Sample records for shape tree regeneration

  1. A Metric on Phylogenetic Tree Shapes. (United States)

    Colijn, C; Plazzotta, G


    The shapes of evolutionary trees are influenced by the nature of the evolutionary process but comparisons of trees from different processes are hindered by the challenge of completely describing tree shape. We present a full characterization of the shapes of rooted branching trees in a form that lends itself to natural tree comparisons. We use this characterization to define a metric, in the sense of a true distance function, on tree shapes. The metric distinguishes trees from random models known to produce different tree shapes. It separates trees derived from tropical versus USA influenza A sequences, which reflect the differing epidemiology of tropical and seasonal flu. We describe several metrics based on the same core characterization, and illustrate how to extend the metric to incorporate trees' branch lengths or other features such as overall imbalance. Our approach allows us to construct addition and multiplication on trees, and to create a convex metric on tree shapes which formally allows computation of average tree shapes. © The Author(s) 2017. Published by Oxford University Press, on behalf of the Society of Systematic Biologists.

  2. Strategic plans for the Hardwood Tree Improvement and Regeneration Center (United States)

    Charles H. Michler; Keith E. Woeste


    The mission of the Hardwood Tree Improvement and Regeneration Center (HTIRC) at Purdue University is to advance the science of hardwood tree improvement and genomics in the central hardwood region of the United States by: developing and disseminating knowledge on improving the genetic quality of hardwood tree species; conserving fine hardwood germplasm; developing...

  3. Reversing a tree regeneration crisis in an endangered ecoregion. (United States)

    Fischer, Joern; Stott, Jenny; Zerger, Andre; Warren, Garth; Sherren, Kate; Forrester, Robert I


    Global food demand is growing rapidly. Livestock grazing can provide a valuable source of protein, but conventional grazing is often unsustainable. We studied an 800,000-ha section of a threatened ecoregion in southeastern Australia. Conventional management in the region involves continuous livestock grazing with few rest periods and regular fertilizer application. By using remotely sensed data on tree cover and extensive field data on livestock grazing regimes, soil chemistry, tree diameters, and tree regeneration, we show that the region is facing a tree regeneration crisis. Under conventional management, across the region, millions of hectares of land currently supporting tens of millions of trees will be treeless within decades from now. This would have severe negative ramifications for biodiversity and key ecosystem services, including water infiltration and shade provision for livestock. However, we identified an unexpected win-win solution for tree regeneration and commercial grazing. A relatively new practice in the region is fast-rotational grazing, characterized by prolonged rest periods in between short, intensive grazing events. The probability of regeneration under fast-rotational grazing was up to 4-fold higher than under conventional grazing, and it did not differ significantly from the probability of regeneration in ungrazed areas. In addition, trees were more likely to regenerate where soil nutrient levels were low. These findings suggest that the tree regeneration crisis can be reversed by applying low-input, fast-rotational grazing. New policy settings supporting these practices could signal a turning point for the region, from ecological decline to ecological recovery.

  4. Tree regeneration following group selection harvesting in southern Indiana (United States)

    Dale R. Weigel; George R. Parker


    An increased interest in the use of group selection harvesting in the Central Hardwood forests has emphasized the lack of scientific information about species response under this uneven-aged management system. Tree regeneration response following group selection harvesting was studied on thirty-six group selection openings on the Naval Surface Warfare Center, Crane...

  5. Toward a theory of statistical tree-shape analysis

    DEFF Research Database (Denmark)

    Feragen, Aasa; Lo, Pechin Chien Pau; de Bruijne, Marleen


    In order to develop statistical methods for shapes with a tree-structure, we construct a shape space framework for tree-shapes and study metrics on the shape space. This shape space has singularities, which correspond to topological transitions in the represented trees. We study two closely relat...

  6. Composition and abundance of tree regeneration (United States)

    Todd F. Hutchinson; Elaine Kennedy Sutherland; Charles T. Scott


    The composition and abundance of tree seedlings and saplings in the four study areas in southern Ohio were related to soil moisture via a GIS-derived integrated moisture index and to soil texture and fertility. For seedlings, the total abundance of small stems (less than 30 cm tall) was significantly greater on xeric plots (81,987/ha) than on intermediate (54,531/ha)...

  7. Automated Decision Tree Classification of Corneal Shape (United States)

    Twa, Michael D.; Parthasarathy, Srinivasan; Roberts, Cynthia; Mahmoud, Ashraf M.; Raasch, Thomas W.; Bullimore, Mark A.


    Purpose The volume and complexity of data produced during videokeratography examinations present a challenge of interpretation. As a consequence, results are often analyzed qualitatively by subjective pattern recognition or reduced to comparisons of summary indices. We describe the application of decision tree induction, an automated machine learning classification method, to discriminate between normal and keratoconic corneal shapes in an objective and quantitative way. We then compared this method with other known classification methods. Methods The corneal surface was modeled with a seventh-order Zernike polynomial for 132 normal eyes of 92 subjects and 112 eyes of 71 subjects diagnosed with keratoconus. A decision tree classifier was induced using the C4.5 algorithm, and its classification performance was compared with the modified Rabinowitz–McDonnell index, Schwiegerling’s Z3 index (Z3), Keratoconus Prediction Index (KPI), KISA%, and Cone Location and Magnitude Index using recommended classification thresholds for each method. We also evaluated the area under the receiver operator characteristic (ROC) curve for each classification method. Results Our decision tree classifier performed equal to or better than the other classifiers tested: accuracy was 92% and the area under the ROC curve was 0.97. Our decision tree classifier reduced the information needed to distinguish between normal and keratoconus eyes using four of 36 Zernike polynomial coefficients. The four surface features selected as classification attributes by the decision tree method were inferior elevation, greater sagittal depth, oblique toricity, and trefoil. Conclusions Automated decision tree classification of corneal shape through Zernike polynomials is an accurate quantitative method of classification that is interpretable and can be generated from any instrument platform capable of raw elevation data output. This method of pattern classification is extendable to other classification

  8. Constructal tree-shaped flow structures

    International Nuclear Information System (INIS)

    Bejan, A.; Lorente, S.


    This paper is an introduction to a new trend in the conceptual design of energy systems: the generation of flow configuration based on the 'constructal' principle that the global performance is maximized by balancing and arranging the various flow resistances (the irreversibilities) in a flow system that is free to morph. The paper focuses on distribution and collection, which are flows that connect one point (source, or sink) with an infinity of points (volume, area, curve). The flow configurations that emerge from this principle are tree-shaped, and the systems that employ them are 'vascularized'. The paper traces the most recent progress made on constructal vascularization. The direction is from large-scale applications toward microscales. The large-scale tree-shaped designs of electric power distribution systems and networks for natural gas and water are now invading small-scale designs such as fuel cells, heat exchangers and cooled packages of electronics. These flow configurations have several properties in common: freedom to morph, multiple scales, hierarchy, nonuniform (optimal) distribution of scales through the available volume, compactness and finite complexity

  9. The Hardwood Tree Improvement and Regeneration Center: its strategic plans for sustaining the hardwood resource (United States)

    Charles H. Michler; Michael J. Bosela; Paula M. Pijut; Keith E. Woeste


    A regional center for hardwood tree improvement, genomics, and regeneration research, development and technology transfer will focus on black walnut, black cherry, northern red oak and, in the future, on other fine hardwoods as the effort is expanded. The Hardwood Tree Improvement and Regeneration Center (HTIRC) will use molecular genetics and genomics along with...

  10. Tree Regeneration in Church Forests of Ethiopia: Effects of Microsites and Management

    NARCIS (Netherlands)

    Wassie Eshete, A.; Sterck, F.J.; Teketay, D.; Bongers, F.


    Tree regeneration is severely hampered in the fragmented afromontane forests of northern Ethiopia. We explored how trees regenerate in remnant forests along the gradient from open field, forest edge to closed sites and canopy gaps inside the forest. We investigated the effects of seed sowing, litter

  11. Ten year regeneration of southern Appalachian hardwood clearcuts after controlling residual trees (United States)

    P.M. Zaldivar-Garcia; D.T. Tew


    Two upland hardwood stands were clearcut in 1978 and three treatments to control the unmerchantable and/or cull trees were applied. The treatments applied to the residual trees were chainsaw felling, herbicide injection, and a control, where residual trees were left standing. Regeneration was sampled 10 years after the cutting.

  12. Nitrogen-fixing trees inhibit growth of regenerating Costa Rican rainforests. (United States)

    Taylor, Benton N; Chazdon, Robin L; Bachelot, Benedicte; Menge, Duncan N L


    More than half of the world's tropical forests are currently recovering from human land use, and this regenerating biomass now represents the largest carbon (C)-capturing potential on Earth. How quickly these forests regenerate is now a central concern for both conservation and global climate-modeling efforts. Symbiotic nitrogen-fixing trees are thought to provide much of the nitrogen (N) required to fuel tropical secondary regrowth and therefore to drive the rate of forest regeneration, yet we have a poor understanding of how these N fixers influence the trees around them. Do they promote forest growth, as expected if the new N they fix facilitates neighboring trees? Or do they suppress growth, as expected if competitive inhibition of their neighbors is strong? Using 17 consecutive years of data from tropical rainforest plots in Costa Rica that range from 10 y since abandonment to old-growth forest, we assessed how N fixers influenced the growth of forest stands and the demographic rates of neighboring trees. Surprisingly, we found no evidence that N fixers facilitate biomass regeneration in these forests. At the hectare scale, plots with more N-fixing trees grew slower. At the individual scale, N fixers inhibited their neighbors even more strongly than did nonfixing trees. These results provide strong evidence that N-fixing trees do not always serve the facilitative role to neighboring trees during tropical forest regeneration that is expected given their N inputs into these systems.

  13. Fluid Flow in a Porous Tree-Shaped Network


    Miguel, A. F.


    Tree-shaped flow networks connect one point to an infinity of points and are everywhere in Nature. These networks often own minimal flow resistance and vessel sizes obey to scaling power-laws. In this paper presents a model for fluid flow through a tree-shaped network with porous tubes. Hagen–Poiseuille flow is assumed for tubes and Darcy flow for the porous wall.

  14. Shapes of tree representations of spin-glass landscapes

    International Nuclear Information System (INIS)

    Hordijk, Wim; Fontanari, Jose F; Stadler, Peter F


    Much of the information about the multi-valley structure of disordered spin systems can be convened in a simple tree structure - a barrier tree - the leaves and internal nodes of which represent, respectively, the local minima and the lowest energy saddles connecting those minima. Here we apply several statistics used in the study of phylogenetic trees to barrier trees that result from the energy landscapes of p-spin models. These statistics give information about the shape of these barrier trees, in particular about balance and symmetry. We then ask if they can be used to classify different types of landscapes, compare them with results obtained from random trees, and investigate the structure of subtrees of the barrier trees. We conclude that at least one of the used statistics is capable of distinguishing different types of landscapes, that the barrier trees from p-spin energy landscapes are quite different from random trees, and that subtrees of barrier trees do not reflect the overall tree structure, but their structure is correlated with their 'depth' in the tree

  15. Tree Species Identity Shapes Earthworm Communities

    DEFF Research Database (Denmark)

    Schelfhout, Stephanie; Mertens, Jan; Verheyen, Kris


    Earthworms are key organisms in forest ecosystems because they incorporate organic material into the soil and affect the activity of other soil organisms. Here, we investigated how tree species affect earthworm communities via litter and soil characteristics. In a 36-year old common garden...... of soil and foliar litter, and determined the forest floor turnover rate and the density and biomass of the earthworm species occurring in the stands. Tree species significantly affected earthworm communities via leaf litter and/or soil characteristics. Anecic earthworms were abundant under Fraxinus, Acer...

  16. Disentangling the effects of shrubs and herbivores on tree regeneration in a dry Chaco forest (Argentina). (United States)

    Tálamo, Andrés; Barchuk, Alicia H; Garibaldi, Lucas A; Trucco, Carlos E; Cardozo, Silvana; Mohr, Federico


    Successful persistence of dry forests depends on tree regeneration, which depends on a balance of complex biotic interactions. In particular, the relative importance and interactive effects of shrubs and herbivores on tree regeneration are unclear. In a manipulative study, we investigated if thornless shrubs have a direct net effect, an indirect positive effect mediated by livestock, and/or an indirect negative effect mediated by small vertebrates on tree regeneration of two key species of Chaco forest (Argentina). In a spatial association study, we also explored the existence of net positive interactions from thorny and thornless shrubs. The number of Schinopsis lorentzii seedlings was highest under artificial shade with native herbivores and livestock excluded. Even excluding livestock, no seedlings were found with natural conditions (native herbivores present with natural shade or direct sunlight) at the end of the experiment. Surprisingly, seedling recruitment was not enhanced under thornless shrubs, because there was a complementary positive effect of shade and interference. Moreover, thornless shrubs had neither positive nor negative effects on regeneration of S. lorentzii. Regeneration of Aspidosperma quebracho-blanco was minimal in all treatments. In agreement with the experiment, spatial distributions of saplings of both tree species were independent of thornless shrubs, but positively associated with thorny shrubs. Our results suggest that in general thornless shrubs may have a negligible effect and thorny shrubs a net positive effect on tree regeneration in dry forests. These findings provide a conceptual framework for testing the impact of biotic interactions on seedling recruitment in other dry forests.

  17. Contrasting natural regeneration and tree planting in fourteen North American cities (United States)

    David J. Nowak


    Field data from randomly located plots in 12 cities in the United States and Canada were used to estimate the proportion of the existing tree population that was planted or occurred via natural regeneration. In addition, two cities (Baltimore and Syracuse) were recently re-sampled to estimate the proportion of newly established trees that were planted. Results for the...

  18. Tree Regeneration Under Different Land-Use Mosaics in the Brazilian Amazon's "Arc of Deforestation". (United States)

    Do Vale, Igor; Miranda, Izildinha Souza; Mitja, Danielle; Grimaldi, Michel; Nelson, Bruce Walker; Desjardins, Thierry; Costa, Luiz Gonzaga Silva


    We studied the tree-regeneration patterns in three distinct agricultural settlements in the Eastern Amazon to test the influence of land-use mosaics. The following questions are addressed: are the floristic structure and composition of regenerating trees affected by the various land-use types applied in the agricultural settlements? Do tree-regeneration patterns respond similarly to distinct land-use mosaics? Is there a relationship between tree regeneration and soil characteristics among the land-use types? The regeneration was inventoried at 45 sampling points in each settlement. At each sampling point, fourteen soil variables were analyzed. Nine different land-use types were considered. The floristic structure and composition of the settlements showed differences in the density of individuals and species and high species heterogeneity among the land-use types. The maximum Jaccard similarity coefficient found between land-use types was only 29%. Shade-tolerant species were the most diverse functional group in most land-use types, including pasture and annual crops, ranging from 91% of the number of species in the conserved and exploited forests of Travessão 338-S to 53% in the invaded pastures of Maçaranduba. The land-use types influenced significantly the floristic structure and composition of regenerating trees in two agricultural settlements, but not in third the settlement, which had greater forest cover. This finding demonstrates that the composition of each land-use mosaic, established by different management approaches, affects regeneration patterns. Tree regeneration was related to soil characteristics in all mosaics. Preparation of the area by burning was most likely the determining factor in the differences in soil characteristics between forests and agricultural areas.

  19. Tree Species Identity Shapes Earthworm Communities

    Directory of Open Access Journals (Sweden)

    Stephanie Schelfhout


    Full Text Available Earthworms are key organisms in forest ecosystems because they incorporate organic material into the soil and affect the activity of other soil organisms. Here, we investigated how tree species affect earthworm communities via litter and soil characteristics. In a 36-year old common garden experiment, replicated six times over Denmark, six tree species were planted in blocks: sycamore maple (Acer pseudoplatanus, beech (Fagus sylvatica, ash (Fraxinus excelsior, Norway spruce (Picea abies, pedunculate oak (Quercus robur and lime (Tilia cordata. We studied the chemical characteristics of soil and foliar litter, and determined the forest floor turnover rate and the density and biomass of the earthworm species occurring in the stands. Tree species significantly affected earthworm communities via leaf litter and/or soil characteristics. Anecic earthworms were abundant under Fraxinus, Acer and Tilia, which is related to calcium-rich litter and low soil acidification. Epigeic earthworms were indifferent to calcium content in leaf litter and were shown to be mainly related to soil moisture content and litter C:P ratios. Almost no earthworms were found in Picea stands, likely because of the combined effects of recalcitrant litter, low pH and low soil moisture content.

  20. Floristic Composition, Tree Canopy Structure and Regeneration in a ...

    African Journals Online (AJOL)

    Trees were the predominant plant form with 46 species (172 trees ha-1) while 7 shrubs, 15 lianas, 13 herbs, 1 grass and 1 fern species were recorded. Tree basal area and total volume were 10.29±0.88 m2 ha-1 and 22.43±1.85 m3 ha-1 respectively. The tallest tree height (35m) was recorded for Terminalia superba while ...

  1. Tree regeneration by seed in bottomland hardwood forests: A review (United States)

    Kroschel, Whitney A.; King, Sammy L.; Keim, Richard F.


    Bottomland hardwood forests (BLH) are found in temperate, humid regions of the southeastern US, primarily on alluvial floodplains adjacent to rivers. Altered hydrology in rivers and floodplains has caused changes in stand development and species composition of BLHs. We hypothesize that the driving mechanisms behind these changes are related to the regeneration process because of the complexity of recruitment and the vulnerability of species at that age in development. Here we review the state of our understanding regarding BLH regeneration, and identify potential bottlenecks throughout the stages of seed production, seed dispersal, germination, establishment, and survival. Our process-level understanding of regeneration by seed in BLHs is rudimentary, thus limiting our ability to predict the effects of hydrologic alterations on species composition. By focusing future research on the appropriate stages of regeneration, we can better understand the sources of forest-community transitions across the diverse range of BLH systems.

  2. Global variation in woodpecker species richness shaped by tree availability

    DEFF Research Database (Denmark)

    Ilsoe, Sigrid Kistrup; Kissling, W. Daniel; Fjeldsa, Jon


    . Location: Global. Methods: We used spatial and non-spatial regressions to test for relationships between broad-scale woodpecker species richness and predictor variables describing current and deep-time availability of trees, current climate, Quaternary climate change, human impact, topographical...... a negative indirect effect on woodpecker species richness. Main conclusions: Global species richness of woodpeckers is primarily shaped by current tree cover and precipitation, reflecting a strong biotic association between woodpeckers and trees. Human influence can have a negative effect on woodpecker....... As an example, woodpeckers (Picidae) are closely associated with trees and woody habitats because of multiple morphological and ecological specializations. In this study, we test whether this strong biotic association causes woodpecker diversity to be closely linked to tree availability at a global scale...

  3. Timber tree regeneration along abandoned logging roads in a tropical Bolivian forest

    DEFF Research Database (Denmark)

    Nabe-Nielsen, J.; Severiche, W.; Fredericksen, T.


    Sustainable management of selectively logged tropical forests requires that felled trees are replaced through increased recruitment and growth. This study compares road track and roadside regeneration with regeneration in unlogged and selectively logged humid tropical forest in north-eastern Boli......Sustainable management of selectively logged tropical forests requires that felled trees are replaced through increased recruitment and growth. This study compares road track and roadside regeneration with regeneration in unlogged and selectively logged humid tropical forest in north......-eastern Bolivia. Some species benefited from increased light intensities on abandoned logging roads. Others benefited from low densities of competing vegetation on roads with compacted soils. This was the case for the small-seeded species Ficus boliviana C.C. Berg and Terminalia oblonga (Ruiz & Pav.) Steud. Some...

  4. [Population structure and regeneration strategy of relict deciduous broadleaved trees on Mount Tianmu, Zhejiang Province, China. (United States)

    Shang, Kan Kan; Chen, Bo; Da, Liang Jun


    The population structure, regeneration ways and spatial relationships of six relict deci-duous broadleaved trees were examined based on community investigation on Mount Tianmu, East China. The results showed that relict deciduous broadleaved trees had a strong ability of vegetative reproduction and their population structure was generally belonged to intermittent type. Some relict species such as Cyclocarya paliurus and Liquidamb aracalycina regenerated discontinuously at appropriate sites via long-distance diffusion. Some species such as Emmenoptery henryi and Euptelea pleiospermum regenerated discontinuously around mature trees due to habitat limitation and frequent disturbance. After occupying forest gaps by seedling regeneration, C. paliurus, L. acalycina, Nyssasinensis and Liquidambar formosana could recruit and form multi-stemmed individuals by their inherent sprouting ability at relatively stable sites such as crest slope and side slope. At riverbed, valley slope and head hollow, recognized as unstable habitats, Emmenopterys henryi, E. pleiospermum, and L. formosana could also recruit by strong sprouting ability due to sparse seedlings and individual loss incurred by disturbance. Therefore, the relict deciduous broadleaved trees could be classified into two ecological species groups (repairment species for forest gap and supplement species for special habitat) based on spatial distribution and strategy of regeneration and competition. We suggested that the protection of special habitats of their communities should be strengthened.

  5. Tree regeneration response to the group selection method in southern Indiana (United States)

    Dale R. Weigel; George R. Parker


    Tree regeneration response following the use of the group selection method was studied within 36 group openings on the Naval Surface Warfare Center, Crane Division in south central Indiana. Two different aspects and three time periods since cutting were examined. The objectives were to determine whether aspect, age, species group, location within the opening, or their...

  6. Disturbance Level Determines the Regeneration of Commercial Tree Species in the Eastern Amazon

    NARCIS (Netherlands)

    Schwartz, G.; Lopes, J.C.; Kanashiro, M.; Mohren, G.M.J.; Pena Claros, M.


    The effects of reduced-impact logging (RIL) on the regeneration of commercial tree species were investigated, as long-term timber yields depend partly on the availability of seedlings in a managed forest. On four occasions during a 20-month period in the Tapajós National Forest (Eastern Amazon,

  7. Tree regeneration following drought- and insect-induced mortality in piñon-juniper woodlands. (United States)

    Redmond, Miranda D; Barger, Nichole N


    Widespread piñon (Pinus edulis) mortality occurred across the southwestern USA during 2002-2003 in response to drought and bark beetle infestations. Given the recent mortality and changes in regional climate over the past several decades, there is a keen interest in post-mortality regeneration dynamics in piñon-juniper woodlands. Here, we examined piñon and Utah juniper (Juniperus osteosperma) recruitment at 30 sites across southwestern Colorado, USA that spanned a gradient of adult piñon mortality levels (10-100%) to understand current regeneration dynamics. Piñon and juniper recruitment was greater at sites with more tree and shrub cover. Piñon recruitment was more strongly facilitated than juniper recruitment by trees and shrubs. New (post-mortality) piñon recruitment was negatively affected by recent mortality. However, mortality had no effect on piñon advanced regeneration (juveniles established pre-mortality) and did not shift juvenile piñon dominance. Our results highlight the importance of shrubs and juniper trees for the facilitation of piñon establishment and survival. Regardless of adult piñon mortality levels, areas with low tree and shrub cover may become increasingly juniper dominated as a result of the few suitable microsites for piñon establishment and survival. In areas with high piñon mortality and high tree and shrub cover, our results suggest that piñon is regenerating via advanced regeneration. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

  8. Tree fern trunks facilitate seedling regeneration in a productive lowland temperate rain forest. (United States)

    Gaxiola, Aurora; Burrows, Larry E; Coomes, David A


    Seedling regeneration on forest floors is often impaired by competition with established plants. In some lowland temperate rain forests, tree fern trunks provide safe sites on which tree species establish, and grow large enough to take root in the ground and persist. Here we explore the competitive and facilitative effects of two tree fern species, Cyathea smithii and Dicksonia squarrosa, on the epiphytic regeneration of tree species in nutrient-rich alluvial forests in New Zealand. The difficulties that seedlings have in establishing on vertical tree fern trunks were indicated by the following observations. First, seedling abundance was greatest on the oldest sections of tree fern trunks, near the base, suggesting that trunks gradually recruited more and more seedlings over time, but many sections of trunk were devoid of seedlings, indicating the difficulty of establishment on a vertical surface. Second, most seedlings were from small-seeded species, presumably because smaller seeds can easily lodge on tree fern trunks. Deer browsing damage was observed on 73% of epiphytic seedlings growing within 2 m of the ground, whereas few seedlings above that height were browsed. This suggests that tree ferns provide refugia from introduced deer, and may slow the decline in population size of deer-preferred species. We reasoned that tree ferns would compete with epiphytic seedlings for light, because below the tree fern canopy photosynthetically active radiation (PAR) was about 1% of above-canopy PAR. Frond removal almost tripled %PAR on the forest floor, leading to a significant increase in the height growth rate (HGR) of seedlings planted on the forest floor, but having no effects on the HGRs of epiphytic seedlings. Our study shows evidence of direct facilitative interactions by tree ferns during seedling establishment in plant communities associated with nutrient-rich soils.

  9. Afforestation, restoration and regeneration -- Not all trees are created equal (United States)

    Shaneka Lawson; Charles H. Michler


    Undulations in weather patterns have caused climate shifts of increased frequency and duration around the world. The need for additional research and model data on this pressing problem has resulted in a plethora of research groups examining a particular tree species or biome for negative effects of climate change. This review aims to (1) collect and merge recent...

  10. Elliptic Fourier analysis of crown shapes in Quercus petraea trees

    Directory of Open Access Journals (Sweden)

    Ovidiu Hâruţa


    Full Text Available Shape is a fundamental morphological descriptor, significant in taxonomic research as well as in ecomorphology, one method of estimation being from digitally processed images. In the present study, were analysed shapes of Q. petraea crowns, pertaining to five different stem diameter classes, from three similar stands. Based on measurements on terrestrial digital vertical photos, crown size analysis was performed and correlations between crown and stem variables were tested. Linear regression equations between crown volumes and dbh, and crown volumes and stem volumes were derived, explaining more than half of data variability. Employment of elliptic Fourier analysis (EFA, a powerful analysis tool, permitted the extraction of the mean shape from crowns, characterized by high morphological variability. The extracted, most important, coefficients were used to reconstruct the average shape of the crowns, using Inverse Fourier Transform. A mean shape of the crown, corresponding to stand conditions in which competition is added as influential shaping factor, aside genetic program of the species, is described for each stem diameter class. Crown regions with highest shape variability, from the perspective of stage developmentof the trees, were determined. Accordingly, the main crown shape characteristics are: crown elongation, mass center, asymmetry with regard to the main axis, lateral regions symmetrical and asymmetrical variations.

