030 by the Romanian Executive Unit for Financing Higher Education, Research, Development and Innovation (UEFISCDI)

  9. Kinematics of syn- and post-exhumational shear zones at Lago di Cignana (Western Alps, Italy): constraints on the exhumation of Zermatt-Saas (ultra)high-pressure rocks and deformation along the Combin Fault and Dent Blanche Basal Thrust

    Science.gov (United States)

    Kirst, Frederik; Leiss, Bernd

    2017-01-01

    Kinematic analyses of shear zones at Lago di Cignana in the Italian Western Alps were used to constrain the structural evolution of units from the Piemont-Ligurian oceanic realm (Zermatt-Saas and Combin zones) and the Adriatic continental margin (Dent Blanche nappe) during Palaeogene syn- and post-exhumational deformation. Exhumation of Zermatt-Saas (U)HP rocks to approximately lower crustal levels at ca. 39 Ma occurred during normal-sense top-(S)E shearing under epidote-amphibolite-facies conditions. Juxtaposition with the overlying Combin zone along the Combin Fault at mid-crustal levels occurred during greenschist-facies normal-sense top-SE shearing at ca. 38 Ma. The scarcity of top-SE kinematic indicators in the hanging wall of the Combin Fault probably resulted from strain localization along the uppermost Zermatt-Saas zone and obliteration by subsequent deformation. A phase of dominant pure shear deformation around 35 Ma affected units in the direct footwall and hanging wall of the Combin Fault. It is interpreted to reflect NW-SE crustal elongation during updoming of the nappe stack as a result of underthrusting of European continental margin units and the onset of continental collision. This phase was partly accompanied and followed by ductile bulk top-NW shearing, especially at higher structural levels, which transitioned into semi-ductile to brittle normal-sense top-NW deformation due to Vanzone phase folding from ca. 32 Ma onwards. Our structural observations suggest that syn-exhumational deformation is partly preserved within units and shear zones exposed at Lago di Cignana but also that the Combin Fault and Dent Blanche Basal Thrust experienced significant post-exhumational deformation reworking and overprinting earlier structures.

  10. Typha latifolia L. Türünün Farklı Kısımlarındaki Ağır Metal ve Makro Element Miktarlarının Karşılaştırılması

    Directory of Open Access Journals (Sweden)

    Fatih KARAHASAN

    2015-09-01

    Full Text Available In this study, we determined the accumulation of heavy metals (Cu, Zn, Fe, Cd, Pb, Mn and the concentrations of macroelements (N, P, K, Ca, Mg, Na in root, steam, rhizome and leaf parts in Typha latifolia L. disturbed in Melet, Turnasuyu and Akçaova aquatic ecosystems in Ordu province. According to the analyzes, the amounts of heavy metal and macro elements of plant parts are N>P> K>N>Ca>Mg>Zn>Fe>Mn>Pb>Cd>Cu for the steam, N>P>K>Ca>Mg>Fe>Na>Mn> Zn>Pb>Cd>Cu for the root, N>P>K>Ca>Mg>Na>Mn>Zn>Fe>Pb>Cd>Cu for the leaves and N>P>K>Ca>Mg>Na>Fe>Zn>Mn>Pb>Cd>Cu for the rhizome. Our data is evaluated by using three-ways analysis of variance. According to variance analyses, we found significant statistical differences among overall average of factor levels for the elements Iron (Fe, Phosphorus (P and Magnesium (Mg (p<0.05 and/or p<0.01. While a triple interactions are found significant for Zinc (Zn and Nitrogen (N elements, various binary interactions are found for Copper (Cu, Cadmium (Cd, Lead (Pb, Manganese (Mn, Potassium (K, Calcium (Ca and Sodium (Na elements (p<0.05 and/or p<0.01

  11. VALOR NUTRICIO Y CONTENIDO DE SAPONINAS EN GERMINADOS DE HUAUZONTLE (Chenopodium nuttalliae Saff., CALABACITA (Cucurbita pepo L., CANOLA (Brassica napus L. Y AMARANTO (Amaranthus leucocarpus S. Watson syn. hypochondriacus L.

    Directory of Open Access Journals (Sweden)

    M. R. Barrón-Yánez

    2009-01-01

    (Brassica napus L. y amaranto (Amaranthus leucocarpus S. Watson syn. hypochondriacus L.. Se realizó un análisis proximal y la cuantificación de saponinas en semillas y germinados de las cuatro especies. El contenido de proteína fue más alto en los germinados de canola que en las semillas, pero en huauzontle, calabacita y amaranto no varió. El contenido de lípidos en las semillas de canola, huauzontle y amaranto disminuyó en sus germinados, pero se incrementó en calabacita. El contenido de saponinas en los germinados fue de 2,873.23 en huauzontle, 155.40 en calabacita, 429.81 en canola, y 491.45 mg 100·g-1 de peso seco en amaranto. El contenido de saponinas en semillas fue de 5280.57, 0.00, 35.77 y 42.84 mg 100·g-1 en peso seco, respectivamente. Los niveles del contenido de saponinas en semillas y germinados para las cuatro especies estudiadas no representan toxicidad para humanos. El valor nutricio fue mejor en el germinado de canola que en el de huauzontle, calabaza y amaranto. El sabor de los germinados de huauzontle y amaranto fue mejor que en los de canola y calabacita.

  12. Spectroscopic (IR, NMR) and conductometric characterization of lithium aluminum hydride - crown ethers complexes [Li{sup +}-C E](A I H{sub 4})- with C E=syn-isomers of DC 18-C-6 in benzene solutions; Caracterisation par spectrometrie (IR, RMN) et conductimetrie des complexes entre le tetrahydrualuminate de lithium LiAIH{sub 4} et l`ether-couronne DC 18-C-6* (isomeres cis-anti-cis et cis-syn-cis) en solution dans le benzene (*2,3,11,12-dicyclohexano-1,4,7,10,13,16-hexacyclooctadecane)

    Energy Technology Data Exchange (ETDEWEB)

    Bastide, J P; Ezzemouri, K; Carre, J; Bouamrane, A; Claudy, P [Institut National des Sciences Appliquees (INSA), 69 - Villeurbanne (France); Frange, B [Faculte des Sciences, 21 - Dijon (France)

    1996-03-01

    [Li{sup +}-C E](AIH{sub 4}){sup -} complexes with C E = syn and anti-isomers of the crown ether DC 18-C-6 have been characterized in benzene solutions by IR (infrared spectroscopy), NMR (nuclear magnetic resonance) and conductometry (at 298 K). The properties of these complexes are closely related to those of the cation [Li{sup +}-C E]. For the anti-isomer, no distortion of the macrocycle was noticed after complexation, the Li{sup +} trapped cation is coordinated with four oxygen atoms of the cavity, and the complex exhibits a covalent behavior. Electrical conductivity of the benzene solution is concentration independent and has a very low mean value ({lambda} = 0,06 {omega}{sup -1}.cm{sup 2}.mol{sup -1}). The macrocycle of the syn-isomer is drastically distorted after complexation. A tridimensional cavity is formed, in which the Li{sup +} trapped cation is coordinated with six oxygen atoms. As a consequence, the species exhibits a high degree of ionic character due to the stretching of the Li{sup +}---(AIH{sub 4}){sup -} bond. Electrical conductivity is enhanced for dilute solutions (x 10 at C 0,01 mol.L{sup -1}). The regular tetrahedral symmetry of (AIH{sub 4}){sup -} anion is retained in the molecular structure of the two complexes. Benzene solutions of [Li-+-syn-DC 18-C-6](AIH{sub 4}){sup -} appear to be the first example of free-(AIH{sub 4}){sup -} anions in a non-polar organic medium. (authors). 22 refs., 3 figs., 4 tabs.

  13. Interactions between Ethanol, syn-2,3-Hexanediol, 3-Hydroxyhexan-2-one, and 3-Hydroxyoctan-2-one Lures on Trap Catches of Hardwood Longhorn Beetles in Southeastern United States.

    Science.gov (United States)

    Miller, D R; Crowe, C M; Mayo, P D; Reid, L S; Silk, P J; Sweeney, J D

    2017-10-01

    The effectiveness of a four-component "super lure" consisting of ethanol (E) and the cerambycid pheromones syn-2,3-hexanediol (D6), racemic 3-hydroxyhexan-2-one (K6), and racemic 3-hydroxyoctan-2-one (K8) on trap catches of Cerambycidae (Coleoptera) was determined in southeast United States with seven trapping experiments in 2011-2013. We captured 74 species of longhorn beetles in our three-year study. Ethanol significantly increased the mean catches of seven species and increased the number of cerambycid species detected. Traps with the "super lure" were effective for 8 of 13 species of Cerambycidae previously shown to be attracted to binary combinations of ethanol plus one of the three pheromones. However, the "super lure" was less effective for the remaining five species with catch reductions of 40-90% compared with combinations of ethanol and one or two of the pheromones. For example, K6 + K8 lures reduced catches of Anelaphus villosus (F.) in traps with E + D6 by 90%. Similarly, catches of Anelaphus pumilus (Newman) in traps with E + K6 + D6 were reduced by 50% with the addition of K8. Catches of Knulliana cincta (Drury) in traps with K6 + K8 lures were interrupted by D6, an effect negated by the addition of ethanol. Given the interruptive effects on trap catches of some species when lures are combined in a single trap, developing optimal lure blends to maximize detection efficacy will be a challenge for managers of detection programs for non-native invasive species of longhorn beetles. Published by Oxford University Press on behalf of Entomological Society of America 2017. This work is written by (a) US Government employee(s) and is in the public domain in the US.

  14. A phase 1 study of a group B meningococcal native outer membrane vesicle vaccine made from a strain with deleted lpxL2 and synX and stable expression of opcA.

    Science.gov (United States)

    Keiser, Paul B; Gibbs, Barnett T; Coster, Trinka S; Moran, E Ellen; Stoddard, Mark B; Labrie, Joseph E; Schmiel, Deborah H; Pinto, Valerian; Chen, Ping; Zollinger, Wendell D

    2010-10-08

    This phase 1 clinical trial assessed the safety and immunogenicity of a native outer membrane vesicle (NOMV) vaccine prepared from a lpxL2(-) synX(-) mutant of strain 44/76 with opcA expression stabilized. Thirty-four volunteers were assigned to one of the three dose groups (25 mcg, 25 mcg with aluminum hydroxide adjuvant, and 50 mcg) to receive three intramuscular injections at 0, 6 and 24 weeks. Specific local and systemic adverse events (AEs) were solicited by diary and at visits on days 1, 2, 7 and 14 after each vaccination and at the end of the study at 30 weeks. Blood chemistries, complete blood count, and coagulation studies were measured on each vaccination day and again two days later. Blood for antibody measurements and bactericidal assays were drawn 0, 14, and 42 days after each vaccination. The proportion of volunteers who developed a fourfold or greater increase in serum bactericidal activity (SBA) to the wild-type parent of the vaccine strain with high opcA expression at 6 weeks after the third dose was 12/26 (0.46, 95% confidence interval 0.27-0.65). Antibody levels to OpcA were significantly higher in vaccine responders than in non-responders (p=0.008), and there was a trend for higher antibody levels to the lipooligosaccharide (LOS) (p=0.059). Bactericidal depletion assays on sera from volunteers with high-titer responses also indicate a major contribution of anti-OpcA and anti-LOS antibodies to the bactericidal response.These results suggest that genetically modified NOMV vaccines can induce protection against group B meningococcus. Copyright © 2010 Elsevier Ltd. All rights reserved.

  15. Rapport om DanDiaSyn-projektet

    DEFF Research Database (Denmark)

    Jørgensen, Henrik; Hagedorn, Karen

    2009-01-01

    Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9......Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9...

  16. Gymnasieelevers syn på influencers

    OpenAIRE

    Storbacka, Carl-Anton Storbacka; Jahn, Aron

    2017-01-01

    Influencer marketing has arguably emerged as one of the most effective forms of marketing, and it’s here to stay. That has made influencer marketing just as compelling of a research subject as it is useful for marketing professionals. This thesis aims to put an answer to how high school students experience influencer marketing across social media and how they feel it affect their buying intentions. The data that this study relies on is extracted from an opinion poll, the results of that surve...

  17. Inter-populations genetic and morphological diversity in three Silene ...

    African Journals Online (AJOL)

    enoho

    2012-03-30

    Mar 30, 2012 ... 2Biology Department, School of Basic Sciences, Science and Research Branch, Islamic Azad University (SRBIAU), ... other populations in both morphological and molecular features. ... species with world-wide distribution.

  18. KIN17, XPC, DNA-PKCS and XRCC4 proteins in the cellular response to DNA damages. Relations between nucleotide excision repair and non-homologous end joining in a human syn-genic model

    International Nuclear Information System (INIS)

    Despras, Emmanuelle

    2006-01-01

    The response to genotoxic stress involves many cellular factors in a complex network of mechanisms that aim to preserve the genetic integrity of the organism. These mechanisms enclose the detection and repair of DNA lesions, the regulation of transcription and replication and, eventually, the setting of cell death. Among the nuclear proteins involved in this response, kin17 proteins are zinc-finger proteins conserved through evolution and activated by ultraviolet (UV) or ionizing radiations (IR). We showed that human kin17 protein (HSAkin17) is found in the cell under a soluble form and a form tightly anchored to nuclear structures. A fraction of HSAkin17 protein is directly associated with chromatin. HSAkin17 protein is recruited to nuclear structures 24 hours after treatment with various agents inducing DNA double-strand breaks (DSB) and/or replication forks blockage. Moreover, the reduction of total HSAkin17 protein level sensitizes RKO cells to IR. We also present evidence for the involvement of HSAkin17 protein in DNA replication. This hypothesis was further confirmed by the biochemical demonstration of its belonging to the replication complex. HSAkin17 protein could link DNA replication and DNA repair, a defect in the HSAkin17 pathway leading to an increased radiosensitivity. In a second part, we studied the interactions between two DNA repair mechanisms: nucleotide excision repair (NER) and non-homologous end joining (NHEJ). NER repairs a wide variety of lesions inducing a distortion of the DNA double helix including UV-induced pyrimidine dimers. NHEJ allows the repair of DSB by direct joining of DNA ends. We used a syn-genic model for DNA repair defects based on RNA interference developed in the laboratory. Epstein-Barr virus-derived vectors (pEBV) allow long-term expression of siRNA and specific extinction of the targeted gene. The reduction of the expression of genes involved in NER (XPA and XPC) or NHEJ (DNA-PKcs and XRCC4) leads to the expected

  19. Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY1Y2) in the Dioecious Plant Rumex acetosa

    Czech Academy of Sciences Publication Activity Database

    Šteflová, Pavlína; Tokan, Viktor; Vogel, Ivan; Lexa, M.; Macas, Jiří; Novák, Petr; Hobza, Roman; Vyskot, Boris; Kejnovský, Eduard

    2013-01-01

    Roč. 5, č. 4 (2013), s. 769-782 ISSN 1759-6653 R&D Projects: GA ČR(CZ) GAP305/10/0930; GA ČR(CZ) GAP501/10/0102; GA ČR(CZ) GAP501/12/2220 Grant - others:GA MŠk(CZ) ED1.1.00/02.0068 Program:ED Institutional research plan: CEZ:AV0Z50040702 Institutional support: RVO:68081707 ; RVO:60077344 Keywords : Y-CHROMOSOME * REPETITIVE SEQUENCES * SILENE-LATIFOLIA Subject RIV: BO - Biophysics; EB - Genetics ; Molecular Biology (BC-A) Impact factor: 4.532, year: 2013

  20. Initiation and growth of shoots of Gongronema latifolia Benth stem ...

    African Journals Online (AJOL)

    There was significant reduction in number of days to shoot initiation and growth in sawdust medium in the wet season. Sawdust and soil gave a better performance of the cuttings in opening of apical buds, initiation of shoots, percentage of rooted cuttings, number of vines, vine length and number of opposite leaves on vines ...

  1. A Comparison of Selective Pressures in Plant X-Linked and Autosomal Genes.

    Science.gov (United States)

    Krasovec, Marc; Nevado, Bruno; Filatov, Dmitry A

    2018-05-03

    Selection is expected to work differently in autosomal and X-linked genes because of their ploidy difference and the exposure of recessive X-linked mutations to haploid selection in males. However, it is not clear whether these expectations apply to recently evolved sex chromosomes, where many genes retain functional X- and Y-linked gametologs. We took advantage of the recently evolved sex chromosomes in the plant Silene latifolia and its closely related species to compare the selective pressures between hemizygous and non-hemizygous X-linked genes as well as between X-linked genes and autosomal genes. Our analysis, based on over 1000 genes, demonstrated that, similar to animals, X-linked genes in Silene evolve significantly faster than autosomal genes—the so-called faster-X effect. Contrary to expectations, faster-X divergence was detectable only for non-hemizygous X-linked genes. Our phylogeny-based analyses of selection revealed no evidence for faster adaptation in X-linked genes compared to autosomal genes. On the other hand, partial relaxation of purifying selection was apparent on the X-chromosome compared to the autosomes, consistent with a smaller genetic diversity in S. latifolia X-linked genes (π x = 0.016; π aut = 0.023). Thus, the faster-X divergence in S. latifolia appears to be a consequence of the smaller effective population size rather than of a faster adaptive evolution on the X-chromosome. We argue that this may be a general feature of “young” sex chromosomes, where the majority of X-linked genes are not hemizygous, preventing haploid selection in heterogametic sex.

  2. NMR structural studies of the ionizing radiation adduct 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) opposite deoxyadenosine in a DNA duplex. 8-oxo-7H-dG(syn)·dA(anti) alignment at lesion site

    International Nuclear Information System (INIS)

    Kouchakdjian, M.; Patel, D.J.; Bodepudi, V.; Shibutani, S.; Eisenberg, M.; Johnson, F.; Grollman, A.P.

    1991-01-01

    Proton NMR studies are reported on the complementary d(C1-C2-A3-C4-T5-A6-oxo-G7-T8-C9-A10-C11-C12)·d(G13-G14-T15-G16-A17-A18-T19-A20-G21-T22-G23-G24) dodecanucleotide duplex (designated 8-oxo-7H-dG·dA 12-mer), which contains a centrally located 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) residue, a group commonly found in DNA that has been exposed to ionizing radiation or oxidizing free radicals. From the NMR spectra it can be deduced that this moiety exists as two tautomers, or gives rise to two DNA conformations, that are in equilibrium and that exchange slowly. The present study focuses on the major component of the equilibrium that originates in the 6,8-dioxo tautomer of 8-oxo-7H-dG. The authors have assigned the exchangeable NH1, NH7, and NH 2 -2 base protons located on the Watson-Crick and Hoogsteen edges of 8-oxo-7H-dG7 in the 8-oxo-7H-dG·dA 12-mer duplex, using an analysis of one- and two-dimensional nuclear Overhauser enhancement (NOE) data in H 2 O solution. They were able to detect a set of intra- and interstrand NOEs between protons (exchangeable and nonexchangeable) on adjacent residues in the d(A6-oxo-G7-T8)·d(A17-A18-T19) trinucleotide segment centered about the lesion site that establishes stacking of the oxo-dG7(syn)·dA(anti) pair between stable Watson-Crick dA6·dT19 and dT8·A17 base pairs with minimal perturbation of the helix. The structural studies demonstrate that 8-oxo-7H-dG(syn)·dA(anti) forms a stable pair in the interior of the helix, providing a basis for the observed incorporation of dA opposite 8-oxo-7H-dG when readthrough occurs past this oxidized nucleoside base

  3. New xenophytes from La Palma (Canary Islands, Spain, with emphasis on naturalized and (potentially invasive species

    Directory of Open Access Journals (Sweden)

    R. Otto

    2016-07-01

    Full Text Available Many years of field work in La Palma (western Canary Islands yielded a number of interesting new records of non-native vascular plants. Amaranthus blitoides, A. deflexus, Aptenia cordifolia, Argemone ochroleuca, Begonia schmidtiana, Capsella rubella, Cardamine hamiltonii, Centratherum punctatum, Cerastium fontanum subsp. vulgare, Chasmanthe floribunda (widely confused with C. aethiopica and Crocosmia xcrocosmiiflora in Macaronesia, Chenopodium probstii, Commelina latifolia var. latifolia, Dichondra micrantha, Dysphania anthelmintica, Epilobium ciliatum, Erigeron sumatrensis, Erodium neuradifolium, Eucalyptus globulus, Euphorbia hypericifolia, E. maculata, Gamochaeta antillana, Geranium pyrenaicum, Hedychium coronarium, Hypochaeris radicata, Kalanchoe daigremontiana, K. delagoensis, K. xhoughtonii, Kickxia commutata subsp. graeca, K. spuria subsp. integrifolia, Lactuca viminea subsp. ramosissima, Landoltia punctata, Malvastrum coromandelianum subsp. capitatospicatum, Oenothera jamesii, Orobanche nana, Oxalis latifolia, Papaver hybridum, P. setigerum, Pilea microphylla, Podranea ricasoliana, Polygonum arenastrum, Portulaca granulatostellulata, P. nicaraguensis, P. nitida, P. papillatostellulata, Rumex crispus subsp. crispus, R. pulcher subsp. pulcher, R. xpratensis, Sechium edule, Sida spinosa var. angustifolia, Silene nocturna, Solanum abutiloides, S. alatum, S. decipiens, Sonchus tenerrimus, Spergularia marina, Stellaria pallida, Tragopogon porrifolius subsp. australis, Tribulus terrestris and Trifolium repens subsp. repens are naturalized or (potentially invasive xenophytes, reported for the first time from either the Canary Islands or from La Palma. 37 additional, presumably ephemeral taxa are reported for the first time from the Canary Islands, whereas 56 ephemeral taxa are new for La Palma..

  4. A phase 1 study of a meningococcal native outer membrane vesicle vaccine made from a group B strain with deleted lpxL1 and synX, over-expressed factor H binding protein, two PorAs and stabilized OpcA expression.

    Science.gov (United States)

    Keiser, P B; Biggs-Cicatelli, S; Moran, E E; Schmiel, D H; Pinto, V B; Burden, R E; Miller, L B; Moon, J E; Bowden, R A; Cummings, J F; Zollinger, W D

    2011-02-04

    This phase I clinical trial assessed the safety and immunogenicity of a native outer membrane vesicle (NOMV) vaccine prepared from an lpxL1(-) synX(-) mutant of strain 8570(B:4:P1.19,15:L8-5) of Neisseria meningitidis. Additional mutations enhance the expression of factor H binding protein variant 1 (fHbp v.1), stabilize expression of OpcA and introduce a second PorA (P1.22,14). Thirty-six volunteers were assigned to one of four dose groups (10, 25, 50 and 75 mcg, based on protein content) to receive three intramuscular injections at six week intervals with aluminum hydroxide adjuvant. Specific local and systemic adverse events were solicited by diary and at visits on days 2, 7, and 14 after each vaccination. Blood chemistries, complete blood count, and coagulation studies were measured on each vaccination day and again 2 and 14 days later. Blood for ELISA and serum bactericidal assays was drawn two and six weeks after each vaccination. The proportion of volunteers who developed a fourfold or greater increase in bactericidal activity to the wild type parent of the vaccine strain at two weeks after the third dose was 27 out of 34 (0.79, 95% C.I. 0.65-0.93). Against four other group B strains the response rate ranged from 41% to 82% indicating a good cross reactive antibody response. Depletion assays show contributions to bactericidal activity from antibodies to lipooligosaccharide (LOS), fHbp v.1 and OpcA. Published by Elsevier Ltd.

  5. Danske elevers oplevelser af og syn på udeskole

    DEFF Research Database (Denmark)

    Mygind, Lærke; Ejbye-Ernst, Niels; Bentsen, Peter

    2016-01-01

    Denne artikel er målrettet lærere, pædagoger og skoleledere, der arbejder eller vil i gang med at arbejde med udeskole. Artiklen byder på en indsigt i udeskole-vante elevers perspektiver på udeskole og bidrager således til henholdsvis at understøtte og underminere de forestillinger, som lærere...

  6. Genomet og syns- og høresansen

    DEFF Research Database (Denmark)

    Tranebjærg, Lisbeth; Rendtorff, Nanna Dahl; Brøndum-Nielsen, Karen

    2014-01-01

    The article briefly reviews the impact of genetics and genomics in audiology and ophthalmology, respectively. The discovery of an increasing number of genes associated with hearing and visual impairment creates a foundation for a better understanding of pathophysiology, eventually leading to novel...

  7. Genomet og syns- og høresansen

    DEFF Research Database (Denmark)

    Tranebjærg, Lisbeth; Rendtorff, Nanna Dahl; Brøndum-Nielsen, Karen

    2014-01-01

    The genome in terms of audiology and ophthalmology The article briefly reviews the impact of genetics and genomics in audiology and ophthalmology, respectively. The discovery of an increasing number of genes associated with hearing and visual impairment creates a foundation for a better understan......The genome in terms of audiology and ophthalmology The article briefly reviews the impact of genetics and genomics in audiology and ophthalmology, respectively. The discovery of an increasing number of genes associated with hearing and visual impairment creates a foundation for a better...... understanding of pathophysiology, eventually leading to novel and more individualized treatments. Furthermore, genetic evaluation and counselling can contribute to molecular diagnosis, better prognostication, and mode of inheritance. Next Generation Sequencing is a technology well suited to dissect the vast...

  8. Genomet og syns- og høresansen

    DEFF Research Database (Denmark)

    Tranebjærg, Lisbeth; Rendtorff, Nanna Dahl; Brøndum-Nielsen, Karen

    2014-01-01

    and more individualized treatments. Furthermore, genetic evaluation and counselling can contribute to molecular diagnosis, better prognostication, and mode of inheritance. Next generation sequencing is a technology well suited to dissect the vast genetic heterogeneity in these conditions....

