National assessment of shoreline change—Summary statistics for updated vector shorelines and associated shoreline change data for the north coast of Alaska, U.S.-Canadian Border to Icy Cape

Science.gov (United States)

Gibbs, Ann E.; Richmond, Bruce M.

2017-09-25

Long-term rates of shoreline change for the north coast of Alaska, from the U.S.-Canadian border to the Icy Cape region of northern Alaska, have been updated as part of the U.S. Geological Survey’s National Assessment of Shoreline Change Project. Short-term shoreline change rates are reported for the first time. Additional shoreline position data were used to compute rates where the previous rate-of-change assessment only included two shoreline positions at a given location. The calculation of uncertainty associated with the long-term average rates has also been updated to match refined methods used in other study regions of the National Assessment of Shoreline Change Project. The average rates of this report have a reduced amount of uncertainty compared to those presented in the first assessment for this region.

Performance of a process-based hydrodynamic model in predicting shoreline change

Science.gov (United States)

Safak, I.; Warner, J. C.; List, J. H.

2012-12-01

Shoreline change is controlled by a complex combination of processes that include waves, currents, sediment characteristics and availability, geologic framework, human interventions, and sea level rise. A comprehensive data set of shoreline position (14 shorelines between 1978-2002) along the continuous and relatively non-interrupted North Carolina Coast from Oregon Inlet to Cape Hatteras (65 km) reveals a spatial pattern of alternating erosion and accretion, with an erosional average shoreline change rate of -1.6 m/yr and up to -8 m/yr in some locations. This data set gives a unique opportunity to study long-term shoreline change in an area hit by frequent storm events while relatively uninfluenced by human interventions and the effects of tidal inlets. Accurate predictions of long-term shoreline change may require a model that accurately resolves surf zone processes and sediment transport patterns. Conventional methods for predicting shoreline change such as one-line models and regression of shoreline positions have been designed for computational efficiency. These methods, however, not only have several underlying restrictions (validity for small angle of wave approach, assuming bottom contours and shoreline to be parallel, depth of closure, etc.) but also their empirical estimates of sediment transport rates in the surf zone have been shown to vary greatly from the calculations of process-based hydrodynamic models. We focus on hind-casting long-term shoreline change using components of the process-based, three-dimensional coupled-ocean-atmosphere-wave-sediment transport modeling system (COAWST). COAWST is forced with historical predictions of atmospheric and oceanographic data from public-domain global models. Through a method of coupled concurrent grid-refinement approach in COAWST, the finest grid with resolution of O(10 m) that covers the surf zone along the section of interest is forced at its spatial boundaries with waves and currents computed on the grids

Regional shoreline change and coastal erosion hazards in Arctic Alaska

Science.gov (United States)

Gibbs, Ann E.; Richmond, Bruce M.; Erikson, Li H.; Harden, E. Lynne; Wallendorf, Louise

2011-01-01

Historical shoreline positions along the mainland Beaufort Sea coast of Alaska were digitized and analyzed to determine the long-term rate of change. Average shoreline change rates and ranges from 1947 to the mid-2000s were determined every 50 meters between Barrow and Demarcation Point, at the U.S.-Canadian border. Results show that shoreline change rates are highly variable along the coast, with an average regional shoreline change rate of-2.0 m/yr and localized rates of up to -19 m/yr. The highest erosion rates were observed at headlands, points, and associated with breached thermokarst lakes. Areas of accretion were limited, and generally associated with spit extension and minor beach accretion. In general, erosion rates increase from east to west, with overall higher rates east of Harrison Bay.

Quantification of shoreline change along Hatteras Island, North Carolina: Oregon Inlet to Cape Hatteras, 1978-2002, and associated vector shoreline data

Science.gov (United States)

Hapke, Cheryl J.; Henderson, Rachel E.

2015-01-01

Shoreline change spanning twenty-four years was assessed along the coastline of Cape Hatteras National Seashore, at Hatteras Island, North Carolina. The shorelines used in the analysis were generated from georeferenced historical aerial imagery and are used to develop shoreline change rates for Hatteras Island, from Oregon Inlet to Cape Hatteras. A total of 14 dates of aerial photographs ranging from 1978 through 2002 were obtained from the U.S. Army Corp of Engineers Field Research Facility in Duck, North Carolina, and scanned to generate digital imagery. The digital imagery was georeferenced and high water line shorelines (interpreted from the wet/dry line) were digitized from each date to produce a time series of shorelines for the study area. Rates of shoreline change were calculated for three periods: the full span of the time series, 1978 through 2002, and two approximately decadal subsets, 1978–89 and 1989–2002.

Multidecadal shoreline changes of atoll islands in the Marshall Islands

Science.gov (United States)

Ford, M.

2012-12-01

Atoll islands are considered highly vulnerable to the impacts of continued sea level rise. One of the most commonly predicted outcomes of continued sea level rise is widespread and chronic shoreline erosion. Despite the widespread implications of predicted erosion, the decadal scale changes of atoll island shorelines are poorly resolved. The Marshall Islands is one of only four countries where the majority of inhabited land is comprised of reef and atoll islands. Consisting of 29 atolls and 5 mid-ocean reef islands, the Marshall Islands are considered highly vulnerable to the impacts of sea level rise. A detailed analysis of shoreline change on over 300 islands on 10 atolls was undertaken using historic aerial photos (1945-1978) and modern high resolution satellite imagery (2004-2012). Results highlight the complex and dynamic nature of atoll islands, with significant shifts in shoreline position observed over the period of analysis. Results suggest shoreline accretion is the dominant mode of change on the islands studied, often associated with a net increase in vegetated island area. However, considerable inter- and intra-atoll variability exists with regards to shoreline stability. Findings are discussed with respect to island morphodynamics and potential hazard mitigation and planning responses within atoll settings.

Drivers of coastal shoreline change: case study of hon dat coast, Kien Giang, Vietnam.

Science.gov (United States)

Nguyen, Hai-Hoa; McAlpine, Clive; Pullar, David; Leisz, Stephen Joseph; Galina, Gramotnev

2015-05-01

Coastal shorelines are naturally dynamic, shifting in response to coastal geomorphological processes. Globally, land use change associated with coastal urban development and growing human population pressures is accelerating coastal shoreline change. In southern Vietnam, coastal erosion currently is posing considerable risks to shoreline land use and coastal inhabitants. The aim of this paper is to quantify historical shoreline changes along the Hon Dat coast between 1995 and 2009, and to document the relationships between coastal mangrove composition, width and density, and rates of shoreline change. The generalized linear mixed-effects models were used to quantify the major biophysical and land-use factors influencing shoreline change rates. Most significant drivers of the rates of change are cutting of mangroves, the dominant mangrove genus, changes in adjacent shoreline land use, changes of shoreline land cover, and width of fringing mangroves. We suggest that a possible and inexpensive strategy for robust mangrove shoreline defense is direct mangrove planting to promote mangrove density with the presence of breakwater structures. In the shorter term, construction of coastal barriers such as fence-structured melaleuca poles in combination with mangrove restoration schemes could help retain coastal sediments and increase the elevation of the accretion zone, thereby helping to stabilize eroding fringe shorelines. It also is recommended that implementation of a system of payments for mangrove ecosystem services and the stronger regulation of mangrove cutting and unsustainable land-use change to strengthen the effectiveness of mangrove conservation programs and coastal land-use management.

Drivers of Coastal Shoreline Change: Case Study of Hon Dat Coast, Kien Giang, Vietnam

Science.gov (United States)

Nguyen, Hai-Hoa; McAlpine, Clive; Pullar, David; Leisz, Stephen Joseph; Galina, Gramotnev

2015-05-01

Coastal shorelines are naturally dynamic, shifting in response to coastal geomorphological processes. Globally, land use change associated with coastal urban development and growing human population pressures is accelerating coastal shoreline change. In southern Vietnam, coastal erosion currently is posing considerable risks to shoreline land use and coastal inhabitants. The aim of this paper is to quantify historical shoreline changes along the Hon Dat coast between 1995 and 2009, and to document the relationships between coastal mangrove composition, width and density, and rates of shoreline change. The generalized linear mixed-effects models were used to quantify the major biophysical and land-use factors influencing shoreline change rates. Most significant drivers of the rates of change are cutting of mangroves, the dominant mangrove genus, changes in adjacent shoreline land use, changes of shoreline land cover, and width of fringing mangroves. We suggest that a possible and inexpensive strategy for robust mangrove shoreline defense is direct mangrove planting to promote mangrove density with the presence of breakwater structures. In the shorter term, construction of coastal barriers such as fence-structured melaleuca poles in combination with mangrove restoration schemes could help retain coastal sediments and increase the elevation of the accretion zone, thereby helping to stabilize eroding fringe shorelines. It also is recommended that implementation of a system of payments for mangrove ecosystem services and the stronger regulation of mangrove cutting and unsustainable land-use change to strengthen the effectiveness of mangrove conservation programs and coastal land-use management.

Shoreline changes in and around the Thubon River mouth, Central Vietnam

Digital Repository Service at National Institute of Oceanography (India)

Mau, L.D.; Nayak, G.N.; SanilKumar, V.

Application of GENESIS model (GENEralized model for Simulating Shoreline change) for studying the shoreline change in and around the Thubon River Mouth, Central Vietnam is presented in this paper The input parameters used are the near shore wave...

Subtidal Bathymetric Changes by Shoreline Armoring Removal and Restoration Projects

Science.gov (United States)

Wallace, J.

2016-12-01

The Salish Sea, a region with a diverse coastline, is altered by anthropogenic shoreline modifications such as seawalls. In recent years, local organizations have moved to restore these shorelines. Current research monitors the changes restoration projects have on the upper beach, lower beach, and intertidal, however little research exists to record possible negative effects on the subtidal. The purpose of this research is to utilize multibeam sonar bathymetric data to analyze possible changes to the seafloor structure of the subtidal in response to shoreline modification and to investigate potential ecosystem consequences of shoreline alteration. The subtidal is home to several species including eelgrass (Zostera marina). Eelgrass is an important species in Puget Sound as it provides many key ecosystem functions including providing habitat for a wide variety of organisms, affecting the physics of waves, and sediment transport in the subtidal. Thus bathymetric changes could impact eelgrass growth and reduce its ability to provide crucial ecosystem services. Three Washington state study sites of completed shoreline restoration projects were used to generate data from areas of varied topographic classification, Seahurst Park in Burien, the Snohomish County Nearshore Restoration Project in Everett, and Cornet Bay State Park on Whidbey Island. Multibeam sonar data was acquired using a Konsberg EM 2040 system and post-processed in Caris HIPS to generate a base surface of one-meter resolution. It was then imported into the ArcGIS software suite for the generation of spatial metrics. Measurements of change were calculated through a comparison of historical and generated data. Descriptive metrics generated included, total elevation change, percent area changed, and a transition matrix of positive and negative change. Additionally, pattern metrics such as, surface roughness, and Bathymetric Position Index (BPI), were calculated. The comparison of historical data to new data

Emerging and Submerging Shorelines: Impacts of Physical Change on Bioband Length

Science.gov (United States)

Kruger, L. E.; Johnson, A. C.; Gregovich, D.; Buma, B.; Noel, J.

2017-12-01

We approximated shifts in coastal benthic species for shoreline length units undergoing both sea level rise and relative sea level lowering (often post-glacial, termed isostatic rebound) where subsistence-based, southeast Alaska Natives reside. From six community centers, we examined 30 km radii shoreline reaches by merging relevant portions of the NOAA ShoreZone database with near shore bathymetry and measures of mean global sea level rise with local global positioning system information (GIS) of tectonic shift and isostatic rebound. For our analysis, we estimated change for 9,868 assessed shoreline length units having uniform substrate and biologic type over a 100-yr time span (2008-2108) using geometric analysis of shoreline attributes. For each shoreline length unit we assessed relationships among substrate, slope, exposure, and presence of five benthic species including eel grass (Zostera marina), blue mussel (Mytilus edulis), butter clams (Saxidomus gigantean), bull kelp (Nereocytis leutkeana), and foliose red algae including ribbon kelp (Palmaria sp.). Our research indicates that both emergence, up to 1.8 m, and submergence, up 0.2 m, of the land will result in disportionately larger shoreline length segment alterations for habitats in protected low-slope gradient bays and estuaries (dominated by eelgrass and butter clam habitats) with less change for rocky steep-gradient exposed penninsulas (red algae and canopy kelp). This trend, holding true regardless of isostatic rebound, tectonic shift or sea level rise rate, highlights the importance of initial geomorphology-based assessments serving to improve bio-physical, chemical, and socially-related coastal research. Where shorelines are emerging 30% decreases in estuary lengths are predicted, but where shorelines are submerging up to 3% increases in estuaries are expected. Our research results are consistent with anthropology studies assessing past coastal change. Coastal change, influencing subsistance foods

SLR-induced temporal and spatial changes in hotspots to storms along the Catalan coast

Science.gov (United States)

Jiménez, Jose A.; Sanuy, Marc; Valdemoro, Herminia

2017-04-01

any significant increasing trend, this does not imply that storm-induced coastal hazards will not change. Thus, SLR will induce a series of long-term changes in coastal areas that although not directly affecting storminess will modify the coastal resilient capacity and, thus, changing coastal storm risks. To provide long-term predictions of hotspot, we have assessed the long-term SLR influence on erosion and inundation risks. To do this, an equilibrium-based approach has been adopted in which background SLR-induced shoreline retreat and beach vertical response are assessed for different SLR scenarios. Obtained values are used to predict future coastal morphology and to compute the resilient capacity for each beach at any time horizon. With this information, future erosion and inundation risks and corresponding new spatial distributions of coastal hotspots are calculated for selected probabilities. Obtained results show a significant increase in hotspots along the coast, with most of the changes concentrated in areas with small accommodation space and dominated by mild slope shorefaces. The extension of the new hotspots seems to indicate than unless land planning is considered as a tool for risk reduction, massive protection need to be implemented in certain areas.

Monitoring of shoreline changes using remote sensing (case study: coastal city of Bandar Abbas)

International Nuclear Information System (INIS)

Tamassoki, E; Amiri, H; Soleymani, Z

2014-01-01

Shoreline change is one of the most common natural processes that prevail upon coastal areas. The most important aspect of managing coastal areas is identifying the location and change over time of shoreline. This requires frequent monitoring of the shoreline using satellite imagery over time. We have used imagery from the Landsat TM-5 sensor from 1984,1998 and 2009 in order to monitor shoreline changes using the Max Likelihood Classification method (MLC) in Bandar Abbas city. Monitoring showed that during the period from 1984 to 1998 the area of coastline of Bandar Abbas increased 804.09 hectares. The increase over the next 11-year period was as less, at only 140.81 hectares. In 2009 there was a drastic decrease in shoreline, with the total length of shoreline decreasing from 330 km to 271 km during the period from 1984 to 2009.Results showed that in each period in which the area of coastline advanced, changes in length of shoreline had been less prominent

Shoreline change assessment using multi-temporal satellite images: a case study of Lake Sapanca, NW Turkey.

Science.gov (United States)

Duru, Umit

2017-08-01

The research summarized here determines historical shoreline changes along Lake Sapanca by using Remote Sensing (RS) and Geographical Information Systems (GIS). Six multi-temporal satellite images of Landsat Multispectral Scanner (L1-5 MMS), Enhanced Thematic Mapper Plus (L7 ETM+), and Operational Land Imager Sensors (L8 OLI), covering the period between 17 June 1975 and 15 July 2016, were used to monitor shoreline positions and estimate change rates along the coastal zone. After pre-possessing routines, the Normalized Difference Water Index (NDWI), Modified Normalized Difference Water Index (MNDWI), and supervised classification techniques were utilized to extract six different shorelines. Digital Shoreline Analysis System (DSAS), a toolbox that enables transect-based computations of shoreline displacement, was used to compute historical shoreline change rates. The average rate of shoreline change for the entire cost was 2.7 m/year of progradation with an uncertainty of 0.2 m/year. While the great part of the lake shoreline remained stable, the study concluded that the easterly and westerly coasts and deltaic coasts are more vulnerable to shoreline displacements over the last four decades. The study also reveals that anthropogenic activities, more specifically over extraction of freshwater from the lake, cyclic variation in rainfall, and deposition of sediment transported by the surrounding creeks dominantly control spatiotemporal shoreline changes in the region. Monitoring shoreline changes using multi-temporal satellite images is a significant component for the coastal decision-making and management.

Changes in the shoreline at Paradip Port, India in response to climate change

Science.gov (United States)

Gopikrishna, B.; Deo, M. C.

2018-02-01

One of the popular methods to predict shoreline shifts into the future involves use of a shoreline evolution model driven by the historical wave climate. It is however understood by now that historical wave conditions might substantially change in future in response to climate change induced by the global warming. The future shoreline changes as well as sediment transport therefore need to be determined with the help of future projections of wave climate. In this work this is done at the port of Paradip situated along the east coast of India. The high resolution wind resulting from a climate modelling experiment called: CORDEX, South Asia, was used to simulate waves over two time-slices of 25 years each in past and future. The wave simulations were carried out with the help of a numerical wave model. Thereafter, rates of longshore sediment transport as well as shoreline shifts were determined over past and future using a numerical shoreline model. It was found that at Paradip Port the net littoral drift per metre width of cross-shore might go up by 37% and so also the net accumulated drift over the entire cross-shore width by 71%. This could be caused by an increase in the mean significant wave height of around 32% and also by changes in the frequency and direction of waves. The intensification of waves in turn might result from an increase in the mean wind speed of around 19%. Similarly, the horizontal extent of the beach accretion and erosion at the port's southern breakwater might go up by 4 m and 8 m, respectively, from the current level in another 25 years. This study should be useful in framing future port management strategies.

Measuring Sea Level Rise-Induced Shoreline Changes and Inundation in Real Time

Science.gov (United States)

Shilling, F.; Waetjen, D.; Grijalva, E.

2016-12-01

We describe a method to monitor shoreline inundation and changes in response to sea level rise (SLR) using a network of time-lapse cameras. We found for coastal tidal marshes that this method was sensitive to vertical changes in sea level of 20 cm has occurred in the San Francisco Bay and other US coastal areas and is likely to rise by another 30-45 cm by mid-century, which will flood and erode many coastal ecosystems, highways, and urban areas. This rapid degree of rise means that it is imperative to co-plan for natural and built systems. Many public facilities are adjacent to shoreline ecosystems, which both protect infrastructure from wave and tide energy and are home to regulated species and habitats. Accurate and timely information about the actual extent of SLR impacts to shorelines will be critical during built-system adaptation. Currently, satellite-sourced imagery cannot provide the spatial or temporal resolution necessary to investigate fine-scale shoreline changes, leaving a gap between predictive models and knowing how, where and when these changes are occurring. The method described is feasible for near-term (1 to 10 years) to long-term application and can be used for measuring fine-resolution shoreline changes (organize photographs that could be combined with related external data (e.g., gauged water levels) to create an information mashup. This information could be used to validate models predicting shoreline inundation and loss, inform SLR-adaptation planning, and to visualize SLR impacts to the public.

Numerical simulation of hydrodynamic and water quality effects of shoreline changes in Bohai Bay

Science.gov (United States)

Jia, Han; Shen, Yongming; Su, Meirong; Yu, Chunxue

2018-02-01

This study uses the HD and Ecolab modules of MIKE to simulate the hydrodynamic and water quality and predict the influence of shoreline changes in Bohai Bay, China. The study shows that shoreline changes weaken the residual current and generate a counter-clockwise circulation south of Huanghua Port, thereby resulting in weak water exchange capacity and low pollutant-diffusing capacity. Shoreline changes reduce the area of Bohai Bay, resulting in a smaller tidal prism and further weakening the water exchange capacity. This situation is not conducive to the diffusion of pollutants, and therefore may lead to increased water pollution in the bay. Shoreline changes hinder the spread of runoff, weaken the dilution effect of the river on seawater, and block the spread of coastal residual current, thereby resulting in increased salinity near the reclamation area. Shoreline changes lead to an increase in PO4-P concentration and decrease in DIN concentration. The value of N/P near the project decreases, thereby weakening the phosphorus-limited effect.

Correlation between land use changes and shoreline changes around THE Nakdong River in Korea using landsat images.

Science.gov (United States)

Kwon, J. S.; Lim, C.; Baek, S. G.; Shin, S.

2015-12-01

Coastal erosion has badly affected the marine environment, as well as the safety of various coastal structures. In order to monitor shoreline changes due to coastal erosion, remote sensing techniques are being utilized. The land-cover map classifies the physical material on the surface of the earth, and it can be utilized in establishing eco-policy and land-use policy. In this study, we analyzed the correlation between land-use changes around the Nakdong River and shoreline changes at Busan Dadaepo Beach adjacent to the river. We produced the land-cover map based on the guidelines published by the Ministry of Environment Korea, using eight Landsat satellite images obtained from 1984 to 2015. To observe land use changes around the Nakdong River, the study site was set to include the surroundings areas of the Busan Dadaepo Beach, the Nakdong River as well as its estuary, and also Busan New Port. For the land-use classification of the study site, we also produced a land-cover map divided into seven categories according to the Ministry of Environment, Korea guidelines and using the most accurate Maximum Likelihood Method (MLM). Land use changes inland, at 500m from the shoreline, were excluded for the correlation analysis between land use changes and shoreline changes. The other categories, except for the water category, were transformed into numerical values and the land-use classifications, using all other categories, were analyzed. Shoreline changes were observed by setting the base-line and three cut-lines. We assumed that longshore bars around the Nakdong River and the shoreline of the Busan Dadaepo Beach are affected. Therefore, we expect that shoreline changes happen due to the influence of barren land, wetlands, built-up areas and deposition. The causes are due to natural factors, such as weather, waves, tide currents, longshore currents, and also artificial factors such as coastal structures, construction, and dredging.

Decision analysis of shoreline protection under climate change uncertainty

Science.gov (United States)

Chao, Philip T.; Hobbs, Benjamin F.

1997-04-01

If global warming occurs, it could significantly affect water resource distribution and availability. Yet it is unclear whether the prospect of such change is relevant to water resources management decisions being made today. We model a shoreline protection decision problem with a stochastic dynamic program (SDP) to determine whether consideration of the possibility of climate change would alter the decision. Three questions are addressed with the SDP: (l) How important is climate change compared to other uncertainties?, (2) What is the economic loss if climate change uncertainty is ignored?, and (3) How does belief in climate change affect the timing of the decision? In the case study, sensitivity analysis shows that uncertainty in real discount rates has a stronger effect upon the decision than belief in climate change. Nevertheless, a strong belief in climate change makes the shoreline protection project less attractive and often alters the decision to build it.

55-year (1960-2015) spatiotemporal shoreline change analysis using historical DISP and Landsat time series data in Shanghai

Science.gov (United States)

Qiao, Gang; Mi, Huan; Wang, Weian; Tong, Xiaohua; Li, Zhongbin; Li, Tan; Liu, Shijie; Hong, Yang

2018-06-01

Shoreline change has been an increasing concern for low-lying and vulnerable coastal zones worldwide, especially in estuarine delta regions, which generally have significant economic development, large human settlements and infrastructures. Thus, long time-series shoreline change data are useful for understanding how shorelines respond to natural and anthropogenic activities, as well as for providing greater insights into coastal protection and sustainable development in the future. For the first time, this study analyzes 55 years of spatiotemporal shoreline changes in Shanghai, China, by integrating the historical Declassified Intelligence Satellite Photography (DISP) and Landsat time series data at five-year intervals from 1960 to 2015. Twelve shorelines were interpreted from DISP and Landsat images. The spatiotemporal changes in the shorelines were explored at five-year intervals within the study period for the Shanghai mainland and islands. The results indicate that shorelines in Shanghai accreted significantly over the last 55 years, but different accretion patterns were observed in Chongming Dongtan. The rate of shoreline change varied in different areas, and the most noticeable expansions were Chongming Beitan, Chongming Dongtan, Hengsha Dongtan, and Nanhuizui. The length of the entire shoreline increased by 25.7% from 472.6 km in 1960 to 594.2 km in 2015. Due to the shoreline changes, the Shanghai area expanded by 1,192.5 km2 by 2015, which was an increase of 19.9% relative to its 1960 area. The Digital Shoreline Analysis System (DSAS) was used to compute rate-of-change statistics. Between 1960 and 2015, 10.6% of the total transects exceeded 3 km of Net Shoreline Movement (NSM), with a maximum value of approximately 20 km at eastern Hengsha Island. The average Weighted Linear Regression Rate (WLR) of the Shanghai shoreline was 52.2 m/yr from 1960 to 2015; there was 94.1% accretion, 3.1% erosion, and 2.8% with no significant change. In addition, the driving

Wave energy fluxes and multi-decadal shoreline changes

DEFF Research Database (Denmark)

Kabuth, Alina Kristin; Kroon, Aart

2014-01-01

Spatial patterns of multidecadal shoreline changes in two microtidal, low-energetic embayments of southern Zealand, Denmark, were investigated by using the directional distribution of wave energy fluxes. The sites include a barrier island system attached to moraine bluffs, and a recurved spit...... variability of directional distributions of wave energy fluxes furthermore outlined potential sediment sources and sinks for the evolution of the barrier island system and for the evolution of the recurved spit....... adjacent to a cliff coast. The barrier island system is characterized by cross-shore translation and by an alignment of the barrier alongshore alternating directions of barrier-spit progradation in a bidirectional wave field. The recurved spit adjacent to the cliff coast experienced shoreline rotation...

Modeling of Shoreline Changes of Tulamben Coast, Bali Indonesia

Science.gov (United States)

Yuanita, Nita; Pratama, Roka; Husrin, Semeidi

2015-04-01

Modeling of Shoreline Changes of Tulamben Coast, Bali Indonesia Tulamben coast is located in Lombok Strait on the northeastern coast of Bali island, Indonesia, as part of Karang Asem district. Severe erosion along the coastline has long been occurred in Karang Asem area and threatening houses, religious buildings (Hindu temples), and a national heritage site. As one of most popular diving site in Bali Island, Tulamben attracted many local and international tourist since 1980. The main attraction of Tulamben diving site is the USAT Liberty ship that was shipwrecked in Tulamben beach in 1942, after attacked by Japanese torpedo in Lombok Strait. Currently about 150 diver visit Tulamben per day. Due to physical changes of coastal environmental such as coastal erosion, sliding, and scouring, the shipwreck is vulnerable. It had been slipped off the beach several times and is predicted would be moved to deeper offshore floor if it is not protected. Coastal erosion in Karang Asem district is occurred probably due to interaction between cross-shore and long-shore wave-generated current and river sand supply decreasing after sand mining activities. In this study, the effect of cross-shore and longshore transport to coastal erosion in Tulamben is analyzed by doing numerical model. Numerical simulation of shoreline changes is performed by using Beach Processes Module of CEDAS (Coastal Engineering Design and Analysis System) consists of SBEACH and GENESIS. The model domain is covered Karang Asem coastline about 60 km length and wave data is calculated from hourly wind data (10 years). Simulated shoreline is calibrated using shoreline data from 1972 to 2013. Using calibrated model, then the simulation is performed from 2003 - 2013. From the simulation it is determined that longshore current and longshore sediment contribute to coastal erosion in Tulamben. Based on model results, several alternatives of general layout and configuration of coastal protection structures is proposed

Exploring the Dominant Modes of Shoreline Change Along the Central Florida Atlantic Coast

Science.gov (United States)

Conlin, M. P.; Adams, P. N.; Jaeger, J. M.; MacKenzie, R.

2017-12-01

Geomorphic change within the littoral zone can place communities, ecosystems, and critical infrastructure at risk as the coastal environment responds to changes in sea level, sediment supply, and wave climate. At NASA's Kennedy Space Center near Cape Canaveral, Florida, chronic shoreline retreat currently threatens critical launch infrastructure, but the spatial (alongshore) pattern of this hazard has not been well documented. During a 5-year monitoring campaign (2009-2014), 86 monthly and rapid-response RTK GPS surveys were completed along this 11 km-long coastal reach in order to monitor and characterize shoreline change and identify links between ocean forcing and beach morphology. Results indicate that the study area can be divided into four behaviorally-distinct alongshore regions based on seasonal variability in shoreline change, mediated by the complex offshore bathymetry of the Cape Canaveral shoals. In addition, seasonal erosion/accretion cycles are regularly interrupted by large erosive storm events, especially during the anomalous wave climates produced during winter Nor'Easter storms. An effective tool for analyzing multidimensional datasets like this one is Empirical Orthogonal Function (EOF) analysis, a technique to determine the dominant spatial and temporal signals within a dataset. Using this approach, it is possible to identify the main time and space scales (modes) along which coastal changes are occurring. Through correlation of these changes with oceanographic forcing mechanisms, we are enabled to infer the principal drivers of shoreline change at this site. Here, we document the results of EOF analysis applied to the Cape Canaveral shoreline change dataset, and further correlate the results of this analysis with oceanographic forcings in order to reveal the dominant modes as well as drivers of coastal variability along the central Atlantic coast of Florida. This EOF-based analysis, which is the first such analysis in the region, is shedding

Shoreline Changes at New Mangalore Port, India in the past and over future

Science.gov (United States)

Bharathan Radhamma, R.; Deo, M. C.

2016-12-01

The New Mangalore port is one of the major ports along the west coast of India. It is of artificial type with a pair of breakwaters constructed in phases from the year 1974 to 1996. The studies indicating the impact of constructing the breakwaters on adjacent shorelines after 1996 are difficult to find. The present work is aimed in this direction. For a 10 km stretch of the coast lying on both sides of the breakwaters 35 transects were constructed and shorelines were delineated from 4 satellite imageries that were recorded over the past 36 years at around 12 years' interval. Over each transect the rate of change of shoreline was calculated using linear regression and its adequacy was checked using the error statistics of R2 and RMSE. After such satisfactory cross-check, shorelines were predicted over the 12 and 36 years in future, i. e., in the years: 2028 and 2051. The patches undergoing erosion as well as accretion were identified. It was found that the rate of shoreline shifts fluctuated from -1.69 ± 0.45 m/year to 2.56 ± 0.45 m/year and about 52.28 % of the study area underwent substantial erosion. Most of the transects located toward north of the northern breakwater saw pro-gradation while those sited at south of the southern breakwater exhibited chronic erosion. The human interventions and presence of artificial structures accelerated the changes in the shoreline and also gave rise to higher uncertainties. The paper will present full details of the methodology, results and their interpretation.

Automatic Detection of Decadal Shoreline Change on Northern Coastal of Gresik, East Java - Indonesia

Science.gov (United States)

Fuad, M. A. Z.; A, M. Fais D.

2017-12-01

The Coastal zone is a dynamic region that has high environmental and economic values. This present research focuses on the analyzing the rate of shoreline change using multi-temporal Landsat Imagery and Digital Shoreline Analysis Systems (DSAS) along the northern part of Gresik coastal area, East Java Indonesia. Five village were selected for analysis; Campurejo, Dalegan, Prupuh, Ngemboh, and Banyuurip. Erosion and Accretion were observed and detected on Multi-temporal satellite Images along the area of interest from 1972 - 2016. Landsat Images were radiometrically and geometrically corrected before using for analysis. Coastline delineation for each Landsat image was performed by MNDWI method before digitized for quantitative shoreline change analysis. DSAS was performed for quantitative analysis of Net Shoreline Movement (NSM) and End Point Rate (EPR). The results indicate that in the study area accretion and abrasion was occurred, but overall abrasion was dominated than accretion. The remarkable shoreline changes were observed in the entire region. The highest abrasion area was occurred in Ngemboh village. From 1972 to 2016, coastline was retreat 242.56 meter to the land and the rate of movement was -5.54m/yr. In contrast, Campurejo area was relatively stable due to the introduction of manmade structure, i.e. Jetty and Groin. The Shoreline movement and the rate of movement in this area were -6.11m and -0.12 m/yr respectively. The research represents an important step in understanding the dynamics of coastal area in this area. By identification and analysis of coastline evolution, the stake holder could perform a scenario for reducing the risk of coastal erosion and minimize the social and economic lost.

Shoreline change after 12 years of tsunami in Banda Aceh, Indonesia: a multi-resolution, multi-temporal satellite data and GIS approach

Science.gov (United States)

Sugianto, S.; Heriansyah; Darusman; Rusdi, M.; Karim, A.

2018-04-01

The Indian Ocean Tsunami event on the 26 December 2004 has caused severe damage of some shorelines in Banda Aceh City, Indonesia. Tracing back the impact can be seen using remote sensing data combined with GIS. The approach is incorporated with image processing to analyze the extent of shoreline changes with multi-temporal data after 12 years of tsunami. This study demonstrates multi-resolution and multi-temporal satellite images of QuickBird and IKONOS to demarcate the shoreline of Banda Aceh shoreline from before and after tsunami. The research has demonstrated a significant change to the shoreline in the form of abrasion between 2004 and 2005 from few meters to hundred meters’ change. The change between 2004 and 2011 has not returned to the previous stage of shoreline before the tsunami, considered post tsunami impact. The abrasion occurs between 18.3 to 194.93 meters. Further, the change in 2009-2011 shows slowly change of shoreline of Banda Aceh, considered without impact of tsunami e.g. abrasion caused by ocean waves that erode the coast and on specific areas accretion occurs caused by sediment carried by the river flow into the sea near the shoreline of the study area.

Climate change hotspots in the CMIP5 global climate model ensemble.

Science.gov (United States)

Diffenbaugh, Noah S; Giorgi, Filippo

2012-01-10

We use a statistical metric of multi-dimensional climate change to quantify the emergence of global climate change hotspots in the CMIP5 climate model ensemble. Our hotspot metric extends previous work through the inclusion of extreme seasonal temperature and precipitation, which exert critical influence on climate change impacts. The results identify areas of the Amazon, the Sahel and tropical West Africa, Indonesia, and the Tibetan Plateau as persistent regional climate change hotspots throughout the 21 st century of the RCP8.5 and RCP4.5 forcing pathways. In addition, areas of southern Africa, the Mediterranean, the Arctic, and Central America/western North America also emerge as prominent regional climate change hotspots in response to intermediate and high levels of forcing. Comparisons of different periods of the two forcing pathways suggest that the pattern of aggregate change is fairly robust to the level of global warming below approximately 2°C of global warming (relative to the late-20 th -century baseline), but not at the higher levels of global warming that occur in the late-21 st -century period of the RCP8.5 pathway, with areas of southern Africa, the Mediterranean, and the Arctic exhibiting particular intensification of relative aggregate climate change in response to high levels of forcing. Although specific impacts will clearly be shaped by the interaction of climate change with human and biological vulnerabilities, our identification of climate change hotspots can help to inform mitigation and adaptation decisions by quantifying the rate, magnitude and causes of the aggregate climate response in different parts of the world.

Living Shorelines: Assessing Geomorphic Change and Water Quality in an Urban Waterway

Science.gov (United States)

Huggins, A.; Schwartz, M. C.; Schmutz, P. P.

2017-12-01

In recent years, alternative strategies for shoreline armoring have become increasingly popular with coastal property owners. In Northwest Florida, local agencies implemented plans to attenuate wave action and reduce landward shore recession in an urban bayou by installing living shorelines. Living shorelines are constructed in the inter-tidal zones and incorporate both hard and soft structured stabilization. Generally, the hard component is fossilized oyster shells and the soft component is planted intertidal vegetation, such as Spartina alterniflora (Smooth cordgrass) and Juncus roemererianus (Black needlerush). Living shorelines were intended to comprise both ecological and societal implications by significantly slowing erosion processes for property owners, by utilizing oyster beds to improve water quality, and by fostering new ecological habitats in the marsh grasses. The issue presented with living shoreline management is long-term studies have not been carried out on these engineered systems. For this study, geospatial technology was utilized to create 3D images of terrain by interpolation of data points using a TotalStation to compute geomorphic change. Additionally, water samples were analyzed using traditional wet chemistry laboratory methods to determine total oxidized nitrogen (TON), ammonium, and orthophosphate content in water. Over a short three-month preliminary study, sediment accretion was observed primarily within the vegetation with the bulk of the erosion occurring around the oyster beds. TON was detected at levels between 10 µM and 30 µM, ammonium up to 5 µM, and orthophosphate was only detected in very low levels, consistently quality data will be used to establish baseline data for future research to determine volumetric geomorphic change,and to set a standard for water quality trends, surrounding oyster beds and vegetation in response to climatic events.

A model integrating longshore and cross-shore processes for predicting long-term shoreline response to climate change

Science.gov (United States)

Vitousek, Sean; Barnard, Patrick; Limber, Patrick W.; Erikson, Li; Cole, Blake

2017-01-01

We present a shoreline change model for coastal hazard assessment and management planning. The model, CoSMoS-COAST (Coastal One-line Assimilated Simulation Tool), is a transect-based, one-line model that predicts short-term and long-term shoreline response to climate change in the 21st century. The proposed model represents a novel, modular synthesis of process-based models of coastline evolution due to longshore and cross-shore transport by waves and sea-level rise. Additionally, the model uses an extended Kalman filter for data assimilation of historical shoreline positions to improve estimates of model parameters and thereby improve confidence in long-term predictions. We apply CoSMoS-COAST to simulate sandy shoreline evolution along 500 km of coastline in Southern California, which hosts complex mixtures of beach settings variably backed by dunes, bluffs, cliffs, estuaries, river mouths, and urban infrastructure, providing applicability of the model to virtually any coastal setting. Aided by data assimilation, the model is able to reproduce the observed signal of seasonal shoreline change for the hindcast period of 1995-2010, showing excellent agreement between modeled and observed beach states. The skill of the model during the hindcast period improves confidence in the model's predictive capability when applied to the forecast period (2010-2100) driven by GCM-projected wave and sea-level conditions. Predictions of shoreline change with limited human intervention indicate that 31% to 67% of Southern California beaches may become completely eroded by 2100 under sea-level rise scenarios of 0.93 to 2.0 m.

Decadal changes in the land use/land cover and shoreline along the coastal districts of southern Gujarat, India.

Science.gov (United States)

Misra, A; Balaji, R

2015-07-01

The coastal zone along the districts of Surat, Navsari, and Valsad in southern Gujarat, India, is reported to be facing serious environmental challenges in the form of shoreline erosion, wetland loss, and man-made encroachments. This study assesses the decadal land use/ land cover (LULC) changes in these three districts for the years 1990, 2001, and 2014 using satellite datasets of Landsat TM, ETM, and OLI. The LULC changes are identified by using band ratios as a pre-classification step, followed by implementation of hybrid classification (a combination of supervised and unsupervised classification). An accuracy assessment is carried out for each dataset, and the overall accuracy ranges from 90 to 95%. It is observed that the spatial extents of aquaculture, urban built-up, and barren classes have appreciated over time, whereas the coverage of mudflats has depreciated due to rapid urbanization. The changes in the shoreline of these districts have also been analyzed for the same years, and significant changes are found in the form of shoreline erosion. The LULC maps prepared as well as the shoreline change analysis done for this study area will enable the local decision makers to adopt better land-use planning and shoreline protection measures, which will further aid in sustainable future developments in this region.

Observations and 3D hydrodynamics-based modeling of decadal-scale shoreline change along the Outer Banks, North Carolina

Science.gov (United States)

Safak, Ilgar; List, Jeffrey; Warner, John C.; Kumar, Nirnimesh

2017-01-01

Long-term decadal-scale shoreline change is an important parameter for quantifying the stability of coastal systems. The decadal-scale coastal change is controlled by processes that occur on short time scales (such as storms) and long-term processes (such as prevailing waves). The ability to predict decadal-scale shoreline change is not well established and the fundamental physical processes controlling this change are not well understood. Here we investigate the processes that create large-scale long-term shoreline change along the Outer Banks of North Carolina, an uninterrupted 60 km stretch of coastline, using both observations and a numerical modeling approach. Shoreline positions for a 24-yr period were derived from aerial photographs of the Outer Banks. Analysis of the shoreline position data showed that, although variable, the shoreline eroded an average of 1.5 m/yr throughout this period. The modeling approach uses a three-dimensional hydrodynamics-based numerical model coupled to a spectral wave model and simulates the full 24-yr time period on a spatial grid running on a short (second scale) time-step to compute the sediment transport patterns. The observations and the model results show similar magnitudes (O(105 m3/yr)) and patterns of alongshore sediment fluxes. Both the observed and the modeled alongshore sediment transport rates have more rapid changes at the north of our section due to continuously curving coastline, and possible effects of alongshore variations in shelf bathymetry. The southern section with a relatively uniform orientation, on the other hand, has less rapid transport rate changes. Alongshore gradients of the modeled sediment fluxes are translated into shoreline change rates that have agreement in some locations but vary in others. Differences between observations and model results are potentially influenced by geologic framework processes not included in the model. Both the observations and the model results show higher rates of

Spatio-temporal evolution of shoreline changes along the coast between sousse- Monastir (Eastearn of Tunisia)

Science.gov (United States)

Fathallah, S.; Ben Amor, R.; Gueddari, M.

2009-04-01

Spatio-temporal evolution of shoreline Changes along the coast between Sousse-Monastir (Eastern of Tunisia). Safa Fathallah*, Rim Ben Amor and Moncef Gueddari Unit of Research of Geochemistry and Environmental Geology. Faculty of Science of Tunis, University of Tunis El Manar, 2092. (*) Corresponding author: safa_fathallah@yahoo.fr The coast of Sousse-Monastir in eastern of Tunisia, has undergone great changes, due to natural and anthropic factors. Increasing human use, the construction of two ports and coastal urbanization (hotels and industries) has accelerated the erosion process. The coastal defense structures (breakwaters and enrockment), built to protect the most eroded zone are efficient, but eroded zones appeared in the southern part of breakwaters. Recent and historic aerial photography was used to estimate, observe, and analyze past shoreline and bathymetric positions and trends involving shore evolution for Sousse-Monastir coast. All of the photographs were calibrated and mosaicked by Arc Map Gis 9.1, the years used are 1925, 1962, 1988, 1996, and 2001 for shoreline change analysis and 1884 and 2001 for bathymetric changes. The analyze of this photographs show that the zone located at the south of breakwater are mostly eroded with high speed process (2m/year). Another zone appears as eroded at the south part of Hamdoun River, with 1,5m/year erosion speed . Keywords: Shoreline evolution, defense structures, Sousse-Monastir coast, Tunisia.

Application of the AMBUR R package for spatio-temporal analysis of shoreline change: Jekyll Island, Georgia, USA

Science.gov (United States)

Jackson, Chester W.; Alexander, Clark R.; Bush, David M.

2012-04-01

The AMBUR (Analyzing Moving Boundaries Using R) package for the R software environment provides a collection of functions for assisting with analyzing and visualizing historical shoreline change. The package allows import and export of geospatial data in ESRI shapefile format, which is compatible with most commercial and open-source GIS software. The "baseline and transect" method is the primary technique used to quantify distances and rates of shoreline movement, and to detect classification changes across time. Along with the traditional "perpendicular" transect method, two new transect methods, "near" and "filtered," assist with quantifying changes along curved shorelines that are problematic for perpendicular transect methods. Output from the analyses includes data tables, graphics, and geospatial data, which are useful in rapidly assessing trends and potential errors in the dataset. A forecasting function also allows the user to estimate the future location of the shoreline and store the results in a shapefile. Other utilities and tools provided in the package assist with preparing and manipulating geospatial data, error checking, and generating supporting graphics and shapefiles. The package can be customized to perform additional statistical, graphical, and geospatial functions, and, it is capable of analyzing the movement of any boundary (e.g., shorelines, glacier terminus, fire edge, and marine and terrestrial ecozones).

Anthropogenic effects on shoreface and shoreline changes: Input from a multi-method analysis, Agadir Bay, Morocco

Science.gov (United States)

Aouiche, Ismail; Daoudi, Lahcen; Anthony, Edward J.; Sedrati, Mouncef; Ziane, Elhassane; Harti, Abderrazak; Dussouillez, Philippe

2016-02-01

In many situations, the links between shoreline fluctuations and larger-scale coastal change embracing the shoreface are not always well understood. In particular, meso-scale (years to decades) sand exchanges between the shoreface and the shoreline, considered as important on many wave-dominated coasts, are rather poorly understood and difficult to identify. Coastal systems where sediment transport is perturbed by engineering interventions on the shoreline and shoreface commonly provide fine examples liable to throw light on these links. This is especially so where shoreface bathymetric datasets, which are generally lacking, are collected over time, enabling more or less fine resolution of the meso-scale coastal sediment budget. Agadir Bay and the city of Agadir together form one of the two most important economic development poles on the Atlantic coast of Morocco. Using a combined methodological approach based on wave-current modelling, bathymetric chart-differencing, determination of shoreline fluctuations, and beach topographic surveying, we highlight the close links between variations in the bed of the inner shoreface and the bay shoreline involving both cross-shore and longshore sand transport pathways, sediment budget variations and new sediment cell patterns. We show that the significant changes that have affected the bay shoreline and shoreface since 1978 clearly reflect anthropogenic impacts, notably blocking of alongshore sand transport by Agadir harbour, completed in 1988, and the foundations of which lie well beyond the depth of wave closure. Construction of the harbour has led to the creation of a rapidly accreting beach against an original portion of rocky shoreline updrift and to a net sand loss exceeding 145,000 m3/year between 1978 and 2012 over 8.5 km2of the bay shoreface downdrift. Shoreline retreat has been further exacerbated by sand extraction from aeolian dunes and by flattening of these dunes to make space for tourist infrastructure. Digital

Shoreline changes in reef islands of the Central Pacific: Takapoto Atoll, Northern Tuamotu, French Polynesia

Science.gov (United States)

Duvat, Virginie K. E.; Pillet, Valentin

2017-04-01

Atoll reef islands are considered highly vulnerable to the impacts of climate change. While accelerated sea-level rise is expected to destabilize reef islands, ocean warming and acidification are considered as major threats to coral reef growth, which is of primary importance for the persistence of islands and of food supply to islanders. Using multi-date aerial imagery, shoreline and island changes between 1969 and 2013 were assessed on Takapoto Atoll, Northern Tuamotu region, in French Polynesia. Results show that over the 44-year study period, 41% of islands were stable in area while 33% expanded and 26% contracted. Island expansion was the dominant mode of change on the leeward side of the atoll. Tropical Cyclone Orama (category 3, 1983) contributed to shoreline and island change on the windward side of the atoll through the reworking of previous storm deposits and the injection of fresh sediments in the island system (with up to 62% of an island's land area being covered with fresh sediments). Human activities contributed significantly to shoreline and island change throughout the atoll through infrastructure construction, the removal of the indigenous vegetation from a number of islets and sediment mining.

Multidecadal (1960–2011 shoreline changes in Isbjørnhamna (Hornsund, Svalbard

Directory of Open Access Journals (Sweden)

Zagórski Piotr

2015-12-01

Full Text Available A section of a gravel-dominated coast in Isbjørnhamna (Hornsund, Svalbard was analysed to calculate the rate of shoreline changes and explain processes controlling coastal zone development over last 50 years. Between 1960 and 2011, coastal landscape of Isbjørnhamna experienced a significant shift from dominated by influence of tide-water glacier and protected by prolonged sea-ice conditions towards storm-affected and rapidly changing coast. Information derived from analyses of aerial images and geomorphological mapping shows that the Isbjørnhamna coastal zone is dominated by coastal erosion resulting in a shore area reduction of more than 31,600 m2. With ~3,500 m2 of local aggradation, the general balance of changes in the study area of the shore is negative, and amounts to a loss of more than 28,000 m2. Mean shoreline change is −13.1 m (−0.26 m a−1. Erosional processes threaten the Polish Polar Station infrastructure and may damage of one of the storage buildings in nearby future.

Shoreline response to detached breakwaters in prototype

NARCIS (Netherlands)

Khuong, T.C.

2016-01-01

An accurate prediction of shoreline changes behind detached breakwaters is, in regard to the adjustment to the environmental impact, still a challenge for designers and coastal managers. This research is expected to fill the gaps in the estimation of shoreline changes by developing new and

Coupling centennial-scale shoreline change to sea-level rise and coastal morphology in the Gulf of Mexico using a Bayesian network

Science.gov (United States)

Plant, Nathaniel G.

2016-01-01

Predictions of coastal evolution driven by episodic and persistent processes associated with storms and relative sea-level rise (SLR) are required to test our understanding, evaluate our predictive capability, and to provide guidance for coastal management decisions. Previous work demonstrated that the spatial variability of long-term shoreline change can be predicted using observed SLR rates, tide range, wave height, coastal slope, and a characterization of the geomorphic setting. The shoreline is not suf- ficient to indicate which processes are important in causing shoreline change, such as overwash that depends on coastal dune elevations. Predicting dune height is intrinsically important to assess future storm vulnerability. Here, we enhance shoreline-change predictions by including dune height as a vari- able in a statistical modeling approach. Dune height can also be used as an input variable, but it does not improve the shoreline-change prediction skill. Dune-height input does help to reduce prediction uncer- tainty. That is, by including dune height, the prediction is more precise but not more accurate. Comparing hindcast evaluations, better predictive skill was found when predicting dune height (0.8) compared with shoreline change (0.6). The skill depends on the level of detail of the model and we identify an optimized model that has high skill and minimal overfitting. The predictive model can be implemented with a range of forecast scenarios, and we illustrate the impacts of a higher future sea-level. This scenario shows that the shoreline change becomes increasingly erosional and more uncertain. Predicted dune heights are lower and the dune height uncertainty decreases.

Coral reefs as the first line of defense: Shoreline protection in face of climate change.

Science.gov (United States)

Elliff, Carla I; Silva, Iracema R

2017-06-01

Coral reefs are responsible for a wide array of ecosystem services including shoreline protection. However, the processes involved in delivering this particular service have not been fully understood. The objective of the present review was to compile the main results in the literature regarding the study of shoreline protection delivered by coral reefs, identifying the main threats climate change imposes to the service, and discuss mitigation and recovery strategies that can and have been applied to these ecosystems. While different zones of a reef have been associated with different levels of wave energy and wave height attenuation, more information is still needed regarding the capacity of different reef morphologies to deliver shoreline protection. Moreover, the synergy between the main threats imposed by climate change to coral reefs has also not been thoroughly investigated. Recovery strategies are being tested and while there are numerous mitigation options, the challenge remains as to how to implement them and monitor their efficacy. Copyright © 2017 Elsevier Ltd. All rights reserved.

Ideas from the global climate change hotspot research | IDRC ...

International Development Research Centre (IDRC) Digital Library (Canada)

2017-05-09

May 9, 2017 ... Ideas from the global climate change hotspot research ... The Collaborative Adaptation Research Initiative in Africa and Asia (CARIAA) ... the decisions they need to make about investment choices and development options, ...

Hotspots Definition Study

International Nuclear Information System (INIS)

De Pater, F.; Brinkman, S.; Schellekens, E.

2010-03-01

In the Dutch research programme Climate changes Spatial Planning (CcSP) many scientific projects are carried out. They often take a multidisciplinary approach to the climate issue. However, more attention needed to be given to embedding the programme into practice. Therefore, the board decided to start a hotspot programme. A hotspot was defined as a pilot project in a sector, place or region in which spatial planning and climate change play an important role in the physical shape and land use of the area and where conflicts of interest are found between these and other factors. The hotspot programme started with a definition study. This report is the result of this study. The goal of the study was to identify, describe and evaluate possible hotspots. In two workshops with policy-makers from national and regional governments, consultancy firms and nature conservation organizations, a large number of potential hotspots were identified. Fifteen were selected after the workshops took place and described in detail. The selection was done using a set of conditional criteria, criteria that all had to be met. Two potential hotspots were withdrawn after the selection. Since the Board of the CcSP programme expressed its interest in financing six to seven hotspots, a prioritization was made, using prioritizing criteria. Also the potential hotspots were assessed looking at regional distribution, thematic coverage and target groups. After this assessment and an analysis of the hotspots taking some other factors into account (eg. some hotspots were very similar or one could easily be incorporated in another one) five hotspots were selected: Kampen, Biesbosch-Haringvliet, Zuidplaspolder, Delta Waters and Tilburg. Options to fill the last two places were: Grounds for Change, Noordoostpolder, Oude Vaart Valley and Arnhem/Nijmegen (KAN). For these remaining potential hotspots draft terms of reference were drawn as basis for a project proposals. These terms of reference are added to

Future habitat loss and extinctions driven by land-use change in biodiversity hotspots under four scenarios of climate-change mitigation.

Science.gov (United States)

Jantz, Samuel M; Barker, Brian; Brooks, Thomas M; Chini, Louise P; Huang, Qiongyu; Moore, Rachel M; Noel, Jacob; Hurtt, George C

2015-08-01

Numerous species have been pushed into extinction as an increasing portion of Earth's land surface has been appropriated for human enterprise. In the future, global biodiversity will be affected by both climate change and land-use change, the latter of which is currently the primary driver of species extinctions. How societies address climate change will critically affect biodiversity because climate-change mitigation policies will reduce direct climate-change impacts; however, these policies will influence land-use decisions, which could have negative impacts on habitat for a substantial number of species. We assessed the potential impact future climate policy could have on the loss of habitable area in biodiversity hotspots due to associated land-use changes. We estimated past extinctions from historical land-use changes (1500-2005) based on the global gridded land-use data used for the Intergovernmental Panel on Climate Change Fifth Assessment Report and habitat extent and species data for each hotspot. We then estimated potential extinctions due to future land-use changes under alternative climate-change scenarios (2005-2100). Future land-use changes are projected to reduce natural vegetative cover by 26-58% in the hotspots. As a consequence, the number of additional species extinctions, relative to those already incurred between 1500 and 2005, due to land-use change by 2100 across all hotspots ranged from about 220 to 21000 (0.2% to 16%), depending on the climate-change mitigation scenario and biological factors such as the slope of the species-area relationship and the contribution of wood harvest to extinctions. These estimates of potential future extinctions were driven by land-use change only and likely would have been higher if the direct effects of climate change had been considered. Future extinctions could potentially be reduced by incorporating habitat preservation into scenario development to reduce projected future land-use changes in hotspots or by

SPATIO-TEMPORAL ANALYSIS OF SHORELINE CHANGES IN ...

African Journals Online (AJOL)

Osondu

2011-12-05

Dec 5, 2011 ... The study recommended periodic monitoring of the coastal area on monthly and yearly bases. Keywords: Shoreline, GIS, Remote sensing, Bonny Island, Water transport, .... imported to Arcview GIS 3.3 for enhancement.

A numerical shoreline model for shorelines with large curvature

DEFF Research Database (Denmark)

Kærgaard, Kasper Hauberg; Fredsøe, Jørgen

2013-01-01

orthogonal horizontal directions are used. The volume error in the sediment continuity equation which is thereby introduced is removed through an iterative procedure. The model treats the shoreline changes by computing the sediment transport in a 2D coastal area model, and then integrating the sediment...

Reservoir shorelines : a methodology for evaluating operational impacts

Energy Technology Data Exchange (ETDEWEB)

Lawrence, M.; Braund-Read, J.; Musgrave, B. [BC Hydro, Burnaby, BC (Canada)

2009-07-01

BC Hydro has been operating hydroelectric facilities for over a century in British Columbia. The integrity and stability of the shorelines and slopes bordering hydroelectric reservoirs is affected by changing water levels in the reservoir, natural processes of flooding, wind and wave action and modification of groundwater levels. Establishing setbacks landward of the shoreline are needed in order to protect useable shoreline property that may be at risk of flooding, erosion or instability due to reservoir operations. Many of the reservoirs in British Columbia are situated in steep, glaciated valleys with diverse geological, geomorphological and climatic conditions and a variety of eroding shorelines. As such, geotechnical studies are needed to determine the operational impacts on reservoir shorelines. Since the 1960s BC Hydro has been developing a methodology for evaluating reservoir impacts and determining the land around the reservoir perimeter that should remain as a right of way for operations while safeguarding waterfront development. The methodology was modified in the 1990s to include geomorphological and geological processes. However, uncertainties in the methodology still exist due to limited understanding of key issues such as rates of erosion and shoreline regression, immaturity of present day reservoir shorelines and impacts of climate change. 11 refs., 1 tab., 7 figs.

Threats from climate change to terrestrial vertebrate hotspots in Europe.

Science.gov (United States)

Maiorano, Luigi; Amori, Giovanni; Capula, Massimo; Falcucci, Alessandra; Masi, Monica; Montemaggiori, Alessandro; Pottier, Julien; Psomas, Achilleas; Rondinini, Carlo; Russo, Danilo; Zimmermann, Niklaus E; Boitani, Luigi; Guisan, Antoine

2013-01-01

We identified hotspots of terrestrial vertebrate species diversity in Europe and adjacent islands. Moreover, we assessed the extent to which by the end of the 21(st) century such hotspots will be exposed to average monthly temperature and precipitation patterns which can be regarded as extreme if compared to the climate experienced during 1950-2000. In particular, we considered the entire European sub-continent plus Turkey and a total of 1149 species of terrestrial vertebrates. For each species, we developed species-specific expert-based distribution models (validated against field data) which we used to calculate species richness maps for mammals, breeding birds, amphibians, and reptiles. Considering four global circulation model outputs and three emission scenarios, we generated an index of risk of exposure to extreme climates, and we used a bivariate local Moran's I to identify the areas with a significant association between hotspots of diversity and high risk of exposure to extreme climates. Our results outline that the Mediterranean basin represents both an important hotspot for biodiversity and especially for threatened species for all taxa. In particular, the Iberian and Italian peninsulas host particularly high species richness as measured over all groups, while the eastern Mediterranean basin is particularly rich in amphibians and reptiles; the islands (both Macaronesian and Mediterranean) host the highest richness of threatened species for all taxa occurs. Our results suggest that the main hotspots of biodiversity for terrestrial vertebrates may be extensively influenced by the climate change projected to occur over the coming decades, especially in the Mediterranean bioregion, posing serious concerns for biodiversity conservation.

Extended Kalman Filter framework for forecasting shoreline evolution

Science.gov (United States)

Long, Joseph; Plant, Nathaniel G.

2012-01-01

A shoreline change model incorporating both long- and short-term evolution is integrated into a data assimilation framework that uses sparse observations to generate an updated forecast of shoreline position and to estimate unobserved geophysical variables and model parameters. Application of the assimilation algorithm provides quantitative statistical estimates of combined model-data forecast uncertainty which is crucial for developing hazard vulnerability assessments, evaluation of prediction skill, and identifying future data collection needs. Significant attention is given to the estimation of four non-observable parameter values and separating two scales of shoreline evolution using only one observable morphological quantity (i.e. shoreline position).

Projected atoll shoreline and run-up changes in response to sea-level rise and varying large wave conditions at Wake and Midway Atolls, Northwestern Hawaiian Islands

Science.gov (United States)

Shope, James B.; Storlazzi, Curt; Hoeke, Ron

2017-01-01

Atoll islands are dynamic features that respond to seasonal alterations in wave conditions and sea level. It is unclear how shoreline wave run-up and erosion patterns along these low elevation islands will respond to projected sea-level rise (SLR) and changes in wave climate over the next century, hindering communities' preparation for the future. To elucidate how these processes may respond to climate change, extreme boreal winter and summer wave conditions under future sea-level rise (SLR) and wave climate scenarios were simulated at two atolls, Wake and Midway, using a shallow-water hydrodynamic model. Nearshore wave conditions were used to compute the potential longshore sediment flux along island shorelines via the CERC empirical formula and wave-driven erosion was calculated as the divergence of the longshore drift; run-up and the locations where the run-up exceed the berm elevation were also determined. SLR is projected to predominantly drive future island morphological change and flooding. Seaward shorelines (i.e., ocean fronted shorelines directly facing incident wave energy) were projected to experience greater erosion and flooding with SLR and in hypothetical scenarios where changes to deep water wave directions were altered, as informed by previous climate change forced Pacific wave modeling efforts. These changes caused nearshore waves to become more shore-normal, increasing wave attack along previously protected shorelines. With SLR, leeward shorelines (i.e., an ocean facing shoreline but sheltered from incident wave energy) became more accretive on windward islands and marginally more erosive along leeward islands. These shorelines became more accretionary and subject to more flooding with nearshore waves becoming more shore-normal. Lagoon shorelines demonstrated the greatest SLR-driven increase in erosion and run-up. They exhibited the greatest relative change with increasing wave heights where both erosion and run-up magnitudes increased. Wider

Projected atoll shoreline and run-up changes in response to sea-level rise and varying large wave conditions at Wake and Midway Atolls, Northwestern Hawaiian Islands

Science.gov (United States)

Shope, James B.; Storlazzi, Curt D.; Hoeke, Ron K.