  11. Elliptic Fourier analysis of crown shapes in Quercus petraea trees

    Directory of Open Access Journals (Sweden)

    Ovidiu Hâruţa


    Full Text Available Shape is a fundamental morphological descriptor, significant in taxonomic research as well as in ecomorphology, one method of estimation being from digitally processed images. In the present study, were analysed shapes of Q. petraea crowns, pertaining to five different stem diameter classes, from three similar stands. Based on measurements on terrestrial digital vertical photos, crown size analysis was performed and correlations between crown and stem variables were tested. Linear regression equations between crown volumes and dbh, and crown volumes and stem volumes were derived, explaining more than half of data variability. Employment of elliptic Fourier analysis (EFA, a powerful analysis tool, permitted the extraction of the mean shape from crowns, characterized by high morphological variability. The extracted, most important, coefficients were used to reconstruct the average shape of the crowns, using Inverse Fourier Transform. A mean shape of the crown, corresponding to stand conditions in which competition is added as influential shaping factor, aside genetic program of the species, is described for each stem diameter class. Crown regions with highest shape variability, from the perspective of stage development of the trees, were determined. Accordingly, the main crown shape characteristics are: crown elongation, centroid position, asymmetry with regard to the main axis, lateral regions symmetrical and asymmetrical variations. 

  12. Fabrication of custom-shaped grafts for cartilage regeneration. (United States)

    Koo, Seungbum; Hargreaves, Brian A; Gold, Garry E; Dragoo, Jason L


    to create a custom-shaped graft through 3D tissue shape reconstruction and rapid-prototype molding methods using MRI data, and to test the accuracy of the custom-shaped graft against the original anatomical defect. An iatrogenic defect on the distal femur was identified with a 1.5 Tesla MRI and its shape was reconstructed into a three-dimensional (3D) computer model by processing the 3D MRI data. First, the accuracy of the MRI-derived 3D model was tested against a laser-scan based 3D model of the defect. A custom-shaped polyurethane graft was fabricated from the laser-scan based 3D model by creating custom molds through computer aided design and rapid-prototyping methods. The polyurethane tissue was laser-scanned again to calculate the accuracy of this process compared to the original defect. The volumes of the defect models from MRI and laser-scan were 537 mm3 and 405 mm3, respectively, implying that the MRI model was 33% larger than the laser-scan model. The average (±SD) distance deviation of the exterior surface of the MRI model from the laser-scan model was 0.4 ± 0.4 mm. The custom-shaped tissue created from the molds was qualitatively very similar to the original shape of the defect. The volume of the custom-shaped cartilage tissue was 463 mm3 which was 15% larger than the laser-scan model. The average (±SD) distance deviation between the two models was 0.04 ± 0.19 mm. This investigation proves the concept that custom-shaped engineered grafts can be fabricated from standard sequence 3-D MRI data with the use of CAD and rapid-prototyping technology. The accuracy of this technology may help solve the interfacial problem between native cartilage and graft, if the grafts are custom made for the specific defect. The major source of error in fabricating a 3D custom-shaped cartilage graft appears to be the accuracy of a MRI data itself; however, the precision of the model is expected to increase by the utilization of advanced MR sequences with higher magnet

  13. Tree shelters and other methods for reducing deer damage to hardwood regeneration in the eastern United States (United States)

    Gary W. Miller


    This report summarizes the basic silvicultural problems associated with regenerating commercial hardwood (broadleaf) species in the eastern United States and includes a review of current methods used to reduce the impact of deer browsing. The following topics are discussed: 1) the biological requirements and regeneration mechanism associated with several important tree...

  14. Comparing single-tree selection, group selection, and clearcutting for regenerating oaks and pines in the Missouri Ozarks (United States)

    Randy G. Jensen; John M. Kabrick


    In the Missouri Ozarks, there is considerable concern about the effectiveness of the uneven-aged methods of single-tree selection and group selection for oak (Quercus L.) and shortleaf pine (Pinus echinata Mill.) regeneration. We compared the changes in reproduction density of oaks and pine following harvesting by single-tree...

  15. Natural regeneration of trees in three types of afforested stands in the Taihang Mountains, China.

    Directory of Open Access Journals (Sweden)

    Xitian Yang

    Full Text Available Natural regeneration is the natural process by which plants replace themselves. It is a cost-effective way to re-establish vegetation, and it helps to preserve genetic identity and diversity. In this study, we investigated the natural regeneration of trees in three types of afforested stands in the Taihang Mountains, China, which were dominated by Robinia pseudoacacia (black locust, Quercus variabilis (Chinese cork oak and Platycladus orientalis (Chinese arborvitae respectively. A consistent pattern was found among the three types of stands, being that the density of seedlings was positively correlated with the overstory canopy cover and negatively correlated with the covers of shrub, herb and litter layers. While a positive correlation between the density of seedlings and stand age was found for the conifer stands, negative correlations were found for the two types of broadleaf stands. Correlations between the density of saplings and the stand attributes were not consistent among the three types of stands. The two types of broadleaf stands had higher densities of seedlings and saplings than the conifer stands. While the broadleaf stands had adequate recruits for regeneration, the conifer stands did not have enough recruits. Our findings suggest that the overstory canopy should be prevented from being disturbed, any reduction of the canopy cover will decrease the recruits and affect the regeneration.

  16. Fire severity filters regeneration traits to shape community assembly in Alaska's boreal forest.

    Directory of Open Access Journals (Sweden)

    Teresa N Hollingsworth

    Full Text Available Disturbance can both initiate and shape patterns of secondary succession by affecting processes of community assembly. Thus, understanding assembly rules is a key element of predicting ecological responses to changing disturbance regimes. We measured the composition and trait characteristics of plant communities early after widespread wildfires in Alaska to assess how variations in disturbance characteristics influenced the relative success of different plant regeneration strategies. We compared patterns of post-fire community composition and abundance of regeneration traits across a range of fire severities within a single pre-fire forest type- black spruce forests of Interior Alaska. Patterns of community composition, as captured by multivariate ordination with nonmetric multidimensional scaling, were primarily related to gradients in fire severity (biomass combustion and residual vegetation and secondarily to gradients in soil pH and regional climate. This pattern was apparent in both the full dataset (n = 87 sites and for a reduced subset of sites (n = 49 that minimized the correlation between site moisture and fire severity. Changes in community composition across the fire-severity gradient in Alaska were strongly correlated to variations in plant regeneration strategy and rooting depth. The tight coupling of fire severity with regeneration traits and vegetation composition after fire supports the hypothesis that disturbance characteristics influence patterns of community assembly by affecting the relative success of different regeneration strategies. This study further demonstrated that variations in disturbance characteristics can dominate over environmental constraints in determining early patterns of community assembly. By affecting the success of regeneration traits, changes in fire regime directly shape the outcomes of community assembly, and thus may override the effects of slower environmental change on boreal forest

  17. 3D printing of composite tissue with complex shape applied to ear regeneration

    International Nuclear Information System (INIS)

    Lee, Jung-Seob; Hong, Jung Min; Jung, Jin Woo; Shim, Jin-Hyung; Cho, Dong-Woo; Oh, Jeong-Hoon


    In the ear reconstruction field, tissue engineering enabling the regeneration of the ear's own tissue has been considered to be a promising technology. However, the ear is known to be difficult to regenerate using traditional methods due to its complex shape and composition. In this study, we used three-dimensional (3D) printing technology including a sacrificial layer process to regenerate both the auricular cartilage and fat tissue. The main part was printed with poly-caprolactone (PCL) and cell-laden hydrogel. At the same time, poly-ethylene-glycol (PEG) was also deposited as a sacrificial layer to support the main structure. After complete fabrication, PEG can be easily removed in aqueous solutions, and the procedure for removing PEG has no effect on the cell viability. For fabricating composite tissue, chondrocytes and adipocytes differentiated from adipose-derived stromal cells were encapsulated in hydrogel to dispense into the cartilage and fat regions, respectively, of ear-shaped structures. Finally, we fabricated the composite structure for feasibility testing, satisfying expectations for both the geometry and anatomy of the native ear. We also carried out in vitro assays for evaluating the chondrogenesis and adipogenesis of the cell-printed structure. As a result, the possibility of ear regeneration using 3D printing technology which allowed tissue formation from the separately printed chondrocytes and adipocytes was demonstrated. (paper)

  18. Self-fitting shape memory polymer foam inducing bone regeneration: A rabbit femoral defect study. (United States)

    Xie, Ruiqi; Hu, Jinlian; Hoffmann, Oskar; Zhang, Yuanchi; Ng, Frankie; Qin, Tingwu; Guo, Xia


    Although tissue engineering has been attracted greatly for healing of critical-sized bone defects, great efforts for improvement are still being made in scaffold design. In particular, bone regeneration would be enhanced if a scaffold precisely matches the contour of bone defects, especially if it could be implanted into the human body conveniently and safely. In this study, polyurethane/hydroxyapatite-based shape memory polymer (SMP) foam was fabricated as a scaffold substrate to facilitate bone regeneration. The minimally invasive delivery and the self-fitting behavior of the SMP foam were systematically evaluated to demonstrate its feasibility in the treatment of bone defects in vivo. Results showed that the SMP foam could be conveniently implanted into bone defects with a compact shape. Subsequently, it self-matched the boundary of bone defects upon shape-recovery activation in vivo. Micro-computed tomography determined that bone ingrowth initiated at the periphery of the SMP foam with a constant decrease towards the inside. Successful vascularization and bone remodeling were also demonstrated by histological analysis. Thus, our results indicate that the SMP foam demonstrated great potential for bone regeneration. Copyright © 2018 Elsevier B.V. All rights reserved.

  19. Regeneration (United States)

    George A. Schier; Wayne D. Shepperd; John R. Jones


    There are basically two approaches to regenerating aspen stands-sexual reproduction using seed, or vegetative regeneration by root suckering. In the West, root suckering is the most practical method. The advantage of having an existing, well established root system capable of producing numerous root suckers easily outweighs natural or artificial reforestation in the...


    Directory of Open Access Journals (Sweden)

    Hesti L. Tata


    Full Text Available The rubber  agroforests  (RAF  of Indonesia provide  a dynamic interface  between natural  processes  of forest  regeneration and  human’s management   targeting  the harvesting  of latex  with  minimum investment  of time  and financial  resources.  The composition  and species richness  of higher  plants  across an intensification gradient from forest to monocultures of tree crops have been investigated  in six land use types (viz. secondary forest, RAF, rubber monoculture, oil palm plantation, cassava field and Imperata grassland  in Bungo,  Jambi  Province,  Indonesia.  We emphasize  comparison of four different  strata  (understory, seedling,  sapling  and tree of vegetation  between forest and RAF,  with  specific interest  in plant  dependence  on ectomycorrhiza fungi. Species richness  and species accumulation curves for seedling  and sapling  stages were similar  between forest and RAF,  but in the tree stratum  (trees > 10 cm dbh selective thinning by farmers was evident in a reduction  of species diversity and an increase in the proportion of trees with edible parts. Very few trees dependent on ectomycorrhiza fungi were encountered  in the RAF. However, the relative distribution of early and late successional species as evident from the wood density distribution showed no difference between RAF and forest.

  1. Tree Regeneration Spatial Patterns in Ponderosa Pine Forests Following Stand-Replacing Fire: Influence of Topography and Neighbors

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    Justin P. Ziegler


    Full Text Available Shifting fire regimes alter forest structure assembly in ponderosa pine forests and may produce structural heterogeneity following stand-replacing fire due, in part, to fine-scale variability in growing environments. We mapped tree regeneration in eighteen plots 11 to 15 years after stand-replacing fire in Colorado and South Dakota, USA. We used point pattern analyses to examine the spatial pattern of tree locations and heights as well as the influence of tree interactions and topography on tree patterns. In these sparse, early-seral forests, we found that all species were spatially aggregated, partly attributable to the influence of (1 aspect and slope on conifers; (2 topographic position on quaking aspen; and (3 interspecific attraction between ponderosa pine and other species. Specifically, tree interactions were related to finer-scale patterns whereas topographic effects influenced coarse-scale patterns. Spatial structures of heights revealed conspecific size hierarchies with taller trees in denser neighborhoods. Topography and heterospecific tree interactions had nominal effect on tree height spatial structure. Our results demonstrate how stand-replacing fires create heterogeneous forest structures and suggest that scale-dependent, and often facilitatory, rather than competitive, processes act on regenerating trees. These early-seral processes will establish potential pathways of stand development, affecting future forest dynamics and management options.

  2. Impact of wind-induced microsites and disturbance severity on tree regeneration patterns: Results from the first post-storm decade (United States)

    Floor Vodde; Kalev Jogiste; Jeroen Engelhart; Lee E. Frelich; W. Keith Moser; Alan Sims; Marek Metslaid


    In two hemiboreal mixed spruce-hardwood forests in north-east Estonia, we studied (1) which factors affect tree regeneration survival and development during the first post-storm decade and (2) how these effects change in time. Regeneration height and mortality of the tree species black alder (Alnus glutinosa (L.) J. Gaertn.), birch (Betula pendula Roth., Betula...

  3. Tree regeneration and future stand development after bark beetle infestation and harvesting in Colorado lodgepole pine stands (United States)

    Byron J. Collins; Charles C. Rhoades; Robert M. Hubbard; Michael A. Battaglia


    In the southern Rocky Mountains, current mountain pine beetle (Dendroctonus ponderosae Hopkins) outbreaks and associated harvesting have set millions of hectares of lodgepole pine (Pinus contorta var. latifolia Engelm. ex Wats.) forest onto new stand development trajectories. Information about immediate, post-disturbance tree regeneration will provide insight on...

  4. Tree species richness, diversity, and regeneration status in different oak (Quercus spp. dominated forests of Garhwal Himalaya, India

    Directory of Open Access Journals (Sweden)

    Sushma Singh


    Full Text Available Himalayan forests are dominated by different species of oaks (Quercus spp. at different altitudes. These oaks are intimately linked with hill agriculture as they protect soil fertility, watershed, and local biodiversity. They also play an important role in maintaining ecosystem stability. This work was carried out to study the diversity and regeneration status of some oak forests in Garhwal Himalaya, India. A total of 18 tree species belonging to 16 genera and 12 families were reported from the study area. Species richness varied for trees (4–7, saplings (3–10, and seedlings (2–6. Seedling and sapling densities (Ind/ha varied between 1,376 Ind/ha and 9,600 Ind/ha and 167 Ind/ha and 1,296 Ind/ha, respectively. Species diversity varied from 1.27 to 1.86 (trees, from 0.93 to 3.18 (saplings, and from 0.68 to 2.26 (seedlings. Total basal area (m2/ha of trees and saplings was 2.2–87.07 m2/ha and 0.20–2.24 m2/ha, respectively, whereas that of seedlings varied from 299 cm2/ha to 8,177 cm2/ha. Maximum tree species (20–80% had “good” regeneration. Quercus floribunda, the dominant tree species in the study area, showed “poor” regeneration, which is a matter of concern, and therefore, proper management and conservation strategies need to be developed for maintenance and sustainability of this oak species along with other tree species that show poor or no regeneration.

  5. Regeneration of five commercially-valuable tree species after experimental logging in an Amazonian forest

    Directory of Open Access Journals (Sweden)

    Lima Albertina Pimentel


    Full Text Available This study investigated the regeneration variation of five commercially valuable tree species in relation to different intensities of felling in fourteen 4-ha plots in an area under experimental forest management. This experiment was carried out in a typical Amazonian tropical forest sample on "terra-firme," in Manaus (AM. Plots were logged 7 and 8 years (1987 and 1988, or 3 years (1993 before the study. All trees with height greater than 2 m, and diameter at breast height (DBH smaller than 10 cm were measured. Only Aniba hostmanniana, Ocotea aciphylla, Licaria pachycarpa, Eschweilera coriacea and Goupia glabra were sufficiently common for individual analyses. These species have high timber values in the local market. Eight years after logging, the species responded differently to logging intensities. The numbers of individuals of Goupia glabra and Aniba hostmanniana were positively related to the intensity of logging, while Ocotea aciphylla, Licaria pachycarpa, and Eschweilera coriacea showed no statistically significant response. In the most recently (1993 logged areas, Goupia glabra and Aniba hostmanniana had higher numbers of individuals than the control plots.

  6. Elliptic Fourier analysis of crown shapes in Quercus petraea trees


    Ovidiu Hâruţa


    Shape is a fundamental morphological descriptor, significant in taxonomic research as well as in ecomorphology, one method of estimation being from digitally processed images. In the present study, were analysed shapes of Q. petraea crowns, pertaining to five different stem diameter classes, from three similar stands. Based on measurements on terrestrial digital vertical photos, crown size analysis was performed and correlations between crown and stem variables were tested. Linear regression ...

  7. Metrics for comparing neuronal tree shapes based on persistent homology.

    Directory of Open Access Journals (Sweden)

    Yanjie Li

    Full Text Available As more and more neuroanatomical data are made available through efforts such as NeuroMorpho.Org and, the need to develop computational tools to facilitate automatic knowledge discovery from such large datasets becomes more urgent. One fundamental question is how best to compare neuron structures, for instance to organize and classify large collection of neurons. We aim to develop a flexible yet powerful framework to support comparison and classification of large collection of neuron structures efficiently. Specifically we propose to use a topological persistence-based feature vectorization framework. Existing methods to vectorize a neuron (i.e, convert a neuron to a feature vector so as to support efficient comparison and/or searching typically rely on statistics or summaries of morphometric information, such as the average or maximum local torque angle or partition asymmetry. These simple summaries have limited power in encoding global tree structures. Based on the concept of topological persistence recently developed in the field of computational topology, we vectorize each neuron structure into a simple yet informative summary. In particular, each type of information of interest can be represented as a descriptor function defined on the neuron tree, which is then mapped to a simple persistence-signature. Our framework can encode both local and global tree structure, as well as other information of interest (electrophysiological or dynamical measures, by considering multiple descriptor functions on the neuron. The resulting persistence-based signature is potentially more informative than simple statistical summaries (such as average/mean/max of morphometric quantities-Indeed, we show that using a certain descriptor function will give a persistence-based signature containing strictly more information than the classical Sholl analysis. At the same time, our framework retains the efficiency associated with treating neurons as

  8. Re-establishment of hummock topography promotes tree regeneration on highly disturbed moderate-rich fens. (United States)

    Lieffers, Victor J; Caners, Richard T; Ge, Hangfei


    Winter exploration of oil sands deposits underlying wooded fens mostly eliminates the hummock-hollow topography on drilling pads and the ice roads leading to them, after their abandonment in spring. Recovery of black spruce (Picea mariana (P. Mill.) B.S.P.) and tamarack (Larix laricina (Du Roi) K. Koch) on these disturbed peatlands is thought to depend on the recovery of hummock topography. In late winter, numerous large blocks of frozen peat (1.5 × 1.5 m) were lifted out of the flattened drilling pads and positioned beside their excavated hollows; this was done on six temporary pads. Four years later, the condition of the mounds and the regeneration of conifers from natural seed dispersal were assessed on these elevated mounds compared to adjacent flattened areas of the pads. Then, conifer seedling density was more than five times higher on elevated spots than the mostly flat, flood-prone areas between them, and seedling density was positively related to mound height and strength of seed source. Higher mounds tended to have larger seedlings. Mounds on some of the pads were heavily eroded down; these pads had peat with higher humification, and operationally these pads were also treated in late winter when peat was thawing and fractured into pieces during mound construction. Developing a large volume of elevated substrate that persists until natural hummock-forming mosses can establish is thought necessary for tree recruitment and the recovery of the habitat for the threatened woodland caribou of this region. Copyright © 2017 Elsevier Ltd. All rights reserved.

  9. Capturing spiral radial growth of conifers using the superellipse to model tree-ring geometric shape. (United States)

    Shi, Pei-Jian; Huang, Jian-Guo; Hui, Cang; Grissino-Mayer, Henri D; Tardif, Jacques C; Zhai, Li-Hong; Wang, Fu-Sheng; Li, Bai-Lian


    Tree-rings are often assumed to approximate a circular shape when estimating forest productivity and carbon dynamics. However, tree rings are rarely, if ever, circular, thereby possibly resulting in under- or over-estimation in forest productivity and carbon sequestration. Given the crucial role played by tree ring data in assessing forest productivity and carbon storage within a context of global change, it is particularly important that mathematical models adequately render cross-sectional area increment derived from tree rings. We modeled the geometric shape of tree rings using the superellipse equation and checked its validation based on the theoretical simulation and six actual cross sections collected from three conifers. We found that the superellipse better describes the geometric shape of tree rings than the circle commonly used. We showed that a spiral growth trend exists on the radial section over time, which might be closely related to spiral grain along the longitudinal axis. The superellipse generally had higher accuracy than the circle in predicting the basal area increment, resulting in an improved estimate for the basal area. The superellipse may allow better assessing forest productivity and carbon storage in terrestrial forest ecosystems.


    Directory of Open Access Journals (Sweden)

    V. M. Rotari


    Full Text Available Tree-shaped plants of tomato have many useful traits, which gain them advantages over common tomato forms. In world plant collection there are over 200 accessions, cultivars and hybrids of tree-shaped tomato. The aim of the study was to develop new initial tomato accessions for breeding program for tree-shaped cultivars and hybrids that are distinguished by a shape, fruit weight and color, improved by interspecific hybridization chemical composition and resistance to the major diseases. The tree-shaped breeding lines: ‘196/12’, ‘374/08’, ‘909/14’, ‘911/14’ and other were observed with the use of interspecific hybridization and selection in the population F2-F4. The selected lines passed the trial in artificially infected condition with Alternaria, viral diseases (MToV, TSWV and phytoplasmas. Among breeding lines assessed the ‘911/14’, ‘374/08’ and‘40/11’ were less affected by complex of pathogens. The lines ‘196/12’ and ‘909/14’ passed an assessment in the nursery for variety trial in naturally and  provocatively infected conditions with major pathogens. Both breeding lines had an advantage over standard accession ‘Laguna’ and ‘Maraphon’ for total yield capacity and standard fruit harvest; it was more by 9.6% and 52.2% and 9.5% and 53.4% respectively. Fruits of lines 196/12 and 909/14 had good taste quality with high content of dry matter (5.8% and 6.8%, sugars (3.3% and 3.1%, vitamin C (22.2 and 24.8 mg/100 grams. The selected tree-shaped accessions have been used to develop heterotic hybrids and to be sources of economically valuable traits.

  11. Molecular identification and characterization of the pyruvate decarboxylase gene family associated with latex regeneration and stress response in rubber tree. (United States)

    Long, Xiangyu; He, Bin; Wang, Chuang; Fang, Yongjun; Qi, Jiyan; Tang, Chaorong


    In plants, ethanolic fermentation occurs not only under anaerobic conditions but also under aerobic conditions, and involves carbohydrate and energy metabolism. Pyruvate decarboxylase (PDC) is the first and the key enzyme of ethanolic fermentation, which branches off the main glycolytic pathway at pyruvate. Here, four PDC genes were isolated and identified in a rubber tree, and the protein sequences they encode are very similar. The expression patterns of HbPDC4 correlated well with tapping-simulated rubber productivity in virgin rubber trees, indicating it plays an important role in regulating glycometabolism during latex regeneration. HbPDC1, HbPDC2 and HbPDC3 had striking expressional responses in leaves and bark to drought, low temperature and high temperature stresses, indicating that the HbPDC genes are involve in self-protection and defense in response to various abiotic and biotic stresses during rubber tree growth and development. To understand ethanolic fermentation in rubber trees, it will be necessary to perform an in-depth study of the regulatory pathways controlling the HbPDCs in the future. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

  12. Self-constructed tree-shape high thermal conductivity nanosilver networks in epoxy. (United States)

    Pashayi, Kamyar; Fard, Hafez Raeisi; Lai, Fengyuan; Iruvanti, Sushumna; Plawsky, Joel; Borca-Tasciuc, Theodorian


    We report the formation of high aspect ratio nanoscale tree-shape silver networks in epoxy, at low temperatures (thermal conductivity (κ) of the nanocomposite compared to the polymer matrix. The networks form through a three-step process comprising of self-assembly by diffusion limited aggregation of polyvinylpyrrolidone (PVP) coated nanoparticles, removal of PVP coating from the surface, and sintering of silver nanoparticles in high aspect ratio networked structures. Controlling self-assembly and sintering by carefully designed multistep temperature and time processing leads to κ of our silver nanocomposites that are up to 300% of the present state of the art polymer nanocomposites at similar volume fractions. Our investigation of the κ enhancements enabled by tree-shaped network nanocomposites provides a basis for the development of new polymer nanocomposites for thermal transport and storage applications.

  13. Ligament regeneration using an absorbable stent-shaped poly-L-lactic acid scaffold in a rabbit model. (United States)

    Nishimoto, Hanako; Kokubu, Takeshi; Inui, Atsuyuki; Mifune, Yutaka; Nishida, Kotaro; Fujioka, Hiroyuki; Yokota, Kumiko; Hiwa, Chiaki; Kurosaka, Masahiro


    Ligaments are frequently damaged in sports activities and trauma, and severe ligament injury can lead to joint instability and osteoarthritis. In this study, we aimed to regenerate the medial collateral ligament (MCL) using an absorbable stent-shaped poly-L-lactic acid (PLLA) scaffold in a rabbit model to examine the biocompatibility and mechanical properties. Twenty-three Japanese white rabbits were used in this study. MCL defects were surgically created in the knee joints and then reconstructed using stent-shaped PLLA scaffolds. As controls, flexor digitorum longus (FDL) tendons were implanted into the contralateral knees. Seven rabbits were sacrificed at three time points, conducted four, eight and 16 weeks after the operation. The regenerated tissues were histologically evaluated using fibre alignment scoring, morphology of fibroblast scoring and immunohistochemical analysis of types I and III collagen. The regenerated tissues were also biomechanically evaluated by measuring the ultimate failure load and stiffness. At four weeks post-operation, spindle-shaped cells were observed on the inside of the scaffolds. At eight weeks, maturation of the regenerated tissues and collagen fibre alignment parallel to the ligaments was observed. At 16 weeks, the fibre alignment had become denser. The fibre alignment and morphology of fibroblast scores significantly increased in a time-dependent manner. Expression of type I collagen was more strongly observed in the scaffold group at eight and 16 weeks post-operation than at four weeks. Type III collagen was also observed at four, eight and 16 weeks post-operation. A thin layer of fibrocartilage was observed at the ligament-bone junction at eight and 16 weeks. The ultimate failure load of the scaffold group was 46.7 ± 20.7 N, 66.5 ± 11.0 N and 74.3 ± 11.5 N at four, eight and 16 weeks post-operation, respectively. There was no statistical difference between the normal MCL and the scaffold group at 16 weeks post

  14. Somatic Embryogenesis Induction and Plant Regeneration in Strawberry Tree (Arbutus unedo L.). (United States)

    Martins, João F; Correia, Sandra I; Canhoto, Jorge M


    Somatic embryogenesis is a powerful tool both for cloning and studies of genetic transformation and embryo development. Most protocols for somatic embryogenesis induction start from zygotic embryos or embryonic-derived tissues which do not allow the propagation of elite trees. In the present study, a reliable protocol for somatic embryogenesis induction from adult trees of strawberry tree is described. Leaves from in vitro proliferating shoots were used to induce somatic embryo formation on a medium containing an auxin and a cytokinin. Somatic embryos germinated in a plant growth regulator-free medium.