  9. strain partitioning and dimensional preferred orientation in a syn

    African Journals Online (AJOL)

    Administrator

    matrix is a subject that has received much attention either by way of theoretical ..... (parallel to б2 direction) is prevented by the lithostatic load (ρgz- Pf). – which is quite .... Kamb, W. B. (1959) Theory of preferred crystal orientation developed by ...

  10. Species boundaries and nomenclature of Rhizopus arrhizus (syn. R. oryzae)

    NARCIS (Netherlands)

    Dolatabadi, Somayeh; de Hoog, G Sybren; Meis, Jacques F; Walther, Grit

    2014-01-01

    Rhizopus arrhizus (Mucorales, Mucoromycotina) is the prevalent opportunist worldwide among the mucoralean species causing human infections. On the other hand the species has been used since ancient times to ferment African and Asian traditional foods and condiments based on ground soybeans. As

  11. Revisortilsynets og FSR - danske revisorers syn

    DEFF Research Database (Denmark)

    Hartmann, Stig; Haraszuk, Anni

    2013-01-01

    Artiklen er baseret på interview med følgende: Christel Maria Thousing og Mette Banke-Eriksen, chefkonsulenterne i sekretariatet for Revisortilsynet samt Anders Bisgaard, medlem af FSR - danske revisorers Revisionstekniske udvalg....

  12. Lärarens syn kring elevers motivation till matematiken

    OpenAIRE

    Matti, Nuha

    2014-01-01

    This survey is a case study with the purpose to find out the teacher´s perceptions about students´ motivation to mathematics. Further this study aims for the teacher´s vision on how they consider students´ motivation in mathematics in secondary school. To collect research data I have used semi structured interviews with four secondary school teachers. The result constructs according to categories that depict the purpose of the study. These categories define students’ motivation like achieving...

  13. RT-Syn: A real-time software system generator

    Science.gov (United States)

    Setliff, Dorothy E.

    1992-01-01

    This paper presents research into providing highly reusable and maintainable components by using automatic software synthesis techniques. This proposal uses domain knowledge combined with automatic software synthesis techniques to engineer large-scale mission-critical real-time software. The hypothesis centers on a software synthesis architecture that specifically incorporates application-specific (in this case real-time) knowledge. This architecture synthesizes complex system software to meet a behavioral specification and external interaction design constraints. Some examples of these external constraints are communication protocols, precisions, timing, and space limitations. The incorporation of application-specific knowledge facilitates the generation of mathematical software metrics which are used to narrow the design space, thereby making software synthesis tractable. Success has the potential to dramatically reduce mission-critical system life-cycle costs not only by reducing development time, but more importantly facilitating maintenance, modifications, and extensions of complex mission-critical software systems, which are currently dominating life cycle costs.

  14. Cochlospermum religiosum (L.) Alston Syn. C. gossypium DC ...

    Indian Academy of Sciences (India)

    fibrous, deeply furrowed bark containing gum and lobed leaves. Flowers (in the foreground) which appear after leaffall are large, golden yellow in terminal branched inflorescences. Fruit is large, and pear-shaped. Seeds are numerous and are covered with woolly hairs. Dried leaves and flowers are used as stimulant.

  15. Cordia dichotomoa Forst. f Syn. C. obliqua Willd. (English: Sebesten ...

    Indian Academy of Sciences (India)

    ropes, cordage and paper pulp. The fruit is an astringent and is used in affections o.f urinary passages, diseases o.llllngs and spleen. The decoction of bark is used infevers. The kernels are used in treating ring-worm. The leaves are used in treating ulcers and headache. The plant is used as an antidote to snake-bite.

  16. Nutrient cycling by Acacia erioloba (syn. Acacia giraffae ) in ...

    African Journals Online (AJOL)

    arid areas of Southern Africa because of the many benefits it offers to local communities. However, little quantitative plant and soil data exist to explain its ability to enhance soil fertility under local conditions. Paired soil samples taken under and ...

  17. Wild food plants used in the villages of the Lake Vrana Nature Park (northern Dalmatia, Croatia

    Directory of Open Access Journals (Sweden)

    Łukasz Łuczaj

    2013-12-01

    Full Text Available Croatia is a country of diverse plant use traditions, which are still insufficiently documented. The aim of this study was to document local traditions of using wild food plants around Lake Vrana (northern Dalmatia, Zadar region.  We interviewed 43 inhabitants of six traditional villages north of Lake Vrana. On average 12 species were listed, which in total produced an inventory of 55 food plants and 3 fungi taxa. Wild vegetables were most widely collected, particularly by older women who gathered the plants mainly when herding their flocks of sheep. Wild fruits and mushrooms were rarely collected. The former used to be an important supplementary food for children, or for everyone during times of food shortage, and the latter were relatively rare due to the dry climate and shortage of woods. The most commonly collected plants are wild vegetables: Cichorium intybus, Foeniculum vulgare, Sonchus oleraceus, Asparagus acutifolius, Papaver rhoeas, Rumex pulcher, Daucus carota, Allium ampeloprasum and Silene latifolia.

  18. Evolution of sex determination systems with heterogametic males and females in Silene

    Czech Academy of Sciences Publication Activity Database

    Šlancarová, Veronika; Ždánská, Jana; Janoušek, Bohuslav; Talianová, Martina; Zschach, C.; Žlůvová, Jitka; Široký, Jiří; Kováčová, Viera; Blavet, Hana; Danihelka, J.; Oxelman, B.; Widmer, A.; Vyskot, Boris

    2013-01-01

    Roč. 67, č. 12 (2013), s. 3669-3677 ISSN 0014-3820 R&D Projects: GA ČR(CZ) GA13-06264S; GA ČR(CZ) GAP501/10/0102; GA ČR(CZ) GBP501/12/G090; GA ČR(CZ) GAP501/12/2220 Institutional support: RVO:68081707 Keywords : ANCESTRAL CHARACTER STATES * MAXIMUM-LIKELIHOOD * DETERMINATION PATHWAY Subject RIV: BO - Biophysics Impact factor: 4.659, year: 2013

  19. Identification and characterization of a bacteria-like sequence in the genome of some Silene species

    Czech Academy of Sciences Publication Activity Database

    Talianová, Martina; Žlůvová, Jitka; Hobza, Roman; Vyskot, Boris; Janoušek, Bohuslav

    2012-01-01

    Roč. 56, č. 2 (2012), s. 247-253 ISSN 0006-3134 R&D Projects: GA ČR(CZ) GA521/08/0932; GA ČR(CZ) GA522/09/0083; GA ČR(CZ) GD204/09/H002 Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702 Keywords : horizontal gene transfer * microdissection * phylogenetic analysis Subject RIV: BO - Biophysics Impact factor: 1.692, year: 2012

  20. Notes on Alcyonidium erectum Silen, 1942 (Ectoprocta) from the Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Menon, N.R.

    Seventy new species were recorded during the study of the ectoproctous bryozoans of Indian waters Of these Alcyonidium erectum is of special interest Several zoaria of A erectum were collected from the appendages and carapace of Portunus pelagicus...

  1. Kebutuhan Fisur Silen Gigi Posterior pada Murid-Murid Sekolah Dasar di Kota Madya Medan

    Directory of Open Access Journals (Sweden)

    Lina Natamiharja

    2015-10-01

    Full Text Available The application of pit and fissure sealants is widely accepted practice in carious prevention, these materials were developed in an effort to prevent plaque, bacteria and carbohydrates penetrating pits and fissures of the teeth. Fissure sealants are effective in preventing occlusal carious in 33 out of every 100 teeth. The purpose of this study was to determine the needs of fissure sealant among the children age 6-13 years old. This study was carried out in two elementary schools. Samples was taken by sistematic random sampling based on age and sex. The totals of samples was 430 children. The needs of fissure sealant in the molars were quite high (36,75%, the highest percentage was in the lower first molar (49,64%, followed by the lower second molar (42,92%. In the premolars the needs was low (8,02%, the greatest needs was in the lower second premolar (15,79% followed by upper first premolar (7,50%.

  2. Mosaic Origins of a Complex Chimeric Mitochondrial Gene in Silene vulgaris

    Czech Academy of Sciences Publication Activity Database

    Štorchová, Helena; Müller, Karel; Lau, S.; Olson, M. S.

    2012-01-01

    Roč. 7, č. 2 (2012), e30401-- E-ISSN 1932-6203 R&D Projects: GA ČR GA521/09/0261; GA MŠk(CZ) LC06004; GA MŠk ME09035 Institutional research plan: CEZ:AV0Z50380511 Keywords : CYTOPLASMIC MALE-STERILITY * OPEN READING FRAME * COMPLETE NUCLEOTIDE-SEQUENCE Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.730, year: 2012

  3. Expression response of duplicated metallothionein 3 gene to copper stress in Silene vulgaris ecotypes

    Czech Academy of Sciences Publication Activity Database

    Nevrtalová, Eva; Baloun, Jiří; Hudzieczek, Vojtěch; Čegan, Radim; Vyskot, Boris; Doležel, Jaroslav; Šafář, Jan; Milde, D.; Hobza, Roman

    2014-01-01

    Roč. 251, č. 6 (2014), s. 1427-1439 ISSN 0033-183X R&D Projects: GA ČR(CZ) GAP501/12/2220; GA ČR(CZ) GBP501/12/G090; GA ČR(CZ) GP13-34962P; GA ČR(CZ) GA522/09/0083 Institutional support: RVO:68081707 Keywords : Copper * Gene duplication * Metallothionein Subject RIV: BO - Biophysics; EF - Botanics (UEB-Q) Impact factor: 2.651, year: 2014

  4. Noble strain of Sparassis latifolia produces high content of β-glucan

    Directory of Open Access Journals (Sweden)

    Dong Ju Lee

    2015-08-01

    Conclusions: These results indicate that the nucleotide sequences and the amino acid sequences of RPB2 can be used to identify individual Sparassis sp. The Sparassis strain CLM1 may be best for developing a remedy to prevent or treat cancer and other chronic diseases.

  5. La inocuidad alimentaria en el mercado Mexicano de Limón Persa (Citrus latifolia tanaka)

    OpenAIRE

    Herbert Ruiz, Marlene

    2012-01-01

    La globalización comercial exige que los mercados mundiales de productos agroalimentarios observen prácticas de inocuidad en sus productos: libres de contaminantes químicos, biológicos y físicos. En ese contexto, México modificó el 26 de julio de 2007 la Ley Federal de Sanidad Vegetal (LFSV), la cual ahora tiene como objetivo la aplicación, verificación y certificación de los sistemas de reducción de riesgos de contaminación en la producción y empaque de vegetales. El obje...

  6. DISTRIBUCIÓN RADICAL DE ÁRBOLES DE LIMÓN PERSA (Citrus latifolia Tan.

    Directory of Open Access Journals (Sweden)

    E. Contreras-Morales

    2008-01-01

    Full Text Available Este estudio fue hecho para conocer la distribución radical de árboles de limón persa cultivados en un suelo arenoso y uno arcilloso en Martínez de la Torre, Ver. Se empleó el método de la pared del perfil del suelo, clasificando las raíces en cuatro categorías de acuerdo con su diámetro: R1 (>15 mm, R2 (5-15 mm, R3 (1-5 mm y R4 (<1 mm. Las dimensiones de la cepa fueron 4 m de largo, 1 m de profundidad y 0.8 m de ancho y se construyeron tres por cada árbol (a 50 cm del tronco, zona de goteo y la parte media entre las anteriores. En cada tipo de suelo se emplearon cuatro árboles homogéneos los cuales tenían 12 años de edad en suelo arenoso y 9 años de edad en el arcilloso. Las raíces se agruparon en tres estratos de profundidad (de 0 a 30 cm; 30-60 cm y de 60-100 cm. Se analizó el número de raíces con el programa SAS considerando a la profundidad y a la distancia como factores. La mayor cantidad de raíces se presentó, para ambos tipos de suelo, en el estrato de 0-30 cm de profundidad decreciendo hacia los estratos más profundos. Se observó la tendencia en el número de raíces, a descender conforme se incrementa la distancia desde el tronco. Las raíces más numerosas fueron las R4 o fibrosas seguidas en orden decreciente por R3, R2 y R1.

  7. Nutritional value of organic acid lime juice (Citrus latifolia T., cv. Tahiti

    Directory of Open Access Journals (Sweden)

    Carolina Netto Rangel

    2011-12-01

    Full Text Available Acid lime can be used as fresh fruit or as juice to increase the flavor of drinks. Therefore, it is necessary to analyze organic acid lime nutritional composition in order to evaluate if there are important differences among those conventionally produced. No significant differences in total titrable acidity, pH, ascorbic acid, sucrose, calcium, and zinc were found between the acid lime juice from organic biodynamic crops and conventional crops. However, the organic biodynamic fruits presented higher peel percentage than the conventional ones leading to lower juice yield. On the other hand, fructose, glucose, total soluble solids contents, potassium, manganese, iron, and copper were higher in the conventional samples. These results indicated few nutritional differences between organic and conventional acid lime juices in some constituents. Nevertheless, fruit juice from biodynamic crops could be a good choice since it is free from pesticides and other agents that cause problems to human health maintaining the levels similar to those of important nutritional compounds.

  8. Iridoids as chemical markers of false ipecac (Ronabea emetica), a previously confused medicinal plant.

    Science.gov (United States)

    Berger, Andreas; Fasshuber, Hannes; Schinnerl, Johann; Robien, Wolfgang; Brecker, Lothar; Valant-Vetschera, Karin

    2011-12-08

    Several roots or rhizomes of rubiaceous species are reportedly used as the emetic and antiamoebic drug ipecac. True ipecac (Carapichea ipecacuanha) is chemically well characterized, in contrast to striated or false ipecac derived from the rhizomes of Ronabea emetica (syn. Psychotria emetica). Besides its previous use as substitute of ipecac, the latter species is applied in traditional medicine of Panama and fruits of its relative Ronabea latifolia are reported as curare additives from Colombia. Compounds of Ronabea emetica were isolated using standard chromatographic techniques, and structurally characterized by NMR spectroscopy and mass spectrometry. Organ specific distribution in Ronabea emetica as well as in Ronabea latifolia was further assessed by comparative HPLC analysis. Four iridoid-glucosides, asperuloside (1), 6α-hydroxygeniposide (2), deacetylasperulosidic acid (3) and asperulosidic acid (4) were extracted from leaves of Ronabea emetica. Rhizomes, used in traditional medicine, were dominated by 3. HPLC profiles of Ronabea latifolia were largely corresponding. These results contrast to the general tendency of producing emetine-type and indole alkaloids in species of Psychotria and closely related genera and merit chemotaxonomic significance, characterizing the newly delimited genus Ronabea. The aim of the work was to resolve the historic problem of adulteration of ipecac by establishing the chemical profile of Ronabea emetica, the false ipecac, as one of its less known sources. The paper demonstrates that different sources of ipecac can be distinguished by their phytochemistry, thus contributing to identifying adulterations of true ipecac. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

  9. Polymorphic Microsatellite Markers for the Tetrapolar Anther-Smut Fungus Microbotryum saponariae Based on Genome Sequencing

    Science.gov (United States)

    Fortuna, Taiadjana M.; Snirc, Alodie; Badouin, Hélène; Gouzy, Jérome; Siguenza, Sophie; Esquerre, Diane; Le Prieur, Stéphanie; Shykoff, Jacqui A.; Giraud, Tatiana

    2016-01-01

    Background Anther-smut fungi belonging to the genus Microbotryum sterilize their host plants by aborting ovaries and replacing pollen by fungal spores. Sibling Microbotryum species are highly specialized on their host plants and they have been widely used as models for studies of ecology and evolution of plant pathogenic fungi. However, most studies have focused, so far, on M. lychnidis-dioicae that parasitizes the white campion Silene latifolia. Microbotryum saponariae, parasitizing mainly Saponaria officinalis, is an interesting anther-smut fungus, since it belongs to a tetrapolar lineage (i.e., with two independently segregating mating-type loci), while most of the anther-smut Microbotryum fungi are bipolar (i.e., with a single mating-type locus). Saponaria officinalis is a widespread long-lived perennial plant species with multiple flowering stems, which makes its anther-smut pathogen a good model for studying phylogeography and within-host multiple infections. Principal Findings Here, based on a generated genome sequence of M. saponariae we developed 6 multiplexes with a total of 22 polymorphic microsatellite markers using an inexpensive and efficient method. We scored these markers in fungal individuals collected from 97 populations across Europe, and found that the number of their alleles ranged from 2 to 11, and their expected heterozygosity from 0.01 to 0.58. Cross-species amplification was examined using nine other Microbotryum species parasitizing hosts belonging to Silene, Dianthus and Knautia genera. All loci were successfully amplified in at least two other Microbotryum species. Significance These newly developed markers will provide insights into the population genetic structure and the occurrence of within-host multiple infections of M. saponariae. In addition, the draft genome of M. saponariae, as well as one of the described markers will be useful resources for studying the evolution of the breeding systems in the genus Microbotryum and the

  10. A comparison of pollen-siring ability and life history between males and hermaphrodites of subdioecious Silene acaulis

    DEFF Research Database (Denmark)

    Philipp, Marianne; Jakobsen, Ruth Bruus; Nachman, Gøsta Støger

    2009-01-01

    was performed in which females were hand A pollen-competition experiment was performed in which females were hand pollinated with a mixture of pollen from males and hermaphrodites, all with known isozyme alleles, which allowed determination of who sired each seed. We recorded plant size, flower morphology......, hermaphrodite, and male individuals. The sex expression of males and hermaphrodites can vary over years for the same individual, while females are always females. Previous studies have shown that outcrossed seeds from females become seedlings with higher survival and growth rates than those from outcrossed...... seeds from hermaphrodites.Questions: (1) Do pollen grains from males exhibit some advantage over pollen from (1) Do pollen grains from males exhibit some advantage over pollen from hermaphrodites? In particular, do they sire more seeds than hermaphrodites? (2) Is the reproductive system of S. acaulis...

  11. Transcription profiles of mitochondrial genes correlate with mitochondrial DNA haplotypes in a natural population of Silene vulgaris

    Czech Academy of Sciences Publication Activity Database

    Elansary, Hosam O; Müller, Karel; Olson, M.S.; Štorchová, Helena

    2010-01-01

    Roč. 10, č. 11 (2010), s. 1-10 ISSN 1471-2229 R&D Projects: GA ČR GA521/09/0261; GA MŠk(CZ) LC06004 Institutional research plan: CEZ:AV0Z50380511 Keywords : GYNODIOECIOUS PLANT * PATERNAL TRANSMISSION * MULTIPLE PROMOTERS Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 4.085, year: 2010

  12. Characterization of the HMA7 gene and transcriptomic analysis of candidate genes for copper tolerance in two Silene vulgaris ecotypes

    Czech Academy of Sciences Publication Activity Database

    Baloun, Jiří; Nevrtalová, Eva; Kováčová, Viera; Hudzieczek, Vojtěch; Čegan, Radim; Vyskot, Boris; Hobza, Roman

    2014-01-01

    Roč. 171, č. 13 (2014), s. 1188-1196 ISSN 0176-1617 R&D Projects: GA ČR(CZ) GBP501/12/G090; GA MŠk LO1204 Institutional support: RVO:68081707 Keywords : Copper * Genes coding ROS-eliminating and Cu-transporting proteins * RNA-Seq database Subject RIV: BO - Biophysics Impact factor: 2.557, year: 2014

  13. Characterization of the HMA7 gene and transcriptomic analysis of candidate genes for copper tolerance in two Silene vulgaris ecotypes

    Czech Academy of Sciences Publication Activity Database

    Baloun, J.; Nevrtalová, E.; Kováčová, V.; Hudzieczek, V.; Čegan, R.; Vyskot, B.; Hobza, Roman

    2014-01-01

    Roč. 171, č. 13 (2014), s. 1188-1196 ISSN 0176-1617 R&D Projects: GA ČR GBP501/12/G090 Institutional support: RVO:61389030 Keywords : Copper * Genes coding ROS-eliminating and Cu-transporting proteins * RNA-Seq database Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.557, year: 2014

  14. The ENEA criticality accident dosimetry system: a contribution to the 2002 international intercomparison at the SILENE reactor.

    Science.gov (United States)

    Gualdrini, G; Bedogni, R; Fantuzzi, E; Mariotti, F

    2004-01-01

    The present paper summarises the activity carried out at the ENEA Radiation Protection Institute for updating the methodologies employed for the evaluation of the neutron and photon dose to the exposed workers in case of a criticality accident, in the framework of the 'International Intercomparison of Criticality Accident Dosimetry Systems' (Silène reactor, IRSN-CEA-Valduc June 2002). The evaluation of the neutron spectra and the neutron dosimetric quantities relies on activation detectors and on unfolding algorithms. Thermoluminescent detectors are employed for the gamma dose measurement. The work is aimed at accurately characterising the measurement system and, at the same time, testing the algorithms. Useful spectral information were included, based on Monte Carlo simulations, to take into account the potential accident scenarios of practical interest. All along this exercise intercomparison a particular attention was devoted to the 'traceability' of all the experimental and computational parameters and therefore, aimed at an easy treatment by the user.

  15. Frequency-Dependent Disease Transmission and the Dynamics of the Silene-Ustilago Host-Pathogen System

    NARCIS (Netherlands)

    Thrall, P.H.; Biere, A.; Uyenoyama, M.K.

    1995-01-01

    Models incorporating density-dependent disease transmission functions generally provide a good fit for airborne and directly transmitted bacterial or viral diseases. However, the transmission dynamics of sexually transmitted and vector-borne diseases are likely to be frequency- rather than density-

  16. Intraspecific variation in mitochondrial genome sequence, structure, and gene content in Silene vulgaris, an angiosperm with pervasive cytoplasmic male sterility

    Czech Academy of Sciences Publication Activity Database

    Sloan, D.B.; Müller, Karel; McCauley, D.; Taylor, D.R.; Štorchová, Helena

    2012-01-01

    Roč. 196, č. 4 (2012), s. 1228-1239 ISSN 0028-646X R&D Projects: GA ČR GA521/09/0261; GA MŠk(CZ) LC06004; GA MŠk ME09035 Institutional research plan: CEZ:AV0Z50380511 Keywords : cytoplasmic male sterility (CMS) * gynodioecy * intracellular gene transfer Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 6.736, year: 2012

  17. The relative contribution of diurnal and nocturnal pollinators to plant female fitness in a specialized nursery pollination system.

    Science.gov (United States)

    Scopece, Giovanni; Campese, Lucia; Duffy, Karl J; Cozzolino, Salvatore

    2018-02-01

    Plants involved in specialized pollinator interactions, such as nursery pollination, may experience trade-offs in their female fitness, as the larvae of their pollinators may also consume seeds produced by the flowers they pollinate. These interactions could potentially shift between mutualism and parasitism, depending on the presence and abundance of both the nursery pollinator and of other pollinators. We investigated the fitness trade-off in a Mediterranean plant ( Silene latifolia ), which has a specialist nocturnal nursery pollinator moth ( Hadena bicruris ) and is also visited by several diurnal pollinators. We estimated the pollination rates and fecundity of S. latifolia in both natural and experimental populations in the Mediterranean. We estimated natural pollination rates in different flowering times and with presence/absence of the H. bicruis moth. Then by exposing plants to each pollinator group either during the day or at night, we quantified the contribution of other diurnal pollinators and the specialized nocturnal nursery pollinator to plant female fitness. We found no difference in plant fruit set mediated by diurnal versus nocturnal pollinators, indicating that non-specialist pollinators contribute to plant female fitness. However, in both natural and experimental populations, H. bicruris was the most efficient pollinator in terms of seeds produced per fruit. These results suggest that the female fitness costs generated by nursery pollination can be overcome through higher fertilization rates relative to predation rates, even in the presence of co-pollinators. Quantifying such interactions is important for our understanding of the selective pressures that promote highly specialized mutualisms, such as nursery pollination, in the Mediterranean region, a centre of diversification of the carnation family.

  18. Det offentliges snævre syn på konkurrence

    DEFF Research Database (Denmark)

    Ritter, Thomas

    2014-01-01

    Det er et mantra, men et stærkt funderet mantra, at velfungerende konkurrence på markeder er et godt fundament for virksomhedernes udvikling af deres konkurrenceevne - og dermed er konkurrence godt for velfærd og vækst....

  19. Syn for sagn. Dansk arkæologi og historie i 1800-tallet

    DEFF Research Database (Denmark)

    Gjerløff, Anne Katrine

    1999-01-01

    En undersøgelse af forholdet mellem historie og den forhistoriske arkæologi i Danmark i 1800-tallet. Der lægges vægt på arkæologiens professionalisering  og begyndende afvisning af de skriftlige kilders relevans for forhistorien og på kildeopfattelsens betydning for de to fags adskillelse og iden...

  20. Lawsonia inermis L. Syn. L. alba LamK. (Mehndi or Henna Hindi) of ...

    Indian Academy of Sciences (India)

    ... or rose-coloured, fragrant and borne on pyramidal bunches. Fruits bear numerous seeds. Hair dye is prepared from the leaves. The powdered leaf is the cosmetic henna which is used to stain the finger nails. Decoction of leaves is used as a gargle for sore throat. The bark is given for jaundice and enlargement of spleen.

  1. Förskolans estetik : Pedagogers syn på estetik i förskolan

    OpenAIRE

    Mellqvist, Andrea

    2009-01-01

    This examination paper defines how educators work with esthetic, and esthetic learning in pre-school. I have done research by interviewing four pedagogues. The result shows that the pedagogues does work with esthetic and practice esthetic learning processes, but their work shift. Some pedagoues practice strong esthetic and some practice more modest esthetic. Some of the pedagogues are more aware than other of the esthetics influens of the childrens life long learning. The learning about them ...

  2. Cicca disticha L. Syn. C. AcidaMerr. (English: Gooseberry-tree ...

    Indian Academy of Sciences (India)

    -size tree, which is often cultivatedfor itsfruits. Older branches show large scars where foliage branches ... Fruit is a depressed globose berry, lobed with fleshy outer and hard inner portions. The fleshy edible part of the fruit is sour and is pickled.