2017-10-01

Atoll islands are dynamic features that respond to seasonal alterations in wave conditions and sea level. It is unclear how shoreline wave run-up and erosion patterns along these low elevation islands will respond to projected sea-level rise (SLR) and changes in wave climate over the next century, hindering communities' preparation for the future. To elucidate how these processes may respond to climate change, extreme boreal winter and summer wave conditions under future sea-level rise (SLR) and wave climate scenarios were simulated at two atolls, Wake and Midway, using a shallow-water hydrodynamic model. Nearshore wave conditions were used to compute the potential longshore sediment flux along island shorelines via the CERC empirical formula and wave-driven erosion was calculated as the divergence of the longshore drift; run-up and the locations where the run-up exceed the berm elevation were also determined. SLR is projected to predominantly drive future island morphological change and flooding. Seaward shorelines (i.e., ocean fronted shorelines directly facing incident wave energy) were projected to experience greater erosion and flooding with SLR and in hypothetical scenarios where changes to deep water wave directions were altered, as informed by previous climate change forced Pacific wave modeling efforts. These changes caused nearshore waves to become more shore-normal, increasing wave attack along previously protected shorelines. With SLR, leeward shorelines (i.e., an ocean facing shoreline but sheltered from incident wave energy) became more accretive on windward islands and marginally more erosive along leeward islands. These shorelines became more accretionary and subject to more flooding with nearshore waves becoming more shore-normal. Lagoon shorelines demonstrated the greatest SLR-driven increase in erosion and run-up. They exhibited the greatest relative change with increasing wave heights where both erosion and run-up magnitudes increased. Wider

Mangroves and shoreline change on Molokai, Hawaii: Assessing the role of introduced Rhizophora mangle in sediment dynamics and coastal change using remote sensing and GIS

Science.gov (United States)

D'Iorio, Margaret Mary

The Florida red mangrove, Rhizophora mangle, was introduced to the high volcanic island of Molokai, Hawaii in 1902 to trap sediment and stabilize eroding coastal mudflats along the island's reef-fringed south coast. This prolific invasive species now occupies 2.4 km2 of inter-tidal land and borders approximately 20% of the south coast shoreline. Integrating the fundamentals of remote sensing and Geographical Information Systems, this research investigates the effects of mangrove introduction on sediment dynamics and coastal change on south Molokai throughout the 20th century and provides a baseline of mangrove distribution, a detailed record of shoreline change rates, and a chronological history of island land use and environmental change. Monitoring of coastal change associated with mangroves is essential to understanding how natural coastal ecosystems react to alien species introductions and adapt overall to changing climatic regimes. Comparing the accuracy of various remote sensing instruments and processing techniques, this study has shown that the remote sensing with modern airborne and satellite sensors offers an effective management tool for mapping baseline conditions and monitoring change in remote island environments like that on the south coast of Molokai. Shoreline change assessment found that shoreline change rates on the island's south coast varied both alongshore and through time and that the dominant change has been one of progradation. Rates of change peaked in the early part of the 20th century and have since decayed exponentially over time. Changing land use practices coupled with the introduction of invasive species may have strongly influenced observed variability in rates of coastal change. Field observations and sediment analysis suggest that sediment transfer across the coastal boundary on the mangrove-fringed south coast is relatively limited and appears to be mainly event-driven. For shallow, reef-fringed, coastal regions vulnerable to

Hurricane impact and recovery shoreline change analysis of the Chandeleur Islands, Louisiana, USA: 1855 to 2005

Science.gov (United States)

Fearnley, Sarah Mary; Miner, Michael D.; Kulp, Mark; Bohling, Carl; Penland, Shea

2009-12-01

Results from historical (1855-2005) shoreline change analysis conducted along the Chandeleur Islands, Louisiana demonstrate that tropical cyclone frequency dominates the long-term evolution of this barrier island chain. Island area decreased at a rate of -0.16 km2/year for the relatively quiescent time period up until 1996, when an increase in tropical cyclone frequency accelerated this island area reduction to a rate of -1.01 km2/year. More frequent hurricanes also affected shoreline retreat rates, which increased from -11.4 m/year between 1922 and 1996 to -41.9 m/year between 1982 and 2005. The erosional impact caused by the passage of Hurricane Katrina in 2005 was unprecedented. Between 2004 and 2005, the shoreline of the northern islands retreated -201.5 m/year, compared with an average retreat rate of -38.4 m/year between 1922 and 2004. A linear regression analysis of shoreline change predicts that, as early as 2013, the backbarrier marsh that serves to stabilize the barrier island chain will be completely destroyed if storm frequency observed during the past decade persists. If storm frequency decreases to pre-1996 recurrence intervals, the backbarrier marsh is predicted to remain until 2037. Southern portions of the barrier island chain where backbarrier marsh is now absent behave as ephemeral islands that are destroyed after storm impacts and reemerge during extended periods of calm weather, a coastal behavior that will eventually characterize the entire island chain.

Drivers of shoreline change in atoll reef islands of the Tuamotu Archipelago, French Polynesia

Science.gov (United States)

Duvat, Virginie K. E.; Salvat, Bernard; Salmon, Camille

2017-11-01

This paper increases by around 30% the sample of atoll reef islands studied from a shoreline change perspective, and covers an under-studied geographical area, i.e. the French Tuamotu Archipelago. It brings new irrefutable evidences on the persistence of reef islands over the last decades, as 77% of the 111 study islands exhibited areal stability while 15% and 8% showed expansion and contraction, respectively. This paper also addresses a key research gap by interpreting the major local drivers controlling recent shoreline and island change, i.e. tropical cyclones and seasonal swells, sediment supply by coral reefs and human activities. The 1983 tropical cyclones had contrasting impacts, depending on the shoreline indicator considered. While they generally caused a marked retreat of the stability line, the base of the beach advanced at some locations, as a result of either sediment reworking or fresh sediment inputs. The post-cyclone fair weather period was characterised by reversed trends indicating island morphological readjustment. Cyclonic waves contributed to island upwards growth, which reached up to 1 m in places, through the transfer of sediments up onto the island surface. However, the steep outer slopes of atolls limited sediment transfers to the reef flat and island system. We found that 57% of the study islands are disturbed by human activities, including 'rural' and uninhabited islands. Twenty-six percent of these islands have lost the capacity to respond to ocean-climate related pressures, including the 'capital' islands concentrating atolls' population, infrastructures and economic activities, which is preoccupying under climate change.

Observations of Interannual Dune Morphological Evolution With Comparisons to Shoreline Change Along the Columbia River Littoral Cell

Science.gov (United States)

Doermann, L.; Kaminsky, G. M.; Ruggiero, P.

2006-12-01

Beach topographic data have been collected along the 160 km-long Columbia River Littoral Cell in southwest Washington and northwest Oregon, USA as part of the Southwest Washington Coastal Erosion Study and a NANOOS pilot project. The monitoring program includes the collection of cross-shore beach profiles at 49 sites for each of the 34 seasons since 1997 (with few exceptions), enabling the investigation of the seasonal to interannual morphological variability of this high-energy coast. We focus here on the dunes backing the beaches, aiming to quantitatively describe the wide variety of characteristics they exhibit, as well as to relate dune evolution to shoreline change. To analyze the large volume of high-quality data, we use automated algorithms and systematic processes to identify the location of the dune toe, crest, and face, and calculate a volume (where enough data are available) and beach width for each survey. We define the position of the dune face as the elevation half-way between the average dune toe and average dune crest elevations at each profile location, and beach width as the horizontal distance between the 2-m contour (~MSL) and the dune toe. Much like shoreline proxies lower on the beach profile, (e.g., the 3-m contour), the location of the dune toe shows large seasonal variability with onshore deposition of sand in summer months and offshore sand transport in the winter. However, the location of the dune face and the elevation of the dune crest are much less variable and are useful in describing the evolution of the dune/beach system in the horizontal and vertical directions, respectively, over interannual time scales. On beaches with the highest shoreline change rates in the study area, the dune face follows the progradational trend of the shoreline with the dune face prograding at approximately 25-50% of the rate of the shoreline. Along many of these beaches that experienced severe erosion during the El Niño of 1997/98, the dune face

Investigating Coastal Processes Responsible for Large-Scale Shoreline Responses to Human Shoreline Stabilization

Science.gov (United States)

Slott, J. M.; Murray, A. B.; Ashton, A. D.

2006-12-01

Human shoreline stabilization practices, such as beach nourishment (i.e. placing sand on an eroding beach), have become more prevalent as erosion threatens coastal communities. On sandy shorelines, recent experiments with a numerical model of shoreline change (Slott, et al., in press) indicate that moderate shifts in storminess patterns, one possible outcome of global warming, may accelerate the rate at which shorelines erode or accrete, by altering the angular distribution of approaching waves (the `wave climate'). Accelerated erosion would undoubtedly place greater demands on stabilization. Scientists and coastal engineers have typically only considered the site-specific consequences of shoreline stabilization; here we explore the coastal processes responsible for large-scale (10's kms) and long-term (decades) effects using a numerical model developed by Ashton, et al. (2001). In this numerical model, waves breaking at oblique angles drive a flux of sediment along the shoreline, where gradients in this flux can shape the coastline into surprisingly complex forms (e.g. cuspate-capes found on the Carolina coast). Wave "shadowing" plays a major role in shoreline evolution, whereby coastline features may block incoming waves from reaching distant parts. In this work, we include beach nourishment in the Ashton, et al. (2001) model. Using a cuspate-cape shoreline as our initial model condition, we conducted pairs of experiments and varied the wave-climate forcing across each pair, each representing different storminess scenarios. Here we report on one scenario featuring increased extra-tropical storm influence. For each experiment-pair we ran a control experiment with no shoreline stabilization and a second where a beach nourishment project stabilized a cape tip. By comparing the results of these two parallel runs, we isolate the tendency of the shoreline to migrate landward or seaward along the domain due solely to beach nourishment. Significant effects from beach

Biodiversity Hotspots, Climate Change, and Agricultural Development: Global Limits of Adaptation

Science.gov (United States)

Schneider, U. A.; Rasche, L.; Schmid, E.; Habel, J. C.

2017-12-01

Terrestrial ecosystems are threatened by climate and land management change. These changes result from complex and heterogeneous interactions of human activities and natural processes. Here, we study the potential change in pristine area in 33 global biodiversity hotspots within this century under four climate projections (representative concentration pathways) and associated population and income developments (shared socio-economic pathways). A coupled modelling framework computes the regional net expansion of crop and pasture lands as result of changes in food production and consumption. We use a biophysical crop simulation model to quantify climate change impacts on agricultural productivity, water, and nutrient emissions for alternative crop management systems in more than 100 thousand agricultural land polygons (homogeneous response units) and for each climate projection. The crop simulation model depicts detailed soil, weather, and management information and operates with a daily time step. We use time series of livestock statistics to link livestock production to feed and pasture requirements. On the food consumption side, we estimate national demand shifts in all countries by processing population and income growth projections through econometrically estimated Engel curves. Finally, we use a global agricultural sector optimization model to quantify the net change in pristine area in all biodiversity hotspots under different adaptation options. These options include full-scale global implementation of i) crop yield maximizing management without additional irrigation, ii) crop yield maximizing management with additional irrigation, iii) food yield maximizing crop mix adjustments, iv) food supply maximizing trade flow adjustments, v) healthy diets, and vi) combinations of the individual options above. Results quantify the regional potentials and limits of major agricultural producer and consumer adaptation options for the preservation of pristine areas in

Understanding Long-term, Large-scale Shoreline Change and the Sediment Budget on Fire Island, NY, using a 3D hydrodynamics-based model

Science.gov (United States)

List, J. H.; Safak, I.; Warner, J. C.; Schwab, W. C.; Hapke, C. J.; Lentz, E. E.

2016-02-01

The processes responsible for long-term (decadal) shoreline change and the related imbalance in the sediment budget on Fire Island, a 50 km long barrier island on the south coast of Long Island, NY, has been the subject of debate. The estimated net rate of sediment leaving the barrier at the west end of the island is approximately double the estimated net rate of sediment entering in the east, but the island-wide average sediment volume change associated with shoreline change is near zero and cannot account for this deficit. A long-held hypothesis is that onshore sediment flux from the inner continental shelf within the western half of the island is responsible for balancing the sediment budget. To investigate this possibility, we use a nested, 3-D, hydrodynamics-based modeling system (COAWST) to simulate the island-wide alongshore and cross-shore transport, in combination with shoreline change observations. The modeled, net alongshore transport gradients in the nearshore predict that the central part of Fire Island should be erosional, yet shoreline change observations show this area to be accretionary. We compare the model-predicted alongshore transport gradients with the flux gradients that would be required to generate the observed shoreline change, to give the pattern of sediment volume gains or losses that cannot be explained by the modeled alongshore transport gradients. Results show that the western 30 km of coast requires an input of sediment, supporting the hypothesis of onshore flux in this area. The modeled cross-shore flux of sediment between the shoreface and inner shelf is consistent these results, with onshore-directed bottom currents creating an environment more conducive to onshore sediment flux in the western 30 km of the island compared to the eastern 20 km. We conclude that the cross-shore flux of sediment can explain the shoreline change observations, and is an integral component of Fire Island's sediment budget.

Monitoring shoreline environment of Paradip, east coast of India using remote sensing

Digital Repository Service at National Institute of Oceanography (India)

ManiMurali, R.; Shrivastava, D.; Vethamony, P.

-raey et al. 8 used remote sensing for detecting beach erosion and ac- cretion along Damietta Port, Egypt. Narayana and Priju 9 studied the shoreline changes along the central Kerala coast using satellite images. Shoreline-change mapping was carried... and detecting long-term change in the entire coastline. Meijerink 11 and Rao 12 studied the dynamic geomor- phology of Mahanadi delta and problems of coastal dyna- mics and shoreline changes which arose after the construction of Paradip port. Rupali 13...

Application of remote sensing and GIS for detection of long-term mangrove shoreline changes in Ca Mau, Vietnam

Science.gov (United States)

Tran Thi, V.; Phan Nguyen, H.; Tien Thi Xuan, A.; Dahdouh-Guebas, F.; Koedam, N.

2013-12-01

Ca Mau at the southern tip of Vietnam supports a large area of mangroves and has a high value for biodiversity and scenic beauty. This area is affected by erosion along the East Sea and accretion along the Gulf of Thailand, leading to the loss of huge stretches of mangroves along the East Sea and, in some cases, loss of ecosystems services provided by mangroves. In this study, we used remotely sensed aerial (1953), Landsat (1979, 1988, and 2000) and SPOT (1992, 1995, 2004, 2008 and 2009, and 2011) images and the Digital Shoreline Analysis System (DSAS) to quantify the rate of mangrove shoreline change for a 58 yr period. There were 1129 transects sampled at 100 m intervals along the mangrove shoreline and two statistical methods, namely End Point Rate (EPR) and Linear Regression Rate (LRR), were used to calculate the rate of change of mangrove shorelines and distance from 1953 to 2011. The study confirms erosion and accretion respectively are significant at the Eastern and Western Sea sides of the Ca Mau tip. The East Sea side had a mean erosion LRR of 33.24 m yr-1. For the accretion trend at the Gulf of Thailand side averaged at rate of 40.65 m yr-1. The results are important in predicting changes of coastal ecosystem boundaries and enable advanced planning for specific sections of coastline, to minimize or neutralize losses, to inform provincial rehabilitation efforts and reduce threats to coastal development and human safety.

An empirical orthogonal function analysis of ocean shoreline location on the Virginia barrier islands

Science.gov (United States)

Haluska, J. D.

2017-12-01

Shoreline change along the Eastern Atlantic shore of Virginia has been studied for the individual barrier islands but not as an integrated system. This study combines the Atlantic shoreline locations for eleven barrier islands obtained from LANDSAT 5, 7, and 8 images. Approximately 250 shoreline locations over a 24-year period from Jan 1990 to Dec 2014 were extracted from the digitized shoreline data at 338 transects. The resulting 338 by 250 matrix was analyzed by the empirical orthogonal function (EOF) technique. The first four principal components (PC) explained 86 percent of the sample variance. Since the data was not detrended, the first PC was the overall trend of the data with a discontinuity in 2004-2005. The 2004-2005 interval included storm events and large shoreline changes. PCs 2 to 4 reflect the effects of El Nino events and tropical and non-tropical storms. Eigenvectors 1 to 4 all show the effects of the nine inlets in the island group. Eigenvector (EV) 1 explains 59 percent of the shoreline spatial variance and shows the largest changes at the northern and southern island ends. EVs 2 to 4 reflect the pattern of EV1 but at sequentially smaller percentages of the spatial variance. As a group, the eleven islands are losing ocean side shoreline. The lone exception is Hog Island. Sea level had the strongest correlation with the shoreline loss trend of PC1. The coefficient of determination was 0.41. The NAO and MEI also correlated with PC1 with correlations of determination of 0.05 and 0.12 respectively. These confidence level for the three factors was better than 99 percent. Sea level also correlated with PC3 and PC4. The PCs as a group show that the year intervals 2004-2005 and 2009-2010 had large effects on the shoreline change pattern for the island group. EVs 1 to 4 had the highest range of shoreline change at the island ends indicating the effect the changes of the inlets have on the adjacent islands. The smaller islands as a group had a higher level

Hotspot advance speed - hotspot size/core-hotspot distance relation ...

African Journals Online (AJOL)

We examined the evolution of extragalactic radio sources using the observed corehotspot distance and hotspot size. Analysis indicates a fairly strong positive correlation in the ratio of core-hotspot distance to hotspot size between that of the approaching arm and the receding arm with a correlation coefficient of r ~ 0.7.

Overview of shoreline cleaning agents

International Nuclear Information System (INIS)

Clayton, J.

1992-01-01

Chemical cleaning agents may be used to promote release of stranded oil from shorelines for reasons including biological sensitivity of indigenous fauna and flora to the oil, amenity considerations of the shoreline, or concern about refloating of the oil and subsequent stranding on adjacent shorelines. While use of chemical cleaning agents may be appropriate under proper toxic responses in circumstances, certain limitations should be recognized. The potential for toxic responses in indigenous fauna and flora to the cleaning agents must be considered. Enhanced penetration of oil into permeable shorelines following treatment with chemical cleaning agents also is not desirable. However, if conditions related to toxicity and substrate permeability are determined to be acceptable, the use of chemical cleaning agents for treatment of stranded oil can be considered. Chemical agents for cleaning oiled shorelines can be grouped into three categories: (1) non-surfactant-based solvents, (2) chemical dispersants, and (3) formulations especially designed to release stranded oil from shoreline substrates (i.e., shoreline-cleaning-agents). Depending on the specific circumstances present on an oiled shoreline, it is generally desirable that chemical agents used for cleaning will release oil from shoreline substrate(s) to surface waters. Recovery of the oil can then be accomplished by mechanical procedures such as booming and skimming operations

Application of remote sensing and GIS for detection of long-term mangrove shoreline changes in Mui Ca Mau, Vietnam

Science.gov (United States)

Tran Thi, V.; Tien Thi Xuan, A.; Phan Nguyen, H.; Dahdouh-Guebas, F.; Koedam, N.

2014-07-01

Mui Ca Mau at the southern tip of Vietnam supports a large area of mangroves and has a high value for biodiversity and scenic beauty. This area is affected by erosion along the East Sea and accretion along the Gulf of Thailand, leading to the loss of huge stretches of mangroves along the East Sea and, in some cases, loss of environmental and ecosystem services provided by mangroves. In this study, we used remotely sensed aerial (1953), Landsat (1979, 1988 and 2000) and SPOT (1992, 1995, 2004, 2008, 2009 and 2011) images and the Digital Shoreline Analysis System (DSAS) to quantify the rate of mangrove shoreline change for a 58 yr period. There were 1129 transects sampled at 100 m intervals along the mangrove shoreline and two statistical methods, namely end point rate (EPR) and linear regression rate (LRR), were used to calculate the rate of change of mangrove shorelines and distance from 1953 to 2011. The study confirms that erosion and accretion, respectively, are significant at the East Sea and Gulf of Thailand sides of Mui Ca Mau. The East Sea side had a mean erosion LRR of 33.24 m yr-1. The accretion trend at the Gulf of Thailand side had an average rate of 40.65 m yr-1. The results are important in predicting changes of coastal ecosystem boundaries and enable advanced planning for specific sections of coastline, to minimize or neutralize losses, to inform provincial rehabilitation efforts and reduce threats to coastal development and human safety.

Living shorelines enhanced the resilience of saltmarshes to Hurricane Matthew (2016).

Science.gov (United States)

Smith, Carter S; Puckett, Brandon; Gittman, Rachel K; Peterson, Charles H

2018-06-01

Nature-based solutions, such as living shorelines, have the potential to restore critical ecosystems, enhance coastal sustainability, and increase resilience to natural disasters; however, their efficacy during storm events compared to traditional hardened shorelines is largely untested. This is a major impediment to their implementation and promotion to policy-makers and homeowners. To address this knowledge gap, we evaluated rock sill living shorelines as compared to natural marshes and hardened shorelines (i.e., bulkheads) in North Carolina, USA for changes in surface elevation, Spartina alterniflora stem density, and structural damage from 2015 to 2017, including before and after Hurricane Matthew (2016). Our results show that living shorelines exhibited better resistance to landward erosion during Hurricane Matthew than bulkheads and natural marshes. Additionally, living shorelines were more resilient than hardened shorelines, as they maintained landward elevation over the two-year study period without requiring any repair. Finally, rock sill living shorelines were able to enhance S. alterniflora stem densities over time when compared to natural marshes. Our results suggest that living shorelines have the potential to improve coastal resilience while supporting important coastal ecosystems. © 2018 by the Ecological Society of America.

NOAA Composite Shoreline - Vectorized Shoreline Derived From NOAA-NOS Coastal Survey Maps and Aerial Photographs

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The NOAA Composite Shoreline is primarily intended for high-resolution cartographic representation of the shoreline. It is a high-resolution vector shoreline based...

Digital shoreline analysis system-based change detection along the highly eroding Krishna-Godavari delta front

Science.gov (United States)

Kallepalli, Akhil; Kakani, Nageswara Rao; James, David B.; Richardson, Mark A.

2017-07-01

Coastal regions are highly vulnerable to rising sea levels due to global warming. Previous Intergovernmental Panel on Climate Change (2013) predictions of 26 to 82 cm global sea level rise are now considered conservative. Subsequent investigations predict much higher levels which would displace 10% of the world's population living less than 10 m above sea level. Remote sensing and GIS technologies form the mainstay of models on coastal retreat and inundation to future sea-level rise. This study estimates the varying trends along the Krishna-Godavari (K-G) delta region. The rate of shoreline shift along the 330-km long K-G delta coast was estimated using satellite images between 1977 and 2008. With reference to a selected baseline from along an inland position, end point rate and net shoreline movement were calculated using a GIS-based digital shoreline analysis system. The results indicated a net loss of about 42.1 km2 area during this 31-year period, which is in agreement with previous literature. Considering the nature of landforms and EPR, the future hazard line (or coastline) is predicted for the area; the predication indicates a net erosion of about 57.6 km2 along the K-G delta coast by 2050 AD.

Numerical Modeling of Shoreline Undulations

DEFF Research Database (Denmark)

Kærgaard, Kasper Hauberg

model has been developed which describes the longshore sediment transport along arbitrarily shaped shorelines. The numerical model is based on a spectral wave model, a depth integrated flow model, a wave-phase resolving sediment transport description and a one-line shoreline model. First the theoretical...... of the feature and under predicts the migration speeds of the features. On the second shoreline, the shoreline model predicts undulations lengths which are longer than the observed undulations. Lastly the thesis considers field measurements of undulations of the bottom bathymetry along an otherwise straight...... length of the shoreline undulations is determined in the linear regime using a shoreline stability analysis based on the numerical model. The analysis shows that the length of the undulations in the linear regime depends on the incoming wave conditions and on the coastal profile. For larger waves...

Hurricane impact and recovery shoreline change analysis of the Chandeleur Islands, Louisiana, USA: 1855 to 2005

Science.gov (United States)

Fearnley, Sarah M.; Miner, Michael; Brock, John C.

2011-01-01

Results from historical (1855-2005) shoreline change analysis of the Chandeleur Islands, Louisiana, demonstrate that tropical cyclone frequency dominates the long-term evolution of this barrier-island arc. The detailed results of this study were published in December 2009 as part of a special issue of Geo-Marine Letters that documents early results from the Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazard Susceptibility Project.

Forecasted coral reef decline in marine biodiversity hotspots under climate change.

Science.gov (United States)

Descombes, Patrice; Wisz, Mary S; Leprieur, Fabien; Parravicini, Valerianio; Heine, Christian; Olsen, Steffen M; Swingedouw, Didier; Kulbicki, Michel; Mouillot, David; Pellissier, Loïc

2015-01-21

Coral bleaching events threaten coral reef habitats globally and cause severe declines of local biodiversity and productivity. Related to high sea surface temperatures (SST), bleaching events are expected to increase as a consequence of future global warming. However, response to climate change is still uncertain as future low-latitude climatic conditions have no present-day analogue. Sea surface temperatures during the Eocene epoch were warmer than forecasted changes for the coming century, and distributions of corals during the Eocene may help to inform models forecasting the future of coral reefs. We coupled contemporary and Eocene coral occurrences with information on their respective climatic conditions to model the thermal niche of coral reefs and its potential response to projected climate change. We found that under the RCP8.5 climate change scenario, the global suitability for coral reefs may increase up to 16% by 2100, mostly due to improved suitability of higher latitudes. In contrast, in its current range, coral reef suitability may decrease up to 46% by 2100. Reduction in thermal suitability will be most severe in biodiversity hotspots, especially in the Indo-Australian Archipelago. Our results suggest that many contemporary hotspots for coral reefs, including those that have been refugia in the past, spatially mismatch with future suitable areas for coral reefs posing challenges to conservation actions under climate change. © 2015 John Wiley & Sons Ltd.

Comparison of Two Simplification Methods for Shoreline Extraction from Digital Orthophoto Images

Science.gov (United States)

Bayram, B.; Sen, A.; Selbesoglu, M. O.; Vārna, I.; Petersons, P.; Aykut, N. O.; Seker, D. Z.

2017-11-01

The coastal ecosystems are very sensitive to external influences. Coastal resources such as sand dunes, coral reefs and mangroves has vital importance to prevent coastal erosion. Human based effects also threats the coastal areas. Therefore, the change of coastal areas should be monitored. Up-to-date, accurate shoreline information is indispensable for coastal managers and decision makers. Remote sensing and image processing techniques give a big opportunity to obtain reliable shoreline information. In the presented study, NIR bands of seven 1:5000 scaled digital orthophoto images of Riga Bay-Latvia have been used. The Object-oriented Simple Linear Clustering method has been utilized to extract shoreline of Riga Bay. Bend and Douglas-Peucker methods have been used to simplify the extracted shoreline to test the effect of both methods. Photogrammetrically digitized shoreline has been taken as reference data to compare obtained results. The accuracy assessment has been realised by Digital Shoreline Analysis tool. As a result, the achieved shoreline by the Bend method has been found closer to the extracted shoreline with Simple Linear Clustering method.

COMPARISON OF TWO SIMPLIFICATION METHODS FOR SHORELINE EXTRACTION FROM DIGITAL ORTHOPHOTO IMAGES

Directory of Open Access Journals (Sweden)

B. Bayram

2017-11-01

Full Text Available The coastal ecosystems are very sensitive to external influences. Coastal resources such as sand dunes, coral reefs and mangroves has vital importance to prevent coastal erosion. Human based effects also threats the coastal areas. Therefore, the change of coastal areas should be monitored. Up-to-date, accurate shoreline information is indispensable for coastal managers and decision makers. Remote sensing and image processing techniques give a big opportunity to obtain reliable shoreline information. In the presented study, NIR bands of seven 1:5000 scaled digital orthophoto images of Riga Bay-Latvia have been used. The Object-oriented Simple Linear Clustering method has been utilized to extract shoreline of Riga Bay. Bend and Douglas-Peucker methods have been used to simplify the extracted shoreline to test the effect of both methods. Photogrammetrically digitized shoreline has been taken as reference data to compare obtained results. The accuracy assessment has been realised by Digital Shoreline Analysis tool. As a result, the achieved shoreline by the Bend method has been found closer to the extracted shoreline with Simple Linear Clustering method.

Shoreline change detection from Karwar to Gokarna - South West coast of India using remotely Sensed data

Digital Repository Service at National Institute of Oceanography (India)

Choudhary, R.; Gowthaman, R.; SanilKumar, V.

-494 #02060313 Copyright ©2013 CAFET-INNOVA TECHNICAL SOCIETY. All rights reserved. Shoreline change detection from Karwar to Gokarna - South West coast of India using remotely Sensed data RICHA CHOUDHARY 1 , R. GOWTHAMAN 2 AND V. SANIL KUMAR 2 1... years period. Gangavali river mouth has narrowed due to siltation. Significant changes in the geomorphic features like spit growth, braided island, creeks, tidal flat are observed near Kali and Gangavali river mouth. Keywords: Remote sensing...

Semi-automated procedures for shoreline extraction using single RADARSAT-1 SAR image

Science.gov (United States)

Al Fugura, A.'kif; Billa, Lawal; Pradhan, Biswajeet

2011-12-01

Coastline identification is important for surveying and mapping reasons. Coastline serves as the basic point of reference and is used on nautical charts for navigation purposes. Its delineation has become crucial and more important in the wake of the many recent earthquakes and tsunamis resulting in complete change and redraw of some shorelines. In a tropical country like Malaysia, presence of cloud cover hinders the application of optical remote sensing data. In this study a semi-automated technique and procedures are presented for shoreline delineation from RADARSAT-1 image. A scene of RADARSAT-1 satellite image was processed using enhanced filtering technique to identify and extract the shoreline coast of Kuala Terengganu, Malaysia. RADSARSAT image has many advantages over the optical data because of its ability to penetrate cloud cover and its night sensing capabilities. At first, speckles were removed from the image by using Lee sigma filter which was used to reduce random noise and to enhance the image and discriminate the boundary between land and water. The results showed an accurate and improved extraction and delineation of the entire coastline of Kuala Terrenganu. The study demonstrated the reliability of the image averaging filter in reducing random noise over the sea surface especially near the shoreline. It enhanced land-water boundary differentiation, enabling better delineation of the shoreline. Overall, the developed techniques showed the potential of radar imagery for accurate shoreline mapping and will be useful for monitoring shoreline changes during high and low tides as well as shoreline erosion in a tropical country like Malaysia.

Engaging Local Communities in Arctic Observing Networks: A Collaborative Shoreline Change Risk WebGIS for Alaska's Arctic Slope Region

Science.gov (United States)

Brady, M.

2017-12-01

This study engaged local community stakeholders in Alaska's Arctic Slope Region to develop a web-based shoreline change risk geographic information system (WebGIS) in collaboration with the North Slope Borough and its residents. The value of the effort includes rich spatial documentation of local risks across the vast, remote, and rapidly changing shoreline, and identification of local manager information needs to direct WebGIS development. The study advances our understanding of shoreline change problems from the perspective of local Arctic communities beyond municipal impacts while building decision support. Over fifty local residents in three communities with collective coastal knowledge that extends across the National Petroleum Reserve - Alaska and Arctic National Wildlife Refuge shared their perspectives on hard copy maps. Sixteen managers provided usability perceptions of a beta WebGIS with shoreline change susceptibility information summarized at relevant asset locations such as subsistence camps. The hard copy maps with 300 "problem places" were digitized for analysis, which revealed problems across the coastline, especially challenges to boating for subsistence hunting such as shoaling cutting off access and creating hazards. The usability workshop revealed specific information needs including the need to monitor impacts at decommissioned national defense radar sites repurposed by locals to centralize oil and gas activity. These results were analyzed using an Instructional Systems Design (ISD) framework consisting of front-end and formative WebGIS evaluation phases. The front-end evaluation is the local input on hard copy maps, which provided local verification of coastal risks. The formative evaluation is the usability workshop with managers, which informed WebGIS development while promoting user buy-in. In terms of product and process, the local knowledge and information needs collected are significant because they establish local engagement with the

Shoreline changes during the last 2000 years on the Saurashtra coast of India: Study based on archaeological evidences

Digital Repository Service at National Institute of Oceanography (India)

Gaur, A.S.; Vora, K.H.; Sundaresh

. In this communication an attempt is made to study shoreline and sea-level changes during the last 2000 years on the basis of archaeological evidence. Archaeological excavations undertaken at Bet Dwarka (western most part of India) revealed an interesting cultural...

Lack of visible change around active hotspots on Io

Science.gov (United States)

1996-01-01

Detail of changes around two hotspots on Jupiter's moon Io as seen by Voyager 1 in April 1979 (left) and NASA's Galileo spacecraft on September 7th, 1996 (middle and right). The right frame was created with images from the Galileo Solid State Imaging system's near-infrared (756 nm), green, and violet filters. For better comparison, the middle frame mimics Voyager colors. The calderas at the top and at the lower right of the images correspond to the locations of hotspots detected by the Near Infrared Mapping Spectrometer aboard the Galileo spacecraft during its second orbit. There are no significant morphologic changes around these hot calderas; however, the diffuse red deposits, which are simply dark in the Voyager colors, appear to be associated with recent and/or ongoing volcanic activity. The three calderas range in size from approximately 100 kilometers to approximately 150 kilometers in diameter. The caldera in the lower right of each frame is named Malik. North is to the top of all frames.The Jet Propulsion Laboratory, Pasadena, CA manages the Galileo mission for NASA's Office of Space Science, Washington, DC. JPL is an operating division of California Institute of Technology (Caltech).This image and other images and data received from Galileo are posted on the World Wide Web, on the Galileo mission home page at URL http://galileo.jpl.nasa.gov. Background information and educational context for the images can be found at URL http://www.jpl.nasa.gov/galileo/sepo

Hopping hotspots: global shifts in marine biodiversity.

Science.gov (United States)

Renema, W; Bellwood, D R; Braga, J C; Bromfield, K; Hall, R; Johnson, K G; Lunt, P; Meyer, C P; McMonagle, L B; Morley, R J; O'Dea, A; Todd, J A; Wesselingh, F P; Wilson, M E J; Pandolfi, J M

2008-08-01

Hotspots of high species diversity are a prominent feature of modern global biodiversity patterns. Fossil and molecular evidence is starting to reveal the history of these hotspots. There have been at least three marine biodiversity hotspots during the past 50 million years. They have moved across almost half the globe, with their timing and locations coinciding with major tectonic events. The birth and death of successive hotspots highlights the link between environmental change and biodiversity patterns. The antiquity of the taxa in the modern Indo-Australian Archipelago hotspot emphasizes the role of pre-Pleistocene events in shaping modern diversity patterns.

Combining pre-spill shoreline segmentation data and shoreline assessment tools to support early response management and planning

International Nuclear Information System (INIS)

Lamarche, A.; Owens, E.H.; Martin, V.; Laforest, S.

2003-01-01

Several organizations, such as Environment Canada and the Alyeska Pipeline Service Company, are developing or refining pre-spill databases containing information about physical shoreline characteristics. Automated links between these pre-spill shoreline characteristic databases and computerized shoreline assessment tools were recently created by Environment Canada (Quebec and Ontario regions). The tools, which use Geographical Information System (GIS) technology, can be used for planning and documenting support needed for shoreline cleanup operations. A training exercise, designed to evaluate a spill management system integrating the Quebec region pre-spill shoreline database and the ShoreAssess R shoreline assessment system, was conducted at Vercheres, Quebec in October 2002 by Eastern Canada Response Corporation. The testing took place during the planning stage of the early phases of a spill, namely after the first over-flight. The computerized shoreline assessment tools made it possible to evaluate the length and type of shoreline that would potentially be impacted by oil. The tools also made it possible to assess the shoreline treatment methods most likely to be used, and evaluate the probable duration of the cleanup operation. The information would have to be available in time to be considered during the planning activities. The training exercise demonstrated that the integration of the databases is a valuable tool during the early phases of an oil spill response. 9 refs., 2 tabs., 6 figs

Shoreline change and potential sea level rise impacts in a climate hazardous location in southeast coast of India.

Science.gov (United States)

Jayanthi, Marappan; Thirumurthy, Selvasekar; Samynathan, Muthusamy; Duraisamy, Muthusamy; Muralidhar, Moturi; Ashokkumar, Jangam; Vijayan, Koyadan Kizhakkedath

2017-12-28

Climate change impact on the environment makes the coastal areas vulnerable and demands the evaluation of such susceptibility. Historical changes in the shoreline positions and inundation based on projected sea-level scenarios of 0.5 and 1 m were assessed for Nagapattinam District, a low-lying coastal area in the southeast coast of India, using high-resolution Shuttle Radar Topography Mission data; multi-dated Landsat satellite images of 1978, 1991, 2003, and 2015; and census data of 2011. Image processing, geographical information system, and digital shoreline analysis system methods were used in the study. The shoreline variation indicated that erosion rate varied at different time scales. The end point rate indicated the highest mean erosion of - 3.12 m/year, occurred in 73% of coast between 1978 and 1991. Weighted linear regression analysis revealed that the coast length of 83% was under erosion at a mean rate of - 2.11 m/year from 1978 to 2015. Sea level rise (SLR) impact indicated that the coastal area of about 14,122 ha from 225 villages and 31,318 ha from 272 villages would be permanently inundated for the SLR of 0.5 and 1 m, respectively, which includes agriculture, mangroves, wetlands, aquaculture, and forest lands. The loss of coastal wetlands and its associated productivity will severely threaten more than half the coastal population. Adaptation measures in people participatory mode, integrated into coastal zone management with a focus on sub-regional coastal activities, are needed to respond to the consequences of climate change.

Numerical prediction of shoreline adjacent to breakwater

Digital Repository Service at National Institute of Oceanography (India)

Mahadevan, R.; Chandramohan, P.; Nayak, B.U.

Existing mathematical models for prediction of shoreline changes in the vicinity of a breakwater were reviewed The analytical and numerical results obtained from these models have been compared Under the numerical approach, two different implicit...

Human population in the biodiversity hotspots.

Science.gov (United States)

Cincotta, R P; Wisnewski, J; Engelman, R

2000-04-27

Biologists have identified 25 areas, called biodiversity hotspots, that are especially rich in endemic species and particularly threatened by human activities. The human population dynamics of these areas, however, are not well quantified. Here we report estimates of key demographic variables for each hotspot, and for three extensive tropical forest areas that are less immediately threatened. We estimate that in 1995 more than 1.1 billion people, nearly 20% of world population, were living within the hotspots, an area covering about 12% of Earth's terrestrial surface. We estimate that the population growth rate in the hotspots (1995-2000) is 1.8% yr(-1), substantially higher than the population growth rate of the world as a whole (1.3% yr(-1)) and above that of the developing countries (1.6% yr(-1)). These results suggest that substantial human-induced environmental changes are likely to continue in the hotspots and that demographic change remains an important factor in global biodiversity conservation. The results also underline the potential conservation significance of the continuing worldwide declines in human fertility and of policies and programs that influence human migration.

Uncertainties in sandy shorelines evolution under the Bruun rule assumption

Directory of Open Access Journals (Sweden)

Gonéri eLe Cozannet

2016-04-01

Full Text Available In the current practice of sandy shoreline change assessments, the local sedimentary budget is evaluated using the sediment balance equation, that is, by summing the contributions of longshore and cross-shore processes. The contribution of future sea-level-rise induced by climate change is usually obtained using the Bruun rule, which assumes that the shoreline retreat is equal to the change of sea-level divided by the slope of the upper shoreface. However, it remains unsure that this approach is appropriate to account for the impacts of future sea-level rise. This is due to the lack of relevant observations to validate the Bruun rule under the expected sea-level rise rates. To address this issue, this article estimates the coastal settings and period of time under which the use of the Bruun rule could be (invalidated, in the case of wave-exposed gently-sloping sandy beaches. Using the sedimentary budgets of Stive (2004 and probabilistic sea-level rise scenarios based on IPCC, we provide shoreline change projections that account for all uncertain hydrosedimentary processes affecting idealized coasts (impacts of sea-level rise, storms and other cross-shore and longshore processes. We evaluate the relative importance of each source of uncertainties in the sediment balance equation using a global sensitivity analysis. For scenario RCP 6.0 and 8.5 and in the absence of coastal defences, the model predicts a perceivable shift toward generalized beach erosion by the middle of the 21st century. In contrast, the model predictions are unlikely to differ from the current situation in case of scenario RCP 2.6. Finally, the contribution of sea-level rise and climate change scenarios to sandy shoreline change projections uncertainties increases with time during the 21st century. Our results have three primary implications for coastal settings similar to those provided described in Stive (2004 : first, the validation of the Bruun rule will not necessarily be

Analysis of Decadal-Scale Shoreline Change along the Hamlet of Paulatuk (Canadian Arctic), using Landsat Satellite Imagery and GIS techniques from 1984 to 2014.

Science.gov (United States)

Sankar, R. D.; Murray, M. S.; Wells, P.

2016-12-01

Increased accuracy in estimating coastal change along localized segments of the Canadian Arctic coast is essential, in order to identify plausible adaptation initiatives to deal with the effects of climate change. This paper quantifies rates of shoreline movement along an 11 km segment of the Hamlet of Paulatuk (Northwest Territories, Canada), using an innovative modelling technique - Analyzing Moving Boundaries Using R (AMBUR). Approximately two dozen shorelines, obtained from high-resolution Landsat satellite imagery were analyzed. Shorelines were extracted using the band ratio method and compiled in ArcMapTM to determine decadal trends of coastal change. The unique geometry of Paulatuk facilitated an independent analysis of the western and eastern sections of the study area. Long-term (1984-2014) and short-term (1984-2003) erosion and accretion rates were calculated using the Linear Regression and End Point Rate methods respectively. Results reveal an elevated rate of erosion for the western section of the hamlet over the long-term (-1.1 m/yr), compared to the eastern portion (-0.92 m/yr). The study indicates a significant alongshore increase in the rates of erosion on both portions of the study area, over the short-term period 1984 to 2003. Mean annual erosion rates increased over the short-term along the western segment (-1.4 m/yr), while the eastern shoreline retreated at a rate of -1.3 m/yr over the same period. The analysis indicates that an amalgamation of factors may be responsible for the patterns of land loss experienced along Paulatuk. These include increased sea-surface temperature coupled with dwindling arctic ice and elevated storm hydrodynamics. The analysis further reveals that the coastline along the eastern portion of the hamlet, where the majority of the population reside, is vulnerable to a high rate of shoreline erosion.

Instantaneous Shoreline Extraction Utilizing Integrated Spectrum and Shadow Analysis From LiDAR Data and High-resolution Satellite Imagery

Science.gov (United States)

Lee, I.-Chieh

Shoreline delineation and shoreline change detection are expensive processes in data source acquisition and manual shoreline delineation. These costs confine the frequency and interval of shoreline mapping periods. In this dissertation, a new shoreline delineation approach was developed targeting on lowering the data source cost and reducing human labor. To lower the cost of data sources, we used the public domain LiDAR data sets and satellite images to delineate shorelines without the requirement of data sets being acquired simultaneously, which is a new concept in this field. To reduce the labor cost, we made improvements in classifying LiDAR points and satellite images. Analyzing shadow relations with topography to improve the satellite image classification performance is also a brand-new concept. The extracted shoreline of the proposed approach could achieve an accuracy of 1.495 m RMSE, or 4.452m at the 95% confidence level. Consequently, the proposed approach could successfully lower the cost and shorten the processing time, in other words, to increase the shoreline mapping frequency with a reasonable accuracy. However, the extracted shoreline may not compete with the shoreline extracted by aerial photogrammetric procedures in the aspect of accuracy. Hence, this is a trade-off between cost and accuracy. This approach consists of three phases, first, a shoreline extraction procedure based mainly on LiDAR point cloud data with multispectral information from satellite images. Second, an object oriented shoreline extraction procedure to delineate shoreline solely from satellite images; in this case WorldView-2 images were used. Third, a shoreline integration procedure combining these two shorelines based on actual shoreline changes and physical terrain properties. The actual data source cost would only be from the acquisition of satellite images. On the other hand, only two processes needed human attention. First, the shoreline within harbor areas needed to be

Oyster reefs as natural breakwaters mitigate shoreline loss and facilitate fisheries.

Directory of Open Access Journals (Sweden)

Steven B Scyphers

Full Text Available Shorelines at the interface of marine, estuarine and terrestrial biomes are among the most degraded and threatened habitats in the coastal zone because of their sensitivity to sea level rise, storms and increased human utilization. Previous efforts to protect shorelines have largely involved constructing bulkheads and seawalls which can detrimentally affect nearshore habitats. Recently, efforts have shifted towards "living shoreline" approaches that include biogenic breakwater reefs. Our study experimentally tested the efficacy of breakwater reefs constructed of oyster shell for protecting eroding coastal shorelines and their effect on nearshore fish and shellfish communities. Along two different stretches of eroding shoreline, we created replicated pairs of subtidal breakwater reefs and established unaltered reference areas as controls. At both sites we measured shoreline and bathymetric change and quantified oyster recruitment, fish and mobile macro-invertebrate abundances. Breakwater reef treatments mitigated shoreline retreat by more than 40% at one site, but overall vegetation retreat and erosion rates were high across all treatments and at both sites. Oyster settlement and subsequent survival were observed at both sites, with mean adult densities reaching more than eighty oysters m(-2 at one site. We found the corridor between intertidal marsh and oyster reef breakwaters supported higher abundances and different communities of fishes than control plots without oyster reef habitat. Among the fishes and mobile invertebrates that appeared to be strongly enhanced were several economically-important species. Blue crabs (Callinectes sapidus were the most clearly enhanced (+297% by the presence of breakwater reefs, while red drum (Sciaenops ocellatus (+108%, spotted seatrout (Cynoscion nebulosus (+88% and flounder (Paralichthys sp. (+79% also benefited. Although the vertical relief of the breakwater reefs was reduced over the course of our study

Variability and correlations of shoreline and dunes on the southern Baltic coast (CRS Lubiatowo, Poland)

OpenAIRE

Zbigniew Pruszak; Rafal Ostrowski; Jan Schönhofer

2011-01-01

The paper analyses the results of field investigations into the evolution of the shoreline and dune toe positions in a multi-bar,dissipative coastal zone. The correlations between the changes in the shoreline and the dune toe range from -0.4 to 0.8. It is most often the case that the dune toe is stable while the shoreline moves. Consistent cross-shore migration is slightly more likelyto happen than the divergent or convergent movements of both lines. Shoreline retreat and advance attain resp...

Historical sediment budget and present-day catchment-shoreline coupling at Twofold Bay, southeastern Australia

Science.gov (United States)

Tamura, T.; Oliver, T.; Hudson, J.; Woodroffe, C. D.

2017-12-01

Considering projected impacts of sea-level rise in the 21st century on sandy shorelines, an understanding of long-term sediment budget for individual beaches or coastal compartments supports assessments of shoreline stability. We examined a low-lying coastal beach-ridge barrier in Twofold Bay using optically stimulated luminescence (OSL) dating , airborne LiDAR, sedimentological analysis and seismic data to assess changes in rates of sediment supply to this shoreline through time. Calculations of barrier volume, Twofold Bay bay-floor sediment volume and estimates of sediment delivery from a proximal river system provide a broad-scale assessment of past-sediment budget. Between ca. 7500 years ago and 1500 years ago, sources of sediment for shoreline progradation at Boydtown were bay-floor sediments either inherited or moved into the embayment during late-stage transgression. Progradation rate between ca. 7500-1500 years ago was 0.16 m/yr with subaerial barrier volume accumulating at 0.46 m3/m/yr. Between ca. 1500 years and present day, the Towamba River to the south has delivered additional sediment to the Boydtown shoreline more than doubling shoreline progradation rate to 0.65 m/yr and subaerial barrier accumulation has risen to 1.83 m3/m/yr. The delivery of fluvial sediment from the Towamba River was restricted to the past ca. 1500 years as prior to this, estuary infilling prevented floods delivering sediments to the bay. This recent historical coupling of river sand supply and shoreline progradation rate implies that anthropogenic modifications to the Towamba River catchment such as river damming, or climatic changes reducing rainfall or runoff, would negatively impact the Boydtown Beach shoreline. Conversely increased rainfall or deforestation may increase sediment discharge due to upstream erosion. The Boydtown shoreline within Twofold Bay may be able to maintain its current position in the coming century if fluvial sediment delivery continues. The fact that

Integrated Shoreline Extraction Approach with Use of Rasat MS and SENTINEL-1A SAR Images

Science.gov (United States)

Demir, N.; Oy, S.; Erdem, F.; Şeker, D. Z.; Bayram, B.

2017-09-01

Shorelines are complex ecosystems and highly important socio-economic environments. They may change rapidly due to both natural and human-induced effects. Determination of movements along the shoreline and monitoring of the changes are essential for coastline management, modeling of sediment transportation and decision support systems. Remote sensing provides an opportunity to obtain rapid, up-to-date and reliable information for monitoring of shoreline. In this study, approximately 120 km of Antalya-Kemer shoreline which is under the threat of erosion, deposition, increasing of inhabitants and urbanization and touristic hotels, has been selected as the study area. In the study, RASAT pansharpened and SENTINEL-1A SAR images have been used to implement proposed shoreline extraction methods. The main motivation of this study is to combine the land/water body segmentation results of both RASAT MS and SENTINEL-1A SAR images to improve the quality of the results. The initial land/water body segmentation has been obtained using RASAT image by means of Random Forest classification method. This result has been used as training data set to define fuzzy parameters for shoreline extraction from SENTINEL-1A SAR image. Obtained results have been compared with the manually digitized shoreline. The accuracy assessment has been performed by calculating perpendicular distances between reference data and extracted shoreline by proposed method. As a result, the mean difference has been calculated around 1 pixel.

The spatial regulation of meiotic recombination hotspots: are all DSB hotspots crossover hotspots?

Science.gov (United States)

Serrentino, Maria-Elisabetta; Borde, Valérie

2012-07-15

A key step for the success of meiosis is programmed homologous recombination, during which crossovers, or exchange of chromosome arms, take place. Crossovers increase genetic diversity but their main function is to ensure accurate chromosome segregation. Defects in crossover number and position produce aneuploidies that represent the main cause of miscarriages and chromosomal abnormalities such as Down's syndrome. Recombination is initiated by the formation of programmed double strand breaks (DSBs), which occur preferentially at places called DSB hotspots. Among all DSBs generated, only a small fraction is repaired by crossover, the other being repaired by other homologous recombination pathways. Crossover maps have been generated in a number of organisms, defining crossover hotspots. With the availability of genome-wide maps of DSBs as well as the ability to measure genetically the repair outcome at several hotspots, it is becoming more and more clear that not all DSB hotspots behave the same for crossover formation, suggesting that chromosomal features distinguish different types of hotspots. Copyright © 2012. Published by Elsevier Inc.

Climate-induced hotspots in surface energy fluxes from 1948 to 2000

International Nuclear Information System (INIS)

Sheng Li; Liu Shuhua; Liu Heping

2010-01-01

Understanding how land surfaces respond to climate change requires knowledge of land-surface processes, which control the degree to which interannual variability and mean trends in climatic variables affect the surface energy budget. We use the latest version of the Community Land Model version 3.5 (CLM3.5), which is driven by the latest updated hybrid reanalysis-observation atmospheric forcing dataset constructed by Princeton University, to obtain global distributions of the surface energy budget from 1948 to 2000. We identify climate change hotspots and surface energy flux hotspots from 1948 to 2000. Surface energy flux hotspots, which reflect regions with strong changes in surface energy fluxes, reveal seasonal variations with strong signals in winter, spring, and autumn and weak ones in summer. Locations for surface energy flux hotspots are not, however, fully linked with those for climate change hotspots, suggesting that only in some regions are land surfaces more responsive to climate change in terms of interannual variability and mean trends.

Spatial and temporal patterns of shoreline change of a 280-km high-energy disrupted sandy coast from 1950 to 2014: SW France

Science.gov (United States)

Castelle, Bruno; Guillot, Benoit; Marieu, Vincent; Chaumillon, Eric; Hanquiez, Vincent; Bujan, Stéphane; Poppeschi, Coline

2018-01-01

A dataset of 15 geo-referenced orthomosaics photos was generated to address long-term shoreline change along approximately 270 km of high-energy sandy coast in SW France between 1950 and 2014. The coast consists of sandy beaches backed by coastal dunes, which are only disrupted by two wide tidal inlets (Arcachon and Maumusson), a wide estuary mouth (Gironde) and a few small wave-dominated inlets and coastal towns. A time and spatially averaged erosion trend of 1.12 m/year is found over 1950-2014, with a local maximum of approximately 11 m/year and a maximum local accretion of approximately 6 m/year, respectively. Maximum shoreline evolutions are observed along coasts adjacent to the inlets and to the estuary mouth, with erosion and accretion alternating over time on the timescale of decades. The two inlet-sandspit systems of Arcachon and Maumusson show a quasi-synchronous behaviour with the two updrift coasts accreting until the 1970s and subsequently eroding since then, which suggests that shoreline change at these locations is controlled by allocyclic mechanisms. Despite sea level rise and the well-established increase in winter wave height over the last decades, there is no capture of significant increase in mean erosion rate. This is hypothesized to be partly the result of relevant coastal dune management works from the 1960s to the 1980s after a long period of coastal dune disrepair during and after the Second World War. This study suggests that long-term shoreline change of high-energy sandy coasts disrupted by inlets and/or estuaries is complex and needs to consider a wide range of parameters including, non-extensively, waves, tides, inlet dynamics, sea level rise, coastal dune management and coastal defences, which challenges the development of reliable long-term coastal evolution numerical models.

UAV survey of a Thyrrenian micro-tidal beach for shoreline evolution update

Science.gov (United States)

Benassai, Guido; Pugliano, Giovanni; Di Paola, Gianluigi; Mucerino, Luigi

2015-04-01

shoreline change analysis was performed using the ArcGis 9.3 extension Digital Shoreline Analysis System (DSAS), v. 3.2 (Thieler et al., 2005). Transects orthogonal to the shoreline were generated at 100m intervals along the 1,4 km stretch of beach studied. The DSAS allowed the calculation of the rates of erosion/accretion between points, on the basis of the distance between them and the elapsed time, assuming changes to be linear processes. The rate of change of shoreline positions was evaluated at 14 points. The availability of shoreline data of the years 1954, 2000, 2006, 2008 and 2013 allowed to obtain the shoreline evolution trend in the last 60 years. Moreover, the UAV survey allowed to update the shoreline evolution and to obtain the volume of sediment lost by erosion, in order to suggest the locations and the amount of possible replenishments.

Impacts of shoreline erosion on coastal ecosystems in Songkhla Province

Directory of Open Access Journals (Sweden)

Nipaporn Chusrinuan

2009-07-01

Full Text Available Songkhla Province is located on the eastern coast of the southern Thai Peninsula, bordering the Gulf of Thailand for approximately 107 km. Most of the basin’s foreshores have been extensively developed for housing, tourism and shrimp farming. The beaches are under deteriorating impacts, often causing sediment transport which leads to an unnaturally high erosion rate. This natural phenomenon is considered to be a critical problem in the coastal areas affected by the hazard of coastal infrastructure and reduced beach esthetics for recreation. In this study, shoreline changes were compared between 1975 and 2006 using aerial photographs and Landsat imageries using Geographic Information System (GIS. The results revealed that 18.5 km2 of the coastal areas were altered during the period. Of this, 17.3 km2 suffered erosion and 1.2 km2were subjected to accretion. The most significant changes occurred between 1975-2006. Shoreline erosion was found at Ban Paktrae, Ranot District, with an average erosion rate of 5.3 m/year, while accretion occurred at Laem Samila, MuangSongkhla District with an average accretion rate of 2.04 m/year. The occurrences of shoreline erosion have contributed to the degradation of coastal soil and water quality, destruction of beach and mangrove forests, loss of human settlements and livelihood.These processes have led to deterioration of the quality of life of the residents. Prevention and mitigation measures to lessen economic and social impacts due to shoreline erosion are discussed.

Utilizing topobathy LIDAR datasets to identify shoreline variations and to direct charting updates in the northern Gulf of Mexico

Science.gov (United States)

Gremillion, S. L.; Wright, S. L.

2017-12-01

Topographic and bathymetric light detection and ranging (LIDAR), remote sensing tools used to measure vertical elevations, are commonly employed to monitor shoreline fluctuations. Many of these publicly available datasets provide wide-swath, nearshore topobathy which can be used to extract shoreline positions and analyze coastlines experiencing the greatest temporal and spatial variability. This study focused on the shorelines of Mississippi's Jackson County to determine the minimum time for significant positional changes to occur, relative to currently published NOAA navigational charts. Many of these dynamic shorelines are vulnerable to relative sea level rise, storm surge, and coastal erosion. Utilizing LIDAR datasets from 1998-2015, shoreline positions were derived and analyzed against NOAA's Continually Updated Shoreline Product (CUSP) to recommend the frequency at which future surveys should be conducted. Advisement of charting updates were based upon the resolution of published charts, and the magnitude of observed variances. Jackson County shorelines were divided into four areas for analysis; the mainland, Horn Island, Petit Bois Island (PBI), and a dredge spoil area west of PBI. The mainland shoreline experienced an average change rate of +0.57 m/yr during the study period. This stability was due to engineering structures implemented in the early 1920's to protect against tropical storms. Horn Island, the most stable barrier island, changed an average of -1.34 m/yr, while PBI had an average change of -2.70 m/yr throughout. Lastly, the dredge spoil area changed by +9.06 m/yr. Based on these results, it is recommended that LIDAR surveys for Jackson County's mainland be conducted at least every two years, while surveys of the offshore barrier islands be conducted annually. Furthermore, insufficient LIDAR data for Round Island and the Round Island Marsh Restoration Project highlight these two areas as priority targets for future surveys.

Recent shoreline changes in the Volta River delta, West Africa: the ...

African Journals Online (AJOL)

Spit growth has been accompanied by a wave of erosion over the last century of the immediate downdrift sector of the bight coast, endangering the town of Keta. Erosion since the 1960s may have been aggravated by the construction of the Akosombo hydropower dam. The tip of the spit has recently welded to the shoreline, ...

A Collaborative Geospatial Shoreline Inventory Tool to Guide Coastal Development and Habitat Conservation

Directory of Open Access Journals (Sweden)

Peter Gies

2013-05-01

Full Text Available We are developing a geospatial inventory tool that will guide habitat conservation, restoration and coastal development and benefit several stakeholders who seek mitigation and adaptation strategies to shoreline changes resulting from erosion and sea level rise. The ESRI Geoportal Server, which is a type of web portal used to find and access geospatial information in a central repository, is customized by adding a Geoinventory tool capability that allows any shoreline related data to be searched, displayed and analyzed on a map viewer. Users will be able to select sections of the shoreline and generate statistical reports in the map viewer to allow for comparisons. The tool will also facilitate map-based discussion forums and creation of user groups to encourage citizen participation in decisions regarding shoreline stabilization and restoration, thereby promoting sustainable coastal development.

Hotspot Motion, Before and After the Hawaiian-Emperor Bend

Science.gov (United States)

Tarduno, J. A.; Bono, R. K.

2014-12-01

Hawaiian hotspot motion of >40 mm/yr is best documented by paleomagnetic investigations of basalt cores recovered by ocean drilling of the Emperor seamounts during ODP Leg 197 (Tarduno et al., 2003). These data indicate that the trend of the Emperor Seamounts dominantly records motion of the hotspot in the mantle, further suggesting that the great Hawaiian-Emperor bend (HEB) reflects mainly a change in hotspot motion. Data used for Pacific "absolute plate motion models" for times before the age of the HEB are also internally inconsistent with a fixed hotspot assumption; at present the best way to estimate Pacific absolute plate motion prior to the HEB bend is through use of predictions derived from plate circuits (e.g. Doubrovine and Tarduno, 2008). These analyses predict much less motion for the hotspot responsible for the Louisville Seamount chain, as has been observed by paleomagnetic analyses of cores recovered by IODP Expedition 330 (Koppers et al., 2012). Together, the ocean drilling data sets favor hotspot-specific processes to explain high drift rates, such as the model whereby the Hawaiian mantle plume was captured by a ridge in the Late Cretaceous, and subsequent changes in sub-Pacific mantle flow resulted in the trend of the Emperor Seamounts (Tarduno et al., 2009). However, the question of whether there is a smaller signal of motion between groups of hotspots remains. Plate circuit analyses yield a small discrepancy between predicted and actual hotspot locations for times between ca. 47 Ma and 10 Ma that could be a signal of continued southward migration of the Hawaiian hotspot. Alternatively, this could reflect the motion of the group of Indo-Atlantic hotspots relative to Hawaii. New paleomagnetic data from Midway Atoll (ca. 27 Ma) suggests little difference with the present-day latitude of the plume, indicating that the rate of motion of either the Hawaiian hotspot, or the Indo-Atlantic hotspot group, was about 15 mm/yr between 47 and 27 Ma. This

Variability and correlations of shoreline and dunes on the southern Baltic coast (CRS Lubiatowo, Poland

Directory of Open Access Journals (Sweden)

Zbigniew Pruszak

2011-03-01

Full Text Available The paper analyses the results of field investigations into the evolution of the shoreline and dune toe positions in a multi-bar,dissipative coastal zone. The correlations between the changes in the shoreline and the dune toe range from -0.4 to 0.8. It is most often the case that the dune toe is stable while the shoreline moves. Consistent cross-shore migration is slightly more likelyto happen than the divergent or convergent movements of both lines. Shoreline retreat and advance attain respective rates of 0.7 m day-1 and 0.4 m day-1. Deep-water wave energy of about 50 kJ m-1 constitutes the boundary between shore accumulation and erosion.