  15. Spatial distribution and functional significance of leaf lamina shape in Amazonian forest trees

    Directory of Open Access Journals (Sweden)

    A. C. M. Malhado


    Full Text Available Leaves in tropical forests come in an enormous variety of sizes and shapes, each of which can be ultimately viewed as an adaptation to the complex problem of optimising the capture of light for photosynthesis. However, the fact that many different shape "strategies" coexist within a habitat demonstrate that there are many other intrinsic and extrinsic factors involved, such as the differential investment in support tissues required for different leaf lamina shapes. Here, we take a macrogeographic approach to understanding the function of different lamina shape categories. Specifically, we use 106 permanent plots spread across the Amazon rainforest basin to: 1 describe the geographic distribution of some simple metrics of lamina shape in plots from across Amazonia, and; 2 identify and quantify relationships between key environmental parameters and lamina shape in tropical forests. Because the plots are not randomly distributed across the study area, achieving this latter objective requires the use of statistics that can account for spatial auto-correlation. We found that between 60–70% of the 2791 species and 83 908 individual trees in the dataset could be classified as having elliptic leaves (= the widest part of the leaf is on an axis in the middle fifth of the long axis of the leaf. Furthermore, the average Amazonian tree leaf is 2.5 times longer than it is wide and has an entire margin. Contrary to theoretical expectations we found little support for the hypothesis that narrow leaves are an adaptation to dry conditions. However, we did find strong regional patterns in leaf lamina length-width ratios and several significant correlations with precipitation variables suggesting that water availability may be exerting an as yet unrecognised selective pressure on leaf shape of rainforest trees. Some support was found for the hypothesis that narrow leaves are an adaptation to low nutrient soils. Furthermore, we found a strong correlation between

  16. Effects of variable retention harvesting on natural tree regeneration in Pinus resinosa (red pine) forests (United States)

    Margaret W. Roberts; Anthony W. D' Amato; Christel C. Kern; Brian J. Palik


    Concerns over loss of ecosystem function and biodiversity in managed forests have led to the development of silvicultural approaches that meet ecological goals as well as sustain timber production. Variable Retention Harvest (VRH) practices, which maintain mature overstory trees across harvested areas, have been suggested as an approach to balance these objectives;...

  17. High solar radiation hinders tree regeneration above the alpine treeline in northern Ecuador

    NARCIS (Netherlands)

    Bader, M.; Geloof, van I.; Rietkerk, M.


    Many tropical alpine treelines lie below their climatic potential, because of natural or anthropogenic causes. Forest extension above the treeline depends on the ability of trees to establish in the alpine environment. This ability may be limited by different factors, such as low temperatures,

  18. High solar radiation hinders tree regeneration above the alpine treeline in northern Ecuador

    NARCIS (Netherlands)

    Bader, M.Y.; Geloof, I. van; Rietkerk, M.G.


    Many tropical alpine treelines lie below their climatic potential, because of natural or anthropogenic causes. Forest extension above the treeline depends on the ability of trees to establish in the alpine environment. This ability may be limited by different factors, such as low

  19. Whole-tree clearcutting in New England: manager's guide to impacts on soils, streams, and regeneration (United States)

    Robert S. Pierce; James W. Hornbeck; Wayne C. Martin; Louise M. Tritton; Tattersall C. Smith; Anthony C. Federer; Harry W. Yawney


    Studies of impacts of whole-tree clearcutting in spruce-fir, northern hardwood, and central hardwood forest types are summarized for use by practicing foresters, land managers, environmental protection agencies and organizations, and the general public. Guidelines are given for protecting soils, stream water quality, nutrient cycles, and site productivity.

  20. Constructal tree-shaped two-phase flow for cooling a surface

    Energy Technology Data Exchange (ETDEWEB)

    Zamfirescu, C.; Bejan, A. [Duke University, Durham, NC (United States). Dept. of Mechanical Engineering and Materials Science


    This paper documents the strong relation that exists between the changing architecture of a complex flow system and the maximization of global performance under constraints. The system is a surface with uniform heating per unit area, which is cooled by a network with evaporating two-phase flow. Illustrations are based on the design of the cooling network for a skating rink. The flow structure is optimized as a sequence of building blocks, which starts with the smallest (elemental volume of fixed size), and continues with assemblies of stepwise larger sizes (first construct, second construct, etc.). The optimized flow network is tree shaped. Three features of the elemental volume are optimized: the cross-sectional shape, the elemental tube diameter, and the shape of the elemental area viewed from above. The tree that emerges at larger scales is optimized for minimal amount of header material and fixed pressure drop. The optimal number of constituents in each new (larger) construct decreases as the size and complexity of the construct increase. Constructs of various levels of complexity compete: the paper shows how to select the optimal flow structure subject to fixed size (cooled surface), pressure drop and amount of header material. (author)

  1. Contrasting regeneration strategies in climax and long-lived pioneer tree species in a subtropical forest.

    Directory of Open Access Journals (Sweden)

    Haiyang Wang

    Full Text Available 1: This study investigated 15 coexisting dominant species in a humid subtropical evergreen broad-leaved forest in southwest China, consisting of long-lived pioneers and climax species occurring in natural and disturbed regimes. The authors hypothesized that there would be non-tradeoff scaling relationships between sprouting and seed size among species, with the aim of uncovering the ecological relationship between plant sprouting and seed characteristics in the two functional groups. 2: The sprouting variations of the species were initially examined using pairwise comparisons between natural and disturbed habitats within and across species and were noted to show a continuum in persistence niches across the forest dominants, which may underlie the maintenance of plant diversity. Second, a significantly positive, rather than tradeoff, relationship between sprout number and seed size across species within each of the two functional groups was observed, and an obvious elevational shift with a common slope among the two groups in their natural habitat was examined. The results indicate the following: 1 the relationship of seed size vs. sprouts in the natural habitat is more likely to be bet-hedging among species within a guild in a forest; 2 climax species tend to choose seeding rather than sprouting regeneration, and vice versa for the long-lived pioneers; and 3 the negative correlation between sprouting and seed dispersal under disturbed conditions may imply a tradeoff between dispersal and persistence in situ during the process of plant regeneration. 3: These findings may be of potential significance for urban greening using native species.

  2. Recognizing human actions by learning and matching shape-motion prototype trees. (United States)

    Jiang, Zhuolin; Lin, Zhe; Davis, Larry S


    A shape-motion prototype-based approach is introduced for action recognition. The approach represents an action as a sequence of prototypes for efficient and flexible action matching in long video sequences. During training, an action prototype tree is learned in a joint shape and motion space via hierarchical K-means clustering and each training sequence is represented as a labeled prototype sequence; then a look-up table of prototype-to-prototype distances is generated. During testing, based on a joint probability model of the actor location and action prototype, the actor is tracked while a frame-to-prototype correspondence is established by maximizing the joint probability, which is efficiently performed by searching the learned prototype tree; then actions are recognized using dynamic prototype sequence matching. Distance measures used for sequence matching are rapidly obtained by look-up table indexing, which is an order of magnitude faster than brute-force computation of frame-to-frame distances. Our approach enables robust action matching in challenging situations (such as moving cameras, dynamic backgrounds) and allows automatic alignment of action sequences. Experimental results demonstrate that our approach achieves recognition rates of 92.86 percent on a large gesture data set (with dynamic backgrounds), 100 percent on the Weizmann action data set, 95.77 percent on the KTH action data set, 88 percent on the UCF sports data set, and 87.27 percent on the CMU action data set.

  3. Support, shape and number of replicate samples for tree foliage analysis. (United States)

    Luyssaert, Sebastiaan; Mertens, Jan; Raitio, Hannu


    Many fundamental features of a sampling program are determined by the heterogeneity of the object under study and the settings for the error (alpha), the power (beta), the effect size (ES), the number of replicate samples, and sample support, which is a feature that is often overlooked. The number of replicates, alpha, beta, ES, and sample support are interconnected. The effect of the sample support and its shape on the required number of replicate samples was investigated by means of a resampling method. The method was applied to a simulated distribution of Cd in the crown of a Salix fragilis L. tree. Increasing the dimensions of the sample support results in a decrease in the variance of the element concentration under study. Analysis of the variance is often the foundation of statistical tests, therefore, valid statistical testing requires the use of a fixed sample support during the experiment. This requirement might be difficult to meet in time-series analyses and long-term monitoring programs. Sample supports have their largest dimension in the direction with the largest heterogeneity, i.e. the direction representing the crown height, and this will give more accurate results than supports with other shapes. Taking the relationships between the sample support and the variance of the element concentrations in tree crowns into account provides guidelines for sampling efficiency in terms of precision and costs. In terms of time, the optimal support to test whether the average Cd concentration of the crown exceeds a threshold value is 0.405 m3 (alpha = 0.05, beta = 0.20, ES = 1.0 mg kg(-1) dry mass). The average weight of this support is 23 g dry mass, and 11 replicate samples need to be taken. It should be noted that in this case the optimal support applies to Cd under conditions similar to those of the simulation, but not necessarily all the examinations for this tree species, element, and hypothesis test.

  4. Climate change-induced water stress suppresses the regeneration of the critically endangered forest tree Nyssa yunnanensis. (United States)

    Zhang, Shanshan; Kang, Hongmei; Yang, Wenzhong


    Climatic change-induced water stress has been found to threaten the viability of trees, especially endangered species, through inhibiting their recruitment. Nyssa yunnanensis, a plant species with extremely small populations (PSESP), consists of only two small populations of eight mature individuals remaining in southwestern China. In order to determine the barriers to regeneration, both in situ and laboratory experiments were performed to examine the critical factors hindering seed germination and seedling establishment. The results of in situ field experiments demonstrated that soil water potentials lower than -5.40 MPa (experienced in December) had significantly inhibitory effects on seedling survival, and all seedlings perished at a soil water potential of -5.60 MPa (January). Laboratory experiments verified that N. yunnanensis seedlings could not survive at a 20% PEG 6000 concentration (-5.34 MPa) or 1/5 water-holding capacity (WHC; -5.64 MPa), and seed germination was inhibited in the field from September (-1.10 MPa) to November (-4.30 MPa). Our results suggested that soil water potentials between -5.34 and -5.64 MPa constituted the range of soil water potentials in which N. yunnanensis seedlings could not survive. In addition to water deficit, intensified autotoxicity, which is concentration-dependent, resulted in lower seed germination and seedling survival. Thus, seed establishment was probably simultaneously impacted by water deficit and aggravated autotoxicity. Meteorological records from the natural distribution areas of N. yunnanensis indicated that mean annual rainfall and relative humidity have declined by 21.7% and 6.3% respectively over past 55 years, while the temperature has increased by 6.0%. Climate change-induced drought, along with a poor resistance and adaptability to drought stress, has severely impacted the natural regeneration of N. yunnanensis. In conclusion, climate change-induced drought has been implicated as a regulating factor in

  5. Influence of Removal of a Non-native Tree Species Mimosa caesalpiniifolia Benth. on the Regenerating Plant Communities in a Tropical Semideciduous Forest Under Restoration in Brazil (United States)

    Podadera, Diego S.; Engel, Vera L.; Parrotta, John A.; Machado, Deivid L.; Sato, Luciane M.; Durigan, Giselda


    Exotic species are used to trigger facilitation in restoration plantings, but this positive effect may not be permanent and these species may have negative effects later on. Since such species can provide a marketable product (firewood), their harvest may represent an advantageous strategy to achieve both ecological and economic benefits. In this study, we looked at the effect of removal of a non-native tree species ( Mimosa caesalpiniifolia) on the understory of a semideciduous forest undergoing restoration. We assessed two 14-year-old plantation systems (modified "taungya" agroforestry system; and mixed plantation using commercial timber and firewood tree species) established at two sites with contrasting soil properties in São Paulo state, Brazil. The experimental design included randomized blocks with split plots. The natural regeneration of woody species (height ≥0.2 m) was compared between managed (all M. caesalpiniifolia trees removed) and unmanaged plots during the first year after the intervention. The removal of M. caesalpiniifolia increased species diversity but decreased stand basal area. Nevertheless, the basal area loss was recovered after 1 year. The management treatment affected tree species regeneration differently between species groups. The results of this study suggest that removal of M. caesalpiniifolia benefited the understory and possibly accelerated the succession process. Further monitoring studies are needed to evaluate the longer term effects on stand structure and composition. The lack of negative effects of tree removal on the natural regeneration indicates that such interventions can be recommended, especially considering the expectations of economic revenues from tree harvesting in restoration plantings.

  6. Wide variety of flower-color and -shape mutants regenerated from leaf cultures irradiated with ion beams

    International Nuclear Information System (INIS)

    Okamura, M.; Yasuno, N.; Ohtsuka, M.; Tanaka, A.; Shikazono, N.; Hase, Y.


    The efficiency of ion-beam irradiation combined with tissue culture in obtaining floral mutants was investigated and compared with those of gamma rays and X-rays in carnation. Leaf segments of carnation plants in vitro were irradiated with the 220 MeV carbon ions, and cultured till the shoot regenerated. The carbon ion had the highest effect in reducing the regeneration frequency, and the RBE value with respect to gamma-rays was four. The higher mutation frequency and the wider mutation spectrum were obtained in plants irradiated with the carbon ions than low LET radiations. Three new carnation varieties developed by ion-beam irradiation were applied for the registration of the Japanese Ministry of Agriculture, Forestry and Fisheries. The results indicate that ion beam irradiation could induce wide variety of flower-color and -shape mutants, and that the combined method of ion-beam irradiation with tissue culture is useful to obtain the commercial varieties in a short time

  7. Models of regeneration, tree growth, and current and potential ranges of tree and mammal species in the Eastern U.S. (United States)

    Elaine K. Sutherland; Louis R. Iverson; Daniel A. Yaussy; Charles T. Scott; Betsy J. Hale; Anantha Prasad; Mark Schwartz; Hope R. Barrett


    An environmentally responsive, mechanistic regeneration simulator should simulate important ecological relationships and disturbance effects. Development of such a regeneration simulator is complex because of the many attributes that characterize reproductive strategies and the importance of forest history and disturbance in determining the composition of the next...

  8. A tissue engineering approach to anterior cruciate ligament regeneration using novel shaped capillary channel polymer fibers (United States)

    Sinclair, Kristofer D.


    Ruptures of the anterior cruciate ligament (ACL) are the most frequent of injuries to the knee due to its role in preventing anterior translation of the tibia. It is estimated that as many as 200,000 Americans per year will suffer from a ruptured ACL, resulting in management costs on the order of 5 billion dollars. Without treatment these patients are unable to return to normal activity, as a consequence of the joint instability found within the ACL deficient knee. Over the last thirty years, a variety of non-degradable, synthetic fibers have been evaluated for their use in ACL reconstruction; however, a widely accepted prosthesis has been unattainable due to differences in mechanical properties of the synthetic graft relative to the native tissue. Tissue engineering is an interdisciplinary field charged with the task of developing therapeutic solutions for tissue and organ failure by enhancing the natural wound healing process through the use of cellular transplants, biomaterials, and the delivery of bioactive molecules. The capillary channel polymer (CC-P) fibers used in this research were fabricated by melt extrusion from polyethylene terephthalate and polybutylene terephthalate. These fibers possess aligned micrometer scale surface channels that may serve as physical templates for tissue growth and regeneration. This inherent surface topography offers a unique and industrially viable approach for cellular contact guidance on three dimensional constructs. In this fundamental research the ability of these fiber channels to support the adhesion, alignment, and organization of fibroblasts was demonstrated and found to be superior to round fiber controls. The results demonstrated greater uniformity of seeding and accelerated formation of multi-layered three-dimensional biomass for the CC-P fibers relative to those with a circular cross-section. Furthermore, the CC-P geometry induced nuclear elongation consistent with that observed in native ACL tissue. Through the

  9. Estimation of miniature forest parameters, species, tree shape, and distance between canopies by means of Monte-Carlo based radiative transfer model with forestry surface model

    International Nuclear Information System (INIS)

    Ding, Y.; Arai, K.


    A method for estimation of forest parameters, species, tree shape, distance between canopies by means of Monte-Carlo based radiative transfer model with forestry surface model is proposed. The model is verified through experiments with the miniature model of forest, tree array of relatively small size of trees. Two types of miniature trees, ellipse-looking and cone-looking canopy are examined in the experiments. It is found that the proposed model and experimental results show a coincidence so that the proposed method is validated. It is also found that estimation of tree shape, trunk tree distance as well as distinction between deciduous or coniferous trees can be done with the proposed model. Furthermore, influences due to multiple reflections between trees and interaction between trees and under-laying grass are clarified with the proposed method

  10. The dependence of natural regeneration of forest trees on upper soil conditions and acidity at damaged sites in the Black Forest, Germany

    International Nuclear Information System (INIS)

    Littek, T.


    It was the goal of this study to investigate the influence of different upper soil conditions on the germination and establishment, as well as the growth, of young plants of various tree species. For this purpose, four test plots in the region of the Black Forest were laid out, in which, by various means of site preparation and fertilization, the upper soils were changed. Natural seeding of common spruce, European silver-fir, beech, sycamore maple, European mountainash, and grey alder was simulated by means of controlled sowing. For comparison, a greenhouse experiment was carried out, examining the germination and development of the same tree species in various soil substrata, using different fertilizers, and under the influence of artificial acid rain. The most important results - with a high level of variation depending on the tree species examined - can be summarized as follows: Based on the results of field and greenhouse experiments, as well as on the investigations of other authors, it can be concluded that natural regeneration of forest stands is considerably impeded under conditions of increasing soil acidity and by high acid depositions. This is seen directly as the result of unfavorable chemical conditions in the upper soil, as well as indirectly due to deteriorating competitiveness against other vegetation. Site preparation and lime or dolomite fertilization can be important measures in the practice of forestry, to encourage natural regeneration in highly acidic sites with an unfavourable humus layer and a high presence of competing vegetation. (orig./UWA). 2 figs., 85 tabs., 269 refs [de

  11. Variation in tree mortality and regeneration affect forest carbon recovery following fuel treatments and wildfire in the Lake Tahoe Basin, California, USA

    Directory of Open Access Journals (Sweden)

    Carlson Chris H


    Full Text Available Abstract Background Forest fuel treatments have been proposed as tools to stabilize carbon stocks in fire-prone forests in the Western U.S.A. Although fuel treatments such as thinning and burning are known to immediately reduce forest carbon stocks, there are suggestions that these losses may be paid back over the long-term if treatments sufficiently reduce future wildfire severity, or prevent deforestation. Although fire severity and post-fire tree regeneration have been indicated as important influences on long-term carbon dynamics, it remains unclear how natural variability in these processes might affect the ability of fuel treatments to protect forest carbon resources. We surveyed a wildfire where fuel treatments were put in place before fire and estimated the short-term impact of treatment and wildfire on aboveground carbon stocks at our study site. We then used a common vegetation growth simulator in conjunction with sensitivity analysis techniques to assess how predicted timescales of carbon recovery after fire are sensitive to variation in rates of fire-related tree mortality, and post-fire tree regeneration. Results We found that fuel reduction treatments were successful at ameliorating fire severity at our study site by removing an estimated 36% of aboveground biomass. Treated and untreated stands stored similar amounts of carbon three years after wildfire, but differences in fire severity were such that untreated stands maintained only 7% of aboveground carbon as live trees, versus 51% in treated stands. Over the long-term, our simulations suggest that treated stands in our study area will recover baseline carbon storage 10–35 years more quickly than untreated stands. Our sensitivity analysis found that rates of fire-related tree mortality strongly influence estimates of post-fire carbon recovery. Rates of regeneration were less influential on recovery timing, except when fire severity was high. Conclusions Our ability to predict

  12. Variation in tree mortality and regeneration affect forest carbon recovery following fuel treatments and wildfire in the Lake Tahoe Basin, California, USA. (United States)

    Carlson, Chris H; Dobrowski, Solomon Z; Safford, Hugh D


    Forest fuel treatments have been proposed as tools to stabilize carbon stocks in fire-prone forests in the Western U.S.A. Although fuel treatments such as thinning and burning are known to immediately reduce forest carbon stocks, there are suggestions that these losses may be paid back over the long-term if treatments sufficiently reduce future wildfire severity, or prevent deforestation. Although fire severity and post-fire tree regeneration have been indicated as important influences on long-term carbon dynamics, it remains unclear how natural variability in these processes might affect the ability of fuel treatments to protect forest carbon resources. We surveyed a wildfire where fuel treatments were put in place before fire and estimated the short-term impact of treatment and wildfire on aboveground carbon stocks at our study site. We then used a common vegetation growth simulator in conjunction with sensitivity analysis techniques to assess how predicted timescales of carbon recovery after fire are sensitive to variation in rates of fire-related tree mortality, and post-fire tree regeneration. We found that fuel reduction treatments were successful at ameliorating fire severity at our study site by removing an estimated 36% of aboveground biomass. Treated and untreated stands stored similar amounts of carbon three years after wildfire, but differences in fire severity were such that untreated stands maintained only 7% of aboveground carbon as live trees, versus 51% in treated stands. Over the long-term, our simulations suggest that treated stands in our study area will recover baseline carbon storage 10-35 years more quickly than untreated stands. Our sensitivity analysis found that rates of fire-related tree mortality strongly influence estimates of post-fire carbon recovery. Rates of regeneration were less influential on recovery timing, except when fire severity was high. Our ability to predict the response of forest carbon resources to anthropogenic and

  13. Trees (United States)

    Al-Khaja, Nawal


    This is a thematic lesson plan for young learners about palm trees and the importance of taking care of them. The two part lesson teaches listening, reading and speaking skills. The lesson includes parts of a tree; the modal auxiliary, can; dialogues and a role play activity.

  14. Regeneration response to midstory control following long-term single tree selection management of Southern Appalachian hardwoods (United States)

    Jason R. Lewis; John W. Groninger; David L. Loftis


    Sustainability of the single tree selection system in the mixed hardwood forests of the southern Appalachians is compromised by insufficient recruitment of oak species. In 1986, portions of a stand at Bent Creek Experimental Forest that have been under single tree selection management since 1945 were subjected to a midstory herbicide treatment in an effort to improve...

  15. The influence of variability on the optimal shape of an airway tree branching asymmetrically

    International Nuclear Information System (INIS)

    Mauroy, Benjamin; Bokov, Plamen


    The asymmetry of the bronchial tree has been reported on numerous occasions, and bronchi in the lung bifurcate most of the time into a major and a minor daughter. Asymmetry is most probably bound to play a role on the hydrodynamic resistance and volume occupation of the bronchial tree. Thus, in this work, we search for an optimal asymmetric airway tree crossed by Poiseuille flow that would be a good candidate to model the distal conductive part of the lung. The geometry is controlled by major and minor diameter reduction factors that depend on the generation. We show that the optimal asymmetric tree has diameter reduction factors that are adimensional from the second level of bifurcation and that they are highly dependent on the asymmetric ratio that defines the relative sizes of the major and minor branches in a bifurcation. This optimization also gives access to a cost function whose particularity is to be asymmetric around its minimum. Thus, the cliff-edge hypothesis predicts that if the system suffers variability, then the best tree is shifted from the optimal. We apply a recent theoretical model of cliff-edge in order to measure the role of variability on the determination of the best asymmetric tree. Then, we compare our results with lung data of the literature. In particular, we are able to quantify the variability needed to fit the data and to give hypothesis that could explain, at least partially, the shift found between the optimal tree and the measures in the case of asymmetric bronchial trees. Finally, our model predicts that, even if the population is adapted at best, there always exist individuals whose bronchial trees are associated with larger costs comparatively to the average and who ought to be more sensitive to geometrical remodeling

  16. Postdispersal seed predation and seed viability in forest soils: implications for the regeneration of tree species in Ethiopian church forests

    NARCIS (Netherlands)

    Wassie Eshete, A.; Bekele, T.; Sterck, F.J.; Teketay, D.; Bongers, F.


    Almost all dry Afromontane forests of Northern Ethiopia have been converted to agricultural, grazing or scrub lands except for small fragments left around churches ('Church forests'). Species regeneration in these forests is limited. We investigated (i) how intense postdispersal seed predation was

  17. Central-European mountain spruce (Picea abies (L.) Karst.) forests: regeneration of tree species after a bark beetle outbreak

    Czech Academy of Sciences Publication Activity Database

    Jonášová, Magda; Prach, Karel


    Roč. 23, č. 1 (2004), s. 15-27 ISSN 0925-8574 Institutional research plan: CEZ:AV0Z6087904 Keywords : forest management * mountain spruce forest * natural regeneration Subject RIV: GK - Forestry Impact factor: 0.890, year: 2004

  18. Root morphology and mycorrhizal symbioses together shape nutrient foraging strategies of temperate trees. (United States)

    Chen, Weile; Koide, Roger T; Adams, Thomas S; DeForest, Jared L; Cheng, Lei; Eissenstat, David M


    Photosynthesis by leaves and acquisition of water and minerals by roots are required for plant growth, which is a key component of many ecosystem functions. Although the role of leaf functional traits in photosynthesis is generally well understood, the relationship of root functional traits to nutrient uptake is not. In particular, predictions of nutrient acquisition strategies from specific root traits are often vague. Roots of nearly all plants cooperate with mycorrhizal fungi in nutrient acquisition. Most tree species form symbioses with either arbuscular mycorrhizal (AM) or ectomycorrhizal (EM) fungi. Nutrients are distributed heterogeneously in the soil, and nutrient-rich "hotspots" can be a key source for plants. Thus, predicting the foraging strategies that enable mycorrhizal root systems to exploit these hotspots can be critical to the understanding of plant nutrition and ecosystem carbon and nutrient cycling. Here, we show that in 13 sympatric temperate tree species, when nutrient availability is patchy, thinner root species alter their foraging to exploit patches, whereas thicker root species do not. Moreover, there appear to be two distinct pathways by which thinner root tree species enhance foraging in nutrient-rich patches: AM trees produce more roots, whereas EM trees produce more mycorrhizal fungal hyphae. Our results indicate that strategies of nutrient foraging are complementary among tree species with contrasting mycorrhiza types and root morphologies, and that predictable relationships between below-ground traits and nutrient acquisition emerge only when both roots and mycorrhizal fungi are considered together.

  19. Soil weathering agents are limited where deep tree roots are removed, even after decades of forest regeneration (United States)

    Billings, S. A.; Richter, D. D., Jr.; Hirmas, D.; Lehmeier, C.; Bagchi, S.; Brecheisen, Z.; Sullivan, P. L.; Min, K.; Hauser, E.; Stair, R.; Flournoy, R.