  3. Syn-Rift Systems of East Godavari Sub Basin: Its Evolution and Hydrocarbon Prospectivity

    Science.gov (United States)

    Dash, J., Jr.; Zaman, B.

    2014-12-01

    Krishna Godavari (K.G.) basin is a passive margin basin developed along the Eastern coast of India. This basin has a polyhistoric evolution with multiple rift systems. Rift basin exploration has provided the oil and gas industry with almost one third of discovered global hydrocarbon resources. Understanding synrift sequences, their evolution, depositional styles and hydrocarbon prospectivity has become important with recent discovery of the wells, G-4-6,YS-AF and KG-8 in the K.G. offshore basin. The East Godavari subbasin is a hydrocarbon producing basin from synrift and pre-rift sediments, and hence this was selected as the study area for this research. The study has been carried out by utilizing data of around 58 wells (w1-w58) drilled in the study area 25 of which are hydrocarbon bearing with organic thickness varying from 200 m to 600 m. Age data generated by palaentology and palynology studies have been utilized for calibration of key well logs to differentiate between formations within prerift and synrift sediments. The electrologs of wells like resistivity, gamma ray, neutron, density and sonic logs have been utilized for correlation of different formations in all the drilled wells. The individual thicknesses of sand, shale and coal in the formations have been calculated and tabulated. For Golapalli formation, the isopach and isolith maps were generated which revealed that there were four depocentres with input from the north direction. Schematic geological cross sections were prepared using the well data and seismic data to understand the facies variation across the basin. The sedimentological and petrophysical analysis reports and electro log suites were referred to decipher the environment of deposition, the reservoir characteristics, and play types. The geochemical reports [w4 (Tmax)= 455-468 °C; w1 (Tmax) = 467-514 °C; w4(VRO)= 0.65-0.85; w1(VRO)= 0.83-1.13] revealed the source facies, its maturation and migration timings i.e. the petroleum systems. It was concluded these fluvial channel systems constitute the main hydrocarbon play for the Mandapeta and Gollapalli formations and these channel systems if found at a structurally advantageous positions should prove to be good hydrocarbon targets.

  4. A fuzzy logic based network intrusion detection system for predicting the TCP SYN flooding attack

    CSIR Research Space (South Africa)

    Mkuzangwe, Nenekazi NP

    2017-04-01

    Full Text Available decision tree which is one of the well-known machine learning techniques. The results indicate that the performance difference, in terms of predicting the proportion of attacks in the data, of the proposed system with respect to the decision tree...

  5. Reproductive potential and nesting effects of Osmia rufa (syn. bicornis female (Hymenoptera: Megachilidae

    Directory of Open Access Journals (Sweden)

    Giejdasz Karol

    2016-06-01

    Full Text Available The red mason bee Osmia rufa is a solitary bee belonging to the family Megachilidae, and is prone to nest in aggregations. Each female builds a nest separately in pre-existing cavities such as holes in wood and walls or empty plant stems. This is done by successively setting the cells in a linear series. In this study, we elucidate the nesting behavior and the reproductive potential of a single O. rufa female. The reproductive potential of nesting females was evaluated after the offspring finished development. We observed that an individual female may colonize up to five nest tubes and build 5-34 cells in them (16 on an average. During the nesting time the number of cells decreased with the sequence of nest tubes colonized by one female, which built a maximum of 11 cells in the first occupied nest and 5 cells in the last (fifth nest. Our observations indicated that 40% of nesting females colonized one nest tube as compared to 7% colonizing five nest tubes. Furthermore, in subsequent nest tubes the number of cells with freshly emerged females gradually decreased which was the reverse with males. Thus, the sex ratio (proportion of male and female offspring may change during the nesting period. The female offspring predominated in the first two nesting tubes, while in the subsequent three tubes male offspring dominated. We also cataloged different causes of reduction in abundance of offspring in O. rufa females such as parasitization or problem associated with moulting.

  6. Control optimo de par para maquinas SynRM aplicadas a vehiculo electrico

    OpenAIRE

    Trancho, Elena; Ibarra, E.; Arias, A.; Kortabarria, I.

    2017-01-01

    Las maquinas de reluctancia sincrona asistidas por imanes estan atrayendo un considerable interes como alternativa a las maquinas sıncronas de imanes permanentes para su uso en sistemas de propulsion de vehıculos electricos. El control optimo de estas maquinas (incluyendo operacion en debilitamiento de campo) puede resultar complejo, ya que estas son, por lo general, muy sensibles al fenomeno de la saturacion magnetica. En este articulo se trata su control, desde los reguladores hasta el prec...

  7. Charles Darwin havde et nuanceret syn på dyreforsøg

    DEFF Research Database (Denmark)

    Alstrup, Aage Kristian Olsen

    2015-01-01

    Jeg har i en tidligere blog været inde på, hvordan Charles Darwins evolutionsteori har haft betydning for vores valg af forsøgsdyr. Men hvordan så Charles Darwin egentlig selv på dyreforsøg og dyrevelfærd? Faktisk var det et emne, der optog ham dybt. Allerede i 1838, over tyve år før...... offentliggørelsen af Arternes Oprindelse, gjorde han sig et notat om, at mennesket i sin arrogance føler sig hævet over andre skabninger, men at det snarere bør opfatte sig som skabt ud fra dyrene. Disse tanker kom dog først for alvor frem, da Charles Darwin i 1871 offentliggjorde bogen Menneskets Afstamning...

  8. SYN Flood Attack Detection in Cloud Computing using Support Vector Machine

    Directory of Open Access Journals (Sweden)

    Zerina Mašetić

    2017-11-01

    Full Text Available Cloud computing is a trending technology, as it reduces the cost of running a business. However, many companies are skeptic moving about towards cloud due to the security concerns. Based on the Cloud Security Alliance report, Denial of Service (DoS attacks are among top 12 attacks in the cloud computing. Therefore, it is important to develop a mechanism for detection and prevention of these attacks. The aim of this paper is to evaluate Support Vector Machine (SVM algorithm in creating the model for classification of DoS attacks and normal network behaviors. The study was performed in several phases: a attack simulation, b data collection, cfeature selection, and d classification. The proposedmodel achieved 100% classification accuracy with true positive rate (TPR of 100%. SVM showed outstanding performance in DoS attack detection and proves that it serves as a valuable asset in the network security area.

  9. Rootless calc-silicate folds in granite: An implication towards syn to ...

    Indian Academy of Sciences (India)

    36

    southernmost extension of the Southern Aravalli Mountain Belt (SAMB) in Gujarat and is. 24 located at the junction between the two older sequences, viz. the Lunavada Group in the north. 25. 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26. 27. 28. 29. 30. 31. 32. 33. 34. 35. 36. 37. 38. 39.

  10. Hydrogen separation from high temperature CO-containing syn-gas flow using molecular ceramic membranes

    Energy Technology Data Exchange (ETDEWEB)

    Soudarev, A.; Konakov, G.; Souryaninov, A.; Molchanov, A. [Boyko Research Engineering Ceramic Heat Engines Center Ltd., St. Petersburg (Russian Federation); Lelait, L.; Stevens, P.H. [European Inst. for Power Studies, Karlsruhe (Germany)

    2006-07-01

    Poisoning of the platinum (Pt) metals used as catalysts for proton exchange membrane fuel cells (PEMFCs) can negatively impact on PEMFC operation efficiency. In order to address this issue, a supply of hydrogen with a carbon monoxide (CO) admixtures is required. This paper provided details of a new type of molecular ceramic membrane (MCM) that allows the separation of hydrogen (H{sub 2}) from the hydrocarbon fuel reforming products that contain CO and has higher temperature and pressure capacity than other membranes. After various tests, alumo-magnesium spinel (AMS) was selected as the most promising porous material for the ceramic multi-layer membrane. The crystalline structure of the AMS showed good thermo-dynamic stability during tests that ranged between 20 and 1400 degrees C, as well as a chemical resistance relative to the effects of the aggressive fuel cell environment, and no exposure to the oxidation-recovery processes in the CO and H{sub 2} flow. The macroporous substrate of the AMS and the membrane selection layers have the same composition. The formation of the carrier was conducted by a semi-dry molding on a hydraulic press. Formation of the nano-porous structure in the carrier macro-pores by the polysilicon acid sol solution treatment allowed the synthesis of the amorphous silica and crystobalite crystals with a developed surface and nano-dimension subporosity. Test results have shown that the MCM has optimum penetrability and selectivity values as well as admissible thermo-mechanical properties. H{sub 2} flow through the membrane was 1.5-1.7 times greater than the CO flow. It was concluded that the AMS-based membrane devices will increase the efficiency of the PEMFC power plants and reduce their degradation capacity. 2 refs., 1 tab., 1 fig.

  11. SYN-JEM : A Quantitative Job-Exposure Matrix for Five Lung Carcinogens

    NARCIS (Netherlands)

    Peters, Susan; Vermeulen, Roel; Portengen, L??tzen; Olsson, Ann; Kendzia, Benjamin; Vincent, Raymond; Savary, Barbara; LavouCrossed Sign, Jcrossed D Signr??me; Cavallo, Domenico; Cattaneo, Andrea; Mirabelli, Dario; Plato, Nils; Fevotte, Joelle; Pesch, Beate; Br??ning, Thomas; Straif, Kurt; Kromhout, Hans

    2016-01-01

    OBJECTIVE The use of measurement data in occupational exposure assessment allows more quantitative analyses of possible exposure-response relations. We describe a quantitative exposure assessment approach for five lung carcinogens (i.e. asbestos, chromium-VI, nickel, polycyclic aromatic hydrocarbons

  12. SYN-JEM : A Quantitative Job-Exposure Matrix for Five Lung Carcinogens

    NARCIS (Netherlands)

    Peters, Susan; Vermeulen, Roel; Portengen, Lützen; Olsson, Ann C.; Kendzia, Benjamin; Vincent, Raymond; Savary, Barbara; LavouCrossed Sign, Jcrossed D.Signrôme; Cavallo, Domenico; Cattaneo, Andrea; Mirabelli, Dario; Plato, Nils; Fevotte, Joelle; Pesch, Beate; Brüning, Thomas; Straif, Kurt; Kromhout, Hans

    2016-01-01

    Objective: The use of measurement data in occupational exposure assessment allows more quantitative analyses of possible exposure-response relations. We describe a quantitative exposure assessment approach for five lung carcinogens (i.e. asbestos, chromium-VI, nickel, polycyclic aromatic

  13. The American species of the genus Glaucolepis Braun, 1917 (Neotrifurcula van Nieukerken, syn. nov.) (Lepidoptera: Nepticulidae)

    Science.gov (United States)

    We provide diagnostic characters for the genus Glaucolepis Braun, re-examine the type series of the type species of the North American G. saccharella Braun, describe two new species from Chile and Argentina (G. flagellata Remeikis & Stonis, sp. nov. and G. pseudoflagellata Remeikis & Stonis, sp. nov...

  14. Syn-rift unconformities punctuating the lower-middle Cambrian transition in the Atlas Rift, Morocco

    OpenAIRE

    Álvaro, J. Javier; Ezzouhairi, Hassan; Clausen, Sébastien; Ribeiro, Maria Luísa; Solá, Ana Rita

    2015-01-01

    The Cambrian Tamdroust and Bab n’Ali Volcanic Complexes represent two magmatic episodes developed in the latest Ediacaran–Cambrian Atlas Rift of Morocco. Their rifting pulses were accompanied by accumulation of volcanosedimentary edifices (dominated by effusive lava flows in the former and explosive acidic aprons in the latter) associated with active tilting and uplift. Sealing of their peneplaned horst-and-graben palaeotopographies led to the onset of distinct onlapping geometrie...

  15. Syn-rift unconformities punctuating the lower-middle Cambrian transition in the Atlas Rift, Morocco

    Science.gov (United States)

    Álvaro, J. Javier; Ezzouhairi, Hassan; Clausen, Sébastien; Ribeiro, M. Luisa; Solá, Rita

    2015-04-01

    The Cambrian Tamdroust and Bab n'Ali Volcanic Complexes represent two magmatic episodes developed in the latest Ediacaran-Cambrian Atlas Rift of Morocco. Their rifting pulses were accompanied by accumulation of volcanosedimentary edifices (dominated by effusive lava flows in the former and explosive acidic aprons in the latter) associated with active tilting and uplift. Sealing of their peneplaned horst-and-graben palaeotopographies led to the onset of distinct onlapping geometries and angular discordances capping eroded basements ranging from the Ediacaran Ouarzazate Supergroup to the Cambrian Asrir Formation. Previous interpretations of these discordances as pull-apart or compressive events are revised here and reinterpreted in an extensional (rifting) context associated with active volcanism. The record of erosive unconformities, stratigraphic gaps, condensed beds and onlapping patterns across the traditional "lower-middle Cambrian" (or Cambrian Series 2-3) transition of the Atlas Rift must be taken into consideration for global chronostratigraphic correlation based on their trilobite content.

  16. Role of syn-eruptive plagioclase disequilibrium crystallization in basaltic magma ascent dynamics.

    Science.gov (United States)

    La Spina, G; Burton, M; De' Michieli Vitturi, M; Arzilli, F

    2016-12-12

    Timescales of magma ascent in conduit models are typically assumed to be much longer than crystallization and gas exsolution for basaltic eruptions. However, it is now recognized that basaltic magmas may rise fast enough for disequilibrium processes to play a key role on the ascent dynamics. The quantification of the characteristic times for crystallization and exsolution processes are fundamental to our understanding of such disequilibria and ascent dynamics. Here we use observations from Mount Etna's 2001 eruption and a magma ascent model to constrain timescales for crystallization and exsolution processes. Our results show that plagioclase reaches equilibrium in 1-2 h, whereas ascent times were magma ascent rate and disequilibrium crystallization and exsolution plays a key role in controlling eruption dynamics in basaltic volcanism.

  17. Morphology and physiology of the dimorphic fungus Mucor circinelloides (syn. M. racemosus) during anaerobic growth

    DEFF Research Database (Denmark)

    Lübbehüsen, Tina Louise; Nielsen, Jens; Mcintyre, Mhairi

    2003-01-01

    The dimorphic Mucor circinelloides requires an anaerobic atmosphere and the presence of 30% CO2 to grow as a multipolar budding yeast, otherwise hyphal growth predominates. Establishing other means to control the morphology would be a distinct advantage in the development of a fermentation process...

  18. Growth physiology and dimorphism of Mucor circinelloides (syn. racemosus) during submerged batch cultivation

    DEFF Research Database (Denmark)

    Mcintyre, Mhairi; Breum, J.; Arnau, J.

    2002-01-01

    Mucor circinelloides is being investigated as a possible host for the production of heterologous proteins. Thus, the environmental conditions defining the physiology and morphology of this dimorphic fungus have been investigated in submerged batch cultivation. The optimal conditions for growth...

  19. Fremlæggelse af vores syn på menings- og undringsdreven innovation

    DEFF Research Database (Denmark)

    Hansen, Finn Thorbjørn; Herholdt-Lomholdt, Sine Maria

    2017-01-01

    I denne artikel ’slås tonen an’ ved at stille ind på den forundring, der oftest går forud for den mere filosofiske undren, og som knytter sig til en æstetisk transcendens-erfaring. Med idéhistorikeren Dorthe Jørgensen (Jørgensen, 2014) nuancerer vi, hvad det kan være for anelsesfulde og indfaldsp...... entreprenørtilgang til ’design-drevne innovation’, som f.eks. den danske innovationsorganisation MindLab trækker på, her eksemplificeret af Liedtka og Ogilvies (Liedtka & Ogilvie, 2011) model for designdreven innovation....

  20. Forfriskende syn på bæredygtighed (Refreshing view on sustainability)

    DEFF Research Database (Denmark)

    Nørgaard, Jørgen

    2009-01-01

    The article is a review of a Danish book, 'Sustainability- Nature shows the Way', on 269 pages presenting a view on sustainability different from usual. A system's sustainablity is based on thermodynamics' available work, for living systems multiplied with a genetic information factor. This ascri...... reversing deforestation....

  1. Computerized tomography of adrenal glands in the investigation of Cushing's syn

    International Nuclear Information System (INIS)

    Abucham Filho, J.; Albertotti, C.; Kater, C.E.; Vieira, J.G.H.; Chacra, A.R.

    1983-01-01

    Computerized tomography of the adrenal glands was performed in 10 patients with Cushing's syndrome using a G.E. 8800 CT/T Body Scanner. The tomographic findings of unilateral adrenal masses in 4 patients were confirmed by surgery. In the remaining 6 patients, computerized tomography did not identify any masses, and both glands were well visualized and showed normal shape. In these patients, measurement of the adrenal glands revealed both normal (n=1) and enlarged glands (n=5). The findings of adrenalectomy (n=4) or transphenoidal surgery and follow-up (n=2) established the diagnosis of adrenal phyperplasia in all patients. (Author) [pt

  2. Rattus norvegicus (Rodentia: Muridae Infected by Leishmania (Leishmania infantum (syn. Le. chagasi in Brazil

    Directory of Open Access Journals (Sweden)

    Fabiana de Oliveira Lara-Silva

    2014-01-01

    Full Text Available In the present study we surveyed the fauna of phlebotomine sand flies and small mammals in peridomestic areas from a Brazilian municipality where the American cutaneous leishmaniasis (ACL is endemic. A total of 608 female phlebotomine sand flies were captured during nine months in 2009 and 2010. Seven different species were represented with 60% of them being Lutzomyia intermedia and Lu. whitmani, both incriminated vectors of ACL. Lu. longipalpis, a proven vector of visceral leishmaniasis (VL was also captured at high proportion (12.8%. Genomic DNA analysis of 136 species-specific pools of female sand flies followed by molecular genotyping showed the presence of Leishmania infantum DNA in two pools of Lu. longipalpis. The same Leishmania species was found in one blood sample from Rattus norvegicus among 119 blood and tissue samples analysed. This is the first report of Le. infantum in R. norvegicus in the Americas and suggests a possible role for this rodent species in the zoonotic cycle of VL. Our study coincided with the reemergence of VL in Governador Valadares.

  3. Danske og svenske forbrugeres syn på e-handel med dagligvarer

    DEFF Research Database (Denmark)

    Kornum, Niels

    2003-01-01

    , at det er vigtigt at få forbrugerne til at prøve ordningerne f.eks. viatilbud og/eller forskellige medlemsfordele for at motivere dem til at indgå i ordningen. Detviser to nye undersøgelser gennemført af forskere fra Institut for Afsætningsøkonomi,Handelshøjskolen i København i samarbejde med forskere......,dels at de bliver mindre afhængige af butikkernes åbningstider. De vigtigste ulemper set fraforbrugerside er dels at online handel er mindre spændende end køb i supermarkedet, delsat der er begrænset adgang til at se og føle på varerne før køb i online butikken. Det er dogforbrugere, der ikke har handlet på...... deresdagligvareindkøb online. En medvirkende årsag kan dog desuden være, at mangeforbrugere ikke har tilstrækkeligt med informationer til at kunne skønne omfanget af deomkostninger, som må bæres af online leverandøren i forbindelse med pakning,distribution mv. af dagligvarerne.Undersøgelsen viser, at et klart og...

  4. Reproductive potential and nesting effects of Osmia rufa (Syn. Bicornis) female (Hymenoptera: Megachilidae)

    Czech Academy of Sciences Publication Activity Database

    Giejdasz, K.; Fliszkiewicz, M.; Bednářová, Andrea; Krishnan, N.

    2016-01-01

    Roč. 60, č. 1 (2016), s. 75-85 ISSN 1643-4439 Institutional support: RVO:60077344 Keywords : megachilidae * reproduction * nest Subject RIV: ED - Physiology Impact factor: 0.722, year: 2016 https://www.degruyter.com/view/j/jas.2016.60.issue-1/jas-2016-0003/jas-2016-0003.xml

  5. Genes and Structural Proteins of the Phage Syn5 of the Marine Cyanobacteria Synechococcus

    Science.gov (United States)

    2005-09-01

    Morgan et al., 2002; van de Putte et al., 1980). Inversion of the segment is controlled by a phage encoded invertase , expressed by the gene gin, which...growth of marine planktonic cyanobacteria. Methods in Enzymology , 167, 100-105. 170 Weigele, P.R., Scanlon, E. and King, J. (2003) Homotrimeric, beta

  6. Fault zone architecture within Miocene–Pliocene syn-rift sediments ...

    Indian Academy of Sciences (India)

    The present study focusses on field description of small normal fault zones in Upper Miocene–Pliocene sedimentary rocks on the northwestern side of the Red Sea, Egypt. The trend of these fault zones is mainly NW–SE. Paleostress analysis of 17 fault planes and slickenlines indicate that the tension direction is NE–SW.

  7. Immobilisation and characterisation of glucose dehydrogenase immobilised on ReSyn: a proprietary polyethylenimine support matrix

    CSIR Research Space (South Africa)

    Twala, BV

    2010-01-01

    Full Text Available Immobilisation of enzymes is of considerable interest due to the advantages over soluble enzymes, including improved stability and recovery. Glucose Dehydrogenase (GDH) is an important biocatalytic enzyme due to is ability to recycle the biological...

  8. Species-specific SSR alleles for studies of hybrid cattails (Typha latifolia × T. angustifolia; Typhaceae) in North America

    Czech Academy of Sciences Publication Activity Database

    Snow, A. A.; Travis, S. E.; Wildová, Radka; Fér, T.; Sweeney, P. M.; Marburger, J. E.; Windels, S.; Kubátová, B.; Goldberg, D. E.; Mutegi, E.

    2010-01-01

    Roč. 97, č. 12 (2010), s. 2061-2067 ISSN 0002-9122 Institutional research plan: CEZ:AV0Z60050516 Keywords : gene flow * hybrid * introgression * invasive species * molecular markers Subject RIV: EF - Botanics Impact factor: 3.052, year: 2010

  9. Bioassay-guided isolation of the antinociceptive compounds motiol and beta-sitosterol from Scorzonera latifolia root extract

    Czech Academy of Sciences Publication Activity Database

    Acikara, O. B.; Citoglu, G. S.; Dall'Acqua, S.; Özbek, H.; Cvačka, Josef; Žemlička, M.; Šmejkal, K.

    2014-01-01

    Roč. 69, č. 9 (2014), s. 711-714 ISSN 0031-7144 Institutional support: RVO:61388963 Keywords : natural products * folk medicine * antinociceptive activity Subject RIV: FR - Pharmacology ; Medidal Chemistry Impact factor: 1.052, year: 2014

  10. How to be an attractive male: floral dimorphism and attractiveness to pollinators in a dioecious plant

    Directory of Open Access Journals (Sweden)

    Waelti Marc O

    2009-08-01

    Full Text Available Abstract Background Sexual selection theory predicts that males are limited in their reproductive success by access to mates, whereas females are more limited by resources. In animal-pollinated plants, attraction of pollinators and successful pollination is crucial for reproductive success. In dioecious plant species, males should thus be selected to increase their attractiveness to pollinators by investing more than females in floral traits that enhance pollinator visitation. We tested the prediction of higher attractiveness of male flowers in the dioecious, moth-pollinated herb Silene latifolia, by investigating floral signals (floral display and fragrance and conducting behavioral experiments with the pollinator-moth, Hadena bicruris. Results As found in previous studies, male plants produced more but smaller flowers. Male flowers, however, emitted significantly larger amounts of scent than female flowers, especially of the pollinator-attracting compounds. In behavioral tests we showed that naïve pollinator-moths preferred male over female flowers, but this preference was only significant for male moths. Conclusion Our data suggest the evolution of dimorphic floral signals is shaped by sexual selection and pollinator preferences, causing sexual conflict in both plants and pollinators.

  11. A gravity model for the spread of a pollinator-borne plant pathogen.

    Science.gov (United States)

    Ferrari, Matthew J; Bjørnstad, Ottar N; Partain, Jessica L; Antonovics, Janis

    2006-09-01

    Many pathogens of plants are transmitted by arthropod vectors whose movement between individual hosts is influenced by foraging behavior. Insect foraging has been shown to depend on both the quality of hosts and the distances between hosts. Given the spatial distribution of host plants and individual variation in quality, vector foraging patterns may therefore produce predictable variation in exposure to pathogens. We develop a "gravity" model to describe the spatial spread of a vector-borne plant pathogen from underlying models of insect foraging in response to host quality using the pollinator-borne smut fungus Microbotryum violaceum as a case study. We fit the model to spatially explicit time series of M. violaceum transmission in replicate experimental plots of the white campion Silene latifolia. The gravity model provides a better fit than a mean field model or a model with only distance-dependent transmission. The results highlight the importance of active vector foraging in generating spatial patterns of disease incidence and for pathogen-mediated selection for floral traits.

  12. Pas de deux: An Intricate Dance of Anther Smut and Its Host

    Directory of Open Access Journals (Sweden)

    Su San Toh

    2018-02-01

    Full Text Available The successful interaction between pathogen/parasite and host requires a delicate balance between fitness of the former and survival of the latter. To optimize fitness a parasite/pathogen must effectively create an environment conducive to reproductive success, while simultaneously avoiding or minimizing detrimental host defense response. The association between Microbotryum lychnidis-dioicae and its host Silene latifolia serves as an excellent model to examine such interactions. This fungus is part of a species complex that infects species of the Caryophyllaceae, replacing pollen with the fungal spores. In the current study, transcriptome analyses of the fungus and its host were conducted during discrete stages of bud development so as to identify changes in fungal gene expression that lead to spore development and to identify changes associated with infection in the host plant. In contrast to early biotrophic phase stages of infection for the fungus, the latter stages involve tissue necrosis and in the case of infected female flowers, further changes in the developmental program in which the ovary aborts and a pseudoanther is produced. Transcriptome analysis via Illumina RNA sequencing revealed enrichment of fungal genes encoding small secreted proteins, with hallmarks of effectors and genes found to be relatively unique to the Microbotryum species complex. Host gene expression analyses also identified interesting sets of genes up-regulated, including those involving stress response, host defense response, and several agamous-like MADS-box genes (AGL61 and AGL80, predicted to interact and be involved in male gametophyte development.