Multi-decadal shoreline changes on Takú Atoll, Papua New Guinea: Observational evidence of early reef island recovery after the impact of storm waves

Science.gov (United States)

Mann, Thomas; Westphal, Hildegard

2016-03-01

Hurricanes, tropical cyclones and other high-magnitude events are important steering mechanisms in the geomorphic development of coral reef islands. Sandy reef islands located outside the storm belts are strongly sensitive to the impact of occasional high-magnitude events and show abrupt, commonly erosive geomorphic change in response to such events. Based on the interpretation of remote sensing data, it is well known that the process of landform recovery might take several decades or even longer. However, despite the increasing amount of scientific attention towards short- and long-term island dynamics, the lack of data and models often prevent a robust analysis of the timing and nature of recovery initiation. Here we show how natural island recovery starts immediately after the impact of a high-magnitude event. We analyze multi-temporal shoreline changes on Takú Atoll, Papua New Guinea and combine our findings with a unique set of published field observations (Smithers and Hoeke, 2014). Trends of shoreline change since 1943 and changes in planform island area indicate a long-term accretionary mode for most islands. Apparent shoreline instability is detected for the last decade of analysis, however this can be explained by the impact of storm waves in December 2008 that (temporarily?) masked the long-term trend. The transition from negative to positive rates of change in the aftermath of this storm event is indicative of inherent negative feedback processes that counteract short-term changes in energy input and represent the initiation of island recovery. Collectively, our results support the concept of dynamic rather than static reef islands and clearly demonstrate how short-term processes can influence interpretations of medium-term change.

Living Shorelines: Coastal Resilience with a Blue Carbon Benefit.

Directory of Open Access Journals (Sweden)

Jenny L Davis

Full Text Available Living shorelines are a type of estuarine shoreline erosion control that incorporates native vegetation and preserves native habitats. Because they provide the ecosystem services associated with natural coastal wetlands while also increasing shoreline resilience, living shorelines are part of the natural and hybrid infrastructure approach to coastal resiliency. Marshes created as living shorelines are typically narrow (< 30 m fringing marshes with sandy substrates that are well flushed by tides. These characteristics distinguish living shorelines from the larger meadow marshes in which most of the current knowledge about created marshes was developed. The value of living shorelines for providing both erosion control and habitat for estuarine organisms has been documented but their capacity for carbon sequestration has not. We measured carbon sequestration rates in living shorelines and sandy transplanted Spartina alterniflora marshes in the Newport River Estuary, North Carolina. The marshes sampled here range in age from 12 to 38 years and represent a continuum of soil development. Carbon sequestration rates ranged from 58 to 283 g C m-2 yr-1 and decreased with marsh age. The pattern of lower sequestration rates in older marshes is hypothesized to be the result of a relative enrichment of labile organic matter in younger sites and illustrates the importance of choosing mature marshes for determination of long-term carbon sequestration potential. The data presented here are within the range of published carbon sequestration rates for S. alterniflora marshes and suggest that wide-scale use of the living shoreline approach to shoreline management may come with a substantial carbon benefit.

Observations and modelling of shoreline and multiple sandbar behaviour on a high-energy meso-tidal beach

Science.gov (United States)

Splinter, Kristen D.; Gonzalez, Maria V. G.; Oltman-Shay, Joan; Rutten, Jantien; Holman, Robert

2018-05-01

This contribution describes 10 years of observed sandbar and shoreline cross-shore position variability at a meso-tidal, high energy, multiple sandbar beach. To examine relationships between the temporal variability in shoreline/sandbar position with offshore wave forcing, a simple equilibrium model is applied to these data. The analysis presented in this paper shows that the equilibrium model is skilled at predicting the alongshore-averaged, time-varying position of the shoreline (R = 0.82) and the outer sandbar position (R = 0.75), suggesting that these end members of the nearshore sediment system are most strongly influenced by offshore wave forcing in a predictable, equilibrium-forced manner. The middle and inner bars are hypothesized to act as sediment transport pathways between the shoreline and the outer bar. Prediction of these more transient features by an equilibrium model was less skilful. Model coefficients reveal that these two end members (outer bar and shoreline) in the sediment system act in opposite directions to changes in the annual offshore wave forcing. During high wave events, sediment is removed from the shoreline and deposited in the nearshore sediment system with simultaneous landward retreat of the shoreline and offshore migration of the outer sandbar. While both end member features have cycles at annual and inter-annual scales, their respective equilibrium response factor differs by almost a factor of 10, with the shoreline responding around an inter-annual mean (ϕ = 1000 days) and the outer bar responding around a seasonal mean (ϕ = 170 days). The model accurately predicts shoreline response to both mild (e.g. 2004/05, 2008/09) and extreme (e.g. 2005/06, 2009/10) winter storms, as well as their summer recovery. The more mobile and dynamic outer sandbar is well-modelled during typical winters. Summer onshore sandbar migration of the outer bar in 2005 and 2006 is under-predicted as the system transitioned between a triple (winter) and

Dynamic malaria hotspots in an open cohort in western Kenya.

Science.gov (United States)

Platt, Alyssa; Obala, Andrew A; MacIntyre, Charlie; Otsyula, Barasa; Meara, Wendy Prudhomme O'

2018-01-12

Malaria hotspots, defined as areas where transmission intensity exceeds the average level, become more pronounced as transmission declines. Targeting hotspots may accelerate reductions in transmission and could be pivotal for malaria elimination. Determinants of hotspot location, particularly of their movement, are poorly understood. We used spatial statistical methods to identify foci of incidence of self-reported malaria in a large census population of 64,000 people, in 8,290 compounds over a 2.5-year study period. Regression models examine stability of hotspots and identify static and dynamic correlates with their location. Hotspot location changed over short time-periods, rarely recurring in the same area. Hotspots identified in spring versus fall season differed in their stability. Households located in a hotspot in the fall were more likely to be located in a hotspot the following fall (RR = 1.77, 95% CI: 1.66-1.89), but the opposite was true for compounds in spring hotspots (RR = 0.15, 95% CI: 0.08-0.28). Location within a hotspot was related to environmental and static household characteristics such as distance to roads or rivers. Human migration into a household was correlated with risk of hotspot membership, but the direction of the association differed based on the origin of the migration event.

Medium-term shoreline evolution of the mediterranean coast of Andalusia (SW Spain)

Science.gov (United States)

Liguori, Vincenzo; Manno, Giorgio; Messina, Enrica; Anfuso, Giorgio; Suffo, Miguel

2015-04-01

Coastal environment is a dynamic system in which numerous natural processes are continuously actuating and interacting among them. As a result, geomorphologic, physical and biological characteristics of coastal environments are constantly changing. Such dynamic balance is nowadays seriously threatened by the strong and increasing anthropic pressure that favors erosion processes, and the associated loss of environmental, ecologic and economic aspects. Sandy beaches are the most vulnerable environments in coastal areas. The aim of this work was to reconstruct the historical evolution of the Mediterranean coastline of Andalusia, Spain. The investigated area is about 500 km in length and includes the provinces of Cadiz, Malaga, Granada and Almeria. It is essentially composed by cliffed sectors with sand and gravel pocket beaches constituting independent morphological cells of different dimensions. This study was based on the analysis of aerial photos and satellite images covering a period of 55 years, between 1956 and 2011. Aerial photos were scanned and geo-referenced in order to solve scale and distortion problems. The shoreline was considered and mapped through the identification of the wet / dry sand limit which coincides with the line of maximum run-up; this indicator - representing the shoreline at the moment of the photo - is the most easily identifiable and representative one in microtidal coastal environments. Since shoreline position is linked to beach profile characteristics and to waves, tide and wind conditions at the moment of the photo, such parameters were taken into account in the calculation of shoreline position and changes. Specifically, retreat/accretion changes were reconstructed applying the DSAS method (Digital Shoreline Analysis System) proposed by the US Geological Survey. Significant beach accretion was observed at Playa La Mamola (Granada), with +1 m/y, because the construction of five breakwaters, and at Playa El Cantal (Almeria) and close

NIMS: hotspots on Io during G2

Science.gov (United States)

1996-01-01

The Near Infrared Mapping Spectrometer (NIMS) on the Galileo spacecraft imaged Io at high spectral resolution at a range of 439,000 km (275,000 miles) during the G2 encounter on 7 September 1996. This image shows (on the right) Io as seen in the infrared by NIMS. The image on the left shows the same view from Voyager in 1979. This NIMS image can be compared to the NIMS images from the G1 orbit (June 1996) to monitor changes on Io. The NIMS image is at 4.9 microns, showing thermal emissions from the hotspots. The brightness of the pixels is a function of size and temperature.At least 10 hotspots have been identified and can be matched with surface features. An accurate determination of the position of the hotspot in the vicinity of Shamash Patera is pending. Hotspots are seen in the vicinity of Prometheus, Volund and Marduk, all sites of volcanic plume activity during the Galileo encounters, and also of active plumes in 1979. Temperatures and areas have been calculated for the hotspots shown. Temperatures range from 828 K (1031 F) to 210 K (- 81.4 F). The lowest temperature is significantly higher than the Io background (non-hotspot) surface temperature of about 100 K (-279 F). Hotspot areas range from 6.5 square km (2.5 sq miles) to 40,000 sq km (15,400 sq miles). The hottest hotspots have smallest areas, and the cooler hotspots have the largest areas. NIMS is continuing to observe Io to monitor volcanic activity throughout the Galileo mission.The Galileo mission is managed by the Jet Propulsion Laboratory for NASA's Office of Space Science, Washington, D.C.This image and other images and data received from Galileo are posted on the Galileo mission home page on the World Wide Web at http://galileo.jpl.nasa.gov.

Living Shorelines: Coastal Resilience with a Blue Carbon Benefit.

Science.gov (United States)

Davis, Jenny L; Currin, Carolyn A; O'Brien, Colleen; Raffenburg, Craig; Davis, Amanda

2015-01-01

Living shorelines are a type of estuarine shoreline erosion control that incorporates native vegetation and preserves native habitats. Because they provide the ecosystem services associated with natural coastal wetlands while also increasing shoreline resilience, living shorelines are part of the natural and hybrid infrastructure approach to coastal resiliency. Marshes created as living shorelines are typically narrow (erosion control and habitat for estuarine organisms has been documented but their capacity for carbon sequestration has not. We measured carbon sequestration rates in living shorelines and sandy transplanted Spartina alterniflora marshes in the Newport River Estuary, North Carolina. The marshes sampled here range in age from 12 to 38 years and represent a continuum of soil development. Carbon sequestration rates ranged from 58 to 283 g C m-2 yr-1 and decreased with marsh age. The pattern of lower sequestration rates in older marshes is hypothesized to be the result of a relative enrichment of labile organic matter in younger sites and illustrates the importance of choosing mature marshes for determination of long-term carbon sequestration potential. The data presented here are within the range of published carbon sequestration rates for S. alterniflora marshes and suggest that wide-scale use of the living shoreline approach to shoreline management may come with a substantial carbon benefit.

Evaluating Temporal Consistency in Marine Biodiversity Hotspots.

Science.gov (United States)

Piacenza, Susan E; Thurman, Lindsey L; Barner, Allison K; Benkwitt, Cassandra E; Boersma, Kate S; Cerny-Chipman, Elizabeth B; Ingeman, Kurt E; Kindinger, Tye L; Lindsley, Amy J; Nelson, Jake; Reimer, Jessica N; Rowe, Jennifer C; Shen, Chenchen; Thompson, Kevin A; Heppell, Selina S

2015-01-01

With the ongoing crisis of biodiversity loss and limited resources for conservation, the concept of biodiversity hotspots has been useful in determining conservation priority areas. However, there has been limited research into how temporal variability in biodiversity may influence conservation area prioritization. To address this information gap, we present an approach to evaluate the temporal consistency of biodiversity hotspots in large marine ecosystems. Using a large scale, public monitoring dataset collected over an eight year period off the US Pacific Coast, we developed a methodological approach for avoiding biases associated with hotspot delineation. We aggregated benthic fish species data from research trawls and calculated mean hotspot thresholds for fish species richness and Shannon's diversity indices over the eight year dataset. We used a spatial frequency distribution method to assign hotspot designations to the grid cells annually. We found no areas containing consistently high biodiversity through the entire study period based on the mean thresholds, and no grid cell was designated as a hotspot for greater than 50% of the time-series. To test if our approach was sensitive to sampling effort and the geographic extent of the survey, we followed a similar routine for the northern region of the survey area. Our finding of low consistency in benthic fish biodiversity hotspots over time was upheld, regardless of biodiversity metric used, whether thresholds were calculated per year or across all years, or the spatial extent for which we calculated thresholds and identified hotspots. Our results suggest that static measures of benthic fish biodiversity off the US West Coast are insufficient for identification of hotspots and that long-term data are required to appropriately identify patterns of high temporal variability in biodiversity for these highly mobile taxa. Given that ecological communities are responding to a changing climate and other

Shoreline clean-up methods : biological treatments

Energy Technology Data Exchange (ETDEWEB)

Massoura, S.T. [Oil Spill Response Limited, Southampton (United Kingdom)

2009-07-01

The cleanup of oil spills in shoreline environments is a challenging issue worldwide. Oil spills receive public and media attention, particularly in the event of a coastal impact. It is important to evaluate the efficiency and effectiveness of cleanup methods when defining the level of effort and consequences that are appropriate to remove or treat different types of oil on different shoreline substrates. Of the many studies that have compared different mechanical, chemical and biological treatments for their effectiveness on various types of oil, biological techniques have received the most attention. For that reason, this paper evaluated the effectiveness and effects of shoreline cleanup methods using biological techniques. It summarized data from field experiments and oil spill incidents, including the Exxon Valdez, Sea Empress, Prestige, Grand Eagle, Nakhodka, Guanabara Bay and various Gulf war oil spills. Five major shoreline types were examined, notably rocky intertidal, cobble/pebble/gravel, sand/mud, saltmarsh, and mangrove/sea-grass. The biological techniques that were addressed were nutrient enrichment, hydrocarbon-utilizing bacteria, vegetable oil biosolvents, plants, surf washing, oil-particle interactions and natural attenuation. The study considered the oil type, volume and fate of stranded oil, location of coastal materials, extent of pollution and the impact of biological techniques. The main factors that affect biodegradation of hydrocarbons are the volume, chemical composition and weathering state of the petroleum product as well as the temperature, oxygen availability of nutrients, water salinity, pH level, water content, and microorganisms in the shoreline environment. The interaction of these factors also affect the biodegradation of oil. It was concluded that understanding the fate of stranded oil can help in the development of techniques that improve the weathering and degradation of oil on complex shoreline substrates. 39 refs.

a Study on Variations of Shoreline Changes and Temporal-Spatial Potentiality for Cloud Seeding at Urumia Lake

Science.gov (United States)

Agha Taher, R.; Jafari, M.; Fallah, M.; Alavi, A.

2015-12-01

Protecting the living environment has become one of the greatest human concerns; sudden increase of population, industry and technology development, unrestrained over consumption of the citizens and climate changes, have all caused many problems for mankind. Shores are special zones that are in contact with three Atmosphere, Hydrosphere and Lithosphere environments of earth. Shore lines are of the most important linear features of the earth's surface which have an animated and alive nature. In this regard, optimized management of the shores and environmental protection for stable development require observing the shorelines and their variations. Protection of shorelines within appropriate time periods is of high importance for the purpose of optimized management of the shores. The twenty first century has been called the era of information explosion. A time that, through benefits of new technologies, information experts attempt to generate more and up to date information in various fields and to provide them for managers and decision makers in order to be considered for future planning and also to assist the planners to arrange and set a comprehensive plan. Aerial images and remote sensing technology are economic methods to acquire the required data. Such methods are free from common time and place limitations in survey based methods. Among remote sensing data, the ones acquired from optical images have several benefits which include low cost, interpretation simplicity and ease of access. That is why most of the researches concerning extraction of shorelines are practiced using optical images. On the other hand, wide range coverage of satellite images along with rapid access to them caused these images to be used extensively for extracting the shorelines. The attempt in this research is to use satellite images and their application in order to study variations of the shorelines. Thus, for this purpose, Landsat satellite images from TM and ETM+ sensors in the 35

A STUDY ON VARIATIONS OF SHORELINE CHANGES AND TEMPORAL-SPATIAL POTENTIALITY FOR CLOUD SEEDING AT URUMIA LAKE

Directory of Open Access Journals (Sweden)

R. Agha Taher

2015-12-01

Full Text Available Protecting the living environment has become one of the greatest human concerns; sudden increase of population, industry and technology development, unrestrained over consumption of the citizens and climate changes, have all caused many problems for mankind. Shores are special zones that are in contact with three Atmosphere, Hydrosphere and Lithosphere environments of earth. Shore lines are of the most important linear features of the earth’s surface which have an animated and alive nature. In this regard, optimized management of the shores and environmental protection for stable development require observing the shorelines and their variations. Protection of shorelines within appropriate time periods is of high importance for the purpose of optimized management of the shores. The twenty first century has been called the era of information explosion. A time that, through benefits of new technologies, information experts attempt to generate more and up to date information in various fields and to provide them for managers and decision makers in order to be considered for future planning and also to assist the planners to arrange and set a comprehensive plan. Aerial images and remote sensing technology are economic methods to acquire the required data. Such methods are free from common time and place limitations in survey based methods. Among remote sensing data, the ones acquired from optical images have several benefits which include low cost, interpretation simplicity and ease of access. That is why most of the researches concerning extraction of shorelines are practiced using optical images. On the other hand, wide range coverage of satellite images along with rapid access to them caused these images to be used extensively for extracting the shorelines. The attempt in this research is to use satellite images and their application in order to study variations of the shorelines. Thus, for this purpose, Landsat satellite images from TM and ETM

Decoupling processes and scales of shoreline morphodynamics

Science.gov (United States)

Hapke, Cheryl J.; Plant, Nathaniel G.; Henderson, Rachel E.; Schwab, William C.; Nelson, Timothy R.

2016-01-01

Behavior of coastal systems on time scales ranging from single storm events to years and decades is controlled by both small-scale sediment transport processes and large-scale geologic, oceanographic, and morphologic processes. Improved understanding of coastal behavior at multiple time scales is required for refining models that predict potential erosion hazards and for coastal management planning and decision-making. Here we investigate the primary controls on shoreline response along a geologically-variable barrier island on time scales resolving extreme storms and decadal variations over a period of nearly one century. An empirical orthogonal function analysis is applied to a time series of shoreline positions at Fire Island, NY to identify patterns of shoreline variance along the length of the island. We establish that there are separable patterns of shoreline behavior that represent response to oceanographic forcing as well as patterns that are not explained by this forcing. The dominant shoreline behavior occurs over large length scales in the form of alternating episodes of shoreline retreat and advance, presumably in response to storms cycles. Two secondary responses include long-term response that is correlated to known geologic variations of the island and the other reflects geomorphic patterns with medium length scale. Our study also includes the response to Hurricane Sandy and a period of post-storm recovery. It was expected that the impacts from Hurricane Sandy would disrupt long-term trends and spatial patterns. We found that the response to Sandy at Fire Island is not notable or distinguishable from several other large storms of the prior decade.

Cuspate Shoreline Morphology

National Research Council Canada - National Science Library

McWilliams, Brandon

2005-01-01

Large beach cusps with wavelengths O(200m), sometimes termed mega-cusps, were measured along 18km of the Southern Monterey Bay coastline from October 2004 to April 2005 to investigate the cuspate shoreline response to rip current systems...

Timing of oceans on Mars from shoreline deformation.

Science.gov (United States)

Citron, Robert I; Manga, Michael; Hemingway, Douglas J

2018-03-29

Widespread evidence points to the existence of an ancient Martian ocean. Most compelling are the putative ancient shorelines in the northern plains. However, these shorelines fail to follow an equipotential surface, and this has been used to challenge the notion that they formed via an early ocean and hence to question the existence of such an ocean. The shorelines' deviation from a constant elevation can be explained by true polar wander occurring after the formation of Tharsis, a volcanic province that dominates the gravity and topography of Mars. However, surface loading from the oceans can drive polar wander only if Tharsis formed far from the equator, and most evidence indicates that Tharsis formed near the equator, meaning that there is no current explanation for the shorelines' deviation from an equipotential that is consistent with our geophysical understanding of Mars. Here we show that variations in shoreline topography can be explained by deformation caused by the emplacement of Tharsis. We find that the shorelines must have formed before and during the emplacement of Tharsis, instead of afterwards, as previously assumed. Our results imply that oceans on Mars formed early, concurrent with the valley networks, and point to a close relationship between the evolution of oceans on Mars and the initiation and decline of Tharsis volcanism, with broad implications for the geology, hydrological cycle and climate of early Mars.

Development of Biotechnical Methods to Control Shoreline Erosion

National Research Council Canada - National Science Library

Mays, D

1999-01-01

.... Coconut fiber logs, straw bales wrapped in poultry netting, large round hay bales, and bundled logs anchored to the shoreline were all evaluated for their potential to control wave damage to the shoreline...

SequenceLDhot: detecting recombination hotspots.

Science.gov (United States)

Fearnhead, Paul

2006-12-15

There is much local variation in recombination rates across the human genome--with the majority of recombination occurring in recombination hotspots--short regions of around approximately 2 kb in length that have much higher recombination rates than neighbouring regions. Knowledge of this local variation is important, e.g. in the design and analysis of association studies for disease genes. Population genetic data, such as that generated by the HapMap project, can be used to infer the location of these hotspots. We present a new, efficient and powerful method for detecting recombination hotspots from population data. We compare our method with four current methods for detecting hotspots. It is orders of magnitude quicker, and has greater power, than two related approaches. It appears to be more powerful than HotspotFisher, though less accurate at inferring the precise positions of the hotspot. It was also more powerful than LDhot in some situations: particularly for weaker hotspots (10-40 times the background rate) when SNP density is lower (maths.lancs.ac.uk/~fearnhea/Hotspot.

Historical Shoreline for Louisiana, Geographic NAD83, NOAA (2001) [shoreline_la_NOAA_1986

Data.gov (United States)

Louisiana Geographic Information Center — These data were automated to provide a suitable geographic information system (GIS) data layer depicting the historical shoreline for Louisiana. These data are...

A post-Calumet shoreline along southern Lake Michigan

Science.gov (United States)

Capps, D.K.; Thompson, T.A.; Booth, R.K.

2007-01-01

The southern shore of Lake Michigan is the type area for many of ancestral Lake Michigan's late Pleistocene lake phases, but coastal deposits and features of the Algonquin phase of northern Lake Michigan, Lake Huron, and Lake Superior are not recognized in the area. Isostatic rebound models suggest that Algonquin phase deposits should be 100 m or more below modern lake level. A relict shoreline, however, exists along the lakeward margin of the Calumet Beach that was erosional west of Deep River and depositional east of the river. For this post-Calumet shoreline, the elevation of basal foreshore deposits east of Deep River and the base of the scarp west of Deep River indicate a slightly westward dipping water plane that is centered at ???184 m above mean sea level. Basal foreshore elevations also indicate that lake level fell ???2 m during the development of the shoreline. The pooled mean of radiocarbon dates from the surface of the peat below post-Calumet shoreline foreshore deposits indicate that the lake transgressed over the peat at 10,560 ?? 70 years B.P. Pollen assemblages from the peat are consistent with this age. The elevation and age of the post-Calumet shoreline are similar to the Main Algonquin phase of Lake Huron. Recent isostatic rebound models do not adequately address a high-elevation Algonquin-age shoreline along the southern shore of Lake Michigan, but the Goldthwait (1908) hinge-line model does. ?? 2006 Springer Science+Business Media B.V.

A multisource approach for coastline mapping and identification of shoreline changes

Directory of Open Access Journals (Sweden)

A. Zaccagnino

2006-06-01

Full Text Available Coastal dynamics are driven by phenomena of exogenous and endogenous nature. Characterizing factors that influence their equilibrium and continuous monitoring are fundamental for effective environmental planning and management of coastal areas. In order to monitor shoreline changes, we developed a methodology based on a multisource and multitemporal approach. A database, related to the Ionian coast of Basilicata region (about 50 km, was implemented by using cartographic data (IGMI data, satellite imagery (SPOT-PX/XS, Landsat-TM, Corona and aerial data covering the period form 1949 to 2001. In particular, airborne data (1 m spatial resolution were acquired during a specific campaign we performed in 2000 and 2001. To obtain the best performance from the available data, we applied a data fusion procedure on visible and thermal information. Different algorithms were tested, such as band ratios and clustering for extracting the coastline. The best results from multispectral data were obtained using a threshold algorithm we devised by exploiting the green, red and NIR bands, whereas for panchromatic data we selected clustering as the more suitable method. Moreover, a GPS survey was performed to evaluate the influence of tidal effects.

A micro-epidemiological analysis of febrile malaria in Coastal Kenya showing hotspots within hotspots.

Science.gov (United States)

Bejon, Philip; Williams, Thomas N; Nyundo, Christopher; Hay, Simon I; Benz, David; Gething, Peter W; Otiende, Mark; Peshu, Judy; Bashraheil, Mahfudh; Greenhouse, Bryan; Bousema, Teun; Bauni, Evasius; Marsh, Kevin; Smith, David L; Borrmann, Steffen

2014-04-24

Malaria transmission is spatially heterogeneous. This reduces the efficacy of control strategies, but focusing control strategies on clusters or 'hotspots' of transmission may be highly effective. Among 1500 homesteads in coastal Kenya we calculated (a) the fraction of febrile children with positive malaria smears per homestead, and (b) the mean age of children with malaria per homestead. These two measures were inversely correlated, indicating that children in homesteads at higher transmission acquire immunity more rapidly. This inverse correlation increased gradually with increasing spatial scale of analysis, and hotspots of febrile malaria were identified at every scale. We found hotspots within hotspots, down to the level of an individual homestead. Febrile malaria hotspots were temporally unstable, but 4 km radius hotspots could be targeted for 1 month following 1 month periods of surveillance.DOI: http://dx.doi.org/10.7554/eLife.02130.001. Copyright © 2014, Bejon et al.

36 CFR 327.30 - Shoreline Management on Civil Works Projects.

Science.gov (United States)

2010-07-01

... ADMINISTERED BY THE CHIEF OF ENGINEERS § 327.30 Shoreline Management on Civil Works Projects. (a) Purpose. The... this regulation, shoreline management plans are not required for those projects where construction was... approval, one copy of each project Shoreline Management Plan will be forwarded to HQUSACE (CECW-ON) WASH DC...

Early Cambrian wave-formed shoreline deposits

DEFF Research Database (Denmark)

Clemmensen, Lars B; Glad, Aslaug Clemmensen; Pedersen, Gunver Krarup

2017-01-01

-preserved subaqueous dunes and wave ripples indicates deposition in a wave-dominated upper shoreface (littoral zone) environment, and the presence of interference ripples indicates that the littoral zone environment experienced water level fluctuations due to tides and/or changing meteorological conditions. Discoidal....... During this period, wave-formed shoreline sediments (the Vik Member, Hardeberga Formation) were deposited on Bornholm and are presently exposed at Strøby quarry. The sediments consist of fine- and medium-grained quartz-cemented arenites in association with a few silt-rich mudstones. The presence of well...

NOAA's Shoreline Survey Maps - Raster NOAA-NOS Shoreline Survey Manuscripts that define the shoreline and alongshore natural and man-made features

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NOS coastal survey maps (often called t-sheet or tp-sheet maps) are special use planimetric or topographic maps that precisely define the shoreline and alongshore...

Impact of port structures on the shoreline of Karnataka, west coast, India

Digital Repository Service at National Institute of Oceanography (India)

Deepa, N.; Kunte, P.D.

(GIS) as the location of the shoreline and its historical rate of change can provide important information for the design of coastal protection, plans for coastal development, coastal and social vulnerability study, and the calibration...

Pollination ecology and the possible impacts of environmental change in the Southwest Australian Biodiversity Hotspot

OpenAIRE

Phillips, Ryan D.; Hopper, Stephen D.; Dixon, Kingsley W.

2010-01-01

The Southwest Australian Biodiversity Hotspot contains an exceptionally diverse flora on an ancient, low-relief but edaphically diverse landscape. Since European colonization, the primary threat to the flora has been habitat clearance, though climate change is an impending threat. Here, we review (i) the ecology of nectarivores and biotic pollination systems in the region, (ii) the evidence that trends in pollination strategies are a consequence of characteristics of the landscape, and (iii) ...

Paleo-drainage basin connectivity predicts evolutionary relationships across three Southeast Asian biodiversity hotspots.

Science.gov (United States)

de Bruyn, Mark; Rüber, Lukas; Nylinder, Stephan; Stelbrink, Björn; Lovejoy, Nathan R; Lavoué, Sébastien; Tan, Heok Hui; Nugroho, Estu; Wowor, Daisy; Ng, Peter K L; Siti Azizah, M N; Von Rintelen, Thomas; Hall, Robert; Carvalho, Gary R

2013-05-01

Understanding factors driving diversity across biodiversity hotspots is critical for formulating conservation priorities in the face of ongoing and escalating environmental deterioration. While biodiversity hotspots encompass a small fraction of Earth's land surface, more than half the world's plants and two-thirds of terrestrial vertebrate species are endemic to these hotspots. Tropical Southeast (SE) Asia displays extraordinary species richness, encompassing four biodiversity hotspots, though disentangling multiple potential drivers of species richness is confounded by the region's dynamic geological and climatic history. Here, we use multilocus molecular genetic data from dense multispecies sampling of freshwater fishes across three biodiversity hotspots, to test the effect of Quaternary climate change and resulting drainage rearrangements on aquatic faunal diversification. While Cenozoic geological processes have clearly shaped evolutionary history in SE Asian halfbeak fishes, we show that paleo-drainage re-arrangements resulting from Quaternary climate change played a significant role in the spatiotemporal evolution of lowland aquatic taxa, and provide priorities for conservation efforts.

Hotspots on Io During the Ganymede 2 Encounter

Science.gov (United States)

1996-01-01

The Near Infrared Mapping Spectrometer (NIMS) on the Galileo spacecraft imaged Io at high spectral resolution at a range of 439,000 km (275,000 miles) during the G2 encounter on 6 September 1996. This image shows, on the right, Io as seen by NIMS, centered on 150 W longitude. The image on the left shows the same view point from Voyager data (from the encounters in 1979 and 1980). The NIMS image can be compared to the NIMS hotspot image from the G1 orbit (June 1996) to monitor changes on Io. The most dramatic feature of the G2 image is the hotspot at Malik Patera. Preliminary analysis of the data yields a temperature of at least 1000 K (727 C) for this hotspot, an increase of more than 300 K from the G1 encounter. In the overlap area of the G1 and G2 images all the hotspots seen during the G1 encounter are also seen in the G2 image. Other hotspots were seen, including one at the Pele plume origin site. This image is at the 4 micron band to best view the Malik hotspot. Most of the other hotspots are best seen at longer wavelengths. NIMS is continuing to observe Io to monitor volcanic activity throughout the Galileo mission.The Jet Propulsion Laboratory, Pasadena, CA manages the mission for NASA's Office of Space Science, Washington, DC.This image and other images and data received from Galileo are posted on the World Wide Web, on the Galileo mission home page at URL http://galileo.jpl.nasa.gov.

Hotspot swells revisited

Science.gov (United States)

King, Scott D.; Adam, Claudia

2014-10-01

The first attempts to quantify the width and height of hotspot swells were made more than 30 years ago. Since that time, topography, ocean-floor age, and sediment thickness datasets have improved considerably. Swell heights and widths have been used to estimate the heat flow from the core-mantle boundary, constrain numerical models of plumes, and as an indicator of the origin of hotspots. In this paper, we repeat the analysis of swell geometry and buoyancy flux for 54 hotspots, including the 37 considered by Sleep (1990) and the 49 considered by Courtillot et al. (2003), using the latest and most accurate data. We are able to calculate swell geometry for a number of hotspots that Sleep was only able to estimate by comparison with other swells. We find that in spite of the increased resolution in global bathymetry models there is significant uncertainty in our calculation of buoyancy fluxes due to differences in our measurement of the swells’ width and height, the integration method (volume integration or cross-sectional area), and the variations of the plate velocities between HS2-Nuvel1a (Gripp and Gordon, 1990) and HS3-Nuvel1a (Gripp and Gordon, 2002). We also note that the buoyancy flux for Pacific hotspots is in general larger than for Eurasian, North American, African and Antarctic hotspots. Considering that buoyancy flux is linearly related to plate velocity, we speculate that either the calculation of buoyancy flux using plate velocity over-estimates the actual vertical flow of material from the deep mantle or that convection in the Pacific hemisphere is more vigorous than the Atlantic hemisphere.

Eureka Littoral Cell CRSMP Humboldt Bay Shoreline Types 2011

Data.gov (United States)

California Natural Resource Agency — In 2011 Aldaron Laird walked and kayaked the entire shoreline of Humboldt Bay mapping the shoreline conditions onto 11x17 laminated fieldmaps at a scale of 1' = 200'...

Global warming and extinctions of endemic species from biodiversity hotspots.

Science.gov (United States)

Malcolm, Jay R; Liu, Canran; Neilson, Ronald P; Hansen, Lara; Hannah, Lee

2006-04-01

Global warming is a key threat to biodiversity, but few researchers have assessed the magnitude of this threat at the global scale. We used major vegetation types (biomes) as proxies for natural habitats and, based on projected future biome distributions under doubled-CO2 climates, calculated changes in habitat areas and associated extinctions of endemic plant and vertebrate species in biodiversity hotspots. Because of numerous uncertainties in this approach, we undertook a sensitivity analysis of multiple factors that included (1) two global vegetation models, (2) different numbers of biome classes in our biome classification schemes, (3) different assumptions about whether species distributions were biome specific or not, and (4) different migration capabilities. Extinctions were calculated using both species-area and endemic-area relationships. In addition, average required migration rates were calculated for each hotspot assuming a doubled-CO2 climate in 100 years. Projected percent extinctions ranged from hotspots were the Cape Floristic Region, Caribbean, Indo-Burma, Mediterranean Basin, Southwest Australia, and Tropical Andes, where plant extinctions per hotspot sometimes exceeded 2000 species. Under the assumption that projected habitat changes were attained in 100 years, estimated global-warming-induced rates of species extinctions in tropical hotspots in some cases exceeded those due to deforestation, supporting suggestions that global warming is one of the most serious threats to the planet's biodiversity.

MODIS Hotspot Validation over Thailand

Directory of Open Access Journals (Sweden)

Veerachai Tanpipat

2009-11-01

Full Text Available To ensure remote sensing MODIS hotspot (also known as active fire products or hotspots quality and precision in forest fire control and management in Thailand, an increased level of confidence is needed. Accuracy assessment of MODIS hotspots utilizing field survey data validation is described. A quantitative evaluation of MODIS hotspot products has been carried out since the 2007 forest fire season. The carefully chosen hotspots were scattered throughout the country and within the protected areas of the National Parks and Wildlife Sanctuaries. Three areas were selected as test sites for validation guidelines. Both ground and aerial field surveys were also conducted in this study by the Forest Fire Control Division, National Park, Wildlife and Plant Conversation Department, Ministry of Natural Resources and Environment, Thailand. High accuracy of 91.84 %, 95.60% and 97.53% for the 2007, 2008 and 2009 fire seasons were observed, resulting in increased confidence in the use of MODIS hotspots for forest fire control and management in Thailand.

Simulation of shoreline development in a groyne system, with a case study Sanur Bali beach

Science.gov (United States)

Gunawan, P. H.; Pudjaprasetya, S. R.

2018-03-01

The process of shoreline changes due to transport of sediment by littoral drift is studied in this paper. Pelnard-Considère is the commonly adopted model. This model is based on the principle of sediment conservation, without diffraction. In this research, we adopt the Pelnard-Considère equation with diffraction, and a numerical scheme based on the finite volume method is implemented. Shoreline development in a groyne system is then simulated. For a case study, the Sanur Bali Beach, Indonesia is considered, in which from Google Earth photos, the beach experiences changes of coastline caused by sediment trapped in a groyne system.

A spatially explicit assessment of current and future hotspots of hunger in Sub-Saharan Africa in the context of global change

Science.gov (United States)

Liu, Junguo; Fritz, Steffen; van Wesenbeeck, C. F. A.; Fuchs, Michael; You, Liangzhi; Obersteiner, Michael; Yang, Hong

2008-12-01

Hunger knows no boundaries or borders. While much research has focused on undernutrition on a national scale, this report evaluates it at subnational levels for Sub-Saharan Africa (SSA) to pinpoint hotspots where the greatest challenges exist. Undernutrition is assessed with a spatial resolution of 30 arc-minutes by investigating anthropometric data on weight and length of individuals. The impact of climate change on production of six major crops (cassava, maize, wheat, sorghum, rice and millet) is analyzed with a GIS-based Environmental Policy Integrated Climate (GEPIC) model with the same spatial resolution. Future hotspots of hunger are projected in the context of the anticipated climate, social, economic, and bio-physical changes. The results show that some regions in northern and southwestern Nigeria, Sudan and Angola with a currently high number of people with undernutrition might be able to improve their food security situation mainly through increasing purchasing power. In the near future, regions located in Ethiopia, Uganda, Rwanda and Burundi, southwestern Niger, and Madagascar are likely to remain hotspots of food insecurity, while regions located in Tanzania, Mozambique and the Democratic Republic of Congo might face more serious undernutrition. It is likely that both the groups of regions will suffer from lower capacity of importing food as well as lower per capita calorie availability, while the latter group will probably have sharper reduction in per capita calorie availability. Special attention must be paid to the hotspot areas in order to meet the hunger alleviation goals in SSA.

Food Security Hotspots in India under Changing Climate and Growing Populatio

Science.gov (United States)

Singh, N.; Cherkauer, K. A.; Ashfaq, M.; Rastogi, D.

2015-12-01

Global climate change, unprecedented population growth, and rapid urbanization have elevated the possibility of food and water shortages in many regions across the world. The likelihood of such shortages in the future is further exacerbated by the fact that increased greenhouse forcing and rapid growth in human population will continue for at least the next several decades. These socio-environmental changes will likely put some regions under enormous economic and environmental stress by forcing them to adapt to new conditions. India with its rapidly growing population and high rates of urbanization and industrialization is one such region whose agricultural resources will be particularly vulnerable to the impact of these changes. This study collectively reviews and analyses the possible impacts of climate change, population growth and resulting land use change on the availability of food and water in the coming decades for India. By analyzing and fusing a wide variety of existing data and research on the impact of land use change, population, and climate change, on water and food resources this study develops an understanding of the broader implications of each of the changes on food security in the region. In addition, the study focuses on the need to assess and quantify the combination of such impacts at a regional level and identify food security hotspots spatially across India that will help to narrow down regions in the country which will be severely affected and need priority adaptation and mitigation measures.

Warfare in biodiversity hotspots.

Science.gov (United States)

Hanson, Thor; Brooks, Thomas M; Da Fonseca, Gustavo A B; Hoffmann, Michael; Lamoreux, John F; Machlis, Gary; Mittermeier, Cristina G; Mittermeier, Russell A; Pilgrim, John D

2009-06-01

Conservation efforts are only as sustainable as the social and political context within which they take place. The weakening or collapse of sociopolitical frameworks during wartime can lead to habitat destruction and the erosion of conservation policies, but in some cases, may also confer ecological benefits through altered settlement patterns and reduced resource exploitation. Over 90% of the major armed conflicts between 1950 and 2000 occurred within countries containing biodiversity hotspots, and more than 80% took place directly within hotspot areas. Less than one-third of the 34 recognized hotspots escaped significant conflict during this period, and most suffered repeated episodes of violence. This pattern was remarkably consistent over these 5 decades. Evidence from the war-torn Eastern Afromontane hotspot suggests that biodiversity conservation is improved when international nongovernmental organizations support local protected area staff and remain engaged throughout the conflict. With biodiversity hotspots concentrated in politically volatile regions, the conservation community must maintain continuous involvement during periods of war, and biodiversity conservation should be incorporated into military, reconstruction, and humanitarian programs in the world's conflict zones. ©2009 Society for Conservation Biology.

Ancient shoreline reconstruction at a Maritime Maya Port in Yucatan, Mexico

Science.gov (United States)

Jaijel, Roy; Goodman, Beverly; Glover, Jeffrey; Rissolo, Dominique; Beddows, Patricia; Carter, Alice; Smith, Derek; Ben Avraham, Zvi

2017-04-01

Throughout history, worldwide, a major part of the human experience has been to adapt to changing landscapes, and environments. These adaptations can take many forms, sometimes as innovation, manipulation of the conditions, behavioral or technological changes; and in some cases the decision to abandon the area. The northeastern Yucatan peninsula, home of the Maritime maya port site Vista-Alegre, shows signs of such human changes, though little is known about the corresponding landscape and environment. Vista Alegre is located on the meeting point of the Caribbean Sea and the Gulf of Mexico, at the north-eastern tip of the Yucatan peninsula, in the back of the Holbox lagoon. The site was inhabited from the 9th century B.C until the mid 16th century A.D., with an apparent two century abandonment phase from the mid 7th to 9th century A.D. A multidisciplinary effort ("Costa Escondida project") has been investigating the life of past Mayan inhabitants and the broader connections of the site to the Maritime Maya trade network. One of the questions that has arisen is what were the mutual influences between the inhabitants to their surrounding environment. In order to answer that question the site's shoreline geomorphology and climate history is being reconstructed for the past 2-3000 years. The reconstruction is based on multiproxy analysis of marine sediment cores and surface samples, combined with archaeological data. The study presented focuses on the shoreline shifts at the site, revealing the complexity, and significant affect of sea level rise on the marine environment of Vista Alegre. This study contributes to our understanding of the site's possible functions, the environmental challenges the local inhabits contended with, and the identification of ancient harboring locations. The results show five depositional phases over the past 2-3000 years. The ancient shoreline maps show a general trend of sea level rise, though with varying rates over time that relates well

Sea-level rise and shoreline retreat: time to abandon the Bruun Rule

Science.gov (United States)

Cooper, J. Andrew G.; Pilkey, Orrin H.

2004-11-01

In the face of a global rise in sea level, understanding the response of the shoreline to changes in sea level is a critical scientific goal to inform policy makers and managers. A body of scientific information exists that illustrates both the complexity of the linkages between sea-level rise and shoreline response, and the comparative lack of understanding of these linkages. In spite of the lack of understanding, many appraisals have been undertaken that employ a concept known as the "Bruun Rule". This is a simple two-dimensional model of shoreline response to rising sea level. The model has seen near global application since its original formulation in 1954. The concept provided an advance in understanding of the coastal system at the time of its first publication. It has, however, been superseded by numerous subsequent findings and is now invalid. Several assumptions behind the Bruun Rule are known to be false and nowhere has the Bruun Rule been adequately proven; on the contrary several studies disprove it in the field. No universally applicable model of shoreline retreat under sea-level rise has yet been developed. Despite this, the Bruun Rule is in widespread contemporary use at a global scale both as a management tool and as a scientific concept. The persistence of this concept beyond its original assumption base is attributed to the following factors: Appeal of a simple, easy to use analytical model that is in widespread use. Difficulty of determining the relative validity of 'proofs' and 'disproofs'. Ease of application. Positive advocacy by some scientists. Application by other scientists without critical appraisal. The simple numerical expression of the model. Lack of easy alternatives. The Bruun Rule has no power for predicting shoreline behaviour under rising sea level and should be abandoned. It is a concept whose time has passed. The belief by policy makers that it offers a prediction of future shoreline position may well have stifled much

Potential for shoreline changes due to sea-level rise along the U.S. mid-Atlantic region

Science.gov (United States)

Gutierrez, Benjamin T.; Williams, S. Jeffress; Thieler, E. Robert

2007-01-01

Sea-level rise over the next century is expected to contribute significantly to physical changes along open-ocean shorelines. Predicting the form and magnitude of coastal changes is important for understanding the impacts to humans and the environment. Presently, the ability to predict coastal changes is limited by the scientific understanding of the many variables and processes involved in coastal change, and the lack of consensus regarding the validity of existing conceptual, analytical, or numerical models. In order to assess potential future coastal changes in the mid-Atlantic U.S. for the U.S. Climate Change Science Program (CCSP), a workshop was convened by the U.S. Geological Survey. Assessments of future coastal change were made by a committee of coastal scientists with extensive professional experience in the mid-Atlantic region. Thirteen scientists convened for a two-day meeting to exchange information and develop a consensus opinion on potential future coastal changes for the mid-Atlantic coast in response to sea-level rise. Using criteria defined in past work, the mid-Atlantic coast was divided into four geomorphic compartments: spits, headlands, wave-dominated barriers, and mixed-energy barriers. A range of potential coastal responses was identified for each compartment based on four sea-level rise scenarios. The four scenarios were based on the assumptions that: a) the long-term sea-level rise rate observed over the 20th century would persist over the 21st century, b) the 20th century rate would increase by 2 mm/yr, c) the 20th century rate would increase by 7 mm/yr, or d) sea-level would rise by 2 m over the next few hundred years. Potential responses to these sea-level rise scenarios depend on the landforms that occur within a region and include increased likelihood for erosion and shoreline retreat for all coastal types, increased likelihood for erosion, overwash and inlet breaching for barrier islands, as well as the possibility of a threshold

A Global Moving Hotspot Reference Frame: How well it fits?

Science.gov (United States)

Doubrovine, P. V.; Steinberger, B.; Torsvik, T. H.

2010-12-01

Since the early 1970s, when Jason Morgan proposed that hotspot tracks record motion of lithosphere over deep-seated mantle plumes, the concept of fixed hotspots has dominated the way we think about absolute plate reconstructions. In the last decade, with compelling evidence for southward drift of the Hawaiian hotspot from paleomagnetic studies, and for the relative motion between the Pacific and Indo-Atlantic hotspots from refined plate circuit reconstructions, the perception changed and a global moving hotspot reference frame (GMHRF) was introduced, in which numerical models of mantle convection and advection of plume conduits in the mantle flow were used to estimate hotspot motion. This reference frame showed qualitatively better performance in fitting hotspot tracks globally, but the error analysis and formal estimates of the goodness of fitted rotations were lacking in this model. Here we present a new generation of the GMHRF, in which updated plate circuit reconstructions and radiometric age data from the hotspot tracks were combined with numerical models of plume motion, and uncertainties of absolute plate rotations were estimated through spherical regression analysis. The overall quality of fit was evaluated using a formal statistical test, by comparing misfits produced by the model with uncertainties assigned to the data. Alternative plate circuit models linking the Pacific plate to the plates of Indo-Atlantic hemisphere were tested and compared to the fixed hotspot models with identical error budgets. Our results show that, with an appropriate choice of the Pacific plate circuit, it is possible to reconcile relative plate motions and modeled motions of mantle plumes globally back to Late Cretaceous time (80 Ma). In contrast, all fixed hotspot models failed to produce acceptable fits for Paleogene to Late Cretaceous time (30-80 Ma), highlighting significance of relative motion between the Pacific and Indo-Atlantic hotspots during this interval. The

Hotspots in Hindsight

Science.gov (United States)

Julian, B. R.; Foulger, G. R.; Hatfield, O.; Jackson, S.; Simpson, E.; Einbeck, J.; Moore, A.

2014-12-01

Torsvik et al. [2006] suggest that the original locations of large igneous provinces ("LIPs") and kimberlites, and current locations of melting anomalies (hot-spots) lie preferentially above the margins of two Large Lower-Mantle Shear Velocity Provinces" (LLSVPs), at the base of the mantle, and that the correlation has a high significance level (> 99.9999%). They conclude the LLSVP margins are Plume-Generation Zones, and deep-mantle plumes cause hotspots and LIPs. This conclusion raises questions about what physical processes could be responsible, because, for example the LLSVPs are likely dense and not abnormally hot [Trampert et al., 2004]. The supposed LIP-hotspot-LLSVP correlations probably are examples of the "Hindsight Heresy" [Acton, 1959], of basing a statistical test upon the same data sample that led to the initial formulation of a hypothesis. In doing this, many competing hypotheses will have been considered and rejected, but this fact will not be taken into account in statistical assessments. Furthermore, probabilities will be computed for many subsets and combinations of the data, and the best-correlated cases will be cited, but this fact will not be taken into account either. Tests using independent hot-spot catalogs and mantle models suggest that the actual significance levels of the correlations are two or three orders of magnitude smaller than claimed. These tests also show that hot spots correlate well with presumably shallowly rooted features such as spreading plate boundaries. Consideration of the kimberlite dataset in the context of geological setting suggests that their apparent association with the LLSVP margins results from the fact that the Kaapvaal craton, the site of most of the kimberlites considered, lies in Southern Africa. These observations raise questions about the distinction between correlation and causation and underline the necessity to take geological factors into account. Fig: Left: Cumulative distributions of distances from

Hotspot uranium metallogenesis in south China

International Nuclear Information System (INIS)

Li Ziying

2006-01-01

The basic concepts of mantle plume and hotspots are expounded and the hotspots are classified into continental and oceanic types. The relationship between hotspots and metallogenesis are briefly discussed, and a new theory of uranium metallogenesis related to hotspots has been put forward. The geotectonism, magmatism, sedimentation, metamorphism and metallogenesis must be closely associated with deep geodynamics of mantle plume tectonics in Meso-Cenozoic period from 220 Ma to 50 Ma in South China. The eastern part of Guidong granite massif has been proved to be a Mesozoic hotspot from aspects of geological, geophysical and geochemical evidences and its correspondent relationship to uranium metallogenesis is discussed. Finally, the uranium metallogenetic prospect has been pointed out for hydrothermal uranium mineralization in South China from the view point of hotspot uranium metallogenesis. (authors)

Driftcretions: The legacy impacts of driftwood on shoreline morphology

Science.gov (United States)

Kramer, Natalie; Wohl, Ellen

2015-07-01

This research demonstrates how vegetation interacts with physical processes to govern landscape development. We quantify and describe interactions among driftwood, sedimentation, and vegetation for Great Slave Lake, which is used as proxy for shoreline dynamics and landforms before deforestation and wood removal along major waterways. We introduce driftcretion to describe large, persistent concentrations of driftwood that interact with vegetation and sedimentation to influence shoreline evolution. We report the volume and distribution of driftwood along shorelines, the morphological impacts of driftwood delivery throughout the Holocene, and rates of driftwood accretion. Driftcretions facilitate the formation of complex, diverse morphologies that increase biological productivity and organic carbon capture and buffer against erosion. Driftcretions should be common on shorelines receiving a large wood supply and with processes which store wood permanently. We encourage others to work in these depositional zones to understand the physical and biological impacts of large wood export from river basins.

Hotspot identification of trans-boundary water conflict due to anthropogenic water use and climate change in the future

Science.gov (United States)

Ueki, A.; Yoshikawa, S.; Kanae, S.

2014-12-01

A significant fraction of world population is projected to experience increased water stress in response　to the combined effects of population growth and climate change. Some previous studies have suggested that high water stress had significant causality for civil war, and militarized conflict and trans-boundary water conflict in international river basin. On the other hand, some previous empirical analyses have found that institutionalization (e.g., specific provisions in trans-boundary freshwater treaties) in international river basin was associated with a lower risk of water conflicts during water scarcity. The purpose of this study is to identify these water conflict "hotspots", integrating institutional and governance mechanisms of adaptations to impact of water stress. These adaptations is classified to 4 abilities and skills and then used to calculate the adaptive capacity. The adaptive capacity includes the way to manage water conflict effectively, plan to deal with　uncertainty in the future, alter current situation and create institutionalization with common perspective throughout the whole activities. This study identifies water conflict "hotspots" by combining high water stress areas projected by a global water resource model and a lower degree of the adaptive capacity. This study finds that 9 water conflict "hotspots" in Africa, Asia and South America.

County Boundaries with Shorelines (National)

Data.gov (United States)

Department of Transportation — County boundaries with shorelines cut in (NTAD). The TIGER/Line Files are shapefiles and related database files (.dbf) that are an extract of selected geographic and...

Decadal shoreline changes in the muddy coastline of Ondo State, Nigeria

Directory of Open Access Journals (Sweden)

TEMITOPE D. TIMOTHY OYEDOTUN

2015-12-01

Full Text Available Modifications du littoral décennales dans le l ittoral boueux de l'Etat d'Ondo , Nigeria . Les changements dans les positions du rivage à proximité du littoral boueux de l'Etat d'Ondo (sud - ouest du Nigeria sont étudiés, entre 1972 et 2014. Les mouvements de l'eau (HW rivage haut ont été étudiés en utilisant le système n umérique Shoreline Analyse (DSAS, une extension ArcGIS développé par l'USGS. Les ensembles de données comprend plusieurs éditions de photographie de Landsat et le Nigeria Imageries satellite. le Shoreline délimitées les unes des images année inclus les po sitions de HW, qui ont été calculées à partir du rivage Mouvement net (NSM et End Point Noter (EPR, le taux annuel de mouvement. Les résultats préliminaires montrent que les rivages de Ondo côte État ont connu un mouvement vers la terre constante au cour s des quatre décennies. Ces changements sont attribués à des attaques d'onde, l'augmentation des niveaux des marées dans le golfe de l'Atlantique du Bénin, la récente hausse du niveau de la mer, canalisation de la rivière qui réduisent le transport de sédi ments dans la zone côtière, l'extraction historique probable de sable et d'autres activités anthropiques dans la zone côtière.

Monitoring oiled shorelines in Prince William Sound Alaska, following the Exxon Valdez oil spill

International Nuclear Information System (INIS)

Gilfillan, E.S.; Page, D.S.; Harner, E.J.; Boehm, P.D.; Stoker, S.W.

1993-01-01

Three types of shoreline monitoring programs were employed to evaluate the recovery of the ecological communities of Prince William Sound (PWS) shorelines after the oil spill: (a) Extensive shoreline surveys conducted (1989--1992) over much of the oiled shoreline to define extent of shoreline oiling and to assess biological conditions; (b) Detailed sampling in 1989 at nonrandomly chosen locations representing a range of oiling conditions (c) Comprehensive shoreline ecology program initiated in 1990 to assess shoreline recovery in Prince William Sound using (1) a rigorous stratified random sampling study design with 64 sites representing 4 shoreline habitats and 4 oiling levels (unoiled, light, moderate, heavy); (2) periodic sampling at 12 nonrandomly chosen sites of particular concern. Biological communities were analyzed to detect differences due to oiling in each of 16 habitat/tide zone combinations. Following the spill, populations of all major species survived as sources for recolonization. Recruitment to oiled shores began in summer 1989. By 1990, shoreline biota in PWS had largely recovered. Estimates of shoreline recovery (biological community indistinguishable from reference) ranged from 91% based on univariate analysis of standard community parameters to 73% based on multivariate correspondence analysis

Global mammal distributions, biodiversity hotspots, and conservation.

Science.gov (United States)

Ceballos, Gerardo; Ehrlich, Paul R

2006-12-19

Hotspots, which have played a central role in the selection of sites for reserves, require careful rethinking. We carried out a global examination of distributions of all nonmarine mammals to determine patterns of species richness, endemism, and endangerment, and to evaluate the degree of congruence among hotspots of these three measures of diversity in mammals. We then compare congruence of hotspots in two animal groups (mammals and birds) to assess the generality of these patterns. We defined hotspots as the richest 2.5% of cells in a global equal-area grid comparable to 1 degrees latitude x 1 degrees longitude. Hotspots of species richness, "endemism," and extinction threat were noncongruent. Only 1% of cells and 16% of species were common to the three types of mammalian hotspots. Congruence increased with increases in both the geographic scope of the analysis and the percentage of cells defined as being hotspots. The within-mammal hotspot noncongruence was similar to the pattern recently found for birds. Thus, assigning global conservation priorities based on hotspots is at best a limited strategy.

New Tests of the Fixed Hotspot Approximation

Science.gov (United States)

Gordon, R. G.; Andrews, D. L.; Horner-Johnson, B. C.; Kumar, R. R.

2005-05-01

We present new methods for estimating uncertainties in plate reconstructions relative to the hotspots and new tests of the fixed hotspot approximation. We find no significant motion between Pacific hotspots, on the one hand, and Indo-Atlantic hotspots, on the other, for the past ~ 50 Myr, but large and significant apparent motion before 50 Ma. Whether this motion is truly due to motion between hotspots or alternatively due to flaws in the global plate motion circuit can be tested with paleomagnetic data. These tests give results consistent with the fixed hotspot approximation and indicate significant misfits when a relative plate motion circuit through Antarctica is employed for times before 50 Ma. If all of the misfit to the global plate motion circuit is due to motion between East and West Antarctica, then that motion is 800 ± 500 km near the Ross Sea Embayment and progressively less along the Trans-Antarctic Mountains toward the Weddell Sea. Further paleomagnetic tests of the fixed hotspot approximation can be made. Cenozoic and Cretaceous paleomagnetic data from the Pacific plate, along with reconstructions of the Pacific plate relative to the hotspots, can be used to estimate an apparent polar wander (APW) path of Pacific hotspots. An APW path of Indo-Atlantic hotspots can be similarly estimated (e.g. Besse & Courtillot 2002). If both paths diverge in similar ways from the north pole of the hotspot reference frame, it would indicate that the hotspots have moved in unison relative to the spin axis, which may be attributed to true polar wander. If the two paths diverge from one another, motion between Pacific hotspots and Indo-Atlantic hotspots would be indicated. The general agreement of the two paths shows that the former is more important than the latter. The data require little or no motion between groups of hotspots, but up to ~10 mm/yr of motion is allowed within uncertainties. The results disagree, in particular, with the recent extreme interpretation of

Hotspots of climate change impacts in sub-Saharan Africa and implications for adaptation and development.

Science.gov (United States)

Müller, Christoph; Waha, Katharina; Bondeau, Alberte; Heinke, Jens

2014-08-01

Development efforts for poverty reduction and food security in sub-Saharan Africa will have to consider future climate change impacts. Large uncertainties in climate change impact assessments do not necessarily complicate, but can inform development strategies. The design of development strategies will need to consider the likelihood, strength, and interaction of climate change impacts across biosphere properties. We here explore the spread of climate change impact projections and develop a composite impact measure to identify hotspots of climate change impacts, addressing likelihood and strength of impacts. Overlapping impacts in different biosphere properties (e.g. flooding, yields) will not only claim additional capacity to respond, but will also narrow the options to respond and develop. Regions with severest projected climate change impacts often coincide with regions of high population density and poverty rates. Science and policy need to propose ways of preparing these areas for development under climate change impacts. © 2014 John Wiley & Sons Ltd.

Protein Determinants of Meiotic DNA Break Hotspots

Science.gov (United States)

Fowler, Kyle R.; Gutiérrez-Velasco, Susana

2013-01-01

SUMMARY Meiotic recombination, crucial for proper chromosome segregation and genome evolution, is initiated by programmed DNA double-strand breaks (DSBs) in yeasts and likely all sexually reproducing species. In fission yeast, DSBs occur up to hundreds of times more frequently at special sites, called hotspots, than in other regions of the genome. What distinguishes hotspots from cold regions is an unsolved problem, although transcription factors determine some hotspots. We report the discovery that three coiled-coil proteins – Rec25, Rec27, and Mug20 – bind essentially all hotspots with unprecedented specificity even without DSB formation. These small proteins are components of linear elements, are related to synaptonemal complex proteins, and are essential for nearly all DSBs at most hotspots. Our results indicate these hotspot determinants activate or stabilize the DSB-forming protein Rec12 (Spo11 homolog) rather than promote its binding to hotspots. We propose a new paradigm for hotspot determination and crossover control by linear element proteins. PMID:23395004

Biological conditions of shorelines following the Exxon Valdez spill

International Nuclear Information System (INIS)

Stoker, S.W.; Neff, J.M.; Schroeder, T.R.; McCormick, D.M.