    Deep roots pump reduced C deep into Earth's critical zone (CZ) as they grow and function. This action generates acid-forming CO2 and organic acids (OA) and fosters microbes that also produce these weathering agents. This phenomenon results in a regolith-weathering reaction front that propagates down with vertical root extension and water infiltration. Across old-growth hardwood, younger pine, and annual crop plots at the Calhoun Critical Zone Observatory, we tested the hypothesis that persistent absence of deep roots, a widespread anthropogenic phenomenon, reduces root- and microbially-mediated biogeochemical pools and fluxes important for weathering, even well below maximum root density. We also hypothesized that land use effects on deep soil biogeochemistry is evident even after decades of forest regeneration. Root abundance to 2 m declined with depth, and was greater in old-growth and regenerating forests than in crop plots at most depths. Old-growth soils also contain more roots than younger pine soils: between 30-45 and 70-80 cm depth, old-growth root abundances were greater than in regenerating forests, and old-growth soils exhibited root distributions with less severe declines with depth and harbored more root-associated bacteria than younger forests. Changing root abundances influenced concentrations of weathering agents. At 3 m, in situ soil [CO2] reached 6%, 4%, and 2% in old-growth, regenerating, and crop soils, respectively. Soil organic C (SOC) and extractable OC (EOC, an OA proxy) did not differ across land use, but at 4-5 m EOC/SOC was higher in old-growth compared to regenerating forests and crop soils (20.0±2.6 vs. 2.0±1.0%). We suggest that biogeochemistry deep beneath old-growth forests reflects greater root prevalence and propensity for generation of weathering agents, and that disturbance regimes inducing deep root mortality impose top-down signals relevant to weathering processes deep in Earth's CZ even after decades of forest regeneration.

  20. Bottom-up versus top-down control of tree regeneration in the Bialowieza Primeval Forest, Poland

    NARCIS (Netherlands)

    Kuijper, D.P.J.; Cromsigt, J.P.G.M.; Jedrzejewska, B.A.; Miscicki, S.C.; Jedrzejewski, W.A.; Kweczlich, I.C.


    We tested the interactions between biotic and abiotic factors in structuring temperate forest communities by comparing tree recruitment after 7 years inside 30 pairs of exclosure (excluding ungulates: red deer, roe deer, bison, moose, wild boar) and control plots (7 × 7 m each) in one of the most

  1. Iron Chelators and Antioxidants Regenerate Neuritic Tree and Nigrostriatal Fibers of MPP+/MPTP-Lesioned Dopaminergic Neurons.

    Directory of Open Access Journals (Sweden)

    Pabla Aguirre

    Full Text Available Neuronal death in Parkinson's disease (PD is often preceded by axodendritic tree retraction and loss of neuronal functionality. The presence of non-functional but live neurons opens therapeutic possibilities to recover functionality before clinical symptoms develop. Considering that iron accumulation and oxidative damage are conditions commonly found in PD, we tested the possible neuritogenic effects of iron chelators and antioxidant agents. We used three commercial chelators: DFO, deferiprone and 2.2'-dypyridyl, and three 8-hydroxyquinoline-based iron chelators: M30, 7MH and 7DH, and we evaluated their effects in vitro using a mesencephalic cell culture treated with the Parkinsonian toxin MPP+ and in vivo using the MPTP mouse model. All chelators tested promoted the emergence of new tyrosine hydroxylase (TH-positive processes, increased axodendritic tree length and protected cells against lipoperoxidation. Chelator treatment resulted in the generation of processes containing the presynaptic marker synaptophysin. The antioxidants N-acetylcysteine and dymetylthiourea also enhanced axodendritic tree recovery in vitro, an indication that reducing oxidative tone fosters neuritogenesis in MPP+-damaged neurons. Oral administration to mice of the M30 chelator for 14 days after MPTP treatment resulted in increased TH- and GIRK2-positive nigra cells and nigrostriatal fibers. Our results support a role for oral iron chelators as good candidates for the early treatment of PD, at stages of the disease where there is axodendritic tree retraction without neuronal death.

  2. Determination of As in tree-rings of poplar (Populus alba L.) by U-shaped DC arc. (United States)

    Marković, D M; Novović, I; Vilotić, D; Ignjatović, Lj


    An argon-stabilized U-shaped DC arc with a system for aerosol introduction was used for determination of As in poplar (Populus alba L.) tree-rings. After optimization of the operating parameters and selection of the most appropriate signal integration time (30 s), the limit of detection for As was reduced to 15.0 ng/mL. This detection limit obtained with the optimal integration time was compared with those for other methods: inductively coupled plasma-atomic emission spectrometry (ICP-AES), direct coupled plasma-atomic emission spectrometry (DCP-AES), microwave induced plasma-atomic emission spectrometry (MIP-AES) and improved thermospray flame furnace atomic absorption spectrometry (TS-FF-AAS). Arsenic is toxic trace element which can adversely affect plant, animal and human health. As an indicator of environment pollution we collected poplar tree-rings from two locations. The first area was close to the "Nikola Tesla" (TENT-A) power plant, Obrenovac, while the other was in the urban area of Novi Sad. In all cases elevated average concentrations of As were registered in poplar tree-rings from the Obrenovac location.

  3. The shape and temporal dynamics of phylogenetic trees arising from geographic speciation. (United States)

    Pigot, Alex L; Phillimore, Albert B; Owens, Ian P F; Orme, C David L


    Phylogenetic trees often depart from the expectations of stochastic models, exhibiting imbalance in diversification among lineages and slowdowns in the rate of lineage accumulation through time. Such departures have led to a widespread perception that ecological differences among species or adaptation and subsequent niche filling are required to explain patterns of diversification. However, a key element missing from models of diversification is the geographical context of speciation and extinction. In this study, we develop a spatially explicit model of geographic range evolution and cladogenesis, where speciation arises via vicariance or peripatry, and explore the effects of these processes on patterns of diversification. We compare the results with those observed in 41 reconstructed avian trees. Our model shows that nonconstant rates of speciation and extinction are emergent properties of the apportioning of geographic ranges that accompanies speciation. The dynamics of diversification exhibit wide variation, depending on the mode of speciation, tendency for range expansion, and rate of range evolution. By varying these parameters, the model is able to capture many, but not all, of the features exhibited by birth-death trees and extant bird clades. Under scenarios with relatively stable geographic ranges, strong slowdowns in diversification rates are produced, with faster rates of range dynamics leading to constant or accelerating rates of apparent diversification. A peripatric model of speciation with stable ranges also generates highly unbalanced trees typical of bird phylogenies but fails to produce realistic range size distributions among the extant species. Results most similar to those of a birth-death process are reached under a peripatric speciation scenario with highly volatile range dynamics. Taken together, our results demonstrate that considering the geographical context of speciation and extinction provides a more conservative null model of

  4. Tree resin composition, collection behavior and selective filters shape chemical profiles of tropical bees (Apidae: Meliponini.

    Directory of Open Access Journals (Sweden)

    Sara D Leonhardt

    Full Text Available The diversity of species is striking, but can be far exceeded by the chemical diversity of compounds collected, produced or used by them. Here, we relate the specificity of plant-consumer interactions to chemical diversity applying a comparative network analysis to both levels. Chemical diversity was explored for interactions between tropical stingless bees and plant resins, which bees collect for nest construction and to deter predators and microbes. Resins also function as an environmental source for terpenes that serve as appeasement allomones and protection against predators when accumulated on the bees' body surfaces. To unravel the origin of the bees' complex chemical profiles, we investigated resin collection and the processing of resin-derived terpenes. We therefore analyzed chemical networks of tree resins, foraging networks of resin collecting bees, and their acquired chemical networks. We revealed that 113 terpenes in nests of six bee species and 83 on their body surfaces comprised a subset of the 1,117 compounds found in resins from seven tree species. Sesquiterpenes were the most variable class of terpenes. Albeit widely present in tree resins, they were only found on the body surface of some species, but entirely lacking in others. Moreover, whereas the nest profile of Tetragonula melanocephala contained sesquiterpenes, its surface profile did not. Stingless bees showed a generalized collecting behavior among resin sources, and only a hitherto undescribed species-specific "filtering" of resin-derived terpenes can explain the variation in chemical profiles of nests and body surfaces from different species. The tight relationship between bees and tree resins of a large variety of species elucidates why the bees' surfaces contain a much higher chemodiversity than other hymenopterans.

  5. Linking spatiotemporal disturbance history with tree regeneration and diversity in an old-growth forest in northern Japan

    Czech Academy of Sciences Publication Activity Database

    Altman, Jan; Fibich, Pavel; Lepš, J.; Uemura, S.; Hara, T.; Doležal, Jiří


    Roč. 21, č. 1 (2016), s. 1-13 ISSN 1433-8319 R&D Projects: GA ČR(CZ) GA14-12262S; GA ČR GAP504/12/1952; GA ČR GA13-13368S Institutional support: RVO:67985939 Keywords : Tree rings * Disturbance * Spatial pattern Subject RIV: EH - Ecology, Behaviour Impact factor: 3.123, year: 2016

  6. Influence of soil pathogens on early regeneration success of tropical trees varies between forest edge and interior. (United States)

    Krishnadas, Meghna; Comita, Liza S


    Soil fungi are key mediators of negative density-dependent mortality in seeds and seedlings, and the ability to withstand pathogens in the shaded understory of closed-canopy forests could reinforce light gradient partitioning by tree species. For four species of tropical rainforest trees-two shade-tolerant and two shade-intolerant-we conducted a field experiment to examine the interactive effects of fungal pathogens, light, and seed density on germination and early seedling establishment. In a fully factorial design, seeds were sown into 1 m 2 plots containing soil collected from underneath conspecific adult trees, with plots assigned to forest edge (high light) or shaded understory, high or low density, and fungicide or no fungicide application. We monitored total seed germination and final seedling survival over 15 weeks. Shade-intolerant species were strongly constrained by light; their seedlings survived only at the edge. Fungicide application significantly improved seedling emergence and/or survival for three of the four focal species. There were no significant interactions between fungicide and seed density, suggesting that pathogen spread with increased aggregation of seeds and seedlings did not contribute to pathogen-mediated mortality. Two species experienced significant edge-fungicide interactions, but fungicide effects in edge vs. interior forest varied with species and recruitment stage. Our results suggest that changes to plant-pathogen interactions could affect plant recruitment in human-impacted forests subject to fragmentation and edge-effects.

  7. Hypothesis: brain size and skull shape as criteria for a new hominin family tree. (United States)

    Chardin, Pierre


    Today, gorillas and chimpanzees live in tropical forests, where acid soils do not favor fossilization. It is thus widely believed that there are no fossils of chimpanzees or gorillas. However, four teeth of a 0.5-million-year (Ma)-old chimpanzee were discovered in the rift valley of Kenya (McBrearty and Jablonski, 2005), and a handful of teeth of a 10-Ma-old gorilla-like creature were found in Ethiopia (Suwa et al., 2007), close to the major sites of Homo discoveries. These discoveries indicate that chimpanzees and gorillas once shared their range with early Homo. However, the thousands of hominin fossils discovered in the past century have all been attributed to the Homo line. Thus far, our family tree looks like a bush with many dead-branches. If one admits the possibility that the australopithecines can also be the ancestors of African great apes, one can place Paranthropus on the side of gorilla ancestors and divide the remaining Australopithecus based on the brain size into the two main lines of humans and chimpanzees, thereby resulting in a coherent family tree. Copyright © 2014 Elsevier GmbH. All rights reserved.

  8. A New Minimum Trees-Based Approach for Shape Matching with Improved Time Computing: Application to Graphical Symbols Recognition (United States)

    Franco, Patrick; Ogier, Jean-Marc; Loonis, Pierre; Mullot, Rémy

    Recently we have developed a model for shape description and matching. Based on minimum spanning trees construction and specifics stages like the mixture, it seems to have many desirable properties. Recognition invariance in front shift, rotated and noisy shape was checked through median scale tests related to GREC symbol reference database. Even if extracting the topology of a shape by mapping the shortest path connecting all the pixels seems to be powerful, the construction of graph induces an expensive algorithmic cost. In this article we discuss on the ways to reduce time computing. An alternative solution based on image compression concepts is provided and evaluated. The model no longer operates in the image space but in a compact space, namely the Discrete Cosine space. The use of block discrete cosine transform is discussed and justified. The experimental results led on the GREC2003 database show that the proposed method is characterized by a good discrimination power, a real robustness to noise with an acceptable time computing.

  9. Synthesis of silver nano-materials from Grevillea robusta A Cunn (Silver-oak tree) leaves extract and shape directing role of cetyltrimethylammonium bromide

    Energy Technology Data Exchange (ETDEWEB)

    Ahmad, Rabia; Faisal, Qamer; Hussain, Sajjad [Department of Chemistry, Jamia Millia Islamia (Central University), New Delhi-110025 (India)


    Grevillea robusta (Silver-oak tree) tree is a medicinal tree. Conventional UV-visible spectrophotometric and transmission electron microscopic technique were used to determine the morphology of silver nanoplates (AgNP) using Grevillea robusta (Silver-oak tree) aqueous leaves extract for the first time. The visible spectra showed the presence of three well defined surface plasmon absorption (SPR) bands at 500, 550 and 675 nm which was attributed to the anisotropic growth of Ag-nanoplates. Transmission electron microscopic (TEM) analysis of AgNP showed formation of truncated triangular, polyhedral with some irregular shapes nanoplates in the size range 8-20 nm. Cetyltrimethylammonium bromide (CTAB) has no significant effect on the shape of the spectra, position of SPR bands, size and size distribution of AgNP.

  10. Synthesis of silver nano-materials from Grevillea robusta A Cunn (Silver-oak tree) leaves extract and shape directing role of cetyltrimethylammonium bromide

    International Nuclear Information System (INIS)

    Ahmad, Rabia; Faisal, Qamer; Hussain, Sajjad


    Grevillea robusta (Silver-oak tree) tree is a medicinal tree. Conventional UV-visible spectrophotometric and transmission electron microscopic technique were used to determine the morphology of silver nanoplates (AgNP) using Grevillea robusta (Silver-oak tree) aqueous leaves extract for the first time. The visible spectra showed the presence of three well defined surface plasmon absorption (SPR) bands at 500, 550 and 675 nm which was attributed to the anisotropic growth of Ag-nanoplates. Transmission electron microscopic (TEM) analysis of AgNP showed formation of truncated triangular, polyhedral with some irregular shapes nanoplates in the size range 8-20 nm. Cetyltrimethylammonium bromide (CTAB) has no significant effect on the shape of the spectra, position of SPR bands, size and size distribution of AgNP.

  11. Climate-driven extinctions shape the phylogenetic structure of temperate tree floras. (United States)

    Eiserhardt, Wolf L; Borchsenius, Finn; Plum, Christoffer M; Ordonez, Alejandro; Svenning, Jens-Christian


    When taxa go extinct, unique evolutionary history is lost. If extinction is selective, and the intrinsic vulnerabilities of taxa show phylogenetic signal, more evolutionary history may be lost than expected under random extinction. Under what conditions this occurs is insufficiently known. We show that late Cenozoic climate change induced phylogenetically selective regional extinction of northern temperate trees because of phylogenetic signal in cold tolerance, leading to significantly and substantially larger than random losses of phylogenetic diversity (PD). The surviving floras in regions that experienced stronger extinction are phylogenetically more clustered, indicating that non-random losses of PD are of increasing concern with increasing extinction severity. Using simulations, we show that a simple threshold model of survival given a physiological trait with phylogenetic signal reproduces our findings. Our results send a strong warning that we may expect future assemblages to be phylogenetically and possibly functionally depauperate if anthropogenic climate change affects taxa similarly. © 2015 John Wiley & Sons Ltd/CNRS.

  12. Dual-band left-handed metamaterials fabricated by using tree-shaped fractal

    International Nuclear Information System (INIS)

    Xu He-Xiu; Wang Guang-Ming; Yang Zi-Mu; Wang Jia-Fu


    A method of fabricating dual-band left-handed metematerials (LHMs) is investigated numerically and experimentally by single-sided tree-like fractals. The resulting structure features multiband magnetic resonances and two electric resonances. By appropriately adjusting the dimensions, two left-handed (LH) bands with simultaneous negative permittivity and permeability are engineered and are validated by full-wave eigenmode analysis and measurement as well in the microwave frequency range. To study the multi-resonant mechanism in depth, the LHM is analysed from three different perspectives of field distribution analysis, circuit model analysis, and geometrical parameters evaluation. The derived formulae are consistent with all simulated results and resulting electromagnetic phenomena, indicating the effectiveness of the established theory. The method provides an alternative to the design of multi-band LHM and has the advantage of not requiring two individual resonant particles and electrically continuous wires, which in turn facilitates planar design and considerably simplifies the fabrication. (electromagnetism, optics, acoustics, heat transfer, classical mechanics, and fluid dynamics)

  13. Patterns of diversity and regeneration in unmanaged moist deciduous forests in response to disturbance in Shiwalik Himalayas, India

    Directory of Open Access Journals (Sweden)

    Mukesh Kumar Gautam


    Full Text Available We studied vegetation attributes in Indian tropical moist deciduous unmanaged forests to determine the influence of forest disturbances on them. We enumerated 89 species: 72 under moderate disturbance and 54 under least disturbance. The data from 3399 stems [>5 cm diameter at breast height (dbh] decreased linearly along the disturbance gradient. The basal area was largest in least disturbed forests (61 m2/ha and smallest in intensely disturbed forest (41 m2/ha. Under least and moderate disturbance, tree density-diameter distribution had negative exponential curves, whereas highly disturbed forests had unimodal-shaped curves where a few trees 5–10 cm and >50 cm in diameter were recorded. Most tree and shrub layer species under heavy and intense disturbance had impaired regeneration. Moderate disturbance intensity thus apparently benefits species diversity, stand density, and regeneration. Decline in seedlings and saplings, especially tree species, threaten forest regeneration and the maintenance of species diversity of unmanaged tropical forests.

  14. Transference of function shapes organ identity in the dove tree inflorescence. (United States)

    Vekemans, Dries; Viaene, Tom; Caris, Pieter; Geuten, Koen


    • An important evolutionary mechanism shaping the biodiversity of flowering plants is the transfer of function from one plant organ to another. To investigate whether and how transference of function is associated with the remodeling of the floral organ identity program we studied Davidia involucrata, a species with conspicuous, petaloid bracts subtending a contracted inflorescence with reduced flowers. • A detailed ontogeny enabled the interpretation of expression patterns of B-, C- and E-class homeotic MADS-box genes using qRT-PCR and in situ hybridization techniques. We investigated protein-protein interactions using yeast two-hybrid assays. • Although loss of organs does not appear to have affected organ identity in the retained organs of the reduced flowers of D. involucrata, the bracts express the B-class TM6 (Tomato MADS box gene 6) and GLOBOSA homologs, but not DEFICIENS, and the C-class AGAMOUS homolog, representing a subset of genes also involved in stamen identity. • Our results may illustrate how petal identity can be partially transferred outside the flower by expressing a subset of stamen identity genes. This adds to the molecular mechanisms explaining the diversity of plant reproductive morphology. © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

  15. Optimizing Biomass Feedstock Logistics for Forest Residue Processing and Transportation on a Tree-Shaped Road Network

    Directory of Open Access Journals (Sweden)

    Hee Han


    Full Text Available An important task in forest residue recovery operations is to select the most cost-efficient feedstock logistics system for a given distribution of residue piles, road access, and available machinery. Notable considerations include inaccessibility of treatment units to large chip vans and frequent, long-distance mobilization of forestry equipment required to process dispersed residues. In this study, we present optimized biomass feedstock logistics on a tree-shaped road network that take into account the following options: (1 grinding residues at the site of treatment and forwarding ground residues either directly to bioenergy facility or to a concentration yard where they are transshipped to large chip vans, (2 forwarding residues to a concentration yard where they are stored and ground directly into chip vans, and (3 forwarding residues to a nearby grinder location and forwarding the ground materials. A mixed-integer programming model coupled with a network algorithm was developed to solve the problem. The model was applied to recovery operations on a study site in Colorado, USA, and the optimal solution reduced the cost of logistics up to 11% compared to the conventional system. This is an important result because this cost reduction propagates downstream through the biomass supply chain, reducing production costs for bioenergy and bioproducts.

  16. Trees are good, but… (United States)

    E.G. McPherson; F. Ferrini


    We know that “trees are good,” and most people believe this to be true. But if this is so, why are so many trees neglected, and so many tree wells empty? An individual’s attitude toward trees may result from their firsthand encounters with specific trees. Understanding how attitudes about trees are shaped, particularly aversion to trees, is critical to the business of...

  17. Flowering Trees

    Indian Academy of Sciences (India)


    shaped corolla. Fruit is large, ellipsoidal, green with a hard and smooth shell containing numerous flattened seeds, which are embedded in fleshy pulp. Calabash tree is commonly grown in the tropical gardens of the world as a botanical oddity.

  18. Flowering Trees

    Indian Academy of Sciences (India)

    medium-sized handsome tree with a straight bole that branches at the top. Leaves are once pinnate, with two to three pairs of leaflets. Young parts of the tree are velvety. Inflorescence is a branched raceme borne at the branch ends. Flowers are large, white, attractive, and fragrant. Corolla is funnel-shaped. Fruit is an ...

  19. Flowering Trees

    Indian Academy of Sciences (India)


    Grevillea robusta A. Cunn. ex R. Br. (Sil- ver Oak) of Proteaceae is a daintily lacy ornamental tree while young and growing into a mighty tree (45 m). Young shoots are silvery grey and the leaves are fern- like. Flowers are golden-yellow in one- sided racemes (10 cm). Fruit is a boat- shaped, woody follicle.

  20. Regeneration in natural and logged tropical rain forest : modelling seed dispersal and regeneration

    NARCIS (Netherlands)

    Ulft, Lambertus Henricus van


    Regeneration and disturbance are thought to play key roles in the maintenance of the high tree species diversity in tropical rain forests. Nevertheless, the earliest stages in the regeneration of tropical rain forest trees, from seed production to established seedlings, have received little

  1. Cryogenic regenerators

    International Nuclear Information System (INIS)

    Kush, P.; Joshi, S.C.; Thirumaleshwar, M.


    Importance of regenerators in cryogenic refrigerators is highlighted. Design aspects of regenerator are reviewed and the factors involved in the selection of regenerator material are enumerated. Various methods used to calculate the heat transfer coefficient and regenerator effectiveness are mentioned. Variation of effectiveness with various parameters is calculated by a computer programme using the ideal, Ackermann and Tipler formulae. Results are presented in graphical form. Listing of the computer programme is given in the Appendix. (author)

  2. Synthetic Phage for Tissue Regeneration

    Directory of Open Access Journals (Sweden)

    So Young Yoo


    Full Text Available Controlling structural organization and signaling motif display is of great importance to design the functional tissue regenerating materials. Synthetic phage, genetically engineered M13 bacteriophage has been recently introduced as novel tissue regeneration materials to display a high density of cell-signaling peptides on their major coat proteins for tissue regeneration purposes. Structural advantages of their long-rod shape and monodispersity can be taken together to construct nanofibrous scaffolds which support cell proliferation and differentiation as well as direct orientation of their growth in two or three dimensions. This review demonstrated how functional synthetic phage is designed and subsequently utilized for tissue regeneration that offers potential cell therapy.

  3. Detection of Single Tree Stems in Forested Areas from High Density ALS Point Clouds Using 3d Shape Descriptors (United States)

    Amiri, N.; Polewski, P.; Yao, W.; Krzystek, P.; Skidmore, A. K.


    Airborne Laser Scanning (ALS) is a widespread method for forest mapping and management purposes. While common ALS techniques provide valuable information about the forest canopy and intermediate layers, the point density near the ground may be poor due to dense overstory conditions. The current study highlights a new method for detecting stems of single trees in 3D point clouds obtained from high density ALS with a density of 300 points/m2. Compared to standard ALS data, due to lower flight height (150-200 m) this elevated point density leads to more laser reflections from tree stems. In this work, we propose a three-tiered method which works on the point, segment and object levels. First, for each point we calculate the likelihood that it belongs to a tree stem, derived from the radiometric and geometric features of its neighboring points. In the next step, we construct short stem segments based on high-probability stem points, and classify the segments by considering the distribution of points around them as well as their spatial orientation, which encodes the prior knowledge that trees are mainly vertically aligned due to gravity. Finally, we apply hierarchical clustering on the positively classified segments to obtain point sets corresponding to single stems, and perform ℓ1-based orthogonal distance regression to robustly fit lines through each stem point set. The ℓ1-based method is less sensitive to outliers compared to the least square approaches. From the fitted lines, the planimetric tree positions can then be derived. Experiments were performed on two plots from the Hochficht forest in Oberösterreich region located in Austria.We marked a total of 196 reference stems in the point clouds of both plots by visual interpretation. The evaluation of the automatically detected stems showed a classification precision of 0.86 and 0.85, respectively for Plot 1 and 2, with recall values of 0.7 and 0.67.

  4. Phylogenetic assemblage structure of North American trees is more strongly shaped by glacial-interglacial climate variability in gymnosperms than in angiosperms. (United States)

    Ma, Ziyu; Sandel, Brody; Svenning, Jens-Christian


    How fast does biodiversity respond to climate change? The relationship of past and current climate with phylogenetic assemblage structure helps us to understand this question. Studies of angiosperm tree diversity in North America have already suggested effects of current water-energy balance and tropical niche conservatism. However, the role of glacial-interglacial climate variability remains to be determined, and little is known about any of these relationships for gymnosperms. Moreover, phylogenetic endemism, the concentration of unique lineages in restricted ranges, may also be related to glacial-interglacial climate variability and needs more attention. We used a refined phylogeny of both angiosperms and gymnosperms to map phylogenetic diversity, clustering and endemism of North American trees in 100-km grid cells, and climate change velocity since Last Glacial Maximum together with postglacial accessibility to recolonization to quantify glacial-interglacial climate variability. We found: (1) Current climate is the dominant factor explaining the overall patterns, with more clustered angiosperm assemblages toward lower temperature, consistent with tropical niche conservatism. (2) Long-term climate stability is associated with higher angiosperm endemism, while higher postglacial accessibility is linked to to more phylogenetic clustering and endemism in gymnosperms. (3) Factors linked to glacial-interglacial climate change have stronger effects on gymnosperms than on angiosperms. These results suggest that paleoclimate legacies supplement current climate in shaping phylogenetic patterns in North American trees, and especially so for gymnosperms.

  5. Biomass yielding potential of naturally regenerated Prosopis juliflora tree stands at three varied ecosystems in southern districts of Tamil Nadu, India. (United States)

    Saraswathi, K; Chandrasekaran, S


    Fuel energy demand is of great concern in recent times due to the depletion of fossil fuel resources. Biomass serves as widely available primary renewable energy source. Hence, a study was performed to assess the above-ground biomass yielding capability of fuel wood tree Prosopis juliflora in three varied ecosystems viz., coastal, fallow land and riparian ecosystems in southern districts of Tamil Nadu. The results showed that the biomass production potential and above-ground net primary productivity of P. juliflora depend on the age of the tree stands and the nature of ecosystem. A higher biomass yield was observed for P. juliflora trees with 5 to 10 years old when compared to less than 5 years of their age. Among the three ecosystems, the maximum biomass production was recorded in riparian ecosystem. The stands with less than 5-year-old P. juliflora trees gave 1.40 t/ha, and 5- to 10-year-old tree stands produced 27.69 t/ha in riparian ecosystem. Above-ground net primary productivity of both the age groups was high in fallow land ecosystem. In riparian ecosystem, the wood showed high density and low sulphur content than the other two ecosystems. Hence, P. juliflora biomass can serve as an environmentally and economically feasible fuel as well as their utilization proffers an effective means to control its invasiveness.