  13. Life-cycle phases of a zinc- and cadmium-resistant ecotype of Silene vulgaris in risk assessment of polymetallic mine soils.

    NARCIS (Netherlands)

    Ernst, W.H.O.; Nelissen, H.J.M.

    2000-01-01

    Short-term exposure of plants to heavy metals is often used for risk assessment of metal-enriched soils (OECD guideline 208) without considering the reliability of the assessment for long-term exposure, i.e. for the completion of a plant's life-cycle. In the present study with 15 orogenic soils

  14. Cell-wall polysaccharide composition and glycanase activity of Silene vulgaris callus transformed with rolB and rolC genes.

    Science.gov (United States)

    Günter, Elena A; Shkryl, Yury N; Popeyko, Oxana V; Veremeichik, Galina N; Bulgakov, Victor P

    2015-03-15

    The aim of this research is to investigate the effects of the Agrobacterium rhizogenes rol genes on the composition of cell-wall polysaccharides and glycanase activity in the campion callus. The expression of the rolC gene reduces the yield of campion pectin, while the expression of the rolB or rolC gene inhibits the volumetric production of both pectin and intracellular arabinogalactan. The rol genes are involved in regulating the activity of glycanases and esterases, thereby contributing to the modification of polysaccharide structures, their molecular weight (Mw) and the degree of pectin methyl esterification (DE). The increase in pectin arabinose residue appears to be connected to a decrease in intracellular and extracellular α-l-arabinofuranosidase activity in transgenic campion calluses. In transgenic calluses expressing the rolB and rolC genes, the increase in pectin galactose residue is likely due to a decrease in β-galactosidase activity. The decrease in the Mw of pectin and its d-galacturonic acid content appears to be connected to an increase in extracellular polygalacturonase activity. Finally, the increase in pectinesterase activity causes a decrease in the DE of pectin. Thus, the expression of rolB and rolC genes in campion callus has a considerable effect on pectin's sugar composition, DE and Mw, while it appears to have an insignificant influence on intracellular and extracellular arabinogalactans. Copyright © 2014 Elsevier Ltd. All rights reserved.

  15. High transcript abundance, RNA editing, and small RNAs in intergenic regions within the massive mitochondrial genome of the angiosperm Silene noctiflora

    Czech Academy of Sciences Publication Activity Database

    Wu, Z.; Stone, James D.; Štorchová, Helena; Sloan, D.B.

    2015-01-01

    Roč. 16, NOV 14 (2015), s. 938 ISSN 1471-2164 R&D Projects: GA MŠk(CZ) EE2.3.30.0048 Institutional support: RVO:61389030 Keywords : Antisense RNA * Junk DNA * mtDNA Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.867, year: 2015

  16. In vitro propagation of Silene bolanthoides Quézel, Contandr. & Pamukç. and assessment of genetic stability by flow cytometry

    Directory of Open Access Journals (Sweden)

    Çördük Nurşen

    2018-01-01

    Full Text Available The non-target effects of 5-aza-2´-deoxycytidine (5-aza-dC, an epigenetically effective agent, were assessed on different life-history traits of two successive generations of Achroia grisella F. (Lepidoptera: Pyralidae by trophic exposure. The results did not reveal any prominent effect of 5-Aza-dC on emergence times and morphological disorders of offspring of both sexes, and dry weight of F1 females (except for 0.1 mg/ml and males according to controls. However, 5-Aza-dC caused a considerable decrease in wet weight of F1 females at >0.1 mg/mL and in F1 males only at 0.5 mg/mL. The mean longevity of F1 and F2 females was almost unchanged after exposure to 5-Aza-dC treatment. However, the longevity was considerably shorter, by 16% at a dose of 0.75 mg/mL for F1 males and 28% longer at 1.0 mg/mL for F2 males with respect to the controls. When the two generations were compared with each other in terms of adult longevity, the differences were not significant for the longevity of females, whereas F2 males lived significantly longer than F1 males in all groups except for the control and 0.5 mg/mL groups. 5-Aza-dC also markedly decreased the total number of both offspring but no dose-related alterations were observed. Analysis of the data for the number of viable and damaged eggs laid per F1 females revealed that 5-Aza-dC adversely affected the reproductive potential of A. grisella based on daily and three-day observations. The most striking effect was a decline in fecundity of females by 57% at 1.0 mg/mL. These observations suggest that 5-Aza-dC has a negative effect on developing moth progeny across trophic levels.

  17. Evaluation of reference genes for reverse transcription quantitative real-time PCR (RT-qPCR) studies in Silene vulgaris considering the method of cDNA preparation

    Czech Academy of Sciences Publication Activity Database

    Koloušková, Pavla; Stone, James D.; Štorchová, Helena

    2017-01-01

    Roč. 12, č. 8 (2017), č. článku e0183470. E-ISSN 1932-6203 R&D Projects: GA MŠk(CZ) LH15075; GA ČR(CZ) GA16-09220S Institutional support: RVO:61389030 Keywords : CYTOPLASMIC MALE -STERILITY * SUITABLE REFERENCE GENES * INTERNAL CONTROL GENES Subject RIV: EB - Genetics ; Molecular Biology OBOR OECD: Plant sciences, botany Impact factor: 2.806, year: 2016

  18. Both life-history plasticity and local adaptation will shape range-wide responses to climate warming in the tundra plant Silene acaulis.

    Science.gov (United States)

    Peterson, Megan L; Doak, Daniel F; Morris, William F

    2018-04-01

    Many predictions of how climate change will impact biodiversity have focused on range shifts using species-wide climate tolerances, an approach that ignores the demographic mechanisms that enable species to attain broad geographic distributions. But these mechanisms matter, as responses to climate change could fundamentally differ depending on the contributions of life-history plasticity vs. local adaptation to species-wide climate tolerances. In particular, if local adaptation to climate is strong, populations across a species' range-not only those at the trailing range edge-could decline sharply with global climate change. Indeed, faster rates of climate change in many high latitude regions could combine with local adaptation to generate sharper declines well away from trailing edges. Combining 15 years of demographic data from field populations across North America with growth chamber warming experiments, we show that growth and survival in a widespread tundra plant show compensatory responses to warming throughout the species' latitudinal range, buffering overall performance across a range of temperatures. However, populations also differ in their temperature responses, consistent with adaptation to local climate, especially growing season temperature. In particular, warming begins to negatively impact plant growth at cooler temperatures for plants from colder, northern populations than for those from warmer, southern populations, both in the field and in growth chambers. Furthermore, the individuals and maternal families with the fastest growth also have the lowest water use efficiency at all temperatures, suggesting that a trade-off between growth and water use efficiency could further constrain responses to forecasted warming and drying. Taken together, these results suggest that populations throughout species' ranges could be at risk of decline with continued climate change, and that the focus on trailing edge populations risks overlooking the largest potential impacts of climate change on species' abundance and distribution. © 2017 John Wiley & Sons Ltd.

  19. Chlorine Isotope Evidence for Syn-Subduction Modification of Serpentinites by Interaction with Sediment-Derived Fluid

    Science.gov (United States)

    Selverstone, J.; Sharp, Z. D.

    2012-12-01

    High-pressure serpentinites and rodingites and high- to ultrahigh-pressure metasedimentary rocks from the Aosta region, Italy, preserve strikingly different chlorine isotope compositions that can be used to constrain the nature of fluid-rock interactions during subduction. Serpentinites and rodingitized gabbroic dikes subducted to 70-80 km have bulk δ37Cl values between -1.6 and +0.9‰ (median= -0.5‰, n=26 plus 5 replicates; one amphibole-vein outlier at -2.9‰). Serpentinite δ37Cl values are positively correlated with Cr ± Cl contents (r2= 0.97 and 0.58) and negatively correlated with CaO (r2=0.72). BSE imaging and X-ray mapping reveal up to three generations of compositionally distinct serpentine and chlorite in single samples. The youngest generation, which is most abundant, has the lowest chlorine content. Three rodingite samples contain abundant texturally early fluid inclusions. These samples were finely crushed and leached in 18 MΩ H2O to extract water-soluble chlorides. The leachates, which are assumed to record the compositions of the fluid inclusions, have δ37Cl values that are 0.7-1.5‰ lower than the corresponding bulk rock values. Leachate from the outlier amph-magnesite vein is indistinguishable from the bulk value at -2.7‰. There is almost no overlap between the Cl isotope compositions of HP serp/rod samples and associated HP/UHP metasedimentary rocks. Calcmica schists, diamond-bearing Mn nodules, and impure marbles subducted to >130 km and calcmica schists and Mn crusts transported to 70-80 km have δ37Cl values between -4.5 and -1.5‰ (median= -2.7‰, n=25 plus 7 replicates; two outlier points at -0.5‰). Primary fluid inclusions in the diamondiferous samples contain carbonate- and silicate-bearing aqueous fluids with very low chloride contents (Frezzotti et al., 2011, Nature Geosci). Taken together, these data record a history of progressive modification of serpentinites and rodingites by mixing with low-δ37Cl, low-Cl, high-Ca fluids during subduction and metamorphism. Serpentinites with the highest Cr contents have Cl isotopic compositions identical to those of modern seafloor serpentinites (δ37Cl=0.2-0.6‰), consistent with primary serpentinization by seawater (e.g., Barnes et al. 2009, Lithos). Low-Cr serpentinites record significant interaction with a Ca-rich fluid that shifted the rocks to lower δ37Cl values and diluted the original Cr and Cl contents. The fluid was likely derived from continuous devolatilization reactions in associated low-δ37Cl, calcareous metasedimentary rocks. These data have important implications for models of subduction mass transfer associated with antigorite breakdown. If serpentinites are commonly modified by interaction with metasedimentary fluids prior to antigorite dehydration, chemical signatures imparted during deserpentinization will reflect the integrated history of fluid-rock interaction in the subduction channel rather than an endmember "serpentinite signature". The data further suggest that Cl may be hydrophobic in HP/UHP carbonate-bearing aqueous fluids, resulting in generation of low-Cl fluid during metamorphic devolatilization.

  20. Syn-extensional plutonism and peak metamorphism in the albion-raft river-grouse creek metamorphic core complex

    Science.gov (United States)

    Strickland, A.; Miller, E.L.; Wooden, J.L.; Kozdon, R.; Valley, J.W.

    2011-01-01

    The Cassia plutonic complex (CPC) is a group of variably deformed, Oligocene granitic plutons exposed in the lower plate of the Albion-Raft River- Grouse Creek (ARG) metamorphic core complex of Idaho and Utah. The plutons range from granodiorite to garnet-bearing, leucogranite, and during intrusion, sillimanite- grade peak metamorphism and ductile attenuation occurred in the country rocks and normal-sense, amphibolite-grade deformation took place along the Middle Mountain shear zone. U-Pb zircon geochronology from three variably deformed plutons exposed in the lower plate of the ARG metamorphic core complex revealed that each zircon is comprised of inherited cores (dominantly late Archean) and Oligocene igneous overgrowths. Within each pluton, a spread of concordant ages from the Oligocene zircon overgrowths is interpreted as zircon recycling within a long-lived magmatic system. The plutons of the CPC have very low negative whole rock ??Nd values of -26 to -35, and initial Sr values of 0.714 to 0.718, consistent with an ancient, crustal source. Oxygen isotope ratios of the Oligocene zircon overgrowths from the CPC have an average ??18O value of 5.40 ?? 0.63 permil (2SD, n = 65) with a slight trend towards higher ??18O values through time. The ??18O values of the inherited cores of the zircons are more variable at 5.93 ?? 1.51 permil (2SD, n = 29). Therefore, we interpret the plutons of the CPC as derived, at least in part, from melting Archean crust based on the isotope geochemistry. In situ partial melting of the exposed Archean basement that was intruded by the Oligocene plutons of the CPC is excluded as the source for the CPC based on field relationships, age and geochemistry. Correlations between Ti and Hf concentrations in zircons from the CPC suggest that the magmatic system may have become hotter (higher Ti concentration in zircon) and less evolved (lower Hf in zircon concentration) through time. Therefore, the CPC represents prolonged or episodic magmatism system (32-25 Ma), and the intrusions were each accompanied by sillimanite-grade deformation and extension. The Oligocene magmatism and peak metamorphism preserved in the ARG metamorphic core complex are likely related to regional trends in mantle-derived magmatism that led to protracted heating, melting and mobilization of the deeper crust.

  1. Den 11. olympiade - Berlin 1936. De danske avisers syn på sport og politik i 1930erne

    OpenAIRE

    Jensen, Rasmus Camillo

    2016-01-01

    This masters-thesis will examine how the six big Danish newspapers Arbejderbladet, Berlingske Tidende, Fyns Tidende, Jyllands-Posten, Politiken and Social-Demokraten wrote about the 1936 Olympics. The 1936 Olympics was held in Berlin, Germany, in a time where the Nazis, with Adolf Hitler as its leader, had the power. The purpose of this masters-thesis is to examine whether the six chosen newspapers referred to Nazis legislation in their coverage of the Olympics, because this legislation had i...

  2. Tectono-metamorphic evolution of the Jomolhari massif: Variations in timing of syn-collisional metamorphism across western Bhutan

    Science.gov (United States)

    Regis, Daniele; Warren, Clare J.; Young, David; Roberts, Nick M. W.

    2014-03-01

    Our current understanding of the rates and timescales of mountain-building processes is largely based on information recorded in U-bearing accessory minerals such as monazite, which is found in low abundance but which hosts the majority of the trace element budget. Monazite petrochronology was used to investigate the timing of crustal melting in migmatitic metasedimentary rocks from the Jomolhari massif (NW Bhutan). The samples were metamorphosed at upper amphibolite to granulite facies conditions (~ 0.85 GPa, ~ 800 °C), after an earlier High-Pressure stage (P > 1.4 GPa), and underwent partial melting through dehydration melting reactions involving muscovite and biotite. In order to link the timing of monazite growth/dissolution to the pressure-temperature (P-T) evolution of the samples, we identified 'chemical fingerprints' in major and accessory phases that were used to back-trace specific metamorphic reactions. Variations in Eu anomaly and Ti in garnet were linked to the growth and dissolution of major phases (e.g. growth of K-feldspar and dehydration melting of muscovite/biotite). Differences in M/HREE and Y from garnet core to rim were instead related to apatite breakdown and monazite-forming reactions. Chemically zoned monazite crystals reacted multiple times during the metamorphic evolution suggesting that the Jomolhari massif experienced a prolonged high-temperature metamorphic evolution from 36 Ma to 18 Ma, significantly different from the P-T-time path recorded in other portions of the Greater Himalayan Sequence (GHS) in Bhutan. Our data demonstrate unequivocally that the GHS in Bhutan consists of units that experienced independent high-grade histories and that were juxtaposed across different tectonic structures during exhumation. The GHS may have been exhumed in response to (pulsed) mid-crustal flow but cannot be considered a coherent block.

  3. Diastereodivergent Access to> Syn and Anti 3,4-Substituted β-Fluoropyrrolidines: Enhancing or Reversing Substrate Preference

    DEFF Research Database (Denmark)

    Fjelbye, Kasper; Marigo, Mauro; Clausen, Rasmus Prætorius

    2016-01-01

    A practical diastereodivergent access to β-fluoropyrrolidines with two adjacent stereocenters has been demonstrated, by either enhancing or completely reversing the substrate control, in the diastereoselective fluorination of a series of diverse pyrrolidinyl carbaldehydes using organocatalysis. F...

  4. Taming Radical Pairs in Nanocrystalline Ketones: Photochemical Syn-thesis of Compounds with Vicinal Stereogenic All-Carbon Quaternary Centers.

    Science.gov (United States)

    Dotson, Jordan J; Perez-Estrada, Salvador; Garcia-Garibay, Miguel A

    2018-05-29

    Here we describe the use of crystalline ketones to control the fate of the radical pair intermediates generated in the Norrish type I photodecarbonylation reaction to render it a powerful tool in the challenging synthesis of sterically congested carbon-carbon bonds. This methodology makes the synthetically more accessible hexasusbtituted ketones as ideal synthons for the construction of adjacent, all-carbon substituted, stereogenic quaternary stereocenters. We describe here the structural and thermochemical parameters required of the starting ketone in order to react in the solid state. Finally, the scope and scalability of the reaction and its application in the total synthesis of two natural products is described.

  5. The Jurassic of Denmark and Greenland: Shallow marine syn-rift sedimentation: Middle Jurassic Pelion Formation, Jameson Land, East Greenland

    Directory of Open Access Journals (Sweden)

    Engkilde, Michael

    2003-10-01

    Full Text Available The Middle Jurassic Pelion Formation – Fossilbjerget Formation couplet of Jameson Land, East Greenland, is a well-exposed example of the Middle Jurassic inshore–offshore successions characteristicof the rifted seaways in the Northwest European – North Atlantic region. Early Jurassic deposition took place under relatively quiet tectonic conditions following Late Permian – earliest Triassic and Early Triassic rift phases and the Lower Jurassic stratal package shows an overall layer-cake geometry. A long-term extensional phase was initiated in Middle Jurassic (Late Bajocian time, culminated in the Late Jurassic (Kimmeridgian–Volgian, and petered out in the earliest Cretaceous (Valanginian. The Upper Bajocian – Middle Callovian early-rift succession comprises shallow marine sandstones of the Pelion Formation and correlative offshore siltstones of theFossilbjerget Formation. Deposition was initiated by southwards progradation of shallow marine sands of the Pelion Formation in the Late Bajocian followed by major backstepping in Bathonian–Callovian times and drowning of the sandy depositional system in the Middle–Late Callovian. Six facies associations are recognised in the Pelion–Fossilbjerget couplet, representing estuarine, shoreface, offshore transition zone and offshore environments. The north–southtrendingaxis of the Jameson Land Basin had a low inclination, and deposition was sensitive to even small changes in relative sea level which caused the shorelines to advance or retreat over tens to several hundreds of kilometres. Eight composite sequences, termed P1–P8, are recognised and are subdivided into a total of 28 depositional sequences. The duration of the two orders of sequences was about 1–2 Ma and 360,000 years, respectively. The Upper Bajocian P1–2 sequencesinclude the most basinally positioned shallow marine sandstones, deposited during major sealevel lowstands. The lowstands were terminated by significant marine flooding events, during which sandstone deposition was restricted to northern, more proximal parts of the basin. The Upper Bajocian – Middle Bathonian P3–4 sequences show an overall progradational stacking pattern. The sequence boundary at the top of P4 marks a significant shift in stacking pattern, and the Upper Bathonian – Middle Callovian P5–8 sequences show large-scale backstepping, terminating in a widespread condensed succession at the distal, southern end of the basin. The largescalebackstepping was governed by combined tectonically-induced subsidence, reflecting increased rates of extension, and eustatic sea-level rise. The depositional trends of the Pelion Formation – Fossilbjerget Formation couplet provide a well-exposed analogue to contemporaneous subsurface deposits which form major hydrocarbon reservoirs on the west Norway shelf, and in the Northern North Sea.

  6. First report of latent infection of Cyperus rotundus caused by a biovar 3 Dickeya sp. (Syn. Erwinia chrysanthemi) in Israel

    NARCIS (Netherlands)

    Tsror, L.; Lebiush, S.; Erlich, O.; Ben-Daniel, B.; Wolf, van der J.M.

    2010-01-01

    Recent outbreaks of potato blackleg in Israel, caused by Dickeya spp., on plants grown from seed tubers imported from Northern Europe, are of a great concern. The warm climatic conditions during the growing season favour disease expression, and may result in the establishment of the pathogen in the

  7. Rifting and Subsidence in the Gulf of Mexico: Implications for Syn-rift, Sag, and Salt Sections, and Subsequent Paleogeography

    Science.gov (United States)

    Pindell, J. L.; Graham, R.; Horn, B.

    2013-05-01

    Thick (up to 5 km), rapid (depression where basement had already subsided tectonically, and thus could receive up to 5 km of salt, roughly the isostatic maximum on exhumed mantle, hyper-thinned continent, or new ocean crust. ION-GXT and other seismic data along W Florida and NW Yucatán show that (1) mother salt was only 1 km thick in these areas, (2) that these areas were depositionally connected to areas of thicker deposition, and (3) the top of all salt was at global sea level, and hence the sub-salt unconformity along Florida and Yucatán was only 1 km deep by end of salt deposition. These observations fit the air-filled chasm hypothesis; however, two further observations make that mechanism highly improbable: (1) basinward limits of sub-salt unconformities along Florida/Yucatán are deeper than top of adjacent ocean crust emplaced at ~2.7 km subsea (shown by backstripping), and (2) deepest abyssal sediments over ocean crust onlap the top of distal salt, demonstrating that the salt itself was rapidly drowned after deposition. Study of global ION datasets demonstrates the process of "rapid outer marginal collapse" at most margins, which we believe is achieved by low-angle detachment on deep, landward-dipping, Moho-equivalent surfaces such that outer rifted margins are hanging walls of crustal scale half-grabens over mantle. The tectonic accommodation space produced (up to 3 km, < 3 Ma) can be filled by ~5 km of sag/salt sequences with little apparent hanging wall rifting. When salt (or other) deposition lags behind, or ends during, outer marginal collapse, deep-water settings result. We suggest that this newly identified, "outer marginal detachment phase", normally separates the traditional "rift" from "drift" stages during continental margin creation. Importantly, this 2-3 km of subsidence presently is neither treated as tectonic nor as thermal in traditional subsidence analysis; thus, Beta estimates may be excessive at many outer margins. Outer marginal collapse was probably eastwardly diachronous with initiation of spreading in the GoM. Additionally, recent paleo-climate studies suggest humid Early/Middle Jurassic conditions in equatorial GoM, hindering air-filled chasm development, but North America's northward flight into middle latitudes initiated Callovian aridity.

  8. Effects of Syn-pandemic Fire Reduction and Reforestation in the Tropical Americas on Atmospheric Carbon Dioxide During European Conquest

    Science.gov (United States)

    Nevle, R. J.; Bird, D. K.

    2008-12-01

    A new reconstruction of the Late Holocene biomass burning history of the tropical Americas is consistent with expanding fire use by Mesoamerican and Amazonian agriculturalists from 2000-500 BP and a subsequent period of fire reduction due to indigenous demographic collapse. Our reconstruction synthesizes published data from 50 charcoal accumulation records obtained from stratified lacustrine sediments and from soils, including soil charcoal records recovered from archeological sites. Synthesis of stratigraphic charcoal records yields indexes of the mean rate of regional charcoal accumulation and of variability in charcoal accumulation among sites during 500-year increments since 3500 BP. The age distribution of dated soil charcoal particles from non-archeological sites provides an independent measure of variation in regional charcoal accumulation; whereas age distribution of soil charcoal dates from archeological sites records variation in charcoal accumulation related to anthropogenic biomass burning. We observe that the charcoal accumulation indexes derived from stratigraphic records begin to increase at 2000 BP, remain high until 500 BP, and then decline to near-minimum values during the 500-year period subsequent to European contact. Similarly, the age distributions of soil charcoal dated from both non-archeological and archeological sites indicate increases in charcoal accumulation from 2000 to 500 BP followed by decline. An index of the inter- site variability in charcoal accumulation obtained from the stratigraphic records attains a maximum during the time period between 1000 and 500 BP and a near-minimum value afterward. We interpret the covariation between measures of charcoal accumulation derived from archeological and non-archeological sites as a consequence of the expansive influence of anthropogenic activity on the regional fire regime. Increases in regional charcoal accumulation apparent in both the stratigraphic and soil charcoal records beginning at 2000 BP correlate with expanding indigenous population, agriculture, and fire use in the tropical Americas. The rise in inter-site variability in charcoal accumulation after 2000 BP is consistent with a demographic shift toward sedentary agrarian communities and localized increases in charcoal accumulation in densely populated centers. Declines in regional charcoal accumulation and inter-site variability after 500 BP suggest a correlative cause related to reduction in anthropogenic biomass burning resulting from pandemic-driven population collapse. Published reconstructions of Pre-Columbian demography indicate that during European conquest, pandemics killed ~90% of the indigenous American population (~60 million), estimated to represent ~20% of the 16th century global population. Our predictive calculations suggest that fire reduction in the tropical Americas is associated with massive forest regeneration on ~5 x 105 km2 of land and sequestration of 5-10 Gt C into the terrestrial biosphere, which can account for 13- 50% of the ~2% global reduction in atmospheric CO2 levels and the 0.1‰ increase in δ13C of atmospheric CO2 from 1500 to 1700 CE recorded in Antarctic ice cores and tropical sponges. New archeological discoveries revealing extensive networks of geoglyphs and urban polities in Pre-Columbian Amazonia suggest that our estimates of reforestation, and consequent effects on atmospheric CO2, may be conservative.

  9. Antibacterial activity of saponin and alkaloidal extracts of whole plant of phyllanthus niruri L., (Syn. P. franternus webster)

    International Nuclear Information System (INIS)

    Ajibade, V.A.; Famurewa, O.