1993-01-01

This report is based primarily on survey results from Prince William Sound, where most of the heavy shoreline oiling occurred. Although not strictly quantitative, the shoreline surveys provide an unprecedented, broad base of professional observations covering the entire spill-affected area from 1989 through 1992 by which to evaluate spill impacts and recovery. Shoreline surveys documented that the extent of shoreline oiling declined substantially from 1989 to 1992. In 1989, oil was found on about 16 percent of the 3,000 miles of shoreline in Prince William Sound; by the spring of 1991, oil was found on only about 2 percent of the shoreline; and by May of 1992, on only 0.2 percent. In all years, most of this oil was located in the biologically least productive upper intertidal and supratidal zones. In both 1991 and 1992, small, isolated pockets of subsurface oil were found on some boulder/cobble beaches. Most of these deposits were also located in the upper intertidal and were usually buried beneath clean sediments. In almost all cases, the condition of intertidal biological communities improved correspondingly from 1989 to 1992. By the spring of 1991, recovery appeared to be well under way on virtually all previously oiled shores, with species composition, abundance, and diversity levels usually comparable to those of nearby shores that were not oiled in 1989. Recruitment of intertidal plants and animals was observed as early as the summer of 1989, and increasingly through 1991 and 1992. Recruitment was evident even in areas with remnant deposits of surface and subsurface oil, indicating that toxicity levels of the oil had declined substantially and that, in most cases, the residual oil no longer interfered with biological recovery. Observations of birds and marine mammals on or near shorelines surveyed during 1991 and 1992 confirmed that species present before the spill were still present and were feeding and reproducing in areas affected by oil in 1989

HOTSPOTS DETECTION FROM TRAJECTORY DATA BASED ON SPATIOTEMPORAL DATA FIELD CLUSTERING

Directory of Open Access Journals (Sweden)

K. Qin

2017-09-01

Full Text Available City hotspots refer to the areas where residents visit frequently, and large traffic flow exist, which reflect the people travel patterns and distribution of urban function area. Taxi trajectory data contain abundant information about urban functions and citizen activities, and extracting interesting city hotspots from them can be of importance in urban planning, traffic command, public travel services etc. To detect city hotspots and discover a variety of changing patterns among them, we introduce a data field-based cluster analysis technique to the pick-up and drop-off points of taxi trajectory data and improve the method by introducing the time weight, which has been normalized to estimate the potential value in data field. Thus, in the light of the new potential function in data field, short distance and short time difference play a powerful role. So the region full of trajectory points, which is regarded as hotspots area, has a higher potential value, while the region with thin trajectory points has a lower potential value. The taxi trajectory data of Wuhan city in China on May 1, 6 and 9, 2015, are taken as the experimental data. From the result, we find the sustaining hotspots area and inconstant hotspots area in Wuhan city based on the spatiotemporal data field method. Further study will focus on optimizing parameter and the interaction among hotspots area.

Power Scaling of the Mainland Shoreline of the Atlantic Coast of the United States

Science.gov (United States)

Vasko, E.; Barton, C. C.; Geise, G. R.; Rizki, M. M.

2017-12-01

The fractal dimension of the mainland shoreline of the Atlantic coast of the United Stated from Maine to Homestead, FL has been measured in 1000 km increments using the box-counting method. The shoreline analyzed is the NOAA Medium Resolution Shoreline (https://shoreline.noaa.gov/data/datasheets/medres.html). The shoreline was reconstituted into sequentially numbered X-Y coordinate points in UTM Zone 18N which are spaced 50 meters apart, as measured continuously along the shoreline. We created a MATLAB computer code to measure the fractal dimension by box counting while "walking" along the shoreline. The range of box sizes is 0.7 to 450 km. The fractal dimension ranges from 1.0 to1.5 along the mainland shoreline of the Atlantic coast. The fractal dimension is compared with beach particle sizes (bedrock outcrop, cobbles, pebbles, sand, clay), tidal range, rate of sea level rise, rate and direction of vertical crustal movement, and wave energy, looking for correlation with the measured fractal dimensions. The results show a correlation between high fractal dimensions (1.3 - 1.4) and tectonically emergent coasts, and low fractal dimensions (1.0 - 1.2) along submergent and stable coastal regions. Fractal dimension averages 1.3 along shorelines with shoreline protection structures such as seawalls, jetties, and groins.

NOAA Coastal Mapping Shoreline Products

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The NOAA Coastal Mapping Shoreline Products from the Remote Sensing Division are primarily for application to the nautical charts produced by NOAA's Office of Coast...

Wetland shoreline recession in the Mississippi River Delta from petroleum oiling and cyclonic storms

Science.gov (United States)

Rangoonwala, Amina; Jones, Cathleen E.; Ramsey, Elijah W.

2016-01-01

We evaluate the relative impact of petroleum spill and storm surge on near-shore wetland loss by quantifying the lateral movement of coastal shores in upper Barataria Bay, Louisiana (USA), between June 2009 and October 2012, a study period that extends from the year prior to the Deepwater Horizon spill to 2.5 years following the spill. We document a distinctly different pattern of shoreline loss in the 2 years following the spill, both from that observed in the year prior to the spill, during which there was no major cyclonic storm, and from change related to Hurricane Isaac, which made landfall in August 2012. Shoreline erosion following oiling was far more spatially extensive and included loss in areas protected from wave-induced erosion. We conclude that petroleum exposure can substantially increase shoreline recession particularly in areas protected from storm-induced degradation and disproportionally alters small oil-exposed barrier islands relative to natural erosion.

The consequences of sequence erosion in the evolution of recombination hotspots.

Science.gov (United States)

Tiemann-Boege, Irene; Schwarz, Theresa; Striedner, Yasmin; Heissl, Angelika

2017-12-19

Meiosis is initiated by a double-strand break (DSB) introduced in the DNA by a highly controlled process that is repaired by recombination. In many organisms, recombination occurs at specific and narrow regions of the genome, known as recombination hotspots, which overlap with regions enriched for DSBs. In recent years, it has been demonstrated that conversions and mutations resulting from the repair of DSBs lead to a rapid sequence evolution at recombination hotspots eroding target sites for DSBs. We still do not fully understand the effect of this erosion in the recombination activity, but evidence has shown that the binding of trans -acting factors like PRDM9 is affected. PRDM9 is a meiosis-specific, multi-domain protein that recognizes DNA target motifs by its zinc finger domain and directs DSBs to these target sites. Here we discuss the changes in affinity of PRDM9 to eroded recognition sequences, and explain how these changes in affinity of PRDM9 can affect recombination, leading sometimes to sterility in the context of hybrid crosses. We also present experimental data showing that DNA methylation reduces PRDM9 binding in vitro Finally, we discuss PRDM9-independent hotspots, posing the question how these hotspots evolve and change with sequence erosion.This article is part of the themed issue 'Evolutionary causes and consequences of recombination rate variation in sexual organisms'. © 2017 The Authors.

Field guide for the protection and cleanup of oiled Arctic shorelines

International Nuclear Information System (INIS)

Owens, E.H.

1996-01-01

Practical suggestions for the protection, treatment and cleanup of oiled shorelines during summer and open-water conditions are described. This manual was developed as a field guide to be used during spill response operations for the rapid identification of shoreline response options. Special attention is given to techniques that are normally available and appropriate for shoreline types and coastal environmental setting that are typical of Arctic regions. The guide is divided into four main sections: (1) shoreline protection, (2) treatment strategy by shoreline type, (3) treatment or cleanup methods, and (4) response strategies for specific environments. The importance of the type and volume of oil spilled, and the environmental factors that should be taken into account in the event of a spill (time of year, weather, ice and wave conditions) are stressed. The presence of sensitive resources such as wildlife, fish stocks, plant communities and human-use activities are also considered. tabs., figs

Application of Low-Cost Fixed-Wing UAV for Inland Lakes Shoreline Investigation

Science.gov (United States)

Templin, Tomasz; Popielarczyk, Dariusz; Kosecki, Rafał

2017-10-01

One of the most important factors that influences the performance of geomorphologic parameters on urban lakes is the water level. It fluctuates periodically, causing shoreline changes. It is especially significant for typical environmental studies like bathymetric surveys, morphometric parameters calculation, sediment depth changes, thermal structure, water quality monitoring, etc. In most reservoirs, it can be obtained from digitized historical maps or plans or directly measured using the instruments such as: geodetic total station, GNSS receivers, UAV with different sensors, satellite and aerial photos, terrestrial and airborne light detection and ranging, or others. Today one of the most popular measuring platforms, increasingly applied in many applications is UAV. Unmanned aerial system can be a cheap, easy to use, on-demand technology for gathering remote sensing data. Our study presents a reliable methodology for shallow lake shoreline investigation with the use of a low-cost fixed-wing UAV system. The research was implemented on a small, eutrophic urban inland reservoir located in the northern part of Poland—Lake Suskie. The geodetic TS, and RTK/GNSS measurements, hydroacoustic soundings and experimental aerial mapping were conducted by the authors in 2012-2015. The article specifically describes the UAV system used for experimental measurements, the obtained results and the accuracy analysis. Final conclusions demonstrate that even a low-cost fixed-wing UAV can provide an excellent tool for accurately surveying a shallow lake shoreline and generate valuable geoinformation data collected definitely faster than when traditional geodetic methods are employed.

Hotspots of uncertainty in land-use and land-cover change projections: a global-scale model comparison.

Science.gov (United States)

Prestele, Reinhard; Alexander, Peter; Rounsevell, Mark D A; Arneth, Almut; Calvin, Katherine; Doelman, Jonathan; Eitelberg, David A; Engström, Kerstin; Fujimori, Shinichiro; Hasegawa, Tomoko; Havlik, Petr; Humpenöder, Florian; Jain, Atul K; Krisztin, Tamás; Kyle, Page; Meiyappan, Prasanth; Popp, Alexander; Sands, Ronald D; Schaldach, Rüdiger; Schüngel, Jan; Stehfest, Elke; Tabeau, Andrzej; Van Meijl, Hans; Van Vliet, Jasper; Verburg, Peter H

2016-12-01

Model-based global projections of future land-use and land-cover (LULC) change are frequently used in environmental assessments to study the impact of LULC change on environmental services and to provide decision support for policy. These projections are characterized by a high uncertainty in terms of quantity and allocation of projected changes, which can severely impact the results of environmental assessments. In this study, we identify hotspots of uncertainty, based on 43 simulations from 11 global-scale LULC change models representing a wide range of assumptions of future biophysical and socioeconomic conditions. We attribute components of uncertainty to input data, model structure, scenario storyline and a residual term, based on a regression analysis and analysis of variance. From this diverse set of models and scenarios, we find that the uncertainty varies, depending on the region and the LULC type under consideration. Hotspots of uncertainty appear mainly at the edges of globally important biomes (e.g., boreal and tropical forests). Our results indicate that an important source of uncertainty in forest and pasture areas originates from different input data applied in the models. Cropland, in contrast, is more consistent among the starting conditions, while variation in the projections gradually increases over time due to diverse scenario assumptions and different modeling approaches. Comparisons at the grid cell level indicate that disagreement is mainly related to LULC type definitions and the individual model allocation schemes. We conclude that improving the quality and consistency of observational data utilized in the modeling process and improving the allocation mechanisms of LULC change models remain important challenges. Current LULC representation in environmental assessments might miss the uncertainty arising from the diversity of LULC change modeling approaches, and many studies ignore the uncertainty in LULC projections in assessments of LULC

Quebec region's shoreline segmentation in the St. Lawrence River : response tool for oil spills

International Nuclear Information System (INIS)

Laforest, S.; Martin, V.

2004-01-01

Environment Canada, the Canadian Coast Guard, and the Eastern Canada Response Corporation are developing and refining pre-spill databases containing information about physical shoreline characteristics. Automated links between these pre-spill shoreline characteristic databases and computerized shoreline assessment tools have also been created using Geographical Information System (GIS) technology. The pre-spill databases can be used for planning shoreline cleanup operations. A training exercise, designed to evaluate a spill management system integrating the Quebec region pre-spill shoreline database and the ShoreAssess R shoreline assessment system was performed by Eastern Canada Response Corporation during an aerial survey where shoreline was segmented into digitized information. The cartography of segmentation covers the fluvial part of the St. Lawrence River. The oil spill-oriented database includes geomorphologic information from the supratidal to the lower intertidal zones. It also includes some statistical information and other requirements for cleanup operations. The computerized shoreline assessment tools made it possible to evaluate the length and type of shoreline that would potentially be impacted by oil. The tools also made it possible to assess the shoreline treatment methods most likely to be used, and evaluate the probable duration of the cleanup operation. The training exercise demonstrated that the integration of the databases is a valuable tool during the early phases of an oil spill response. 9 refs., 3 figs

Methodology and software to detect viral integration site hot-spots

Science.gov (United States)

2011-01-01

Background Modern gene therapy methods have limited control over where a therapeutic viral vector inserts into the host genome. Vector integration can activate local gene expression, which can cause cancer if the vector inserts near an oncogene. Viral integration hot-spots or 'common insertion sites' (CIS) are scrutinized to evaluate and predict patient safety. CIS are typically defined by a minimum density of insertions (such as 2-4 within a 30-100 kb region), which unfortunately depends on the total number of observed VIS. This is problematic for comparing hot-spot distributions across data sets and patients, where the VIS numbers may vary. Results We develop two new methods for defining hot-spots that are relatively independent of data set size. Both methods operate on distributions of VIS across consecutive 1 Mb 'bins' of the genome. The first method 'z-threshold' tallies the number of VIS per bin, converts these counts to z-scores, and applies a threshold to define high density bins. The second method 'BCP' applies a Bayesian change-point model to the z-scores to define hot-spots. The novel hot-spot methods are compared with a conventional CIS method using simulated data sets and data sets from five published human studies, including the X-linked ALD (adrenoleukodystrophy), CGD (chronic granulomatous disease) and SCID-X1 (X-linked severe combined immunodeficiency) trials. The BCP analysis of the human X-linked ALD data for two patients separately (774 and 1627 VIS) and combined (2401 VIS) resulted in 5-6 hot-spots covering 0.17-0.251% of the genome and containing 5.56-7.74% of the total VIS. In comparison, the CIS analysis resulted in 12-110 hot-spots covering 0.018-0.246% of the genome and containing 5.81-22.7% of the VIS, corresponding to a greater number of hot-spots as the data set size increased. Our hot-spot methods enable one to evaluate the extent of VIS clustering, and formally compare data sets in terms of hot-spot overlap. Finally, we show that the

The potential of shifting recombination hotspots to increase genetic gain in livestock breeding.

Science.gov (United States)

Gonen, Serap; Battagin, Mara; Johnston, Susan E; Gorjanc, Gregor; Hickey, John M

2017-07-04

on the distribution of QTN in the genome, the number of recombination hotspots and whether QTN were initially inside or outside recombination hotspots. Our findings show future scope for targeted modification of recombination hotspots e.g. through changes in zinc-finger motifs of the PRDM9 protein to increase genetic gain in production species.

Development of a practical methodology for integrating shoreline oil-holding capacity into modeling

International Nuclear Information System (INIS)

Schmidt Etkin, D.; French-McCay, D.; Rowe, J.; Michel, J.; Boufadel, M.; Li, H.

2008-01-01

The factors that influence the behaviour of oil in the aftermath of an oil spill on water include oil type and characteristics; oil thickness on the shoreline; time until shoreline impact; timing with regards to tides; weathering during and after the spill; and nearshore wave energy. The oil behaviour also depends on the shoreline characteristics, particularly porosity and permeability. The interactions of spilled oil with sediments on beaches must be well understood in order to model the oil spill trajectory, fate and risk. The movement of oil can be most accurately simulated if the algorithm incorporates an estimate of shoreline oil retention. This paper presented a literature review of relevant shoreline oiling studies and considered the relevance of study findings for inclusion in modelling. Survey data from a detailed shoreline cleanup assessment team (SCAT) were analyzed for patterns in oil penetration and oil-holding capacity by shoreline sediment type and oil type for potential use in modelling algorithms. A theoretical beach hydraulics model was then developed for use in a stochastic spill model. Gaps in information were identified, including the manner in which wave action and other environmental variables have an impact on the dynamic processes involved in shoreline oiling. The methodology presented in this paper can be used to estimate the amount of oil held by a shoreline upon impact to allow a trajectory model to more accurately project the total spread of oil. 27 refs., 13 tabs., 3 figs

Effects of oil on the rate and trajectory of Louisiana marsh shoreline erosion

International Nuclear Information System (INIS)

McClenachan, Giovanna; Eugene Turner, R; Tweel, Andrew W

2013-01-01

Oil can have long-term detrimental effects on marsh plant health, both above- and belowground. However, there are few data available that quantify the accelerated rate of erosion that oil may cause to marshes and the trajectory of change. Between November 2010 and August 2012, we collected data on shoreline erosion, soil strength, per cent cover of Spartina alterniflora, and marsh edge overhang at 30 closely spaced low oil and high oil sites in Bay Batiste, Louisiana. Surface oil samples were taken one meter into the marsh in February 2011. All high oiled sites in Bay Batiste were contaminated with Macondo 252 oil (oil from the Deepwater Horizon oil spill, 20 April–15 July 2010). The results suggest that there is a threshold where soil parameters change dramatically with a relatively small increase in oil concentration in the soil. Heavy oiling weakens the soil, creating a deeper undercut of the upper 50 cm of the marsh edge, and causing an accelerated rate of erosion that cascades along the shoreline. Our results demonstrate that it could take at least 2 yr to document the effects heavy oiling has had on the marsh shoreline. The presence of aboveground vegetation alone may not be an appropriate indicator of recovery. (letter)

Taksonomi i et hotspot

DEFF Research Database (Denmark)

Balslev, Henrik

2016-01-01

Op mod halvdelen af alle jordens plantearter findes koncentreret på kun 1,4 % af jordoverfladen. Langt de fleste af disse hotspots for biodiversitet befinder sig i de tropiske egne, hvor vores viden om antallet af arter er mangelfuld. Thailand er placeret i centrum af jordens største hotspot, som...

Measuring Historical Coastal Change using GIS and the Change Polygon Approach

Science.gov (United States)

Smith, M.J.; Cromley, R.G.

2012-01-01

This study compares two automated approaches, the transect-from-baseline technique and a new change polygon method, for quantifying historical coastal change over time. The study shows that the transect-from-baseline technique is complicated by choice of a proper baseline as well as generating transects that intersect with each other rather than with the nearest shoreline. The change polygon method captures the full spatial difference between the positions of the two shorelines and average coastal change is the defined as the ratio of the net area divided by the shoreline length. Although then change polygon method is sensitive to the definition and measurement of shoreline length, the results are more invariant to parameter changes than the transect-from-baseline method, suggesting that the change polygon technique may be a more robust coastal change method. ?? 2012 Blackwell Publishing Ltd.

Further ecological and shoreline stability reconnaissance surveys of Back Island, Behm Canal, Southeast Alaska

Energy Technology Data Exchange (ETDEWEB)

Young, J.S.; Strand, J.A.; Ecker, R.M.

1987-09-01

A diver reconnaissance of the intertidal and subtidal zones of Back Island was performed to catalog potentially vulnerable shellfish, other invertebrates, and marine plant resources occurring at three proposed alternate pier sites on the west side of Back Island. Additionally, a limited survey of terrestrial vegetation was conducted in the vicinity of one of the proposed alternate pier sites to describe the littoral community and to list the dominant plant species found there. Finally, a reconnaissance survey of the shoreline of Back Island was conducted to evaluate potential changes in shoreline stability resulting from construction of onshore portions of the Southeast Alaska Acoustic Measurement Facility (SEAFAC).

A METHOD OF EXTRACTING SHORELINE BASED ON SEMANTIC INFORMATION USING DUAL-LENGTH LiDAR DATA

Directory of Open Access Journals (Sweden)

C. Yao

2017-09-01

Full Text Available Shoreline is a spatial varying separation between water and land. By utilizing dual-wavelength LiDAR point data together with semantic information that shoreline often appears beyond water surface profile and is observable on the beach, the paper generates the shoreline and the details are as follows: (1 Gain the water surface profile: first we obtain water surface by roughly selecting water points based on several features of water body, then apply least square fitting method to get the whole water trend surface. Then we get the ground surface connecting the under -water surface by both TIN progressive filtering method and surface interpolation method. After that, we have two fitting surfaces intersected to get water surface profile of the island. (2 Gain the sandy beach: we grid all points and select the water surface profile grids points as seeds, then extract sandy beach points based on eight-neighborhood method and features, then we get all sandy beaches. (3 Get the island shoreline: first we get the sandy beach shoreline based on intensity information, then we get a threshold value to distinguish wet area and dry area, therefore we get the shoreline of several sandy beaches. In some extent, the shoreline has the same height values within a small area, by using all the sandy shoreline points to fit a plane P, and the intersection line of the ground surface and the shoreline plane P can be regarded as the island shoreline. By comparing with the surveying shoreline, the results show that the proposed method can successfully extract shoreline.

Microbial hotspots and hot moments in soil

Science.gov (United States)

Kuzyakov, Yakov; Blagodatskaya, Evgenia

2015-04-01

Soils are the most heterogeneous parts of the biosphere, with an extremely high differentiation of properties and processes within nano- to macroscales. The spatial and temporal heterogeneity of input of labile organics by plants creates microbial hotspots over short periods of time - the hot moments. We define microbial hotspots as small soil volumes with much faster process rates and much more intensive interactions compared to the average soil conditions. Such hotspots are found in the rhizosphere, detritusphere, biopores (including drilosphere) and on aggregate surfaces, but hotspots are frequently of mixed origin. Hot moments are short-term events or sequences of events inducing accelerated process rates as compared to the averaged rates. Thus, hotspots and hot moments are defined by dynamic characteristics, i.e. by process rates. For this hotspot concept we extensively reviewed and examined the localization and size of hotspots, spatial distribution and visualization approaches, transport of labile C to and from hotspots, lifetime and process intensities, with a special focus on process rates and microbial activities. The fraction of active microorganisms in hotspots is 2-20 times higher than in the bulk soil, and their specific activities (i.e. respiration, microbial growth, mineralization potential, enzyme activities, RNA/DNA ratio) may also be much higher. The duration of hot moments in the rhizosphere is limited and is controlled by the length of the input of labile organics. It can last a few hours up to a few days. In the detritusphere, however, the duration of hot moments is regulated by the output - by decomposition rates of litter - and lasts for weeks and months. Hot moments induce succession in microbial communities and intense intra- and interspecific competition affecting C use efficiency, microbial growth and turnover. The faster turnover and lower C use efficiency in hotspots counterbalances the high C inputs, leading to the absence of strong

Soil erosion and deposition in the new shorelines of the Three Gorges Reservoir.

Science.gov (United States)

Su, Xiaolei; Nilsson, Christer; Pilotto, Francesca; Liu, Songping; Shi, Shaohua; Zeng, Bo

2017-12-01

During the last few decades, the construction of storage reservoirs worldwide has led to the formation of many new shorelines in former upland areas. After the formation of such shorelines, a dynamic phase of soil erosion and deposition follows. We explored the factors regulating soil dynamics in the shorelines of the Three Gorges Reservoir (TGR) on the Yangtze River in China. We selected four study sites on the main stem and three on the tributaries in the upstream parts of the reservoir, and evaluated whether the sites close to the backwater tail (the point at which the river meets the reservoir) had more soil deposition than the sites far from the backwater tail. We also tested whether soil erosion differed between the main stem and the tributaries and across shorelines. We found that soil deposition in the new shorelines was higher close to the backwater tail and decreased downstream. Soil erosion was higher in the main stem than in the tributaries and higher at lower compared to higher shoreline altitudes. In the tributaries, erosion did not differ between higher and lower shoreline levels. Erosion increased with increasing fetch length, inundation duration and distance from the backwater tail, and decreased with increasing soil particle fineness. Our results provide a basis for identifying shorelines in need of restorative or protective measures. Copyright © 2017 Elsevier B.V. All rights reserved.

Comparative analysis of Dendrobium plastomes and utility of plastomic mutational hotspots.

Science.gov (United States)

Zhitao, Niu; Shuying, Zhu; Jiajia, Pan; Ludan, Li; Jing, Sun; Xiaoyu, Ding

2017-05-18

Dendrobium is one of the largest genera in Orchidaceae, comprising about 800-1500 species mainly distributed in tropical Asia, Australasia, and Australia. There are 74 species and two varieties of this genus in China. Because of their ornamental and commercial value, Dendrobium orchids have been studied at low taxonomic levels. However, structural changes and effective mutational hotspots of Dendrobium plastomes have rarely been documented. Here, 30 Dendrobium plastomes were compared, comprising 25 newly sequenced in this study and five previously published. Except for their differences in NDH genes, these plastomes shared identical gene content and order. Comparative analyses revealed that the variation in size of Dendroubium plastomes was associated with dramatically changed length of InDels. Furthermore, ten loci were identified as the top-ten mutational hotspots, whose sequence variability was almost unchanged with more than 10 plastomes sampled, suggesting that they may be powerful markers for Dendrobium species. In addition, primer pairs of 47 polymorphic microsatellites were developed. After assessing the mean BS values of all combinations derived from the top-ten hotspots, we recommend that the combination of five hotspots-trnT-trnL, rpl32-trnL, clpP-psbB, trnL intron, and rps16-trnQ-should be used in the phylogenetic and identification studies of Dendrobium.

Live hot, die young: transmission distortion in recombination hotspots.

Directory of Open Access Journals (Sweden)

Graham Coop

2007-03-01

Full Text Available There is strong evidence that hotspots of meiotic recombination in humans are transient features of the genome. For example, hotspot locations are not shared between human and chimpanzee. Biased gene conversion in favor of alleles that locally disrupt hotspots is a possible explanation of the short lifespan of hotspots. We investigate the implications of such a bias on human hotspots and their evolution. Our results demonstrate that gene conversion bias is a sufficiently strong force to produce the observed lack of sharing of intense hotspots between species, although sharing may be much more common for weaker hotspots. We investigate models of how hotspots arise, and find that only models in which hotspot alleles do not initially experience drive are consistent with observations of rather hot hotspots in the human genome. Mutations acting against drive cannot successfully introduce such hotspots into the population, even if there is direct selection for higher recombination rates, such as to ensure correct segregation during meiosis. We explore the impact of hotspot alleles on patterns of haplotype variation, and show that such alleles mask their presence in population genetic data, making them difficult to detect.

Transmission of infectious diseases en route to habitat hotspots.

Science.gov (United States)

Benavides, Julio; Walsh, Peter D; Meyers, Lauren Ancel; Raymond, Michel; Caillaud, Damien

2012-01-01

The spread of infectious diseases in wildlife populations is influenced by patterns of between-host contacts. Habitat "hotspots"--places attracting a large numbers of individuals or social groups--can significantly alter contact patterns and, hence, disease propagation. Research on the importance of habitat hotspots in wildlife epidemiology has primarily focused on how inter-individual contacts occurring at the hotspot itself increase disease transmission. However, in territorial animals, epidemiologically important contacts may primarily occur as animals cross through territories of conspecifics en route to habitat hotspots. So far, the phenomenon has received little attention. Here, we investigate the importance of these contacts in the case where infectious individuals keep visiting the hotspots and in the case where these individuals are not able to travel to the hotspot any more. We developed a simulation epidemiological model to investigate both cases in a scenario when transmission at the hotspot does not occur. We find that (i) hotspots still exacerbate epidemics, (ii) when infectious individuals do not travel to the hotspot, the most vulnerable individuals are those residing at intermediate distances from the hotspot rather than nearby, and (iii) the epidemiological vulnerability of a population is the highest when the number of hotspots is intermediate. By altering animal movements in their vicinity, habitat hotspots can thus strongly increase the spread of infectious diseases, even when disease transmission does not occur at the hotspot itself. Interestingly, when animals only visit the nearest hotspot, creating additional artificial hotspots, rather than reducing their number, may be an efficient disease control measure.

Response of Living Shorelines to Wave Energy and Sea Level rise: Short-term Resilience and Long-term Vulnerability in North Carolina

Science.gov (United States)

Currin, C.; Davis, J.

2017-12-01

A decade of research and monitoring of Living Shoreline sites in North Carolina identifies both resilient and vulnerable features of this approach to estuarine shoreline stabilization. We used a wave energy model to calculate representative wave energy along 1500 miles of estuarine shoreline, and observed a linear, negative relationship between wind-wave energy and the width of fringing salt marshes. Proximity to navigation channels (boat wakes) further reduced fringing marsh width. These results provide guidance for Living Shoreline design alternatives. Surface elevation tables (SETs) deployed at the lower edge of both natural fringing marshes and `Living Shoreline' marsh-sill sites demonstrated that while natural marshes were losing surface elevation at an average rate of 6 mm y-1, marsh surface elevation at Living Shoreline sites increased at an average of 3 mm y-1. Marsh vegetation at the lower edge of natural sites exhibited a decline in biomass, while Living Shoreline sites exhibited an increase in upper marsh species and an extension of lower marsh into previous mudflat habitat. These changes provide Living Shoreline (marsh-sill) sites with added resilience to sea level rise, though decreased inundation alters the delivery of other ecosystem services (fish habitat, nutrient cycling). North Carolina lagoonal estuaries have low suspended sediment supply and low topography, and modeling predicts that landward transgression is the primary means by which salt marsh acreage can be maintained under moderate to high sea level rise scenarios. In this region, bank erosion can be important source of sediment to wetland habitats. Further, the association of built infrastructure with Living Shoreline sites portends a future scenario of coastal squeeze, as marsh migration landward will be inhibited.

Timing of oceans on Mars from shoreline deformation

Science.gov (United States)

Citron, Robert I.; Manga, Michael; Hemingway, Douglas J.

2018-03-01

Widespread evidence points to the existence of an ancient Martian ocean. Most compelling are the putative ancient shorelines in the northern plains. However, these shorelines fail to follow an equipotential surface, and this has been used to challenge the notion that they formed via an early ocean and hence to question the existence of such an ocean. The shorelines’ deviation from a constant elevation can be explained by true polar wander occurring after the formation of Tharsis, a volcanic province that dominates the gravity and topography of Mars. However, surface loading from the oceans can drive polar wander only if Tharsis formed far from the equator, and most evidence indicates that Tharsis formed near the equator, meaning that there is no current explanation for the shorelines’ deviation from an equipotential that is consistent with our geophysical understanding of Mars. Here we show that variations in shoreline topography can be explained by deformation caused by the emplacement of Tharsis. We find that the shorelines must have formed before and during the emplacement of Tharsis, instead of afterwards, as previously assumed. Our results imply that oceans on Mars formed early, concurrent with the valley networks, and point to a close relationship between the evolution of oceans on Mars and the initiation and decline of Tharsis volcanism, with broad implications for the geology, hydrological cycle and climate of early Mars.

Numerical modeling of shoreline undulations part 1: Constant wave climate

DEFF Research Database (Denmark)

Kærgaard, Kasper Hauberg; Fredsøe, Jørgen

2013-01-01

integrated flow model, a wave-phase resolving sediment transport description and a one-line shoreline model.First the length of the shoreline undulations is determined in the linear regime using a stability analysis. Next the further evolution from the linear to the fully non-linear regime is described...

Sedimentation and erosion in Lake Diefenbaker, Canada: solutions for shoreline retreat monitoring.

Science.gov (United States)

Sadeghian, Amir; de Boer, Dirk; Lindenschmidt, Karl-Erich

2017-09-15

This study looks into sedimentation and erosion rates in Lake Diefenbaker, a prairie reservoir, in Saskatchewan, Canada, which has been in operation since 1968. First, we looked at the historical data in all different formats over the last 70 years, which includes data from more than 20 years before the formation of the lake. The field observations indicate high rates of shoreline erosion, especially in the upstream portion as a potential region for shoreline retreat. Because of the great importance of this waterbody to the province, monitoring sedimentation and erosion rates is necessary for maintaining the quality of water especially after severe floods which are more common due to climate change effects. Second, we used Google Maps Elevation API, a new tool from Google that provides elevation data for cross sections drawn between two points, by drawing 24 cross sections in the upstream area extending 250 m from each bank. This feature from Google can be used as an easy and fast monitoring tool, is free of charge, and provides excellent control capabilities for monitoring changes in cross-sectional profiles.

Shoreline dynamics of the active Yellow River delta since the implementation of Water-Sediment Regulation Scheme: A remote-sensing and statistics-based approach

Science.gov (United States)

Fan, Yaoshen; Chen, Shenliang; Zhao, Bo; Pan, Shunqi; Jiang, Chao; Ji, Hongyu

2018-01-01

The Active Yellow River (Huanghe) Delta (AYRD) is a complex landform in which rapid deposition takes place due to its geologic formation and evolution. Continuous monitoring of shoreline dynamics at high-temporal frequency is crucial for understanding the processes and the driving factors behind this rapidly changing coast. Great efforts have been devoted to map the changing shoreline of the Yellow River delta and explain such changes through remote sensing data. However, the temporal frequency of shoreline in the obtained datasets are generally not fine enough to reflect the detailed or subtly variable processes of shoreline retreat and advance. To overcome these limitations, we continuously monitored the dynamics of this shoreline using time series of Landsat data based on tidal-level calibration model and orthogonal-transect method. The Abrupt Change Value (ACV) results indicated that the retreat-advance patterns had a significant impact regardless of season or year. The Water-Sediment Regulation Scheme (WSRS) plays a dominant role in delivering river sediment discharge to the sea and has an impact on the annual average maximum ACV, especially at the mouth of the river. The positive relationship among the average ACV, runoff and sediment load are relatively obvious; however, we found that the Relative Exposure Index (REI) that measures wave energy was able to explain only approximately 20% of the variation in the data. Based on the abrupt change at the shoreline of the AYRD, river flow and time, we developed a binary regression model to calculate the critical sediment load and water discharge for maintaining the equilibrium of the active delta from 2002 to 2015. These values were approximately 0.48 × 108 t/yr and 144.37 × 108 m3/yr. If the current water and sediment proportions released from the Xiaolangdi Reservoir during the WSRS remain stable, the erosion-accretion patterns of the active delta will shift from rapid accretion to a dynamic balance.

Sand spit and shoreline dynamics near Terekhol river mouth, Goa, India

Digital Repository Service at National Institute of Oceanography (India)

Rajasekaran, C.; Jayakumar, S.; Gowthaman, R.; Jishad, M.; Yadhunath, E.M.; Pednekar, P.S.

Evolution of shoreline and sand spit at the mouth of the Terekhol River, near Keri beach, located in the Indian state of Goa has been investigated From the analysis of the data collected, the shoreline oscillation (accretion & erosion) is seasonal...

Living Shoreline Designs in Urban Systems: Examples from New York and Baltimore Harbors

Science.gov (United States)

Doss, T.

2017-12-01

In the aftermath of Hurricanes Irene and Sandy, there was a renewed interest in protecting our shorelines and restoring community resiliency by using natural and nature based features. We observed in the wake of these storms that those shorelines that had been protected by natural features sustained less damage. But how well can we mimic these natural features? And how do we determine which strategy is best along a given shoreline? A series of living shoreline pilot projects are presented, highlighting the design and construction for the different strategies and how they are being monitored and adapted to sea level rise.

Archaeological sites along the Gujarat coast: Proxies to decipher the past shoreline

Digital Repository Service at National Institute of Oceanography (India)

Vora, K.H.; Gaur, A; Sundaresh

on northwestern Saurashtra coast presents a classical case of shoreline shift in recent past. The paper discusses the archaeological evidences to decipher the past shoreline of the Saurashtra region...

Statistical power to detect change in a mangrove shoreline fish community adjacent to a nuclear power plant.

Science.gov (United States)

Dolan, T E; Lynch, P D; Karazsia, J L; Serafy, J E

2016-03-01

An expansion is underway of a nuclear power plant on the shoreline of Biscayne Bay, Florida, USA. While the precise effects of its construction and operation are unknown, impacts on surrounding marine habitats and biota are considered by experts to be likely. The objective of the present study was to determine the adequacy of an ongoing monitoring survey of fish communities associated with mangrove habitats directly adjacent to the power plant to detect fish community changes, should they occur, at three spatial scales. Using seasonally resolved data recorded during 532 fish surveys over an 8-year period, power analyses were performed for four mangrove fish metrics (fish diversity, fish density, and the occurrence of two ecologically important fish species: gray snapper (Lutjanus griseus) and goldspotted killifish (Floridichthys carpio). Results indicated that the monitoring program at current sampling intensity allows for detection of <33% changes in fish density and diversity metrics in both the wet and the dry season in the two larger study areas. Sampling effort was found to be insufficient in either season to detect changes at this level (<33%) in species-specific occurrence metrics for the two fish species examined. The option of supplementing ongoing, biological monitoring programs for improved, focused change detection deserves consideration from both ecological and cost-benefit perspectives.

All Hazard Hotspots/Population Density

Indian Academy of Sciences (India)

This map shows hotspots of humanitarian risk for floods, cyclones, and drought overlaying a population density gradient. Blue areas with striped overlay represent areas of high population density that are also risk hotspots. These are at higher risk of future population displacement as a result of climate hazards.

Ultraconfined Plasmonic Hotspots Inside Graphene Nanobubbles.

Science.gov (United States)

Fei, Z; Foley, J J; Gannett, W; Liu, M K; Dai, S; Ni, G X; Zettl, A; Fogler, M M; Wiederrecht, G P; Gray, S K; Basov, D N

2016-12-14

We report on a nanoinfrared (IR) imaging study of ultraconfined plasmonic hotspots inside graphene nanobubbles formed in graphene/hexagonal boron nitride (hBN) heterostructures. The volume of these plasmonic hotspots is more than one-million-times smaller than what could be achieved by free-space IR photons, and their real-space distributions are controlled by the sizes and shapes of the nanobubbles. Theoretical analysis indicates that the observed plasmonic hotspots are formed due to a significant increase of the local plasmon wavelength in the nanobubble regions. Such an increase is attributed to the high sensitivity of graphene plasmons to its dielectric environment. Our work presents a novel scheme for plasmonic hotspot formation and sheds light on future applications of graphene nanobubbles for plasmon-enhanced IR spectroscopy.

Hotspots in trauma memories and their relationship to successful trauma-focused psychotherapy: a pilot study.

Science.gov (United States)

Nijdam, Mirjam J; Baas, Melanie A M; Olff, Miranda; Gersons, Berthold P R

2013-02-01

Imaginal exposure is an essential element of trauma-focused psychotherapies for posttraumatic stress disorder (PTSD). Exposure should in particular focus on the "hotspots," the parts of trauma memories that cause high levels of emotional distress which are often reexperienced. Our aim was to investigate whether differences in the focus on hotspots differentiate between successful and unsuccessful trauma-focused psychotherapies. As part of a randomized trial, 45 PTSD patients completed brief eclectic psychotherapy for PTSD. We retrospectively assessed audio recordings of therapy sessions of 20 patients. Frequency of hotspots and the associated emotions, cognitions, and characteristics were compared for the most successful (n = 10) versus the least successful (n = 10) treatments. The mean number of unique hotspots per patient was 3.20, and this number did not differ between successful and unsuccessful treatments. In successful treatments, however, hotspots were more frequently addressed (r = .48), and they were accompanied by more characteristics of hotspots (r = .39), such as an audible change in affect, indicating medium- to large-sized effects. Repeatedly focusing on hotspots and looking for associated characteristics of hotspots may help clinicians to enhance the efficacy of imaginal exposure for patients who would otherwise show insufficient response to treatment. Copyright © 2013 International Society for Traumatic Stress Studies.

Targeted conservation to safeguard a biodiversity hotspot from climate and land-cover change.

Science.gov (United States)

Struebig, Matthew J; Wilting, Andreas; Gaveau, David L A; Meijaard, Erik; Smith, Robert J; Fischer, Manuela; Metcalfe, Kristian; Kramer-Schadt, Stephanie

2015-02-02

Responses of biodiversity to changes in both land cover and climate are recognized [1] but still poorly understood [2]. This poses significant challenges for spatial planning as species could shift, contract, expand, or maintain their range inside or outside protected areas [2-4]. We examine this problem in Borneo, a global biodiversity hotspot [5], using spatial prioritization analyses that maximize species conservation under multiple environmental-change forecasts. Climate projections indicate that 11%-36% of Bornean mammal species will lose ≥ 30% of their habitat by 2080, and suitable ecological conditions will shift upslope for 23%-46%. Deforestation exacerbates this process, increasing the proportion of species facing comparable habitat loss to 30%-49%, a 2-fold increase on historical trends. Accommodating these distributional changes will require conserving land outside existing protected areas, but this may be less than anticipated from models incorporating deforestation alone because some species will colonize high-elevation reserves. Our results demonstrate the increasing importance of upland reserves and that relatively small additions (16,000-28,000 km(2)) to the current conservation estate could provide substantial benefits to biodiversity facing changes to land cover and climate. On Borneo, much of this land is under forestry jurisdiction, warranting targeted conservation partnerships to safeguard biodiversity in an era of global change. Copyright © 2015 Elsevier Ltd. All rights reserved.

The GULLS project: a comparison of vulnerabilities across selected ocean hotspots and implications for adaptation to global change.

Science.gov (United States)

Cochrane, K.; Hobday, A. J.; Aswani, S.; Byfield, V.; Dutra, L.; Gasalla, M.; Haward, M.; Paytan, A.; Pecl, G.; Plaganyi-Lloyd, E.; Popova, K.; Salim, S. S.; Savage, C.; Sauer, W.; van Putten, I. E.; Visser, N.; Team, T G

2016-12-01

The GULLS project, `Global learning for local solutions: Reducing vulnerability of marine-dependent coastal communities' has been underway since October 2014. The project has been investigating six regional `hotspots': marine areas experiencing rapid warming. These are south-east Australia, Brazil, India, Solomon Islands, South Africa, and the Mozambique Channel and Madagascar. Rapid warming could be expected to have social, cultural and economic impacts that could affect these countries in different ways and may already be doing so. GULLS has focused on contributing to assessing and reducing the vulnerability of coastal communities and other stakeholders dependent on marine resources and to facilitate adaptation to climate change and variability through an integrated and trans-disciplinary approach. It includes participants from Australia, Brazil, India, Madagascar, New Zealand, South Africa, the United Kingdom and the United States of America. The research programme has been divided into six inter-linked components: ocean models, biological and ecological sensitivity analyses, system models, social vulnerability, policy mapping, and communication and education. This presentation will provide a brief overview of each of these components and describe the benefits that have resulted from the collaborative and transdisciplinary approach of GULLS. Following the standard vulnerability elements of exposure, sensitivity and adaptive capacity, the vulnerabilities of coastal communities and other stakeholders dependent on marine resources in the five hotspots will be compared using a set of indicators derived and populated from results of the research programme. The implications of similarities and differences between the hotspots for adaptation planning and options will be described.

Identifying species threat hotspots from global supply chains.

Science.gov (United States)

Moran, Daniel; Kanemoto, Keiichiro

2017-01-04

Identifying hotspots of species threat has been a successful approach for setting conservation priorities. One important challenge in conservation is that, in many hotspots, export industries continue to drive overexploitation. Conservation measures must consider not just the point of impact, but also the consumer demand that ultimately drives resource use. To understand which species threat hotspots are driven by which consumers, we have developed a new approach to link a set of biodiversity footprint accounts to the hotspots of threatened species on the IUCN Red List of Threatened Species. The result is a map connecting consumption to spatially explicit hotspots driven by production on a global scale. Locating biodiversity threat hotspots driven by consumption of goods and services can help to connect conservationists, consumers, companies and governments in order to better target conservation actions.

Microbial micropatches within microbial hotspots

Science.gov (United States)

Smith, Renee J.; Tobe, Shanan S.; Paterson, James S.; Seymour, Justin R.; Oliver, Rod L.; Mitchell, James G.

2018-01-01

The spatial distributions of organism abundance and diversity are often heterogeneous. This includes the sub-centimetre distributions of microbes, which have ‘hotspots’ of high abundance, and ‘coldspots’ of low abundance. Previously we showed that 300 μl abundance hotspots, coldspots and background regions were distinct at all taxonomic levels. Here we build on these results by showing taxonomic micropatches within these 300 μl microscale hotspots, coldspots and background regions at the 1 μl scale. This heterogeneity among 1 μl subsamples was driven by heightened abundance of specific genera. The micropatches were most pronounced within hotspots. Micropatches were dominated by Pseudomonas, Bacteroides, Parasporobacterium and Lachnospiraceae incertae sedis, with Pseudomonas and Bacteroides being responsible for a shift in the most dominant genera in individual hotspot subsamples, representing up to 80.6% and 47.3% average abundance, respectively. The presence of these micropatches implies the ability these groups have to create, establish themselves in, or exploit heterogeneous microenvironments. These genera are often particle-associated, from which we infer that these micropatches are evidence for sub-millimetre aggregates and the aquatic polymer matrix. These findings support the emerging paradigm that the microscale distributions of planktonic microbes are numerically and taxonomically heterogeneous at scales of millimetres and less. We show that microscale microbial hotspots have internal structure within which specific local nutrient exchanges and cellular interactions might occur. PMID:29787564

Aquifer Sampling Tube Completion Report: 100 Area and Hanford Townsite Shorelines

International Nuclear Information System (INIS)

Peterson, R.E.; Borghese, J.V.; Erb, D.B.

1998-02-01

Groundwater contamination is known or suspected along the Hanford Site shoreline of the Columbia River adjacent to the retired reactor areas. Along the shoreline away from the reactor areas, where contamination is presumed to be absent, monitoring sites are frequently widely spaced or unavailable to confirm the presumption. Previous characterizations of contamination near the river have relied on data from a limited number of near-river wells, contaminant plume migration predictions, and river bank seepage sampling to anticipate shoreline conditions. In recent years, new methods have been developed to obtain groundwater samples from the aquifer near the groundwater/river water interface. These methods include using (1) divers to obtain samples of pore water from riverbed sediment and (2) sampling tubes that are driven into the aquifer at the shoreline. The latter method also permits sampling the aquifer at multiple depths, which helps to determine the thickness of the potentially contaminated groundwater layer that discharges into the river

Research on bioremediation of oil polluted shorelines in Norway

International Nuclear Information System (INIS)

Sveum, P.

1995-01-01

Marine bioremediation research in Norway has been directed towards the use of fertilizers on arctic shorelines and ice infested waters. In addition from the focus on fertilizers, the research has paid considerable attention to nutrient dynamics, and the influence of microfauna such as bacterial and fungal grazers on the dynamics of macronutrients. The interactions between microbial and physical processes on the shorelines, between photochemical processes and nutrient dynamics, have also been addressed. 29 refs., 5 figs., 2 tabs

Distribution of enzyme activity hotspots induced by earthworms in top- and subsoil

Science.gov (United States)

Hoang, D. T. T.

2016-12-01

Earthworms (Lumbricus terrestris L.) not only affect soil physics, but they also boost microbial activities and consequently create important hotspots of microbial mediated carbon and nutrient turnover through their burrowing activity. However, it is still unknown to which extend earthworms change the enzyme distribution and activity inside their burrows in top- and subsoil horizons. We hypothesized that earthworm burrows, which are enriched in available substrates, have higher percentage of enzyme activity hotspots than soil without earthworms, and that enzyme activities decreased with increasing depth because of the increasing recalcitrance of organic matter in subsoil. We visualized enzyme distribution inside and outside of worm burrows (biopores) by in situ soil zymography and measured enzyme kinetics of 6 enzymes - β-glucosidase (GLU), cellobiohydrolase (CBH), xylanase (XYL), chitinase (NAG), leucine aminopeptidase (LAP) and acid phosphatase (APT) - in pore and bulk soil material up to 105 cm. Zymography showed a heterogeneous distribution of hotspots in worm burrows. The hotspot areas was 2.4 to 14 times larger in the burrows than in soil without earthworms. However, the dispersion index of hotspot distribution showed more aggregated hotspots in soil without earthworms than in soil with earthworms and burrow wall. Enzyme activities decreased with depth, by a factor of 2 to 8 due to fresh C input from the soil surface. Compared to bulk soil, enzyme activities in topsoil biopores were up to 11 times higher for all enzymes, but in the subsoil activities of XYL, NAG and APT were lower in earthworm biopores than bulk soil. In conclusion, hotspots were twice as concentrated close to earthworm burrows as in surrounding soil. Earthworms exerted stronger effects on enzyme activities in biopores in the topsoil than in subsoil. Keywords: Earthworms, hotspots, enzyme activities, enzyme distribution, subsoil

Capturing Hotspots For Constrained Indoor Movement

DEFF Research Database (Denmark)

Ahmed, Tanvir; Pedersen, Torben Bach; Lu, Hua

2013-01-01

Finding the hotspots in large indoor spaces is very important for getting overloaded locations, security, crowd management, indoor navigation and guidance. The tracking data coming from indoor tracking are huge in volume and not readily available for finding hotspots. This paper presents a graph......-based model for constrained indoor movement that can map the tracking records into mapping records which represent the entry and exit times of an object in a particular location. Then it discusses the hotspots extraction technique from the mapping records....

Use of synthetic aperture radar for recognition of Coastal Geomorphological Features, land-use assessment and shoreline changes in Bragança coast, Pará, Northern Brazil

Directory of Open Access Journals (Sweden)

Souza-Filho Pedro W. M.

2003-01-01

Full Text Available Synthetic Aperture Radar (SAR images are being used more extensively than ever before for geoscience applications in the moist tropics. In this investigation, a RADARSAT1-1 C-HH SAR image acquired in 1998 was used for coastal mapping and land-cover assessment in the Bragança area, in the northern Brazil. The airborne GEMS 1000 X-HH radar image acquired in 1972 during the RADAM Project was also used for evaluating coastal changes occurring over the last three decades. The research has confirmed the usefulness of RADARSAT-1 image for geomorphological mapping and land-cover assessment, particularly in macrotidal mangrove coasts. It was possible to map mangroves, salt marshes, chenier sand ridges, dunes, barrier-beach ridges, shallow water morphologies and different forms of land-use. Furthermore, a new method to estimate shoreline changes based on the superimposition of vectors extracted from both sources of SAR data has indicated that the shoreline has been subjected to severe coastal erosion responsible for retreat of 32 km² and accretion of 20 km², resulting in a mangrove land loss of almost 12 km². In an application perspective, orbital and airborne SAR data proved to be a fundamental source of information for both geomorphological mapping and monitoring coastal changes in moist tropical environments.

Meiotic recombination hotspots - a comparative view.

Science.gov (United States)

Choi, Kyuha; Henderson, Ian R

2015-07-01

During meiosis homologous chromosomes pair and undergo reciprocal genetic exchange, termed crossover. Meiotic recombination has a profound effect on patterns of genetic variation and is an important tool during crop breeding. Crossovers initiate from programmed DNA double-stranded breaks that are processed to form single-stranded DNA, which can invade a homologous chromosome. Strand invasion events mature into double Holliday junctions that can be resolved as crossovers. Extensive variation in the frequency of meiotic recombination occurs along chromosomes and is typically focused in narrow hotspots, observed both at the level of DNA breaks and final crossovers. We review methodologies to profile hotspots at different steps of the meiotic recombination pathway that have been used in different eukaryote species. We then discuss what these studies have revealed concerning specification of hotspot locations and activity and the contributions of both genetic and epigenetic factors. Understanding hotspots is important for interpreting patterns of genetic variation in populations and how eukaryotic genomes evolve. In addition, manipulation of hotspots will allow us to accelerate crop breeding, where meiotic recombination distributions can be limiting. © 2015 The Authors The Plant Journal © 2015 John Wiley & Sons Ltd.

Distribution of recombination hotspots in the human genome--a comparison of computer simulations with real data.

Directory of Open Access Journals (Sweden)

Dorota Mackiewicz

Full Text Available Recombination is the main cause of genetic diversity. Thus, errors in this process can lead to chromosomal abnormalities. Recombination events are confined to narrow chromosome regions called hotspots in which characteristic DNA motifs are found. Genomic analyses have shown that both recombination hotspots and DNA motifs are distributed unevenly along human chromosomes and are much more frequent in the subtelomeric regions of chromosomes than in their central parts. Clusters of motifs roughly follow the distribution of recombination hotspots whereas single motifs show a negative correlation with the hotspot distribution. To model the phenomena related to recombination, we carried out computer Monte Carlo simulations of genome evolution. Computer simulations generated uneven distribution of hotspots with their domination in the subtelomeric regions of chromosomes. They also revealed that purifying selection eliminating defective alleles is strong enough to cause such hotspot distribution. After sufficiently long time of simulations, the structure of chromosomes reached a dynamic equilibrium, in which number and global distribution of both hotspots and defective alleles remained statistically unchanged, while their precise positions were shifted. This resembles the dynamic structure of human and chimpanzee genomes, where hotspots change their exact locations but the global distributions of recombination events are very similar.

Automated Selection of Hotspots (ASH): enhanced automated segmentation and adaptive step finding for Ki67 hotspot detection in adrenal cortical cancer.

Science.gov (United States)

Lu, Hao; Papathomas, Thomas G; van Zessen, David; Palli, Ivo; de Krijger, Ronald R; van der Spek, Peter J; Dinjens, Winand N M; Stubbs, Andrew P

2014-11-25

In prognosis and therapeutics of adrenal cortical carcinoma (ACC), the selection of the most active areas in proliferative rate (hotspots) within a slide and objective quantification of immunohistochemical Ki67 Labelling Index (LI) are of critical importance. In addition to intratumoral heterogeneity in proliferative rate i.e. levels of Ki67 expression within a given ACC, lack of uniformity and reproducibility in the method of quantification of Ki67 LI may confound an accurate assessment of Ki67 LI. We have implemented an open source toolset, Automated Selection of Hotspots (ASH), for automated hotspot detection and quantification of Ki67 LI. ASH utilizes NanoZoomer Digital Pathology Image (NDPI) splitter to convert the specific NDPI format digital slide scanned from the Hamamatsu instrument into a conventional tiff or jpeg format image for automated segmentation and adaptive step finding hotspots detection algorithm. Quantitative hotspot ranking is provided by the functionality from the open source application ImmunoRatio as part of the ASH protocol. The output is a ranked set of hotspots with concomitant quantitative values based on whole slide ranking. We have implemented an open source automated detection quantitative ranking of hotspots to support histopathologists in selecting the 'hottest' hotspot areas in adrenocortical carcinoma. To provide wider community easy access to ASH we implemented a Galaxy virtual machine (VM) of ASH which is available from http://bioinformatics.erasmusmc.nl/wiki/Automated_Selection_of_Hotspots . The virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/13000_2014_216.

Radiological aspects in hot-spot removal from spare LPRM location

International Nuclear Information System (INIS)

Nagarajan, V.; Raveendran, P.S.; Parashar, Vivek; Mharse, R.S.; Phadnis, P.S.

2012-01-01

TAPS 1 and 2 comprises of twin units of boiling water reactors with vertical core. Cruciform shaped control blades are driven from the bottom through the core using hydraulic Control Rod Drives (CRD). Neutron flux monitoring is carried out by in-core devices such as Source Range Monitors (SRM) and Intermediate Range Monitors (IRM) during the start up and later using Power Range Monitors located in the biological shield. In addition, Local Power Range Monitor (LPRM) assemblies located symmetrically in the core gives information about axial and radial neutron flux. There are 18 LPRM locations out of which 13 are used for mounting the LPRMs and rest are spare locations. The lower head of the reactor vessel has 120 nozzles for CRD housings, SRM, IRM, LPRMs, vessel drain etc. Maintenance work on CRDs, removal and installation of in-core monitoring devices etc are carried out from under vessel area in the primary containment known as CRD housing area. While conducting radiation survey of CRD housing area after shut down of unit no. 1 for the 21st refueling outage, hotspot was observed at spare LPRM 40-21 location showing radiation level of 10 Gy/h and general back ground of 30-50 mGy/h. An attempt is made to bring out the ALARA efforts taken during hot spot removal. Options like hotspot shielding were not feasible. After core unloading, efforts were made to remove the hotspot. To assess the change in radiation levels, a high range silicon semiconductor based gamma monitor's detector was mounted on a pole and fixed near hotspot. Radiation level at the detector was 6 Gy/h. In addition detector of another low range area monitor was fixed at the trolley in the CRD housing area and radiation level was 7 mGy/h. Monitors of both the detectors were kept outside the primary containment in low back ground area at reactor building 103' El. Hotspot removal was attempted initially by vacuuming from the top of reactor vessel using 1 inch dia tube from spare LPRM location. Vacuum

Αutomated 2D shoreline detection from coastal video imagery: an example from the island of Crete

Science.gov (United States)

Velegrakis, A. F.; Trygonis, V.; Vousdoukas, M. I.; Ghionis, G.; Chatzipavlis, A.; Andreadis, O.; Psarros, F.; Hasiotis, Th.

2015-06-01

Beaches are both sensitive and critical coastal system components as they: (i) are vulnerable to coastal erosion (due to e.g. wave regime changes and the short- and long-term sea level rise) and (ii) form valuable ecosystems and economic resources. In order to identify/understand the current and future beach morphodynamics, effective monitoring of the beach spatial characteristics (e.g. the shoreline position) at adequate spatio-temporal resolutions is required. In this contribution we present the results of a new, fully-automated detection method of the (2-D) shoreline positions using high resolution video imaging from a Greek island beach (Ammoudara, Crete). A fully-automated feature detection method was developed/used to monitor the shoreline position in geo-rectified coastal imagery obtained through a video system set to collect 10 min videos every daylight hour with a sampling rate of 5 Hz, from which snapshot, time-averaged (TIMEX) and variance images (SIGMA) were generated. The developed coastal feature detector is based on a very fast algorithm using a localised kernel that progressively grows along the SIGMA or TIMEX digital image, following the maximum backscatter intensity along the feature of interest; the detector results were found to compare very well with those obtained from a semi-automated `manual' shoreline detection procedure. The automated procedure was tested on video imagery obtained from the eastern part of Ammoudara beach in two 5-day periods, a low wave energy period (6-10 April 2014) and a high wave energy period (1 -5 November 2014). The results showed that, during the high wave energy event, there have been much higher levels of shoreline variance which, however, appeared to be similarly unevenly distributed along the shoreline as that related to the low wave energy event, Shoreline variance `hot spots' were found to be related to the presence/architecture of an offshore submerged shallow beachrock reef, found at a distance of 50-80 m

Effects of erosion control structures along a portion of the northern Chesapeake Bay shoreline

Science.gov (United States)

Zabawa, C.F.; Kerhin, R.T.; Bayley, S.

1981-01-01

A 6.500-meter reach of western Chesapeake Bay shoreline (lower Mayo Peninsula) lost about 1.1??106 cubic meters of sediment (equivalent to 170 cubic meters lost per meter of shoreline) between 1846 and 1932, when the first aerial photographs show the shoreline already substantially protected by a system of groins and intermittent bulkheading. These structures have eliminated the fastland as a source of erodable material, and have starved the supply of sand for littoral drift, thus limiting the extent of the beaches to the remaining groin fields. Volumes of sediment involved in these impacts are small in the overall sediment budget. Bulkheads produce no deficit in the budget since scouring of the beaches on their seaward sides makes up for the decreased erosion of protected fastland. Groins trap little of the potential littoral drift (computed to be about 104 cubic meters per meter of shoreline per year). The sand supply in the remaining beaches is nearly equivalent to the annual loss of sediment from the entire shoreline system due to the long-term rate of erosion of the shoreline and nearshore between 1846 and 1932. ?? 1981 Springer-Verlag New York Inc.

The red queen model of recombination hotspots evolution in the light of archaic and modern human genomes.