    Directory of Open Access Journals (Sweden)

    S. I. Ripa


    estimate of the age of treefall; measurement of the size of elements of treefall; analysis of the renewal of trees and shrubs, herbs and mossy species on treefall microsites. All investigated beech and dark coniferous-beech forests belong to suballiance Symphyto cordati-Fagenion Vida 1963, alliance Asperulo-Fagion Tx. 1955, order Fagetalia sylvaticae Pawł. in Pawł., Sokol. Et Wall. 1928 class Querco-Fagetea Br.-Bl. et Vlieger 1937. The study of the spatial structure of uneven-aged monodominant and dark coniferous-beech forests made it possible to characterize the mosaic associated with the appearance and development of treefall microsites within the treefall gaps. These elements of the mosaic of the uneven-aged forests represent regeneration niches for many species of trees, shrubs and grasses that determine the ability to maintain a high level of species diversity. The location of tree species and herb cover in the treefall gaps of monodominant beech and dark coniferous-beech forests is associated with the dynamics of treefall microsite complexes. The species diversity of vascular plants and bryophytes increases in the treefall gaps and, ultimately, it is supported by the ongoing process of forming the treefalls. The distribution of tree undergrowth, herbs and mosses on treefall microsites where different environmental conditions are created depends on the ecological properties of these species and the age of the treefall.

  7. Oak regeneration potential increased by shelterwood treatments (United States)

    Richard C. Schlesinger; Ivan L. Sander; Kenneth R. Davidson


    In much of the Central Hardwood Forest Region, oak species are not regenerating well, even though large oak trees are common within the existing forests. The shelterwood method has been suggested as a potential tool for establishing and developing advanced regeneration where it is lacking. The 10-yr results from a study of several variants of the shelterwood method...

  8. Vegetative regeneration (United States)

    George A. Schier; John R. Jones; Robert P. Winokur


    Aspen is noted for its ability to regenerate vegetatively by adventitious shoots or suckers that arise on its long lateral roots. It also produces sprouts from stumps and root collars; but they are not common. In a survey of regeneration after clearcutting mature aspen in Utah. Baker (1918b) found that 92% of the shoots originated from roots, 7% from root collars, and...

  9. Liver regeneration

    NARCIS (Netherlands)

    Chamuleau, R. A.; Bosman, D. K.


    Despite great advances in analysing hemodynamic, morphological and biochemical changes during the process of liver regeneration, the exact (patho)physiological mechanism is still unknown. A short survey of literature is given of the kinetics of liver regeneration and the significance of different

  10. Shape indexes for semi-automated detection of windbreaks in thematic tree cover maps from the central United States (United States)

    Greg C. Liknes; Dacia M. Meneguzzo; Todd A. Kellerman


    Windbreaks are an important ecological resource across the large expanse of agricultural land in the central United States and are often planted in straight-line or L-shaped configurations to serve specific functions. As high-resolution (i.e., <5 m) land cover datasets become more available for these areas, semi-or fully-automated methods for distinguishing...

  11. Stand response of 16-year-old upland hardwood regeneration to crop-tree release on a medium quality site in the Southern Appalachians after 24 years (United States)

    W. Henry. McNab


    A crop tree release was made in a 16-year-old upland hardwood stand on a medium-quality site using one of two treatments: mechanical or chemical. After 24 years there was no significant difference in stand response between the two treatments as measured by mean increase in stand diameter, basal area, total height, height to base of live...

  12. Regeneration of Salicaceae riparian forests in the Northern Hemisphere: A new framework and management tool. (United States)

    González, Eduardo; Martínez-Fernández, Vanesa; Shafroth, Patrick B; Sher, Anna A; Henry, Annie L; Garófano-Gómez, Virginia; Corenblit, Dov


    Human activities on floodplains have severely disrupted the regeneration of foundation riparian shrub and tree species of the Salicaceae family (Populus and Salix spp.) throughout the Northern Hemisphere. Restoration ecologists initially tackled this problem from a terrestrial perspective that emphasized planting. More recently, floodplain restoration activities have embraced an aquatic perspective, inspired by the expanding practice of managing river flows to improve river health (environmental flows). However, riparian Salicaceae species occupy floodplain and riparian areas, which lie at the interface of both terrestrial and aquatic ecosystems along watercourses. Thus, their regeneration depends on a complex interaction of hydrologic and geomorphic processes that have shaped key life-cycle requirements for seedling establishment. Ultimately, restoration needs to integrate these concepts to succeed. However, while regeneration of Salicaceae is now reasonably well-understood, the literature reporting restoration actions on Salicaceae regeneration is sparse, and a specific theoretical framework is still missing. Here, we have reviewed 105 peer-reviewed published experiences in restoration of Salicaceae forests, including 91 projects in 10 world regions, to construct a decision tree to inform restoration planning through explicit links between the well-studied biophysical requirements of Salicaceae regeneration and 17 specific restoration actions, the most popular being planting (in 55% of the projects), land contouring (30%), removal of competing vegetation (30%), site selection (26%), and irrigation (24%). We also identified research gaps related to Salicaceae forest restoration and discuss alternative, innovative and feasible approaches that incorporate the human component. Copyright © 2018 Elsevier Ltd. All rights reserved.

  13. Complete regeneration of ablated eyestalk in penaeid prawn, Penaeus monodon

    Digital Repository Service at National Institute of Oceanography (India)

    Desai, U.M.; Achuthankutty, C

    regenerated in less than 6 months and assumed the shape, size, structure and pigmentation of the unablated eye. Significance of this observation in the context of captive broodstock development and the need for detailed examination of the regeneration process...

  14. Tuber indicum shapes the microbial communities of ectomycorhizosphere soil and ectomycorrhizae of an indigenous tree (Pinus armandii) (United States)

    Li, Qiang; Zhao, Jian; Xiong, Chuan; Li, Xiaolin; Chen, Zuqin; Li, Ping; Huang, Wenli


    The aim of this study was to investigate the effect of an ectomycorrhizal fungus (Tuber indicum) on the diversity of microbial communities associated with an indigenous tree, Pinus armandii, and the microbial communities in the surrounding ectomycorhizosphere soil. High-throughput sequencing was used to analyze the richness of microbial communities in the roots or rhizosphere of treatments with or without ectomycorrhizae. The results indicated that the bacterial diversity of ectomycorhizosphere soil was significantly lower compared with the control soil. Presumably, the dominance of truffle mycelia in ectomycorhizosphere soil (80.91%) and ectomycorrhizae (97.64%) was the main factor that resulted in lower diversity and abundance of endophytic pathogenic fungi, including Fusarium, Monographella, Ustilago and Rhizopus and other competitive mycorrhizal fungi, such as Amanita, Lactarius and Boletus. Bacterial genera Reyranena, Rhizomicrobium, Nordella, Pseudomonas and fungal genera, Cuphophyllus, Leucangium, Histoplasma were significantly more abundant in ectomycorrhizosphere soil and ectomycorrhizae. Hierarchical cluster analysis of the similarities between rhizosphere and ectomycorrhizosphere soil based on the soil properties differed significantly, indicating the mycorrhizal synthesis may have a feedback effect on soil properties. Meanwhile, some soil properties were significantly correlated with bacterial and fungal diversity in the rhizosphere or root tips. Overall, this work illustrates the interactive network that exists among ectomycorrhizal fungi, soil properties and microbial communities associated with the host plant and furthers our understanding of the ecology and cultivation of T. indicum. PMID:28410376

  15. Tuber indicum shapes the microbial communities of ectomycorhizosphere soil and ectomycorrhizae of an indigenous tree (Pinus armandii.

    Directory of Open Access Journals (Sweden)

    Qiang Li

    Full Text Available The aim of this study was to investigate the effect of an ectomycorrhizal fungus (Tuber indicum on the diversity of microbial communities associated with an indigenous tree, Pinus armandii, and the microbial communities in the surrounding ectomycorhizosphere soil. High-throughput sequencing was used to analyze the richness of microbial communities in the roots or rhizosphere of treatments with or without ectomycorrhizae. The results indicated that the bacterial diversity of ectomycorhizosphere soil was significantly lower compared with the control soil. Presumably, the dominance of truffle mycelia in ectomycorhizosphere soil (80.91% and ectomycorrhizae (97.64% was the main factor that resulted in lower diversity and abundance of endophytic pathogenic fungi, including Fusarium, Monographella, Ustilago and Rhizopus and other competitive mycorrhizal fungi, such as Amanita, Lactarius and Boletus. Bacterial genera Reyranena, Rhizomicrobium, Nordella, Pseudomonas and fungal genera, Cuphophyllus, Leucangium, Histoplasma were significantly more abundant in ectomycorrhizosphere soil and ectomycorrhizae. Hierarchical cluster analysis of the similarities between rhizosphere and ectomycorrhizosphere soil based on the soil properties differed significantly, indicating the mycorrhizal synthesis may have a feedback effect on soil properties. Meanwhile, some soil properties were significantly correlated with bacterial and fungal diversity in the rhizosphere or root tips. Overall, this work illustrates the interactive network that exists among ectomycorrhizal fungi, soil properties and microbial communities associated with the host plant and furthers our understanding of the ecology and cultivation of T. indicum.

  16. Flowering Trees

    Indian Academy of Sciences (India)

    deciduous tree with irregularly-shaped trunk, greyish-white scaly bark and milky latex. Leaves in opposite pairs are simple, oblong and whitish beneath. Flowers that occur in branched inflorescence are white, 2–. 3cm across and fragrant. Calyx is glandular inside. Petals bear numerous linear white scales, the corollary.

  17. Flowering Trees

    Indian Academy of Sciences (India)


    Hook.f. ex Brandis (Yellow. Cadamba) of Rubiaceae is a large and handsome deciduous tree. Leaves are simple, large, orbicular, and drawn abruptly at the apex. Flowers are small, yellowish and aggregate into small spherical heads. The corolla is funnel-shaped with five stamens inserted at its mouth. Fruit is a capsule.

  18. Flowering Trees

    Indian Academy of Sciences (India)


    Flowers are borne on stiff bunches terminally on short shoots. They are 2-3 cm across, white, sweet-scented with light-brown hairy sepals and many stamens. Loquat fruits are round or pear-shaped, 3-5 cm long and are edible. A native of China, Loquat tree is grown in parks as an ornamental and also for its fruits.

  19. Species Turnover across Different Life Stages from Seedlings to Canopy Trees in Swamp Forests of Central Brazil

    Directory of Open Access Journals (Sweden)

    Clarissa G. Fontes


    Full Text Available Processes driving the assembly of swamp forest communities have been poorly explored. We analyzed natural regeneration and adult tree communities data of a swamp gallery forest in Central Brazil to discuss the role of ecological filters in shaping plant species turnover in a successional gradient. Species data of 120 plots were used to assess species turnover between natural regeneration and adult tree communities. Our analyses were based on 4995 individuals belonging to 72 species. Community patterns were discerned using ordination analyses. A clear floristic turnover among plant life stages was distinguished. Regeneration community of swamp forests was richer in species composition than the adult community. Tree species commonly found in nonflooded gallery forests were present in the regeneration plots but not in the adult community. Differences in the floristic composition of these two strata suggest that not all species in the seedling stage can stand permanent flooding conditions and only a few tolerant species survive to become adult trees. We propose that natural disturbances play an important role by altering limiting resources, allowing seeds of nonflooded forest species to germinate. This paper elucidates the turnover between plant life stages in swamp forests and suggests mechanisms that may shape these communities.

  20. Landscape variation in tree regeneration and snag fall drive fuel loads in 24-year old post-fire lodgepole pine forests. (United States)

    Nelson, Kellen N; Turner, Monica G; Romme, William H; Tinker, Daniel B


    Escalating wildfire in subalpine forests with stand-replacing fire regimes is increasing the extent of early-seral forests throughout the western USA. Post-fire succession generates the fuel for future fires, but little is known about fuel loads and their variability in young post-fire stands. We sampled fuel profiles in 24-year-old post-fire lodgepole pine (Pinus contorta var. latifolia) stands (n = 82) that regenerated from the 1988 Yellowstone Fires to answer three questions. (1) How do canopy and surface fuel loads vary within and among young lodgepole pine stands? (2) How do canopy and surface fuels vary with pre- and post-fire lodgepole pine stand structure and environmental conditions? (3) How have surface fuels changed between eight and 24 years post-fire? Fuel complexes varied tremendously across the landscape despite having regenerated from the same fires. Available canopy fuel loads and canopy bulk density averaged 8.5 Mg/ha (range 0.0-46.6) and 0.24 kg/m 3 (range: 0.0-2.3), respectively, meeting or exceeding levels in mature lodgepole pine forests. Total surface-fuel loads averaged 123 Mg/ha (range: 43-207), and 88% was in the 1,000-h fuel class. Litter, 1-h, and 10-h surface fuel loads were lower than reported for mature lodgepole pine forests, and 1,000-h fuel loads were similar or greater. Among-plot variation was greater in canopy fuels than surface fuels, and within-plot variation was greater than among-plot variation for nearly all fuels. Post-fire lodgepole pine density was the strongest positive predictor of canopy and fine surface fuel loads. Pre-fire successional stage was the best predictor of 100-h and 1,000-h fuel loads in the post-fire stands and strongly influenced the size and proportion of sound logs (greater when late successional stands had burned) and rotten logs (greater when early successional stands had burned). Our data suggest that 76% of the young post-fire lodgepole pine forests have 1,000-h fuel loads that exceed levels

  1. My Regeneration:

    DEFF Research Database (Denmark)

    Carter, Dale


    and cultural referents shows that it offers an index to the album. Using its frontier setting and a variety of sacred and secular myths, symbols and icons, ‘Heroes and Villains,’ like Smile as a whole, offers historically-informed visions of national decline, crisis and regeneration that are at once critical...

  2. A practical alternative to single tree selection? (United States)

    Gary W. Miller; H. Clay Smith


    When landowners want to develop and maintain an uneven-aged tree structure in eastern hardwood stands, single-tree selection often is suggested as the only advisable, long-term partial regeneration harvest method. Single-tree selection is preferred because it provides a means for improving quality and controlling stocking of the residual stand necessary for sustained...

  3. Periodontal regeneration. (United States)

    Ivanovski, S


    The ultimate goal of periodontal therapy is the regeneration of the tissues destroyed as a result of periodontal disease. Currently, two clinical techniques, based on the principles of "guided tissue regeneration" (GTR) or utilization of the biologically active agent "enamel matrix derivative" (EMD), can be used for the regeneration of intrabony and Class II mandibular furcation periodontal defects. In cases where additional support and space-making requirements are necessary, both of these procedures can be combined with a bone replacement graft. There is no evidence that the combined use of GTR and EMD results in superior clinical results compared to the use of each material in isolation. Great variability in clinical outcomes has been reported in relation to the use of both EMD and GTR, and these procedures can be generally considered to be unpredictable. Careful case selection and treatment planning, including consideration of patient, tooth, site and surgical factors, is required in order to optimize the outcomes of treatment. There are limited data available for the clinical effectiveness of other biologically active molecules, such as growth factors and platelet concentrates, and although promising results have been reported, further clinical trials are required in order to confirm their effectiveness. Current active areas of research are centred on tissue engineering and gene therapy strategies which may result in more predictable regenerative outcomes in the future.

  4. Limitantes físicos y bióticos de la regeneración arbórea en matorrales sucesionales de la Isla Grande de Chiloé, Chile Physical and biotic constraints on tree regeneration in secondary shrublands of Chiloé Island, Chile

    Directory of Open Access Journals (Sweden)



    Full Text Available Los matorrales sucesionales establecidos después de la corta y quema de bosques son frecuentes en Chiloé y territorios continentales vecinos. Estos sitios son dominados por arbustos de Baccharis patagonica, musgos en cojín del género Sphagnum, plantas palustres y helechos. En estos sitios hemos registrado escasa o nula colonización arbórea (Successional shrublands created by clearcutting and burning of forests are frequent in Chiloé Island and surrounding mainland in southern Chile. These areas are characterized by seasonally waterlogged soils, and vegetation dominated by sedges, ferns and shrubs, such as Baccharis patagonica, with thick carpets of Sphagnum moss occupying the spaces between shrubs. Tree regeneration in these sites was shown to be sparse or completely lacking (< 0.3 seedlings m-2 compared with 7.2 seedlings m-2 in adjacent forests. Colonization of shade-intolerant, pioneer trees may be reduced underneath Baccharis due to crown shading and on top of Sphagnum cushions, because of unfavorable conditions for tree establishment, including low pH and soil water saturation. We evaluated differences in germination rates among pioneer tree species grown in an experimental soil moisture gradient. Seed germination percentage was low for Drimys winteri and Nothofagus nitida unrelated to humidity conditions but differed between substrates (moss vs. soil. Embothrium had higher germination and survivorship when growing on Sphagnum cushions. We also monitored seedling survival of two pioneer tree species (Embothrium coccineum and Drimys winteri transplanted directly under Baccharis shrubs, in open areas, or on moss patches. Even though survivorship of Embothrium and Drimys under Baccharis was < 40 %, in one of the study sites, there were no differences between treatments. Waterlogged soils would constraint tree regeneration on successional shrublands due to a lack of elevated substrates. However, the presence of Sphagnum cushions favors

  5. Unpalatable plants facilitate tree sapling survival in wooded pastures

    NARCIS (Netherlands)

    Smit, C.; Ouden, den J.; Müller-Schärer, H.


    Summary 1. In endangered wooded pasture ecosystems established tree saplings are frequently found in spatial association with protective structures, suggesting nurse effects. This associational resistance is thought to be a driving force behind tree regeneration in wooded pastures. Experimental

  6. Evolutionary melting pots: a biodiversity hotspot shaped by ring diversifications around the Black Sea in the Eastern tree frog (Hyla orientalis). (United States)

    Dufresnes, Christophe; Litvinchuk, Spartak N; Leuenberger, Julien; Ghali, Karim; Zinenko, Oleksandr; Stöck, Matthias; Perrin, Nicolas


    Hotspots of intraspecific genetic diversity, which are of primary importance for the conservation of species, have been associated with glacial refugia, that is areas where species survived the Quaternary climatic oscillations. However, the proximate mechanisms generating these hotspots remain an open issue. Hotspots may reflect the long-term persistence of large refugial populations; alternatively, they may result from allopatric differentiation between small and isolated populations, that later admixed. Here, we test these two scenarios in a widely distributed species of tree frog, Hyla orientalis, which inhabits Asia Minor and southeastern Europe. We apply a fine-scale phylogeographic survey, combining fast-evolving mitochondrial and nuclear markers, with a dense sampling throughout the range, as well as ecological niche modelling, to understand what shaped the genetic variation of this species. We documented an important diversity centre around the Black Sea, composed of multiple allopatric and/or parapatric diversifications, likely driven by a combination of Pleistocene climatic fluctuations and complex regional topography. Remarkably, this diversification forms a ring around the Black Sea, from the Caucasus through Anatolia and eastern Europe, with terminal forms coming into contact and partially admixing in Crimea. Our results support the view that glacial refugia generate rather than host genetic diversity and can also function as evolutionary melting pots of biodiversity. Moreover, we report a new case of ring diversification, triggered by a large, yet cohesive dispersal barrier, a very rare situation in nature. Finally, we emphasize the Black Sea region as an important centre of intraspecific diversity in the Palearctic with implications for conservation. © 2016 John Wiley & Sons Ltd.

  7. Effects of fire and browsing on regeneration of blue oak (United States)

    James W. Bartolome; Mitchel P. McClaran; Barbara H. Allen-Diaz; Jim Dunne; Lawrence D. Ford; Richard B. Standiford; Neil K. McDougald; Larry C. Forero


    Blue oaks (Quercus douglasii) are not regenerating well over much of California. The roles of fire and browsing in regeneration are probably significant, but poorly understood. We burned two foothill blue oak woodland sites which contained significant numbers of small trees between 40 and 70 cm tall, then compared height growth over 14 years among 48...

  8. Regeneration of Algerian germplasm by stigma/style somatic ...

    African Journals Online (AJOL)

    ... days in most of the cultured genotypes. Formed embryos were cultured in a single tube before in vivo acclimatization. After sanitary assays, regenerated plants were shown to be free from the agents detected in the mother trees. Key words: Algeria, citrus germplasm, plant regeneration, sanitation, somatic embryogenesis.

  9. Understanding recruitment failure in tropical tree species: Insights from a tree ring study

    NARCIS (Netherlands)

    Vlam, M.; Baker, P.J.; Bunyavejchewin, S.; Mohren, G.M.J.; Zuidema, P.A.


    Many tropical tree species have population structures that exhibit strong recruitment failure. While the presence of adult trees indicates that appropriate regeneration conditions occurred in the past, it is often unclear why small individuals are absent. Knowing how, when and where these tree

  10. Regeneração de espécies arbóreas e relações com componente adulto em uma floresta estacional no vale do rio Uruguai, Brasil Tree regeneration and relationships with adult trees in a seasonal forest in the Uruguai river valley, Brazil

    Directory of Open Access Journals (Sweden)

    Gabriela Leyser


    Full Text Available O estudo de fenômenos relacionados às variações na estrutura das comunidades vegetais tem cada vez mais envolvido a avaliação do potencial de regeneração das espécies arbóreas, uma vez que a regeneração torna as florestas capazes de se restaurarem após distúrbios naturais ou antrópicos. Neste sentido, objetivou-se avaliar o componente arbóreo regenerante, identificando composição e abundância, grupos funcionais de dispersão, estratificação vertical e necessidades de luz para germinação, além de estimativas de riqueza e diversidade e comparar estes valores com o respectivo componente adulto. O levantamento foi realizado em 20 unidades amostrais de 10 x 10 m, sendo amostrados todos os indivíduos com altura > 0,30 m e diâmetro a altura do solo 4,7 cm. Foram amostrados 1.649 indivíduos em regeneração, pertencentes a 64 espécies, com densidade total estimada em 8.245 ind.ha-1. As espécies com maior densidade absoluta foram Gymnanthes concolor Spreng., Trichilia elegans A.Juss. e Calyptranthes tricona D.Legrand. Uma análise de coordenadas principais indicou nítida separação das unidades amostrais amostradas e um teste de Mantel revelou haver independência entre as matrizes de composição e abundância dos componentes adulto e regenerante (r = 0,19; p = 0,1. Dentre os grupos funcionais, verificou-se que o componente regenerante está mantendo as mesmas proporções observadas para o componente adulto, com maior proporção de espécies zoocóricas, dependentes de luz para germinação e formadoras do dossel florestal. Ao contrário do esperado, houve diminuição da riqueza no componente regenerante (p Studies related to variation in plant communities have been involved the analysis of regenerative potential of tree species, because saplings may enable forests to restore themselves after natural or human disturbances. The goal of this study was to analyze tree regeneration by identifying composition and abundance

  11. Cardiomyocyte Regeneration

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    Toshio Nakanishi


    Full Text Available The heart was initially believed to be a terminally differentiated organ; once the cardiomyocytes died, no recovery could be made to replace the dead cells. However, around a decade ago, the concept of cardiac stem cells (CSCs in adult hearts was proposed. CSCs differentiate into cardiomyocytes, keeping the heart functioning. Studies have proved the existence of stem cells in the heart. These somatic stem cells have been studied for use in cardiac regeneration. Moreover, recently, induced pluripotent stem cells (iPSCs were invented, and methodologies have now been developed to induce stable cardiomyocyte differentiation and purification of mature cardiomyocytes. A reprogramming method has also been applied to direct reprogramming using cardiac fibroblasts into cardiomyocytes. Here, we address cardiomyocyte differentiation of CSCs and iPSCs. Furthermore, we describe the potential of CSCs in regenerative biology and regenerative medicine.

  12. Heart regeneration. (United States)

    Breckwoldt, Kaja; Weinberger, Florian; Eschenhagen, Thomas


    Regenerating an injured heart holds great promise for millions of patients suffering from heart diseases. Since the human heart has very limited regenerative capacity, this is a challenging task. Numerous strategies aiming to improve heart function have been developed. In this review we focus on approaches intending to replace damaged heart muscle by new cardiomyocytes. Different strategies for the production of cardiomyocytes from human embryonic stem cells or human induced pluripotent stem cells, by direct reprogramming and induction of cardiomyocyte proliferation are discussed regarding their therapeutic potential and respective advantages and disadvantages. Furthermore, different methods for the transplantation of pluripotent stem cell-derived cardiomyocytes are described and their clinical perspectives are discussed. This article is part of a Special Issue entitled: Cardiomyocyte Biology: Integration of Developmental and Environmental Cues in the Heart edited by Marcus Schaub and Hughes Abriel. Copyright © 2015 Elsevier B.V. All rights reserved.

  13. Plant regeneration through indirect organogenesis of chestnut ...

    African Journals Online (AJOL)



    Dec 18, 2013 ... Druce-A multiple desert tree. Researcher 1:28-32. Kvaalen H, Gram Daehlen O, Tove Rognstad A, Grǿnstad B,. Egertsdotter U (2005). Somatic embryogenesis for plant production of. Abies lasiocarpa. Can. J. For. Res. 35:1053-1060. Liu CZ, Murch SJ, Demerdash MEL, Saxena PK (2003). Regeneration.

  14. Coppice Woods and Pollard Trees in the Visual Arts

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    Lacina Jan


    Full Text Available The sprouting capacity of some broadleaves has been used for their regeneration since ancient times. Often concurrently with taking advantage of sprouting stools, the trees used to be shaped also by pruning their stems, namely on pasturelands and in grazing forests. The activity of woodcutters and shepherds was obviously rather common in warmer climates with broadleaved stands because coppice and pollard trees appear relatively often in the visual arts from ancient works through the period if the Italian and German Renaissance up to the romantic and realistic landscape painting of the 19th century overlapping into the 20th century. For centuries, most frequently illustrated in European and Czech paintings have been pollard willows (Salix spp.. Other coppice and pollard tree species identified in paintings are oaks (Quercus spp., hornbeam (Carpinus betulus, European beech (Fagus sylvatica, European chestnut (Castanea sativa, and rarely other species, too. Artists apparently often used bizarrely shaped woods to increase the dramatic atmosphere of their landscape sceneries as well as figural compositions, and the coppice and pollard trees had certainly also a symbolic meaning in some of their works.