    2011-01-01

    Saponins identified as phylagenin-13-O-alpha-D-glucopyranoside and phylangenin-25-O-beta-D- glucopyranoside and alkaloid, extracted from the whole plant of Phyllanthus niruri, were tested for minimum inhibitory concentration (MICs) against Staphylococus aureus, Staphylococus pyrogenes, Escherichia coli, Salmonella typhi and Klebsiella pneumoniae. MIC of saponin against S. aureus SSH22 and SSH23 ranged from 5-15 mu g/mL, and against E. coli OAUTH71 and K. pneumoniae OAUTH 54, from 15-60 mu g/mL. MICs increased with the increase in concentration of cells used in the inoculum. S. aureus SSH22 exhibited a paradoxical biphasic response to saponin in nutrient broth, whereas bacterial activity against E. coli SSH31 increased with concentration up to the highest concentration of saponin tested. Activity against E. coli OAUTH71 was more pronounced in the phosphate-buffered saline than in the nutrient broth. The other active compound extracted (alkaloid) gave MIC values between 200 and 600 mu g/mL. (author)

  10. Granitoid emplacement during syn-convergent transtension: An example from the Huamenlou pluton in North Qinling, central China

    Directory of Open Access Journals (Sweden)

    Yang Li

    2018-01-01

    Full Text Available The Huamenlou pluton, is an elongated granite intrusion with high aspect ratio, emplaced within the southern margin of the North Qinling (central China. Here we investigate this pluton through multiple techniques including the fabric study, microstructural observation and zircon geochronology. Our zircon U–Pb data confirm that the granite crystallized at ca. 462 Ma which is consistent with the ages of other linear plutons in North Qinling. Microstructural observations of the Huamenlou granites illustrate that the pluton has undergone superimposed deformation during its emplacement, from magmatic to high-temperature solid state conditions. The internal fabric obtained by anisotropy of magnetic susceptibility (AMS and shape preferred orientation (SPO show similar results. The fabrics are relatively concordant and generally vary from NE–SW to NEE–SWW which are roughly oblique to the trend of the pluton elongation and the regional structures. Meanwhile, scalar parameters reflect two completely different strain regimes for the pluton and its host rocks, i.e., the fabrics within host rocks are mainly oblate while the central part of the intrusion displays mainly prolate fabrics. It is inferred that the structural pattern recorded in this pluton was caused by local dextral transtension in consequence of oblique convergence between the South and North China Blocks. We propose that the local transtension in convergence setting probably evolved from vertical extrusion tectonics that provided room for the magma emplacement and imparted prolate fabrics in the Huamenlou pluton.

  11. Granitic magma emplacement and deformation during early-orogenic syn-convergent transtension: The Stare Sedlo complex, Bohemian Massif

    Czech Academy of Sciences Publication Activity Database

    Tomek, Filip; Žák, J.; Chadima, Martin

    2015-01-01

    Roč. 87, JUL (2015), s. 50-66 ISSN 0264-3707 Institutional support: RVO:67985831 Keywords : anisotropy of magnetic susceptibility (AMS) * Bohemian Massif * pluton emplacement * granite * transtension * Variscan orogeny Subject RIV: DB - Geology ; Mineralogy Impact factor: 1.926, year: 2015

  12. Assessment of recent outbreaks of Dickeya sp (syn. Erwinia chrysanthemi) slow wilt in potato crops in Israel

    NARCIS (Netherlands)

    Tsror, L.; Erlich, O.; Lebiush, S.; Hazanovsky, M.; Zig, U.; Slawiak, M.; Grabe, G.; Wolf, van der J.M.; Haar, van de J.J.

    2009-01-01

    Suspected Dickeya sp. strains were obtained from potato plants and tubers collected from commercial plots. The disease was observed on crops of various cultivars grown from seed tubers imported from the Netherlands during the spring seasons of 2004-2006, with disease incidence of 2-30% ( 10% in

  13. Neotectonics of the Roer Valley rift system; style and rate of crustal deformation inferred from syn-tectonic sedimentation

    NARCIS (Netherlands)

    Berg, van den M.W.

    1995-01-01

    River sediments of the Meuse, Rhine and local Belgian systems have been preserved in various parts of the Roer Valley rift. Age-altitude positions of Meuse terraces provide a detailed record of neotectonic regional uplift. It shows accelerations and decelerations superimposed on a long-term average

  14. Laboratory evaluation of a new strain CCM 8367 of Isaria fumosorosea (syn. Paecilomyces fumosoroseus) on Spodoptera littoralis (Boisd.)

    Czech Academy of Sciences Publication Activity Database

    Hussein, Hany; Zemek, Rostislav; Habuštová, Oxana; Prenerová, Eva; Adel, M. M.

    2013-01-01

    Roč. 46, č. 11 (2013), s. 1307-1319 ISSN 0323-5408 R&D Projects: GA MŠk 2B06005 Institutional support: RVO:60077344 Keywords : entomopathogenic fungi * Isaria fumosorosea * CCM 8367 Subject RIV: GF - Plant Pathology, Vermin, Weed, Plant Protection

  15. 17 børns syn på skolen i skoleåret 2016-2017

    DEFF Research Database (Denmark)

    Broström, Stig

    , at pigerne er målrettede og opgaveorienterede, mens drengene er larmende og vil være hurtigt færdige. Men når de har givet det generaliserende svar, tager de sig selv i det og reflekterer over, at det faktisk kommer an på personen. De hæver sig altså op over det stereotype billede af drenge og piger«. »Jeg...... konflikter. Pigerne går mere i detaljer og diskuterer for eksempel farven på opgavens omslag. Det, synes drengene, er latterligt«. Det ligner, at de fleste elever giver udtryk for en meget traditionel opfattelse af, at drengene larmer, og pigerne arbejder hårdere? »Ja, det kan man godt sige. Men drengene er...... har brug for mere kropslig aktivitet. Det siger noget om, at reformen kalder på mere bevægelse. Men det er ikke rigtig lykkedes«. Hvad er status på reformen blandt eleverne? »Generelt er alle glade for at gå i skole. De synes, det er dejligt at lære noget. Men det bliver rigtig spændende at gå i skole...

  16. Syn-kinematic palaeogeographic evolution of the West European Platform: correlation with Alpine plate collision and foreland deformation

    NARCIS (Netherlands)

    Sissingh, W.

    Sequence stratigraphic correlations indicate that intermittent changes of the kinematic far-field stress-field regimes, and the associated geodynamic re-organisations at the plate-tectonic contacts of the African, Apulian, Iberian and European plates, affected the Tertiary palaeogeographic evolution

  17. Controls and measurements of KU engine test cells for biodiesel, SynGas, and assisted biodiesel combustion

    Science.gov (United States)

    Cecrle, Eric Daniel

    This thesis is comprised of three unique data acquisition and controls (CDAQ) projects. Each of these projects differs from each other; however, they all include the concept of testing renewable or future fuel sources. The projects were the following: University of Kansas's Feedstock-to-Tailpipe Initiative's Synthesis Gas Reforming rig, Feedstock-to-Tailpipe Initiative's Biodiesel Single Cylinder Test Stand, and a unique Reformate Assisted Biodiesel Combustion architecture. The main responsibility of the author was to implement, develop and test CDAQ systems for the projects. For the Synthesis Gas Reforming rig, this thesis includes a report that summarizes the analysis and solution of building a controls and data acquisition system for this setup. It describes the purpose of the sensors selected along with their placement throughout the system. Moreover, it includes an explanation of the planned data collection system, along with two models describing the reforming process useful for system control. For the Biodiesel Single Cylinder Test Stand, the responsibility was to implement the CDAQ system for data collection. This project comprised a variety of different sensors that are being used collect the combustion characteristics of different biodiesel formulations. This project is currently being used by other graduates in order to complete their projects for subsequent publication. For the Reformate Assisted Biodiesel Combustion architecture, the author developed a reformate injection system to test different hydrogen and carbon monoxide mixtures as combustion augmentation. Hydrogen combustion has certain limiting factors, such as pre-ignition in spark ignition engines and inability to work as a singular fuel in compression ignition engines. To offset these issues, a dual-fuel methodology is utilized by injecting a hydrogen/carbon monoxide mixture into the intake stream of a diesel engine operating on biodiesel. While carbon monoxide does degrade some of the desirable properties of hydrogen, it acts partially like a diluent in order to prevent pre-ignition from occurring. The result of this mixture addition allows the engine to maintain power while reducing biodiesel fuel consumption with a minimal NOx emissions increase.

  18. Seismic evidence for arc segmentation, active magmatic intrusions and syn-rift fault system in the northern Ryukyu volcanic arc

    Science.gov (United States)

    Arai, Ryuta; Kodaira, Shuichi; Takahashi, Tsutomu; Miura, Seiichi; Kaneda, Yoshiyuki

    2018-04-01

    Tectonic and volcanic structures of the northern Ryukyu arc are investigated on the basis of multichannel seismic (MCS) reflection data. The study area forms an active volcanic front in parallel to the non-volcanic island chain in the eastern margin of the Eurasian plate and has been undergoing regional extension on its back-arc side. We carried out a MCS reflection experiment along two across-arc lines, and one of the profiles was laid out across the Tokara Channel, a linear bathymetric depression which demarcates the northern and central Ryukyu arcs. The reflection image reveals that beneath this topographic valley there exists a 3-km-deep sedimentary basin atop the arc crust, suggesting that the arc segment boundary was formed by rapid and focused subsidence of the arc crust driven by the arc-parallel extension. Around the volcanic front, magmatic conduits represented by tubular transparent bodies in the reflection images are well developed within the shallow sediments and some of them are accompanied by small fragments of dipping seismic reflectors indicating intruded sills at their bottoms. The spatial distribution of the conduits may suggest that the arc volcanism has multiple active outlets on the seafloor which bifurcate at crustal depths and/or that the location of the volcanic front has been migrating trenchward over time. Further distant from the volcanic front toward the back-arc (> 30 km away), these volcanic features vanish, and alternatively wide rift basins become predominant where rapid transitions from normal-fault-dominant regions to strike-slip-fault-dominant regions occur. This spatial variation in faulting patterns indicates complex stress regimes associated with arc/back-arc rifting in the northern Okinawa Trough.[Figure not available: see fulltext.

  19. Ny politikk på diabetesfeltet? Nøkkelinformanters syn på dagens og morgendagens tilbud

    Directory of Open Access Journals (Sweden)

    Christina Foss

    2016-12-01

    Health care service for patients with chronic diseases has undergone fundamental changes in recent years: focus on self-management, de-centralisation to municipals with an emphasis on prevention and an urge for interdisciplinary and intersectoral collaboration. In the operationalization of the political signals to specific measures in the field, key actors’ understanding influences the formulation of policy. As part of a larger international study (EU-Wise qualitative semi-structural interview was performed with 15 informants who hold key positions with an ability to influence the specific implementation of health policy for people with type 2 diabetes. The key informants showed abundant variation in what they saw as important challenges and measures. The informants have few descriptions of initiatives to fight social inequalities and were vague in their descriptions of measures that are not individual-oriented. The vagueness may indicate the need for more specific recommendations of measures in the field

  20. N-Phenyl-2-p-tolylthiazole-4-carboxamide derivatives: Syn-thesis and cytotoxicity evaluation as anticancer agents

    Directory of Open Access Journals (Sweden)

    Ahmad Mohammadi-Farani

    2014-07-01

    Conclusion: A new series of phenylthiazole derivatives were synthesized and their anticancer activity was assessed against cancerous cell lines. More structural modifications and derivatization is necessary to achieve to the more potent compounds.       

  1. Facile and Highly Diastereoselective Synthesis of syn- and cis-1,2-Diol Derivatives from Protected alpha-Hydroxy Ketones

    Czech Academy of Sciences Publication Activity Database

    Jahn, Emanuela; Smrček, Jakub; Pohl, Radek; Císařová, I.; Jones, P. G.; Jahn, Ullrich

    2015-01-01

    Roč. 2015, č. 35 (2015), s. 7785-7798 ISSN 1434-193X Grant - others:COST(XE) CM1201 Institutional support: RVO:61388963 Keywords : synthetic methods * reduction * diastereoselectivity * diols * ketones Subject RIV: CC - Organic Chemistry Impact factor: 3.068, year: 2015

  2. Sexual dimorphism in white campion: complex control of carpel number is revealed by Y chromosome deletions

    International Nuclear Information System (INIS)

    Lardon, A.; Georgiev, S.; Aghmir, A.; Le Merrer, G.; Negrutiu, I.

    1999-01-01

    Sexual dimorphism in the dioecious plant white campion (Silene latifolia = Melandrium album) is under the control of two main regions on the Y chromosome. One such region, encoding the gynoecium-suppressing function (GSF), is responsible for the arrest of carpel initiation in male flowers. To generate chromosomal deletions, we used pollen irradiation in male plants to produce hermaphroditic mutants (bsx mutants) in which carpel development was restored. The mutants resulted from alterations in at least two GSF chromosomal regions, one autosomal and one located on the distal half of the (p)-arm of the Y chromosome. The two mutations affected carpel development independently, each mutation showing incomplete penetrance and variegation, albeit at significantly different levels. During successive meiotic generations, a progressive increase in penetrance and a reduction in variegation levels were observed and quantified at the level of the Y-linked GSF (GSF-Y). Possible mechanisms are proposed to explain the behavior of the bsx mutations: epigenetic regulation or/and second-site mutation of modifier genes. In addition, studies on the inheritance of the hermaphroditic trait showed that, unlike wild-type Y chromosomes, deleted Y chromosomes can be transmitted through both the male and the female lines. Altogether, these findings bring experimental support, on the one hand, to the existence on the Y chromosome of genic meiotic drive function(s) and, on the other hand, to models that consider that dioecy evolved through multiple mutation events. As such, the GSF is actually a system containing more than one locus and whose primary component is located on the Y chromosome

  3. Influence of Multiple Infection and Relatedness on Virulence: Disease Dynamics in an Experimental Plant Population and Its Castrating Parasite

    Science.gov (United States)

    Buono, Lorenza; López-Villavicencio, Manuela; Shykoff, Jacqui A.; Snirc, Alodie; Giraud, Tatiana

    2014-01-01

    The level of parasite virulence, i.e., the decrease in host's fitness due to a pathogen, is expected to depend on several parameters, such as the type of the disease (e.g., castrating or host-killing) and the prevalence of multiple infections. Although these parameters have been extensively studied theoretically, few empirical data are available to validate theoretical predictions. Using the anther smut castrating disease on Silene latifolia caused by Microbotryum lychnidis-dioicae, we studied the dynamics of multiple infections and of different components of virulence (host death, non-recovery and percentage of castrated stems) during the entire lifespan of the host in an experimental population. We monitored the number of fungal genotypes within plants and their relatedness across five years, using microsatellite markers, as well as the rates of recovery and host death in the population. The mean relatedness among genotypes within plants remained at a high level throughout the entire host lifespan despite the dynamics of the disease, with recurrent new infections. Recovery was lower for plants with multiple infections compared to plants infected by a single genotype. As expected for castrating parasites, M. lychnidis-dioicae did not increase host mortality. Mortality varied across years but was generally lower for plants that had been diseased the preceding year. This is one of the few studies to have empirically verified theoretical expectations for castrating parasites, and to show particularly i) that castrated hosts live longer, suggesting that parasites can redirect resources normally used in reproduction to increase host lifespan, lengthening their transmission phase, and ii) that multiple infections increase virulence, here in terms of non-recovery and host castration. PMID:24892951

  4. Lower prevalence but similar fitness in a parasitic fungus at higher radiation levels near Chernobyl.

    Science.gov (United States)

    Aguileta, Gabriela; Badouin, Helene; Hood, Michael E; Møller, Anders P; Le Prieur, Stephanie; Snirc, Alodie; Siguenza, Sophie; Mousseau, Timothy A; Shykoff, Jacqui A; Cuomo, Christina A; Giraud, Tatiana

    2016-07-01

    Nuclear disasters at Chernobyl and Fukushima provide examples of effects of acute ionizing radiation on mutations that can affect the fitness and distribution of species. Here, we investigated the prevalence of Microbotryum lychnidis-dioicae, a pollinator-transmitted fungal pathogen of plants causing anther-smut disease in Chernobyl, its viability, fertility and karyotype variation, and the accumulation of nonsynonymous mutations in its genome. We collected diseased flowers of Silene latifolia from locations ranging by more than two orders of magnitude in background radiation, from 0.05 to 21.03 μGy/h. Disease prevalence decreased significantly with increasing radiation level, possibly due to lower pollinator abundance and altered pollinator behaviour. Viability and fertility, measured as the budding rate of haploid sporidia following meiosis from the diploid teliospores, did not vary with increasing radiation levels and neither did karyotype overall structure and level of chromosomal size heterozygosity. We sequenced the genomes of twelve samples from Chernobyl and of four samples collected from uncontaminated areas and analysed alignments of 6068 predicted genes, corresponding to 1.04 × 10(7)  base pairs. We found no dose-dependent differences in substitution rates (neither dN, dS, nor dN/dS). Thus, we found no significant evidence of increased deleterious mutation rates at higher levels of background radiation in this plant pathogen. We even found lower levels of nonsynonymous substitution rates in contaminated areas compared to control regions, suggesting that purifying selection was stronger in contaminated than uncontaminated areas. We briefly discuss the possibilities for a mechanistic basis of radio resistance in this nonmelanized fungus. © 2016 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

  5. Identification and Initial Characterization of the Effectors of an Anther Smut Fungus and Potential Host Target Proteins

    Directory of Open Access Journals (Sweden)

    Venkata S. Kuppireddy

    2017-11-01

    Full Text Available (1 Background: Plant pathogenic fungi often display high levels of host specificity and biotrophic fungi; in particular, they must manipulate their hosts to avoid detection and to complete their obligate pathogenic lifecycles. One important strategy of such fungi is the secretion of small proteins that serve as effectors in this process. Microbotryum violaceum is a species complex whose members infect members of the Caryophyllaceae; M. lychnidis-dioicae, a parasite on Silene latifolia, is one of the best studied interactions. We are interested in identifying and characterizing effectors of the fungus and possible corresponding host targets; (2 Methods: In silico analysis of the M. lychnidis-dioicae genome and transcriptomes allowed us to predict a pool of small secreted proteins (SSPs with the hallmarks of effectors, including a lack of conserved protein family (PFAM domains and also localized regions of disorder. Putative SSPs were tested for secretion using a yeast secretion trap method. We then used yeast two-hybrid analyses for candidate-secreted effectors to probe a cDNA library from a range of growth conditions of the fungus, including infected plants; (3 Results: Roughly 50 SSPs were identified by in silico analysis. Of these, 4 were studied further and shown to be secreted, as well as examined for potential host interactors. One of the putative effectors, MVLG_01732, was found to interact with Arabidopsis thaliana calcium-dependent lipid binding protein (AtCLB and with cellulose synthase interactive protein 1 orthologues; and (4 Conclusions: The identification of a pool of putative effectors provides a resource for functional characterization of fungal proteins that mediate the delicate interaction between pathogen and host. The candidate targets of effectors, e.g., AtCLB, involved in pollen germination suggest tantalizing insights that could drive future studies.

  6. Wild vegetable mixes sold in the markets of Dalmatia (southern Croatia).

    Science.gov (United States)

    Łuczaj, Łukasz; Zovkokončić, Marijana; Miličević, Tihomir; Dolina, Katija; Pandža, Marija

    2013-01-03

    Dalmatia is an interesting place to study the use of wild greens as it lies at the intersection of influence of Slavs, who do not usually use many species of wild greens, and Mediterranean culinary culture, where the use of multiple wild greens is common. The aim of the study was to document the mixtures of wild green vegetables which are sold in all the vegetable markets of Dalmatia. All vendors (68) in all 11 major markets of the Dalmatian coast were interviewed. The piles of wild vegetables they sold were searched and herbarium specimens taken from them. The mean number of species in the mix was 5.7. The most commonly sold wild plants are: Sonchus oleraceus L., Allium ampeloprasum L., Foeniculum vulgare Mill., Urospermum picroides F.W.Schmidt, Papaver rhoeas L., Daucus carota L., Taraxacum sp., Picris echioides L., Silene latifolia Poir. and Crepis spp. Also the cultivated beet (Beta vulgaris L.) and a few cultivated Brassicaceae varieties are frequent components. Wild vegetables from the mix are usually boiled for 20-30 minutes and dressed with olive oil and salt. Altogether at least 37 wild taxa and 13 cultivated taxa were recorded.Apart from the mixes, Asparagus acutifolius L. and Tamus communis L. shoots are sold in separate bunches (they are usually eaten with eggs), as well as some Asteraceae species, the latter are eaten raw or briefly boiled. The rich tradition of eating many wild greens may result both from strong Venetian and Greek influences and the necessity of using all food resources available in the barren, infertile land in the past. Although the number of wild-collected green vegetables is impressive we hypothesize that it may have decreased over the years, and that further in-depth local ethnobotanical studies are needed in Dalmatia to record the disappearing knowledge of edible plants.

  7. Wild vegetable mixes sold in the markets of Dalmatia (southern Croatia

    Directory of Open Access Journals (Sweden)

    Łuczaj Łukasz

    2013-01-01

    Full Text Available Abstract Background Dalmatia is an interesting place to study the use of wild greens as it lies at the intersection of influence of Slavs, who do not usually use many species of wild greens, and Mediterranean culinary culture, where the use of multiple wild greens is common. The aim of the study was to document the mixtures of wild green vegetables which are sold in all the vegetable markets of Dalmatia. Methods All vendors (68 in all 11 major markets of the Dalmatian coast were interviewed. The piles of wild vegetables they sold were searched and herbarium specimens taken from them. Results The mean number of species in the mix was 5.7. The most commonly sold wild plants are: Sonchus oleraceus L., Allium ampeloprasum L., Foeniculum vulgare Mill., Urospermum picroides F.W.Schmidt, Papaver rhoeas L., Daucus carota L., Taraxacum sp., Picris echioides L., Silene latifolia Poir. and Crepis spp. Also the cultivated beet (Beta vulgaris L. and a few cultivated Brassicaceae varieties are frequent components. Wild vegetables from the mix are usually boiled for 20–30 minutes and dressed with olive oil and salt. Altogether at least 37 wild taxa and 13 cultivated taxa were recorded. Apart from the mixes, Asparagus acutifolius L. and Tamus communis L. shoots are sold in separate bunches (they are usually eaten with eggs, as well as some Asteraceae species, the latter are eaten raw or briefly boiled. Conclusions The rich tradition of eating many wild greens may result both from strong Venetian and Greek influences and the necessity of using all food resources available in the barren, infertile land in the past. Although the number of wild-collected green vegetables is impressive we hypothesize that it may have decreased over the years, and that further in-depth local ethnobotanical studies are needed in Dalmatia to record the disappearing knowledge of edible plants.

  8. Assessing radiation exposure of herbaceous plant species at the East-Ural Radioactive Trace

    International Nuclear Information System (INIS)

    Karimullina, Elina; Antonova, Elena; Pozolotina, Vera

    2013-01-01

    The East-Ural Radioactive Trace (EURT) is a result of the Mayak Production Association accident that occurred in 1957 in Russia. Radiological assessment improves the interpretation of biological effects of exposure to ionizing radiation. Therefore a modeling approach was used to estimate dose rates on Leonurus quinquelobatus, Silene latifolia, Stellaria graminea and Bromus inermis. Soil-to-organism transfer parameter values are delivered from empirical data of 90 Sr and 137 Cs soil and vegetative plant mass activity concentrations. External and internal whole-body dose rates were calculated using deterministic (The ERICA Tool-Tier 2 and R and D 128/SP1a) and probabilistic (The ERICA Tool-Tier 3) methods. The total dose rate for herbs was under 100 μGy h −1 at the most polluted site. The total absorbed dose rates increased 43–110 times (Tier 3) for different herbaceous plant species along the pollution gradient. Based on these data, it can be concluded that herbaceous plant populations currently exist under low-level chronic exposure at the EURT area. -- Highlights: • A modeling approach (The ERICA Tool-Tier 2, Tier 3 and R and D 128/SP1a) was used to estimate dose rates for herbs growing in the wild at the East-Ural Radioactive Trace. • The highest levels of anthropogenic radiation exposure were determined for herbs at Impact EURT sites. • Total absorbed dose rates increased 43–110 times (Tier 3) for different herbaceous plant species along the pollution gradient. • Total dose rate per plant organism for herbs is under 100 μGy h −1 at the most polluted site. Currently herbaceous plant populations exist under low-level chronic exposure at the EURT area

  9. Effect of N:P ratio of influent on biomass, nutrient allocation, and recovery of Typha latifolia and Canna 'Bengal Tiger' in a laboratory-scale constructed wetland

    Science.gov (United States)

    Constructed wetlands (CWs) are an effective low-technology approach for treating agricultural, industrial, and municipal wastewater. Recovery of phosphorous by constructed wetland plants may be affected by wastewater nitrogen to phosphorous (N:P) ratios. Varying N:P ratios were supplied to Canna '...

  10. Growth Modeling of Aspergillus niger Strains Isolated from Citrus Fruit as a Function of Temperature on a Synthetic Medium from Lime (Citrus latifolia T.) Pericarp.

    Science.gov (United States)

    Sandoval-Contreras, T; Marín, S; Villarruel-López, A; Gschaedler, A; Garrido-Sánchez, L; Ascencio, F

    2017-07-01

    Molds are responsible for postharvest spoilage of citrus fruits. The objective of this study was to evaluate the effect of temperature on growth rate and the time to visible growth of Aspergillus niger strains isolated from citrus fruits. The growth of these strains was studied on agar lime medium (AL) at different temperatures, and growth rate was estimated using the Baranyi and Roberts model (Int. J. Food Microbiol. 23:277-294, 1994). The Rosso et al. cardinal model with inflexion (L. Rosso, J. R. Lobry, S. Bajard, and J. P. Flandrois, J. Theor. Biol. 162:447-463, 1993) was used as a secondary model to describe the effect of temperature on growth rate and the lag phase. We hypothesized that the same model could be used to calculate the time for the mycelium to become visible (t v ) by substituting the lag phase (1/λ and 1/λ opt ) with the time to visible colony (1/t v -opt and 1/t v ), respectively, in the Rosso et al. High variability was observed at suboptimal conditions. Extremes of temperature of growth for A. niger seem to have a normal variability. For the growth rate and time t v , the model was satisfactorily compared with results of previous studies. An external validation was performed in lime fruits; the bias and accuracy factors were 1.3 and 1.5, respectively, for growth rate and 0.24 and 3.72, respectively, for the appearance time. The discrepancy may be due to the influence of external factors. A. niger grows significantly more slowly on lime fruit than in culture medium, probably because the nutrients are more easily available in medium than in fruits, where the peel consistency may be a physical barrier. These findings will help researchers understand the postharvest behavior of mold on lime fruits, host-pathogen interactions, and environmental conditions infecting fruit and also help them develop guidelines for future work in the field of predictive mycology to improve models for control of postharvest fungi.