Science.gov (United States)

Lesecque, Yann; Glémin, Sylvain; Lartillot, Nicolas; Mouchiroud, Dominique; Duret, Laurent

2014-11-01

Recombination is an essential process in eukaryotes, which increases diversity by disrupting genetic linkage between loci and ensures the proper segregation of chromosomes during meiosis. In the human genome, recombination events are clustered in hotspots, whose location is determined by the PRDM9 protein. There is evidence that the location of hotspots evolves rapidly, as a consequence of changes in PRDM9 DNA-binding domain. However, the reasons for these changes and the rate at which they occur are not known. In this study, we investigated the evolution of human hotspot loci and of PRDM9 target motifs, both in modern and archaic human lineages (Denisovan) to quantify the dynamic of hotspot turnover during the recent period of human evolution. We show that present-day human hotspots are young: they have been active only during the last 10% of the time since the divergence from chimpanzee, starting to be operating shortly before the split between Denisovans and modern humans. Surprisingly, however, our analyses indicate that Denisovan recombination hotspots did not overlap with modern human ones, despite sharing similar PRDM9 target motifs. We further show that high-affinity PRDM9 target motifs are subject to a strong self-destructive drive, known as biased gene conversion (BGC), which should lead to the loss of the majority of them in the next 3 MYR. This depletion of PRDM9 genomic targets is expected to decrease fitness, and thereby to favor new PRDM9 alleles binding different motifs. Our refined estimates of the age and life expectancy of human hotspots provide empirical evidence in support of the Red Queen hypothesis of recombination hotspots evolution.

The red queen model of recombination hotspots evolution in the light of archaic and modern human genomes.

Directory of Open Access Journals (Sweden)

Yann Lesecque

2014-11-01

Full Text Available Recombination is an essential process in eukaryotes, which increases diversity by disrupting genetic linkage between loci and ensures the proper segregation of chromosomes during meiosis. In the human genome, recombination events are clustered in hotspots, whose location is determined by the PRDM9 protein. There is evidence that the location of hotspots evolves rapidly, as a consequence of changes in PRDM9 DNA-binding domain. However, the reasons for these changes and the rate at which they occur are not known. In this study, we investigated the evolution of human hotspot loci and of PRDM9 target motifs, both in modern and archaic human lineages (Denisovan to quantify the dynamic of hotspot turnover during the recent period of human evolution. We show that present-day human hotspots are young: they have been active only during the last 10% of the time since the divergence from chimpanzee, starting to be operating shortly before the split between Denisovans and modern humans. Surprisingly, however, our analyses indicate that Denisovan recombination hotspots did not overlap with modern human ones, despite sharing similar PRDM9 target motifs. We further show that high-affinity PRDM9 target motifs are subject to a strong self-destructive drive, known as biased gene conversion (BGC, which should lead to the loss of the majority of them in the next 3 MYR. This depletion of PRDM9 genomic targets is expected to decrease fitness, and thereby to favor new PRDM9 alleles binding different motifs. Our refined estimates of the age and life expectancy of human hotspots provide empirical evidence in support of the Red Queen hypothesis of recombination hotspots evolution.

Spatiotemporal shoreline dynamics of Namibian coastal lagoons derived by a dense remote sensing time series approach

Science.gov (United States)

Behling, Robert; Milewski, Robert; Chabrillat, Sabine

2018-06-01

This paper proposes the remote sensing time series approach WLMO (Water-Land MOnitor) to monitor spatiotemporal shoreline changes. The approach uses a hierarchical classification system based on temporal MNDWI-trajectories with the goal to accommodate typical uncertainties in remote sensing shoreline extraction techniques such as existence of clouds and geometric mismatches between images. Applied to a dense Landsat time series between 1984 and 2014 for the two Namibian coastal lagoons at Walvis Bay and Sandwich Harbour the WLMO was able to identify detailed accretion and erosion progressions at the sand spits forming these lagoons. For both lagoons a northward expansion of the sand spits of up to 1000 m was identified, which corresponds well with the prevailing northwards directed ocean current and wind processes that are responsible for the material transport along the shore. At Walvis Bay we could also show that in the 30 years of analysis the sand spit's width has decreased by more than a half from 750 m in 1984-360 m in 2014. This ongoing cross-shore erosion process is a severe risk for future sand spit breaching, which would expose parts of the lagoon and the city to the open ocean. One of the major advantages of WLMO is the opportunity to analyze detailed spatiotemporal shoreline changes. Thus, it could be shown that the observed long-term accretion and erosion processes underwent great variations over time and cannot a priori be assumed as linear processes. Such detailed spatiotemporal process patterns are a prerequisite to improve the understanding of the processes forming the Namibian shorelines. Moreover, the approach has also the potential to be used in other coastal areas, because the focus on MNDWI-trajectories allows the transfer to many multispectral satellite sensors (e.g. Sentinel-2, ASTER) available worldwide.

Optimal index related to the shoreline dynamics during a storm: the case of Jesolo beach

Science.gov (United States)

Archetti, Renata; Paci, Agnese; Carniel, Sandro; Bonaldo, Davide

2016-05-01

The paper presents an application of shoreline monitoring aimed at understanding the response of a beach to single storms and at identifying its typical behaviour, in order to be able to predict shoreline changes and to properly plan the defence of the shore zone. On the study area, in Jesolo beach (northern Adriatic Sea, Italy), a video monitoring station and an acoustic wave and current profiler were installed in spring 2013, recording, respectively, images and hydrodynamic data. The site lacks previous detailed hydrodynamic and morphodynamic data. Variations in the shoreline were quantified in combination with available near-shore wave conditions, making it possible to analyse the relationship between the shoreline displacement and the wave features. Results denote characteristic patterns of beach response to storm events, and highlight the importance of improving beach protection in this zone, notwithstanding the many interventions experimented in the last decades. A total of 31 independent storm events were selected during the period October 2013-October 2014, and for each of them synthetic indexes based on storm duration, energy and maximum wave height were developed and estimated. It was found that the net shoreline displacements during a storm are well correlated with the total wave energy associated to the considered storm by an empirical power law equation. A sub-selection of storms in the presence of an artificial dune protecting the beach (in the winter season) was examined in detail, allowing to conclude that the adoption of this coastal defence strategy in the study area can reduce shoreline retreat during a storm. This type of intervention can sometimes contribute to prolonging overall stability not only in the replenished zone but also in downdrift areas. The implemented methodology, which confirms to be economically attractive if compared to more traditional monitoring systems, proves to be a valuable system to monitor beach erosive processes and

Pre-spill shoreline mapping in Prince William Sound, Alaska

International Nuclear Information System (INIS)

Owens, E.H.; Lamarche, A.; Reimer, P.D.; Marchant, S.O.; O'Brien, D.K.

2003-01-01

A long-term shoreline mapping program has been initiated in Prince William Sound, Alaska, to generate pre-spill data to assist in the planning activities for oil spill response in the area. Low-altitude aerial videotape surveys and video images form the basis for the mapping effort. The coast was initially divided into alongshore segments. The physical shore-zone is relatively homogeneous within each segment. A pre-spill Shoreline Cleanup Assessment Team (SCAT) database, using the ShoreData software, was created based on this initial detailed mapping. The SCAT field teams are therefore equipped with a detailed analysis of the shore-zone character. The same information was also used to develop a separate database for use by planning and response operations groups. The data is entered into the Graphical Resource Database (GRD), and a Geographic Information System (GIS). A simplified characterization of the primary features of each segment is then made available through interpretation of the data. In the event of an oil spill, the SCAT data in the ShoreData files can be combined with field data on shoreline oiling conditions using a second software package called ShoreAccess R which provides summaries of the main parameters required by the planning group. It can also be used as a data storage and management tool. As part of this program, more than 1700 kilometres of shoreline in Prince William Sound have already been mapped. 24 refs., 4 tabs., 5 figs

An integrated approach to shoreline mapping for spill response planning

International Nuclear Information System (INIS)

Owens, E.H.; LeBlanc, S.R.; Percy, R.J.

1996-01-01

A desktop mapping package was introduced which has the capability to provide consistent and standardized application of mapping and data collection/generation techniques. Its application in oil spill cleanup was discussed. The data base can be updated easily as new information becomes available. This provides a response team with access to a wide range of information that would otherwise be difficult to obtain. Standard terms and definitions and shoreline segmentation procedures are part of the system to describe the shore-zone character and shore-zone oiling conditions. The program that is in place for Atlantic Canada involves the integration of (1) Environment Canada's SCAT methodology in pre-spill data generation, (2) shoreline segmentation, (3) response management by objectives, (4) Environment Canada's national sensitivity mapping program, and (5) Environment Canada's field guide for the protection and treatment of oiled shorelines. 7 refs., 6 figs

Imbalance aware lithography hotspot detection: a deep learning approach

Science.gov (United States)

Yang, Haoyu; Luo, Luyang; Su, Jing; Lin, Chenxi; Yu, Bei

2017-07-01

With the advancement of very large scale integrated circuits (VLSI) technology nodes, lithographic hotspots become a serious problem that affects manufacture yield. Lithography hotspot detection at the post-OPC stage is imperative to check potential circuit failures when transferring designed patterns onto silicon wafers. Although conventional lithography hotspot detection methods, such as machine learning, have gained satisfactory performance, with the extreme scaling of transistor feature size and layout patterns growing in complexity, conventional methodologies may suffer from performance degradation. For example, manual or ad hoc feature extraction in a machine learning framework may lose important information when predicting potential errors in ultra-large-scale integrated circuit masks. We present a deep convolutional neural network (CNN) that targets representative feature learning in lithography hotspot detection. We carefully analyze the impact and effectiveness of different CNN hyperparameters, through which a hotspot-detection-oriented neural network model is established. Because hotspot patterns are always in the minority in VLSI mask design, the training dataset is highly imbalanced. In this situation, a neural network is no longer reliable, because a trained model with high classification accuracy may still suffer from a high number of false negative results (missing hotspots), which is fatal in hotspot detection problems. To address the imbalance problem, we further apply hotspot upsampling and random-mirror flipping before training the network. Experimental results show that our proposed neural network model achieves comparable or better performance on the ICCAD 2012 contest benchmark compared to state-of-the-art hotspot detectors based on deep or representative machine leaning.

Modelling Hotspots for Invasive Alien Plants in India.

Science.gov (United States)

Adhikari, Dibyendu; Tiwary, Raghuvar; Barik, Saroj Kanta

2015-01-01

Identification of invasion hotspots that support multiple invasive alien species (IAS) is a pre-requisite for control and management of invasion. However, till recently it remained a methodological challenge to precisely determine such invasive hotspots. We identified the hotspots of alien species invasion in India through Ecological Niche Modelling (ENM) using species occurrence data from the Global Biodiversity Information Facility (GBIF). The predicted area of invasion for selected species were classified into 4 categories based on number of model agreements for a region i.e. high, medium, low and very low. About 49% of the total geographical area of India was predicted to be prone to invasion at moderate to high levels of climatic suitability. The intersection of anthropogenic biomes and ecoregions with the regions of 'high' climatic suitability was classified as hotspot of alien plant invasion. Nineteen of 47 ecoregions of India, harboured such hotspots. Most ecologically sensitive regions of India, including the 'biodiversity hotspots' and coastal regions coincide with invasion hotspots, indicating their vulnerability to alien plant invasion. Besides demonstrating the usefulness of ENM and open source data for IAS management, the present study provides a knowledge base for guiding the formulation of an effective policy and management strategy for controlling the invasive alien species.

NIMS Observation of Hotspots on Io

Science.gov (United States)

1996-01-01

Io has been imaged by the Near Infrared Mapping Spectrometer (NIMS) on Galileo. The image on the right shows for the first time the distribution of volcanic hotspots on the surface of Io, as seen by NIMS. Three of these hotspots are new discoveries, only detectable with the NIMS instrument. This image was taken during the G1 encounter on June 29 1996. The image on the left shows the same view of Io as seen by the Voyager spacecraft in 1979. At least one dozen hotspots have been identified from this NIMS image. Most of the hotspot locations can be matched with volcanic features on the surface of Io, including the vent area of the active Prometheus plume.The Jet Propulsion Laboratory, Pasadena, CA manages the mission for NASA's Office of Space Science, Washington, DC.This image and other images and data received from Galileo are posted on the World Wide Web, on the Galileo mission home page at URL http://galileo.jpl.nasa.gov.

Threatened Plants in China’s Sanjiang Plain: Hotspot Distributions and Gap Analysis

Directory of Open Access Journals (Sweden)

Baojia Du

2018-01-01

Full Text Available Global biodiversity is markedly decreasing in response to climate change and human disturbance. Sanjiang Plain is recognized as a biodiversity hotspot in China due to its high forest and wetland coverage, but species are being lost at an unprecedented rate, induced by anthropogenic activities. Identifying hotspot distributions and conservation gaps of threatened species is of particular significance for enhancing the conservation of biodiversity. Specifically, we integrated the principles and methods of spatial hotspot inspection, geographic information system (GIS technology and spatial autocorrelation analysis along with fieldwork to determine the spatial distribution patterns and unprotected hotspots of vulnerable and endangered plants in Sanjiang Plain. A gap analysis of the conservation status of vulnerable and endangered plants was conducted. Our results indicate that six nationally-protected plants were not observed in nature reserves or were without any protection, while the protection rates were <10% for 10 other nationally-protected plants. Protected areas (PAs cover <5% of the distribution areas for 31 threatened plant species, while only five species are covered by national nature reserves (NNRs within >50% of the distribution areas. We found 30 hotspots with vulnerable and endangered plants in the study area, but the area covered by NNRs is very limited. Most of the hotspots were located in areas with a high-high aggregation of plant species. Therefore, it is necessary to expand the area of existing nature reserves, establish miniature protection plots and create new PAs and ecological corridors to link the existing PAs. Our findings can contribute to the design of a PA network for botanical conservation.

Back-island and open-ocean shorelines, and sand areas of Assateague Island, Maryland and Virginia, April 12, 1989, to September 5, 2013

Science.gov (United States)

Guy, Kristy K.

2015-01-01

Assessing the physical change to shorelines and wetlands is critical in determining the resiliency of wetland systems that protect adjacent habitat and communities. The wetland and back-barrier shorelines of Assateague Island, located in Maryland and Virginia, changed as a result of wave action and storm surge that occurred during Hurricane Sandy in 2012. As part of the U.S. Geological Survey Coastal and Marine Geology Program, the impact of Hurricane Sandy will be assessed and placed in its historical context to understand the future vulnerability of wetland systems. Making these assessments will rely on data extracted from current and historical resources such as maps, aerial photographs, satellite imagery, and lidar elevation data, which document physical changes over time.

Detection of Oil near Shorelines during the Deepwater Horizon Oil Spill Using Synthetic Aperture Radar (SAR

Directory of Open Access Journals (Sweden)

Oscar Garcia-Pineda

2017-06-01

Full Text Available During any marine oil spill, floating oil slicks that reach shorelines threaten a wide array of coastal habitats. To assess the presence of oil near shorelines during the Deepwater Horizon (DWH oil spill, we scanned the library of Synthetic Aperture Radar (SAR imagery collected during the event to determine which images intersected shorelines and appeared to contain oil. In total, 715 SAR images taken during the DWH spill were analyzed and processed, with 188 of the images clearly showing oil. Of these, 156 SAR images showed oil within 10 km of the shoreline with appropriate weather conditions for the detection of oil on SAR data. We found detectable oil in SAR images within 10 km of the shoreline from west Louisiana to west Florida, including near beaches, marshes, and islands. The high number of SAR images collected in Barataria Bay, Louisiana in 2010 allowed for the creation of a nearshore oiling persistence map. This analysis shows that, in some areas inside Barataria Bay, floating oil was detected on as many as 29 different days in 2010. The nearshore areas with persistent floating oil corresponded well with areas where ground survey crews discovered heavy shoreline oiling. We conclude that satellite-based SAR imagery can detect oil slicks near shorelines, even in sheltered areas. These data can help assess potential shoreline oil exposure without requiring boats or aircraft. This method can be particularly helpful when shoreline assessment crews are hampered by difficult access or, in the case of DWH, a particularly large spatial and temporal spill extent.

An Evaluation of the Fixed Hotspot Hypothesis for the Pacific Plate

Science.gov (United States)

Wessel, P.; Kroenke, L. W.

2008-12-01

Using geometry and ages from 12 Pacific seamount chains, we recently constructed two new Pacific absolute plate motion models that extend our self-consistent and high-resolution models back to 145 Ma. The WK08-A model maps the full uncertainty in the age progressions into uncertainties in rotation opening angles, yielding a relatively smooth plate motion model. The WK08-G model relaxes the mapping of age uncertainties in order to better isolate secondary geometry changes seen along many co-registered chains. Both models have been used to assess the viability of the fixed hotspot hypothesis in the Pacific. In constructing these models, we found that only a small group of age samples had to be discarded on the grounds that they were discordant with the dominant trends. We were able to connect plate motions for pre- and post-Emperor age intervals by including the Ratak-Gilbert-Ellice, Liliuokalani and Musicians trails in our analysis. However, as no active hotspot locations exist for the older chains their inclusion adds additional model parameters. Both age and geometry misfits increase with age, reflecting the observed increase in age uncertainties and the broader and less distinct nature of the older trails. Paleomagnetic observations from the Emperor seamount chain have been interpreted to suggest that these seamounts must have formed at latitudes significantly more northerly than the present location of the Hawaii hotspot, implying a drifting mantle plume. At the same time, new estimates of the age of the Hawaii- Emperor bend places bend formation at a time of global plate reorganization. We will present a complete analysis of inter-chain distances between coeval radiometric samples from Pacific chains and compare these distances to the inter-hotspot distances at the present time. Significant departures from the current hotspot separations would be direct and unequivocal evidence of motion between the Pacific hotspot reference frame and the spin axis and as such

Distribution of Recombination Hotspots in the Human Genome – A Comparison of Computer Simulations with Real Data

Science.gov (United States)

Mackiewicz, Dorota; de Oliveira, Paulo Murilo Castro; Moss de Oliveira, Suzana; Cebrat, Stanisław

2013-01-01

Recombination is the main cause of genetic diversity. Thus, errors in this process can lead to chromosomal abnormalities. Recombination events are confined to narrow chromosome regions called hotspots in which characteristic DNA motifs are found. Genomic analyses have shown that both recombination hotspots and DNA motifs are distributed unevenly along human chromosomes and are much more frequent in the subtelomeric regions of chromosomes than in their central parts. Clusters of motifs roughly follow the distribution of recombination hotspots whereas single motifs show a negative correlation with the hotspot distribution. To model the phenomena related to recombination, we carried out computer Monte Carlo simulations of genome evolution. Computer simulations generated uneven distribution of hotspots with their domination in the subtelomeric regions of chromosomes. They also revealed that purifying selection eliminating defective alleles is strong enough to cause such hotspot distribution. After sufficiently long time of simulations, the structure of chromosomes reached a dynamic equilibrium, in which number and global distribution of both hotspots and defective alleles remained statistically unchanged, while their precise positions were shifted. This resembles the dynamic structure of human and chimpanzee genomes, where hotspots change their exact locations but the global distributions of recombination events are very similar. PMID:23776462

Growth and decline of shoreline industry in Sydney estuary (Australia) and influence on adjacent estuarine sediments.

Science.gov (United States)

Birch, G F; Lean, J; Gunns, T

2015-06-01

Sydney estuary (Australia), like many urbanised waterways, is degraded due to an extended history of anthropogenic activity. Two major sources of contamination to this estuary are discharge by former shoreline industries and historic and contemporary catchment stormwater. The objectives of the present study were to document changes in shoreline land use from European settlement to the present day and determine the influence of this trend on the metal content of adjacent estuarine sediments. Temporal analysis of land use for seven time horizons between 1788 and 2010 showed rapid expansion of industry along much of the Sydney estuary foreshore soon after European settlement due to the benefits of easy and inexpensive access and readily available water for cooling and power. Shoreline industry attained maximum development in 1978 (32-km length) and declined rapidly to the present-day (9-km length) through redevelopment of industrial sites into medium- to high-density, high-value residential housing. Cores taken adjacent to 11 long-term industrial sites showed that past industrial practices contributed significantly to contamination of estuarine sediment. Subsurface metal concentrations were up to 35 times that of present-day surface sediment and over 100 times greater than natural background concentrations. Sedimentation rates for areas adjacent to shoreline industry were between 0.6 and 2.5 cm/year, and relaxation times were estimated at 50 to 100 years. Natural relaxation and non-disturbance of sediments may be the best management practice in most locations.

Vegetation of natural and artificial shorelines in Upper Klamath Basin’s fringe wetlands

Science.gov (United States)

Ray, Andrew M.; Irvine, Kathryn M.; Hamilton, Andy S.

2013-01-01

The Upper Klamath Basin (UKB) in northern California and southern Oregon supports large hypereutrophic lakes surrounded by natural and artificial shorelines. Lake shorelines contain fringe wetlands that provide key ecological services to the people of this region. These wetlands also provide a context for drawing inferences about how differing wetland types and wave exposure contribute to the vegetative assemblages in lake-fringe wetlands. Here, we summarize how elevation profiles and vegetation richness vary as a function of wave exposure and wetland type. Our results show that levee wetland shorelines are 4X steeper and support fewer species than other wetland types. We also summarize the occurrence probability of the five common wetland plant species that represent the overwhelming majority of the diversity of these wetlands. In brief, the occurrence probability of the culturally significant Nuphar lutea spp. polysepala and the invasive Phalaris arundinacea in wave exposed and sheltered sites varies based on wetland type. The occurrence probability for P. arundinacea was greatest in exposed portions of deltaic shorelines, but these trends were reversed on levees where the occurrence probability was greater in sheltered sites. The widespread Schoenoplectus acutus var. acutus occurred throughout all wetland and exposure type combinations but had a higher probability of occurrence in wave exposed sites. Results from this work will add to our current understanding of how wetland shoreline profiles interact with wave exposure to influence the occurrence probability of the dominant vegetative species in UKB’s shoreline wetlands.

Using GPS-surveyed intertidal zones to determine the validity of shorelines automatically mapped by Landsat water indices

Science.gov (United States)

Kelly, Joshua T.; Gontz, Allen M.

2018-03-01

Satellite remote sensing has been used extensively in a variety of shoreline studies and validated using aerial photography. This ground truth method only represents an instantaneous depiction of the shoreline at the time of acquisition and does not take into account the spatial and temporal variability of the dynamic shoreline boundary. Landsat 8‧s Operational Land Imager sensor's capability to accurately delineate a shoreline is assessed by comparing all known Landsat water index-derived shorelines with two GPS-surveyed intertidal zones that coincide with the satellite flyover date, one of which had near-neap tide conditions. Seven indices developed for automatically classifying water pixels were evaluated for their ability to delineate shorelines. The shoreline is described here as the area above and below maximum low and high tide, otherwise known as the intertidal zone. The high-water line, or wet/dry sediment line, was chosen as the shoreline indicator to be mapped using a handheld GPS. The proportion of the Landsat-derived shorelines that fell within this zone and their alongshore profile lengths were calculated. The most frequently used water index and the predecessor to Modified Normalized Difference Water Index (MNDWI), Normalized Difference Water Index (NDWI), was found to be the least accurate by a significant margin. Other indices required calibration of their threshold value to achieve accurate results, thus diminishing their replicability success for other regions. MNDWI was determined to be the best index for automated shoreline mapping, based on its superior accuracy and repeatable, stable threshold value.

Evolutionary hotspots in the Mojave Desert

Science.gov (United States)

Vandergast, Amy G.; Inman, Richard D.; Barr, Kelly R.; Nussear, Kenneth E.; Esque, Todd C.; Hathaway, Stacie A.; Wood, Dustin A.; Medica, Philip A.; Breinholt, Jesse W.; Stephen, Catherine L.; Gottscho, Andrew D.; Marks, Sharyn B.; Jennings, W. Bryan; Fisher, Robert N.

2013-01-01

Genetic diversity within species provides the raw material for adaptation and evolution. Just as regions of high species diversity are conservation targets, identifying regions containing high genetic diversity and divergence within and among populations may be important to protect future evolutionary potential. When multiple co-distributed species show spatial overlap in high genetic diversity and divergence, these regions can be considered evolutionary hotspots. We mapped spatial population genetic structure for 17 animal species across the Mojave Desert, USA. We analyzed these in concurrence and located 10 regions of high genetic diversity, divergence or both among species. These were mainly concentrated along the western and southern boundaries where ecotones between mountain, grassland and desert habitat are prevalent, and along the Colorado River. We evaluated the extent to which these hotspots overlapped protected lands and utility-scale renewable energy development projects of the Bureau of Land Management. While 30–40% of the total hotspot area was categorized as protected, between 3–7% overlapped with proposed renewable energy project footprints, and up to 17% overlapped with project footprints combined with transmission corridors. Overlap of evolutionary hotspots with renewable energy development mainly occurred in 6 of the 10 identified hotspots. Resulting GIS-based maps can be incorporated into ongoing landscape planning efforts and highlight specific regions where further investigation of impacts to population persistence and genetic connectivity may be warranted.

Linking Backbarrier Lacustrine Stratigraphy with Spatial Dynamics of Shoreline Retreat in a Rapidly Subsiding Region of the Mississippi River Delta

Science.gov (United States)

Dietz, M.; Liu, K. B.; Bianchette, T. A.; Yao, Q.

2017-12-01

The shoreline along the northern Gulf of Mexico is rapidly retreating as coastal features of abandoned Mississippi River delta complexes erode and subside. Bay Champagne is located in the Caminada-Moreau headland, a region of shoreline west of the currently active delta that has one of the highest rates of retreat and land loss. As a result, this site has transitioned from a stable, circular inland lake several kilometers from the shore to a frequently perturbed, semi-circular backbarrier lagoon, making it ideal to study the environmental effects of progressive land loss. Analyses of clastic layers in a series of sediment cores collected at this site over the past decade indicate the lake was less perturbed in the past and has become increasingly more sensitive to marine incursion events caused by tropical cyclones. Geochemical and pollen analyses of these cores also reveal profound changes in environmental and chemical conditions in Bay Champagne over the past century as the shoreline has retreated. Through relating stratigraphy to spatial changes observed from satellite imagery, this study attempts to identify the tipping point at which Bay Champagne began the transition from an inland lake to a backbarrier environment, and to determine the rate at which this transition occurred. Results will be used to develop a model of the environmental transition experienced by a rapidly retreating coastline and to predict how other regions of the Mississippi River deltaic system could respond to future shoreline retreat.

Hotspot temperature calculation and quench analysis on ITER busbar

International Nuclear Information System (INIS)

Rong, J.; Huang, X.Y.; Song, Y.T.; Wu, S.T.

2014-01-01

Highlights: • The hotspot temperature is calculated in the case of different extra copper in this paper. • The MQE (minimum quench energy) is carried out as the external heating to trigger a quench in busbar. • The temperature changes after quench is analyzed by Gandalf code in the case of different extra copper and no helium. • The normal length is carried out in the case of different extra copper by Gandalf code. - Abstract: This paper describes the analysis of ITER feeder busbar, the hotspot temperature of busbar is calculated by classical method in the case of 0%, 50%, 75% and 100% extra copper (copper strands). The quench behavior of busbar is simulated by 1-D Gandalf code, and the MQE (minimum quench energy) is estimated in classical method as initial external heat in Gandalf input file. The temperature and the normal length of conductor are analyzed in the case of 0%, 50% and 100% extra copper and no helium. By hotspot temperature, conductor temperature and normal length are contrasted in different extra copper cases, it is shown that the extra copper play an important role in quench protecting

Comparing Fuzzy Sets and Random Sets to Model the Uncertainty of Fuzzy Shorelines

NARCIS (Netherlands)

Dewi, Ratna Sari; Bijker, Wietske; Stein, Alfred

2017-01-01

This paper addresses uncertainty modelling of shorelines by comparing fuzzy sets and random sets. Both methods quantify extensional uncertainty of shorelines extracted from remote sensing images. Two datasets were tested: pan-sharpened Pleiades with four bands (Pleiades) and pan-sharpened Pleiades

Bayesian inference of shared recombination hotspots between humans and chimpanzees.

Science.gov (United States)

Wang, Ying; Rannala, Bruce

2014-12-01

Recombination generates variation and facilitates evolution. Recombination (or lack thereof) also contributes to human genetic disease. Methods for mapping genes influencing complex genetic diseases via association rely on linkage disequilibrium (LD) in human populations, which is influenced by rates of recombination across the genome. Comparative population genomic analyses of recombination using related primate species can identify factors influencing rates of recombination in humans. Such studies can indicate how variable hotspots for recombination may be both among individuals (or populations) and over evolutionary timescales. Previous studies have suggested that locations of recombination hotspots are not conserved between humans and chimpanzees. We made use of the data sets from recent resequencing projects and applied a Bayesian method for identifying hotspots and estimating recombination rates. We also reanalyzed SNP data sets for regions with known hotspots in humans using samples from the human and chimpanzee. The Bayes factors (BF) of shared recombination hotspots between human and chimpanzee across regions were obtained. Based on the analysis of the aligned regions of human chromosome 21, locations where the two species show evidence of shared recombination hotspots (with high BFs) were identified. Interestingly, previous comparative studies of human and chimpanzee that focused on the known human recombination hotspots within the β-globin and HLA regions did not find overlapping of hotspots. Our results show high BFs of shared hotspots at locations within both regions, and the estimated locations of shared hotspots overlap with the locations of human recombination hotspots obtained from sperm-typing studies. Copyright © 2014 by the Genetics Society of America.

Back-Island and Open-Ocean Shorelines, and Sand Areas of the Undeveloped Areas of New Jersey Barrier Islands, March 9, 1991, to July 30, 2013

Science.gov (United States)

Guy, Kristy K.

2015-11-09

Assessing the physical change to shorelines and wetlands is critical for determining the resiliency of wetland systems that protect adjacent habitat and communities. The wetland and back-barrier shorelines of the New Jersey barrier islands were changed by wave action and storm surge from Hurricane Sandy in 2012. The U.S. Geological Survey Coastal and Marine Geology Program is assessing the impact of Hurricane Sandy to understand its historical context and the vulnerability of wetland systems. These assessments require data that document physical changes over time, such as maps, aerial photographs, satellite imagery, and lidar elevation data.

DNA Sequence-Mediated, Evolutionarily Rapid Redistribution of Meiotic Recombination Hotspots

Science.gov (United States)

Wahls, Wayne P.; Davidson, Mari K.

2011-01-01

Hotspots regulate the position and frequency of Spo11 (Rec12)-initiated meiotic recombination, but paradoxically they are suicidal and are somehow resurrected elsewhere in the genome. After the DNA sequence-dependent activation of hotspots was discovered in fission yeast, nearly two decades elapsed before the key realizations that (A) DNA site-dependent regulation is broadly conserved and (B) individual eukaryotes have multiple different DNA sequence motifs that activate hotspots. From our perspective, such findings provide a conceptually straightforward solution to the hotspot paradox and can explain other, seemingly complex features of meiotic recombination. We describe how a small number of single-base-pair substitutions can generate hotspots de novo and dramatically alter their distribution in the genome. This model also shows how equilibrium rate kinetics could maintain the presence of hotspots over evolutionary timescales, without strong selective pressures invoked previously, and explains why hotspots localize preferentially to intergenic regions and introns. The model is robust enough to account for all hotspots of humans and chimpanzees repositioned since their divergence from the latest common ancestor. PMID:22084420

Epigenetic functions enriched in transcription factors binding to mouse recombination hotspots.

Science.gov (United States)

Wu, Min; Kwoh, Chee-Keong; Przytycka, Teresa M; Li, Jing; Zheng, Jie

2012-06-21

The regulatory mechanism of recombination is a fundamental problem in genomics, with wide applications in genome-wide association studies, birth-defect diseases, molecular evolution, cancer research, etc. In mammalian genomes, recombination events cluster into short genomic regions called "recombination hotspots". Recently, a 13-mer motif enriched in hotspots is identified as a candidate cis-regulatory element of human recombination hotspots; moreover, a zinc finger protein, PRDM9, binds to this motif and is associated with variation of recombination phenotype in human and mouse genomes, thus is a trans-acting regulator of recombination hotspots. However, this pair of cis and trans-regulators covers only a fraction of hotspots, thus other regulators of recombination hotspots remain to be discovered. In this paper, we propose an approach to predicting additional trans-regulators from DNA-binding proteins by comparing their enrichment of binding sites in hotspots. Applying this approach on newly mapped mouse hotspots genome-wide, we confirmed that PRDM9 is a major trans-regulator of hotspots. In addition, a list of top candidate trans-regulators of mouse hotspots is reported. Using GO analysis we observed that the top genes are enriched with function of histone modification, highlighting the epigenetic regulatory mechanisms of recombination hotspots.

Multiwavelength study of Cygnus A. V. The hotspots in the lobe

Science.gov (United States)

Pyrzas, S.; Steenbrugge, K. C.; Blundell, K. M.

2015-02-01

Context. The jets in Faranoff-Riley type II AGN are supposed come to an abrupt halt in hotspots on opposite sides of the nucleus. Quite commonly, two hotspots are observed in each lobe. The origin of the second hotspot is currently poorly understood. Aims: Our aims are to determine the origin of the secondary hotspot in the western lobe of Cygnus A from high resolution multifrequency radio images; to determine the minimum Lorentz factor of the electrons in the hotspots, often referred to as the low-energy turnover; and to study the magnetic field configuration of the hotspots. Methods: We used 151 MHz Merlin and 327 MHz, 1.4, 5, 8, 15, and 43 GHz VLA images to determine the centroid of the peak luminosity, the spectral shape, and polarization fraction of both hotspots in the western lobe of Cygnus A. Results: We find a spatial shift in peak luminosity between the lower and higher frequency images for both hotspots. We determine the minimum Lorentz factor of the electrons to be ~1000, and show that most of the emission from the primary hotspot is linearly polarized. The minimum energy magnetic field strength is found to range between ~0.14 and ~0.5 mG in both the primary and secondary hotspots. Conclusions: From the low polarization and the determined outflow velocity, we conclude that the secondary hotspot is no longer a strong shock, and is an expanding, and hence a fading hotspot. This hotspot has an age that is of the same order of magnitude as the jet precession period.

Impact of an offshore wind farm on wave conditions and shoreline development

DEFF Research Database (Denmark)

Christensen, Erik Damgaard; Kristensen, Sten Esbjørn; Deigaard, Rolf

2014-01-01

the shoreline’s sensitivity to the distance from the OWF to the shoreline was studied. The effect of the reduced wind speed inside and on the lee side of the offshore wind farm was incorporated in a parameterized way in a spectral wind wave model. The shoreline impact was studied with a one-line model....

PRDM9 drives evolutionary erosion of hotspots in Mus musculus through haplotype-specific initiation of meiotic recombination.

Science.gov (United States)

Baker, Christopher L; Kajita, Shimpei; Walker, Michael; Saxl, Ruth L; Raghupathy, Narayanan; Choi, Kwangbom; Petkov, Petko M; Paigen, Kenneth

2015-01-01

Meiotic recombination generates new genetic variation and assures the proper segregation of chromosomes in gametes. PRDM9, a zinc finger protein with histone methyltransferase activity, initiates meiotic recombination by binding DNA at recombination hotspots and directing the position of DNA double-strand breaks (DSB). The DSB repair mechanism suggests that hotspots should eventually self-destruct, yet genome-wide recombination levels remain constant, a conundrum known as the hotspot paradox. To test if PRDM9 drives this evolutionary erosion, we measured activity of the Prdm9Cst allele in two Mus musculus subspecies, M.m. castaneus, in which Prdm9Cst arose, and M.m. domesticus, into which Prdm9Cst was introduced experimentally. Comparing these two strains, we find that haplotype differences at hotspots lead to qualitative and quantitative changes in PRDM9 binding and activity. Using Mus spretus as an outlier, we found most variants affecting PRDM9Cst binding arose and were fixed in M.m. castaneus, suppressing hotspot activity. Furthermore, M.m. castaneus×M.m. domesticus F1 hybrids exhibit novel hotspots, with large haplotype biases in both PRDM9 binding and chromatin modification. These novel hotspots represent sites of historic evolutionary erosion that become activated in hybrids due to crosstalk between one parent's Prdm9 allele and the opposite parent's chromosome. Together these data support a model where haplotype-specific PRDM9 binding directs biased gene conversion at hotspots, ultimately leading to hotspot erosion.

Putting 'Local' Back into Public Wifi Hotspots

DEFF Research Database (Denmark)

Korn, Matthias; Klokmose, Clemens Nylandsted

2012-01-01

Public Wifi hotspots in cafes and public places are based on wireless local area network technology (WLAN). In contrast to the common understanding of connecting directly to the internet when connecting to a Wifi hotspot, we are proposing to bring the original notion of connecting to a local...... hotspot in cafes, bars, community centers, and other (semi-)public places in order to facilitate co-located activities for such varied purposes as fostering local community, civic participation, sociality in general, and entertainment. We propose a network locality that builds on local infrastructure...

What makes labour and birth traumatic? A survey of intrapartum 'hotspots'.

Science.gov (United States)

Harris, Rachel; Ayers, Susan

2012-01-01

Evidence suggests between 1% and 6% of women develop post-traumatic stress disorder (PTSD) after childbirth. 'Hotspots' are moments of extreme distress during traumatising events that are implicated in symptoms of PTSD. This cross-sectional internet survey of hotspots examined (1) the content of intrapartum hotspots and (2) whether particular events, cognitions or emotions during hotspots are related to PTSD. Women (N = 675) who experienced a difficult or traumatic birth completed a questionnaire composed of a validated measure of PTSD, questions concerning the existence of hotspots, and a newly developed measure of emotions and cognitions during hotspots. The majority of women (67.4%) reported at least one hotspot during birth and 52.9% had re-experiencing symptoms of these hotspots. Women were more likely to have PTSD if hotspots involved fear and lack of control (odds ratio (OR) 1.30, 95% CI 1.17-1.43) or intrapartum dissociation (OR 1.12, 95% CI 1.05-1.19). Risk of PTSD was higher if hotspots concerned interpersonal difficulties (OR 4.34, 95% CI 2.15-8.77) or obstetric complications (OR 3.35, 95% CI 1.64-6.87) compared to complications with the baby.

A joint modelling exercise designed to assess the respective impact of emission changes and meteorological variability on the observed air quality trends in major urban hotspots.

Science.gov (United States)

Colette, Augustin; Bessagnet, Bertrand; Dangiola, Ariela; D'Isidoro, Massimo; Gauss, Michael; Granier, Claire; Hodnebrog, Øivind; Jakobs, Hermann; Kanakidou, Maria; Khokhar, Fahim; Law, Kathy; Maurizi, Alberto; Meleux, Frederik; Memmesheimer, Michael; Nyiri, Agnes; Rouil, Laurence; Stordal, Frode; Tampieri, Francesco

2010-05-01

With the growth of urban agglomerations, assessing the drivers of variability of air quality in and around the main anthropogenic emission hotspots has become a major societal concern as well as a scientific challenge. These drivers include emission changes and meteorological variability; both of them can be investigated by means of numerical modelling of trends over the past few years. A collaborative effort has been developed in the framework of the CityZen European project to address this question. Several chemistry and transport models (CTMs) are deployed in this activity: four regional models (BOLCHEM, CHIMERE, EMEP and EURAD) and three global models (CTM2, MOZART, and TM4). The period from 1998 to 2007 has been selected for the historic reconstruction. The focus for the present preliminary presentation is Europe. A consistent set of emissions is used by all partners (EMEP for the European domain and IPCC-AR5 beyond) while a variety of meteorological forcing is used to gain robustness in the ensemble spread amongst models. The results of this experiment will be investigated to address the following questions: - Is the envelope of models able to reproduce the observed trends of the key chemical constituents? - How the variability amongst models changes in time and space and what does it tell us about the processes driving the observed trends? - Did chemical regimes and aerosol formation processes changed in selected hotspots? Answering the above questions will contribute to fulfil the ultimate goal of the present study: distinguishing the respective contribution of meteorological variability and emissions changes on air quality trends in major anthropogenic emissions hotspots.

The national assessment of shoreline change: a GIS compilation of vector cliff edges and associated cliff erosion data for the California coast

Science.gov (United States)

Hapke, Cheryl; Reid, David; Borrelli, Mark

2007-01-01

The U.S. Geological Survey has generated a comprehensive data clearinghouse of digital vector cliff edges and associated rates of cliff retreat along the open-ocean California coast. These data, which are presented herein, were compiled as part of the U.S. Geological Survey's National Assessment of Shoreline Change Project. Cliff erosion is a chronic problem along many coastlines of the United States. As coastal populations continue to grow and community infrastructures are threatened by erosion, there is increased demand for accurate information including rates and trends of coastal cliff retreat. There is also a critical need for these data to be consistent from one region to another. One objective of this work is to a develop standard, repeatable methodology for mapping and analyzing cliff edge retreat so that periodic, systematic, and internally consistent updates of cliff edge position and associated rates of erosion can be made at a national scale. This data compilation for open-ocean cliff edges for the California coast is a separate, yet related study to Hapke and others, 2006 documenting shoreline change along sandy shorelines of the California coast, which is itself one in a series that includes the Gulf of Mexico and the Southeast Atlantic coast (Morton and others, 2004; Morton and Miller, 2005). Future reports and data compilations will include coverage of the Northeast U.S., the Great Lakes, Hawaii and Alaska. Cliff edge change is determined by comparing the positions of one historical cliff edge digitized from maps with a modern cliff edge derived from topographic LIDAR (light detection and ranging) surveys. Historical cliff edges for the California coast represent the 1920s-1930s time-period; the most recent cliff edge was delineated using data collected between 1998 and 2002. End-point rate calculations were used to evaluate rates of erosion between the two cliff edges. Please refer to our full report on cliff edge erosion along the California

Climate Change, Northern Birds of Conservation Concern and Matching the Hotspots of Habitat Suitability with the Reserve Network

Science.gov (United States)

Virkkala, Raimo; Heikkinen, Risto K.; Fronzek, Stefan; Leikola, Niko

2013-01-01

National reserve networks are one of the most important means of species conservation, but their efficiency may be diminished due to the projected climatic changes. Using bioclimatic envelope models and spatial data on habitats and conservation areas, we studied how efficient the reserve network will be in preserving 100 forest, mire, marshland, and alpine bird species of conservation concern in Finland in 2051–2080 under three different climate scenarios. The occurrences of the studied bird species were related to the amount of habitat preferred by each species in the different boreal zones. We employed a novel integrated habitat suitability index that takes into account both the species’ probability of occurrence from the bioclimatic models and the availability of suitable habitat. Using this suitability index, the distribution of the topmost 5% suitability squares (“hotspots”) in the four bird species groups in the period 1971–2000 and under the three scenarios were compared with the location of reserves with the highest amounts of the four habitats to study the efficiency of the network. In species of mires, marshlands, and Arctic mountains, a high proportion of protected habitat was included in the 5% hotspots in the scenarios in 2051–2080, showing that protected areas cover a high proportion of occurrences of bird species. In contrast, in forests in the southern and middle boreal zones, only a small proportion of the protected habitat was included in the 5% hotspots, indicating that the efficiency of the protected area network will be insufficient for forest birds in the future. In the northern boreal zone, the efficiency of the reserve network in forests was highly dependent on the strength of climate change varying between the scenarios. Overall, there is no single solution to preserving biodiversity in a changing climate, but several future pathways should be considered. PMID:23700420

Preliminary study of soil liquefaction hazard at Terengganu shoreline, Peninsular Malaysia

Science.gov (United States)

Hashim, H.; Suhatril, M.; Hashim, R.

2017-06-01

Terengganu is a shoreline state located in Peninsular Malaysia which is a growing hub for port industries and tourism centre. The northern part offers pristine settings of a relax beach areas whereas the southern part are observed to be a growing centre for development. The serious erosion on soil deposit along the beach line presents vulnerable soil condition to soil liquefaction consists of sandy with low plasticity and shallow ground water. Moreover, local earthquake from nearby fault have present significant tremors over the past few years which need to be considered in the land usage or future development in catering the seismic loading. Liquefaction analysis based on field standard penetration of soil is applied on 546 boreholes scattered along the shoreline areas ranging 244 km of shoreline stretch. Based on simplified approach, it is found that more than 70% of the studied areas pose high liquefaction potential since there are saturated loose sand and silt deposits layer ranges at depth 3 m and up to 20 m. The presence of clay deposits and hard stratum at the remaining 30% of the studied areas shows good resistance to soil liquefaction hence making the area less significant to liquefaction hazard. Result indicates that liquefaction improving technique is advisable in future development of shoreline areas of Terengganu state.

A chronology for glacial Lake Agassiz shorelines along Upham's namesake transect

Science.gov (United States)

Lepper, Kenneth; Buell, Alex W.; Fisher, Timothy G.; Lowell, Thomas V.

2013-07-01

Four traditionally recognized strandline complexes in the southern basin of glacial Lake Agassiz are the Herman, Norcross, Tintah and Campbell, whose names correspond to towns in west-central Minnesota that lie on a linear transect defined by the Great Northern railroad grade; the active corridor for commerce at the time when Warren Upham was mapping and naming the shorelines of Lake Agassiz (ca.1880-1895). Because shorelines represent static water planes, their extension around the lake margin establishes time-synchronous lake levels. Transitions between shoreline positions represent significant water-level fluctuations. However, geologic ages have never been obtained from sites near the namesake towns in the vicinity of the southern outlet. Here we report the first geologic ages for Lake Agassiz shorelines obtained at field sites along the namesake transect, and evaluate the emerging chronology in light of other paleoclimate records. Our current work from 11 sampling sites has yielded 16 independent ages. These results combined with a growing OSL age data set for Lake Agassiz's southern basin provide robust age constraints for the Herman, Norcross and Campbell strandlines with averages and standard deviations of 14.1 ± 0.3 ka, 13.6 ± 0.2 ka, and 10.5 ± 0.3 ka, respectively.

Shoreline type and subsurface oil persistence in the Exon Valdez spill zone of Prince William Sound, Alaska

Energy Technology Data Exchange (ETDEWEB)

Page, D.S. [Bowdoin College, Brunswick, ME (United States). Dept. of Chemistry; Boehm, P.D. [Exponent Inc., Maynard, MA (United States); Neff, J.M. [Neff and Associates, Duxbury, MA (United States)

2008-07-01

The grounding of the Exxon Valdez in Prince William Sound (PWS), Alaska in the spring of 1989 resulted in the release of 258,000 barrels of Alaska North Slope crude oil into the marine environment. Nearly 800 km of shoreline were oiled to some degree. There was an unprecedented oil spill cleanup effort following the spill. The shoreline surveys of the spill zone were synthesized in this paper in an effort to demonstrate the relationship between shoreline type and persistence of subsurface oil (SSO) residues. Shoreline surveys of surface and SSO indicate rapid initial oil loss with a decline from about 800 linear km of PWS shoreline in 1989 to about 10 km of oiled shoreline in 1992. The period of rapid loss was attributed to natural physical process, biodegradation and cleanup activities that removed accessible spill remnants from shorelines. This was followed by a slower natural average loss rate for less accessible surface and SSO deposits of about 22 per cent per year for the period 1992-2001. This paper emphasized that shoreline type plays a key role in determining SSO persistence. The geology of PWS is complex. Many of the shorelines where SSO persists have armouring layers composed of hard, dense clasts, such as the quartzite boulders and cobblestones that can protect SSO deposits. Eighteen years after the spill, persistent SSO deposits in PWS shorelines remain protected from tidal water-washing and biodegradation by a surface boulder/cobble armour and low sediment porosity. The SSO deposits are in a physical/chemical form and location where they do not pose a health risk to intertidal biological communities and animals. The surveys continue to substantiate that remaining SSO deposits in PWS continue to degrade and go away slowly. 37 refs., 5 tabs., 7 figs.

Canadian coastal environments, shoreline processes, and oil spill cleanup

International Nuclear Information System (INIS)

Owens, E.H.

1994-03-01

The coastal zone is a dynamic environment, so that in developing practical and effective oil spill response strategies it is necessary to understand the forces that contribute to shore-zone processs. The coasts of Canada encompass a wide range of environments and are characterized by a variety of shoreline types that include the exposed, resistant cliffs of eastern Newfoundland and the sheltered marshes of the Beaufort Sea. A report is presented to provide an understanding of the dynamics and physical processes as they vary on the different coasts of Canada, including the Great Lakes. An outline of the general character and processes on a regional basis describes the coastal environments and introduces the literature that can be consulted for more specific information. The likely fate and persistence of oil that reaches the shoreline is discussed to provide the framework for development of spill response strategies and for the selection of appropriate shoreline cleanup or treatment countermeasures. Lessons learned from recent experience with major oil spills and field experiments are integrated into the discussion. Separate abstracts have been prepared for each of the four sections of this report. 502 refs., 5 figs

Microbial diversity in oiled and un-oiled shoreline sediments in the Norwegian Arctic

International Nuclear Information System (INIS)

Grossman, M.J.; Prince, R.C.; Garrett, R.M.; Garrett, K.K.; Bare, R.E.; O'Neil, K.R.; Sowlay, M.R.; Hinton, S.M.; Lee, K.; Sergy, G.A.; Guenette, C.C.

2000-01-01

Field trials were conducted at an oiled shoreline on the island of Spitsbergen to examine the effect of nutrient addition on the metabolic status, potential for aromatic hydrocarbon degradation, and the phylogenetic diversity of the microbial community in oiled Arctic shoreline sediments. IF-30 intermediate fuel grade oil was applied to the shoreline which was then divided into four plots. One was left untreated and two were tilled. Four applications of fertilizer were applied over a two-month period. Phospholipid fatty acid (PLFA), gene probe and 16S microbial community analysis suggested that bioremediation stimulated the metabolic activity, increased microbial biomass and genetic potential for aromatic hydrocarbon degradation, and increased the population of hydrocarbon degradation of an oiled Arctic shoreline microbial community. The results of this study are in agreement with the results from stimulation of oil biodegradation in temperate marine environments. It was concluded that biodegradation and fertilizer addition are feasible treatment methods for oil spills in Arctic regions. 31 refs., 3 tabs., 3 figs

Natural shorelines promote the stability of fish communities in an urbanized coastal system.

Directory of Open Access Journals (Sweden)

Steven B Scyphers

Full Text Available Habitat loss and fragmentation are leading causes of species extinctions in terrestrial, aquatic and marine systems. Along coastlines, natural habitats support high biodiversity and valuable ecosystem services but are often replaced with engineered structures for coastal protection or erosion control. We coupled high-resolution shoreline condition data with an eleven-year time series of fish community structure to examine how coastal protection structures impact community stability. Our analyses revealed that the most stable fish communities were nearest natural shorelines. Structurally complex engineered shorelines appeared to promote greater stability than simpler alternatives as communities nearest vertical walls, which are among the most prevalent structures, were most dissimilar from natural shorelines and had the lowest stability. We conclude that conserving and restoring natural habitats is essential for promoting ecological stability. However, in scenarios when natural habitats are not viable, engineered landscapes designed to mimic the complexity of natural habitats may provide similar ecological functions.

Multimer Formation Explains Allelic Suppression of PRDM9 Recombination Hotspots.

Science.gov (United States)

Baker, Christopher L; Petkova, Pavlina; Walker, Michael; Flachs, Petr; Mihola, Ondrej; Trachtulec, Zdenek; Petkov, Petko M; Paigen, Kenneth

2015-09-01

Genetic recombination during meiosis functions to increase genetic diversity, promotes elimination of deleterious alleles, and helps assure proper segregation of chromatids. Mammalian recombination events are concentrated at specialized sites, termed hotspots, whose locations are determined by PRDM9, a zinc finger DNA-binding histone methyltransferase. Prdm9 is highly polymorphic with most alleles activating their own set of hotspots. In populations exhibiting high frequencies of heterozygosity, questions remain about the influences different alleles have in heterozygous individuals where the two variant forms of PRDM9 typically do not activate equivalent populations of hotspots. We now find that, in addition to activating its own hotspots, the presence of one Prdm9 allele can modify the activity of hotspots activated by the other allele. PRDM9 function is also dosage sensitive; Prdm9+/- heterozygous null mice have reduced numbers and less active hotspots and increased numbers of aberrant germ cells. In mice carrying two Prdm9 alleles, there is allelic competition; the stronger Prdm9 allele can partially or entirely suppress chromatin modification and recombination at hotspots of the weaker allele. In cell cultures, PRDM9 protein variants form functional heteromeric complexes which can bind hotspots sequences. When a heteromeric complex binds at a hotspot of one PRDM9 variant, the other PRDM9 variant, which would otherwise not bind, can still methylate hotspot nucleosomes. We propose that in heterozygous individuals the underlying molecular mechanism of allelic suppression results from formation of PRDM9 heteromers, where the DNA binding activity of one protein variant dominantly directs recombination initiation towards its own hotspots, effectively titrating down recombination by the other protein variant. In natural populations with many heterozygous individuals, allelic competition will influence the recombination landscape.

Characterization and Prediction of Protein Phosphorylation Hotspots in Arabidopsis thaliana.

Science.gov (United States)

Christian, Jan-Ole; Braginets, Rostyslav; Schulze, Waltraud X; Walther, Dirk

2012-01-01

The regulation of protein function by modulating the surface charge status via sequence-locally enriched phosphorylation sites (P-sites) in so called phosphorylation "hotspots" has gained increased attention in recent years. We set out to identify P-hotspots in the model plant Arabidopsis thaliana. We analyzed the spacing of experimentally detected P-sites within peptide-covered regions along Arabidopsis protein sequences as available from the PhosPhAt database. Confirming earlier reports (Schweiger and Linial, 2010), we found that, indeed, P-sites tend to cluster and that distributions between serine and threonine P-sites to their respected closest next P-site differ significantly from those for tyrosine P-sites. The ability to predict P-hotspots by applying available computational P-site prediction programs that focus on identifying single P-sites was observed to be severely compromised by the inevitable interference of nearby P-sites. We devised a new approach, named HotSPotter, for the prediction of phosphorylation hotspots. HotSPotter is based primarily on local amino acid compositional preferences rather than sequence position-specific motifs and uses support vector machines as the underlying classification engine. HotSPotter correctly identified experimentally determined phosphorylation hotspots in A. thaliana with high accuracy. Applied to the Arabidopsis proteome, HotSPotter-predicted 13,677 candidate P-hotspots in 9,599 proteins corresponding to 7,847 unique genes. Hotspot containing proteins are involved predominantly in signaling processes confirming the surmised modulating role of hotspots in signaling and interaction events. Our study provides new bioinformatics means to identify phosphorylation hotspots and lays the basis for further investigating novel candidate P-hotspots. All phosphorylation hotspot annotations and predictions have been made available as part of the PhosPhAt database at http://phosphat.mpimp-golm.mpg.de.

Efficient Assessment of Social Hotspots in the Supply Chains of 100 Product Categories Using the Social Hotspots Database

Directory of Open Access Journals (Sweden)

Catherine Benoît Norris

2014-10-01

Full Text Available Data collection, or the inventory step, is often the most labor-intensive phase of any Life Cycle Assessment (LCA study. The S-LCA Guidelines and numerous authors have recommended generic assessment in this first phase of an S-LCA. In an effort to identify the social hotspots in the supply chains of 100 product categories during just a few months’ time, adopting a streamlined approach was essential. The Social Hotspots Database system was developed by New Earth over 5 years. It includes a Global Input Output (IO model derived from the Global Trade Analysis Project, a Worker Hours Model constructed using annual wage payments and wage rates by country and sector, and Social Theme Tables covering 22 themes within five Social Impact Categories—Labor Rights and Decent Work, Health and Safety, Human Rights, Governance and Community Impacts. The data tables identify social risks for over 100 indicators. Both the ranking of worker hour intensity and the risk levels across multiple social themes for the Country Specific Sectors (CSS within a product category supply chain are used to calculate Social Hotspots Indexes (SHI using an additive weighting method. The CSS with the highest SHI are highlighted as social hotspots within the supply chain of the product in question. This system was tested in seven case studies in 2011. In order to further limit the number of hotspots, a set of prioritization rules was applied. This paper will review the method implemented to study the social hotspots of the 100 product categories and provide one detailed example. Limitations of the approach and recommended research avenues will be outlined.

HOTSPOT, Field Evaluation of Radiation Release from Nuclear Accident

International Nuclear Information System (INIS)

2001-01-01

1 - Description of program or function: The HOTSPOT Health Physics codes were created to provide Health Physics personnel with a fast, field-portable calculational tool for evaluating accidents involving radioactive materials. HOTSPOT codes are a first-order approximation of the radiation effects associated with the atmospheric release of radioactive materials. HOTSPOT programs are reasonably accurate for a timely initial assessment. More importantly, HOTSPOT codes produce a consistent output for the same input assumptions and minimize the probability of errors associated with reading a graph incorrectly or scaling a universal nomogram during an emergency. Four general programs, PLUME, EXPLOSION, FIRE, and RESUSPENSION, calculate a downwind assessment following the release of radioactive material resulting from a continuous or puff release, explosive release, fuel fire, or an area contamination event. Other programs deal with the release of plutonium, uranium, and tritium to expedite an initial assessment of accidents involving nuclear weapons. Additional programs estimate the dose commitment from inhalation of any one of the radionuclides listed in the database of radionuclides, calibrate a radiation survey instrument for ground survey measurements, and screening of plutonium uptake in the lung. The HOTSPOT codes are fast, portable, easy to use, and fully documented. HOTSPOT supports color high resolution monitors and printers for concentration plots and contours. The codes have been extensively used by the DOS community since 1985. Version 8 allows users to add their own custom radionuclide library and to create custom radionuclide mixtures. It also includes wet deposition to approximate the enhanced plume depletion and ground deposition due to the effects of rain. Additional release geometry options for TRITIUM RELEASE and GENERAL PLUME were added, as well as several other enhancements and improvements. See info (f1) from the main HOTSPOT menu for additional

Using ecological niche modeling to determine avian richness hotspots

Directory of Open Access Journals (Sweden)

R. Mirzaei

2017-04-01

Full Text Available Understanding distributions of wildlife species is a key step towards identifying biodiversity hotspots and designing effective conservation strategies. In this paper, the spatial pattern of diversity of birds in Golestan Province, Iran was estimated. Ecological niche modeling was used to determine distributions of 144 bird species across the province using a maximum entropy algorithm. Richness maps across all birds, and separately for rare and threatened species, were prepared as approximations to hotspots. Results showed close similarity between hotspots for all birds and those for rare birds; hotspots were concentrated in the southern and especially the southwestern parts of the province. Hotspots for threatened birds tended more to the central and especially the western parts of the province, which include coastal habitats. Based on three criteria, it is clear that the western part is the most important area of the province in terms of bird Faunas. Despite some shortcomings, hotspot analysis for birds could be applied to guide conservation efforts and provide useful tool towards efficient conservation action.

Thermally-Driven Mantle Plumes Reconcile Hot-spot Observations

Science.gov (United States)

Davies, D.; Davies, J.

2008-12-01

Hot-spots are anomalous regions of magmatism that cannot be directly associated with plate tectonic processes (e.g. Morgan, 1972). They are widely regarded as the surface expression of upwelling mantle plumes. Hot-spots exhibit variable life-spans, magmatic productivity and fixity (e.g. Ito and van Keken, 2007). This suggests that a wide-range of upwelling structures coexist within Earth's mantle, a view supported by geochemical and seismic evidence, but, thus far, not reproduced by numerical models. Here, results from a new, global, 3-D spherical, mantle convection model are presented, which better reconcile hot-spot observations, the key modification from previous models being increased convective vigor. Model upwellings show broad-ranging dynamics; some drift slowly, while others are more mobile, displaying variable life-spans, intensities and migration velocities. Such behavior is consistent with hot-spot observations, indicating that the mantle must be simulated at the correct vigor and in the appropriate geometry to reproduce Earth-like dynamics. Thermally-driven mantle plumes can explain the principal features of hot-spot volcanism on Earth.

Quantifying the effectiveness of shoreline armoring removal on coastal biota of Puget Sound.

Science.gov (United States)

Lee, Timothy S; Toft, Jason D; Cordell, Jeffery R; Dethier, Megan N; Adams, Jeffrey W; Kelly, Ryan P

2018-01-01

Shoreline armoring is prevalent around the world with unprecedented human population growth and urbanization along coastal habitats. Armoring structures, such as riprap and bulkheads, that are built to prevent beach erosion and protect coastal infrastructure from storms and flooding can cause deterioration of habitats for migratory fish species, disrupt aquatic-terrestrial connectivity, and reduce overall coastal ecosystem health. Relative to armored shorelines, natural shorelines retain valuable habitats for macroinvertebrates and other coastal biota. One question is whether the impacts of armoring are reversible, allowing restoration via armoring removal and related actions of sediment nourishment and replanting of native riparian vegetation. Armoring removal is targeted as a viable option for restoring some habitat functions, but few assessments of coastal biota response exist. Here, we use opportunistic sampling of pre- and post-restoration data for five biotic measures (wrack % cover, saltmarsh % cover, number of logs, and macroinvertebrate abundance and richness) from a set of six restored sites in Puget Sound, WA, USA. This broad suite of ecosystem metrics responded strongly and positively to armor removal, and these results were evident after less than one year. Restoration responses remained positive and statistically significant across different shoreline elevations and temporal trajectories. This analysis shows that removing shoreline armoring is effective for restoration projects aimed at improving the health and productivity of coastal ecosystems, and these results may be widely applicable.