  15. Weak Evidence of Regeneration Habitat but Strong Evidence of Regeneration Niche for a Leguminous Shrub (United States)

    Delerue, Florian; Gonzalez, Maya; Michalet, Richard; Pellerin, Sylvain; Augusto, Laurent


    The identification of an ecological niche specific to the regeneration phase has mobilised significant attention. However, the importance of the regeneration niche concept remains unclear. Our main objective was to study the existence of such a regeneration niche for a leguminous shrub, Ulex europaeus. This study was carried out in southwest France in the context of water and nutrient stresses (mainly phosphorus limitation) due to the presence of nutrient-poor sandy soils. We analysed the regeneration of the species from the germination of seeds and emergence of new seedlings until the seedlings reached young shrub size. Our design included a P fertilisation treatment. We also investigated microsite characteristics (micro-topography and vegetation development) as they can interact with meteorological conditions and determine water availability for seeds and seedlings. We found that P availability controlled seedling growth and the time necessary to reach young shrub size. Water availability appeared to impact the species germination and seedlings survival. We also found that P and water availability depended on the interactions between microsite characteristics and climatic variations. Finally we found evidence that P and water availability are important ecological factors shaping the regeneration niche of the species, but we found weak evidence that any microsite would be appropriate for the regeneration of the species in the long term. Future studies regarding regeneration niches need to distinguish more clearly the ecological factors important for regeneration (the regeneration niche per se) and the physical world where the seedlings appear and develop (the regeneration habitat). PMID:26098877

  16. Weak Evidence of Regeneration Habitat but Strong Evidence of Regeneration Niche for a Leguminous Shrub.

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    Florian Delerue

    Full Text Available The identification of an ecological niche specific to the regeneration phase has mobilised significant attention. However, the importance of the regeneration niche concept remains unclear. Our main objective was to study the existence of such a regeneration niche for a leguminous shrub, Ulex europaeus. This study was carried out in southwest France in the context of water and nutrient stresses (mainly phosphorus limitation due to the presence of nutrient-poor sandy soils. We analysed the regeneration of the species from the germination of seeds and emergence of new seedlings until the seedlings reached young shrub size. Our design included a P fertilisation treatment. We also investigated microsite characteristics (micro-topography and vegetation development as they can interact with meteorological conditions and determine water availability for seeds and seedlings. We found that P availability controlled seedling growth and the time necessary to reach young shrub size. Water availability appeared to impact the species germination and seedlings survival. We also found that P and water availability depended on the interactions between microsite characteristics and climatic variations. Finally we found evidence that P and water availability are important ecological factors shaping the regeneration niche of the species, but we found weak evidence that any microsite would be appropriate for the regeneration of the species in the long term. Future studies regarding regeneration niches need to distinguish more clearly the ecological factors important for regeneration (the regeneration niche per se and the physical world where the seedlings appear and develop (the regeneration habitat.

  17. Mixed-severity fire fosters heterogeneous spatial patterns of conifer regeneration in a dry conifer forest (United States)

    Sparkle L. Malone; Paula J. Fornwalt; Mike A. Battaglia; Marin E. Chambers; Jose M. Iniguez; Carolyn H. Sieg


    We examined spatial patterns of post-fire regenerating conifers in a Colorado, USA, dry conifer forest 11-12 years following the reintroduction of mixed-severity fire. We mapped and measured all post-fire regenerating conifers, as well as all other post-fire regenerating trees and all residual (i.e., surviving) trees, in three 4-ha plots following the 2002 Hayman Fire...

  18. Hyperinnervation improves Xenopus laevis limb regeneration. (United States)

    Mitogawa, Kazumasa; Makanae, Aki; Satoh, Akira


    Xenopus laevis (an anuran amphibian) shows limb regeneration ability between that of urodele amphibians and that of amniotes. Xenopus frogs can initiate limb regeneration but fail to form patterned limbs. Regenerated limbs mainly consist of cone-shaped cartilage without any joints or branches. These pattern defects are thought to be caused by loss of proper expressions of patterning-related genes. This study shows that hyperinnervation surgery resulted in the induction of a branching regenerate. The hyperinnervated blastema allows the identification and functional analysis of the molecules controlling this patterning of limb regeneration. This paper focuses on the nerve affects to improve Xenopus limb patterning ability during regeneration. The nerve molecules, which regulate limb patterning, were also investigated. Blastemas grown in a hyperinnervated forelimb upregulate limb patterning-related genes (shh, lmx1b, and hoxa13). Nerves projecting their axons to limbs express some growth factors (bmp7, fgf2, fgf8, and shh). Inputs of these factors to a blastema upregulated some limb patterning-related genes and resulted in changes in the cartilage patterns in the regenerates. These results indicate that additional nerve factors enhance Xenopus limb patterning-related gene expressions and limb regeneration ability, and that bmp, fgf, and shh are candidate nerve substitute factors. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

  19. Regeneração de espécies arbóreas sob a influência de Merostachys multiramea Hack. (Poaceae em uma floresta subtropical Regeneration of tree species influenced by Merostachys multiramea Hack. (Poaceae in a subtropical forest

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    Suzana Cyrino dos Santos


    Full Text Available A ocorrência de bambúseas é comum em muitas fisionomias florestais, sendo que a elevada abundância destas espécies pode interagir com a regeneração de espécies arbóreas. Foi avaliada a regeneração de espécies arbóreas e de Merostachys multiramea Hack. em uma área de transição entre Floresta Ombrófila Mista e Floresta Estacional no Sul do Brasil e comparada a estrutura de regeneração da área entre dois e quatro anos após floração, frutificação e morte de M. multiramea. Foram alocadas 25 unidades amostrais de 100 m² dispostas de forma aleatória, onde foram amostrados todos os colmos vivos de M. multiramea e indivíduos regenerantes de espécies arbóreas > 30 cm de altura e com perímetro à altura do peito The occurrence of bamboo species is common in several forest physiognomies, and the high abundance of these species may affect the regeneration of other ones. We evaluated both tree species and Merostachys multiramea Hack. recruitment in a transition area between mixed Araucaria rain forest and seasonal semideciduous forests in southern Brazil. We compared the regeneration structure of the areas evaluated two and four years after flowering, fruiting and death of M. multiramea. We randomly distributed 25 100 m² sampling units, and surveyed all living culms of M. multiramea and tree saplings. We sampled 4,372 living bamboos and 2,918 tree saplings, belonging to 32 plant families and 75 species. Most species were classified as zoochorous and canopy light-demanding. On the other hand, plant abundance revealed a greater contribution of autochorous, understory and shade-tolerant trees. M. multiramea density was higher over the four years after the reproductive event (p<0.05, with taller culms (p<0.01, but with the same mean number of culms (p=0.46. A NPMANOVA revealed significant differences in composition and abundance between surveys, with higher similarity among samplings two years after the reproductive event of M

  20. Regeneration of Salicaceae riparian forests in the Northern Hemisphere: A new framework and management tool (United States)

    Gonzalez, Eduardo; Martinez-Fernandez, Vanesa; Shafroth, Patrick B.; Sher, Anna A.; Henry, Annie L.; Garofano-Gomez, Virginia; Corenblit, Dov


    Human activities on floodplains have severely disrupted the regeneration of foundation riparian shrub and tree species of the Salicaceae family (Populus and Salix spp.) throughout the Northern Hemisphere. Restoration ecologists initially tackled this problem from a terrestrial perspective that emphasized planting. More recently, floodplain restoration activities have embraced an aquatic perspective, inspired by the expanding practice of managing river flows to improve river health (environmental flows). However, riparian Salicaceae species occupy floodplain and riparian areas, which lie at the interface of both terrestrial and aquatic ecosystems along watercourses. Thus, their regeneration depends on a complex interaction of hydrologic and geomorphic processes that have shaped key life-cycle requirements for seedling establishment. Ultimately, restoration needs to integrate these concepts to succeed. However, while regeneration of Salicaceae is now reasonably well-understood, the literature reporting restoration actions on Salicaceae regeneration is sparse, and a specific theoretical framework is still missing. Here, we have reviewed 105 peer-reviewed published experiences in restoration of Salicaceae forests, including 91 projects in 10 world regions, to construct a decision tree to inform restoration planning through explicit links between the well-studied biophysical requirements of Salicaceaeregeneration and 17 specific restoration actions, the most popular being planting (in 55% of the projects), land contouring (30%), removal of competing vegetation (30%), site selection (26%), and irrigation (24%). We also identified research gaps related to Salicaceae forest restoration and discuss alternative, innovative and feasible approaches that incorporate the human component.

  1. Sampling forest regeneration across northern U.S. forests: filling a void in regeneration model input (United States)

    William H. McWilliams; Charles D. Canham; Randall S. Morin; Katherine Johnson; Paul Roth; James A. Westfall


    The Forest Inventory and Analysis Program of the Northern Research Station (NRS-FIA) has implemented new Advance Tree Seedling Regeneration (ATSR) protocols that include measurements of seedlings down to 2 inches in height. The addition of ATSR protocols is part of an evaluation of NRS-FIA Phase 3 indicator variables to increase sampling intensity from 1/96,000 acres...

  2. Common environmental factors explain both ectomycorrhizal species diversity and pine regeneration variability in a post-fire Mediterranean forest. (United States)

    Buscardo, Erika; Freitas, Helena; Pereira, João Santos; De Angelis, Paolo


    Natural seedling regeneration and establishment after stand replacing wildfires is influenced by a series of environmental and biological constraints. In this study, we characterized the diversity and structure of the ectomycorrhizal (ECM) fungal community associated with post-fire naturally regenerated maritime pine saplings, and individuate the environmental factors responsible for fungal species distribution. We also identify the main environmental factors responsible for maritime pine regeneration variability and assessed the relation between saplings performance and ECM fungal diversity indices. Fungal species were identified by direct sequencing of internal transcribed spacer regions. Five years after the disturbance event, a total of 30 taxa colonized the pine saplings. The ECM fungal community was dominated by ruderal species of the genus Rhizopogon (present in almost half of the samples). Almost one third of the identified ECM fungal species belonged to the family Thelephoraceae. Typical k-selected species like Amanita pantherina, Boletus aestivalis, Lactarius chrysorrheus, and Russula densifolia were found on pine saplings collected in proximity of unburnt pine trees, in correspondence with low erosion extents. Pine regeneration varied throughout the study areas and was enhanced at higher elevations, in correspondence with moderate slopes, shallower soils, and a reduced cover of ericaceous shrubs and bare ground. These conditions were found in close proximity to patches of pine trees that survived the disturbance event and were previously characterized by a higher pre-fire pine biomass. Even though no correlations were found between saplings performance and ECM fungal diversity indices, common environmental factors (i.e., ericaceous shrub cover, extent of erosion, slope, and soil depth) were responsible for shaping the ECM fungal distribution and for describing most of the explained regeneration variability.

  3. The gravity apple tree

    International Nuclear Information System (INIS)

    Aldama, Mariana Espinosa


    The gravity apple tree is a genealogical tree of the gravitation theories developed during the past century. The graphic representation is full of information such as guides in heuristic principles, names of main proponents, dates and references for original articles (See under Supplementary Data for the graphic representation). This visual presentation and its particular classification allows a quick synthetic view for a plurality of theories, many of them well validated in the Solar System domain. Its diachronic structure organizes information in a shape of a tree following similarities through a formal concept analysis. It can be used for educational purposes or as a tool for philosophical discussion. (paper)

  4. Large-scale patterns of Quercus ilex, Quercus suber, and Quercus pyrenaica regeneration in central-western Spain

    DEFF Research Database (Denmark)

    Plieninger, Tobias; Rolo, Víctor; Moreno, Gerardo


    In Central-Western Spain, forests and woodlands composed of Quercus sp. support outstanding levels of biodiversity, but there is increasing concern about their long-term persistence due to a lack of regeneration. We hypothesize that this regenerative lack is operating on a large geographic scale....... Regeneration was positively correlated with tree cover and density, especially of small and medium-sized trees, and negatively correlated with the presence of large trees, indicating that regeneration failure is mostly associated with more open, uniform, and/or aged woodlands. Regeneration densities of Q. ilex...

  5. Dissimilarity between two skeletal trees in a context

    DEFF Research Database (Denmark)

    Baseski, Emre; Erdem, Aykut; Tari, Sibel


    Skeletal trees are commonly used in order to express geometric properties of the shape. Accordingly, tree-edit distance is used to compute a dissimilarity between two given shapes. We present a new tree-edit based shape matching method which uses a recent coarse skeleton representation. The coars...

  6. Epigenetic Variance, Performing Cooperative Structure with Genetics, Is Associated with Leaf Shape Traits in Widely Distributed Populations of Ornamental Tree Prunus mume

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    Kaifeng Ma


    Full Text Available Increasing evidence shows that epigenetics plays an important role in phenotypic variance. However, little is known about epigenetic variation in the important ornamental tree Prunus mume. We used amplified fragment length polymorphism (AFLP and methylation-sensitive amplified polymorphism (MSAP techniques, and association analysis and sequencing to investigate epigenetic variation and its relationships with genetic variance, environment factors, and traits. By performing leaf sampling, the relative total methylation level (29.80% was detected in 96 accessions of P. mume. And the relative hemi-methylation level (15.77% was higher than the relative full methylation level (14.03%. The epigenetic diversity (I∗ = 0.575, h∗ = 0.393 was higher than the genetic diversity (I = 0.484, h = 0.319. The cultivated population displayed greater epigenetic diversity than the wild populations in both southwest and southeast China. We found that epigenetic variance and genetic variance, and environmental factors performed cooperative structures, respectively. In particular, leaf length, width and area were positively correlated with relative full methylation level and total methylation level, indicating that the DNA methylation level played a role in trait variation. In total, 203 AFLP and 423 MSAP associated markers were detected and 68 of them were sequenced. Homologous analysis and functional prediction suggested that the candidate marker-linked genes were essential for leaf morphology development and metabolism, implying that these markers play critical roles in the establishment of leaf length, width, area, and ratio of length to width.

  7. Epigenetic Variance, Performing Cooperative Structure with Genetics, Is Associated with Leaf Shape Traits in Widely Distributed Populations of Ornamental Tree Prunus mume. (United States)

    Ma, Kaifeng; Sun, Lidan; Cheng, Tangren; Pan, Huitang; Wang, Jia; Zhang, Qixiang


    Increasing evidence shows that epigenetics plays an important role in phenotypic variance. However, little is known about epigenetic variation in the important ornamental tree Prunus mume . We used amplified fragment length polymorphism (AFLP) and methylation-sensitive amplified polymorphism (MSAP) techniques, and association analysis and sequencing to investigate epigenetic variation and its relationships with genetic variance, environment factors, and traits. By performing leaf sampling, the relative total methylation level (29.80%) was detected in 96 accessions of P . mume . And the relative hemi-methylation level (15.77%) was higher than the relative full methylation level (14.03%). The epigenetic diversity ( I ∗ = 0.575, h ∗ = 0.393) was higher than the genetic diversity ( I = 0.484, h = 0.319). The cultivated population displayed greater epigenetic diversity than the wild populations in both southwest and southeast China. We found that epigenetic variance and genetic variance, and environmental factors performed cooperative structures, respectively. In particular, leaf length, width and area were positively correlated with relative full methylation level and total methylation level, indicating that the DNA methylation level played a role in trait variation. In total, 203 AFLP and 423 MSAP associated markers were detected and 68 of them were sequenced. Homologous analysis and functional prediction suggested that the candidate marker-linked genes were essential for leaf morphology development and metabolism, implying that these markers play critical roles in the establishment of leaf length, width, area, and ratio of length to width.

  8. Fungi occurring in forests injured by air pollutants in the Upper Silesia and Cracov industrial Regions. V. Fungi inhabiting the overground portions of trees used in the regeneration of stands converted in 1971-1975

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    S. Domański


    Full Text Available Results of investigations on fungi infecting both the leaves, needles or shoots, and the branches or trunks of 6-15-year-old tree species in forest stands rebuilt within two industrial regions in Poland are given in this paper.

  9. Thinning in artificially regenerated young beech stands

    Directory of Open Access Journals (Sweden)

    Novák Jiří


    Full Text Available Although beech stands are usually regenerated naturally, an area of up to 5,000 ha year−1 is artificially regenerated by beech in the Czech Republic annually. Unfortunately, these stands often showed insufficient stand density and, consequently, lower quality of stems. Therefore, thinning methods developed for naturally regenerated beech stands are applicable with difficulties. The paper evaluates the data from two thinning experiments established in young artificially regenerated beech stands located in different growing conditions. In both experiments, thinning resulted in the lower amount of salvage cut in following years. Positive effect of thinning on periodic stand basal area increment and on periodic diameter increment of dominant trees was found in the beech stand located at middle elevations. On the other hand, thinning effects in mountain conditions were negligible. Thinning focusing on future stand quality cannot be commonly applied in artificially regenerated beech stands because of their worse initial quality and lower density. However, these stands show good growth and response to thinning, hence their management can be focused on maximising beech wood production.

  10. Desulfurization sorbent regeneration (United States)

    Jalan, V.M.; Frost, D.G.


    A spent solid sorbent resulting from the removal of hydrogen sulfide from a fuel gas flow is regenerated with a steam-air mixture. The mixture of steam and air may also include additional nitrogen or carbon dioxide. The gas mixture contacts the spent sorbent containing metal sulfide at a temperature above 500/sup 0/C to regenerate the sulfide to metal oxide or carbonate. Various metal species including the period four transition metals and the lanthanides are suitable sorbents that may be regenerated by this method. In addition, the introduction of carbon dioxide gas permits carbonates such as those of strontium, barium and calcium to be regenerated. The steam permits regeneration of spent sorbent without formation of metal sulfate. Moreover, the regeneration will proceed with low oxygen concentrations and will occur without the increase in temperature to minimize the risk of sintering and densification of the sorbent. This method may be used for high-temperature fuel cells.

  11. Mixed-Severity Fire Fosters Heterogeneous Spatial Patterns of Conifer Regeneration in a Dry Conifer Forest

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    Sparkle L. Malone


    Full Text Available We examined spatial patterns of post-fire regenerating conifers in a Colorado, USA, dry conifer forest 11–12 years following the reintroduction of mixed-severity fire. We mapped and measured all post-fire regenerating conifers, as well as all other post-fire regenerating trees and all residual (i.e., surviving trees, in three 4-ha plots following the 2002 Hayman Fire. Residual tree density ranged from 167 to 197 trees ha−1 (TPH, and these trees were clustered at distances up to 30 m. Post-fire regenerating conifers, which ranged in density from 241 to 1036 TPH, were also clustered at distances up to at least 30 m. Moreover, residual tree locations drove post-fire regenerating conifer locations, with the two showing a pattern of repulsion. Topography and post-fire sprouting tree species locations further drove post-fire conifer regeneration locations. These results provide a foundation for anticipating how the reintroduction of mixed-severity fire may affect long-term forest structure, and also yield insights into how historical mixed-severity fire may have regulated the spatially heterogeneous conditions commonly described for pre-settlement dry conifer forests of Colorado and elsewhere.

  12. Zirconia changes after grinding and regeneration firing. (United States)

    Hatanaka, Gabriel R; Polli, Gabriela S; Fais, Laiza M G; Reis, José Maurício Dos S N; Pinelli, Lígia A P


    Despite improvements in computer-aided design and computer-aided manufacturing (CAD-CAM) systems, grinding during either laboratory procedures or clinical adjustments is often needed to modify the shape of 3 mol(%) yttria-tetragonal zirconia polycrystal (3Y-TZP) restorations. However, the best way to achieve adjustment is unclear. The purpose of this in vitro study was to evaluate the microstructural and crystallographic phase changes, flexural strength, and Weibull modulus of a 3Y-TZP zirconia after grinding with or without water cooling and regeneration firing. Ninety-six bar-shaped specimens were obtained and divided as follows: as-sintered, control; as-sintered with regeneration firing; grinding without water cooling; grinding and regeneration firing with water cooling; and grinding and regeneration firing. Grinding (0.3 mm) was performed with a 150-μm diamond rotary instrument in a high-speed handpiece. For regeneration firing, the specimens were annealed at 1000°C for 30 minutes. The crystalline phases were evaluated by using x-ray powder diffraction. A 4-point bending test was conducted (10 kN; 0.5 mm/min). The Weibull modulus was used to analyze strength reliability. The microstructure was analyzed by scanning electron microscopy. Data from the flexural strength test were evaluated using the Kruskal-Wallis and Dunn tests (α=.05). Tetragonal-to-monoclinic phase transformation was identified in the ground specimens; R regeneration firing groups showed only the tetragonal phase. The median flexural strength of as-sintered specimens was 642.0; 699.3 MPa for as-sintered specimens with regeneration firing; 770.1 MPa for grinding and water-cooled specimens; 727.3 MPa for specimens produced using water-cooled grinding and regeneration firing; 859.9 MPa for those produced by grinding; and 764.6 for those produced by grinding and regeneration firing; with statistically higher values for the ground groups. The regenerative firing did not affect the flexural

  13. Colonization history, host distribution, anthropogenic influence and landscape features shape populations of white pine blister rust, an invasive alien tree pathogen.

    Directory of Open Access Journals (Sweden)

    Simren Brar

    Full Text Available White pine blister rust is caused by the fungal pathogen Cronartium ribicola J.C. Fisch (Basidiomycota, Pucciniales. This invasive alien pathogen was introduced into North America at the beginning of the 20th century on pine seedlings imported from Europe and has caused serious economic and ecological impacts. In this study, we applied a population and landscape genetics approach to understand the patterns of introduction and colonization as well as population structure and migration of C. ribicola. We characterized 1,292 samples of C. ribicola from 66 geographic locations in North America using single nucleotide polymorphisms (SNPs and evaluated the effect of landscape features, host distribution, and colonization history on the structure of these pathogen populations. We identified eastern and western genetic populations in North America that are strongly differentiated. Genetic diversity is two to five times higher in eastern populations than in western ones, which can be explained by the repeated accidental introductions of the pathogen into northeastern North America compared with a single documented introduction into western North America. These distinct genetic populations are maintained by a barrier to gene flow that corresponds to a region where host connectivity is interrupted. Furthermore, additional cryptic spatial differentiation was identified in western populations. This differentiation corresponds to landscape features, such as mountain ranges, and also to host connectivity. We also detected genetic differentiation between the pathogen populations in natural stands and plantations, an indication that anthropogenic movement of this pathogen still takes place. These results highlight the importance of monitoring this invasive alien tree pathogen to prevent admixture of eastern and western populations where different pathogen races occur.

  14. Regeneración de un bosque mixto de Nothofagus (Nothofagaceae después de una corta selectiva Regeneration of a Nothofagus (Nothofagaceae mixed forest after selective cutting

    Directory of Open Access Journals (Sweden)



    Full Text Available El estudio de la ecología de la regeneración natural del bosque constituye una parte esencial de la silvicultura. El cerro Tren Tren (40°12' S, 71°26' O, 1.367 m, Reserva Mapuche Curruhuinca, Argentina está ocupado por un bosque cerrado compuesto por Nothofagus dombeyi, N. nervosa y N. obliqua. En 1994 se estimó la densidad de renovales (diámetro en la base del tallo Understanding forest regeneration is essential to develop sound, ecologically-based silvicultural practices. Mount Tren Tren (40°12' S, 71°26' W, 1,367 m, Reservation Mapuche Curruhuinca, Argentina is occupied by a closed stand of Nothofagus dombeyi, N. obliqua, and N. nervosa. In 1994, tree regeneration (root collar diameter < 10 cm was estimated to be 90 ind ha-1. After that, a group selection silvicultural system was implemented and the resulting 10 artificial gaps of between 1,587 and 4,322 m² were enclosed to prevent grazing by domestic livestock. Size and age structure of regeneration were analysed based on systematic and random samplings. All tree species became established simultaneously within the artificial gaps. However, the less light demanding N. nervosa exhibited a mean age slightly larger given its differential persistence as "advanced regeneration" previous to cutting treatment. Tree regeneration was estimated in 97,006 ind ha-1 (68 % of N. dombeyi, 20 % of N. obliqua, and 12 % of N. nervosa. Regeneration abundance and composition were unrelated to shape and size of regeneration gaps, nor to abundance of adult trees within the stand and along the gap boundaries. A significant positive effect of the enclosure on plant was observed. The 86 % of juvenile Nothofagus were present when understory height and cover were low to intermediate. The management plan is considered adequate if the abundance of regeneration is compared before and after its implementation, and encourages the use and conservation of this forest type under the current silvicultural system

  15. Nitrogen fixation in seedlings of Mimosa tenuiflora cultivated with different times of regeneration of caatinga

    International Nuclear Information System (INIS)

    Silva, Arthur Jorge da; Andrade, Monaliza Mirella de Morais; Santana, Augusto Cesar de Arruda; Freitas, Ana Dolores Santiago de


    The aim of this study was to estimate the efficiency of the populations of bacteria that form nodules on legumes (BNL) in areas at different times of regeneration of native 'caatinga' using a leguminous tree of the study area

  16. Economic analysis of replacement regeneration and coppice regeneration in eucalyptus stands under risk conditions

    Directory of Open Access Journals (Sweden)

    Isabel Carolina de Lima Guedes


    Full Text Available Projects are by their very nature subject to conditions of uncertainty that obstruct the decision-making process. Uncertainties involving forestry projects are even greater, as they are combined with time of return on capital invested, being medium to long term. For successful forest planning, it is necessary to quantify uncertainties by converting them into risks. The decision on whether to adopt replacement regeneration or coppice regeneration in a forest stand is influenced by several factors, which include land availability for new forest crops, changes in project end use, oscillations in demand and technological advancement. This study analyzed the economic feasibility of replacement regeneration and coppice regeneration of eucalyptus stands, under deterministic and under risk conditions. Information was gathered about costs and revenues for charcoal production in order to structure the cash flow used in the economic analysis, adopting the Net Present Value method (VPL. Risk assessment was based on simulations running the Monte Carlo method. Results led to the following conclusions: replacement regeneration is economically viable, even if the future stand has the same productivity as the original stand; coppice regeneration is an economically viable option even if productivity is a mere 70% of the original stand (high-tree planted stand, the best risk-return ratio option is restocking the stand (replacement regeneration by one that is 20% more productive; the probabilistic analysis running the Monte Carlo method revealed that invariably there is economic viability for the various replacement and coppice regeneration options being studied, minimizing uncertainties and consequently increasing confidence in decision-making.

  17. Modeling natural regeneration biomass of Pinus stand

    Directory of Open Access Journals (Sweden)

    Rafael Cubas


    Full Text Available Reliable biomass data are very important in the evaluation of ecosystems, and help in understanding the contribution of forests in climate change. Variables that describe the size of the tree, like diameter and height are directly associated with biomass, which allows the use of regression models to estimate this element. Therefore, this study aimed to estimate by regression models, the biomass of different compartments of natural regeneration of trees of a Pinus taeda L. stand. The data were obtained through direct destructive method, using 100 randomly selected trees in the understory of a stand of Pinus taeda. We analyzed three arithmetical models, three logarithmic and two models developed by Stepwise process. Logarithmic equations developed by Stepwise procedure showed the best estimates of total and stems biomass. However, for needles and twigs compartments the best adjust was observed with Husch model and for root biomass Berkhout model proved to be the most suitable.