  11. Effects of introgression on the genetic population structure of two ecologically and economically important conifer species: lodgepole pine (Pinus contorta var. latifolia) and jack pine (Pinus banksiana).

    Science.gov (United States)

    Cullingham, Catherine I; Cooke, Janice E K; Coltman, David W

    2013-10-01

    Forest trees exhibit a remarkable range of adaptations to their environment, but as a result of frequent and long-distance gene flow, populations are often only weakly differentiated. Lodgepole and jack pine hybridize in western Canada, which adds the opportunity for introgression through hybridization to contribute to population structure and (or) adaptive variation. Access to large sample size, high density SNP datasets for these species would improve our ability to resolve population structure, parameterize introgression, and separate the influence of demography from adaptation. To accomplish this, 454 transcriptome reads for lodgepole and jack pine were assembled using Newbler and MIRA, the assemblies mined for SNPs, and 1536 SNPs were selected for typing on lodgepole pine, jack pine, and their hybrids (N = 536). We identified population structure using both Bayesian clustering and discriminate analysis of principle components. Introgressed SNP loci were identified and their influence on observed population structure was assessed. We found that introgressed loci resulted in increased differentiation both within lodgepole and jack pine populations. These findings are timely given the recent mountain pine beetle population expansion in the hybrid zone, and will facilitate future studies of adaptive traits in these ecologically important species.

  12. Contexto y Caracterización de la Cadena de Suministro del Limón Persa (Citrus latifolia Tanaka) en Veracruz-México

    OpenAIRE

    Gregorio Fernández-Lambert; Alberto Antonio Aguilar-Lasserre; Gustavo Martínez-Castellanos; María Leocelia Guadalupe Ruvalcaba-Sánchez; Juan Gabriel Correa-Medina; José Luis Martínez-Flores

    2015-01-01

    Esta investigación se realiza en el Distrito Citrícola de Martínez de la Torre, Ver., con alcance a los municipios de Álamo Temapache, y Cuitláhuac en Veracruz, y reporta el contexto e integración de la cadena de suministro del limón persa. El estudio de sus eslabones permitió identificar las problemáticas de abastecimiento, operación y distribución en dicha cadena. A partir de entrevistas abiertas no estructuradas a especialistas, técnicos, productores y empresarios, así como la consult...

  13. MODELOS MATEMÁTICOS PARA LA ESTIMACIÓN DE BIOMASA DE ÓRGANOS AÉREOS DE LIMÓN 'PERSA' (Citrus latifolia Tan.

    Directory of Open Access Journals (Sweden)

    L. A. Crespo-Herrera

    2007-01-01

    Full Text Available En muchos de los estudios de crecimiento de las plantas se requiere evaluar la biomasa, lo cual normalmente implica la destrucción de los árboles. En el presente trabajo se generaron modelos matemáticos de alta confiabilidad que estiman la cantidad de biomasa de órganos aéreos de limón 'Persa' con base en otras variables que no requieren la destrucción del material vegetal y además son de fácil medición. Para ello, se separaron ramas, hojas y frutos de los árboles y se les midió la cantidad de biomasa además del área foliar de las hojas y otras características morfológicas inherentes a cada tipo de órgano. Se encontró que la cantidad de biomasa de cada órgano se encuentra estrechamente relacionada con las siguientes características: para las ramas, el volumen calculado por las fórmulas del cono y cono truncado, en los casos de las ramas no podadas y podadas, respectivamente; para los frutos, el diámetro ecuatorial, y para las hojas, la longitud de la lámina y su ancho máximo. Se generaron modelos para cada órgano con coeficientes de determinación muy elevados (entre 0.9528 y 0.9981 y C(p aceptable (entre 1.6696 y 16.3685, para modelos de 2 a 4 variables.

  14. ADOPCIÓN DE INNOVACIONES EN LIMON ‘PERSA’ (Citrus latifolia Tan. EN TLAPACOYAN, VERACRUZ. USO DE BITÁCORA

    Directory of Open Access Journals (Sweden)

    Gustavo Almaguer-Vargas

    2014-01-01

    Full Text Available Con el fin de mejorar la eficiencia de la adopción de innovaciones tecnológicas en el cultivo de limón ‘Persa’ en San Pedro Tlapacoyan, Veracruz e incrementar el rendimiento de este frutal y la relación beneficio/costo (B/C de esta actividad eco- nómica, se empleó la “metodología de innovación de la bitácora”, la cual se trabajó con 26 productores de esta comunidad durante tres ciclos de producción: 2005/2006, 2006/2007 y 2007/2008. Esta metodología consistió en realizar un diag- nóstico, recomendaciones (asesoría, seguimiento, evaluación y control de innovaciones realizadas por el productor, por parte de un prestador de servicios profesionales. Las variables evaluadas fueron porcentaje de adopción de innovaciones, atributos de productores, ingresos, costos de producción, rendimiento y relación B/C. En el primer ciclo de producción se obtuvo un rendimiento de 5.24 t∙ha-1 y relación beneficio/costo de 1.55, atribuible al reducido porcentaje de adopción de innovaciones, que fue de 15. Después de aplicar la metodología propuesta, los ingresos del segundo ciclo se incremen- taron 64 % con respecto a los del ciclo inicial, y 41 % entre 2006/07 y 2007/08. La relación B/C aumentó 68 % (de 1.56 a 2.28, lo cual se asoció al incremento de 29.6 del porcentaje de adopción de innovaciones.

  15. Distribución de materia seca y nutrimentos en árboles de limón 'persa' (citrus latifolia tan. en Veracruz, México

    Directory of Open Access Journals (Sweden)

    E. Contreras-Morales

    2007-01-01

    Full Text Available El presente estudio se llevó a cabo en dos huertas de limón 'Persa' cada una en diferente tipo de suelo, con la finalidad de conocer la distribución de materia seca y nutrimentos en los órganos de cítricos y determinar su estado nutrimental. La huerta 1 de 12 años de edad estaba creciendo en suelo arcillo-migajón arenoso y la huerta 2, de 9 años de edad, en suelo arcilloso. El método de estudio consistió en extraer completamente cuatro árboles por huerta y fraccionarlos en sus diferentes órganos: hoja, flor, fruto, ramas, tronco y raíces. Las variables determinadas fueron: peso fresco y peso seco de cada órgano. Se determinó la concentración de nutrimentos por análisis químicos: N, P, K, Ca, Mg, B, Cu, Fe, Mn y Zn. Los datos de ambas huertas fueron sometidos a análisis de varianza y prueba de comparación de medias por separado. Las raíces fibrosas (< 1 mm de diámetro para ambas huertas presentaron concentraciones altas de micronutrimentos destacando Fe y Mn. Para ambas huertas los nutrimentos extraídos en mayor cantidad por el fruto fueron K y Ca; y en menor cantidad Zn y Cu. Con relación a la distribución de biomasa, el tronco y ramas aportaron el 60.32 %; el conjunto de raíces el 26.93 % y las hojas el 9.41 % de la materia seca total del árbol, mientras que el N en hojas representó el 17.5 % del total de la planta, en la huerta1. Esto representó 1.85 veces más de nitrógeno, con relación al peso seco de las hojas. Datos similares se tuvieron en la huerta 2. Para ambas huertas el Cu y el N fueron los nutrimentos más requeridos.

  16. Soil Characteristics and Lodgepole Pine (Pinus contorta var. latifolia Performance Two Decades after Disk Trenching of Unburned and Broadcast-Burned Plots in Subboreal British Columbia

    Directory of Open Access Journals (Sweden)

    Jacob O. Boateng

    2011-01-01

    Full Text Available We examined the effects of low-impact broadcast-burning and disk-trenching planting position (control, hinge, trench on soil characteristics and lodgepole pine foliar nutrition and growth over two decades at a subboreal site in British Columbia, Canada. Broadcast burning had virtually no effect on either the bulk density or chemical properties of soil. In contrast, significant reductions in soil bulk density and increases in soil nutrient availability persisted for 20 years in hinge position soils relative to undisturbed (control soil between trenches. These effects on bulk density and nutrient availability are associated with significant differences in pine size by year 6. Burning and planting positions interacted significantly in their effect on pine height, diameter, and stem volume for at least 19 years. Pine survival was high regardless of burning or planting position. Neither broadcast burning nor planting position significantly affected lodgepole pine foliar nutrient status in this study.

  17. Protective potentials of wild rice (Zizania latifolia (Griseb) Turcz) against obesity and lipotoxicity induced by a high-fat/cholesterol diet in rats.

    Science.gov (United States)

    Han, Shu-Fen; Zhang, Hong; Zhai, Cheng-Kai

    2012-07-01

    The study evaluates the protective potentials of wild rice against obesity and lipotoxicity induced by a high-fat/cholesterol diet in rats. In addition to the rats of low-fat diet group, others animals were exposed to a high-fat/cholesterol diet condition for 8 weeks. The city diet (CD) is based on the diet consumed by urban residents in modern China, which is rich in fat/cholesterol and high in carbohydrates from white rice and processed wheat starch. The chief source of dietary carbohydrates of wild rice diet (WRD) is from Chinese wild rice and other compositions are the same with CD. Rats fed CD showed elevated body and liver organ weights, lipid profiles, free fatty acids (FFA) and leptin comparable with rats fed high-fat/cholesterol diet (HFD) known to induce obesity and hyperlipidaemia in this species. However, rats consuming WRD suppressed the increase of lipid droplets accumulation, FFA, and leptin, and the decrease of lipoprotein lipase and adipose triglyceride lipase. Meanwhile, WRD prevented high-fat/cholesterol diet-induced elevation in protein expression of sterol-regulatory element binding protein-1c, and gene expression of fatty acid synthase and acetyl-CoA carboxylase. These findings indicate that wild rice as a natural food has the potentials of preventing obesity and liver lipotoxicity induced by a high-fat/cholesterol diet in rats. Copyright © 2012 Elsevier Ltd. All rights reserved.

  18. Views on quality assurance at Finnish and Swedish nuclear power plants and at Halden Reactor; Syn paa kvalitetssaekring vid finlaendska och svenska kaernkraftverk samt vid Haldenreaktorn

    Energy Technology Data Exchange (ETDEWEB)

    Hammar, L.; Lidh, B. [ES-konsult (Sweden); Wahlstroem, B.; Reiman, T. [VTT Automation (Finland)

    2001-06-01

    The paper reports on a study within the Nordic Nuclear Safety Research, NKS on quality systems at nuclear installations in Finland, Norway and Sweden. In the study a total of 74 people at the NPPs in Barsebaeck, Forsmark, Loviisa, Olkiluoto, Oskarshamn and Ringhals, and at the research reactor in Halden were interviewed in the period 30 August to 13 December 2000 concerning their views in regard of quality and quality systems. The study was concluded with a seminar held in the Ringhals nuclear power plant in Januar 2001. The study covered a number of aspects in regard of quality management, including the quality concept, quality systems, topical quality issues and approaches, rules and procedures, competency and training, the process approach to quality management, the promotion of quality consciousness and future prospects. The study reflects the significant progress made in the management of quality in nuclear power in the Nordic countries since the early phase in the seventies. The most distinctive characteristic of today's approach to quality is seen in that responsibility for the quality is assumed directly in conjunction with the working processes. It could be noted that the work patterns at the nuclear installations have been largely modified during the recent years as a result of persistent endeavours to continuously improve the quality of operation. Challenges were seen in currently reduced revenues due to descending electricity prices and the likely prospect of further increased regulatory safety requirements. The report is aimed for those working with quality issues at the nuclear power plants as well as for those interested in quality management in general or in the safety aspects of nuclear power in particular. (au)

  19. Stock density and fruit yield of African walnut, Plukenetia conophora Mull-Arg (Syn. Tetracarpidium conophorum in tropical lowland rainforests of southwest Nigeria

    Directory of Open Access Journals (Sweden)

    TO Amusa

    2014-12-01

    Full Text Available Despite the huge socio-economic potentials of the African walnut, Plukenetia conophora Mull-Arg, there is a dearth of information on stock density and yield studies under different site conditions. Therefore, this study was carried out to investigate the stock density and fruit yields of P. conophora in three different habitats (i.e. less disturbed natural forest, recently disturbed natural forest and plantation forest within Omo Forest Reserve (OFR and Shasha Forest Reserve (SFR of Nigeria. Stratified random sampling technique was used to carry out inventory survey. Fruit yields were determined by collecting fruit falls through double sampling approach. Both descriptive and inferential statistics were used in analyzing the data at P = 0.05. Stock densities of P. conophora were 5.33+1.7stands/ha, 14.67+2.05stands/ha and 16.00+2.94stands/ha in OFR, while they were 7.33+0.47stands/ha, 14.67+1.25stands/ha and 10.67+04.7stands/ha in SFR for recently disturbed forest, less disturbed forest and plantation forest respectively. There were significant differences in number and distribution of species by forest types, but not between forest reserves. The mean yield of P. conophora/ha/yr was estimated at 7,800.00kg for OFR and 6,534.00kg for SFR. Yields from plantation area contributed more in OFR, while yields from less disturbed natural forest area were higher in SFR. Yields from recently disturbed natural forest were consistently lower in the two reserves. These results show that P. conophora thrives better in plantation and old re-growth forests. This information is pertinent towards improving the management of the species, increase its productivity and enhance benefits in a more sustainable manner to the rural populace.

  20. Control óptimo de par para máquinas SynRM aplicadas a vehículo eléctrico

    OpenAIRE

    Trancho, Elena; Ibarra Basabe, Edorta; Arias Pujol, Antoni; Kortabarria, Iñigo

    2017-01-01

    Las máquinas de reluctancia síncrona asistidas por imanes están atrayendo un considerable interés como alternativa a las máquinas síncronas de imanes permanentes para su uso en sistemas de propulsión de vehículos eléctricos. El control óptimo de estas máquinas (incluyendo operación en debilitamiento de campo) puede resultar complejo, ya que estas son, por lo general, muy sensibles al fenómeno de la saturación magnética. En este artículo se trata su control, desde los reguladores hasta el prec...

  1. High morphological plasticity and global geographical distribution ofthe Pacific broad tapeworm Adenocephalus pacificus (syn.Diphyllobothrium pacificum): Molecular and morphological survey

    Czech Academy of Sciences Publication Activity Database

    Hernández-Orts, Jesús S.; Scholz, Tomáš; Brabec, Jan; Kuzmina, T.; Kuchta, Roman

    2015-01-01

    Roč. 149, SEP 2015 (2015), s. 168-178 ISSN 0001-706X R&D Projects: GA ČR GAP506/12/1632 Institutional support: RVO:60077344 Keywords : biogeography * Cestoda * cox1 * lsrDNA * helminth * Diphyllobothriidea * diphyllobothriosis * phylogeny * Pseudophyllidea * seals Subject RIV: EG - Zoology Impact factor: 2.380, year: 2015

  2. Restauration des propriétés mécaniques originelles des sédiments repris en glissements synsédimentaires (slumping)

    OpenAIRE

    Nguyen Cong , Nghia

    2007-01-01

    The sedimentary modification in form of synsedimentary slumping is a witness of long-term geodynamic evolution of a sedimentary basin. This study of the Vocontian Basin (South-East of France), in paleogeographic context of submarine valley, tried to highlight the role of the initial properties of sediment in the phenomenon of submarine sliding. Main part of accomplished works concerns limestone-marl alternations and their modifications (slumps) during Hauterivian, particularly in the region o...

  3. Moestrupia oblonga gen. et comb. nov. (syn.: Gyrodinium oblongum), a new marine dinoflagellate genus characterized by light and electron microscopy, photosynthetic pigments and LSU rDNA sequence

    DEFF Research Database (Denmark)

    Hansen, Gert; Daugbjerg, Niels

    2011-01-01

    A small-sized, peridinin-containing, athecate dinoflagellate (13–17 µm long) was isolated into clonal culture from a water sample collected at a nearshore location in Tenerife, Spain (October 2004). Based on phenotypic characters (size, shape, pyrenoid and nucleus position), the culture was ident...... the anterior part of the ventral flange to the middorsal side of the episome. Thus, it differs markedly from that in species of Gyrodinium and emphasizes it being distantly related to this genus...

  4. The age, palaeoclimate, palaeovegetation, coal seam architecture/mire types, paleodepositional environments and thermal maturity of syn-collision paralic coal from Mukah, Sarawak, Malaysia

    Science.gov (United States)

    Sia, Say-Gee; Abdullah, Wan Hasiah; Konjing, Zainey; Koraini, Ahmad Munif

    2014-02-01

    The Mukah coal accumulated in the Balingian Formation where the time-stratigraphic position is poorly defined by fauna, though a probable Late Miocene age has always been assigned to this formation. Samples collected in the present study that yielded an abundance of Casuarina pollen associated with occurrences of Dacrydium, Stenochlaena palustris, Florschuetzia levipoli and also Stenochlaena areolaris spores, compare closely to zone PR9 of the palynological zonation of the Malay Basin, and can be tied to depositional sequences of Malay Basin Seismic sequences I2000/I3000, indicating an Early Miocene age for the studied coal. The Early Miocene age shows that the Mukah coal was formed during the collision between Luconia Block-Dangerous Grounds with the Borneo that lasted from Late Eocene to late Early Miocene. The rapid increase of deposition base-level caused by the collision is clearly reflected by the architecture of the Mukah coal seams that were generally thin, and also by the reverse order of the paleo-peat bodies.

  5. Ecological differentiation, lack of hybrids involving diploids, and asymmetric gene flow between polyploids in narrow contact zones of Senecio carniolicus (syn. Jacobaea carniolica, Asteraceae)

    Czech Academy of Sciences Publication Activity Database

    Hülber, K.; Sonnleitner, M.; Suda, Jan; Krejčíková, J.; Schönswetter, P.; Schneeweiss, G. M.; Winkler, M.

    2015-01-01

    Roč. 5, č. 6 (2015), s. 1224-1234 ISSN 2045-7758 R&D Projects: GA ČR GB14-36079G Institutional support: RVO:67985939 Keywords : gene flow * hybridization * polyploidy Subject RIV: EF - Botanics Impact factor: 2.537, year: 2015

  6. Constituents of the arial parts of Eupatorium odoratum L. ( Syn. Chromolaena odorata) (L.) R.M. King And H Robinson), family compositae-grown in Vietnam

    NARCIS (Netherlands)

    Trang, N.T.D.; Phuong, L.V.N.; Dung, N.X.; Leclercq, P.A.; Wanner, M.J.; Koomen, C.J.; Fokkens, R.

    1994-01-01

    Eupatorium odoratum (L.), Family Compositae grows very fast in various places of the world, especially in tropical countries. This plant belonges to one of the worst plants. Some applications of this plant used for treatment of diseases such as disrrhoea, dysentery and scabies have been found in

  7. Proffs eller nördar : En kvalitativ studie om samhällets syn på e-sport

    OpenAIRE

    Edqvist, Patrick

    2013-01-01

    Despite the vast research on the effects of gaming, little is know how the phenomenon of e-sports and it’s followers is portrayed. While media can have significant impact on what and how e-sport is portrayed, no studies have been done in a Swedish context. This thesis aims at filling that gap with investigations of the two major Swedish newspapers. Six articles was analyzed with critical discourse analysis with a theoretical base of journalism.The result of which indicated that between the pe...

  8. Historia är bäst på bio : Lärares syn på spelfilm som pedagogiskt redskap

    OpenAIRE

    Waller, Jennie

    2012-01-01

    This essay investigates how teacher sees and uses mainstream movies as a teaching method. The main question approached is: How does teachers use feature films as a teaching method? Which movies are used and how does their working methods surrounding the movies look like? The purpose of the essay is to make the reader reflect over what influence mainstream media has over the historic knowledge of the students and how teachers use that for educational purposes. The business around historical fi...

  9. Draft genome sequence of the yeast Starmerella bacillaris (syn., Candida zemplinina) FRI751 isolated from fermenting must of dried Raboso grapes

    DEFF Research Database (Denmark)

    Lemos Junior, Wilson Jose Fernandes; Treu, Laura; da Silva Duarte, Vinicius

    2017-01-01

    Starmerella bacillaris is an ascomycetous yeast commonly present in enological environments. Here, we report the first draft genome sequence of S. bacillaris FRI751, which will facilitate the study of the characteristics of this interesting enological yeast.......Starmerella bacillaris is an ascomycetous yeast commonly present in enological environments. Here, we report the first draft genome sequence of S. bacillaris FRI751, which will facilitate the study of the characteristics of this interesting enological yeast....

  10. Musik som ett specialpedagogiskt verktyg för barns språkutveckling : Fem sydafrikanska pedagogers syn på musik som pedagogiskt verktyg

    OpenAIRE

    Johansson, Lina

    2014-01-01

    The purpose of this essay is to study if and how five South African educators work with music as a special pedagogical tool in children's language development. To achieve the purpose of this study, two research questions were created. As method, interviews of a qualitative character were chosen.  The aim of the method is to give the educators the opportunity to think about and use their own experience before answering the questions. The result shows that the South African educators are not us...

  11. 3,6-Bis(2-pyrazinyl)-1,2,4,5-tetrazin: Ein neuer mehrfunktioneller Ligand und sein syn,fac-konfigurierter Bis(tricarbonylchlororhenium)-Komplex

    Czech Academy of Sciences Publication Activity Database

    Sarkar, B.; Kaim, W.; Schleid, T.; Hartenbach, I.; Fiedler, Jan

    2003-01-01

    Roč. 629, - (2003), s. 1353-1357 ISSN 0044-2313 R&D Projects: GA MŠk OC D14.20; GA MŠk OC D15.10 Institutional research plan: CEZ:AV0Z4040901 Keywords : carbonyl ligands * heterocyclic ligands * rhenium Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 1.127, year: 2003

  12. Myrcia splendens (Sw. DC. (syn. M. fallax (Rich. DC. (Myrtaceae Essential Oil from Amazonian Ecuador: A Chemical Characterization and Bioactivity Profile

    Directory of Open Access Journals (Sweden)

    Laura Scalvenzi

    2017-07-01

    Full Text Available In this study, we performed the chemical characterization of Myrcia splendens (Sw. DC. (Myrtaceae essential oil from Amazonian Ecuador and the assessment of its bioactivity in terms of cytotoxic, antibacterial, and antioxidant activity as starting point for possible applicative uses. M. splendens essential oil, obtained by hydro-distillation, was analyzed by Gas Chromatography-Mass Spectrometry (GC-MS and Gas Chromatography-Flame Ionization Detector (GC-FID: the major components were found to be trans-nerolidol (67.81% and α-bisabolol (17.51%. Furthermore, we assessed the cytotoxic activity against MCF-7 (breast, A549 (lung human tumor cell lines, and HaCaT (human keratinocytes non-tumor cell line through 3-(4,5-dimethyl-2-thiazolyl-2,5-diphenyl-2-H-tetrazolium bromide (MTT test: promising results in terms of selectivity and efficacy against the MCF-7 cell line (IC50 of 5.59 ± 0.13 μg/mL at 48 h were obtained, mainly due to α-bisabolol. Furthermore, antibacterial activity against Gram positive and negative bacteria were performed through High Performance Thin Layer Chromatography (HPTLC bioautographic assay and microdilution method: trans-nerolidol and β-cedren-9-one were the main molecules responsible for the low antibacterial effects against human pathogens. Nevertheless, interesting values of Minimum Inhibitory Concentration (MIC were noticeable against phytopathogen strains. Radical scavenging activity performed by HPTLC bioautographic and spectrophotometric 1,1-diphenyl-2-picrylhydrazyl (DPPH approaches were negligible. In conclusion, the essential oil revealed a good potential for plant defense and anti-cancer applications.

  13. The Hypocrea jecorina (syn. Trichoderma reesei) lxr1 gene encodes a D-mannitol dehydrogenase and is not involved in L-arabinose catabolism

    NARCIS (Netherlands)

    Metz, Benjamin; de Vries, Ronald P; Polak, Stefan; Seidl, Verena; Seiboth, Bernhard

    2009-01-01

    The Hypocrea jecorina LXR1 was described as the first fungal L-xylulose reductase responsible for NADPH dependent reduction of L-xylulose to xylitol in L-arabinose catabolism. Phylogenetic analysis now reveals that LXR1 forms a clade with fungal D-mannitol 2-dehydrogenases. Lxr1 and the orthologous

  14. An assessment of Osmia rufa (syn. bicornis) as a pollinator of the sour cherry (Prunus cerasus) cv. Stevnsbaer in eastern Denmark

    DEFF Research Database (Denmark)

    Hansted, Lise; Grout, Brian William Wilson; Toldam-Andersen, Torben Bo

    2014-01-01

    . The remaining 8 pollen types were from entomophilous plants. Based on the results it is estimated that a mean of 220,000 O. rufa cocoons would be needed per hectare if the species were to be an effective, supplementary pollinator of P. cerasus cv. Stevnsbaer. Practical, economic and environmental considerations...... investigates the activity and food preferences of this species during flowering of sour cherry (P. cerasus cv. Stevnsbaer). Female O. rufa provisioned a mean of 2.96 ± 1.44 cells each with 6.24 ± 1.46 pollen types during the receptive period of flowering . In all 17 different pollen types were collected...... of which the most dominant were Salix (41.4% ± 9.34%) and Acer (33.24% ± 8.81%), followed by Betula (8.16% ± 5.08%), P. cerasus (8.16% ± 1.79%) and Fagus (3.56% ± 1.96%). P. cerasus was present in all samples. Nine pollen types were from anemophilous plants and represented 87.94% of the pollen collected...