Quantifying the effectiveness of shoreline armoring removal on coastal biota of Puget Sound

Directory of Open Access Journals (Sweden)

Timothy S. Lee

2018-02-01

Full Text Available Shoreline armoring is prevalent around the world with unprecedented human population growth and urbanization along coastal habitats. Armoring structures, such as riprap and bulkheads, that are built to prevent beach erosion and protect coastal infrastructure from storms and flooding can cause deterioration of habitats for migratory fish species, disrupt aquatic–terrestrial connectivity, and reduce overall coastal ecosystem health. Relative to armored shorelines, natural shorelines retain valuable habitats for macroinvertebrates and other coastal biota. One question is whether the impacts of armoring are reversible, allowing restoration via armoring removal and related actions of sediment nourishment and replanting of native riparian vegetation. Armoring removal is targeted as a viable option for restoring some habitat functions, but few assessments of coastal biota response exist. Here, we use opportunistic sampling of pre- and post-restoration data for five biotic measures (wrack % cover, saltmarsh % cover, number of logs, and macroinvertebrate abundance and richness from a set of six restored sites in Puget Sound, WA, USA. This broad suite of ecosystem metrics responded strongly and positively to armor removal, and these results were evident after less than one year. Restoration responses remained positive and statistically significant across different shoreline elevations and temporal trajectories. This analysis shows that removing shoreline armoring is effective for restoration projects aimed at improving the health and productivity of coastal ecosystems, and these results may be widely applicable.

Forest and Land Fire Prevention Through the Hotspot Movement Pattern Approach

Science.gov (United States)

Turmudi, T.; Kardono, P.; Hartanto, P.; Ardhitasari, Y.

2018-02-01

Indonesia has experienced a great forest fire disaster in 2015. The losses incurred were enormous. But actually the incidence of forest and land fires occurs almost every year. Various efforts were made to cope with the fire disaster. The appearance of a hotspot becomes an early indication of the fire incident both location and time. By studying the location and time of the hotspot's appearance indicates that the hotspot has certain movement patterns from year to year. This study aims to show the pattern of movement of hotspots from year to year that can be used for the prevention of forest and land fires. The method used is time series analysis of land cover and hotspot distribution. The data used were land cover data from 2005 to 2016, hotspot data from 2005 to 2016. The location of this study is the territory of Meranti Kepulauan District. The results show that the highest hotspot is 425 hotspots occurs in the shrubs and bushes. From year to year, the pattern of hotspot movement occurs in the shrubs and bushes cover. The hotspot pattern follows the direction of unused land for cultivation and is dominated by shrubs. From these results, we need to pay more attentiont for the land with the cover of shrubs adjacent to the cultivated land.

Overlapping hotspots in CDRs are critical sites for V region diversification.

Science.gov (United States)

Wei, Lirong; Chahwan, Richard; Wang, Shanzhi; Wang, Xiaohua; Pham, Phuong T; Goodman, Myron F; Bergman, Aviv; Scharff, Matthew D; MacCarthy, Thomas

2015-02-17

Activation-induced deaminase (AID) mediates the somatic hypermutation (SHM) of Ig variable (V) regions that is required for the affinity maturation of the antibody response. An intensive analysis of a published database of somatic hypermutations that arose in the IGHV3-23*01 human V region expressed in vivo by human memory B cells revealed that the focus of mutations in complementary determining region (CDR)1 and CDR2 coincided with a combination of overlapping AGCT hotspots, the absence of AID cold spots, and an abundance of polymerase eta hotspots. If the overlapping hotspots in the CDR1 or CDR2 did not undergo mutation, the frequency of mutations throughout the V region was reduced. To model this result, we examined the mutation of the human IGHV3-23*01 biochemically and in the endogenous heavy chain locus of Ramos B cells. Deep sequencing revealed that IGHV3-23*01 in Ramos cells accumulates AID-induced mutations primarily in the AGCT in CDR2, which was also the most frequent site of mutation in vivo. Replacing the overlapping hotspots in CDR1 and CDR2 with neutral or cold motifs resulted in a reduction in mutations within the modified motifs and, to some degree, throughout the V region. In addition, some of the overlapping hotspots in the CDRs were at sites in which replacement mutations could change the structure of the CDR loops. Our analysis suggests that the local sequence environment of the V region, and especially of the CDR1 and CDR2, is highly evolved to recruit mutations to key residues in the CDRs of the IgV region.

Seed plant features, distribution patterns, diversity hotspots, and conservation gaps in Xinjiang, China

Directory of Open Access Journals (Sweden)

Jihong Huang

2018-06-01

Full Text Available The flora in Xinjiang is unique. Decisions about biodiversity conservation and management based on seed plant diversity hotspots and conservation gaps in Xinjiang are essential to maintain this unique flora. Based on a species distribution dataset of seed plants, we measured seed plant diversity using species richness and phylogenetic diversity indices. Five percent of Xinjiang’s total land area with the highest biodiversity was used to identify hotspots for each index. In total, eight hotspots were identified. Most hotspots were located in mountainous areas, mainly in the Tianshan Mountains and Altai Mountains. Furthermore, we detected conservation gaps for Xinjiang’s seed flora hotspots by overlaying nature reserve maps on to maps of identified hotspots and we designated priority conservation gaps for hotspots by overlaying global biodiversity hotspot maps on to hotspot conservation gaps maps. Most of Xinjiang’s seed plant hotspots are poorly protected; only 10.45% of these hotspots were covered by nature reserves. We suggest that it is essential to promote network function of nature reserves within these hotspots in Xinjiang to conserve this unique flora.

Modeling Resource Hotspots: Critical Linkages and Processes

Science.gov (United States)

Daher, B.; Mohtar, R.; Pistikopoulos, E.; McCarl, B. A.; Yang, Y.

2017-12-01

Growing demands for interconnected resources emerge in the form of hotspots of varying characteristics. The business as usual allocation model cannot address the current, let alone anticipated, complex and highly interconnected resource challenges we face. A new paradigm for resource allocation must be adopted: one that identifies cross-sectoral synergies and, that moves away from silos to recognition of the nexus and integration of it. Doing so will result in new opportunities for business growth, economic development, and improved social well-being. Solutions and interventions must be multi-faceted; opportunities should be identified with holistic trade-offs in mind. No single solution fits all: different hotspots will require distinct interventions. Hotspots have varying resource constraints, stakeholders, goals and targets. The San Antonio region represents a complex resource hotspot with promising potential: its rapidly growing population, the Eagle Ford shale play, and the major agricultural activity there makes it a hotspot with many competing demands. Stakeholders need tools to allow them to knowledgeably address impending resource challenges. This study will identify contemporary WEF nexus questions and critical system interlinkages that will inform the modeling of the tightly interconnected resource systems and stresses using the San Antonio Region as a base; it will conceptualize a WEF nexus modeling framework, and develop assessment criteria to inform integrative planning and decision making.

Towards biodiversity hotspots effective for conserving mammals with small geographic ranges

Science.gov (United States)

Carrara, Rodolfo; San Blas, Germán; Agrain, Federico; Roig-Juñent, Sergio

2017-01-01

The main goal of using global biodiversity hotspots for conservation purposes is to protect taxa with small geographic ranges because these are highly vulnerable to extinction. However, the extent to what different hotspots types are effective for meeting this goal remains controversial because hotspots have been previously defined as either the richest or most threatened and richest sites in terms of total, endemic or threatened species. In this regard, the use of species richness to set conservation priorities is widely discussed because strategies focused on this diversity measure tend to miss many of the taxa with small geographic ranges. Here we use data on global terrestrial mammal distributions to show that, hotspots of total species, endemism and threat defined in terms of species richness are effective in including 27%, 29% and 11% respectively, of the taxa with small geographic ranges. Whilst, the same hotspot types defined in terms of a simple diversity index, which is a function of species richness and range-size rarity, include 68%, 44% and 90% respectively, of these taxa. In addition, we demonstrate that index hotspot types are highly efficient because they conserve 79% of mammal species (21% more species than richness hotspot types), with 59% of species shared by three hotspot types (31% more than richness hotspot types). These results suggest that selection of different diversity measures to define hotspots may strongly affect the achievement of conservation goals.

HOTSPOT: The Snake River Scientifi c Drilling Project— Tracking the Yellowstone Hotspot Through Space and Time

Directory of Open Access Journals (Sweden)

Douglas F. Williams

2006-09-01

Full Text Available The project “HOTSPOT: Scientifi c Drilling of the Snake　River Plain” held its inaugural workshop in Twin Falls, Idaho,　U.S.A. on 18–21 May 2006. This inter-disciplinary workshop,　sponsored by the International Continental Scientifi c Drilling　Program (ICDP, explored the major scientifi c and logistical　issues central to a transect of boreholes along the hotspot　track and addressing the geochemical evolution of continental　lithosphere in response to interaction with deepseated　mantle hotspots or plumes. A series of four to six bore　holes is envisioned, each about 1.5–2.0 km deep and located　along the axis of the Snake River Plain. The holes will　specific ally target the origin and evolution of hotspot-related　volcanism in space and time. To accomplish scientific and　logistical planning, sixty scientists from six countries　attended the workshop.

Characteristics of suicide hotspots on the Belgian railway network.

Science.gov (United States)

Debbaut, Kevin; Krysinska, Karolina; Andriessen, Karl

2014-01-01

In 2004, railway suicide accounted for 5.3% of all suicides in Belgium. In 2008, Infrabel (Manager of the Belgian Railway Infrastructure) introduced a railway suicide prevention programme, including identification of suicide hotspots, i.e., areas of the railway network with an elevated incidence of suicide. The study presents an analysis of 43 suicide hotspots based on Infrabel data collected during field visits and semi-structured interviews conducted in mental health facilities in the vicinity of the hotspots. Three major characteristics of the hotspots were accessibility, anonymity, and vicinity of a mental health institution. The interviews identified several risk and protective factors for railway suicide, including the training of staff, introduction of a suicide prevention policy, and the role of the media. In conclusion, a comprehensive railway suicide prevention programme should continuously safeguard and monitor hotspots, and should be embedded in a comprehensive suicide prevention programme in the community.

From global to regional and back again: common climate stressors of marine ecosystems relevant for adaptation across five ocean warming hotspots.

Science.gov (United States)

Popova, Ekaterina; Yool, Andrew; Byfield, Valborg; Cochrane, Kevern; Coward, Andrew C; Salim, Shyam S; Gasalla, Maria A; Henson, Stephanie A; Hobday, Alistair J; Pecl, Gretta T; Sauer, Warwick H; Roberts, Michael J

2016-06-01

Ocean warming 'hotspots' are regions characterized by above-average temperature increases over recent years, for which there are significant consequences for both living marine resources and the societies that depend on them. As such, they represent early warning systems for understanding the impacts of marine climate change, and test-beds for developing adaptation options for coping with those impacts. Here, we examine five hotspots off the coasts of eastern Australia, South Africa, Madagascar, India and Brazil. These particular hotspots have underpinned a large international partnership that is working towards improving community adaptation by characterizing, assessing and projecting the likely future of coastal-marine food resources through the provision and sharing of knowledge. To inform this effort, we employ a high-resolution global ocean model forced by Representative Concentration Pathway 8.5 and simulated to year 2099. In addition to the sea surface temperature, we analyse projected stratification, nutrient supply, primary production, anthropogenic CO2 -driven ocean acidification, deoxygenation and ocean circulation. Our simulation finds that the temperature-defined hotspots studied here will continue to experience warming but, with the exception of eastern Australia, may not remain the fastest warming ocean areas over the next century as the strongest warming is projected to occur in the subpolar and polar areas of the Northern Hemisphere. Additionally, we find that recent rapid change in SST is not necessarily an indicator that these areas are also hotspots of the other climatic stressors examined. However, a consistent facet of the hotspots studied here is that they are all strongly influenced by ocean circulation, which has already shown changes in the recent past and is projected to undergo further strong change into the future. In addition to the fast warming, change in local ocean circulation represents a distinct feature of present and future

Hurricane Sandy beach response and recovery at Fire Island, New York: Shoreline and beach profile data, October 2012 to October 2014

Science.gov (United States)

Hehre Henderson, Rachel E.; Hapke, Cheryl J.; Brenner, Owen T.; Reynolds, Billy J.

2015-04-30

In response to the forecasted impact of Hurricane Sandy, which made landfall on October 29, 2012, the U.S. Geological Survey (USGS) began a substantial data-collection effort to assess the morphological impacts to the beach and dune system at Fire Island, New York. Global positioning system (GPS) field surveys of the beach and dunes were conducted just prior to and after landfall and these data were used to quantify change in several focus areas. In order to quantify morphologic change along the entire length of the island, pre-storm (May 2012) and post-storm (November 2012) lidar and aerial photography were used to assess changes to the shoreline and beach.As part of the USGS Hurricane Sandy Supplemental Fire Island Study, the beach is monitored periodically to enable better understanding of post-Sandy recovery. The alongshore state of the beach is recorded using a differential global positioning system (DGPS) to collect data around the mean high water (MHW; 0.46 meter North American Vertical Datum of 1988) to derive a shoreline, and the cross-shore response and recovery are measured along a series of 10 profiles.Overall, Hurricane Sandy substantially altered the morphology of Fire Island. However, the coastal system rapidly began to recover after the 2012­–13 winter storm season and continues to recover in the form of volume gains and shoreline adjustment.

78 FR 33051 - Non-Rock Alternatives to Shoreline Protection Demonstration Project (LA-16) Iberia, Jefferson...

Science.gov (United States)

2013-06-03

... DEPARTMENT OF AGRICULTURE Natural Resources Conservation Service Non-Rock Alternatives to...-Rock Alternatives to Shoreline Protection Demonstration Project (LA-16), Iberia, Jefferson, and... and environmental limitations preclude the use of rock structures. The shoreline protection systems...

Characterization Urban Heat Island Effect and Modelling of Secondary Pollutant Formations at Urban Hotspots

Science.gov (United States)

Undi, G. S. N. V. K. S. N. S.

2017-12-01

More than 60 percent of the world population is living the urban zones by 2020. This socio of economic transformations will bring considerable changes to the ambient atmosphere. More than 70 percent of the air pollutants in the urban hotspots are from vehicular emissions. in the urban hotspots. In the urban hotspots, the meteorological and dispersion conditions will have different characteristics than in surrounding rural areas. Reactive pollutants transformations are drastically influenced by the local meteorological conditions. The complexity of urban structure alters the pollutants dispersion in the hotspots. This relationship between urban meteorology and air pollution is an important aspect of consideration. In the atmosphere, drastic changes have been noticed from micro to regional and global scales. However, the characteristics of air pollutant emissions vary with time and space, favorable dispersion conditions transport them from local to regional scale. In the present study, the impact of land cover change on Urban Heat Island effect (UHI) has been characterized by considering the three different zones with varying land use patterns. An attempt has been made to estimate the impact of UHI on secondary pollutants (O3) transformations. Envi-Met model has been used to characterize the UHI intensity for the selected zones. Meteorological and air quality measurements were carried out at the selected locations. The diurnal variations of Ozone (O3) concentration for three zones are correlated with the UHI intensity. And the monitoring and model results of O3 concentrations are in good agreement. It is observed from the obtained model results that the metrological parameters influence on local air quality is significant in urban zones.

Pollination ecology and the possible impacts of environmental change in the Southwest Australian Biodiversity Hotspot.

Science.gov (United States)

Phillips, Ryan D; Hopper, Stephen D; Dixon, Kingsley W

2010-02-12

The Southwest Australian Biodiversity Hotspot contains an exceptionally diverse flora on an ancient, low-relief but edaphically diverse landscape. Since European colonization, the primary threat to the flora has been habitat clearance, though climate change is an impending threat. Here, we review (i) the ecology of nectarivores and biotic pollination systems in the region, (ii) the evidence that trends in pollination strategies are a consequence of characteristics of the landscape, and (iii) based on these discussions, provide predictions to be tested on the impacts of environmental change on pollination systems. The flora of southwestern Australia has an exceptionally high level of vertebrate pollination, providing the advantage of highly mobile, generalist pollinators. Nectarivorous invertebrates are primarily generalist foragers, though an increasing number of colletid bees are being recognized as being specialized at the level of plant family or more rarely genus. While generalist pollination strategies dominate among insect-pollinated plants, there are some cases of extreme specialization, most notably the multiple evolutions of sexual deception in the Orchidaceae. Preliminary data suggest that bird pollination confers an advantage of greater pollen movement and may represent a mechanism for minimizing inbreeding in naturally fragmented populations. The effects of future environmental change are predicted to result from a combination of the resilience of pollination guilds and changes in their foraging and dispersal behaviour.

Shoreline erosion and decadal sediment accumulation in the Tar-Pamlico estuary, North Carolina, USA: A source-to-sink analysis

Science.gov (United States)

Eulie, Devon O.; Corbett, D. Reide; Walsh, J. P.

2018-03-01

Estuaries contain vital habitats and it is important to understand how these areas respond to human activities and natural processes such as sea-level rise and wave attack. As estuarine shorelines erode or become modified with hard structures, there is potential for significantly altering the availability of sediment and the filling of coastal systems. This study used a source-to-sink approach and quantified rates of shoreline erosion in the Tar-Pamlico sub-estuary, a tributary of the larger Albemarle-Pamlico Estuarine System (APES). The average shoreline change rate (SCR) determined using an end-point method was -0.5 ± 0.9 m yr-1 for the Tar-Pamlico. Incorporating bulk density estimates, this contributes 0.6 × 105 tons of fine sediment to the system annually, or after accounting for fluvial input, about 40% of the total sediment supply to the sub-estuary. The role of the Tar-Pamlico as a sink for these sediments was addressed using the radionuclide tracers 210Pb and 137Cs. Radionuclide activities and sediment accumulation rates identified several depositional regions, in particular in the middle of the estuary. Linear sediment accumulation rates ranged from 0.10 ± 0.02 to 0.38 ± 0.02 g cm-2 yr-1, and total storage of fine sediment in the system was 1.6 × 105 t yr-1. It was not possible to confidently discern a change in the rate of shoreline erosion or seabed accumulation. A preliminary budget for fine sediments (grain-size <63 μm) was then calculated to compare erosional sources with sedimentary sinks. Almost all (∼93.0%) of the fine sediment entering the system was accumulated and stored, while only about 7.0% was exported to Pamlico Sound.

Quantile-based permutation thresholds for quantitative trait loci hotspots.

Science.gov (United States)

Neto, Elias Chaibub; Keller, Mark P; Broman, Andrew F; Attie, Alan D; Jansen, Ritsert C; Broman, Karl W; Yandell, Brian S

2012-08-01

Quantitative trait loci (QTL) hotspots (genomic locations affecting many traits) are a common feature in genetical genomics studies and are biologically interesting since they may harbor critical regulators. Therefore, statistical procedures to assess the significance of hotspots are of key importance. One approach, randomly allocating observed QTL across the genomic locations separately by trait, implicitly assumes all traits are uncorrelated. Recently, an empirical test for QTL hotspots was proposed on the basis of the number of traits that exceed a predetermined LOD value, such as the standard permutation LOD threshold. The permutation null distribution of the maximum number of traits across all genomic locations preserves the correlation structure among the phenotypes, avoiding the detection of spurious hotspots due to nongenetic correlation induced by uncontrolled environmental factors and unmeasured variables. However, by considering only the number of traits above a threshold, without accounting for the magnitude of the LOD scores, relevant information is lost. In particular, biologically interesting hotspots composed of a moderate to small number of traits with strong LOD scores may be neglected as nonsignificant. In this article we propose a quantile-based permutation approach that simultaneously accounts for the number and the LOD scores of traits within the hotspots. By considering a sliding scale of mapping thresholds, our method can assess the statistical significance of both small and large hotspots. Although the proposed approach can be applied to any type of heritable high-volume "omic" data set, we restrict our attention to expression (e)QTL analysis. We assess and compare the performances of these three methods in simulations and we illustrate how our approach can effectively assess the significance of moderate and small hotspots with strong LOD scores in a yeast expression data set.

Investigating avian influenza infection hotspots in old-world shorebirds.

Directory of Open Access Journals (Sweden)

Nicolas Gaidet

Full Text Available Heterogeneity in the transmission rates of pathogens across hosts or environments may produce disease hotspots, which are defined as specific sites, times or species associations in which the infection rate is consistently elevated. Hotspots for avian influenza virus (AIV in wild birds are largely unstudied and poorly understood. A striking feature is the existence of a unique but consistent AIV hotspot in shorebirds (Charadriiformes associated with a single species at a specific location and time (ruddy turnstone Arenaria interpres at Delaware Bay, USA, in May. This unique case, though a valuable reference, limits our capacity to explore and understand the general properties of AIV hotspots in shorebirds. Unfortunately, relatively few shorebirds have been sampled outside Delaware Bay and they belong to only a few shorebird families; there also has been a lack of consistent oropharyngeal sampling as a complement to cloacal sampling. In this study we looked for AIV hotspots associated with other shorebird species and/or with some of the larger congregation sites of shorebirds in the old world. We assembled and analysed a regionally extensive dataset of AIV prevalence from 69 shorebird species sampled in 25 countries across Africa and Western Eurasia. Despite this diverse and extensive coverage we did not detect any new shorebird AIV hotspots. Neither large shorebird congregation sites nor the ruddy turnstone were consistently associated with AIV hotspots. We did, however, find a low but widespread circulation of AIV in shorebirds that contrast with the absence of AIV previously reported in shorebirds in Europe. A very high AIV antibody prevalence coupled to a low infection rate was found in both first-year and adult birds of two migratory sandpiper species, suggesting the potential existence of an AIV hotspot along their migratory flyway that is yet to be discovered.

Shoreline stability in the vicinity of Cochin Harbour

Digital Repository Service at National Institute of Oceanography (India)

PrasannaKumar, S.; Vethamony, P.

, showing stability over a period of one year. The growth of shoreline north of Cochin harbour channel takes place at the cost of sediment that should have otherwise by-passed the estuarine mouth. During the southwest monsoon the development of opposing...

Fine-scale maps of recombination rates and hotspots in the mouse genome.

Science.gov (United States)

Brunschwig, Hadassa; Levi, Liat; Ben-David, Eyal; Williams, Robert W; Yakir, Benjamin; Shifman, Sagiv

2012-07-01

Recombination events are not uniformly distributed and often cluster in narrow regions known as recombination hotspots. Several studies using different approaches have dramatically advanced our understanding of recombination hotspot regulation. Population genetic data have been used to map and quantify hotspots in the human genome. Genetic variation in recombination rates and hotspots usage have been explored in human pedigrees, mouse intercrosses, and by sperm typing. These studies pointed to the central role of the PRDM9 gene in hotspot modulation. In this study, we used single nucleotide polymorphisms (SNPs) from whole-genome resequencing and genotyping studies of mouse inbred strains to estimate recombination rates across the mouse genome and identified 47,068 historical hotspots--an average of over 2477 per chromosome. We show by simulation that inbred mouse strains can be used to identify positions of historical hotspots. Recombination hotspots were found to be enriched for the predicted binding sequences for different alleles of the PRDM9 protein. Recombination rates were on average lower near transcription start sites (TSS). Comparing the inferred historical recombination hotspots with the recent genome-wide mapping of double-strand breaks (DSBs) in mouse sperm revealed a significant overlap, especially toward the telomeres. Our results suggest that inbred strains can be used to characterize and study the dynamics of historical recombination hotspots. They also strengthen previous findings on mouse recombination hotspots, and specifically the impact of sequence variants in Prdm9.

Palaeoenvironment and shoreline displacement on Suursaari Island, the Gulf of Finland

Directory of Open Access Journals (Sweden)

Atko Heinsalu

2000-01-01

Full Text Available The island of Suursaari in the middle of the Gulf of Finland is exceptionally high (175 m a.s.l.. Sediment profiles from one mire and three lakes were investigated using diatom and pollen analysis, radiocarbon dating and levelling of the elevations of ancient shorelines. The pollen stratigraphy of the Lounatkorkiasuo Mire sediment suggests a sedimentary record dating from the late Allerød.The development of late-glacial vegetation went through the same phases as in southern Finland, however these are probably somewhat earlier on the island of Suursaari. There are differences in the Holocene vegetation history of the higher and lower areas of the island. Lake Ruokalahenjärvi was isolated around 10 000 BP during the initial phase of the Yoldia Sea and the diatom assemblage indicates that at that time brackish-water flow had not penetrated into the Gulfof Finland. Diatoms from the isolation sediments of Lake Liivalahenjärvi and Lake Veteljärvi indicate a freshwater environment for the Yoldia Sea final phase at 9500–9600 BP. Levelling of coastal formations on Suursaari Island reveals that the Late Weichselian and early Holocene ancient shorelines are 5–15 m higher than expected from the isobase data for similar land uplift areas on the mainland.The anomalous shoreline levels on Suursaari Island may be explained byirregular land uplift. By the time of the Litorina Sea differences in shoreline altitudes had disappeared.

A measurement concept for hot-spot BRDFs from space

Energy Technology Data Exchange (ETDEWEB)

Gerstl, S.A.W.

1996-09-01

Several concepts for canopy hot-spot measurements from space have been investigated. The most promising involves active illumination and bistatic detection that would allow hot-spot angular distribution (BRDF) measurements from space in a search-light mode. The concept includes a pointable illumination source, such as a laser operating at an atmospheric window wavelength, coupled with a number of high spatial-resolution detectors that are clustered around the illumination source in space, receiving photons nearly coaxial with the reto-reflection direction. Microwave control and command among the satellite cluster would allow orienting the direction of the laser beam as well as the focusing detectors simultaneously so that the coupled system can function like a search light with almost unlimited pointing capabilities. The concept is called the Hot-Spot Search-Light (HSSL) satellite. A nominal satellite altitude of 600 km will allow hot-spot BRDF measurements out to about 18 degrees phase angle. The distributed are taking radiometric measurements of the intensity wings of the hot-spot angular distribution without the need for complex imaging detectors. The system can be operated at night for increased signal-to-noise ratio. This way the hot-spot angular signatures can be quantified and parameterized in sufficient detail to extract the biophysical information content of plant architectures.

A measurement concept for hot-spot BRDFs from space

Science.gov (United States)

Gerstl, S.A.W.

1996-01-01

Several concepts for canopy hot-spot measurements from space have been investigated. The most promising involves active illumination and bistatic detection that would allow hot-spot angular distribution (BRDF) measurements from space in a search-light mode. The concept includes a pointable illumination source, such as a laser operating at an atmospheric window wavelength, coupled with a number of high spatial-resolution detectors that are clustered around the illumination source in space, receiving photons nearly coaxial with the reto-reflection direction. Microwave control and command among the satellite cluster would allow orienting the direction of the laser beam as well as the focusing detectors simultaneously so that the coupled system can function like a search light with almost unlimited pointing capabilities. The concept is called the Hot-Spot Search-Light (HSSL) satellite. A nominal satellite altitude of 600 km will allow hot-spot BRDF measurements out to about 18 degrees phase angle. The distributed are taking radiometric measurements of the intensity wings of the hot-spot angular distribution without the need for complex imaging detectors. The system can be operated at night for increased signal-to-noise ratio. This way the hot-spot angular signatures can be quantified and parameterized in sufficient detail to extract the biophysical information content of plant architectures.

Dynamic placement of plasmonic hotspots for super-resolution surface-enhanced Raman scattering.

Science.gov (United States)

Ertsgaard, Christopher T; McKoskey, Rachel M; Rich, Isabel S; Lindquist, Nathan C

2014-10-28

In this paper, we demonstrate dynamic placement of locally enhanced plasmonic fields using holographic laser illumination of a silver nanohole array. To visualize these focused "hotspots", the silver surface was coated with various biological samples for surface-enhanced Raman spectroscopy (SERS) imaging. Due to the large field enhancements, blinking behavior of the SERS hotspots was observed and processed using a stochastic optical reconstruction microscopy algorithm enabling super-resolution localization of the hotspots to within 10 nm. These hotspots were then shifted across the surface in subwavelength (hotspots. Using this technique, we also show that such subwavelength shifting and localization of plasmonic hotspots has potential for imaging applications. Interestingly, illuminating the surface with randomly shifting SERS hotspots was sufficient to completely fill in a wide field of view for super-resolution chemical imaging.

Photothermal probing of plasmonic hotspots with nanomechanical resonator

DEFF Research Database (Denmark)

Schmid, Silvan; Wu, Kaiyu; Rindzevicius, Tomas

2014-01-01

Plasmonic nanostructures (hotspots) are key components e.g. in plasmon-enhanced spectroscopy, plasmonic solar cells, or as nano heat sources. The characterization of single hotspots is still challenging due to a lack of experimental tools. We present the direct photothermal probing and mapping...

Identifying the Species Threat Hotspots from Global Supply Chains

OpenAIRE

Moran, Daniel; Kanemoto, Keiichiro

2016-01-01

Identifying species threat hotspots has been a successful approach for setting conservation priorities. One major challenge in conservation is that in many hotspots export industries continue to drive overexploitation. Conservation measures must consider not just the point of impact, but also the consumer demand that ultimately drives resource use. To understand which species threat hotspots are driven by which consumers, we have developed a new approach to link a set of biodiversity footprin...

Projected loss of a salamander diversity hotspot as a consequence of projected global climate change

Science.gov (United States)

Joseph R. Milanovich; William E. Peterman; Nathan P. Nibbelink; John C. Maerz

2010-01-01

Background: Significant shifts in climate are considered a threat to plants and animals with significant physiological limitations and limited dispersal abilities. The southern Appalachian Mountains are a global hotspot for plethodontid salamander diversity. Plethodontids are lungless ectotherms, so their ecology is strongly governed by temperature and precipitation....

Land-cover types, shoreline positions, and sand extents derived From Landsat satellite imagery, Assateague Island to Metompkin Island, Maryland and Virginia, 1984 to 2014

Science.gov (United States)

Bernier, Julie C.; Douglas, Steven H.; Terrano, Joseph F.; Barras, John A.; Plant, Nathaniel G.; Smith, Christopher G.

2015-12-17

The U.S. Geological Survey has a long history of responding to and documenting the impacts of storms along the Nation’s coasts and incorporating these data into storm impact and coastal change vulnerability assessments. These studies, however, have traditionally focused on sandy shorelines and sandy barrier-island systems, without consideration of impacts to coastal wetlands. The goal of the Barrier Island and Estuarine Wetland Physical Change Assessment project is to integrate a wetland-change assessment with existing coastal-change assessments for the adjacent sandy dunes and beaches, initially focusing on Assateague Island along the Maryland and Virginia coastline. Assateague Island was impacted by waves and storm surge associated with the passage of Hurricane Sandy in October 2012, including erosion and overwash along the ocean-facing sandy shoreline as well as erosion and overwash deposition in the back-barrier and estuarine bay environments.

The present and future role of coastal wetland vegetation in protecting shorelines: Answering recent challenges to the paradigm

Science.gov (United States)

Gedan, Keryn B.; Kirwan, Matthew L.; Wolanski, Eric; Barbier, Edward B.; Silliman, Brian R.

2011-01-01

For more than a century, coastal wetlands have been recognized for their ability to stabilize shorelines and protect coastal communities. However, this paradigm has recently been called into question by small-scale experimental evidence. Here, we conduct a literature review and a small meta-analysis of wave attenuation data, and we find overwhelming evidence in support of established theory. Our review suggests that mangrove and salt marsh vegetation afford context-dependent protection from erosion, storm surge, and potentially small tsunami waves. In biophysical models, field tests, and natural experiments, the presence of wetlands reduces wave heights, property damage, and human deaths. Meta-analysis of wave attenuation by vegetated and unvegetated wetland sites highlights the critical role of vegetation in attenuating waves. Although we find coastal wetland vegetation to be an effective shoreline buffer, wetlands cannot protect shorelines in all locations or scenarios; indeed large-scale regional erosion, river meandering, and large tsunami waves and storm surges can overwhelm the attenuation effect of vegetation. However, due to a nonlinear relationship between wave attenuation and wetland size, even small wetlands afford substantial protection from waves. Combining man-made structures with wetlands in ways that mimic nature is likely to increase coastal protection. Oyster domes, for example, can be used in combination with natural wetlands to protect shorelines and restore critical fishery habitat. Finally, coastal wetland vegetation modifies shorelines in ways (e.g. peat accretion) that increase shoreline integrity over long timescales and thus provides a lasting coastal adaptation measure that can protect shorelines against accelerated sea level rise and more frequent storm inundation. We conclude that the shoreline protection paradigm still stands, but that gaps remain in our knowledge about the mechanistic and context-dependent aspects of shoreline

The Efficiency of Random Forest Method for Shoreline Extraction from LANDSAT-8 and GOKTURK-2 Imageries

Science.gov (United States)

Bayram, B.; Erdem, F.; Akpinar, B.; Ince, A. K.; Bozkurt, S.; Catal Reis, H.; Seker, D. Z.

2017-11-01

Coastal monitoring plays a vital role in environmental planning and hazard management related issues. Since shorelines are fundamental data for environment management, disaster management, coastal erosion studies, modelling of sediment transport and coastal morphodynamics, various techniques have been developed to extract shorelines. Random Forest is one of these techniques which is used in this study for shoreline extraction.. This algorithm is a machine learning method based on decision trees. Decision trees analyse classes of training data creates rules for classification. In this study, Terkos region has been chosen for the proposed method within the scope of "TUBITAK Project (Project No: 115Y718) titled "Integration of Unmanned Aerial Vehicles for Sustainable Coastal Zone Monitoring Model - Three-Dimensional Automatic Coastline Extraction and Analysis: Istanbul-Terkos Example". Random Forest algorithm has been implemented to extract the shoreline of the Black Sea where near the lake from LANDSAT-8 and GOKTURK-2 satellite imageries taken in 2015. The MATLAB environment was used for classification. To obtain land and water-body classes, the Random Forest method has been applied to NIR bands of LANDSAT-8 (5th band) and GOKTURK-2 (4th band) imageries. Each image has been digitized manually and shorelines obtained for accuracy assessment. According to accuracy assessment results, Random Forest method is efficient for both medium and high resolution images for shoreline extraction studies.

THE EFFICIENCY OF RANDOM FOREST METHOD FOR SHORELINE EXTRACTION FROM LANDSAT-8 AND GOKTURK-2 IMAGERIES

Directory of Open Access Journals (Sweden)

B. Bayram

2017-11-01

Full Text Available Coastal monitoring plays a vital role in environmental planning and hazard management related issues. Since shorelines are fundamental data for environment management, disaster management, coastal erosion studies, modelling of sediment transport and coastal morphodynamics, various techniques have been developed to extract shorelines. Random Forest is one of these techniques which is used in this study for shoreline extraction.. This algorithm is a machine learning method based on decision trees. Decision trees analyse classes of training data creates rules for classification. In this study, Terkos region has been chosen for the proposed method within the scope of "TUBITAK Project (Project No: 115Y718 titled "Integration of Unmanned Aerial Vehicles for Sustainable Coastal Zone Monitoring Model – Three-Dimensional Automatic Coastline Extraction and Analysis: Istanbul-Terkos Example". Random Forest algorithm has been implemented to extract the shoreline of the Black Sea where near the lake from LANDSAT-8 and GOKTURK-2 satellite imageries taken in 2015. The MATLAB environment was used for classification. To obtain land and water-body classes, the Random Forest method has been applied to NIR bands of LANDSAT-8 (5th band and GOKTURK-2 (4th band imageries. Each image has been digitized manually and shorelines obtained for accuracy assessment. According to accuracy assessment results, Random Forest method is efficient for both medium and high resolution images for shoreline extraction studies.

Pleistocene Lake Bonneville and Eberswalde Crater of Mars: Quantitative Methods for Recognizing Poorly Developed Lacustrine Shorelines

Science.gov (United States)

Jewell, P. W.

2014-12-01

The ability to quantify shoreline features on Earth has been aided by advances in acquisition of high-resolution topography through laser imaging and photogrammetry. Well-defined and well-documented features such as the Bonneville, Provo, and Stansbury shorelines of Late Pleistocene Lake Bonneville are recognizable to the untrained eye and easily mappable on aerial photos. The continuity and correlation of lesser shorelines must rely quantitative algorithms for processing high-resolution data in order to gain widespread scientific acceptance. Using Savitsky-Golay filters and the geomorphic methods and criteria described by Hare et al. [2001], minor, transgressive, erosional shorelines of Lake Bonneville have been identified and correlated across the basin with varying degrees of statistical confidence. Results solve one of the key paradoxes of Lake Bonneville first described by G. K. Gilbert in the late 19th century and point the way for understanding climatically driven oscillations of the Last Glacial Maximum in the Great Basin of the United States. Similar techniques have been applied to the Eberswalde Crater area of Mars using HRiSE DEMs (1 m horizontal resolution) where a paleolake is hypothesized to have existed. Results illustrate the challenges of identifying shorelines where long term aeolian processes have degraded the shorelines and field validation is not possible. The work illustrates the promises and challenges of indentifying remnants of a global ocean elsewhere on the red planet.

TOXICITY TRENDS DURING AN OIL SPILL BIOREMEDIATION EXPERIMENT ON A SANDY SHORELINE IN DELAWARE, USA

Science.gov (United States)

A 13-week, refereed, inter-agency toxicity testing program involving five bioassay methods was used to document the effectiveness of shoreline bioremediation to accelerate toxicity reduction of an oiled sandy shoreline at Fowler Beach, Delaware, USA. The study was part of an inte...

Sampling effects on the identification of roadkill hotspots: Implications for survey design.

Science.gov (United States)

Santos, Sara M; Marques, J Tiago; Lourenço, André; Medinas, Denis; Barbosa, A Márcia; Beja, Pedro; Mira, António

2015-10-01

Although locating wildlife roadkill hotspots is essential to mitigate road impacts, the influence of study design on hotspot identification remains uncertain. We evaluated how sampling frequency affects the accuracy of hotspot identification, using a dataset of vertebrate roadkills (n = 4427) recorded over a year of daily surveys along 37 km of roads. "True" hotspots were identified using this baseline dataset, as the 500-m segments where the number of road-killed vertebrates exceeded the upper 95% confidence limit of the mean, assuming a Poisson distribution of road-kills per segment. "Estimated" hotspots were identified likewise, using datasets representing progressively lower sampling frequencies, which were produced by extracting data from the baseline dataset at appropriate time intervals (1-30 days). Overall, 24.3% of segments were "true" hotspots, concentrating 40.4% of roadkills. For different groups, "true" hotspots accounted from 6.8% (bats) to 29.7% (small birds) of road segments, concentrating from 60% (lizards, lagomorphs, carnivores) of roadkills. Spatial congruence between "true" and "estimated" hotspots declined rapidly with increasing time interval between surveys, due primarily to increasing false negatives (i.e., missing "true" hotspots). There were also false positives (i.e., wrong "estimated" hotspots), particularly at low sampling frequencies. Spatial accuracy decay with increasing time interval between surveys was higher for smaller-bodied (amphibians, reptiles, small birds, small mammals) than for larger-bodied species (birds of prey, hedgehogs, lagomorphs, carnivores). Results suggest that widely used surveys at weekly or longer intervals may produce poor estimates of roadkill hotspots, particularly for small-bodied species. Surveying daily or at two-day intervals may be required to achieve high accuracy in hotspot identification for multiple species. Copyright © 2015 Elsevier Ltd. All rights reserved.

Identifying Interactions that Determine Fragment Binding at Protein Hotspots.

Science.gov (United States)

Radoux, Chris J; Olsson, Tjelvar S G; Pitt, Will R; Groom, Colin R; Blundell, Tom L

2016-05-12

Locating a ligand-binding site is an important first step in structure-guided drug discovery, but current methods do little to suggest which interactions within a pocket are the most important for binding. Here we illustrate a method that samples atomic hotspots with simple molecular probes to produce fragment hotspot maps. These maps specifically highlight fragment-binding sites and their corresponding pharmacophores. For ligand-bound structures, they provide an intuitive visual guide within the binding site, directing medicinal chemists where to grow the molecule and alerting them to suboptimal interactions within the original hit. The fragment hotspot map calculation is validated using experimental binding positions of 21 fragments and subsequent lead molecules. The ligands are found in high scoring areas of the fragment hotspot maps, with fragment atoms having a median percentage rank of 97%. Protein kinase B and pantothenate synthetase are examined in detail. In each case, the fragment hotspot maps are able to rationalize a Free-Wilson analysis of SAR data from a fragment-based drug design project.

Advanced in-production hotspot prediction and monitoring with micro-topography

Science.gov (United States)

Fanton, P.; Hasan, T.; Lakcher, A.; Le-Gratiet, B.; Prentice, C.; Simiz, J.-G.; La Greca, R.; Depre, L.; Hunsche, S.

2017-03-01

At 28nm technology node and below, hot spot prediction and process window control across production wafers have become increasingly critical to prevent hotspots from becoming yield-limiting defects. We previously established proof of concept for a systematic approach to identify the most critical pattern locations, i.e. hotspots, in a reticle layout by computational lithography and combining process window characteristics of these patterns with across-wafer process variation data to predict where hotspots may become yield impacting defects [1,2]. The current paper establishes the impact of micro-topography on a 28nm metal layer, and its correlation with hotspot best focus variations across a production chip layout. Detailed topography measurements are obtained from an offline tool, and pattern-dependent best focus (BF) shifts are determined from litho simulations that include mask-3D effects. We also establish hotspot metrology and defect verification by SEM image contour extraction and contour analysis. This enables detection of catastrophic defects as well as quantitative characterization of pattern variability, i.e. local and global CD uniformity, across a wafer to establish hotspot defect and variability maps. Finally, we combine defect prediction and verification capabilities for process monitoring by on-product, guided hotspot metrology, i.e. with sampling locations being determined from the defect prediction model and achieved prediction accuracy (capture rate) around 75%

Geographic information systems-based expert system modelling for shoreline sensitivity to oil spill disaster in Rivers State, Nigeria

Directory of Open Access Journals (Sweden)

Olanrewaju Lawal

2017-07-01

Full Text Available In the absence of adequate and appropriate actions, hazards often result in disaster. Oil spills across any environment are very hazardous; thus, oil spill contingency planning is pertinent, supported by Environmental Sensitivity Index (ESI mapping. However, a significant data gap exists across many low- and middle-income countries in aspect of environmental monitoring. This study developed a geographic information system (GIS-based expert system (ES for shoreline sensitivity to oiling. It focused on the biophysical attributes of the shoreline with Rivers State as a case study. Data on elevation, soil, relative wave exposure and satellite imageries were collated and used for the development of ES decision rules within GIS. Results show that about 70% of the shoreline are lined with swamp forest/mangroves/nympa palm, and 97% have silt and clay as dominant sediment type. From the ES, six ranks were identified; 61% of the shoreline has a rank of 9 and 19% has a rank of 3 for shoreline sensitivity. A total of 568 km out of the 728 km shoreline is highly sensitive (ranks 7–10. There is a clear indication that the study area is a complex mixture of sensitive environments to oil spill. GIS-based ES with classification rules for shoreline sensitivity represents a rapid and flexible framework for automatic ranking of shoreline sensitivity to oiling. It is expected that this approach would kick-start sensitivity index mapping which is comprehensive and openly available to support disaster risk management around the oil producing regions of the country.

Fish-derived nutrient hotspots shape coral reef benthic communities.

Science.gov (United States)

Shantz, Andrew A; Ladd, Mark C; Schrack, Elizabeth; Burkepile, Deron E

2015-12-01

Animal-derived nutrients play an important role in structuring nutrient regimes within and between ecosystems. When animals undergo repetitive, aggregating behavior through time, they can create nutrient hotspots where rates of biogeochemical activity are higher than those found in the surrounding environment. In turn, these hotspots can influence ecosystem processes and community structure. We examined the potential for reef fishes from the family Haemulidae (grunts) to create nutrient hotspots and the potential impact of these hotspots on reef communities. To do so, we tracked the schooling locations of diurnally migrating grunts, which shelter at reef sites during the day but forage off reef each night, and measured the impact of these fish schools on benthic communities. We found that grunt schools showed a high degree of site fidelity, repeatedly returning to the same coral heads. These aggregations created nutrient hotspots around coral heads where nitrogen and phosphorus delivery was roughly 10 and 7 times the respective rates of delivery to structurally similar sites that lacked schools of these fishes. In turn, grazing rates of herbivorous fishes at grunt-derived hotspots were approximately 3 times those of sites where grunts were rare. These differences in nutrient delivery and grazing led to distinct benthic communities with higher cover of crustose coralline algae and less total algal abundance at grunt aggregation sites. Importantly, coral growth was roughly 1.5 times greater at grunt hotspots, likely due to the important nutrient subsidy. Our results suggest that schooling reef fish and their nutrient subsidies play an important role in mediating community structure on coral reefs and that overfishing may have important negative consequences on ecosystem functions. As such, management strategies must consider mesopredatory fishes in addition to current protection often offered to herbivores and top-tier predators. Furthermore, our results suggest that

Population Demographic History Can Cause the Appearance of Recombination Hotspots

Science.gov (United States)

Johnston, Henry R.; Cutler, David J.

2012-01-01

Although the prevailing view among geneticists suggests that recombination hotspots exist ubiquitously across the human genome, there is only limited experimental evidence from a few genomic regions to support the generality of this claim. A small number of true recombination hotspots are well supported experimentally, but the vast majority of hotspots have been identified on the basis of population genetic inferences from the patterns of linkage disequilibrium (LD) seen in the human population. These inferences are made assuming a particular model of human history, and one of the assumptions of that model is that the effective population size of humans has remained constant throughout our history. Our results show that relaxation of the constant population size assumption can create LD and variation patterns that are qualitatively and quantitatively similar to human populations without any need to invoke localized hotspots of recombination. In other words, apparent recombination hotspots could be an artifact of variable population size over time. Several lines of evidence suggest that the vast majority of hotspots identified on the basis of LD information are unlikely to have elevated recombination rates. PMID:22560089

Collimation of extragalactic jets: evidence from hotspots

International Nuclear Information System (INIS)

Banhatti, D.G.

1984-01-01

A linear relation with slope near unity is found between the logarithms of the hotspot size perpendicular to the source major axis and the distance from the core for 14 compact and/ or intense hotspots selected from a sample of 31 quasars having the largest angular sizes at various redshifts, as observed at 4.87 GHz with sub-arcsec resolution. A slope significantly less than 1 implies that the jet feeding the hotspot is laterally confined by the intergalactic medium, whereas a slope of 1 does not distinguish between a laterally confined jet and a free jet. The relation is found to have a slope near 1 implying a 0deg.1 jet confined within a cone of half-angle 15deg to 20deg or a 1deg-wide free jet. (author)

Anthropogenic influences on shoreline and nearshore evolution in the San Francisco Bay coastal system

Science.gov (United States)

Dallas, K.L.; Barnard, P.L.

2011-01-01

Analysis of four historical bathymetric surveys over a 132-year period has revealed significant changes to the morphology of the San Francisco Bar, an ebb-tidal delta at the mouth of San Francisco Bay estuary. From 1873 to 2005 the San Francisco Bar vertically-eroded an average of 80 cm over a 125 km2 area, which equates to a total volume loss of 100 ± 52 million m3 of fine- to coarse-grained sand. Comparison of the surveys indicates the entire ebb-tidal delta contracted radially, with the crest moving landward an average of 1 km. Long-term erosion of the ebb-tidal delta is hypothesized to be due to a reduction in the tidal prism of San Francisco Bay and a decrease in coastal sediment supply, both as a result of anthropogenic activities. Prior research indicates that the tidal prism of the estuary was reduced by 9% from filling, diking, and sedimentation. Compilation of historical records dating back to 1900 reveals that a minimum of 200 million m3 of sediment has been permanently removed from the San Francisco Bay coastal system through dredging, aggregate mining, and borrow pit mining. Of this total, ~54 million m3 of sand-sized or coarser sediment was removed from central San Francisco Bay. With grain sizes comparable to the ebb-tidal delta, and its direct connection to the bay mouth, removal of sediments from central San Francisco Bay may limit the sand supply to the delta and open coast beaches. SWAN wave modeling illustrates that changes to the morphology of the San Francisco Bar have altered the alongshore wave energy distribution at adjacent Ocean Beach, and thus may be a significant factor in a persistent beach erosion ‘hot spot’ occurring in the area. Shoreline change analyses show that the sandy shoreline in the shadow of the ebb-tidal delta experienced long-term (1850s/1890s to 2002) and short-term (1960s/1980s to 2002) accretion while the adjacent sandy shoreline exposed to open-ocean waves experienced long-term and short-term erosion. Therefore

Forecasting Hotspots-A Predictive Analytics Approach.

Science.gov (United States)

Maciejewski, R; Hafen, R; Rudolph, S; Larew, S G; Mitchell, M A; Cleveland, W S; Ebert, D S

2011-04-01

Current visual analytics systems provide users with the means to explore trends in their data. Linked views and interactive displays provide insight into correlations among people, events, and places in space and time. Analysts search for events of interest through statistical tools linked to visual displays, drill down into the data, and form hypotheses based upon the available information. However, current systems stop short of predicting events. In spatiotemporal data, analysts are searching for regions of space and time with unusually high incidences of events (hotspots). In the cases where hotspots are found, analysts would like to predict how these regions may grow in order to plan resource allocation and preventative measures. Furthermore, analysts would also like to predict where future hotspots may occur. To facilitate such forecasting, we have created a predictive visual analytics toolkit that provides analysts with linked spatiotemporal and statistical analytic views. Our system models spatiotemporal events through the combination of kernel density estimation for event distribution and seasonal trend decomposition by loess smoothing for temporal predictions. We provide analysts with estimates of error in our modeling, along with spatial and temporal alerts to indicate the occurrence of statistically significant hotspots. Spatial data are distributed based on a modeling of previous event locations, thereby maintaining a temporal coherence with past events. Such tools allow analysts to perform real-time hypothesis testing, plan intervention strategies, and allocate resources to correspond to perceived threats.

Evaluating Temporal Consistency in Marine Biodiversity Hotspots

OpenAIRE

Piacenza, Susan E.; Thurman, Lindsey L.; Barner, Allison K.; Benkwitt, Cassandra E.; Boersma, Kate S.; Cerny-Chipman, Elizabeth B.; Ingeman, Kurt E.; Kindinger, Tye L.; Lindsley, Amy J.; Nelson, Jake; Reimer, Jessica N.; Rowe, Jennifer C.; Shen, Chenchen; Thompson, Kevin A.; Heppell, Selina S.

2015-01-01

With the ongoing crisis of biodiversity loss and limited resources for conservation, the concept of biodiversity hotspots has been useful in determining conservation priority areas. However, there has been limited research into how temporal variability in biodiversity may influence conservation area prioritization. To address this information gap, we present an approach to evaluate the temporal consistency of biodiversity hotspots in large marine ecosystems. Using a large scale, public monito...

Overlooked mountain rock pools in deserts are critical local hotspots of biodiversity.

Science.gov (United States)

Vale, Cândida Gomes; Pimm, Stuart L; Brito, José Carlos

2015-01-01

The world is undergoing exceptional biodiversity loss. Most conservation efforts target biodiversity hotspots at large scales. Such approach overlooks small-sized local hotspots, which may be rich in endemic and highly threatened species. We explore the importance of mountain rock pools (gueltas) as local biodiversity hotspots in the Sahara-Sahel. Specifically, we considered how many vertebrates (total and endemics) use gueltas, what factors predict species richness, and which gueltas are of most priority for conservation. We expected to provide management recommendations, improve local biodiversity conservation, and simultaneously contribute with a framework for future enhancement of local communities' economy. The identification of local hotspots of biodiversity is important for revaluating global conservation priorities. We quantified the number of vertebrate species from each taxonomic group and endemics present in 69 gueltas in Mauritania, then compared these with species present in a surrounding area and recorded in the country. We evaluated the predictors of species number's present in each guelta through a multiple regression model. We ranked gueltas by their priority for conservation taking into account the percentage of endemics and threats to each guelta. Within a mere aggregate extent of 43 ha, gueltas hold about 32% and 78% of the total taxa analysed and endemics of Mauritania, respectively. The number of species present in each guelta increased with the primary productivity and area of gueltas and occurrence of permanent water. Droughts and human activities threaten gueltas, while 64% of them are currently unprotected. Gueltas are crucial for local biodiversity conservation and human activities. They require urgent management plans in Mauritania's mountains. They could provide refugia under climate change being important for long-term conservation of Sahara-Sahel biodiversity. Given their disproportional importance in relation to their size, they are

15 CFR 923.25 - Shoreline erosion/mitigation planning.

Science.gov (United States)

2010-01-01

... 15 Commerce and Foreign Trade 3 2010-01-01 2010-01-01 false Shoreline erosion/mitigation planning... erosion/mitigation planning. (a) The management program must include a planning process for assessing the... planning process may be within the broader context of coastal hazard mitigation planning. (b) The basic...

COREXIT 9580 shoreline cleaner: Development, application, and status

International Nuclear Information System (INIS)

Canevari, G.P.; Fiocco, R.J.; Lessard, R.R.; Fingas, M.

1995-01-01

This paper will describe research on chemical beach cleaners for treatment of oiled shorelines that was initiated in support of the cleaning activities in Prince William Sound (PWS) following the Valdez oil spill in March 1989. The concept for using beach cleaners for shoreline cleanup is to apply a pre-soak to the weathered crude oil on shore and then flush with sea water to wash the oil into a boomed area for subsequent recovery. Criteria imposed on the use of chemical beach cleaners for the cleanup of the Valdez spill were: (1) effective rock cleaning agents should have very little or no toxicity to marine and terrestrial life, (2) there should be no dispersion of the oil washed from the shoreline into the water column; oil was to be recovered by techniques such as skimming or sorbents, and (3) the agents should be on the EPA National Contingency Plan (NCP) list. A laboratory-scale rock washing test was developed to measure cleaner effectiveness and dispersion. A large number of commercially available formulated products were evaluated, as well as development formulations. The commercial products included all of the available NCP-listed products which could function as cleaners. None of the commercial products completely satisfied all the requirements established by the agencies for beach cleaning. However, a new formula, called COREXIT 9580, consisting of two surfactants and a solvent was developed. It exhibited low fish toxicity, low dispersancy and effective rock cleaning capability. The paper reviews the laboratory and field testing to explore the potential use of the COREXIT 9580 to save and restore oiled vegetation

Polarization observations of DA240: structure of a hotspot

International Nuclear Information System (INIS)

Tsien, S.C.

1982-01-01

We present observations of the large-scale structure of the giant radio galaxy DA 240 at 0.15 and 1.4 GHz and high-resolution observations of the hotspot in its eastern lobe at 2.7 and 5.0 GHz. It is shown that the large-scale structure of DA 240 at 0.15 GHz is closely similar to that at 1.4 GHz. An age of about 4 x 10 7 yr is estimated from the spectral index. The hotspot contains a compact component of approximately 2 in size, and is strongly polarized, up to 50 to 60 per cent in its south-east region. The projected magnetic field in the hotspot runs nearly parallel to the two main elongated subcomponents. The thermal electron density in the hotspot is estimated to be -5 cm -3 . (author)

HOTSPOT Health Physics codes for the PC

Energy Technology Data Exchange (ETDEWEB)

Homann, S.G.

1994-03-01

The HOTSPOT Health Physics codes were created to provide Health Physics personnel with a fast, field-portable calculation tool for evaluating accidents involving radioactive materials. HOTSPOT codes are a first-order approximation of the radiation effects associated with the atmospheric release of radioactive materials. HOTSPOT programs are reasonably accurate for a timely initial assessment. More importantly, HOTSPOT codes produce a consistent output for the same input assumptions and minimize the probability of errors associated with reading a graph incorrectly or scaling a universal nomogram during an emergency. The HOTSPOT codes are designed for short-term (less than 24 hours) release durations. Users requiring radiological release consequences for release scenarios over a longer time period, e.g., annual windrose data, are directed to such long-term models as CAPP88-PC (Parks, 1992). Users requiring more sophisticated modeling capabilities, e.g., complex terrain; multi-location real-time wind field data; etc., are directed to such capabilities as the Department of Energy`s ARAC computer codes (Sullivan, 1993). Four general programs -- Plume, Explosion, Fire, and Resuspension -- calculate a downwind assessment following the release of radioactive material resulting from a continuous or puff release, explosive release, fuel fire, or an area contamination event. Other programs deal with the release of plutonium, uranium, and tritium to expedite an initial assessment of accidents involving nuclear weapons. Additional programs estimate the dose commitment from the inhalation of any one of the radionuclides listed in the database of radionuclides; calibrate a radiation survey instrument for ground-survey measurements; and screen plutonium uptake in the lung (see FIDLER Calibration and LUNG Screening sections).

HOTSPOT Health Physics codes for the PC

International Nuclear Information System (INIS)

Homann, S.G.

1994-03-01

The HOTSPOT Health Physics codes were created to provide Health Physics personnel with a fast, field-portable calculation tool for evaluating accidents involving radioactive materials. HOTSPOT codes are a first-order approximation of the radiation effects associated with the atmospheric release of radioactive materials. HOTSPOT programs are reasonably accurate for a timely initial assessment. More importantly, HOTSPOT codes produce a consistent output for the same input assumptions and minimize the probability of errors associated with reading a graph incorrectly or scaling a universal nomogram during an emergency. The HOTSPOT codes are designed for short-term (less than 24 hours) release durations. Users requiring radiological release consequences for release scenarios over a longer time period, e.g., annual windrose data, are directed to such long-term models as CAPP88-PC (Parks, 1992). Users requiring more sophisticated modeling capabilities, e.g., complex terrain; multi-location real-time wind field data; etc., are directed to such capabilities as the Department of Energy's ARAC computer codes (Sullivan, 1993). Four general programs -- Plume, Explosion, Fire, and Resuspension -- calculate a downwind assessment following the release of radioactive material resulting from a continuous or puff release, explosive release, fuel fire, or an area contamination event. Other programs deal with the release of plutonium, uranium, and tritium to expedite an initial assessment of accidents involving nuclear weapons. Additional programs estimate the dose commitment from the inhalation of any one of the radionuclides listed in the database of radionuclides; calibrate a radiation survey instrument for ground-survey measurements; and screen plutonium uptake in the lung (see FIDLER Calibration and LUNG Screening sections)

Phonon emission from self-heating hotspots into He II

International Nuclear Information System (INIS)

Schulze, H.-J.; Keck, K.

1985-01-01

Self-heating effects in superconducting films or whiskers can produce several hotspots distributed along the sample in the transition range between its superconducting and completely normal state. To obtain information about the temperature distribution along the film in this transition range and the emission of phonons from hotspots into the helium bath, we moved thin carbon filaments close to the film surfaces. By means of the data and the current-voltage characteristics of the films conclusions can be drawn about the number and the size of the hotspots. (author)

Quantile-Based Permutation Thresholds for Quantitative Trait Loci Hotspots

NARCIS (Netherlands)

Neto, Elias Chaibub; Keller, Mark P.; Broman, Andrew F.; Attie, Alan D.; Jansen, Ritsert C.; Broman, Karl W.; Yandell, Brian S.; Borevitz, J.

Quantitative trait loci (QTL) hotspots (genomic locations affecting many traits) are a common feature in genetical genomics studies and are biologically interesting since they may harbor critical regulators. Therefore, statistical procedures to assess the significance of hotspots are of key

PRDM9 variation strongly influences recombination hot-spot activity and meiotic instability in humans.

Science.gov (United States)

Berg, Ingrid L; Neumann, Rita; Lam, Kwan-Wood G; Sarbajna, Shriparna; Odenthal-Hesse, Linda; May, Celia A; Jeffreys, Alec J

2010-10-01

PRDM9 has recently been identified as a likely trans regulator of meiotic recombination hot spots in humans and mice. PRDM9 contains a zinc finger array that, in humans, can recognize a short sequence motif associated with hot spots, with binding to this motif possibly triggering hot-spot activity via chromatin remodeling. We now report that human genetic variation at the PRDM9 locus has a strong effect on sperm hot-spot activity, even at hot spots lacking the sequence motif. Subtle changes within the zinc finger array can create hot-spot nonactivating or enhancing variants and can even trigger the appearance of a new hot spot, suggesting that PRDM9 is a major global regulator of hot spots in humans. Variation at the PRDM9 locus also influences aspects of genome instability-specifically, a megabase-scale rearrangement underlying two genomic disorders as well as minisatellite instability-implicating PRDM9 as a risk factor for some pathological genome rearrangements.