  18. A Mixed-Effects Heterogeneous Negative Binomial Model for Postfire Conifer Regeneration in Northeastern California, USA (United States)

    Justin S. Crotteau; Martin W. Ritchie; J. Morgan. Varner


    Many western USA fire regimes are typified by mixed-severity fire, which compounds the variability inherent to natural regeneration densities in associated forests. Tree regeneration data are often discrete and nonnegative; accordingly, we fit a series of Poisson and negative binomial variation models to conifer seedling counts across four distinct burn severities and...

  19. Predicting mortality of ponderosa pine regeneration after prescribed fire in the Black Hills, South Dakota, USA (United States)

    Mike Battaglia; Frederick W. Smith; Wayne D. Shepperd


    Reduction of crown fire hazard in Pinus ponderosa forests in the Black Hills, SD, often focuses on the removal of overstorey trees to reduce crown bulk density. Dense ponderosa pine regeneration establishes several years after treatment and eventually increases crown fire risk if allowed to grow. Using prescribed fire to control this regeneration is...

  20. Comparison of snag densities among regeneration treatments in mixed pine-hardwood forests (United States)

    Roger W. Perry; Ronald E. Thill


    Standing dead trees (snags) are an important component of forest ecosystems, providing foraging, nesting, and roosting substrate for a variety of vertebrates. We examined the effects of four forest regeneration treatments on residual snag density and compared those with densities found in unharvested, naturally regenerated forests (controls) during the second, fourth,...

  1. Forest Service's Northern Research Station FIA launches 24-state study of forest regeneration (United States)

    Will McWilliams; Shawn Lehman; Paul Roth; Jim. Westfall


    Inventory foresters often quake when asked to count tree seedlings, because the work is tedious and sometimes means tallying hundreds of stems. They also know that the density and quality of advance regeneration are key to the success of new stand establishment. Seedling counts provide valuable information on regeneration adequacy, forest diversity, wildlife habitat,...

  2. On marginal regeneration

    NARCIS (Netherlands)

    Stein, H.N.


    On applying the marginal regeneration concept to the drainage of free liquid films, problems are encountered: the films do not show a "neck" of minimum thickness at the film/border transition; and the causes of the direction dependence of the marginal regeneration are unclear. Both problems can be

  3. Flowering Trees

    Indian Academy of Sciences (India)

    Flowering Trees. Boswellia serrata Roxb. ex Colebr. (Indian Frankincense tree) of Burseraceae is a large-sized deciduous tree that is native to India. Bark is thin, greenish-ash-coloured that exfoliates into smooth papery flakes. Stem exudes pinkish resin ... Fruit is a three-valved capsule. A green gum-resin exudes from the ...

  4. Flowering Trees

    Indian Academy of Sciences (India)

    IAS Admin

    Flowering Trees. Ailanthus excelsa Roxb. (INDIAN TREE OF. HEAVEN) of Simaroubaceae is a lofty tree with large pinnately compound alternate leaves, which are ... inflorescences, unisexual and greenish-yellow. Fruits are winged, wings many-nerved. Wood is used in making match sticks. 1. Male flower; 2. Female flower.

  5. Flowering Trees

    Indian Academy of Sciences (India)

    Flowering Trees. Gyrocarpus americanus Jacq. (Helicopter Tree) of Hernandiaceae is a moderate size deciduous tree that grows to about 12 m in height with a smooth, shining, greenish-white bark. The leaves are ovate, rarely irregularly ... flowers which are unpleasant smelling. Fruit is a woody nut with two long thin wings.

  6. Flowering Trees

    Indian Academy of Sciences (India)

    More Details Fulltext PDF. Volume 8 Issue 8 August 2003 pp 112-112 Flowering Trees. Zizyphus jujuba Lam. of Rhamnaceae · More Details Fulltext PDF. Volume 8 Issue 9 September 2003 pp 97-97 Flowering Trees. Moringa oleifera · More Details Fulltext PDF. Volume 8 Issue 10 October 2003 pp 100-100 Flowering Trees.

  7. Demagnetizing fields in active magnetic regenerators

    DEFF Research Database (Denmark)

    Nielsen, Kaspar Kirstein; Bahl, Christian R.H.; Smith, Anders


    A magnetic material in an externally applied magnetic field will in general experience a spatially varying internal magnetic field due to demagnetizing effects. When the performance of active magnetic regenerators (AMRs) is evaluated using numerical models the internal field is often assumed...... is in general both a function of the overall shape of the regenerator and its morphology (packed particles, parallel plates etc.) as well as the magnetization of the material. Due to the pronounced temperature dependence of the magnetization near the Curie temperature, the demagnetization field is also...... temperature dependent. We propose a relatively straightforward method to correct sufficiently for the demagnetizing field in AMR models. We discuss how the demagnetizing field behaves in regenerators made of packed spheres under realistic operation conditions....

  8. Tree compression with top trees

    DEFF Research Database (Denmark)

    Bille, Philip; Gørtz, Inge Li; Landau, Gad M.


    We introduce a new compression scheme for labeled trees based on top trees [3]. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

  9. Tree compression with top trees

    DEFF Research Database (Denmark)

    Bille, Philip; Gørtz, Inge Li; Landau, Gad M.


    We introduce a new compression scheme for labeled trees based on top trees. Our compression scheme is the first to simultaneously take advantage of internal repeats in the tree (as opposed to the classical DAG compression that only exploits rooted subtree repeats) while also supporting fast...

  10. Full Length Research Paper Plant regeneration of Michelia ...

    African Journals Online (AJOL)

    Michelia champaca L. is a woody ornamental tree species which has high commercial value to be used as a basic material for perfume, cosmetic, and medicine. The development of an efficient plant regeneration system for M. champaca is essential for the production of Champaca planting material and precondition for ...

  11. Structure and Regeneration Status of Gedo Dry Evergreen Montane ...

    African Journals Online (AJOL)

    This study was conducted on Gedo Dry Evergreen Montane Forest in West Shewa Zone of Oromia National Regional State, 182-196 km west of Addis Ababa (Finfinne). The objective of the study was to determine structure and regeneration status of Gedo Forest. All trees and shrubs with Diameter at Breast Height (DBH) ...

  12. An assessment of the forest regeneration potential of the taungya ...

    African Journals Online (AJOL)

    The study identified lack of credit facilities, inadequate funding and ignorance of the advantage of tree crops on tropical farmland as well as inadequate technical support as the major constraints of the taungya system. The taungya system is effective for forest regeneration albeit taking care of farmers' interest beyond the ...

  13. Above- and below-ground competition in high and low irradiance: tree seedling responses to a competing liana Byttneria grandifolia

    NARCIS (Netherlands)

    Chen, J.Y.; Bongers, F.; Cao, K.F.; Cai, Z.Q.


    Abstract: In tropical forests, trees compete not only with other trees, but also with lianas, which may limit tree growth and regeneration. Liana effects may depend on the availability of above- and below-ground resources and differ between tree species. We conducted a shade house experiment to test

  14. Helping the Retina Regenerate (United States)

    ... the retina News Brief 03/30/17 A new report gives recommendations for regenerating retinal ganglion cells (RGCs), crucial neurons in the back of the eye that carry visual information to the brain. Authored ...

  15. Transpiration and stomatal conductance in a young secondary tropical montane forest: contrasts between native trees and invasive understorey shrubs. (United States)

    Ghimire, Chandra Prasad; Bruijnzeel, L Adrian; Lubczynski, Maciek W; Zwartendijk, Bob W; Odongo, Vincent Omondi; Ravelona, Maafaka; van Meerveld, H J Ilja


    It has been suggested that vigorous secondary tropical forests can have very high transpiration rates, but sap flow and stomatal conductance dynamics of trees and shrubs in these forests are understudied. In an effort to address this knowledge gap, sap flow (thermal dissipation method, 12 trees) and stomatal conductance (porometry, six trees) were measured for young (5-7 years) Psiadia altissima (DC.) Drake trees, a widely occurring species dominating young regrowth following abandonment of swidden agriculture in upland eastern Madagascar. In addition, stomatal conductance (gs) was determined for three individuals of two locally common invasive shrubs (Lantana camara L. and Rubus moluccanus L.) during three periods with contrasting soil moisture conditions. Values of gs for the three investigated species were significantly higher and more sensitive to climatic conditions during the wet period compared with the dry period. Further, gs of the understorey shrubs was much more sensitive to soil moisture content than that of the trees. Tree transpiration rates (Ec) were relatively stable during the dry season and were only affected somewhat by soil water content at the end of the dry season, suggesting the trees had continued access to soil water despite drying out of the topsoil. The Ec exhibited a plateau-shaped relation with vapour pressure deficit (VPD), which was attributed to stomatal closure at high VPD. Vapour pressure deficit was the major driver of variation in Ec, during both the wet and the dry season. Overall water use of the trees was modest, possibly reflecting low site fertility after three swidden cultivation cycles. The observed contrast in gs response to soil water and climatic conditions for the trees and shrubs underscores the need to take root distributions into account when modelling transpiration from regenerating tropical forests.

  16. Continuing Climate Warming Will Result in Failure of Post-Harvest Natural Regeneration across the Landscape in Interior Alaska (United States)

    Morimoto, M.; Juday, G. P.; Huettmann, F.


    Following forest disturbance, the stand initiation stage decisively influences future forest structure. Understanding post-harvest regeneration, especially under climate change, is essential to predicting future carbon stores in this extensive forest biome. We apply IPCC B1, A1B, and A2 climate scenarios to generate plausible future forest conditions under different management. We recorded presence of white spruce, birch, and aspen in 726 plots on 30 state forest white spruce harvest units. We built spatially explicit models and scenarios of species presence/absence using TreeNet (Stochastic Gradient Boosting). Post-harvest tree regeneration predictions in calibration data closely matched the validation set, indicating tree regeneration scenarios are reliable. Early stage post-harvest regeneration is similar to post-fire regeneration and matches the pattern of long-term natural vegetation distribution, confirming that site environmental factors are more important than management practices. Post-harvest natural regeneration of tree species increases under moderate warming scenarios, but fails under strong warming scenarios in landscape positions with high temperatures and low precipitation. Under all warming scenarios, the most successful regenerating species following white spruce harvest is white spruce. Birch experiences about 30% regeneration failure under A2 scenario by 2050. White spruce and aspen are projected to regenerate more successfully when site preparation is applied. Although white spruce has been the major managed species, birch may require more intensive management. Sites likely to experience regeneration failure of current tree species apparently will experience biome shift, although adaptive migration of existing or new species might be an option. Our scenario modeling tool allows resource managers to forecast tree regeneration on productive managed sites that have made a disproportionate contribution to carbon flux in a critical region.

  17. Tree Nut Allergies (United States)

    ... Blog Vision Awards Common Allergens Tree Nut Allergy Tree Nut Allergy Learn about tree nut allergy, how ... a Tree Nut Label card . Allergic Reactions to Tree Nuts Tree nuts can cause a severe and ...

  18. Spatial patterns of ponderosa pine regeneration in high-severity burn patches (United States)

    Suzanne M. Owen; Carolyn H. Sieg; Andrew J. Sanchez. Meador; Peter Z. Fule; Jose M. Iniguez; L. Scott. Baggett; Paula J. Fornwalt; Michael A. Battaglia


    Contemporary wildfires in southwestern US ponderosa pine forests can leave uncharacteristically large patches of tree mortality, raising concerns about the lack of seed-producing trees, which can prevent or significantly delay ponderosa pine regeneration. We established 4-ha plots in high-severity burn patches in two Arizona wildfires, the 2000 Pumpkin and 2002 Rodeo-...

  19. Beetle-killed stands in the South Carolina piedmont: from fuel hazards to regenerating oak forests (United States)

    Aaron D. Stottlemyer; G. Geoff Wang; Thomas A. Waldrop


    Impacts of spring prescribed fire, mechanical mastication, and no-treatment (control) on fuels and natural hardwood tree regeneration were examined in beetle-killed stands in the South Carolina Piedmont. Mechanical mastication ground the down and standing dead trees and live vegetation into mulch and deposited it onto the forest floor. The masticated debris layer had...

  20. Applying Hotspot Detection Methods in Forestry: A Case Study of Chestnut Oak Regeneration

    International Nuclear Information System (INIS)

    Fei, S.


    Hotspot detection has been widely adopted in health sciences for disease surveillance, but rarely in natural resource disciplines. In this paper, two spatial scan statistics (SaT Scan and Cluster Seer) and a non spatial classification and regression trees method were evaluated as techniques for identifying chestnut oak (Quercus Montana) regeneration hotspots among 50 mixed-oak stands in the central Appalachian region of the eastern United States. Hotspots defined by the three methods had a moderate level of conformity and revealed similar chestnut oak regeneration site affinity. Chestnut oak regeneration hotspots were positively associated with the abundance of chestnut oak trees in the over story and a moderate cover of heather species (Vaccinium and Gaylussacia spp.) but were negatively associated with the abundance of hay scented fern (Dennstaedtia punctilobula) and mountain laurel (Kalmia latiforia). In general, hotspot detection is a viable tool for assisting natural resource managers with identifying areas possessing significantly high or low tree regeneration.

  1. Applying Hotspot Detection Methods in Forestry: A Case Study of Chestnut Oak Regeneration

    Directory of Open Access Journals (Sweden)

    Songlin Fei


    Full Text Available Hotspot detection has been widely adopted in health sciences for disease surveillance, but rarely in natural resource disciplines. In this paper, two spatial scan statistics (SaTScan and ClusterSeer and a nonspatial classification and regression trees method were evaluated as techniques for identifying chestnut oak (Quercus Montana regeneration hotspots among 50 mixed-oak stands in the central Appalachian region of the eastern United States. Hotspots defined by the three methods had a moderate level of conformity and revealed similar chestnut oak regeneration site affinity. Chestnut oak regeneration hotspots were positively associated with the abundance of chestnut oak trees in the overstory and a moderate cover of heather species (Vaccinium and Gaylussacia spp. but were negatively associated with the abundance of hayscented fern (Dennstaedtia punctilobula and mountain laurel (Kalmia latiforia. In general, hotspot detection is a viable tool for assisting natural resource managers with identifying areas possessing significantly high or low tree regeneration.

  2. Fostering and Planning Urban Regeneration

    DEFF Research Database (Denmark)

    Lidegaard, Christina; Nuccio, Massimiliano; Bille, Trine


    Policy-makers and urban planners struggle to find the right formula to implement urban regeneration processes based on cultural assets, often focusing on the desired outcomes, but rarely questioning how the policy process can shape them. This paper examines different governance models...... cultural districts in the city centre. The paper contributes to the literature on cultural districts by matching specificities and contingencies attached to a particular urban area with the governance model adopted for its development. The paper claims that temporal experimentation has to be included...... for the implementation and organization of cultural districts, and evaluates how they can affect their actual realization by investigating three cases in Copenhagen, Denmark. The deindustrialization of Copenhagen left many of the city’s harbour areas disused and in turn provided the opportunity to develop three new...

  3. Flowering Trees

    Indian Academy of Sciences (India)

    Cassia siamia Lamk. (Siamese tree senna) of Caesalpiniaceae is a small or medium size handsome tree. Leaves are alternate, pinnately compound and glandular, upto 18 cm long with 8–12 pairs of leaflets. Inflorescence is axillary or terminal and branched. Flowering lasts for a long period from March to February. Fruit is ...

  4. Flowering Trees

    Indian Academy of Sciences (India)

    Flowering Trees. Cerbera manghasL. (SEA MANGO) of Apocynaceae is a medium-sized evergreen coastal tree with milky latex. The bark is grey-brown, thick and ... Fruit is large. (5–10 cm long), oval containing two flattened seeds and resembles a mango, hence the name Mangas or. Manghas. Leaves and fruits contain ...

  5. Flowering Trees

    Indian Academy of Sciences (India)


    Flowering Trees. Gliricidia sepium(Jacq.) Kunta ex Walp. (Quickstick) of Fabaceae is a small deciduous tree with. Pinnately compound leaves. Flower are prroduced in large number in early summer on terminal racemes. They are attractive, pinkish-white and typically like bean flowers. Fruit is a few-seeded flat pod.

  6. Flowering Trees

    Indian Academy of Sciences (India)

    Flowering Trees. Acrocarpus fraxinifolius Wight & Arn. (PINK CEDAR, AUSTRALIAN ASH) of. Caesalpiniaceae is a lofty unarmed deciduous native tree that attains a height of 30–60m with buttresses. Bark is thin and light grey. Leaves are compound and bright red when young. Flowers in dense, erect, axillary racemes.

  7. Talking Trees (United States)

    Tolman, Marvin


    Students love outdoor activities and will love them even more when they build confidence in their tree identification and measurement skills. Through these activities, students will learn to identify the major characteristics of trees and discover how the pace--a nonstandard measuring unit--can be used to estimate not only distances but also the…

  8. Drawing Trees

    DEFF Research Database (Denmark)

    Halkjær From, Andreas; Schlichtkrull, Anders; Villadsen, Jørgen


    We formally prove in Isabelle/HOL two properties of an algorithm for laying out trees visually. The first property states that removing layout annotations recovers the original tree. The second property states that nodes are placed at least a unit of distance apart. We have yet to formalize three...

  9. Trends over time in tree and seedling phylogenetic diversity indicate regional differences in forest biodiversity change (United States)

    Kevin M. Potter; Christopher W. Woodall


    Changing climate conditions may impact the short-term ability of forest tree species to regenerate in many locations. In the longer term, tree species may be unable to persist in some locations while they become established in new places. Over both time frames, forest tree biodiversity may change in unexpected ways. Using repeated inventory measurements five years...

  10. Equations for estimating biomass, foliage area, and sapwood of small trees in the southern Appalachians (United States)

    Steven T. Brantley; Morgan L. Schulte; Paul V. Bolstad; Chelcy F. Miniat


    Small trees and shrubs play an important role in forest diversity and regeneration and may contribute substantially to ecosystem fluxes of carbon and water; however, relatively little attention is given to quantifying the contribution of small trees to forest processes. One reason for this may be that the allometric equations developed for large trees tend to...

  11. Perfluorodecalin and bone regeneration

    Directory of Open Access Journals (Sweden)

    F Tamimi


    Full Text Available Perfluorodecalin (PFD is a chemically and biologically inert biomaterial and, as many perfluorocarbons, is also hydrophobic, radiopaque and has a high solute capacity for gases such as oxygen. In this article we have demonstrated, both in vitro and in vivo, that PFD may significantly enhance bone regeneration. Firstly, the potential benefit of PFD was demonstrated by prolonging the survival of bone marrow cells cultured in anaerobic conditions. These findings translated in vivo, where PFD incorporated into bone-marrow-loaded 3D-printed scaffolds substantially improved their capacity to regenerate bone. Secondly, in addition to biological applications, we have also shown that PFD improves the radiopacity of bone regeneration biomaterials, a key feature required for the visualisation of biomaterials during and after surgical implantation. Finally, we have shown how the extreme hydrophobicity of PFD enables the fabrication of highly cohesive self-setting injectable biomaterials for bone regeneration. In conclusion, perfluorocarbons would appear to be highly beneficial additives to a number of regenerative biomaterials, especially those for bone regeneration.

  12. Phylogenetic trees


    Baños, Hector; Bushek, Nathaniel; Davidson, Ruth; Gross, Elizabeth; Harris, Pamela E.; Krone, Robert; Long, Colby; Stewart, Allen; Walker, Robert


    We introduce the package PhylogeneticTrees for Macaulay2 which allows users to compute phylogenetic invariants for group-based tree models. We provide some background information on phylogenetic algebraic geometry and show how the package PhylogeneticTrees can be used to calculate a generating set for a phylogenetic ideal as well as a lower bound for its dimension. Finally, we show how methods within the package can be used to compute a generating set for the join of any two ideals.

  13. PROGRAM HTVOL: The Determination of Tree Crown Volume by Layers (United States)

    Joseph C. Mawson; Jack Ward Thomas; Richard M. DeGraaf


    A FORTRAN IV computer program calculates, from a few field measurements, the volume of tree crowns. This volume is in layers of a specified thickness of trees or large shrubs. Each tree is assigned one of 15 solid forms, formed by using one of five side shapes (a circle, an ellipse, a neiloid, a triangle, or a parabolalike shape), and one of three bottom shapes (a...

  14. Electron Tree

    DEFF Research Database (Denmark)

    Appelt, Ane L; Rønde, Heidi S


    The photo shows a close-up of a Lichtenberg figure – popularly called an “electron tree” – produced in a cylinder of polymethyl methacrylate (PMMA). Electron trees are created by irradiating a suitable insulating material, in this case PMMA, with an intense high energy electron beam. Upon discharge......, during dielectric breakdown in the material, the electrons generate branching chains of fractures on leaving the PMMA, producing the tree pattern seen. To be able to create electron trees with a clinical linear accelerator, one needs to access the primary electron beam used for photon treatments. We...... appropriated a linac that was being decommissioned in our department and dismantled the head to circumvent the target and ion chambers. This is one of 24 electron trees produced before we had to stop the fun and allow the rest of the accelerator to be disassembled....

  15. Supercritical fluid regeneration of adsorbents (United States)

    Defilippi, R. P.; Robey, R. J.


    The results of a program to perform studies supercritical (fluid) carbon dioxide (SCF CO2) regeneration of adsorbents, using samples of industrial wastewaters from manufacturing pesticides and synthetic solution, and to estimate the economics of the specific wastewater treatment regenerations, based on test data are given. Processing costs for regenerating granular activated carbon GAC) for treating industrial wastewaters depend on stream properties and regeneration throughput.

  16. Study Of Plant Regeneration Potential In Tropical Moist Deciduous Forest In Northern India

    Directory of Open Access Journals (Sweden)

    Ashish K Mishra


    Full Text Available Regeneration patterns of species population can address climate change by adaptive evolution or by migrating association to survive in their favorable climate and finally decided to particular forest future. In this paper we examined the status of regeneration potential of tree species in tropical moist deciduous forest at Katerniaghat Wildlife Sanctuary, Northern India. To investigate tree, sapling and seedling population distribution, we examine regeneration status in 145 random plots in study area. Total 74 plant species of 60 genera belonging to 32 families out of which 71 species of trees, 56 of seedlings and 60 of saplings were found in the forest. On the basis of importance value index Mallotus philippensis, Tectona grandis, Shorea robusta, Syzygium cumini and Bombax ceiba have been found as dominant species in the study area. As far as the regeneration status is concerned, the maximum tree species (64% have been found in good regeneration category. Significant variations in species richness and population density, between three life form (i. e. tree, sapling and seedling have been found. In which only three new tree species Prosopis juliflora, Psidium guajava and Morus alba were added in sapling and seedling stage. It is major ecological concern that about 19 % economically important plant species like Madhuca longifolia, Terminalia elliptica, Buchanania cochinchinensis, some Ficus species etc. have been found in poor regeneration phage, whereas about 7% species found in no regeneration categories. International Journal of Environment, Volume-2, Issue-1, Sep-Nov 2013, Pages 153-163 DOI:

  17. An active magnetic regenerator device

    DEFF Research Database (Denmark)


    A rotating active magnetic regenerator (AMR) device comprising two or more regenerator beds, a magnet arrangement and a valve arrangement. The valve arrangement comprises a plurality of valve elements arranged substantially immovably with respect to the regenerator beds along a rotational direction...

  18. Infection and Pulp Regeneration

    Directory of Open Access Journals (Sweden)

    Sahng G. Kim


    Full Text Available The regeneration of the pulp-dentin complex has been a great challenge to both scientists and clinicians. Previous work has shown that the presence of prior infection may influence the characteristics of tissues formed in the root canal space after regenerative endodontic treatment. The formation of ectopic tissues such as periodontal ligament, bone, and cementum has been observed in the root canal space of immature necrotic teeth with apical periodontitis, while the regeneration of dentin and pulp has been identified in previously non-infected teeth. The current regenerative endodontic therapy utilizes disinfection protocols, which heavily rely on chemical irrigation using conventional disinfectants. From a microbiological point of view, the current protocols may not allow a sufficiently clean root canal microenvironment, which is critical for dentin and pulp regeneration. In this article, the significance of root canal disinfection in regenerating the pulp-dentin complex, the limitations of the current regenerative endodontic disinfection protocols, and advanced disinfection techniques designed to reduce the microorganisms and biofilms in chronic infection are discussed.

  19. Stimulating endogenous cardiac regeneration

    Directory of Open Access Journals (Sweden)

    Amanda eFinan


    Full Text Available The healthy adult heart has a low turnover of cardiac myocytes. The renewal capacity, however, is augmented after cardiac injury. Participants in cardiac regeneration include cardiac myocytes themselves, cardiac progenitor cells, and peripheral stem cells, particularly from the bone marrow compartment. Cardiac progenitor cells and bone marrow stem cells are augmented after cardiac injury, migrate to the myocardium, and support regeneration. Depletion studies of these populations have demonstrated their necessary role in cardiac repair. However, the potential of these cells to completely regenerate the heart is limited. Efforts are now being focused on ways to augment these natural pathways to improve cardiac healing, primarily after ischemic injury but in other cardiac pathologies as well. Cell and gene therapy or pharmacological interventions are proposed mechanisms. Cell therapy has demonstrated modest results and has passed into clinical trials. However, the beneficial effects of cell therapy have primarily been their ability to produce paracrine effects on the cardiac tissue and recruit endogenous stem cell populations as opposed to direct cardiac regeneration. Gene therapy efforts have focused on prolonging or reactivating natural signaling pathways. Positive results have been demonstrated to activate the endogenous stem cell populations and are currently being tested in clinical trials. A potential new avenue may be to refine pharmacological treatments that are currently in place in the clinic. Evidence is mounting that drugs such as statins or beta blockers may alter endogenous stem cell activity. Understanding the effects of these drugs on stem cell repair while keeping in mind their primary function may strike a balance in myocardial healing. To maximize endogenous cardiac regeneration,a combination of these approaches couldameliorate the overall repair process to incorporate the participation ofmultiple cell players.


    Directory of Open Access Journals (Sweden)

    Voinikov V.K.