  15. THE BRECCE DELLA RENGA FORMATION: AGE AND SEDIMENTOLOGY OF A SYN-TECTONIC CLASTIC UNIT IN THE UPPER MIOCENE OF CENTRAL APENNINES. INSIGHTS FROM FIELD GEOLOGY

    Directory of Open Access Journals (Sweden)

    SIMONE FABBI

    2014-07-01

    Full Text Available In the NE Simbruini Mountains, the “Brecce della Renga Fm.” is a clastic unit documenting sedimentation controlled by late Miocene extensional tectonics.The unit has been subdivided into three lithofacies and six sublithofacies, based on the arenite/rudite/pelite ratio. Massive and coarser (up to megablock size intervals are interpreted as rockfall deposits (likely induced by earthquakes at the toe of steep submarine escarpments. By contrast, finer levels are interpreted as having been sedimented through avalanching and turbidity flows in more distal settings, and are partly lateral to basinal hemipelagites and siliciclastic turbidites. Pelite lenses, found at various stratigraphic levels, are the result of ponded sedimentation along the clastic margin. Calcareous nannofossils analyses have been performed for age determinations on 60 fossiliferous samples, which were collected in each sublithofacies of the “Brecce della Renga Fm.”. The unit ranges from early Tortonian (MNN8b to early Messinian (MNN11c. The age and field geometries of the older breccias document the existence of a Tortonian extensional phase, which predated the late Messinian thrusting. A progradation of the clastic wedge can be observed in the Tortonian, while Messinian deposits show a fining upwards trend. The distribution curve of clastics over time can, given the number of synsedimentary faults mapped in the area, be put in relation with the seismicity induced by the activity along such faults, which after reaching an acme in the Tortonian gradually reached a quiescent state in the early Messinian, causing the backstepping of clastic facies.

  16. Geochronology, petrogenesis and tectonic settings of pre- and syn-ore granites from the W-Mo deposits (East Kounrad, Zhanet and Akshatau), Central Kazakhstan

    Science.gov (United States)

    Li, GuangMing; Cao, MingJian; Qin, KeZhang; Evans, Noreen J.; Hollings, Pete; Seitmuratova, Eleonora Yusupovha

    2016-05-01

    There is significant debate regarding the mineralization ages of the East Kounrad, Zhanet and Akshatau W-Mo deposits of Central Kazakhstan, and the petrogenesis and tectono-magmatic evolution of the granites associated with these deposits. To address these issues, we present molybdenite Re-Os dating, zircon U-Pb dating, whole rock geochemistry as well as Sr-Nd-Pb and zircon O-Hf isotopic analyses on the pre-mineralization and ore-forming granites. U-Pb dating of zircons from pre-mineralization granitic rocks yield Late Carboniferous ages of 320-309 Ma, whereas ore-forming granites have Early Permian ages of 298-285 Ma. Molybdenite Re-Os isotopic data indicate a mineralization age of 296 Ma at East Kounrad, 294 Ma at Akshatau and 285 Ma at Zhanet. The pre-ore and ore-forming granites are high-K calc-alkaline, metaluminous to slightly peraluminous I-type granites. The pre-mineralization granites are relatively unfractionated, whereas the ore-forming granites are highly fractionated. The fractionating mineral phases are probably K-feldspar, apatite, Ti-bearing phases and minor plagioclase. The pre-mineralization and ore-forming rocks are characterized by similar Sr-Nd-Pb-Hf-O isotopic compositions ((87Sr/86Sr)i = 0.70308-0.70501, εNd (t) = - 0.5 to + 2.8, 207Pb/204Pb = 15.60-15.82, zircon εHf (t) = + 1.2 to + 15.6 and δ18O = + 4.6 to + 10.3‰), whole rock TDMC (Nd) (840-1120 Ma) and zircon TDMC (Hf) (320-1240 Ma). The isotopic characteristics are consistent with a hybrid magma source caused by 10-30% assimilation of ancient crust by juvenile lower crust. The geochronology and geochemistry of these granites show that the Late Carboniferous pre-mineralization granitic rocks formed during subduction, whereas the Early Permian ore-forming, highly fractionated granite probably underwent significant fractionation with a restite assemblage of K-feldspar, apatite, Ti-bearing phases and minor plagioclase and developed during collision between the Yili and Kazakhstan terranes commenced at the latest Late Carboniferous.

  17. South African report of first case of chromoblastomycosis caused by Cladosporium (syn Cladophialophora) carrionii infection in a cat with feline immunodeficiency virus and lymphosarcoma.

    Science.gov (United States)

    Zambelli, Anthony B; Griffiths, Catherine A

    2015-04-01

    This report describes a 6-year-old neutered male feline immunodeficiency-positive cat with repeated abdominal and thoracic effusions. The cat was diagnosed with and treated for lymphosarcoma but remission was short-lived and, on re-evaluation, a fungal peritoneal exudate was noted. Cytology of the organisms is described and the culture elucidated Cladosporium carrionii, an important cause of chromoblastomycosis. Treatment with itraconazole was unsuccessful in this case. © ISFM and AAFP 2014.

  18. Magnetic fabrics of the syn to post orogenic granite suites of the Brusque metamorphic complex (Dom Feliciano Belt, Santa Catarina, Brasil

    International Nuclear Information System (INIS)

    Steenken, A; Basei, M.; Lopez de Luchi, M.

    2007-01-01

    The Dom Feliciano belt in southern Brazil and Uruguay has accommodated the collision between the cratons of Kalahari and Congo versus the Luis Alves microplate as a fragment of the Rio de La Plata craton during the Rio Doce orogeny in the late Neoproterozoic. The Sierra Ballena - Major Gercino shear zone was interpreted as the suture between the cratons. In the state of Santa Catarina three suites of highly evolved granites intruded the Brusque metamorphic complex in the northwest of the Major Gercino shear zone. Magmatic contacts between the different suites denote to their close temporal intrusion sequence. Shear zone activity is documented by local low temperature brittle deformation of the intrusive suites. Fabrics of the granites were obtained by the measurement of the anisotropy of the magnetic susceptibility (AMS). Low bulk susceptibilities (Kvol -6 SI) and a low degree of the total anisotropy (P' < 1.07) suggest a paramagnetic origin of the magnetic fabrics that may be directly correlated with the macroscopic rock fabric. Planar fabrics form a dome-like foliation pattern for the main Valsungana intrusion occupying the southwestern part of the NE-SW elongated intrusion. Linear fabrics show a weakly defined ENE-WSW trend parallel to the late stage transcurrent extension of the basement. It is suggested that a number of dome-like intrusions that follow the trend of the Major Gercino shear zone in the northwest were emplaced and subsequently amalgamated in the course of magma ascent leading to present outcrop shape of the intrusive complex

  19. Temporal constraints on the kinematics of the destabilization of an orogen : syn- to post-orogenic extensional collapse of the Northern Aegean region

    NARCIS (Netherlands)

    Lips, A.L.W.

    1998-01-01

    The Mediterranean region is situated at the interface of the African and Eurasian plates and has been shaped by the Alpine Orogeny and the subsequent post-orogenic extension during the convergence and collision of the African and Eurasian plates. Numerous tectonic studies have focussed on the role

  20. Temporal constraints on the kinematics of the destabilization of an orogen : syn- to post-orogenic extensional collapse of the Northern Aegean region

    NARCIS (Netherlands)

    Lips, A.L.W.

    1998-01-01

    The Mediterranean region is situated at the interface of the African and Eurasian plates and has been shaped by the Alpine Orogeny and the subsequent post-orogenic extension during the convergence and collision of the African and Eurasian plates. Numerous tectonic studies have focussed on the

  1. Design of a syndemic based intervention to facilitate care for men who have sex with men with high risk behaviour: the syn.bas.in randomized controlled trial

    NARCIS (Netherlands)

    Achterbergh, Roel C. A.; van der Helm, Jannie J.; van den Brink, Wim; de Vries, Henry J. C.

    2017-01-01

    Men who have sex with men (MSM) constitute a risk group for sexual transmitted infections (STIs), including HIV. Despite counselling interventions, risk behaviour remains high. Syndemic theory holds that psychosocial problems often co-occur, interact and mutually reinforce each other, thereby

  2. Ledarskap inom äldreomsorgen : En kvalitativ studie om chefernas syn på motivation till sina medarbetare och hur dessa ledarkunskaper förvärvas

    OpenAIRE

    Eriksson, Linda; Örnfjärd, Viveka

    2013-01-01

    The purpose of this essay was to explore how the first-line managers in eldercare motivate their employees. In addition, we intend to study how the first-line managers acquire their leadership skills. To find answers to this purpose, we asked ourselves the questions; how acquires first line managers knowledge of how to motivate their employees? What is the first-line manager’s perception of motivation against their employees? The method we used was qualitative interviews with eight first-line...

  3. Integrating multidisciplinary science, modelling and impact data into evolving, syn-event volcanic hazard mapping and communication: A case study from the 2012 Tongariro eruption crisis, New Zealand

    Science.gov (United States)

    Leonard, Graham S.; Stewart, Carol; Wilson, Thomas M.; Procter, Jonathan N.; Scott, Bradley J.; Keys, Harry J.; Jolly, Gill E.; Wardman, Johnny B.; Cronin, Shane J.; McBride, Sara K.

    2014-10-01

    New Zealand's Tongariro National Park volcanoes produce hazardous eruptions every few years to decades. On 6 August 2012 the Te Maari vent of Tongariro Volcano erupted, producing a series of explosions and a fine ash of minor volume which was dispersed rapidly to the east. This manuscript presents a summary of the eruption impacts and the way these supported science communication during the crisis, particularly in terms of hazard map development. The most significant proximal impact was damage from pyroclastic surges and ballistics to the popular and economically-important Tongariro Alpine Crossing track. The only hazard to affect the medial impact zone was a few mms of ashfall with minor impacts. Field testing indicated that the Te Maari ash had extremely low resistivity when wetted, implying a very high potential to cause disruption to nationally-important power transmission networks via the mechanism of insulator flashover. This was not observed, presumably due to insufficient ash accumulation on insulators. Virtually no impacts from distal ashfall were reported. Post-event analysis of PM10 data demonstrates the additional value of regional air quality monitoring networks in quantifying population exposure to airborne respirable ash. While the eruption was minor, it generated a high level of public interest and a demand for information on volcanic hazards and impacts from emergency managers, the public, critical infrastructure managers, health officials, and the agriculture sector. Meeting this demand fully taxed available resources. We present here aspects of the New Zealand experience which may have wider applicability in moving towards improved integration of hazard impact information, mapping, and communication. These include wide use of a wiki technical clearinghouse and email listservs, a focus on multi-agency consistent messages, and a recently developed environment of collaboration and alignment of both research funding and technical science advice. Hazard maps were integral to science communication during the crisis, but there is limited international best practice information available on hazard maps as communication devices, as most volcanic hazard mapping literature is concerned with defining hazard zones. We propose that hazard maps are only as good as the communications framework and inter-agency relationships in which they are embedded, and we document in detail the crisis hazard map development process. We distinguish crisis hazard maps from background hazard maps and ashfall prediction maps, illustrating the complementary nature of these three distinct communication mechanisms. We highlight issues that arose and implications for the development of future maps.

  4. Description and experimental transmission of Tetracapsuloides vermiformis n. sp (Cnidaria: Myxozoa) and guidelines for describing malacosporean species including reinstatement of Buddenbrockia bryozoides n. comb. (syn. Tetracapsula bryozoides)

    Czech Academy of Sciences Publication Activity Database

    Patra, Sneha; Hartigan, Ashlie; Morris, D.J.; Kodádková, Alena; Holzer, Astrid S.

    2017-01-01

    Roč. 144, č. 4 (2017), s. 497-511 ISSN 0031-1820 R&D Projects: GA ČR(CZ) GBP505/12/G112 Institutional support: RVO:60077344 Keywords : Buddenbrockia bryozoides n. comb. * Buddenbrockia plumatellae * Malacosporea * morphological variation * Myxozoa * species discrimination * taxonomy * Tetracapsuloides vermiformis n. sp. Subject RIV: EG - Zoology OBOR OECD: Zoology Impact factor: 2.713, year: 2016

  5. Playtime! : en studie av lärares syn på film som pedagogiskt hjälpmedel i historieämnet på gymnasiet

    OpenAIRE

    Hultkrantz, Catharina

    2014-01-01

    Showing movies to pupils is hardly a new, innovative teaching method. However, knowledge about how film is used and why, as well as what kind of film is used is scarce. In the present licentiate thesis, eight active teachers have been interviewed on their experiences with and approached to using film as a pedagogic tool in high school history lessons. The purpose of the study is to analyze the respective teachers´ use and understanding of history, based on their opinion of film as a didactic ...

  6. Immobilisation and characterisation of biocatalytic co-factor recycling enzymes, glucose dehydrogenase and NADH oxidase, on aldehyde functional ReSynTM polymer microspheres

    CSIR Research Space (South Africa)

    Twala, BV

    2012-03-01

    Full Text Available The use of enzymes in industrial applications is limited by their instability, cost and difficulty in their recovery and re-use. Immobilisation is a technique which has been shown to alleviate these limitations in biocatalysis. Here we describe...

  7. Geografilärares och niondeklassares syn på undervisningen om klimatförändringenClimate change education: Geography teachers’ and ninth-graders’ views

    Directory of Open Access Journals (Sweden)

    Mikaela Hermans

    2014-10-01

    Full Text Available It has been increasingly recognised that education plays a key role in addressing human-induced climate change. The ultimate goal of climate change education (CCE is positive impacts on the climate through both individual and collective actions. The aim of this study is to investigate geography teachers’ and their ninth-graders’ views about CCE. Data was collected using semi-structured interviews with geography teachers (N = 13 and questionnaires for ninth-graders (N = 549 at eleven secondary schools from all parts of Swedish-speaking Finland. The results show that although the students’ attitudes to CCE is positive, it does not supply them with action competence. The geography teachers in this study largely miss the ultimate goal of CCE, pointing at the need for more effort to be made in the process of developing CCE at secondary school.

  8. Análisis del comportamiento de la demanda de importaciones de limón persa (Citrus latifolia tanaka) y mexicano (Citrus aurantifolia swingle) en los Estados Unidos

    OpenAIRE

    Sánchez Torres, Yolanda

    2011-01-01

    La agricultura mexicana en la década de los setentas inicia un proceso de expansión en la producción de frutas y hortalizas; y con ello la relevancia de frutas de clima tropical en el mercado mundial. Para 2008 México ocupaba el segundo lugar como productor mundial (14.94%) de limones y el primero como exportador (20.5%), teniendo dos variedades altamente competitivas: el limón mexicano, orientado al mercado nacional (96.2%) y el limón persa vinculado al mercado internacional (50.3%). El obj...

  9. ESTIMACIÓN DE LA DEMANDA DE IMPORTACIONES DE LIMÓN PERSA (Citrus latifolia tanaka EN ESTADOS UNIDOS PROCEDENTES DE MÉXICO (1994-2008

    Directory of Open Access Journals (Sweden)

    Yolanda Sanchez Torres

    2011-07-01

    Full Text Available En 2008, México figuraba como el segundo productor mundial (14.94% de limones y el primero como exportador (20.5%, principalmente de limón persa, por lo que el objetivo de la investigación fue identificar y valorar aquellos factores que determinan la demanda de importaciones de limón persa en Estados Unidos, principal mercado destino (94.7%. Bajo el supuesto de que dicho mercado ofrece una capacidad real de expansión para los productores mexicanos de este cultivo, se formuló un modelo de regresión múltiple, considerando el ingreso, tipo de cambio (peso/dólar, precio unitario de importación y la demanda de importaciones,  estimado por el método de Mínimos Cuadrados Ordinarios (MCO; con datos anuales del  periodo 1994-2008, obteniendo también las elasticidades de la demanda. La variable de mayor  respuesta fue el ingreso con una elasticidad de  3.8, clasificando al limón persa como un bien normal superior; seguido del tipo de cambio  (0.83 y el precio (-0.666. Se concluyó, que es factible mantener el nivel de crecimiento actual de demanda de importaciones de limón persa, del 9.3% promedio anual, debido a que el incremento requerido en el ingreso real de Estados Unidos sería del 2.45% (ceteris paribus, contra el crecimiento observado del 2.9% en el periodo de estudio.

  10. Use of liquid chromatography/electrospray ionization tandem mass spectrometry to study the degradation pathways of terbuthylazine (TER) by Typha latifolia in constructed wetlands: identification of a new TER metabolite.

    Science.gov (United States)

    Gikas, Evagelos; Papadopoulos, Nikolaos G; Bazoti, Fotini N; Zalidis, Georgios; Tsarbopoulos, Anthony

    2012-01-30

    S-Triazines are used worldwide as herbicides for agricultural and non-agricultural purposes. Although terbuthylazine (TER) is the second most frequently used S-triazine, there is limited information on its metabolism. For this reason, an analytical method based on liquid chromatography/electrospray ionization tandem mass spectrometry (LC-ESI MS/MS) has been developed aiming at the identification of TER and its five major metabolites (desisopropyl-hydroxy-atrazine, desethyl-hydroxy-terbuthylazine, desisopropyl-atrazine, hydroxy-terbuthylazine and desethyl-terbuthylazine) in constructed wetland water samples. The separation of TER and its major metabolites was performed by reversed-phase high-performance liquid chromatography (HPLC) on a C(8) column using a gradient elution of aqueous acetic acid 1% (solvent A) and acetonitrile (solvent B), followed by MS/MS analysis on a triple quadrupole mass spectrometer. The data-depended analysis (DDA) scan approach has been employed and the main degradation pathways of both hydroxyl and chloro (dealkylated and alkylated) metabolites are elucidated through the tandem mass spectral (MS/MS) interpretation of triazine fragments under CID conditions. In addition, another major metabolite of TER, namely N2-tert-butyl-N4-ethyl-6-methoxy-1,3,5-triazine-2,4-diamine, has been identified. This methodology can be further employed in biodegradation studies of TER, thus assisting the assessment of its environmental impact. Copyright © 2011 John Wiley & Sons, Ltd.

  11. Chemical communication in termites: syn-4,6-dimethylundecan-1-ol as trail-following pheromone, syn-4,6-dimethylundecanal and (5E)-2,6,10-trimethylundeca-5,9-dienal as the respective male and female sex pheromones in Hodotermopsis sjoestedti (Isoptera, Archotermopsidae)

    Czech Academy of Sciences Publication Activity Database

    Lacey, M. J.; Sémon, E.; Krasulová, Jana; Sillam-Dusses, David; Robert, A.; Cornette, R.; Hoskovec, Michal; Žáček, Petr; Valterová, Irena; Bordereau, Ch.

    2011-01-01

    Roč. 57, č. 12 (2011), s. 1585-1591 ISSN 0022-1910 Institutional research plan: CEZ:AV0Z40550506 Keywords : sex-specific pheromone s * basal termites * classification * phylogenetic relationships * zootermopsis Subject RIV: CC - Organic Chemistry Impact factor: 2.236, year: 2011

  12. 7 CFR 301.32-2 - Regulated articles.

    Science.gov (United States)

    2010-01-01

    ... jambhiri Lemon, Rough Mediterranean. Citrus latifolia Lime, Persian Oriental. Citrus limon Lemon..., Oriental. Citrus reticulata x C. sinensis = Citrus nobilis Orange, king Mediterranean, Melon, Oriental...

  13. Phytochemical profiles and antioxidant potential of four Arctic vascular plants from Svalbard

    Digital Repository Service at National Institute of Oceanography (India)

    Singh, P.; Singh, S.M.; DeSouza, L.; Wahidullah, S.

    the chemical composition and antioxidative activities of four Arctic flowering plant species (Dryas octopetala, Carex rupestris, Silene uralensis and Deschampsia alpina.) through in vitro measurements of the free radical scavenging activities (FRS), inhibition...

  14. Notas sinonímicas em Lepturini sul-americanos (Coleoptera, Cerambycidae, Lepturinae Synonymical notes on South American Lepturini (Coleoptera, Cerambycidae, Lepturinae

    Directory of Open Access Journals (Sweden)

    Miguel A. Monné

    2004-12-01

    Full Text Available Novas sinonímias propostas: Strangalia flavocincta (Thomson, 1860 = Ophistomis tristis Melzer, 1922 syn. nov. = O. latifasciata Melzer, 1926 syn. nov.; Strangalia succincta (Redtenbacher, 1867 = O. auriflua Redtenbacher, 1867 syn. nov.; Strangalia melanura (Redtenbacher, 1867 = Euryptera dimidiata Redtenbacher, 1867 syn. nov.; Strangalia lyrata (Redtenbacher, 1867 = Ophistomis discophora Redtenbacher, 1867 syn. nov.; Strangalia fulvicornis (Bates, 1872 = Ophistomis variabilis Melzer, 1926 syn. nov. = O. flavovittata Melzer, 1926 syn. nov.; Strangalia melanophthisis (Berg, 1889 reval. = Euryptera melanura var. nigripennis Melzer, 1930 syn. nov.; Anastrangalia sanguinolenta (Linnaeus, 1761 (espécie introduzida na Argentina = Leptura bonaeriensis Burmeister, 1865 syn. nov.New synonyms proposed: Strangalia flavocincta (Thomson, 1860 = Ophistomis tristis Melzer, 1922 syn. nov. = O. latifasciata Melzer, 1926 syn. nov.; Strangalia succincta (Redtenbacher, 1867 = O. auriflua Redtenbacher, 1867 syn. nov.; Strangalia melanura (Redtenbacher, 1867 = Euryptera dimidiata Redtenbacher, 1867 syn. nov.; Strangalia lyrata (Redtenbacher, 1867 = Ophistomis discophora Redtenbacher, 1867 syn. nov.; Strangalia fulvicornis (Bates, 1872 = Ophistomis variabilis Melzer, 1926 syn. nov. = O. flavovittata Melzer, 1926 syn. nov.; Strangalia melanophthisis (Berg, 1889 reval. = Euryptera melanura var. nigripennis Melzer, 1930 syn. nov.; Anastrangalia sanguinolenta (Linnaeus, 1761 (species introduced in Argentina = Leptura bonaeriensis Burmeister, 1865 syn. nov.

  15. The genera of Nematinae (Hymenoptera, Tenthredinidae

    Directory of Open Access Journals (Sweden)

    Marko Prous

    2014-10-01

    Full Text Available Recent phylogenetic studies on Nematinae based on DNA sequences have shown extensive incongruencies with current nomenclature of genus-group taxa. Here, we expand previous DNA sequence datasets based on three genes (CoI, Cytb, and EF-1α, to include a fourth (NaK and more genera. The analyses largely confirm the previous findings, particularly the existence of two well-supported large clades, Euura and Pristiphora, together comprising more than 75% of the species of Nematinae. Basal relationships within these two clades remain poorly resolved, mirroring the difficulties in delimiting genera based on morphology. In addition, a moderately supported small clade, Nematus, is found. The relationships between the Euura, Pristiphora, and Nematus clades are uncertain. Therefore, to stabilize the nomenclature we treat these clades as genera. This taxonomic treatment results in numerous new combinations of species names. The following synonymies are proposed for the available genus-group names. Synonyms of Euura Newman, 1837: Cryptocampus Hartig, 1837, Euura Agassiz, 1848, Pontania Costa, 1852, syn. n., Epitactus Förster, 1854, syn. n., Amauronematus Konow, 1890, syn. n., Holcocneme Konow, 1890, syn. n., Pachynematus Konow, 1890, syn. n., Holcocnema Schulz, 1906, syn. n., Holcocnemis Konow, 1907, syn. n., Pteronidea Rohwer, 1911, syn. n., Pontopristia Malaise, 1921, syn. n., Brachycoluma Strand, 1929, syn. n., Decanematus Malaise, 1931, syn. n., Pikonema Ross, 1937, syn. n., Phyllocolpa Benson, 1960, syn. n., Eitelius Kontuniemi, 1966, syn. n., Gemmura E.L. Smith, 1968, Eupontania Zinovjev, 1985, syn. n., Larinematus Zhelochovtsev, 1988, syn. n., Polynematus Zhelochovtsev, 1988, syn. n., Bacconematus Zhelochovtsev, 1988, syn. n., Alpinematus Lacourt, 1996, syn. n., Epicenematus Lacourt, 1998, syn. n., Kontuniemiana Lacourt, 1998, syn. n., Lindqvistia Lacourt, 1998, syn. n., Luea Wei and Nie, 1998, syn. n., and Tubpontania Vikberg, 2010, syn. n. Synonyms

  16. Download this PDF file

    African Journals Online (AJOL)

    observed in strychnine poisoning and death. Pentobarbital induced sleep in rats. The methanolic extract of N. Latifolia root bark did not influence the duration of sleep following pentobarbital administration in rats at the dose range of 50-200 mg/kg (Table 1). Table 1: The effects of the methanolic extract of N. latifolia root bark ...

  17. Identification of Races 0 and 2 of Cladosporium fulvum (syn Passalora fulva) on Tomato in the Cinturón Hortícola de La Plata, Argentina

    OpenAIRE

    Rollán, María Cristina; Protto, Victoria; Medina, Rocío; López, Silvina Marianela Yanil; Vera Bahima, José; Ronco, Blanca Lía; Saparrat, Mario Carlos Nazareno; Balatti, Pedro Alberto

    2013-01-01

    Surveys aimed at evaluating the incidence and severity of a new disease that developed in greenhouses cultivated with tomato (Solanum lycopersicum L.) were performed during 2009 and 2010 in greenhouses of the cultivars Elpida (Enza Zaden) and Colibrí (Clause) in an area of tomato production known as the Cinturón Hortícola de La Plata (the “horticultural belt of La Plata”). The disease had a 100% prevalence and 90% incidence within the ten 250 m greenhouses that were monitored in 2009, 2010, a...