Hotspots of soil N2O emission enhanced through water absorption by plant residue

Energy Technology Data Exchange (ETDEWEB)

Kravchenko, A.N.; Toosi, E.R.; Guber, A.K.; Ostrom, N.E.; Yu, J.; Azeem, K.; Rivers, M.L.; Robertson , G.P. (UAF Pakistan); (UC); (Hubei); (MSU)

2017-06-05

N2O is a highly potent greenhouse gas and arable soils represent its major anthropogenic source. Field-scale assessments and predictions of soil N2O emission remain uncertain and imprecise due to the episodic and microscale nature of microbial N2O production, most of which occurs within very small discrete soil volumes. Such hotspots of N2O production are often associated with decomposing plant residue. Here we quantify physical and hydrological soil characteristics that lead to strikingly accelerated N2O emissions in plant residue-induced hotspots. Results reveal a mechanism for microscale N2O emissions: water absorption by plant residue that creates unique micro-environmental conditions, markedly different from those of the bulk soil. Moisture levels within plant residue exceeded those of bulk soil by 4–10-fold and led to accelerated N2O production via microbial denitrification. The presence of large (Ø >35 μm) pores was a prerequisite for maximized hotspot N2O production and for subsequent diffusion to the atmosphere. Understanding and modelling hotspot microscale physical and hydrologic characteristics is a promising route to predict N2O emissions and thus to develop effective mitigation strategies and estimate global fluxes in a changing environment.

Role of endothelial permeability hotspots and endothelial mitosis in determining age-related patterns of macromolecule uptake by the rabbit aortic wall near branch points.

Science.gov (United States)

Chooi, K Yean; Comerford, Andrew; Cremers, Stephanie J; Weinberg, Peter D

2016-07-01

Transport of macromolecules between plasma and the arterial wall plays a key role in atherogenesis. Scattered hotspots of elevated endothelial permeability to macromolecules occur in the aorta; a fraction of them are associated with dividing cells. Hotspots occur particularly frequently downstream of branch points, where lesions develop in young rabbits and children. However, the pattern of lesions varies with age, and can be explained by similar variation in the pattern of macromolecule uptake. We investigated whether patterns of hotspots and mitosis also change with age. Evans' Blue dye-labeled albumin was injected intravenously into immature or mature rabbits and its subsequent distribution in the aortic wall around intercostal branch ostia examined by confocal microscopy and automated image analysis. Mitosis was detected by immunofluorescence after adding 5-bromo-2-deoxiuridine to drinking water. Hotspots were most frequent downstream of branches in immature rabbits, but a novel distribution was observed in mature rabbits. Neither pattern was explained by mitosis. Hotspot uptake correlated spatially with the much greater non-hotspot uptake (p hotspots were considered. The pattern of hotspots changes with age. The data are consistent with there being a continuum of local permeabilities rather than two distinct mechanisms. The distribution of the dye, which binds to elastin and collagen, was similar to that of non-binding tracers and to lesions apart from a paucity at the lateral margins of branches that can be explained by lower levels of fibrous proteins in those regions. Copyright © 2016. Published by Elsevier Ireland Ltd.

A suggested classification and explanation for hotspots in some powerful radio sources

International Nuclear Information System (INIS)

Kronberg, P.P.; Jones, T.W.

1982-01-01

High resolution (1''→0.1') maps of the outer complexes of some ''well formed'' powerful radio sources suggest that we can now distinguish two physically distinct types of outer hotspots. The authors denote them as type ''A'' and ''B'' and describe them as follows: Type A hotspots, occur at the outer leading edge, and have a cusp-like, or otherwise elongated shape. This strongly suggests that their shape and energy density are determined by the ram-pressure interaction between the end of a beam or momentum flux ''pipeline'', and the ambient i.g.m. Type B hotspots generally lie off the A hotspot-galaxy/QSO axis, and are also behind the Type A hotspots. In at least some cases, they are compact and have a higher minimum energy density than the outer, Type A hotspots. (Auth.)

Effects of Demographic History on the Detection of Recombination Hotspots from Linkage Disequilibrium.

Science.gov (United States)

Dapper, Amy L; Payseur, Bret A

2018-02-01

In some species, meiotic recombination is concentrated in small genomic regions. These "recombination hotspots" leave signatures in fine-scale patterns of linkage disequilibrium, raising the prospect that the genomic landscape of hotspots can be characterized from sequence variation. This approach has led to the inference that hotspots evolve rapidly in some species, but are conserved in others. Historic demographic events, such as population bottlenecks, are known to affect patterns of linkage disequilibrium across the genome, violating population genetic assumptions of this approach. Although such events are prevalent, demographic history is generally ignored when making inferences about the evolution of recombination hotspots. To determine the effect of demography on the detection of recombination hotspots, we use the coalescent to simulate haplotypes with a known recombination landscape. We measure the ability of popular linkage disequilibrium-based programs to detect hotspots across a range of demographic histories, including population bottlenecks, hidden population structure, population expansions, and population contractions. We find that demographic events have the potential to greatly reduce the power and increase the false positive rate of hotspot discovery. Neither the power nor the false positive rate of hotspot detection can be predicted without also knowing the demographic history of the sample. Our results suggest that ignoring demographic history likely overestimates the power to detect hotspots and therefore underestimates the degree of hotspot sharing between species. We suggest strategies for incorporating demographic history into population genetic inferences about recombination hotspots. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Episodic swell growth inferred from variable uplift of the Cape Verde hotspot islands

Science.gov (United States)

Ramalho, R.; Helffrich, G.; Cosca, M.; Vance, D.; Hoffmann, D.; Schmidt, D.N.

2010-01-01

On the Beagle voyage, Charles Darwin first noted the creation and subsidence of ocean islands, establishing in geology's infancy that island freeboard changes with time. Hotspot ocean islands have an obvious mechanism for freeboard change through the growth of the bathymetric anomaly, or swell, on which the islands rest. Models for swell development indicate that flexural, thermal or dynamic pressure contributions, as well as spreading of melt residue from the hotspot, can all contribute to island uplift. Here we test various models for swell development using the uplift histories for the islands of the Cape Verde hotspot, derived from isotopic dating of marine terraces and subaerial to submarine lava-flow morphologies. The island uplift histories, in conjunction with inter-island spacing, uplift rate and timing differences, rule out flexural, thermal or dynamic pressure contributions. We also find that uplift cannot be reconciled with models that advocate the spreading of melt residue in swell development unless swell growth is episodic. Instead, we infer from the uplift histories that two processes have acted to raise the islands during the past 6 Myr. During an initial phase, mantle processes acted to build the swell. Subsequently, magmatic intrusions at the island edifice caused 350 m of local uplift at the scale of individual islands. Finally, swell-wide uplift contributed a further 100 m of surface rise.

Comparison of two shoreline assessment programs conducted for the Exxon Valdez oil spill

International Nuclear Information System (INIS)

Harner, E.J.; Gilfillan, E.S.

1995-01-01

Two large shoreline assessment studies conducted in 1990 in Prince William Sound, Alaska, after the Exxon Valdez oil spill used different design strategies to determine the impact of oiling on shoreline biota. One of the studies, the Coastal Habitat Injury Assessment (CHIA) conducted for the Exxon Valdez Oil Spill Council, used matched pairs of sites, normal population distributions for biota, and meta-analysis. The power of the CHIA study to detect oiling impacts depends on being able to identify and select appropriate pairs of sites for comparison. The CHIA study also increased the oiling signal by focusing on moderate to heavily oiled sites. The Shoreline Ecology Program (SEP), conducted for Exxon, used a stratified-random-sampling study design, normal and non-normal population distributions and covariates. The SEP study was able to detect oiling impacts by using a sufficient number of sites and widely spaced transects

Was sind Biodiversity Hotspots - global, regional, lokal?

OpenAIRE

Hobohm, Carsten

2005-01-01

Das Konzept der Biodiversity Hotspots, das Ende der 1980er Jahre von Norman Myers entworfen wurde, gehört derzeit zu den wichtigen forschungsleitenden Ansätzen globaler Naturschutzstrategien. In der vorliegenden Arbeit geht es in erster Linie um die Frage, ob und inwiefern dieses Konzept auf die regionale und lokale Dimension Europas übertragen werden kann. Es wird ein Vorschlag unterbreitet, wie europäische Biodiversity Hotspots definiert und identifiziert werden können. Bei der Erforschung ...

Distribution, congruence, and hotspots of higher plants in China.

Science.gov (United States)

Zhao, Lina; Li, Jinya; Liu, Huiyuan; Qin, Haining

2016-01-11

Identifying biodiversity hotspots has become a central issue in setting up priority protection areas, especially as financial resources for biological diversity conservation are limited. Taking China's Higher Plants Red List (CHPRL), including Bryophytes, Ferns, Gymnosperms, Angiosperms, as the data source, we analyzed the geographic patterns of species richness, endemism, and endangerment via data processing at a fine grid-scale with an average edge length of 30 km based on three aspects of richness information: species richness, endemic species richness, and threatened species richness. We sought to test the accuracy of hotspots used in identifying conservation priorities with regard to higher plants. Next, we tested the congruence of the three aspects and made a comparison of the similarities and differences between the hotspots described in this paper and those in previous studies. We found that over 90% of threatened species in China are concentrated. While a high spatial congruence is observed among the three measures, there is a low congruence between two different sets of hotspots. Our results suggest that biodiversity information should be considered when identifying biological hotspots. Other factors, such as scales, should be included as well to develop biodiversity conservation plans in accordance with the region's specific conditions.

Shoreline oiling conditions in Prince William Sound following the Exxon Valdez oil spill

International Nuclear Information System (INIS)

Neff, J.M.; Owens, E.H.; Stoker, S.W.; McCormick, D.M.

1995-01-01

Following the Exxon Valdez oil spill of March 24, 1989, in Prince William Sound, Alaska, Exxon conducted comprehensive, systematic shoreline surveys in cooperation with federal and state authorities to obtain information on the distribution and magnitude of shoreline oiling and to identify natural and cultural resources requiring special protection. Similar joint surveys were performed during the springs of 1990, 1991, and 1992 on all Prince william Sound and Gulf of Alaska shorelines that were suspected of having remnants of weathered oil and that would benefit from further cleanup. In the springs of 1990, 1991, and 1992, isolated pockets of subsurface oil were found, chiefly in small scattered zones in coarse cobble/boulder sediments in the upper intertidal or supratidal zones. In 1991, about one-third of the subdivisions in Prince William Sound with surface oil also contained some subsurface oil. The areal extent of this subsurface oil declined by nearly 70% between 1991 and 1992, from about 37,000 m 2 to about 12,000 m 2 . Moreover, where subsurface oil remained in 1992, it was present in lesser amounts. Rates of oil removal were greatest on coastal sections treated early in the spring and summer of 1989. Where shoreline treatment was delayed, the subsequent rate of removal of oil from the shore by natural processes was slower. 27 refs., 10 figs., 3 tabs

A Method for Improving Hotspot Directional Signatures in BRDF Models Used for MODIS

Science.gov (United States)

Jiao, Ziti; Schaaf, Crystal B.; Dong, Yadong; Roman, Miguel; Hill, Michael J.; Chen, Jing M.; Wang, Zhuosen; Zhang, Hu; Saenz, Edward; Poudyal, Rajesh;

Hotspot relaxation dynamics in a current-carrying superconductor

Science.gov (United States)

Marsili, F.; Stevens, M. J.; Kozorezov, A.; Verma, V. B.; Lambert, Colin; Stern, J. A.; Horansky, R. D.; Dyer, S.; Duff, S.; Pappas, D. P.; Lita, A. E.; Shaw, M. D.; Mirin, R. P.; Nam, S. W.

2016-03-01

We experimentally studied the dynamics of optically excited hotspots in current-carrying WSi superconducting nanowires as a function of bias current, bath temperature, and excitation wavelength. We observed that the hotspot relaxation time depends on bias current, temperature, and wavelength. We explained this effect with a model based on quasiparticle recombination, which provides insight into the quasiparticle dynamics of superconductors.

Prdm9 controls activation of mammalian recombination hotspots.

Science.gov (United States)

Parvanov, Emil D; Petkov, Petko M; Paigen, Kenneth

2010-02-12

Mammalian meiotic recombination, which preferentially occurs at specialized sites called hotspots, ensures the orderly segregation of meiotic chromosomes and creates genetic variation among offspring. A locus on mouse chromosome 17, which controls activation of recombination at multiple distant hotspots, has been mapped within a 181-kilobase interval, three of whose genes can be eliminated as candidates. The remaining gene, Prdm9, codes for a zinc finger containing histone H3K4 trimethylase that is expressed in early meiosis and whose deficiency results in sterility in both sexes. Mus musculus exhibits five alleles of Prdm9; human populations exhibit two predominant alleles and multiple minor alleles. The identification of Prdm9 as a protein regulating mammalian recombination hotspots initiates molecular studies of this important biological control system.

Breaking and Moving Hotspots in a Large Grain Nb Cavity with a Laser Beam

International Nuclear Information System (INIS)

Ciovati, G.; Cheng, G.; Flood, R. J.; Jordan, K.; Kneisel, P.; Morrone, M. L.; Turlington, L.; Wilson, K. M.; Zhang, S.; Anlage, S. M.; Gurevich, A. V.; Nemes, G.; Baldwin, C.

2011-01-01

Magnetic vortices pinned near the inner surface of SRF Nb cavities are a possible source of RF hotspots, frequently observed by temperature mapping of the cavities outer surface at RF surface magnetic fields of about 100 mT. Theoretically, we expect that the thermal gradient provided by a 10 W green laser shining on the inner cavity surface at the RF hotspot locations can move pinned vortices to different pinning locations. The experimental apparatus to send the beam onto the inner surface of a photoinjector-type large-grain Nb cavity is described. Preliminary results on the changes in thermal maps observed after applying the laser heating are also reported

The Manihiki Plateau—a key to missing hotspot tracks?

Science.gov (United States)

Pietsch, R.; Uenzelmann-Neben, G.

2016-08-01

A Neogene magmatic reactivation of the Manihiki Plateau, a large igneous province (LIP) in the central Pacific, is studied using seismic reflection data. Igneous diapirs have been identified exclusively within a narrow WNW-ESE striking corridor in the southern High Plateau (HP), which is parallel to the Neogene Pacific Plate motion and overlaps with an extrapolation of the Society Islands Hotspot (SIH) path. The igneous diapirs are characterized by a narrow width (>5 km), penetration of the Neogene sediments, and they become progressively younger towards the East (23-10 Ma). The magmatic source appears to be of small lateral extent, which leads to the conclusion that the diapirs represent Neogene hotspot volcanism within a LIP, and thus may be an older, previously unknown extension of the SIH track (>4.5 Ma). Comparing hotspot volcanism within oceanic and continental lithosphere, we further conclude that hotspot volcanism within LIP crust has similarities to tectonically faulted continental crust.

Defining Persistent Hotspots: Areas That Fail to Decrease Meaningfully in Prevalence after Multiple Years of Mass Drug Administration with Praziquantel for Control of Schistosomiasis.

Science.gov (United States)

Kittur, Nupur; Binder, Sue; Campbell, Carl H; King, Charles H; Kinung'hi, Safari; Olsen, Annette; Magnussen, Pascal; Colley, Daniel G

2017-12-01

Preventive chemotherapy with praziquantel for schistosomiasis morbidity control is commonly done by mass drug administration (MDA). MDA regimen is usually based on prevalence in a given area, and effectiveness is evaluated by decreases in prevalence and/or intensity of infection after several years of implementation. Multiple studies and programs now find that even within well-implemented, multiyear, annual MDA programs there often remain locations that do not decline in prevalence and/or intensity to expected levels. We term such locations "persistent hotspots." To study and address persistent hotspots, investigators and neglected tropical disease (NTD) program managers need to define them based on changes in prevalence and/or intensity. But how should the data be analyzed to define a persistent hotspot? We have analyzed a dataset from an operational research study in western Tanzania after three annual MDAs using four different approaches to define persistent hotspots. The four approaches are 1) absolute percent change in prevalence; 2) percent change in prevalence; 3) change in World Health Organization guideline categories; 4) change (absolute or percent) in both prevalence and intensity. We compare and contrast the outcomes of these analyses. Our intent is to show how the same dataset yields different numbers of persistent hotspots depending on the approach used to define them. We suggest that investigators and NTD program managers use the approach most suited for their study or program, but whichever approach is used, it should be clearly stated so that comparisons can be made within and between studies and programs.

Radiation dates of holocene shorelines in Peninsula Malaysia

International Nuclear Information System (INIS)

Tjia, H.D.; Kigoshi, K.

1977-01-01

Fifteen newly determined radiocarbon dates indicate the presence of former shorelines up to 3 meters above present high tide level in the tectonically stable Peninsula of Malaysia. The sea level indicators consist of oysters in growth position (9 samples), molluscs in beach deposits (2), corals in growth position (3), and beachrock (1). In the Peninsula living oysters occur up to or slightly above high tide, modern beach deposits may occur as high as 1.5 meters above high tide, and corals live up to low tide level. The literature shows that high tide, and corals live up to low tide level. The literature shows that beachrock marks intertidal zones. Combined with seven previously published ages of raised shorelines in the region, strong evidence is presented for one or more high Holocene, eustatic sea level stands in the continental part of Southeast Asia. Periods of high sea levels occur between 2500 and 2900 yr BP, and between 4200 and 5700 yr BP. There is also some indication of high sea level between 8300 and 9500 yr BP. (author)

The ecology, status, and conservation of marine and shoreline birds on the west coast of Vancouver Island

International Nuclear Information System (INIS)

Vermeer, K.; Butler, R.W.; Morgan, K.H.

1992-01-01

A symposium was held to combine various disciplines to provide a review of current knowledge about the marine biology of the west coast of Vancouver Island, with a particular emphasis on birds. Papers were presented on the physical and biological environment of the study region, the population and breeding ecology of marine and shoreline birds, the distribution of marine and shoreline birds at sea, the effects of oil pollution on the bird population, and the conservation of marine and shoreline birds. Separate abstracts have been prepared for two papers from this symposium

Detecting Recombination Hotspots from Patterns of Linkage Disequilibrium.

Science.gov (United States)

Wall, Jeffrey D; Stevison, Laurie S

2016-08-09

With recent advances in DNA sequencing technologies, it has become increasingly easy to use whole-genome sequencing of unrelated individuals to assay patterns of linkage disequilibrium (LD) across the genome. One type of analysis that is commonly performed is to estimate local recombination rates and identify recombination hotspots from patterns of LD. One method for detecting recombination hotspots, LDhot, has been used in a handful of species to further our understanding of the basic biology of recombination. For the most part, the effectiveness of this method (e.g., power and false positive rate) is unknown. In this study, we run extensive simulations to compare the effectiveness of three different implementations of LDhot. We find large differences in the power and false positive rates of these different approaches, as well as a strong sensitivity to the window size used (with smaller window sizes leading to more accurate estimation of hotspot locations). We also compared our LDhot simulation results with comparable simulation results obtained from a Bayesian maximum-likelihood approach for identifying hotspots. Surprisingly, we found that the latter computationally intensive approach had substantially lower power over the parameter values considered in our simulations. Copyright © 2016 Wall and Stevison.

Diagnostic for determining the mix in inertial confinement fusion capsule hotspot

Energy Technology Data Exchange (ETDEWEB)

He, Shibei; Ding, Yongkun, E-mail: ding-yk@vip.sina.com; Miao, Wenyong; Zhang, Xing; Tu, Shaoyong; Yuan, Yongteng; Pu, Yudong; Yan, Ji; Wei, Minxi; Yin, Chuansheng [Research Center of Laser Fusion, China Academy of Engineering Physics, Mianyang 621900 (China)

2016-07-15

A diagnostic is developed for determining the hotspot mix in inertial confinement fusion experiments. A multi-channel pinhole camera measures Bremsstrahlung emissions from implosion capsules ranging from 6 keV to 30 keV and records an image of the hotspot. Meanwhile, a planar crystal spectrometer measures Ar line emissions used to deduce the electron density of the hotspot. An X-ray streaked camera records the burn duration. With the Bremsstrahlung spectrum, electron density, hotspot volume, and burn duration, the mix quantity is determined by solving a pair of linear equations. This inferred mix amount has an uncertainty due to the uncertainty of the electron density, but with the help of the measured neutron product, the most likely mix quantity value can be determined. This technique is applied to experimental images to infer the quantity of CH ablator mix into the hotspot.

Diagnostic for determining the mix in inertial confinement fusion capsule hotspot

International Nuclear Information System (INIS)

He, Shibei; Ding, Yongkun; Miao, Wenyong; Zhang, Xing; Tu, Shaoyong; Yuan, Yongteng; Pu, Yudong; Yan, Ji; Wei, Minxi; Yin, Chuansheng

2016-01-01

A diagnostic is developed for determining the hotspot mix in inertial confinement fusion experiments. A multi-channel pinhole camera measures Bremsstrahlung emissions from implosion capsules ranging from 6 keV to 30 keV and records an image of the hotspot. Meanwhile, a planar crystal spectrometer measures Ar line emissions used to deduce the electron density of the hotspot. An X-ray streaked camera records the burn duration. With the Bremsstrahlung spectrum, electron density, hotspot volume, and burn duration, the mix quantity is determined by solving a pair of linear equations. This inferred mix amount has an uncertainty due to the uncertainty of the electron density, but with the help of the measured neutron product, the most likely mix quantity value can be determined. This technique is applied to experimental images to infer the quantity of CH ablator mix into the hotspot.

Effect of climate change on morphology around a port

Science.gov (United States)

Bharathan Radhamma, R.; Deo, M. C.

2017-12-01

It is well known that with the construction of a port and harbour structure the natural shoreline gets interrupted and this disturbs the surrounding coastal morphology. Added to this concern is another one of recent origin, namely, the likely impact of climate change induced by global warming. The present work addresses this issue by describing a case study at New Mangalore Port situated along the west coast of India. The harbour was formed by constructing two breakwaters along either side of the port since the year 1975. We have first determined the rate of change of the shoreline surrounding the port using historic satellite imageries over a period of 36 years. Thereafter a numerical shoreline change model: LITPACK was used to do the same and it was forced by waves simulated over a period of past 36 years varying from 1979 to 2016 and future 36 years ranging from 2016 to 2052. The wave simulation was done with the help of numerical wave model: Mike21-SW which was driven by the wind from a regional climate model called CORDEX. This climate model was earlier run for a moderate global warming pathway called: RCP-4.5. The analysis of satellite imageries indicated that in the past the shoreline change varied from -1.69 m/year to 2.56 m/year with an uncertainty of ± 0.35 m/year and approximately half of the coastal stretch faced extensive erosion. It was found that the wind and waves at this region would intensify in future and also raise the probability of occurrence of high waves. As per the numerical shoreline modelling this would give rise to a much enhanced rate of erosion, namely -2.87 m/year to -3.62 m/year. This would call for a modified shoreline management strategy around the port area. The study highlights the importance of considering potential changes in wind and wave forcing because of the climate change in evaluating future rates of shoreline changes around a port and harbour structure.

Effects of shoreline erosion on infrastructure development along the ...

African Journals Online (AJOL)

... coastal environment and affected the socio-economic life of local populations, threatened cultural heritage and hindered coastal tourism development. This paper assessed the extent of shoreline recession and its effects on buildings and infrastructure along Ghana's coastline through a study of the Nkontompo Community ...

VT Biodiversity Project - Biological Hotspots

Data.gov (United States)

Vermont Center for Geographic Information — (Link to Metadata) This dataset is the result of an effort to map biological "hotspots" in Vermont based on the "element occurrences" in the Nongame and Natural...

Submarine canyons represent an essential habitat network for krill hotspots in a Large Marine Ecosystem.

Science.gov (United States)

Santora, Jarrod A; Zeno, Ramona; Dorman, Jeffrey G; Sydeman, William J

2018-05-15

Submarine canyon systems are ubiquitous features of marine ecosystems, known to support high levels of biodiversity. Canyons may be important to benthic-pelagic ecosystem coupling, but their role in concentrating plankton and structuring pelagic communities is not well known. We hypothesize that at the scale of a large marine ecosystem, canyons provide a critical habitat network, which maintain energy flow and trophic interactions. We evaluate canyon characteristics relative to the distribution and abundance of krill, critically important prey in the California Current Ecosystem. Using a geological database, we conducted a census of canyon locations, evaluated their dimensions, and quantified functional relationships with krill hotspots (i.e., sites of persistently elevated abundance) derived from hydro-acoustic surveys. We found that 76% of krill hotspots occurred within and adjacent to canyons. Most krill hotspots were associated with large shelf-incising canyons. Krill hotspots and canyon dimensions displayed similar coherence as a function of latitude and indicate a potential regional habitat network. The latitudinal migration of many fish, seabirds and mammals may be enhanced by using this canyon-krill network to maintain foraging opportunities. Biogeographic assessments and predictions of krill and krill-predator distributions under climate change may be improved by accounting for canyons in habitat models.

Re-evaluating the NO 2 hotspot over the South African Highveld

Directory of Open Access Journals (Sweden)

Alexandra S.M. Lourens

2012-10-01

Full Text Available Globally, numerous pollution hotspots have been identified using satellite-based instruments. One of these hotspots is the prominent NO2hotspot over the South African Highveld. The tropospheric NO2column density of this area is comparable to that observed for central and northern Europe, eastern North America and south-east Asia. The most well-known pollution source in this area is a large array of coal-fired power stations. Upon closer inspection, long-term means of satellite observations also show a smaller area, approximately 100 km west of the Highveld hotspot, with a seemingly less substantial NO2column density. This area correlates with the geographical location of the Johannesburg–Pretoria conurbation or megacity, one of the 40 largest metropolitan areas in the world. Ground-based measurements indicate that NO2concentrations in the megacity have diurnal peaks in the early morning and late afternoon, which coincide with peak traffic hours and domestic combustion. During these times, NO2concentrations in the megacity are higher than those in the Highveld hotspot. These diurnal NO2 peaks in the megacity have generally been overlooked by satellite observations because the satellites have fixed local overpass times that do not coincide with these peak periods. Consequently, the importance of NO2 over the megacity has been underestimated. We examined the diurnal cycles of NO2 ground-based measurements for the two areas – the megacity and the Highveld hotspot – and compared them with the satellite-based NO2 observations. Results show that the Highveld hotspot is accompanied by a second hotspot over the megacity, which is of significance for the more than 10 million people living in this megacity.

A Novel Approach for Identification and Ranking of Road Traffic Accident Hotspots

Directory of Open Access Journals (Sweden)

Zahran El-Said M.M.

2017-01-01

Full Text Available Road Traffic Accidents (RTA are known to be one of the main causes of fatalities worldwide. One usef ul approach to improve road safety is through the identification of RT A hotspots along a road, so they can be prioritised and treated. This paper introduces an approach based on Geographical Information System (GI S to identify and prioritise RTA hotspots along a road network using historical RTA data. One particular urban road in Brunei with a historically high rate of RT As, Jalan Gadong, was selected as a case study. Five years of historical RTA data were acquired from the relevant authorities and input into a GIS database. GI S analysis was then used to identify the spatial extension of the RT A hotspots. The RT A hotspots were ranked according to three different schemes: frequency, severity and socio-economic impact of RTAs. A composite ranking scheme was also developed to combine these schemes; this enabled the prioritisation and development of intervention and maintenance programmes of the identified RTA hotspots. A visualisation method of the RTA spatial distribution within each identified RTA hotspot was also developed to determine the most risky road stretches within each hotspot, which is important for treatment prioritisation when limited resources are available.

Warming increases hotspot areas of enzyme activity and shortens the duration of hot moments in the detritusphere

Science.gov (United States)

Ma, Xiaomin; Razavi, Bahar S.; Holz, Maire; Blagodatskaya, Evgenia; Kuzyakov, Yakov

2017-04-01

Temperature effects on enzyme kinetics and on the spatial distribution of microbial hotspots are important because of their potential feedback to climate change. We used direct zymography to study the spatial distributions of enzymes responsible for P (phosphatase), C (cellobiohydrolase) and N (leucine-aminopeptidase) cycles in the rhizosphere (living roots of maize) and detritusphere (7 and 14 days after cutting shoots). Soil zymography was coupled with enzyme kinetics to test temperature effects (10, 20, 30 and 40 °C) on the dynamics and localization of these three enzymes in the detritusphere. Total hotspot areas of enzyme activity were 1.9-7.9 times larger and their extension was broader in the detritusphere compared to rhizosphere. From 10 to 30 °C, the hotspot areas enlarged by a factor of 2-24 and Vmax increased by 1.5-6.6 times; both, however, decreased at 40 °C. For the first time, we found a close positive correlation between Vmax and the areas of enzyme activity hotspots, indicating that maximum reaction rate is coupled with hotspot formation. The substrate turnover time at 30 °C were 1.7-6.7-fold faster than at 10 °C. The Km of cellobiohydrolase and phosphatase significantly increased at 30 and 40 °C, indicating high enzyme conformational flexibility, or isoenzyme production at warm temperatures. We conclude that soil warming (at least up to 30°C) increases hotspot areas of enzyme activity and the maximum reaction rate (Vmax) in the detritusphere. This, in turn, leads to faster substrate exhaustion and shortens the duration of hot moments.

Sequence requirement of the ade6-4095 meiotic recombination hotspot in Schizosaccharomyces pombe.

Science.gov (United States)

Foulis, Steven J; Fowler, Kyle R; Steiner, Walter W

2018-02-01

Homologous recombination occurs at a greatly elevated frequency in meiosis compared to mitosis and is initiated by programmed double-strand DNA breaks (DSBs). DSBs do not occur at uniform frequency throughout the genome in most organisms, but occur preferentially at a limited number of sites referred to as hotspots. The location of hotspots have been determined at nucleotide-level resolution in both the budding and fission yeasts, and while several patterns have emerged regarding preferred locations for DSB hotspots, it remains unclear why particular sites experience DSBs at much higher frequency than other sites with seemingly similar properties. Short sequence motifs, which are often sites for binding of transcription factors, are known to be responsible for a number of hotspots. In this study we identified the minimum sequence required for activity of one of such motif identified in a screen of random sequences capable of producing recombination hotspots. The experimentally determined sequence, GGTCTRGACC, closely matches the previously inferred sequence. Full hotspot activity requires an effective sequence length of 9.5 bp, whereas moderate activity requires an effective sequence length of approximately 8.2 bp and shows significant association with DSB hotspots. In combination with our previous work, this result is consistent with a large number of different sequence motifs capable of producing recombination hotspots, and supports a model in which hotspots can be rapidly regenerated by mutation as they are lost through recombination.

Tectonics, climate, and the rise and demise of continental aquatic species richness hotspots.

Science.gov (United States)

Neubauer, Thomas A; Harzhauser, Mathias; Georgopoulou, Elisavet; Kroh, Andreas; Mandic, Oleg

2015-09-15

Continental aquatic species richness hotspots are unevenly distributed across the planet. In present-day Europe, only two centers of biodiversity exist (Lake Ohrid on the Balkans and the Caspian Sea). During the Neogene, a wide variety of hotspots developed in a series of long-lived lakes. The mechanisms underlying the presence of richness hotspots in different geological periods have not been properly examined thus far. Based on Miocene to Recent gastropod distributions, we show that the existence and evolution of such hotspots in inland-water systems are tightly linked to the geodynamic history of the European continent. Both past and present hotspots are related to the formation and persistence of long-lived lake systems in geological basins or to isolation of existing inland basins and embayments from the marine realm. The faunal evolution within hotspots highly depends on warm climates and surface area. During the Quaternary icehouse climate and extensive glaciations, limnic biodiversity sustained a severe decline across the continent and most former hotspots disappeared. The Recent gastropod distribution is mainly a geologically young pattern formed after the Last Glacial Maximum (19 ky) and subsequent formation of postglacial lakes. The major hotspots today are related to long-lived lakes in preglacially formed, permanently subsiding geological basins.

The problems with multi-species conservation: do hotspots, ideal ...

African Journals Online (AJOL)

South Africa urgently requires a national strategic plan for the conservation of the country's biodiversity. The for- mulation of such a plan would be relatively easy if centres (hotspots) of richness, endemism and rarity were con- gruent, both within and among many different taxa, if these hotspots captured a large proportion of ...

The problems with multi-species conservation: do hotspots, ideal ...

African Journals Online (AJOL)

South Africa urgently requires a national strategic plan for the conservation of the country's biodiversity. The formulation of such a plan would be relatively easy if centres (hotspots) of richness, endemism and rarity were congruent, both within and among many different taxa, if these hotspots captured a large proportion of the ...

Climatic and topographical correlates of plant palaeo- and neoendemism in a Mediterranean biodiversity hotspot.

Science.gov (United States)

Molina-Venegas, Rafael; Aparicio, Abelardo; Lavergne, Sébastien; Arroyo, Juan

2017-01-01

Understanding the evolutionary and ecological forces contributing to the emergence of biodiversity hotspots is of outstanding importance to elucidate how they may withstand current climate changes. Here we explored patterns of phylogenetic and non-phylogenetic plant endemism in a Mediterranean biodiversity hotspot. We hypothesized that areas with wet and equable climatic conditions would be prone to long-term persistence of endemic lineages (palaeoendemism), whilst areas of recent local speciation (neoendemism) would be more related to harsher environmental conditions and to high topographical relief promoting speciation. We focused on the Baetic-Rifan biodiversity hotspot (southern Iberian Peninsula and northern Morocco) in combination with molecular phylogenetic information and relative phylogenetic endemism (RPE), a recent phylogenetic measure of endemism, allowing us to discern centres of palaeo- from those of neoendemism. Using eco-geographical regions as study units, we explored correlations between both RPE and endemic species richness with precipitation- and temperature-related variables and with elevation range. Centres of neoendemism were concentrated towards the easternmost part of the hotspot, while centres of palaeoendemism were clustered in the vicinity of the Strait of Gibraltar. The RPE index, indicating more palaeoendemism, was positively correlated with total annual precipitation, while endemic species richness showed a poor correlation. In contrast, elevation range and mean annual temperature were poor predictors of RPE, despite elevation range showing a strong correlation with endemic species richness. The Baetic-Rifan biodiversity hotspot shows clearly differentiated centres of neo- and palaeoendemism. Topographical relief may have driven evolutionary diversification of newly evolved species, while water availability seems more critical for the long-term persistence of ancient lineages in refuge areas of smoother topography. Given climatic

Climatic and topographical correlates of plant palaeo- and neoendemism in a Mediterranean biodiversity hotspot

Science.gov (United States)

Molina-Venegas, Rafael; Aparicio, Abelardo; Lavergne, Sébastien; Arroyo, Juan

2017-01-01

Background and Aims Understanding the evolutionary and ecological forces contributing to the emergence of biodiversity hotspots is of outstanding importance to elucidate how they may withstand current climate changes. Here we explored patterns of phylogenetic and non-phylogenetic plant endemism in a Mediterranean biodiversity hotspot. We hypothesized that areas with wet and equable climatic conditions would be prone to long-term persistence of endemic lineages (palaeoendemism), whilst areas of recent local speciation (neoendemism) would be more related to harsher environmental conditions and to high topographical relief promoting speciation. Methods We focused on the Baetic–Rifan biodiversity hotspot (southern Iberian Peninsula and northern Morocco) in combination with molecular phylogenetic information and relative phylogenetic endemism (RPE), a recent phylogenetic measure of endemism, allowing us to discern centres of palaeo- from those of neoendemism. Using eco-geographical regions as study units, we explored correlations between both RPE and endemic species richness with precipitation- and temperature-related variables and with elevation range. Key Results Centres of neoendemism were concentrated towards the easternmost part of the hotspot, while centres of palaeoendemism were clustered in the vicinity of the Strait of Gibraltar. The RPE index, indicating more palaeoendemism, was positively correlated with total annual precipitation, while endemic species richness showed a poor correlation. In contrast, elevation range and mean annual temperature were poor predictors of RPE, despite elevation range showing a strong correlation with endemic species richness. Conclusions The Baetic–Rifan biodiversity hotspot shows clearly differentiated centres of neo- and palaeoendemism. Topographical relief may have driven evolutionary diversification of newly evolved species, while water availability seems more critical for the long-term persistence of ancient lineages in

Simulation of the landfall of the Deepwater Horizon oil on the shorelines of the Gulf of Mexico.

Science.gov (United States)

Boufadel, Michel C; Abdollahi-Nasab, Ali; Geng, Xiaolong; Galt, Jerry; Torlapati, Jagadish

2014-08-19

We conducted simulations of oil transport from the footprint of the Macondo Well on the water surface throughout the Gulf of Mexico, including deposition on the shorelines. We used the U.S. National Oceanic Atmospheric Administration (NOAA) model General NOAA Operational Modeling Environment (GNOME) and the same parameter values and input adopted by NOAA following the Deepwater Horizon (DWH) blowout. We found that the disappearance rate of oil off the water surface was most likely around 20% per day based on satellite-based observations of the disappearance rate of oil detected on the sea surface after the DWH wellhead was capped. The simulations and oil mass estimates suggest that the mass of oil that reached the shorelines was between 10,000 and 30,000 tons, with an expected value of 22,000 tons. More than 90% of the oil deposition occurred on the Louisiana shorelines, and it occurred in two batches. Simulations revealed that capping the well after 2 weeks would have resulted in only 30% of the total oil depositing on the shorelines, while capping after 3 weeks would have resulted in 60% deposition. Additional delay in capping after 3 weeks would have averted little additional shoreline oiling over the ensuing 4 weeks.

Ancient shorelines of Gujarat, India, during the Indus civilization (Late Mid-Holocene): A study based on archaeological evidences

Digital Repository Service at National Institute of Oceanography (India)

Gaur, A.S.; Vora, K.H.

or production of salt, etc. as indicators of palaeo-shorelines. As of today, these sites are located away from the present shoreline. Lothal, believed to be the oldest dockyard in the world, is located at the head of the Gulf of Khambhat, now situated about... shorelines of Gujarat, India, during the Indus civilization (Late Mid-Holocene): A study ... 16-Nov-06http://www.ias.ac.in/currsci/jul10/articles29.htm centre for acquiring and processing raw materials for manufacturing articles for export. Discovery of two...

Hybrid method for consistent model of the Pacific absolute plate motion and a test for inter-hotspot motion since 70Ma

Science.gov (United States)

Harada, Y.; Wessel, P.; Sterling, A.; Kroenke, L.

2002-12-01

present. We also applied the hybrid method to the African plate motion using the Tristan, St. Helena and Reunion hotspot tracks. We included the southern part of the Mascarene Plateau as the older part of the Reunion hotspot track to the model, since there is age progression along the plateau. The new model of the African absolute motion successfully explains the Ar-Ar ages and the geometry of the African hotspot tracks, and has an abrupt change at around 40 Ma. This event appears synchronous to the 43 Ma event recorded in the Pacific plate motion, and the event should therefore be considered a global one.

Detecting Malaria Hotspots: A Comparison of Rapid Diagnostic Test, Microscopy, and Polymerase Chain Reaction.

Science.gov (United States)

Mogeni, Polycarp; Williams, Thomas N; Omedo, Irene; Kimani, Domtila; Ngoi, Joyce M; Mwacharo, Jedida; Morter, Richard; Nyundo, Christopher; Wambua, Juliana; Nyangweso, George; Kapulu, Melissa; Fegan, Gregory; Bejon, Philip

2017-11-27

Malaria control strategies need to respond to geographical hotspots of transmission. Detection of hotspots depends on the sensitivity of the diagnostic tool used. We conducted cross-sectional surveys in 3 sites within Kilifi County, Kenya, that had variable transmission intensities. Rapid diagnostic test (RDT), microscopy, and polymerase chain reaction (PCR) were used to detect asymptomatic parasitemia, and hotspots were detected using the spatial scan statistic. Eight thousand five hundred eighty-one study participants were surveyed in 3 sites. There were statistically significant malaria hotspots by RDT, microscopy, and PCR for all sites except by microscopy in 1 low transmission site. Pooled data analysis of hotspots by PCR overlapped with hotspots by microscopy at a moderate setting but not at 2 lower transmission settings. However, variations in degree of overlap were noted when data were analyzed by year. Hotspots by RDT were predictive of PCR/microscopy at the moderate setting, but not at the 2 low transmission settings. We observed long-term stability of hotspots by PCR and microscopy but not RDT. Malaria control programs may consider PCR testing to guide asymptomatic malaria hotspot detection once the prevalence of infection falls. © The Author 2017. Published by Oxford University Press for the Infectious Diseases Society of America.

Nanoscale hotspots due to nonequilibrium thermal transport

International Nuclear Information System (INIS)

Sinha, Sanjiv; Goodson, Kenneth E.

2004-01-01

Recent experimental and modeling efforts have been directed towards the issue of temperature localization and hotspot formation in the vicinity of nanoscale heat generating devices. The nonequilibrium transport conditions which develop around these nanoscale devices results in elevated temperatures near the heat source which can not be predicted by continuum diffusion theory. Efforts to determine the severity of this temperature localization phenomena in silicon devices near and above room temperature are of technological importance to the development of microelectronics and other nanotechnologies. In this work, we have developed a new modeling tool in order to explore the magnitude of the additional thermal resistance which forms around nanoscale hotspots from temperatures of 100-1000K. The models are based on a two fluid approximation in which thermal energy is transferred between ''stationary'' optical phonons and fast propagating acoustic phonon modes. The results of the model have shown excellent agreement with experimental results of localized hotspots in silicon at lower temperatures. The model predicts that the effect of added thermal resistance due to the nonequilibrium phonon distribution is greatest at lower temperatures, but is maintained out to temperatures of 1000K. The resistance predicted by the numerical code can be easily integrated with continuum models in order to predict the temperature distribution around nanoscale heat sources with improved accuracy. Additional research efforts also focused on the measurements of the thermal resistance of silicon thin films at higher temperatures, with a focus on polycrystalline silicon. This work was intended to provide much needed experimental data on the thermal transport properties for micro and nanoscale devices built with this material. Initial experiments have shown that the exposure of polycrystalline silicon to high temperatures may induce recrystallization and radically increase the thermal

A micro-epidemiological analysis of febrile malaria in Coastal Kenya showing hotspots within hotspots

NARCIS (Netherlands)

Bejon, P.; Williams, T.N.; Nyundo, C.; Hay, S.I.; Benz, D.; Gething, P.W.; Otiende, M.; Peshu, J.; Bashraheil, M.; Greenhouse, B.; Bousema, T.; Bauni, E.; Marsh, K.; Smith, D.L.; Borrmann, S.

2014-01-01

Malaria transmission is spatially heterogeneous. This reduces the efficacy of control strategies, but focusing control strategies on clusters or 'hotspots' of transmission may be highly effective. Among 1500 homesteads in coastal Kenya we calculated (a) the fraction of febrile children with positive

Effectively identifying regulatory hotspots while capturing expression heterogeneity in gene expression studies

Science.gov (United States)

2014-01-01

Expression quantitative trait loci (eQTL) mapping is a tool that can systematically identify genetic variation affecting gene expression. eQTL mapping studies have shown that certain genomic locations, referred to as regulatory hotspots, may affect the expression levels of many genes. Recently, studies have shown that various confounding factors may induce spurious regulatory hotspots. Here, we introduce a novel statistical method that effectively eliminates spurious hotspots while retaining genuine hotspots. Applied to simulated and real datasets, we validate that our method achieves greater sensitivity while retaining low false discovery rates compared to previous methods. PMID:24708878

Dynamic Changes Analysis and Hotspots Detection of Land Use in the Central Core Functional Area of Jing-Jin-Ji from 2000 to 2015 Based on Remote Sensing Data

Directory of Open Access Journals (Sweden)

Yafei Li

2017-01-01

Full Text Available The article uses GIS spatial analysis and grid technologies to study the dynamic changes, hotspot regions, and driving forces in land use of the central core functional area of Jing-Jin-Ji. The research results are as follows: from 2000 to 2015, the main types of land use in the central core functional area of Jing-Jin-Ji are cultivated land, woodland, and built-up land. In the period of 2005–2010, the transfer between built-up land and cultivated land was frequent. The dynamic degree of single land use in unused land was highest. It also finds out that the dynamic degree of the integrated land use from 2005 to 2010 was higher. The center of gravity transfer of the dynamic degree of integrated land use was concentrated in research area. As for the hotspots, their number and scope are increasing, and the positions located in the edge of original main urban area and developed transportation network. The main characteristics of land use dynamic change in the study area are the rapid decrease of cultivated land area and rapid growth of built-up land. The spatial agglomeration of economic factors caused by human activities has an important influence on the spatial and temporal dynamic changes of land use.

Imaging the Iceland Hotspot Track Beneath Greenland with Seismic Noise Correlations

Science.gov (United States)

Mordret, A.

2017-12-01

During the past 65 million years, the Greenland craton drifted over the Iceland hotspot; however, uncertainties in geodynamic modeling and a lack of geophysical evidence prevent an accurate reconstruction of the hotspot track. I image the Greenland lithosphere down to 300 km depth with seismic noise tomography. The hotspot track is observed as a linear high-velocity anomaly in the middle crust associated with magmatic intrusions. In the upper mantle, the remnant thermal signature of the hotspot manifests as low velocity and low viscosity bodies. This new detailed picture of the Greenland lithosphere will drive more accurate geodynamic reconstructions of tectonic plate motions and prediction of Greenland heat flow, which in turn will enable more precise estimations of the Greenland ice-sheet mass balance.

Recombinational hotspot specific to female meiosis in the mouse major histocompatibility complex.

Science.gov (United States)

Shiroishi, T; Hanzawa, N; Sagai, T; Ishiura, M; Gojobori, T; Steinmetz, M; Moriwaki, K

1990-01-01

The wm7 haplotype of the major histocompatibility complex (MHC), derived from the Japanese wild mouse Mus musculus molossinus, enhances recombination specific to female meiosis in the K/A beta interval of the MHC. We have mapped crossover points of fifteen independent recombinants from genetic crosses of the wm7 and laboratory haplotypes. Most of them were confined to a short segment of approximately 1 kilobase (kb) of DNA between the A beta 3 and A beta 2 genes, indicating the presence of a female-specific recombinational hotspot. Its location overlaps with a sex-independent hotspot previously identified in the Mus musculus castaneus CAS3 haplotype. We have cloned and sequenced DNA fragments surrounding the hotspot from the wm7 haplotype and the corresponding regions from the hotspot-negative B10.A and C57BL/10 strains. There is no significant difference between the sequences of these three strains, or between these and the published sequences of the CAS3 and C57BL/6 strains. However, a comparison of this A beta 3/A beta 2 hotspot with a previously characterized hotspot in the E beta gene revealed that they have a very similar molecular organization. Each hotspot consists of two elements, the consensus sequence of the mouse middle repetitive MT family and the tetrameric repeated sequences, which are separated by 1 kb of DNA.

Virginia ESI: ESI (Environmental Sensitivity Index Shoreline Types - Lines and Polygons)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains vector lines and polygons representing the shoreline and coastal habitats for Virginia, classified according to the Environmental Sensitivity...

Maryland ESI: ESI (Environmental Sensitivity Index Shoreline Types - Lines and Polygons)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains vector lines and polygons representing the shoreline and coastal habitats for Maryland, classified according to the Environmental Sensitivity...

Energy efficient hotspot-targeted embedded liquid cooling of electronics

International Nuclear Information System (INIS)

Sharma, Chander Shekhar; Tiwari, Manish K.; Zimmermann, Severin; Brunschwiler, Thomas; Schlottig, Gerd; Michel, Bruno; Poulikakos, Dimos

2015-01-01

Highlights: • We present a novel concept for hotspot-targeted, energy efficient ELC for electronic chips. • Microchannel throttling zones distribute flow optimally without any external control. • Design is optimized for highly non-uniform multicore chip heat flux maps. • Optimized design minimizes chip temperature non-uniformity. • This is achieved with pumping power consumption less than 1% of total chip power. - Abstract: Large data centers today already account for nearly 1.31% of total electricity consumption with cooling responsible for roughly 33% of that energy consumption. This energy intensive cooling problem is exacerbated by the presence of hotspots in multicore microprocessors due to excess coolant flow requirement for thermal management. Here we present a novel liquid-cooling concept, for targeted, energy efficient cooling of hotspots through passively optimized microchannel structures etched into the backside of a chip (embedded liquid cooling or ELC architecture). We adopt an experimentally validated and computationally efficient modeling approach to predict the performance of our hotspot-targeted ELC design. The design is optimized for exemplar non-uniform chip power maps using Response Surface Methodology (RSM). For industrially acceptable limits of approximately 0.4 bar (40 kPa) on pressure drop and one percent of total chip power on pumping power, the optimized designs are computationally evaluated against a base, standard ELC design with uniform channel widths and uniform flow distribution. For an average steady-state heat flux of 150 W/cm 2 in core areas (hotspots) and 20 W/cm 2 over remaining chip area (background), the optimized design reduces the maximum chip temperature non-uniformity by 61% to 3.7 °C. For a higher average, steady-state hotspot heat flux of 300 W/cm 2 , the maximum temperature non-uniformity is reduced by 54% to 8.7 °C. It is shown that the base design requires a prohibitively high level of pumping power (about

Mid Holocene lake level and shoreline behavior during the Nipissing phase of the upper Great Lakes at Alpena, Michigan, USA

Science.gov (United States)

Thompson, T.A.; Lepper, K.; Endres, A.L.; Johnston, J.W.; Baedke, S.J.; Argyilan, E.P.; Booth, R.K.; Wilcox, D.A.

2011-01-01

The Nipissing phase was the last pre-modern high-water stage of the upper Great Lakes. Represented as either a one- or two-peak highstand, the Nipissing occurred following a long-term lake-level rise. This transgression was primarily an erosional event with only the final stage of the transgression preserved as barriers, spits, and strandplains of beach ridges. South of Alpena, Michigan, mid to late Holocene coastal deposits occur as a strandplain between Devils Lake and Lake Huron. The landward part of this strandplain is a higher elevation platform that formed during the final stage of lake-level rise to the Nipissing peak. The pre-Nipissing shoreline transgressed over Devils Lake lagoonal deposits from 6.4 to 6.1. ka. The first beach ridge formed ~ 6. ka, and then the shoreline advanced toward Lake Huron, producing beach ridges about every 70. years. This depositional regression produced a slightly thickening wedge of sediment during a lake-level rise that formed 20 beach ridges. The rise ended at 4.5. ka at the Nipissing peak. This peak was short-lived, as lake level fell > 4. m during the following 500. years. During this lake-level rise and subsequent fall, the shoreline underwent several forms of shoreline behavior, including erosional transgression, aggradation, depositional transgression, depositional regression, and forced regression. Other upper Great Lakes Nipissing platforms indicate that the lake-level change observed at Alpena of a rapid pre-Nipissing lake-level rise followed by a slower rise to the Nipissing peak, and a post-Nipissing rapid lake-level fall is representative of mid Holocene lake level in the upper Great Lakes. ?? 2011 Elsevier B.V.

Multiscale analysis of restoration priorities for marine shoreline planning.

Science.gov (United States)

Diefenderfer, Heida L; Sobocinski, Kathryn L; Thom, Ronald M; May, Christopher W; Borde, Amy B; Southard, Susan L; Vavrinec, John; Sather, Nichole K

2009-10-01

Planners are being called on to prioritize marine shorelines for conservation status and restoration action. This study documents an approach to determining the management strategy most likely to succeed based on current conditions at local and landscape scales. The conceptual framework based in restoration ecology pairs appropriate restoration strategies with sites based on the likelihood of producing long-term resilience given the condition of ecosystem structures and processes at three scales: the shorezone unit (site), the drift cell reach (nearshore marine landscape), and the watershed (terrestrial landscape). The analysis is structured by a conceptual ecosystem model that identifies anthropogenic impacts on targeted ecosystem functions. A scoring system, weighted by geomorphic class, is applied to available spatial data for indicators of stress and function using geographic information systems. This planning tool augments other approaches to prioritizing restoration, including historical conditions and change analysis and ecosystem valuation.

Interaction of oil and mineral fines on shorelines: review and assessment

International Nuclear Information System (INIS)

Owens, Edward H.; Lee, Kenneth

2003-01-01

The interaction of fine mineral particles with stranded oil in an aqueous medium reduces the adhesion of the oil to solid surfaces, such as sediments or bedrock. The net result is the formation of stable, micron-sized, oil droplets that disperse into the water column. In turn, the increase in surface area makes the oil more available for biodegradation. This interaction, referred to as oil-mineral aggregate (OMA) formation, can explain how oiled shorelines are cleaned naturally in the absence of wave action in very sheltered coastal environments. OMA formation also plays an important role in the efficacy of shoreline treatment techniques, such as physical mixing and sediment relocation that move oiled sediments into the zone of wave action to promote the interaction between oil and mineral fines. Successful application of these shoreline treatment options has been demonstrated at two spill events (the Tampa Bay response in Florida and the Sea Empress operation in Wales) and at a controlled oil spill experiment in the field (the 1997 Svalbard ITOSS program). Sediment relocation harnesses the hydraulic action of waves so that the processes of fine-particle interaction and physical abrasion usually occur in tandem on open coasts. There has been no evidence of significant detrimental side-effects of residual oil in pelagic or benthic environments associated with the use of these treatment options to enhance rates of dispersion and oil biodegradation

Interaction of oil and mineral fines on shorelines: review and assessment

Energy Technology Data Exchange (ETDEWEB)

Owens, Edward H.; Lee, Kenneth

2003-12-01

The interaction of fine mineral particles with stranded oil in an aqueous medium reduces the adhesion of the oil to solid surfaces, such as sediments or bedrock. The net result is the formation of stable, micron-sized, oil droplets that disperse into the water column. In turn, the increase in surface area makes the oil more available for biodegradation. This interaction, referred to as oil-mineral aggregate (OMA) formation, can explain how oiled shorelines are cleaned naturally in the absence of wave action in very sheltered coastal environments. OMA formation also plays an important role in the efficacy of shoreline treatment techniques, such as physical mixing and sediment relocation that move oiled sediments into the zone of wave action to promote the interaction between oil and mineral fines. Successful application of these shoreline treatment options has been demonstrated at two spill events (the Tampa Bay response in Florida and the Sea Empress operation in Wales) and at a controlled oil spill experiment in the field (the 1997 Svalbard ITOSS program). Sediment relocation harnesses the hydraulic action of waves so that the processes of fine-particle interaction and physical abrasion usually occur in tandem on open coasts. There has been no evidence of significant detrimental side-effects of residual oil in pelagic or benthic environments associated with the use of these treatment options to enhance rates of dispersion and oil biodegradation.

Prdm9 Controls Activation of Mammalian Recombination Hotspots

OpenAIRE

Parvanov, Emil D.; Petkov, Petko M.; Paigen, Kenneth

2009-01-01

Mammalian meiotic recombination, which preferentially occurs at specialized sites called hotspots, assures the orderly segregation of meiotic chromosomes and creates genetic variation among offspring. A locus on mouse Chr 17, that controls activation of recombination at multiple distant hotspots, has been mapped within a 181 Kb interval, three of whose genes can be eliminated as candidates. The remaining gene, Prdm9, codes for a zinc finger containing histone H3K4 trimethylase that is uniquel...

Transcription factor cooperativity in early adipogenic hotspots and super-enhancers

DEFF Research Database (Denmark)

Siersbæk, Rasmus; Rabiee, Atefeh; Nielsen, Ronni

2014-01-01

. Using a combination of advanced proteomics and genomics approaches, we identify ∼12,000 transcription factor hotspots (∼400 bp) in the early phase of adipogenesis, and we find evidence of both simultaneous and sequential binding of transcription factors at these regions. We demonstrate that hotspots...

An Investigation on Hot-Spot Temperature Calculation Methods of Power Transformers

OpenAIRE

Ahmet Y. Arabul; Ibrahim Senol; Fatma Keskin Arabul; Mustafa G. Aydeniz; Yasemin Oner; Gokhan Kalkan

2016-01-01

In the standards of IEC 60076-2 and IEC 60076-7, three different hot-spot temperature estimation methods are suggested. In this study, the algorithms which used in hot-spot temperature calculations are analyzed by comparing the algorithms with the results of an experimental set-up made by a Transformer Monitoring System (TMS) in use. In tested system, TMS uses only top oil temperature and load ratio for hot-spot temperature calculation. And also, it uses some constants from standards which ar...

SPITZER OBSERVATIONS OF HOTSPOTS IN RADIO LOBES

International Nuclear Information System (INIS)

Werner, Michael W.; Murphy, David W.; Livingston, John H.; Gorjian, Varoujan; Jones, Dayton L.; Meier, David L.; Lawrence, Charles R.

2012-01-01

We have carried out a systematic search with Spitzer Warm Mission and archival data for infrared emission from the hotspots in radio lobes that have been described by Hardcastle et al. These hotspots have been detected with both radio and X-ray observations, but an observation at an intermediate frequency in the infrared can be critical to distinguish between competing models for particle acceleration and radiation processes in these objects. Between the archival and warm mission data, we report detections of 18 hotspots; the archival data generally include detections at all four IRAC bands, the Warm Mission data only at 3.6 μm. Using a theoretical formalism adopted from Godfrey et al., we fit both archival and warm mission spectral energy distributions (SEDs)—including radio, X-ray, and optical data from Hardcastle as well as the Spitzer data—with a synchrotron self-Compton (SSC) model, in which the X-rays are produced by Compton scattering of the radio frequency photons by the energetic electrons which radiate them. With one exception, an SSC model requires that the magnetic field be less or much less than the equipartition value which minimizes total energy and has comparable amounts of energy in the magnetic field and in the energetic particles. This conclusion agrees with those of comparable recent studies of hotspots, and with the analysis presented by Hardcastle et al. We also show that the infrared data rule out the simplest synchrotron-only models for the SEDs. We briefly discuss the implications of these results and of alternate interpretations of the data.

Morphodynamic implications for shoreline management of the western-Mediterranean sector of Egypt

Science.gov (United States)

Frihy, Omran E.

2009-09-01

Although the western-Mediterranean coast of Egypt between Sallum and Alexandria, ~550 km long, has maintained a considerable equilibrium throughout history, developers have built traditional protective structures in an effort to form sheltered recreational beaches without taking into consideration its geomorphologic characteristics, coastal processes and their harmful impact on the coastal environment and human safety. The improper practices in this environmentally valuable region have induced us to undertake an initiative to carry out a morphodynamic analysis to provide a framework for understanding the relationship between coastal morphology and the prevailing dynamic forces. Based on the degree of natural protection or wave sheltering, the study shoreline can be categorized into four distinct morphotypical stretches: (1) high-energy wave-exposed shores and the outer margins of the rocky headlands, (2) moderate to high wave-energy beaches along semi-exposed embayments and bays mostly downdrift of the rocky headlands, (3) low-wave energy at semi-exposed headland lee-sided and pocket beaches, and (4) calm wave-sheltered enclosing water basins for safe anchorages, moorings and recreation beaches. The results deducted will have practical applications for shoreline management initiatives regarding sustained sites suitable for future beachfront development such as safe swimming conditions, sport facilities, water intakes and sheltered areas for vessels. In addition, benefits realized by the understanding of the morphodynamic processes would enhance our awareness of the significance of the role of western coast morphodynamics in supporting sustainable development via shoreline management. As far as sustainability is concerned, the selection of appropriate sites would help avoiding or minimizing the formation of the hard structures needed for creating safe recreation beaches. On a national scale, results reached could provide reliable database for information that can be

Preserving the evolutionary potential of floras in biodiversity hotspots.