  18. ”På Facebook slipper man vara närvarande” : En studie kring unga vuxnas syn på användande, identitetsskapande och kvarlämnade digitala identiteter på Facebook

    OpenAIRE

    Michael, Carlsson; Lahdensuo, Jonna

    2009-01-01

    Bakgrund: Facebook är ett socialt onlinenätverk som under sina levnadsår har ökat explosionsartat i popularitet. På Facebook sköter många användare stora delar av sina sociala relationer och delar med sig mycket av sig själva. Det finns inget tidigare socialt nätverk i stil med Facebook som har haft samma genomslagskraft hos internetanvändarna. I användandet skapas en digital identitet som lämnar spår på Facebook, även om en användare är död. Kring dessa kvalämnade digitala identiteter vill v...

  19. Crustal melting and recycling: geochronology and sources of Variscan syn-kinematic anatectic granitoids of the Tormes Dome (Central Iberian Zone). A U-Pb LA-ICP-MS study

    Science.gov (United States)

    López-Moro, F. J.; López-Plaza, M.; Gutiérrez-Alonso, G.; Fernández-Suárez, J.; López-Carmona, A.; Hofmann, M.; Romer, R. L.

    2018-04-01

    In this study, we report U-Pb Laser Ablation ICP-MS zircon and ID-TIMS monazite ages for peraluminous granitoid plutons (biotite ± muscovite ± cordierite ± sillimanite) in the Tormes Dome, one of the gneiss-cored domes located in the Central Iberian Zone of the Variscan belt of northern Spain. Textural domains in zircon, interpreted to represent the magmatic crystallization of the granitoids (and one monazite fraction in the Ledesma pluton) yielded ages around 320 Ma, in agreement with other geochronological studies in the region. This age is interpreted to date the timing of decompression crustal melting driven by the extensional collapse of the orogenic belt in this domain of the Variscan chain of western Europe. In addition, there are several populations of inherited (xenocrystic) zircon: (1) Carboniferous zircon crystals (ca. 345 Ma) as well as one of the monazite fractions in the coarse-grained facies of the Ledesma pluton that also yielded an age of ca. 343 Ma. (2) Devonian-Silurian zircon xenocrysts with scattered ages between ca. 390 and 432 Ma. (3) Middle Cambrian-Ordovician (ca. 450-511 Ma). (4) Ediacaran-Cryogenian zircon ages (ca. 540-840 Ma). (5) Mesoproterozoic to Archaean zircon (900-2700 Ma). The abundance of Carboniferous-inherited zircon shows that crustal recycling/cannibalization may often happen at a fast pace in orogenic scenarios with only short lapses of quiescence. In our case study, it seems plausible that a "crustal layer" of ca. 340 Ma granitoids/migmatites was recycled, partially or totally, only 15-20 My after its emplacement.

  20. A blood-brain barrier (BBB) disrupter is also a potent α-synuclein (α-syn) aggregation inhibitor: a novel dual mechanism of mannitol for the treatment of Parkinson disease (PD).

    Science.gov (United States)

    Shaltiel-Karyo, Ronit; Frenkel-Pinter, Moran; Rockenstein, Edward; Patrick, Christina; Levy-Sakin, Michal; Schiller, Abigail; Egoz-Matia, Nirit; Masliah, Eliezer; Segal, Daniel; Gazit, Ehud

    2013-06-14

    The development of disease-modifying therapy for Parkinson disease has been a main drug development challenge, including the need to deliver the therapeutic agents to the brain. Here, we examined the ability of mannitol to interfere with the aggregation process of α-synuclein in vitro and in vivo in addition to its blood-brain barrier-disrupting properties. Using in vitro studies, we demonstrated the effect of mannitol on α-synuclein aggregation. Although low concentration of mannitol inhibited the formation of fibrils, high concentration significantly decreased the formation of tetramers and high molecular weight oligomers and shifted the secondary structure of α-synuclein from α-helical to a different structure, suggesting alternative potential pathways for aggregation. When administered to a Parkinson Drosophila model, mannitol dramatically corrected its behavioral defects and reduced the amount of α-synuclein aggregates in the brains of treated flies. In the mThy1-human α-synuclein transgenic mouse model, a decrease in α-synuclein accumulation was detected in several brain regions following treatment, suggesting that mannitol promotes α-synuclein clearance in the cell bodies. It appears that mannitol has a general neuroprotective effect in the transgenic treated mice, which includes the dopaminergic system. We therefore suggest mannitol as a basis for a dual mechanism therapeutic agent for the treatment of Parkinson disease.

  1. Use of spent mushroom substrates from Agaricus subrufescens (syn. A. blazei, A. brasiliensis) and Lentinula edodes productions in the enrichment of a soil-based potting media for lettuce (Lactuca sativa) cultivation: Growth promotion and soil bioremediation.

    Science.gov (United States)

    Ribas, L C C; de Mendonça, M M; Camelini, C M; Soares, C H L

    2009-10-01

    This study aimed to assess physicochemical and microbiological properties of fresh spent mushroom substrates (SMSs)--without post-crop heat treatment--from Agaricus subrufescens and Lentinula edodes production to optimize the use of these residues in the soil enrichment for lettuce growth promotion and soil remediation. Organic matter and C content of both SMSs were high. Fresh A. subrufescens SMS was a good source of N, P and K. On the other hand, L. edodes SMS presented a lower concentration of these nutrients and a high level of immaturity. Both SMSs presented high electric conductivity values (2.5-3.4 mS/cm). Microbiological analysis, based upon enumeration of culturable bacteria (thermophilic and mesophilic) and fungi, and also evolution of CO(2), showed that SMSs played higher microbial diversity than soil control. Laccase activity from A. subrufescens SMS tended to remain constant during a 2-month period, while L. edodes SMS presented low laccase activity throughout the same period. Agaricus subrufescens and L. edodes were able to grow on a PDA (Potato Dextrose Agar) media supplemented with different concentrations of atrazine (1-50 microg/ml), degraded the herbicide, attaining rates of 35% and 26%, respectively. On experiments of lettuce growth promotion using a soil-based potting media with different SMS rates, 5% and 10% (dw) rates of A. subrufescens SMS resulted in higher lettuce aerial dry weights than the rates of 25% and 40%, the chemical fertilization (NPK) and the control (soil). At 10% supplementation, lettuce aerial dry weight increased 2.2 and 1.3 times compared to the control and the NPK treatment, respectively. Protein content increased along with SMS rates. Fresh A. subrufescens SMS was an excellent supplement for lettuce growth promotion and showed potential for remediation of biocides possibly due to improved microbial diversity and enzymatic activity. Fresh L. edodes SMS was not a good fertilizer, at least under the conditions tested. However, microbiological analysis showed that promising results may be achieved when using fresh L. edodes SMS for soil remediation.

  2. Prevalence of Giardia sp. Cryptosporidium parvum and Cryptosporidium andersoni (syn. C. muris) [correction of Cryptosporidium parvum and Cryptosporidium muris (C. andersoni)] in 109 dairy herds in five counties of southeastern New York.

    Science.gov (United States)

    Wade, S E; Mohammed, H O; Schaaf, S L

    2000-11-01

    A cross-sectional study was undertaken to determine the prevalence of Giardia sp. (G. duodenalis group), Cryptosporidium parvum and Cryptosporidium andersoni (C. muris) [corrected] in dairy cattle in three different age groups, and to evaluate the association of age and season with prevalence. One hundred and nine dairy farms, from a total of 212 farms, in five counties of southeastern New York volunteered to participate. On these farms, 2943 fecal samples were collected from three defined age groups. The farms were randomly assigned for sampling within the four seasons of the year. Each farm was visited once during the study period from March 1993 to June 1994 to collect fecal samples. Demographic data on the study population was collected at the time of sampling by interviewing the farm owner or manager. At collection, fecal samples were scored as diarrheic or non-diarrheic, and each condition was later related to positive or negative infection with these parasites. Fecal samples were processed using a quantitative centrifugation concentration flotation technique and enumerated using bright field and phase contrast microscopy. In this study, the overall population prevalence for Giardia sp. was 8.9%; C. parvum, 0.9%; and C. muris, 1.1%. When considering animals most at the risk of infection (those younger than 6 months of age) Giardia sp. and C. parvum was found in 20.1 and 2.4% of the animals, respectively. Giardia sp. and C. muris were found in all age groups. There was no significant seasonal pattern of infection for any of these parasites.

  3. GreenSynFuels. Economical and technological statement regarding integration and storage of renewable energy in the energy sector by production of green synthetic fuels for utilization in fuel cells. Final project report

    Energy Technology Data Exchange (ETDEWEB)

    Lebaek, J. (Danish Technological Institute, Aarhus (Denmark)); Boegild Hansen, J. (Haldor Topsoee, Kgs. Lyngby (Denmark)); Mogensen, Mogens (Technical Univ. of Denmark, Risoe National Lab. for Sustainable Energy, Roskilde (Denmark)) (and others)

    2011-03-15

    The purpose of the project is to select and validate technology concepts for the establishment of a Danish production of green synthetic fuels primarily for fuel cells. The feasibility of the selected concepts is assessed trough a techno-economical calculation, which includes mass and energy balances and economics including CAPEX and OPEX assessments. It is envisioned by the project partners that a production of green synthetic fuels, such as methanol, can 1) bring stability to a future electricity grid with a high share of renewable energy, 2) replace fossil fuels in the transport sector, and 3) boost Danish green technology export. In the project, two technology concepts were derived through carefully considerations and plenum discussions by the project group members: Concept 1): Methanol/DME Synthesis based on Electrolysis assisted Gasification of Wood. Concept 2): Methanol/DME synthesis based on biogas temporarily stored in the natural gas network. Concept 1) is clearly the most favored by the project group and is therefore analyzed for its techno-economic feasibility. Using mass and energy balances the technical perspectives of the concept were investigated, along with an economic breakdown of the CAPEX and OPEX cost of the methanol production plant. The plant was technically compared to a traditional methanol production plant using gasified biomass. The project group has decided to focus on large scale plants, as the scale economics favor large scale plants. Therefore, the dimensioning input of the concept 1) plant is 1000 tons wood per day. This is truly a large scale gasification plant; however, in a methanol synthesis context the plant is not particularly large. The SOEC electrolyzer unit is dimensioned by the need of hydrogen to balance the stoichiometric ratio of the methanol synthesis reaction, which will result in 141 MW installed SOEC. The resulting methanol output is 1,050 tons methanol per day. In comparison to a traditional methanol synthesis plant operating on biomass gasification without electrolysis, the plant methanol output is doubled and the methanol production efficiency is boosted from 59 % to 71 %. The total plant efficiency was 81.6 %. The economic analysis revealed that green methanol can indeed be produced at prices very close to the current oil price. In the scenario using the present energy prices and assuming that the critical plant components were readily available, the methanol production was found to be 120 USD/barrel equivalents, which is very close to the current oil price. It can be concluded that the present report has shown that green methanol can indeed be produced at competitive prices and be used as step towards expanding the share of renewable in the energy system and especially in the transportation segment. Therefore, producing methanol from using electrolysis assisted gasification it is possible to produce green methanol from biomass with this ratio: 1,000 t wood = 1,053 t methanol at 120-170 USD/barrel equivalent (1.5 - 2 times the existing oil price - February 2010). (LN)

  4. Evidence for Nb-Ta Occurrences in the Syn-Tectonic Pan-African Mayo Salah Leucogranite (Northern Cameroon: Constraints from Nb-Ta Oxide Mineralogy, Geochemistry and U-Pb LA-ICP-MS Geochronology on Columbite and Monazite

    Directory of Open Access Journals (Sweden)

    Periclex Martial Fosso Tchunte

    2018-04-01

    Full Text Available The Mayo Salah pluton, which is located in the North-Cameroon domain of Central African Bold Belt (CAFB, is emplaced as a laccolith in volcano-sedimentary schists of Poli series, and displays features of Rare-metal Granite (RMG. It is made of two main rock groups: (1 the metaluminous barren muscovite granite (MsG and (2 the Nb-Ta bearing peraluminous leucogranite (MsL which expresses four subtypes. The evolved Rare-element MsL is subalkaline, slightly peraluminous (ASI = 1.01–1.21, and it displays flat REE chondrite-normalized patterns with a strong negative Eu anomaly (Eu/Eu* = 0.02–0.20. It belongs to the peraluminous low phosphorus Rare-element Granites and L-type igneous rocks, as shown by the relatively low Zr/Hf (4.8–14 and Nb/Ta (1.4–9.0 ratios and the positive slope of the Zr-Hf-Nb-Ta profile in spider diagrams. The rare-element-bearing mineral is represented by columbite-group minerals (CGM and other Nb-Ta-oxides (Nb-rutile and pyrochlore supergroup minerals. The CGM is classified as Mn-columbite, with Ta# and Mn# ratios increasing from core to rim. Two stages of mineralization are identified; the earliest stage (CGM-I consists in scattered tabular or prismatic euhedral grains that were related to magmatic fractionation. The latest stage (CGM-II is expressed as a Ta-rich Mn hydrothermal CGM episode represented as rims and/overgrowths around and/or as veinlet crosscutting CGM-I or in cleavage planes of muscovite. The U-Pb dating of columbite and monazite of the Mayo Salah leucogranite indicates a late-Neoproterozoic magmatic-hydrothermal mineralization event from 603.2 ± 5.3 to 581.6 ± 7.2 Ma, as consistent with both late D2 to D3 events that were recorded in the CAFB in Cameroon, and the associated continental collision environment. The Nb-Ta mineralization of the Mayo Salah pluton provides evidence for the presence of RMG in Northern Cameroon of CAFB, and its temporal association with the youngest period of metallogenic epoch of Nb-Ta-ore formation in Africa associated to Pan-African times.

  5. Investigation into the effects of trace coal syn gas species on the performance of solid oxide fuel cell anodes, PhD. thesis, Russ College of Engineering and Technology of Ohio University

    Energy Technology Data Exchange (ETDEWEB)

    Trembly, Jason P. [Ohio Univ., Athens, OH (United States). Russ College of Engineering and Technology

    2007-06-01

    Coal is the United States’ most widely used fossil fuel for the production of electric power. Coal’s availability and cost dictates that it will be used for many years to come in the United States for power production. As a result of the environmental impact of burning coal for power production more efficient and environmentally benign power production processes using coal are sought. Solid oxide fuel cells (SOFCs) combined with gasification technologies represent a potential methodology to produce electric power using coal in a much more efficient and cleaner manner. It has been shown in the past that trace species contained in coal, such as sulfur, severely degrade the performance of solid oxide fuel cells rendering them useless. Coal derived syngas cleanup technologies have been developed that efficiently remove sulfur to levels that do not cause any performance losses in solid oxide fuel cells. The ability of these systems to clean other trace species contained in syngas is not known nor is the effect of these trace species on the performance of solid oxide fuel cells. This works presents the thermodynamic and diffusion transport simulations that were combined with experimental testing to evaluate the effects of the trace species on the performance of solid oxide fuel cells. The results show that some trace species contained in coal will interact with the SOFC anode. In addition to the transport and thermodynamic simulations that were completed experimental tests were completed investigating the effect of HCl and AsH3 on the performance of SOFCs.

  6. Gelechiidae II (Gelechiinae: Gnorimoschemini)

    DEFF Research Database (Denmark)

    Huemer, Peter; Karsholt, Ole

    argentinae (Povolný, 1989) syn. n. of Phthorimaea operculella (Zeller, 1873); Opacopsis buvati Povolný, 1992 syn. n. of Ephysteris deserticolella (Staudinger, 1871); Doryphora? praticolella Christoph, 1872 as ssp. , syn. n. and Opacopsis gallica Povolný, 1992 syn. n. of Ephysteris insulella (Heinemann, 1870...

  7. Nature Identical Prosody

    DEFF Research Database (Denmark)

    Juel Henrichsen, Peter

    2012-01-01

    ; such as low naturalness (DiSyn) and dependence on huge amounts of background data (UnitSyn). We present a hybrid model based on high-level speech data. As preliminary tests show, prosodic models combining DiSyn style at the phone level with UnitSyn style at the supra-segmental levels may approach Unit...

  8. Autism-related behavioral abnormalities in synapsin knockout mice.

    Science.gov (United States)

    Greco, Barbara; Managò, Francesca; Tucci, Valter; Kao, Hung-Teh; Valtorta, Flavia; Benfenati, Fabio

    2013-08-15

    Several synaptic genes predisposing to autism-spectrum disorder (ASD) have been identified. Nonsense and missense mutations in the SYN1 gene encoding for Synapsin I have been identified in families segregating for idiopathic epilepsy and ASD and genetic mapping analyses have identified variations in the SYN2 gene as significantly contributing to epilepsy predisposition. Synapsins (Syn I/II/III) are a multigene family of synaptic vesicle-associated phosphoproteins playing multiple roles in synaptic development, transmission and plasticity. Lack of SynI and/or SynII triggers a strong epileptic phenotype in mice associated with mild cognitive impairments that are also present in the non-epileptic SynIII(-/-) mice. SynII(-/-) and SynIII(-/-) mice also display schizophrenia-like traits, suggesting that Syns could be involved in the regulation of social behavior. Here, we studied social interaction and novelty, social recognition and social dominance, social transmission of food preference and social memory in groups of male SynI(-/-), SynII(-/-) and SynIII(-/-) mice before and after the appearance of the epileptic phenotype and compared their performances with control mice. We found that deletion of Syn isoforms widely impairs social behaviors and repetitive behaviors, resulting in ASD-related phenotypes. SynI or SynIII deletion altered social behavior, whereas SynII deletion extensively impaired various aspects of social behavior and memory, altered exploration of a novel environment and increased self-grooming. Social impairments of SynI(-/-) and SynII(-/-) mice were evident also before the onset of seizures. The results demonstrate an involvement of Syns in generation of the behavioral traits of ASD and identify Syn knockout mice as a useful experimental model of ASD and epilepsy. Copyright © 2013 Elsevier B.V. All rights reserved.

  9. NOTE TASSONOMICHE E NOMENCLATORIALI SU ALCUNE SPECIE PALEARTICHE DI SIBINIA E TYCHIUS (COLEOPTERA, CURCULIONIDAE

    Directory of Open Access Journals (Sweden)

    Roberto Caldara

    2009-10-01

    Full Text Available In accordo con le disposizioni del codice internazionale di Nomenclatura Zoologica, vengono proposte otto azioni allo scopo di salvaguardare la stabilità della nomenclatura attuale di alcune specie della tribù Tychiini. seguendo le indicazioni dell’Articolo 23.9.1, Sibinia subelliptica Desbrochers, 1873 è considerato nomen protectum e Gymnetron schaumi Becker, 1864 è considerato nomen oblitum; Sibinia phalerata Gyllenhal, 1836 è considerato nomen protectum e Sibinia centromaculata Villa & Villa, 1835 è considerato nomen oblitum. Essendo presenti le condizioni richieste dall’articolo 75.3, vengono designati i neotipi dei seguenti taxa: Sibinia centromaculata Villa & Villa, 1835; Sybines pulchellus Desbrochers, 1875. Sono inoltre stabiliti i lectotypi di: Gymne­ tron schaumi Becker, 1864; Sibinia attalica Gyllenhal var. lateralis Desbrochers, 1895; Sibinia cinctella Desbrochers, 1898; Sibinia pozuelica Fuente, 1910; Tychius barceloni­cus Desbrochers, 1908; Tychius edentatus Desbrochers, 1895; Tychius pallidicornis Desbrochers, 1875; Tychius parvulus Stephens, 1831; Tychius seductor Desbrochers, 1908. Vengono proposte le seguenti nuove sinonimie: Sibinia bipunctata Kirsch, 1870 = Sibi­nia postsignata Voss, 1971 n. syn.; Sibinia exigua Faust = Sibinia cinctella Desbrochers, 1898 n. syn.; Sibinia femoralis Germar, 1824 = Sibinia attalica var. lateralis Desbrochers, 1895 n. syn. = Sibinia consanguinea Desbrochers, 1895 n. syn. = Sibinia attalica var. curtula Desbrochers, 1907 n. syn. = Sibinia dilataticollis Desbrochers, 1907 n. syn.= Sibinia seducta Desbrochers, 1907 n. syn. = Sibinia pozuelica Fuente, 1910 n. syn.; Si­binia pici Desbrochers = Sibinia otiosa Hustache, 1944 n. syn. = Sibinia praeventa Hustache, 1944 n. syn.; Sibinia subelliptica Desbrochers, 1873 = Sibinia schaumei Desbrochers, 1895 n. syn.; Sibinia unicolor Fåhraeus, 1843 = Sybines pulchellus Desbrochers, 1875 n. syn. = Sibinia ochreata Schilsky, 1912 n. syn

  10. Evaluating the relationship between amyloid-β and α-synuclein phosphorylated at Ser129 in dementia with Lewy bodies and Parkinson’s disease

    OpenAIRE

    Swirski, Marta; Miners, J Scott; de Silva, Rohan; Lashley, Tammaryn; Ling, Helen; Holton, Janice; Revesz, Tamas; Love, Seth

    2014-01-01

    Introduction Lewy body and Alzheimer-type pathologies often co-exist. Several studies suggest a synergistic relationship between amyloid-β (Aβ) and α-synuclein (α-syn) accumulation. We have explored the relationship between Aβ accumulation and the phosphorylation of α-syn at serine-129 (pSer129 α-syn), in post-mortem human brain tissue and in SH-SY5Y neuroblastoma cells transfected to overexpress human α-syn. Methods We measured levels of Aβ40, Aβ42, α-syn and pSer129 α-syn by sandwich enzyme...

  11. 21 CFR 184.1333 - Gum ghatti.

    Science.gov (United States)

    2010-04-01

    ... the bark of Anogeissus latifolia, a large tree found in the dry deciduous forests of India and Ceylon... percent). (3) Loss on drying. Not more than 14 percent dried at 105 °C for 5 hours. (4) Identification...

  12. Phytophthora obscura sp. nov., a new species of the novel Phytophthora subclade 8d

    Science.gov (United States)

    N. J. Grünwald; S. Werres; E. M. Goss; C. R. Taylor; V. J. Fieland

    2012-01-01

    A new Phytophthora species was detected (i) in the USA, infecting foliage of Kalmia latifolia, (ii) in substrate underneath Pieris, and (iii) in Germany in soil samples underneath Aesculus hippocastanum showing disease symptoms. The new...

  13. Semiochemical -Based Communication in interspecific interactions between IPS PINI and Pityogenes Knecteli (Swaine) (Coleoptera: Scolytidae) in Lodgepole Pine

    Science.gov (United States)

    Therese M. Poland; John H. Borden

    1994-01-01

    The pine engraver, Ips pini Say, and Pityogenes knechteli Swaine often co-exist in lodgepole pine, Pinus contorta var. latifolia Engelmann. We tested the hypotheses that P. knechteli produces an attractive pheromone and that the attraction of P. knechteli...

  14. Use of Strategic Placement of Dredged Sediments to Support Horseshoe Island in the Atchafalaya River, Louisiana: A Preliminary Ecological Survey

    Science.gov (United States)

    2014-08-01

    cowpea (Vigna luteola), broadleaf cattail (Typha latifolia), invasive Chinese tallowtree (Triadica sebifera), rosemallow (Hibiscus lasiocarpos), and...Benth. hairypod cowpea Fabaceae N Vigna unguiculata (L.) Walp. cowpea Fabaceae - Hydrilla verticillata (L. f.) Royle waterthyme Hydrocharitaceae I

  15. Acute and Sub-Acute Toxicity of Aqueous Extract of Nauclea ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research January 2014; 13 (1): 109-115 ... Purpose: To determine the dose – toxicity profile of the aqueous extract of Nauclea latifolia stem bark. (AQE). ... cause single-strand breaks in liver, kidney and.

  16. Potential for phosphate mitigation from agricultural runoff by three aquatic macrophytes

    Science.gov (United States)

    Phosphate from agricultural runoff is considered a contributor to eutrophication. Three aquatic macrophyte species, Leersia oryzoides, Typha latifolia, and Sparganium americanum, were investigated for their phosphate mitigation ability. Mesocosms were exposed to flowing phosphate enriched water (1...

  17. Acute and Sub-Acute Toxicity of Aqueous Extract of Nauclea ...

    African Journals Online (AJOL)

    Keywords: Nauclea latifolia, Renal excretion, Hematological parameters, Biomarkers, Allergy,. Inflammation, Diuretic ... long-term and low-dose exposures to human are subject is highly ... with standard feed in solid (balls). The animals.

  18. Copepoda: Pandaridae

    African Journals Online (AJOL)

    1991-03-04

    ,27(1) finely striated marginal membrane is present along the anterior and lateral margins of the cephalothorax of D. latifolia (Figure 1 & 4c), which no doubt fonns an effective seal against the host tissue. Posteriorly, however ...

  19. GLOBAL JOURNAL OF AGRICULTURAL SCIENCES ISSN 1596-2903

    African Journals Online (AJOL)

    Ada Global

    semi-hardwood and softwood) of the stem cuttings of G. latifolia in relation to ... second week after planting even though softwood cuttings started earlier showed the importance of carbohydrate ..... women in the University of Nigeria, Nsukka.

  20. Dose evaluation in criticality accidents using response of panasonic TL personal dosemeters (UD-809/UD-802)

    International Nuclear Information System (INIS)

    Zeyrek, C. T.; Guenduez, H.

    2012-01-01

    This study gives the results of dosimetry measurements carried out in the Silene reactor at Valduc (France) with neutron and photon personal thermoluminescence dosemeters (TLDs) in mixed neutron and gamma radiation fields, in the frame of the international accident dosimetry intercomparison programme in 2002. The intercomparison consisted of a series of three irradiation scenarios. The scenarios took place at the Valduc site (France) by using the Silene experimental reactor. For neutron and photon dosimetry, Panasonic model UD-809 and UD-802 personal TLDs were used together. (authors)