Science.gov (United States)

Forest, Félix; Grenyer, Richard; Rouget, Mathieu; Davies, T Jonathan; Cowling, Richard M; Faith, Daniel P; Balmford, Andrew; Manning, John C; Procheş, Serban; van der Bank, Michelle; Reeves, Gail; Hedderson, Terry A J; Savolainen, Vincent

2007-02-15

One of the biggest challenges for conservation biology is to provide conservation planners with ways to prioritize effort. Much attention has been focused on biodiversity hotspots. However, the conservation of evolutionary process is now also acknowledged as a priority in the face of global change. Phylogenetic diversity (PD) is a biodiversity index that measures the length of evolutionary pathways that connect a given set of taxa. PD therefore identifies sets of taxa that maximize the accumulation of 'feature diversity'. Recent studies, however, concluded that taxon richness is a good surrogate for PD. Here we show taxon richness to be decoupled from PD, using a biome-wide phylogenetic analysis of the flora of an undisputed biodiversity hotspot--the Cape of South Africa. We demonstrate that this decoupling has real-world importance for conservation planning. Finally, using a database of medicinal and economic plant use, we demonstrate that PD protection is the best strategy for preserving feature diversity in the Cape. We should be able to use PD to identify those key regions that maximize future options, both for the continuing evolution of life on Earth and for the benefit of society.

A Glance at Recombination Hotspots in the Domestic Cat.

Directory of Open Access Journals (Sweden)

Hasan Alhaddad

Full Text Available Recombination has essential roles in increasing genetic variability within a population and in ensuring successful meiotic events. The objective of this study is to (i infer the population-scaled recombination rate (ρ, and (ii identify and characterize regions of increased recombination rate for the domestic cat, Felis silvestris catus. SNPs (n = 701 were genotyped in twenty-two East Asian feral cats (random bred. The SNPs covered ten different chromosomal regions (A1, A2, B3, C2, D1, D2, D4, E2, F2, X with an average region size of 850 Kb and an average SNP density of 70 SNPs/region. The Bayesian method in the program inferRho was used to infer regional population recombination rates and hotspots localities. The regions exhibited variable population recombination rates and four decisive recombination hotspots were identified on cat chromosome A2, D1, and E2 regions. As a description of the identified hotspots, no correlation was detected between the GC content and the locality of recombination spots, and the hotspots enclosed L2 LINE elements and MIR and tRNA-Lys SINE elements.

Waves Generated by Asteroid Impacts and Their Hazard Consequences on The Shorelines

Science.gov (United States)

Ezzedine, S. M.; Miller, P. L.; Dearborn, D. S.

2014-12-01

We have performed numerical simulations of a hypothetical asteroid impact onto the ocean in support of an emergency preparedness, planning, and management exercise. We addressed the scenario from asteroid entry; to ocean impact (splash rim); to wave generation, propagation, and interaction with the shoreline. For the analysis we used GEODYN, a hydrocode, to simulate the impact and generate the source wave for the large-scale shallow water wave program, SWWP. Using state-of-the-art, high-performance computing codes we simulated three impact areas — two are located on the West Coast near Los Angeles's shoreline and the San Francisco Bay, respectively, and the third is located in the Gulf of Mexico, with a possible impact location between Texas and Florida. On account of uncertainty in the exact impact location within the asteroid risk corridor, we examined multiple possibilities for impact points within each area. Uncertainty in the asteroid impact location was then convolved and represented as uncertainty in the shoreline flooding zones. This work performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344, and partially funded by the Laboratory Directed Research and Development Program at LLNL under tracking code 12-ERD-005.

Integrating millennial and interdecadal shoreline changes: Morpho-sedimentary investigation of two prograded barriers in southeastern Australia

Science.gov (United States)

Oliver, T. S. N.; Tamura, T.; Hudson, J. P.; Woodroffe, C. D.

2017-07-01

Prograded barriers are distinctive coastal landforms preserving the position of past shorelines as low relief, shore-parallel ridges composed of beach sediments and commonly adorned with variable amounts of dune sand. Prograded barriers have been valued as coastal archives which contain palaeoenvironmental information, however integrating the millennial timescale geological history of barriers with observed inter-decadal modern beach processes has proved difficult. Technologies such as airborne LiDAR, ground penetrating radar (GPR) and optically stimulated luminescence dating (OSL) were utilised at Boydtown and Wonboyn, in southeastern Australia, and combined with previously reported radiocarbon dates and offshore seismic and sedimentological data to reconstruct the morpho-sedimentary history of prograded barrier systems. These technologies enabled reconstruction of geological timescale processes integrated with an inter-decadal model of ridge formation explaining the GPR-imaged subsurface character of the barriers. Both the Boydtown and Wonboyn barriers began prograding 7500-8000 years ago when sea level attained at or near present height along this coastline and continued prograding until the present-day with an initially slower rate of shoreline advancement. Sources of sediment for progradation appear to be the inner shelf and shoreface with a large shelf sand body likely contributing to progradation at Wonboyn. The Towamba River seems to have delivered sediment to Twofold Bay during flood events after transitioning to a mature estuarine system sometime after 4000 cal. yr BP. Some of this material appears to have been reworked onto the Boydtown barrier, increasing the rate of progradation in the seaward 50% of the barrier deposited over the past 1500 years. The GPR imaged beachfaces are shown to have similar geometry to beach profiles following recent storm events and a model of ridge formation involving cut and fill of the beachface, and dune building in the

Coral Reef Watch, Hotspots, 50 km

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch provides Coral Bleaching hotspot maps derived from NOAA's Polar Operational Environmental Satellites (POES). This data provides global area...

Network Kernel Density Estimation for the Analysis of Facility POI Hotspots

Directory of Open Access Journals (Sweden)

YU Wenhao

2015-12-01

Full Text Available The distribution pattern of urban facility POIs (points of interest usually forms clusters (i.e. "hotspots" in urban geographic space. To detect such type of hotspot, the methods mostly employ spatial density estimation based on Euclidean distance, ignoring the fact that the service function and interrelation of urban feasibilities is carried out on the network path distance, neither than conventional Euclidean distance. By using these methods, it is difficult to exactly and objectively delimitate the shape and the size of hotspot. Therefore, this research adopts the kernel density estimation based on the network distance to compute the density of hotspot and proposes a simple and efficient algorithm. The algorithm extends the 2D dilation operator to the 1D morphological operator, thus computing the density of network unit. Through evaluation experiment, it is suggested that the algorithm is more efficient and scalable than the existing algorithms. Based on the case study on real POI data, the range of hotspot can highlight the spatial characteristic of urban functions along traffic routes, in order to provide valuable spatial knowledge and information services for the applications of region planning, navigation and geographic information inquiring.

Classification Model for Forest Fire Hotspot Occurrences Prediction Using ANFIS Algorithm

Science.gov (United States)

Wijayanto, A. K.; Sani, O.; Kartika, N. D.; Herdiyeni, Y.

2017-01-01

This study proposed the application of data mining technique namely Adaptive Neuro-Fuzzy inference system (ANFIS) on forest fires hotspot data to develop classification models for hotspots occurrence in Central Kalimantan. Hotspot is a point that is indicated as the location of fires. In this study, hotspot distribution is categorized as true alarm and false alarm. ANFIS is a soft computing method in which a given inputoutput data set is expressed in a fuzzy inference system (FIS). The FIS implements a nonlinear mapping from its input space to the output space. The method of this study classified hotspots as target objects by correlating spatial attributes data using three folds in ANFIS algorithm to obtain the best model. The best result obtained from the 3rd fold provided low error for training (error = 0.0093676) and also low error testing result (error = 0.0093676). Attribute of distance to road is the most determining factor that influences the probability of true and false alarm where the level of human activities in this attribute is higher. This classification model can be used to develop early warning system of forest fire.

Are mangroves as tough as a seawall? Flow-vegetation interaction in a living shoreline restoration

Science.gov (United States)

Kibler, K. M.; Kitsikoudis, V.; Spiering, D. W.

2017-12-01

This study aims to assess the impact of an established living shoreline restoration on near-shore hydraulics, shoreline slope, and sediment texture and organic matter content. We collected data from three 100 m shoreline sites within an estuarine lagoon in Canaveral National Seashore: one restored; one that had been stabilized by a seawall; and one in a reference condition stabilized by mature mangrove vegetation. The living shoreline site was restored five years prior with a breakwater of oyster shell bags, emergent marsh grasses (Spartina alterniflora), and mangroves (Rhizophora mangle and Avicennia germinans). We sampled water depth and incoming velocity profiles of the full water column at 2 Hz using a 2 MHz Acoustic Doppler Current Profiler (ADCP, Nortek), stationed down-looking, approximately 10 m offshore. A 2 - 3 cm velocity profile above the bed was sampled on the shoreline at 100 Hz, using a Nortek Vectrino profiler. In restored and reference sites, the onshore probe was placed within vegetation. We surveyed vegetation upstream of the probe for species and diameter at water level. Windspeed and direction were collected 2 m above the water surface. Shorelines were surveyed in transects using GPS survey equipment. Five sediment cores were collected to 20 cm depth from both onshore and offshore of each site. Individual cores were processed for loss on ignition before being pooled by site for analysis of grain size distribution. While incoming velocity profiles were similar between sites, hydraulic conditions onshore within the vegetated sites deviated from the seawall site, which was devoid of vegetation. Offshore to onshore gradients in shear stress, mean velocity, and turbulent kinetic energy differed widely between sites, despite similar wind and tidal conditions. Sediment grain sizes were finer and contained more organic matter in the restored and reference sites than in the seawall site. Profiles of the restored and seawall sites were similar, though

Arago Seamount: The missing hotspot found in the Austral Islands

Science.gov (United States)

Bonneville, Alain; Le Suavé, Raymond; Audin, Laurence; Clouard, Valérie; Dosso, Laure; Yves Gillot, Pierre; Janney, Philip; Jordahl, Kelsey; Maamaatuaiahutapu, Keitapu

2002-11-01

The Austral archipelago, on the western side of the South Pacific superswell, is composed of several volcanic chains, corresponding to distinct events from 35 Ma to the present, and lies on oceanic crust created between 60 and 85 Ma. In 1982, Turner and Jarrard proposed that the two distinct volcanic stages found on Rurutu Island and dated as 12 Ma and 1 Ma could be due to two different hotspots, but no evidence of any recent aerial or submarine volcanic source has ever been found. In July 1999, expedition ZEPOLYF2 aboard the R/V L'Atalante conducted a geophysical survey of the northern part of the Austral volcanic archipelago. Thirty seamounts were mapped for the first time, including a very shallow one (French Navy ship that discovered its summit in 1993, is the missing hotspot in the Cook-Austral history. This interpretation adds a new hotspot to the already complicated geologic history of this region. We suggest that several hotspots have been active simultaneously on a region of the seafloor that does not exceed 2000 km in diameter and that each of them had a short lifetime (<20 m.y.). These short-lived and closely spaced hotspots cannot be the result of discrete deep-mantle plumes and are likely due to more local upwelling in the upper mantle strongly influenced by weaknesses in the lithosphere.

Hot-spot measurements on the US-LCT coils in the IFSMTF

International Nuclear Information System (INIS)

Lue, J.W.; Dresner, L.; Fehling, D.T.; Lubell, M.S.; Luton, J.N.; McManamy, T.J.; Shen, S.S.; Wilson, C.T.; Wintenberg, R.E.

1987-01-01

Hot-spot temperature during a quench is a major concern for superconducting coil protection. If the allowable temperature can be increased, then the dump time constant can be made longer and the dump voltage correspondingly reduced. Thus, the insulation requirement can be less stringent and the dump operation can be safer. The US-made Large Coil Task (LCT) coils are all instrumented with heaters, resistive or inductive. The hot-spot temperatures of these coils were found by repeatedly driving the conductor normal with the heaters at increasing coil currents until the normal zone propagated. The resulting hot-spot temperature was measured by the resistance of the conductor over a fixed length. The effect of dump time delay on the hot-spot temperature was also investigated. The results are compared with calculations based on various assumptions. 4 refs., 7 figs

The distribution of large herbivore hotspots in relation to environmental and anthropogenic correlates in the Mara region of Kenya

NARCIS (Netherlands)

Bhola, Nina; Ogutu, Joseph O.; Said, Mohamed Y.; Piepho, Hans-Peter; Olff, Han; Fryxell, John

2012-01-01

1. The distributions of large herbivores in protected areas and their surroundings are becoming increasingly restricted by changing land use, with adverse consequences for wildlife populations. 2. We analyse changes in distributions of herbivore hotspots to understand their environmental and

Archaeological Site Vulnerability Modelling: The Influence of High Impact Storm Events on Models of Shoreline Erosion in the Western Canadian Arctic

Directory of Open Access Journals (Sweden)

O’Rourke Michael J. E.

2017-01-01

Full Text Available Much of the Inuvialuit archaeological record is situated along shorelines of the western Canadian Arctic. These coastal sites are at substantial risk of damage due to a number of geomorphological processes at work in the region. The identification of threatened heritage remains is critical in the Mackenzie Delta, where landscape changes are taking place at an increasingly rapid pace. This paper outlines some preliminary observations from a research program directed toward identifying vulnerable archaeological remains within the Inuvialuit Settlement Region. Coastal erosion rates have been calculated for over 280 km of the Kugmallit Bay shoreline, extending along the eastern extent of Richards Island and neighbouring areas of the Tuktoyaktuk Peninsula. Helicopter surveys conducted during the 2014 field season confirmed that areas exposed to heavy erosive forces in the past continue to erode at alarming rates. Some of the calculated rates, however, have proven far too conservative. An extreme period of erosion at Toker Point in the autumn of 2013 has yielded a prime example of how increasingly volatile weather patterns can influence shoreline erosion models. It has also provided a case with which to demonstrate the value of using more recent, shorter time-interval imagery in assessing impacts to cultural landscapes.

The history, hotspots, and trends of electrocardiogram.

Science.gov (United States)

Yang, Xiang-Lin; Liu, Guo-Zhen; Tong, Yun-Hai; Yan, Hong; Xu, Zhi; Chen, Qi; Liu, Xiang; Zhang, Hong-Hao; Wang, Hong-Bo; Tan, Shao-Hua

2015-07-01

The electrocardiogram (ECG) has broad applications in clinical diagnosis and prognosis of cardiovascular disease. Many researchers have contributed to its progressive development. To commemorate those pioneers, and to better study and promote the use of ECG, we reviewed and present here a systematic introduction about the history, hotspots, and trends of ECG. In the historical part, information including the invention, improvement, and extensive applications of ECG, such as in long QT syndrome (LQTS), angina, and myocardial infarction (MI), are chronologically presented. New technologies and applications from the 1990s are also introduced. In the second part, we use the bibliometric analysis method to analyze the hotspots in the field of ECG-related research. By using total citations and year-specific total citations as our main criteria, four key hotspots in ECG-related research were identified from 11 articles, including atrial fibrillation, LQTS, angina and MI, and heart rate variability. Recent studies in those four areas are also reported. In the final part, we discuss the future trends concerning ECG-related research. The authors believe that improvement of the ECG instrumentation, big data mining for ECG, and the accuracy of diagnosis and application will be areas of continuous concern.

Africa's hotspots of biodiversity redefined

NARCIS (Netherlands)

Küper, W.; Sommer, J.H.; Lovett, J.C.; Beentje, H.J.; Rompaey, van R.S.A.R.; Chatelain, C.; Sosef, M.S.M.; Barthlott, W.

2004-01-01

A key problem for conservation is the coincidence of regions of high biodiversity with regions of high human impact. Twenty-five of the most threatened centers of plant diversity were identified by Myers et al., and these "hotspots" play a crucial role in international conservation strategies. The

SCAT 2000 : a new generation of forms for the description and documentation of oiled shorelines

International Nuclear Information System (INIS)

Owens, E.H.; Sergy, G.A.; Martin, R.D.; Tarpley, J.A.; Michel, J.; Yender, R.

2000-01-01

Over ten years ago, the Exxon Valdez and the Nestucca both generated major oil spills which highlighted the need to develop appropriate response procedures and documentation protocols. The Shoreline Cleanup Assessment Team approach was born. In recent years, the forms were used to describe the conditions resulting from oil spills and shoreline oiling conditions and recommendations were made for improvements and modifications. The call was heard and the staff at Environment Canada worked closely with the staff at the National Oceanic and Atmospheric Administration (NOAA) to review the forms and provide a suitable upgrade for the third generation set of forms. The authors described the improvements which included: (1) a revised standard shoreline oiling form, (2) a revised short form, (3) a tar ball form, and (4) a revised marsh/wetlands oiling form. Environment Canada also introduced (5) a tidal flat form, and (6) a revised sketch map base. It also made provisions for the use of those forms for large freshwater lakes, arctic coasts, mangroves, coral reefs, rivers, and stream environments and for winter ice or snow conditions with a few minor adjustments suggested. Only a few minor differences remained, specifically in the standard shoreline types, between the systems used by NOAA and Environment Canada since both agencies cooperated for their development. 24 refs., 3 tabs., 2 figs

Efficient on-chip hotspot removal combined solution of thermoelectric cooler and mini-channel heat sink

International Nuclear Information System (INIS)

Hao, Xiaohong; Peng, Bei; Xie, Gongnan; Chen, Yi

2016-01-01

Highlights: • A combined solution of thermoelectric cooler (TEC) and mini-channel heat sink to remove the hotspot of the chip has been proposed. • The TEC's mathematical model is established to assess its work performance. • A comparative study on the proposed efficient On-Chip Hotspot Removal Combined Solution. - Abstract: Hotspot will significantly degrade the reliability and performance of the electronic equipment. The efficient removal of hotspot can make the temperature distribution uniform, and ensure the reliable operation of the electronic equipment. This study proposes a combined solution of thermoelectric cooler (TEC) and mini-channel heat sink to remove the hotspot of the chip in the electronic equipment. Firstly, The TEC's mathematical model is established to assess its work performance under different boundary conditions. Then, the hotspot removal capability of the TEC is discussed for different cooling conditions, which has shown that the combined equipment has better hotspot removal capability compared with others. Finally, A TEC is employed to investigate the hotspot removal capacity of the combined solution, and the results have indicated that it can effectively remove hotspot in the diameter of 0.5 mm, the power density of 600W/cm 2 when its working current is 3A and heat transfer thermal resistance is 0 K/W.

Hot-spot mix in ignition-scale inertial confinement fusion targets.

Science.gov (United States)

Regan, S P; Epstein, R; Hammel, B A; Suter, L J; Scott, H A; Barrios, M A; Bradley, D K; Callahan, D A; Cerjan, C; Collins, G W; Dixit, S N; Döppner, T; Edwards, M J; Farley, D R; Fournier, K B; Glenn, S; Glenzer, S H; Golovkin, I E; Haan, S W; Hamza, A; Hicks, D G; Izumi, N; Jones, O S; Kilkenny, J D; Kline, J L; Kyrala, G A; Landen, O L; Ma, T; MacFarlane, J J; MacKinnon, A J; Mancini, R C; McCrory, R L; Meezan, N B; Meyerhofer, D D; Nikroo, A; Park, H-S; Ralph, J; Remington, B A; Sangster, T C; Smalyuk, V A; Springer, P T; Town, R P J

2013-07-26

Mixing of plastic ablator material, doped with Cu and Ge dopants, deep into the hot spot of ignition-scale inertial confinement fusion implosions by hydrodynamic instabilities is diagnosed with x-ray spectroscopy on the National Ignition Facility. The amount of hot-spot mix mass is determined from the absolute brightness of the emergent Cu and Ge K-shell emission. The Cu and Ge dopants placed at different radial locations in the plastic ablator show the ablation-front hydrodynamic instability is primarily responsible for hot-spot mix. Low neutron yields and hot-spot mix mass between 34(-13,+50)  ng and 4000(-2970,+17 160)  ng are observed.

Testing the Efficacy of Global Biodiversity Hotspots for Insect Conservation: The Case of South African Katydids.

Directory of Open Access Journals (Sweden)

Corinna S Bazelet

Full Text Available The use of endemism and vascular plants only for biodiversity hotspot delineation has long been contested. Few studies have focused on the efficacy of global biodiversity hotspots for the conservation of insects, an important, abundant, and often ignored component of biodiversity. We aimed to test five alternative diversity measures for hotspot delineation and examine the efficacy of biodiversity hotspots for conserving a non-typical target organism, South African katydids. Using a 1° fishnet grid, we delineated katydid hotspots in two ways: (1 count-based: grid cells in the top 10% of total, endemic, threatened and/or sensitive species richness; vs. (2 score-based: grid cells with a mean value in the top 10% on a scoring system which scored each species on the basis of its IUCN Red List threat status, distribution, mobility and trophic level. We then compared katydid hotspots with each other and with recognized biodiversity hotspots. Grid cells within biodiversity hotspots had significantly higher count-based and score-based diversity than non-hotspot grid cells. There was a significant association between the three types of hotspots. Of the count-based measures, endemic species richness was the best surrogate for the others. However, the score-based measure out-performed all count-based diversity measures. Species richness was the least successful surrogate of all. The strong performance of the score-based method for hotspot prediction emphasizes the importance of including species' natural history information for conservation decision-making, and is easily adaptable to other organisms. Furthermore, these results add empirical support for the efficacy of biodiversity hotspots in conserving non-target organisms.

Testing the Efficacy of Global Biodiversity Hotspots for Insect Conservation: The Case of South African Katydids.

Science.gov (United States)

Bazelet, Corinna S; Thompson, Aileen C; Naskrecki, Piotr

2016-01-01

The use of endemism and vascular plants only for biodiversity hotspot delineation has long been contested. Few studies have focused on the efficacy of global biodiversity hotspots for the conservation of insects, an important, abundant, and often ignored component of biodiversity. We aimed to test five alternative diversity measures for hotspot delineation and examine the efficacy of biodiversity hotspots for conserving a non-typical target organism, South African katydids. Using a 1° fishnet grid, we delineated katydid hotspots in two ways: (1) count-based: grid cells in the top 10% of total, endemic, threatened and/or sensitive species richness; vs. (2) score-based: grid cells with a mean value in the top 10% on a scoring system which scored each species on the basis of its IUCN Red List threat status, distribution, mobility and trophic level. We then compared katydid hotspots with each other and with recognized biodiversity hotspots. Grid cells within biodiversity hotspots had significantly higher count-based and score-based diversity than non-hotspot grid cells. There was a significant association between the three types of hotspots. Of the count-based measures, endemic species richness was the best surrogate for the others. However, the score-based measure out-performed all count-based diversity measures. Species richness was the least successful surrogate of all. The strong performance of the score-based method for hotspot prediction emphasizes the importance of including species' natural history information for conservation decision-making, and is easily adaptable to other organisms. Furthermore, these results add empirical support for the efficacy of biodiversity hotspots in conserving non-target organisms.

A Personal Digital Assistant (PDA) system for data acquisition during shoreline assessment field surveys

International Nuclear Information System (INIS)

Lamarche, A.; Owens, E.H.; Laflamme, A.; Laforest, S.; Clement, S.

2004-01-01

The Shoreline Cleanup Assessment Technique (SCAT) is a recognized method in North America to collect shoreline information and report observations on an oil spill. The long processing time required to analyze SCAT observations sometimes causes delays in oil spill response. Computerized systems have been developed to address this problem, but data entry of SCAT within such system involves much effort and is subject to potential errors. This paper described the development of a tool dedicated to the field capture of SCAT data on a Windows CE based Personal Digital Assistant (PDA). The system is compatible with both the SCAT methodology and Global Positioning System technology. A prototype of the system was tested during oil spills in Ontario and Nova Scotia. This paper described how the field data collection system was designed, developed and tested. Details of some user interfaces were provided to demonstrate how the large paper Shoreline Oiling Summary forms were made to fit on the small display screen of pocket-size devices. 8 refs., 1 tab., 12 figs

Hotspots, Lifelines, and the Safrr Haywired Earthquake Sequence

Science.gov (United States)

Ratliff, J. L.; Porter, K.

2014-12-01

Though California has experienced many large earthquakes (San Francisco, 1906; Loma Prieta, 1989; Northridge, 1994), the San Francisco Bay Area has not had a damaging earthquake for 25 years. Earthquake risk and surging reliance on smartphones and the Internet to handle everyday tasks raise the question: is an increasingly technology-reliant Bay Area prepared for potential infrastructure impacts caused by a major earthquake? How will a major earthquake on the Hayward Fault affect lifelines (roads, power, water, communication, etc.)? The U.S. Geological Survey Science Application for Risk Reduction (SAFRR) program's Haywired disaster scenario, a hypothetical two-year earthquake sequence triggered by a M7.05 mainshock on the Hayward Fault, addresses these and other questions. We explore four geographic aspects of lifeline damage from earthquakes: (1) geographic lifeline concentrations, (2) areas where lifelines pass through high shaking or potential ground-failure zones, (3) areas with diminished lifeline service demand due to severe building damage, and (4) areas with increased lifeline service demand due to displaced residents and businesses. Potential mainshock lifeline vulnerability and spatial demand changes will be discerned by superimposing earthquake shaking, liquefaction probability, and landslide probability damage thresholds with lifeline concentrations and with large-capacity shelters. Intersecting high hazard levels and lifeline clusters represent potential lifeline susceptibility hotspots. We will also analyze possible temporal vulnerability and demand changes using an aftershock shaking threshold. The results of this analysis will inform regional lifeline resilience initiatives and response and recovery planning, as well as reveal potential redundancies and weaknesses for Bay Area lifelines. Identified spatial and temporal hotspots can provide stakeholders with a reference for possible systemic vulnerability resulting from an earthquake sequence.

Properties of hotspots in plasma focus discharges operating in hydrogen-argon mixtures

International Nuclear Information System (INIS)

Silva, P; Favre, M

2002-01-01

We have investigated the properties of hotspots formed in low energy plasma focus (PF) discharges operating in hydrogen-argon mixtures, at 140 kA current level. A combination of filtered pinhole and slit-wire camera is used to measure the hotspot size and temperature. The results show that the best conditions for reproducible and localized hotspot formation are obtained by adjusting the base pressure in such a way that the mass load allows the time of first radial collapse to coincide with peak current. When the PF is operated with 20% argon content, rather uniform hotspots, of 115 μm characteristic size and 300 eV characteristic temperature, are produced with a better than 80% reproducibility in their axial localization. The electron density in the hotspots is estimated to be ∼10 20 cm -3 . Calculations performed with a CRE code indicate that a significant fraction of the radiation is emitted in the 3.2 to 3.88 keV region, corresponding to K α emission from highly ionized argon

The silent mass extinction of insect herbivores in biodiversity hotspots.

Science.gov (United States)

Fonseca, Carlos Roberto

2009-12-01

Habitat loss is silently leading numerous insects to extinction. Conservation efforts, however, have not been designed specifically to protect these organisms, despite their ecological and evolutionary significance. On the basis of species-host area equations, parameterized with data from the literature and interviews with botanical experts, I estimated the number of specialized plant-feeding insects (i.e., monophages) that live in 34 biodiversity hotspots and the number committed to extinction because of habitat loss. I estimated that 795,971-1,602,423 monophagous insect species live in biodiversity hotspots on 150,371 endemic plant species, which is 5.3-10.6 monophages per plant species. I calculated that 213,830-547,500 monophagous species are committed to extinction in biodiversity hotspots because of reduction of the geographic range size of their endemic hosts. I provided rankings of biodiversity hotspots on the basis of estimated richness of monophagous insects and on estimated number of extinctions of monophagous species. Extinction rates were predicted to be higher in biodiversity hotspots located along strong environmental gradients and on archipelagos, where high spatial turnover of monophagous species along the geographic distribution of their endemic plants is likely. The results strongly support the overall strategy of selecting priority conservation areas worldwide primarily on the basis of richness of endemic plants. To face the global decline of insect herbivores, one must expand the coverage of the network of protected areas and improve the richness of native plants on private lands.

Hotspots of Community Change: Temporal Dynamics Are Spatially Variable in Understory Plant Composition of a California Oak Woodland.

Directory of Open Access Journals (Sweden)

Erica N Spotswood

Full Text Available Community response to external drivers such climate and disturbance can lead to fluctuations in community composition, or to directional change. Temporal dynamics can be influenced by a combination of drivers operating at multiple spatial scales, including external landscape scale drivers, local abiotic conditions, and local species pools. We hypothesized that spatial variation in these factors can create heterogeneity in temporal dynamics within landscapes. We used understory plant species composition from an 11 year dataset from a California oak woodland to compare plots where disturbance was experimentally manipulated with the removal of livestock grazing and a prescribed burn. We quantified three properties of temporal variation: compositional change (reflecting the appearance and disappearance of species, temporal fluctuation, and directional change. Directional change was related most strongly to disturbance type, and was highest at plots where grazing was removed during the study. Temporal fluctuations, compositional change, and directional change were all related to intrinsic abiotic factors, suggesting that some locations are more responsive to external drivers than others. Temporal fluctuations and compositional change were linked to local functional composition, indicating that environmental filters can create subsets of the local species pool that do not respond in the same way to external drivers. Temporal dynamics are often assumed to be relatively static at the landscape scale, provided disturbance and climate are continuous. This study shows that local and landscape scale factors jointly influence temporal dynamics creating hotspots that are particularly responsive to climate and disturbance. Thus, adequate predictions of response to disturbance or to changing climate will only be achieved by considering how factors at multiple spatial scales influence community resilience and recovery.

Hotspots of Community Change: Temporal Dynamics Are Spatially Variable in Understory Plant Composition of a California Oak Woodland.

Science.gov (United States)

Spotswood, Erica N; Bartolome, James W; Allen-Diaz, Barbara

2015-01-01

Community response to external drivers such climate and disturbance can lead to fluctuations in community composition, or to directional change. Temporal dynamics can be influenced by a combination of drivers operating at multiple spatial scales, including external landscape scale drivers, local abiotic conditions, and local species pools. We hypothesized that spatial variation in these factors can create heterogeneity in temporal dynamics within landscapes. We used understory plant species composition from an 11 year dataset from a California oak woodland to compare plots where disturbance was experimentally manipulated with the removal of livestock grazing and a prescribed burn. We quantified three properties of temporal variation: compositional change (reflecting the appearance and disappearance of species), temporal fluctuation, and directional change. Directional change was related most strongly to disturbance type, and was highest at plots where grazing was removed during the study. Temporal fluctuations, compositional change, and directional change were all related to intrinsic abiotic factors, suggesting that some locations are more responsive to external drivers than others. Temporal fluctuations and compositional change were linked to local functional composition, indicating that environmental filters can create subsets of the local species pool that do not respond in the same way to external drivers. Temporal dynamics are often assumed to be relatively static at the landscape scale, provided disturbance and climate are continuous. This study shows that local and landscape scale factors jointly influence temporal dynamics creating hotspots that are particularly responsive to climate and disturbance. Thus, adequate predictions of response to disturbance or to changing climate will only be achieved by considering how factors at multiple spatial scales influence community resilience and recovery.

Shoreline changes and its impact on archaeological sites in West Greenland

Science.gov (United States)

Fenger-Nielsen, R.; Kroon, A.; Elberling, B.; Hollesen, J.

2017-12-01

Coastal erosion is regarded as a major threat to archaeological sites in the Arctic region. The problem arises because the predominantly marine-focused lifeways of Arctic people means that the majority of archaeological sites are found near the coast. On a Pan-Arctic scale, coastal erosion is often explained by long-term processes such as sea level rise, lengthening of open water periods due to a decline in sea ice, and a predicted increase in the frequency of major storms. However, on a local scale other short-term processes may be important parameters determining the coastal development. In this study, we focus on the Nuuk fjord system in West Greenland, which has been inhabited over the past 4000 years by different cultures and holds around 260 registered archaeological settlements. The fjord is characterized by its large branching of narrow deep-water and well-shaded water bodies, where tidal processes and local sources of sediment supply by rivers are observed to be the dominant factors determining the coastal development. We present a regional model showing the vulnerability of the shoreline and archeological sites due to coastal processes. The model is based on a) levelling surveys and historical aerial photographs of nine specific sites distributed in the region, b) water level measurements at three sites representing the inner-, middle- and outer fjord system, c) aerial photographs, satellite images and meteorological data of the entire region used to up-scale our local information at a specific settlement scale towards a regional scale. This deals with spatial and temporal variability in erosion and accumulation patterns along the shores in fjords and open seas.

Automated hotspot analysis with aerial image CD metrology for advanced logic devices

Science.gov (United States)

Buttgereit, Ute; Trautzsch, Thomas; Kim, Min-ho; Seo, Jung-Uk; Yoon, Young-Keun; Han, Hak-Seung; Chung, Dong Hoon; Jeon, Chan-Uk; Meyers, Gary

2014-09-01

Continuously shrinking designs by further extension of 193nm technology lead to a much higher probability of hotspots especially for the manufacturing of advanced logic devices. The CD of these potential hotspots needs to be precisely controlled and measured on the mask. On top of that, the feature complexity increases due to high OPC load in the logic mask design which is an additional challenge for CD metrology. Therefore the hotspot measurements have been performed on WLCD from ZEISS, which provides the benefit of reduced complexity by measuring the CD in the aerial image and qualifying the printing relevant CD. This is especially of advantage for complex 2D feature measurements. Additionally, the data preparation for CD measurement becomes more critical due to the larger amount of CD measurements and the increasing feature diversity. For the data preparation this means to identify these hotspots and mark them automatically with the correct marker required to make the feature specific CD measurement successful. Currently available methods can address generic pattern but cannot deal with the pattern diversity of the hotspots. The paper will explore a method how to overcome those limitations and to enhance the time-to-result in the marking process dramatically. For the marking process the Synopsys WLCD Output Module was utilized, which is an interface between the CATS mask data prep software and the WLCD metrology tool. It translates the CATS marking directly into an executable WLCD measurement job including CD analysis. The paper will describe the utilized method and flow for the hotspot measurement. Additionally, the achieved results on hotspot measurements utilizing this method will be presented.

Analysis of microstructure-dependent shock dissipation and hot-spot formation in granular metalized explosive

Science.gov (United States)

Chakravarthy, Sunada; Gonthier, Keith A.

2016-07-01

Variations in the microstructure of granular explosives (i.e., particle packing density, size, shape, and composition) can affect their shock sensitivity by altering thermomechanical fields at the particle-scale during pore collapse within shocks. If the deformation rate is fast, hot-spots can form, ignite, and interact, resulting in burn at the macro-scale. In this study, a two-dimensional finite and discrete element technique is used to simulate and examine shock-induced dissipation and hot-spot formation within low density explosives (68%-84% theoretical maximum density (TMD)) consisting of large ensembles of HMX (C4H8N8O8) and aluminum (Al) particles (size ˜ 60 -360 μm). Emphasis is placed on identifying how the inclusion of Al influences effective shock dissipation and hot-spot fields relative to equivalent ensembles of neat/pure HMX for shocks that are sufficiently strong to eliminate porosity. Spatially distributed hot-spot fields are characterized by their number density and area fraction enabling their dynamics to be described in terms of nucleation, growth, and agglomeration-dominated phases with increasing shock strength. For fixed shock particle speed, predictions indicate that decreasing packing density enhances shock dissipation and hot-spot formation, and that the inclusion of Al increases dissipation relative to neat HMX by pressure enhanced compaction resulting in fewer but larger HMX hot-spots. Ensembles having bimodal particle sizes are shown to significantly affect hot-spot dynamics by altering the spatial distribution of hot-spots behind shocks.

Future hotspots of terrestrial mammal loss

Science.gov (United States)

Visconti, Piero; Pressey, Robert L.; Giorgini, Daniele; Maiorano, Luigi; Bakkenes, Michel; Boitani, Luigi; Alkemade, Rob; Falcucci, Alessandra; Chiozza, Federica; Rondinini, Carlo

2011-01-01

Current levels of endangerment and historical trends of species and habitats are the main criteria used to direct conservation efforts globally. Estimates of future declines, which might indicate different priorities than past declines, have been limited by the lack of appropriate data and models. Given that much of conservation is about anticipating and responding to future threats, our inability to look forward at a global scale has been a major constraint on effective action. Here, we assess the geography and extent of projected future changes in suitable habitat for terrestrial mammals within their present ranges. We used a global earth-system model, IMAGE, coupled with fine-scale habitat suitability models and parametrized according to four global scenarios of human development. We identified the most affected countries by 2050 for each scenario, assuming that no additional conservation actions other than those described in the scenarios take place. We found that, with some exceptions, most of the countries with the largest predicted losses of suitable habitat for mammals are in Africa and the Americas. African and North American countries were also predicted to host the most species with large proportional global declines. Most of the countries we identified as future hotspots of terrestrial mammal loss have little or no overlap with the present global conservation priorities, thus confirming the need for forward-looking analyses in conservation priority setting. The expected growth in human populations and consumption in hotspots of future mammal loss mean that local conservation actions such as protected areas might not be sufficient to mitigate losses. Other policies, directed towards the root causes of biodiversity loss, are required, both in Africa and other parts of the world. PMID:21844048

A simple model for the pressure field from a distribution of hotspots

International Nuclear Information System (INIS)

Lambourn, B D; Lacy, H J; Handley, C A; James, H R

2014-01-01

At the APS SCCM in 2009, Hill, Zimmermann and Nichols showed that assuming burn fronts propagate at constant speed from individual point hotspots distributed randomly in a volume, the reaction rate history could be determined. In this paper a simple analytic approximation is found for the time history of the pressure in the volume. Using acoustic theory, the time history of the pressure field for burning from a single spherical, isolated hotspot of finite radius is developed. Then at any point in the volume, the overall pressure history is determined from the sum of the pressure fields from all the individual hotspots. The results are shown to be in qualitative agreement with 1D mesoscale hydrocode calculations of the reaction and burning from a finite size spherical hotspot.

Monitoring the trajectory of urban nighttime light hotspots using a Gaussian volume model

Science.gov (United States)

Zheng, Qiming; Jiang, Ruowei; Wang, Ke; Huang, Lingyan; Ye, Ziran; Gan, Muye; Ji, Biyong

2018-03-01

Urban nighttime light hotspot is an ideal representation of the spatial heterogeneity of human activities within a city, which is sensitive to regional urban expansion pattern. However, most of previous studies related to nighttime light imageries focused on extracting urban extent, leaving the spatial variation of radiance intensity insufficiently explored. With the help of global radiance calibrated DMSP-OLS datasets (NTLgrc), we proposed an innovative framework to explore the spatio-temporal trajectory of polycentric urban nighttime light hotspots. Firstly, NTLgrc was inter-annually calibrated to improve the consistency. Secondly, multi-resolution segmentation and region-growing SVM classification were employed to remove blooming effect and to extract potential clusters. At last, the urban hotspots were identified by a Gaussian volume model, and the resulting parameters were used to quantitatively depict hotspot features (i.e., intensity, morphology and centroid dynamics). The result shows that our framework successfully captures hotspots in polycentric urban area, whose Ra2 are over 0.9. Meanwhile, the spatio-temporal dynamics of the hotspot features intuitively reveal the impact of the regional urban growth pattern and planning strategies on human activities. Compared to previous studies, our framework is more robust and offers an effective way to describe hotspot pattern. Also, it provides a more comprehensive and spatial-explicit understanding regarding the interaction between urbanization pattern and human activities. Our findings are expected to be beneficial to governors in term of sustainable urban planning and decision making.

Highly polarized emission from the E-hotspot in DA240

International Nuclear Information System (INIS)

Tsien, S.C.; Saunders, R.

1982-01-01

The hotspot in the eastern lobe of the nearby giant radio galaxy DA240 (z=0.0356) provides a rare opportunity to examine the detailed polarization structure of a hotspot. Maps have been made with the Cambridge 5-km telescope at 2.7 and 5.0 GHz and the 5.0-GHz maps are shown here. The main characteristics are discussed briefly. (Auth.)

Finding trans-regulatory genes and protein complexes modulating meiotic recombination hotspots of human, mouse and yeast.

Science.gov (United States)

Wu, Min; Kwoh, Chee-Keong; Li, Xiaoli; Zheng, Jie

2014-09-11

The regulatory mechanism of recombination is one of the most fundamental problems in genomics, with wide applications in genome wide association studies (GWAS), birth-defect diseases, molecular evolution, cancer research, etc. Recombination events cluster into short genomic regions called "recombination hotspots". Recently, a zinc finger protein PRDM9 was reported to regulate recombination hotspots in human and mouse genomes. In addition, a 13-mer motif contained in the binding sites of PRDM9 is found to be enriched in human hotspots. However, this 13-mer motif only covers a fraction of hotspots, indicating that PRDM9 is not the only regulator of recombination hotspots. Therefore, the challenge of discovering other regulators of recombination hotspots becomes significant. Furthermore, recombination is a complex process. Hence, multiple proteins acting as machinery, rather than individual proteins, are more likely to carry out this process in a precise and stable manner. Therefore, the extension of the prediction of individual trans-regulators to protein complexes is also highly desired. In this paper, we introduce a pipeline to identify genes and protein complexes associated with recombination hotspots. First, we prioritize proteins associated with hotspots based on their preference of binding to hotspots and coldspots. Second, using the above identified genes as seeds, we apply the Random Walk with Restart algorithm (RWR) to propagate their influences to other proteins in protein-protein interaction (PPI) networks. Hence, many proteins without DNA-binding information will also be assigned a score to implicate their roles in recombination hotspots. Third, we construct sub-PPI networks induced by top genes ranked by RWR for various species (e.g., yeast, human and mouse) and detect protein complexes in those sub-PPI networks. The GO term analysis show that our prioritizing methods and the RWR algorithm are capable of identifying novel genes associated with

Finding radiation hot-spots for a private residence/decontamination manual

International Nuclear Information System (INIS)

Nishizawa, Kunihide

2012-01-01

Since the Fukushima Daiichi Nuclear Power Station accident, the radio-iodine and cesium analysis group of ad hoc committee of safety measures has investigated initial screening monitor of the soils and examined contamination and experienced decontamination works. Existence of hot-spots where Cs 137 is concentrated is confirmed. The report makes a manual to find such a hot-spot in a private residence and how the decontamination should be carried out. Particularly, the report provides the definite examples of hot-spots, for instances, a roof, an eaves trough (a gutter), a side drain (a ditch), dead leaves (withered grass), surface land, a wood block, etc. and how the decontamination should be confirmed and the dusts be collected and kept. (S. Ohno)

Applying Hotspot Detection Methods in Forestry: A Case Study of Chestnut Oak Regeneration

International Nuclear Information System (INIS)

Fei, S.

2010-01-01

Hotspot detection has been widely adopted in health sciences for disease surveillance, but rarely in natural resource disciplines. In this paper, two spatial scan statistics (SaT Scan and Cluster Seer) and a non spatial classification and regression trees method were evaluated as techniques for identifying chestnut oak (Quercus Montana) regeneration hotspots among 50 mixed-oak stands in the central Appalachian region of the eastern United States. Hotspots defined by the three methods had a moderate level of conformity and revealed similar chestnut oak regeneration site affinity. Chestnut oak regeneration hotspots were positively associated with the abundance of chestnut oak trees in the over story and a moderate cover of heather species (Vaccinium and Gaylussacia spp.) but were negatively associated with the abundance of hay scented fern (Dennstaedtia punctilobula) and mountain laurel (Kalmia latiforia). In general, hotspot detection is a viable tool for assisting natural resource managers with identifying areas possessing significantly high or low tree regeneration.

Applying Hotspot Detection Methods in Forestry: A Case Study of Chestnut Oak Regeneration

Directory of Open Access Journals (Sweden)

Songlin Fei

2010-01-01

Full Text Available Hotspot detection has been widely adopted in health sciences for disease surveillance, but rarely in natural resource disciplines. In this paper, two spatial scan statistics (SaTScan and ClusterSeer and a nonspatial classification and regression trees method were evaluated as techniques for identifying chestnut oak (Quercus Montana regeneration hotspots among 50 mixed-oak stands in the central Appalachian region of the eastern United States. Hotspots defined by the three methods had a moderate level of conformity and revealed similar chestnut oak regeneration site affinity. Chestnut oak regeneration hotspots were positively associated with the abundance of chestnut oak trees in the overstory and a moderate cover of heather species (Vaccinium and Gaylussacia spp. but were negatively associated with the abundance of hayscented fern (Dennstaedtia punctilobula and mountain laurel (Kalmia latiforia. In general, hotspot detection is a viable tool for assisting natural resource managers with identifying areas possessing significantly high or low tree regeneration.

Biodiversity hotspots: A shortcut for a more complicated concept

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Christian Marchese

2015-01-01

Full Text Available In an era of human activities, global environmental changes, habitat loss and species extinction, conservation strategies are a crucial step toward minimizing biodiversity loss. For instance, oceans acidification and land use are intensifying in many places with negative and often irreversible consequences for biodiversity. Biodiversity hotspots, despite some criticism, have become a tool for setting conservation priorities and play an important role in decision-making for cost-effective strategies to preserve biodiversity in terrestrial and, to some extent, marine ecosystems. This area-based approach can be applied to any geographical scale and it is considered to be one of the best approaches for maintaining a large proportion of the world’s biological diversity. However, delineating hotspots includes quantitative criteria along with subjective considerations and the risk is to neglect areas, such as coldspots, with other types of conservation value. Nowadays, it is widely acknowledged that biodiversity is much more than just the number of species in a region and a conservation strategy cannot be based merely on the number of taxa present in an ecosystem. Therefore, the idea that strongly emerges is the need to reconsider conservation priorities and to go toward an interdisciplinary approach through the creation of science-policy partnerships.

Environmental and Microbial Features Affecting Denitrification and Anammox Hotspots in an Estuarine Ecosystem

Science.gov (United States)

Lisa, J.; Song, B.; Lefcheck, J. S.; Tobias, C. R.

2016-02-01

Biogeochemical hotspots are characterized as a few sites that exhibit extremely high reaction rates relative to surrounding area, and often account for a high percentage of the overall reaction rates in an ecosystem. Criteria for quantitatively identifying these sites have not been well established. Further, the underlying mechanisms of hotspots have been described in terms of environmental conditions, with little attention paid to the microbial community. The objectives of this study were to establish quantitative criteria to identify denitrification and anammox hotspots, and determine the underlying microbial and environmental factors responsible for elevated N2 production. We used 15N isotope pairing incubation experiments to measure denitrification and anammox rates in the New River Estuary, NC. Quantitative PCR assays of nitrous oxide reductase (nosZ Clades I and II) and hydrazine oxidoreductase (hzo) genes were conducted to estimate denitrifier and anammox abundance. Structural Equation Modeling (SEM) was used to elucidate complex causal relationships between environmental and biological variables. Denitrification hotspots, quantitatively defined as statistical outliers, accounted for 35.6% total denitrification while comprising only 7.3% of the sites. Anammox hotspots,10.6% of the sites, accounted for 60.9% of total anammox. SEM revealed increased sediment organics at lower salinities supported higher functional gene abundance, which in turn resulted in higher N2 production. Surprisingly, denitrification rates were significantly and positively correlated with nosZ Clade II gene abundance, after accounting for the non-significant contributions of the naturally more abundant nosZ Clade I, and other environmental covariates. This is the first time that a quantitative definition of biogeochemical hotspots was put forth and used to determine the importance of anammox and denitrification hotspots in estuarine nitrogen removal capacity. Despite the low area

Hotspot detection using space-time scan statistics on children under five years of age in Depok

Science.gov (United States)

Verdiana, Miranti; Widyaningsih, Yekti

2017-03-01

Some problems that affect the health level in Depok is the high malnutrition rates from year to year and the more spread infectious and non-communicable diseases in some areas. Children under five years old is a vulnerable part of population to get the malnutrition and diseases. Based on this reason, it is important to observe the location and time, where and when, malnutrition in Depok happened in high intensity. To obtain the location and time of the hotspots of malnutrition and diseases that attack children under five years old, space-time scan statistics method can be used. Space-time scan statistic is a hotspot detection method, where the area and time of information and time are taken into account simultaneously in detecting the hotspots. This method detects a hotspot with a cylindrical scanning window: the cylindrical pedestal describes the area, and the height of cylinder describe the time. Cylinders formed is a hotspot candidate that may occur, which require testing of hypotheses, whether a cylinder can be summed up as a hotspot. Hotspot detection in this study carried out by forming a combination of several variables. Some combination of variables provides hotspot detection results that tend to be the same, so as to form groups (clusters). In the case of infant health level in Depok city, Beji health care center region in 2011-2012 is a hotspot. According to the combination of the variables used in the detection of hotspots, Beji health care center is most frequently as a hotspot. Hopefully the local government can take the right policy to improve the health level of children under five in the city of Depok.

Two centuries of coastal change at Caesarea, Israel: natural processes vs. human intervention

Science.gov (United States)

Shtienberg, Gilad; Zviely, Dov; Sivan, Dorit; Lazar, Michael

2014-08-01

The coast at Caesarea, Israel, has been inhabited almost continuously for the last 2,400 years, and the archeological sites are today a major international tourist attraction. Because the sites straddle the shoreline, they are subject to constant damage by wave action, and must therefore be frequently restored. In this paper, local shoreline migrations over the last 200 years are investigated with the aim of distinguishing between natural and man-made coastal changes. In order to assess these changes accurately, geomorphological and sedimentological data were examined based on detailed beach profile measurements, bathymetric surveys, and grain-size analyses. In addition, series of old aerial photographs, as well as historical topographic maps and nautical charts were consulted. The results show that shoreline changes can be grouped into two main time periods. During the first period from 1862 to 1949 before the expansion of modern settlements, the position of the shoreline changed irregularly by up to 30 m. In the second period from 1949 onward, numerous coastal structures have been erected, and various coastal modifications have been carried out. The evaluation of the data suggests that human interventions have had relatively little effect on the overall position of the shoreline, as displacements ranged only from 5 to 18 m. Thus, coastal changes at Caesarea are predominantly due to natural wave action reflected in the heterogeneous geomorphological and sedimentological characteristics of the shore. This contradicts the common assumption that human activities are always mainly responsible for large-scale shoreline modifications in the region. It is concluded that, in order to implement meaningful mitigating countermeasures, coastal archeological sites need to be individually assessed with respect to the dominant factors causing local coastal change.

Specific modifications of histone tails, but not DNA methylation, mirror the temporal variation of mammalian recombination hotspots.

Science.gov (United States)

Zeng, Jia; Yi, Soojin V

2014-10-16

Recombination clusters nonuniformly across mammalian genomes at discrete genomic loci referred to as recombination hotspots. Despite their ubiquitous presence, individual hotspots rapidly lose their activities, and the molecular and evolutionary mechanisms underlying such frequent hotspot turnovers (the so-called "recombination hotspot paradox") remain unresolved. Even though some sequence motifs are significantly associated with hotspots, multiple lines of evidence indicate that factors other than underlying sequences, such as epigenetic modifications, may affect the evolution of recombination hotspots. Thus, identifying epigenetic factors that covary with recombination at fine-scale is a promising step for this important research area. It was previously reported that recombination rates correlate with indirect measures of DNA methylation in the human genome. Here, we analyze experimentally determined DNA methylation and histone modification of human sperms, and show that the correlation between DNA methylation and recombination in long-range windows does not hold with respect to the spatial and temporal variation of recombination at hotspots. On the other hand, two histone modifications (H3K4me3 and H3K27me3) overlap extensively with recombination hotspots. Similar trends were observed in mice. These results indicate that specific histone modifications rather than DNA methylation are associated with the rapid evolution of recombination hotspots. Furthermore, many human recombination hotspots occupy "bivalent" chromatin regions that harbor both active (H3K4me3) and repressive (H3K27me3) marks. This may explain why human recombination hotspots tend to occur in nongenic regions, in contrast to yeast and Arabidopsis hotspots that are characterized by generally active chromatins. Our results highlight the dynamic epigenetic underpinnings of recombination hotspot evolution. © The Author(s) 2014. Published by Oxford University Press on behalf of the Society for

HIV protein sequence hotspots for crosstalk with host hub proteins.

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Mahdi Sarmady

Full Text Available HIV proteins target host hub proteins for transient binding interactions. The presence of viral proteins in the infected cell results in out-competition of host proteins in their interaction with hub proteins, drastically affecting cell physiology. Functional genomics and interactome datasets can be used to quantify the sequence hotspots on the HIV proteome mediating interactions with host hub proteins. In this study, we used the HIV and human interactome databases to identify HIV targeted host hub proteins and their host binding partners (H2. We developed a high throughput computational procedure utilizing motif discovery algorithms on sets of protein sequences, including sequences of HIV and H2 proteins. We identified as HIV sequence hotspots those linear motifs that are highly conserved on HIV sequences and at the same time have a statistically enriched presence on the sequences of H2 proteins. The HIV protein motifs discovered in this study are expressed by subsets of H2 host proteins potentially outcompeted by HIV proteins. A large subset of these motifs is involved in cleavage, nuclear localization, phosphorylation, and transcription factor binding events. Many such motifs are clustered on an HIV sequence in the form of hotspots. The sequential positions of these hotspots are consistent with the curated literature on phenotype altering residue mutations, as well as with existing binding site data. The hotspot map produced in this study is the first global portrayal of HIV motifs involved in altering the host protein network at highly connected hub nodes.

Hot-spot measurements on the U.S.-LCT coils in the IFSMTF

International Nuclear Information System (INIS)

Lue, J.W.; Dresner, L.; Fehling, D.T.; Lubell, M.S.; Luton, J.N.; McManamy, T.J.; Shen, S.S.; Wilson, C.T.; Wintenberg, R.E.

1987-01-01

Hot-spot temperature during a quench is a major concern for superconducting coil protection. If the allowable temperature can be increased, then the dump time constant can be made longer and the dump voltage correspondingly reduced. Thus, the insulation requirement can be less stringent and the dump operation can be safer. The U.S.-made Large Coil Task (LCT) coils are all instrumented with heaters, resistive or inductive. The hot-spot temperatures of these coils were found by repeatedly driving the conductor normal with the heaters at increasing coil currents until the normal zone propagated. The resulting hot-spot temperature was measured by the resistance of the conductor over a fixed length. The effect of dump time delay on the hot-spot temperature was also investigated. The results are compared with calculations based on various assumptions

New Horizons-LEISA Observations Of Io's Hotspots During The 2007 Encounter

Science.gov (United States)

Tsang, Constantine; Rathbun, J. A.; Spencer, J. R.

2012-10-01

The New Horizons spacecraft flew past Jupiter and its satellites in February 2007. The flyby provided one of the most exquisite sets of observations of Io’s active plumes and hotspots yet taken, including many observations of a large 350 km high eruption plume at Tvashtar. Among the suite of instruments active during the flyby was the Linear Etalon Infrared Spectral Array (LEISA), a near-infrared imaging spectrometer. It covers the wavelength region between 1.25 and 2.5 µm, at a resolving power of 240, with a higher resolving power segment (R=540), covering 2.1 to 2.25 µm. Both segments share the same detector array to give on a 256 x 256 pixel spectral image at 62 µrad per pixel field-of-view. LEISA identified more than 30 individual hotspots on Io, over the seven spectral cubes taken during the flyby. We can measure the thermal emission from these volcanoes, and arrive at eruption temperatures by fitting blackbody curves to hotspot spectra. The temperatures of Tvashtar, Pele and East Girru were all derived in the Spencer et al., (2007) study. These volcanoes were consistent with basaltic volcanism with temperatures between 1287 and 1335 K. Here, we present blackbody fits of the other volcanic hotspots identified in the spectral images to complete the study of hotspot locations, eruption temperatures, emitting area and temporal variability where possible.

Temperature dependence of the current to sustain a normal hotspot in superconducting microbridges

International Nuclear Information System (INIS)

Yamaguchi, Y.; Ishii, C.

1981-01-01

A modification of the boundary condition to determine the SN boundary in the hotspot model of superconducting microbridges is proposed and successfully applied to the interpretation of recent measurements of the hotspot-sustaining current by Mizuno and Aomine. It is shown that suppression of the order parameter due to the applied current gives rise to an additional temperature dependence of the hotspot-sustaining current in the extreme vicinity of the transition temperature. (orig.)

The impact of Cyclone Nargis on the Ayeyarwady (Irrawaddy) River delta shoreline and nearshore zone (Myanmar): Towards degraded delta resilience?

Science.gov (United States)

Besset, Manon; Anthony, Edward J.; Dussouillez, Philippe; Goichot, Marc

2017-10-01

The Ayeyarwady River delta (Myanmar) is exposed to tropical cyclones, of which the most devastating has been cyclone Nargis (2-4 May 2008). We analysed waves, flooded area, nearshore suspended sediments, and shoreline change from satellite images. Suspended sediment concentrations up to 40% above average during the cyclone may reflect fluvial mud supply following heavy rainfall and wave reworking of shoreface mud. Massive recession of the high-water line resulted from backshore flooding by cyclone surge. The shoreline showed a mean retreat of 47 m following Nargis. Erosion was stronger afterwards (-148 m between August 2008 and April 2010), largely exceeding rates prior to Nargis (2000-2005: -2.14 m/year) and over 41 years (1974-2015: -0.62 m/year). This implies that resilience was weak following cyclone impact. Consequently, the increasingly more populous Ayeyarwady delta, rendered more and more vulnerable by decreasing fluvial sediment supply, could, potentially, become more severely impacted by future high-energy events.

Hotspots of species richness, threat and endemism for terrestrial vertebrates in SW Europe

Science.gov (United States)

Pascual, López-López; Luigi, Maiorano; Alessandra, Falcucci; Emilio, Barba; Luigi, Boitani

2011-09-01

The Mediterranean basin, and the Iberian Peninsula in particular, represent an outstanding "hotspot" of biological diversity with a long history of integration between natural ecosystems and human activities. Using deductive distribution models, and considering both Spain and Portugal, we downscaled traditional range maps for terrestrial vertebrates (amphibians, breeding birds, mammals and reptiles) to the finest possible resolution with the data at hand, and we identified hotspots based on three criteria: i) species richness; ii) vulnerability, and iii) endemism. We also provided a first evaluation of the conservation status of biodiversity hotspots based on these three criteria considering both existing and proposed protected areas (i.e., Natura 2000). For the identification of hotspots, we used a method based on the cumulative distribution functions of species richness values. We found no clear surrogacy among the different types of hotspots in the Iberian Peninsula. The most important hotspots (considering all criteria) are located in the western and southwestern portions of the study area, in the Mediterranean biogeographical region. Existing protected areas are not specifically concentrated in areas of high species richness, with only 5.2% of the hotspots of total richness being currently protected. The Natura 2000 network can potentially constitute an important baseline for protecting vertebrate diversity in the Iberian Peninsula although further improvements are needed. We suggest taking a step forward in conservation planning in the Mediterranean basin, explicitly considering the history of the region as well as its present environmental context. This would allow moving from traditional reserve networks (conservation focused on "patterns") to considerations about the "processes" that generated present biodiversity.

FREQUENCY ANALYSIS OF MODIS NDVI TIME SERIES FOR DETERMINING HOTSPOT OF LAND DEGRADATION IN MONGOLIA

Directory of Open Access Journals (Sweden)

E. Nasanbat

2018-04-01

Full Text Available This study examines MODIS NDVI satellite imagery time series can be used to determine hotspot of land degradation area in whole Mongolia. The trend statistical analysis of Mann-Kendall was applied to a 16-year MODIS NDVI satellite imagery record, based on 16-day composited temporal data (from May to September for growing seasons and from 2000 to 2016. We performed to frequency analysis that resulting NDVI residual trend pattern would enable successful determined of negative and positive changes in photo synthetically health vegetation. Our result showed that negative and positive values and generated a map of significant trends. Also, we examined long-term of meteorological parameters for the same period. The result showed positive and negative NDVI trends concurred with land cover types change representing an improve or a degrade in vegetation, respectively. Also, integrated the climate parameters which were precipitation and air temperature changes in the same time period seem to have had an affecting on huge NDVI trend area. The time series trend analysis approach applied successfully determined hotspot of an improvement and a degraded area due to land degradation and desertification.

Frequency Analysis of Modis Ndvi Time Series for Determining Hotspot of Land Degradation in Mongolia

Science.gov (United States)

Nasanbat, E.; Sharav, S.; Sanjaa, T.; Lkhamjav, O.; Magsar, E.; Tuvdendorj, B.

2018-04-01

This study examines MODIS NDVI satellite imagery time series can be used to determine hotspot of land degradation area in whole Mongolia. The trend statistical analysis of Mann-Kendall was applied to a 16-year MODIS NDVI satellite imagery record, based on 16-day composited temporal data (from May to September) for growing seasons and from 2000 to 2016. We performed to frequency analysis that resulting NDVI residual trend pattern would enable successful determined of negative and positive changes in photo synthetically health vegetation. Our result showed that negative and positive values and generated a map of significant trends. Also, we examined long-term of meteorological parameters for the same period. The result showed positive and negative NDVI trends concurred with land cover types change representing an improve or a degrade in vegetation, respectively. Also, integrated the climate parameters which were precipitation and air temperature changes in the same time period seem to have had an affecting on huge NDVI trend area. The time series trend analysis approach applied successfully determined hotspot of an improvement and a degraded area due to land degradation and desertification.