    Full Text Available Wood is one of the most widespread materials on the Earth. Wood raw materials may be used either to generate energy directly or to produce biofuel. The demand for sufficient amount of wood for these purposes necessitated establishment of arboreal plantations. Poplar тополь (Populus sp. is the most promising object to produce wood from plantations. In the last few years the Institute has been involved in the studies of potential of somaclonal variability in tissue cultivars to select plants with high growth indices. Berlin polar (P. × berolinensis, has been selected for this purpose, as its pyramid-shaped crown allows to place more plants on a plantation square area unit. It easily propagates by grafts and coppice shoots and is fairly resistant to leaf rust. Fast-growing trees may be acquired due to somaclonal variability and genetic transformation. In both cases an indispensable preliminary condition is a well-tested protocol of acquiring regenerates and their propagation in the cultivar of isolated tissues. Such a protocol has been worked out by now. It comprises the following phases: 1 isolation of stem tops in the first half of summer ant their sterilization; 2 cutting of explantates and their cultivation on the medium to induce regeneration; 3 propagation of regenerates on propagation medium; 4 elongation of regenerants; 5 rooting of regenerants; 6 acclimation and transfer of plants to the field for growth. At phases 3, 4 and 5 plants with desirable somaclonal changes are selected. Somaclonal varieties are selected on the basis of a large number of regenerants. For their further growth prior to planting on the Institute test site hydroponic units installed at the artificial climate station are used. This ensures equal conditions of nutrition and moisturizing for all the regenerants planted. Little plants cultivated in vitro, which are acquired at this stage of the work, will be further used for genetic transformation. A gene

  1. Seed shadow of Swietenia macrophylla remnant trees in a Mexican rainforest: Implications for forest management


    Alcalá, Raúl E.; Alonso, Roxalma L.; Gutiérrez-Granados, Gabriel


    The understanding of processes affecting the regeneration and coexistence of tree species is of high concern in tropical landscapes disturbed by anthropogenic activities. In this study, we evaluated the seed shadow of eight small remnant Swietenia macrophylla trees to determine the possible consequences of selective logging on the first stages of natural regeneration. We expected to find a restricted dispersal ability and a marked loss of seeds due to biotic interactions. To test this, seed s...

  2. Bionanomaterials for skin regeneration

    CERN Document Server

    Leonida, Mihaela D


    This book gives a concise overview of bionanomaterials with applications for skin regeneration. The advantages and challenges of nanoscale materials are covered in detail, giving a basic view of the skin structure and conditions that require transdermal or topical applications. Medical applications, such as wound healing, care for burns, skin disease, and cosmetic care, such as aging of the skin and photodamage, and how they benefit from bionanomaterials, are described in detail. A final chapter is devoted to the ethical and social issues related to the use of bionanomaterials for skin regeneration. This is an ideal book for researchers in materials science, medical scientists specialized in dermatology, and cosmetic chemists working in formulations. It can also serve as a reference for nanotechnologists, dermatologists, microbiologists, engineers, and polymer chemists, as well as students studying in these fields.

  3. Biomaterials for cardiac regeneration

    CERN Document Server

    Ruel, Marc


    This book offers readers a comprehensive biomaterials-based approach to achieving clinically successful, functionally integrated vasculogenesis and myogenesis in the heart. Coverage is multidisciplinary, including the role of extracellular matrices in cardiac development, whole-heart tissue engineering, imaging the mechanisms and effects of biomaterial-based cardiac regeneration, and autologous bioengineered heart valves. Bringing current knowledge together into a single volume, this book provides a compendium to students and new researchers in the field and constitutes a platform to allow for future developments and collaborative approaches in biomaterials-based regenerative medicine, even beyond cardiac applications. This book also: Provides a valuable overview of the engineering of biomaterials for cardiac regeneration, including coverage of combined biomaterials and stem cells, as well as extracellular matrices Presents readers with multidisciplinary coverage of biomaterials for cardiac repair, including ...

  4. Regeneration of Optic Nerve

    Directory of Open Access Journals (Sweden)

    Kwok-Fai So


    Full Text Available The optic nerve is part of the central nervous system (CNS and has a structure similar to other CNS tracts. The axons that form the optic nerve originate in the ganglion cell layer of the retina and extend through the optic tract. As a tissue, the optic nerve has the same organization as the white matter of the brain in regard to its glia. There are three types of glial cells: Oligodendrocytes, astrocytes, and microglia. Little structural and functional regeneration of the CNS takes place spontaneously following injury in adult mammals. In contrast, the ability of the mammalian peripheral nervous system (PNS to regenerate axons after injury is well documented. A number of factors are involved in the lack of CNS regeneration, including: (i the response of neuronal cell bodies against the damage; (ii myelin-mediated inhibition by oligodendrocytes; (iii glial scarring, by astrocytes; (iv macrophage infiltration; and (v insufficient trophic factor support. The fundamental difference in the regenerative capacity between CNS and PNS neuronal cell bodies has been the subject of intensive research. In the CNS the target normally conveys a retrograde trophic signal to the cell body. CNS neurons die because of trophic deprivation. Damage to the optic nerve disconnects the neuronal cell body from its target-derived trophic peptides, leading to the death of retinal ganglion cells. Furthermore, the axontomized neurons become less responsive to the peptide trophic signals they do receive. On the other hand, adult PNS neurons are intrinsically responsive to neurotrophic factors and do not lose trophic responsiveness after axotomy. In this talk different strategies to promote optic-nerve regeneration in adult mammals are reviewed. Much work is still needed to resolve many issues. This is a very important area of neuroregeneration and neuroprotection, as currently there is no cure after traumatic optic nerve injury or retinal disease such as glaucoma, which

  5. Women in Shape Modeling Workshop

    CERN Document Server

    Tari, Sibel


    Presenting the latest research from the growing field of mathematical shape analysis, this volume is comprised of the collaborations of participants of the Women in Shape Modeling (WiSh) workshop, held at UCLA's Institute for Pure and Applied Mathematics in July 2013. Topics include: Simultaneous spectral and spatial analysis of shape Dimensionality reduction and visualization of data in tree-spaces, such as classes of anatomical trees like airways and blood vessels Geometric shape segmentation, exploring shape segmentation from a Gestalt perspective, using information from the Blum medial axis of edge fragments in an image Representing and editing self-similar details on 3D shapes, studying shape deformation and editing techniques Several chapters in the book directly address the problem of continuous measures of context-dependent nearness and right shape models. Medical and biological applications have been a major source of motivation in shape research, and key topics are examined here in detail. All...

  6. Flowering Trees

    Indian Academy of Sciences (India)

    Berrya cordifolia (Willd.) Burret (Syn. B. ammonilla Roxb.) – Trincomali Wood of Tiliaceae is a tall evergreen tree with straight trunk, smooth brownish-grey bark and simple broad leaves. Inflorescence is much branched with white flowers. Stamens are many with golden yellow anthers. Fruit is a capsule with six spreading ...

  7. Flowering Trees

    Indian Academy of Sciences (India)

    Canthium parviflorum Lam. of Rubiaceae is a large shrub that often grows into a small tree with conspicuous spines. Leaves are simple, in pairs at each node and are shiny. Inflorescence is an axillary few-flowered cymose fascicle. Flowers are small (less than 1 cm across), 4-merous and greenish-white. Fruit is ellipsoid ...

  8. Flowering Trees

    Indian Academy of Sciences (India)

    Celtis tetrandra Roxb. of Ulmaceae is a moderately large handsome deciduous tree with green branchlets and grayish-brown bark. Leaves are simple with three to four secondary veins running parallel to the mid vein. Flowers are solitary, male, female and bisexual and inconspicuous. Fruit is berry-like, small and globose ...

  9. Flowering Trees

    Indian Academy of Sciences (India)

    IAS Admin

    Aglaia elaeagnoidea (A.Juss.) Benth. of Meliaceae is a small-sized evergreen tree of both moist and dry deciduous forests. The leaves are alternate and pinnately compound, terminating in a single leaflet. Leaflets are more or less elliptic with entire margin. Flowers are small on branched inflorescence. Fruit is a globose ...

  10. Flowering Trees

    Indian Academy of Sciences (India)

    mid-sized slow-growing evergreen tree with spreading branches that form a dense crown. The bark is smooth, thick, dark and flakes off in large shreds. Leaves are thick, oblong, leathery and bright red when young. The female flowers are drooping and are larger than male flowers. Fruit is large, red in color and velvety.

  11. Flowering Trees

    Indian Academy of Sciences (India)

    Andira inermis (wright) DC. , Dog Almond of Fabaceae is a handsome lofty evergreen tree. Leaves are alternate and pinnately compound with 4–7 pairs of leaflets. Flowers are fragrant and are borne on compact branched inflorescences. Fruit is ellipsoidal one-seeded drupe that is peculiar to members of this family.

  12. Flowering Trees

    Indian Academy of Sciences (India)

    narrow towards base. Flowers are large and attrac- tive, but emit unpleasant foetid smell. They appear in small numbers on erect terminal clusters and open at night. Stamens are numerous, pink or white. Style is slender and long, terminating in a small stigma. Fruit is green, ovoid and indistinctly lobed. Flowering Trees.

  13. Flowering Trees

    Indian Academy of Sciences (India)

    Muntingia calabura L. (Singapore cherry) of. Elaeocarpaceae is a medium size handsome ever- green tree. Leaves are simple and alternate with sticky hairs. Flowers are bisexual, bear numerous stamens, white in colour and arise in the leaf axils. Fruit is a berry, edible with several small seeds embedded in a fleshy pulp ...

  14. ~{owering 'Trees

    Indian Academy of Sciences (India)

    . Stamens are fused into a purple staminal tube that is toothed. Fruit is about 0.5 in. across, nearly globose, generally 5-seeded, green but yellow when ripe, quite smooth at first but wrinkled in drying, remaining long on the tree ajier ripening.

  15. Tree Mortality (United States)

    Mark J. Ambrose


    Tree mortality is a natural process in all forest ecosystems. However, extremely high mortality also can be an indicator of forest health issues. On a regional scale, high mortality levels may indicate widespread insect or disease problems. High mortality may also occur if a large proportion of the forest in a particular region is made up of older, senescent stands....

  16. Flowering Trees

    Indian Academy of Sciences (India)

    Guaiacum officinale L. (LIGNUM-VITAE) of Zygophyllaceae is a dense-crowned, squat, knobbly, rough and twisted medium-sized ev- ergreen tree with mottled bark. The wood is very hard and resinous. Leaves are compound. The leaflets are smooth, leathery, ovate-ellipti- cal and appear in two pairs. Flowers (about 1.5.

  17. Successful stock production for forest regeneration: What foresters should ask nursery managers about their crops (and vice versa) (United States)

    R.K. Dumroese; D.F. Jacobs; T.D. Landis


    Forest regeneration is a cyclic operation. Seeds are collected from mature trees and planted in nurseries so that the resulting seedlings can be outplanted to the forest after the mature trees are harvested. Similarly, the process of deciding upon, and growing, the best seedlings for that site should be a cyclic process between foresters and nursery managers. The ideal...

  18. A robotic vision system to measure tree traits (United States)

    The autonomous measurement of tree traits, such as branching structure, branch diameters, branch lengths, and branch angles, is required for tasks such as robotic pruning of trees as well as structural phenotyping. We propose a robotic vision system called the Robotic System for Tree Shape Estimati...

  19. Interactive design of probability density functions for shape grammars

    KAUST Repository

    Dang, Minh; Lienhard, Stefan; Ceylan, Duygu; Neubert, Boris; Wonka, Peter; Pauly, Mark


    A shape grammar defines a procedural shape space containing a variety of models of the same class, e.g. buildings, trees, furniture, airplanes, bikes, etc. We present a framework that enables a user to interactively design a probability density

  20. A Microfabricated Segmented-Involute-Foil Regenerator for Enhancing Reliability and Performance of Stirling Engines (United States)

    Ibrahim, Mounir; Danila, Daniel; Simon, Terrence; Mantell, Susan; Sun, Liyong; Gadeon, David; Qiu, Songgang; Wood, Gary; Kelly, Kevin; McLean, Jeffrey


    An actual-size microfabricated regenerator comprised of a stack of 42 disks, 19 mm diameter and 0.25 mm thick, with layers of microscopic, segmented, involute-shaped flow channels was fabricated and tested. The geometry resembles layers of uniformly-spaced segmented-parallel-plates, except the plates are curved. Each disk was made from electro-plated nickel using the LiGA process. This regenerator had feature sizes close to those required for an actual Stirling engine but the overall regenerator dimensions were sized for the NASA/Sunpower oscillating-flow regenerator test rig. Testing in the oscillating-flow test rig showed the regenerator performed extremely well, significantly better than currently used random-fiber material, producing the highest figures of merit ever recorded for any regenerator tested in that rig over its approximately 20 years of use.

  1. Tree competition and species coexistence in a Quercus--Betula forest in the Dongling Mountains in northern China (United States)

    Hou, Ji-hua; Mi, Xiang-cheng; Liu, Can-ran; Ma, Ke-ping


    The population size structure, growth dynamics and mode of competition among adult trees (≥ 4 cm DBH) of six abundant tree species in a 5 ha study plot of a temperate deciduous forest in the Dongling Mountains in northern China were investigated using diffusion and growth dynamics models. In the year of 2000, two dominant species, Quercus liaotungensis and Betula dahurica accounted for ca. 68.69% of the total basal area and 52.71% of the total density of adult plants. Q. liaotungensis, Populus davidiana and Acer mono exhibited inverse J-shaped DBH distributions whereas Betula dahurica, B. platyphylla and Salix caprea had unimodal DBH distributions. One-sided interspecific competition was detected between some species combinations at the scale of the 5 ha study plot, and the competitive effect was mainly size-dependent rather than from species-specific interactions with large individuals in the canopy layer out competing smaller individuals in the understory. Symmetric competition was found between Q. liaotungensis and A. mono only. However, considering the straight line relationship of G ( t, x) - √{D(t, x)}, which suggests that competitive asymmetry is very low or absent, combined with the relatively low mortality of trees with a DBH larger than 4 cm, we speculate that asymmetric interspecific competition was not important in structuring this tree community. Regeneration characteristics of each species are most likely important in regulating species coexistence and stand dynamics in this forest.

  2. Ecology and Conservation of the Critically Endangered Tree Species Gymnocladus assamicus in Arunachal Pradesh, India

    International Nuclear Information System (INIS)

    Choudhury, B.I.; Khan, M.L.; Arunachalam, A.; Das, A.K.


    Gymnocladus assamicus is a critically endangered leguminous tree species endemic to Northeast India. Mature pods of the trees yield soap material and are collected by local people for domestic purposes and religious activities. G. assamicus grows on hill slopes and along banks of streams. Male and hermaphrodite flowers are borne by separate individual trees. Altogether 28 mature trees were documented from nine populations. Of these, very few regenerating trees were found. This species regenerates only through seeds. The major constraints to natural regeneration are over harvesting of mature fruits, habitat destruction, grazing, predation of seeds by scatter-hoarding animals, poor percentage of seed germination due to their hard-waxy seed coats, and the lack of seed dispersal. Effective conservation initiatives should emphasize sustainable harvesting of mature pods, awareness among local people, and preservation of surviving individuals of the species. Nonetheless, reintroduction of the species to suitable ecological habitats is also recommended.

  3. Forest structure, diversity and regeneration potential along altitudinal gradient in Dhanaulti of Garhwal Himalaya

    Energy Technology Data Exchange (ETDEWEB)

    Saha, S.; Rajwar, G.S.; Kumar, M.


    Aim of the study: The aim of the present study was to understatnd the forest composition, structure, diversity and regeneration potential along altitudinal gradient. Area of study: The study was carried out in Dhanaulti forest which falls under temperate region of Garhwal Himalaya in Uttarakhand state, India. Material and Methods: Vegetation analysis was carried out using 10 quadrats at each altitude using a quadrate size of 10×10 m2. In each quadrate, categories of trees >30 cm cbh were considered as trees, 10-30cm cbh as saplings and <10 cm cbh as seedlings. The data were quantitatively analyzed. Main results: In upper and middle altitudes, Cedrus deodara was reported dominant tree whereas, in lower altitude Quercus leucotrichophora was reported dominant. Tree density was highest in lower altitude which reduced middle and upper altitudes whereas, total basal cover increased with increasing altitude. The increasing total basal cover with altitude could be because of the presence of Cedrus deodara trees having higher girth classes. In tree, sapling and seedling layers, diversity (H) and equitabiltiy (EC) decreased with increasing altitude. However, concentrations of dominace (CD) and beta diversity (BD have shown reverse trend with H and EC which increased with increasing altitudes, in each layer of tree, sapling and seedling. The distribution pattern of most species in all layers of trees, saplings and seedlings was contagious. The regeneration potential of the species has shown that some of the species in the absence of tree layer are still regenerating particularly, Rhododendron arboreum, Benthamidia capitata, Neolitsea pallens etc. It indicates that most of the species are shifting upward as they are getting suitable conditions. Research highlights: Altitude influence species composition, diversity and regeneration potential of species. (Author)

  4. Decellularized Swine Dental Pulp as a Bioscaffold for Pulp Regeneration

    Directory of Open Access Journals (Sweden)

    Lei Hu


    Full Text Available Endodontic regeneration shows promise in treating dental pulp diseases; however, no suitable scaffolds exist for pulp regeneration. Acellular natural extracellular matrix (ECM is a favorable scaffold for tissue regeneration since the anatomical structure and ECM of the natural tissues or organs are well-preserved. Xenogeneic ECM is superior to autologous or allogeneic ECM in tissue engineering for its unlimited resources. This study investigated the characteristics of decellularized dental pulp ECM from swine and evaluated whether it could mediate pulp regeneration. Dental pulps were acquired from the mandible anterior teeth of swine 12 months of age and decellularized with 10% sodium dodecyl sulfate (SDS combined with Triton X-100. Pulp regeneration was conducted by seeding human dental pulp stem cells into decellularized pulp and transplanted subcutaneously into nude mice for 8 weeks. The decellularized pulp demonstrated preserved natural shape and structure without any cellular components. Histological analysis showed excellent ECM preservation and pulp-like tissue, and newly formed mineralized tissues were regenerated after being transplanted in vivo. In conclusion, decellularized swine dental pulp maintains ECM components favoring stem cell proliferation and differentiation, thus representing a suitable scaffold for improving clinical outcomes and functions of teeth with dental pulp diseases.

  5. Decellularized Swine Dental Pulp as a Bioscaffold for Pulp Regeneration. (United States)

    Hu, Lei; Gao, Zhenhua; Xu, Junji; Zhu, Zhao; Fan, Zhipeng; Zhang, Chunmei; Wang, Jinsong; Wang, Songlin


    Endodontic regeneration shows promise in treating dental pulp diseases; however, no suitable scaffolds exist for pulp regeneration. Acellular natural extracellular matrix (ECM) is a favorable scaffold for tissue regeneration since the anatomical structure and ECM of the natural tissues or organs are well-preserved. Xenogeneic ECM is superior to autologous or allogeneic ECM in tissue engineering for its unlimited resources. This study investigated the characteristics of decellularized dental pulp ECM from swine and evaluated whether it could mediate pulp regeneration. Dental pulps were acquired from the mandible anterior teeth of swine 12 months of age and decellularized with 10% sodium dodecyl sulfate (SDS) combined with Triton X-100. Pulp regeneration was conducted by seeding human dental pulp stem cells into decellularized pulp and transplanted subcutaneously into nude mice for 8 weeks. The decellularized pulp demonstrated preserved natural shape and structure without any cellular components. Histological analysis showed excellent ECM preservation and pulp-like tissue, and newly formed mineralized tissues were regenerated after being transplanted in vivo. In conclusion, decellularized swine dental pulp maintains ECM components favoring stem cell proliferation and differentiation, thus representing a suitable scaffold for improving clinical outcomes and functions of teeth with dental pulp diseases.

  6. Regeneration complexities of Pinus gerardiana in dry temperate forests of Indian Himalaya. (United States)

    Kumar, Raj; Shamet, G S; Mehta, Harsh; Alam, N M; Kaushal, Rajesh; Chaturvedi, O P; Sharma, Navneet; Khaki, B A; Gupta, Dinesh


    Pinus gerardiana is considered an important species in dry temperate forests of North-Western Indian Himalaya because of its influence on ecological processes and economic dependence of local people in the region. But, large numbers of biotic and abiotic factors have affected P. gerardiana in these forests; hence, there is a crucial need to understand the regeneration dynamics of this tree species. The present investigation was conducted in P. gerardiana forests to understand vegetation pattern and regeneration processes on different sites in the region. Statistical analysis was performed to know variability in growing stock and regeneration on sample plots, while correlation coefficients and regression models were developed to find the relationship between regeneration and site factors. The vegetation study showed dominance of P. gerardiana, which is followed by Cedrus deodara, Pinus wallichiana and Quercus ilex in the region. The growing stock of P. gerardiana showed steep increasing and then steadily declining trend from lower to higher diameter class. The distribution of seedling, sapling, pole and trees was not uniform at different sites and less number of plots in each site were observed to have effective conditions for continuous regeneration, but mostly showed extremely limited regeneration. Regeneration success ranging from 8.44 to 15.93 % was recorded in different sites of the region, which suggests that in different sites regeneration success is influenced by collection of cone for extracting seed, grazing/browsing and physico-chemical properties of soil. Regeneration success showed significant correlation and relationship with most of abiotic and biotic factors. The regeneration success is lower than the requirement of sustainable forest, but varies widely among sites in dry temperate forests of Himalaya. More forest surveys are required to understand the conditions necessary for greater success of P. gerardiana in the region.

  7. Understanding Urban Regeneration in Turkey (United States)

    Candas, E.; Flacke, J.; Yomralioglu, T.


    In Turkey, rapid population growth, informal settlements, and buildings and infrastructures vulnerable to natural hazards are seen as the most important problems of cities. Particularly disaster risk cannot be disregarded, as large parts of various cities are facing risks from earthquakes, floods and landslides and have experienced loss of lives in the recent past. Urban regeneration is an important planning tool implemented by local and central governments in order to reduce to disaster risk and to design livable environments for the citizens. The Law on the Regeneration of Areas under Disaster Risk, commonly known as the Urban Regeneration Law, was enacted in 2012 (Law No.6306, May 2012). The regulation on Implementation of Law No. 6306 explains the fundamental steps of the urban regeneration process. The relevant institutions furnished with various authorities such as expropriation, confiscation and changing the type and place of your property which makes urban regeneration projects very important in terms of property rights. Therefore, urban regeneration projects have to be transparent, comprehensible and acceptable for all actors in the projects. In order to understand the urban regeneration process, the legislation and projects of different municipalities in Istanbul have been analyzed. While some steps of it are spatial data demanding, others relate to land values. In this paper an overview of the urban regeneration history and activities in Turkey is given. Fundamental steps of the urban regeneration process are defined, and particularly spatial-data demanding steps are identified.

  8. Microbiological soil regeneration

    International Nuclear Information System (INIS)

    Behrens, D.; Wiesner, J.


    The Interdiciplinary Task Force ''Environmental Biotechnology - Soil'' of DECHEMA aims to pool the knowledge potential of the Dechema study committees on environmental biotechnology and soil protection with a view to the advancement of microbiological soil decontamination techniques. This conference volume on the 9th expert meeting of Dechema on environmental protection subjects entitled ''Microbiological Soil Regeneration'', held on February 27th and 28th, 1991, and the subsequent compilation of results give an intermediate account of the ongoing work of the Dechema Task Force. (orig.) [de

  9. Surface tree languages and parallel derivation trees

    NARCIS (Netherlands)

    Engelfriet, Joost


    The surface tree languages obtained by top-down finite state transformation of monadic trees are exactly the frontier-preserving homomorphic images of sets of derivation trees of ETOL systems. The corresponding class of tree transformation languages is therefore equal to the class of ETOL languages.

  10. Regeneration of desiccants with solar energy

    Energy Technology Data Exchange (ETDEWEB)

    Ghate, S.R.; Butts, C.L.; Lown, J.B.


    Saturated silica gel was regenerated with solar energy. This paper describes the experimental set-up for silica gel regeneration and data collection. The regenerated silica gel can be used to dry high moisture in-shell pecans.

  11. Regeneration Responses to Management for Old-Growth Characteristics in Northern Hardwood-Conifer Forests

    Directory of Open Access Journals (Sweden)

    Aviva J. Gottesman


    Full Text Available Successful tree regeneration is essential for sustainable forest management, yet it can be limited by the interaction of harvesting effects and multiple ecological drivers. In northern hardwood forests, for example, there is uncertainty whether low-intensity selection harvesting techniques will result in adequate and desirable regeneration. Our research is part of a long-term study that tests the hypothesis that a silvicultural approach called “structural complexity enhancement” (SCE can accelerate the development of late-successional forest structure and functions. Our objective is to understand the regeneration dynamics following three uneven-aged forestry treatments with high levels of retention: single-tree selection, group selection, and SCE. Regeneration density and diversity can be limited by differing treatment effects on or interactions among light availability, competitive environment, substrate, and herbivory. To explore these relationships, manipulations and controls were replicated across 2 ha treatment units at two Vermont sites. Forest inventory data were collected pre-harvest and periodically over 13 years post-harvest. We used mixed effects models with repeated measures to evaluate the effect of treatment on seedling and sapling density and diversity (Shannon–Weiner H’. The treatments were all successful in recruiting a sapling class with significantly greater sapling densities compared to the controls. However, undesirable and prolific beech (Fagus americana sprouting dominates some patches in the understory of all the treatments, creating a high degree of spatial variability in the competitive environment for regeneration. Multivariate analyses suggest that while treatment had a dominant effect, other factors were influential in driving regeneration responses. These results indicate variants of uneven-aged systems that retain or enhance elements of stand structural complexity—including old-growth characteristics

  12. Seed rain, soil seed bank, seed loss and regeneration of Castanopsis fargesii (Fagaceae) in a subtropical evergreen broad-leaved forest (United States)

    Xiaojun Du; Qinfeng Guo; Xianming Gao; Keping Na


    Understanding the seed rain and seed loss dynamics in the natural condition has important significance for revealing the natural regeneration mechanisms.We conducted a 3-year field observation on seed rain, seed loss and natural regeneration of Castanopsis fargesii Franch., a dominant tree species in evergreen broad-leaved forests in Dujiangyan,...

  13. Manipulations to regenerate aspen ecosystems (United States)

    Wayne D. Shepperd


    Vegetative regeneration of aspen can be initiated through manipulations that provide hormonal stimulation, proper growth environment, and sucker protection - the three elements of the aspen regeneration triangle. The correct course of action depends upon a careful evaluation of the size, vigor, age, and successional status of the existing clone. Soils and site...

  14. Earthworm abundance and species composition in abandoned tropical croplands: comparisons of tree plantations and secondary forests. (United States)

    G. Gonzalez; X. Zou; S. Borges


    We compared patterns of earthworms abundance and species composition in tree plantation and secondary forest of Puerto Rico. Tree plantations included pine (Pinus caribea Morelet) and mahogany (Swietenia macrophylla King) established in the 1930's; 1960's; and 1970's; secondary forests were naturally regenerated in areas adjacent to these plantations. We...

  15. Crop tree release options for young hardwood stands in North Carolina (United States)

    Jamie L. Schuler; Daniel J. Robison


    Harvesting southern hardwood forests using even-aged reproduction methods commonly regenerate new stands with 20,000 to 50,000 stems per acre. Overstocking and an overabundance of non-commercial tree species are considered major constraints to growing productive and valuable hardwoods. Crop tree release practices have been promoted as an efficient way of thinning young...

  16. Tree dynamics in canopy gaps in old-growth forests of Nothofagus pumilio in Southern Chile

    NARCIS (Netherlands)

    Fajardo, Alex; Graaf, de N.R.


    The gap dynamics of two Nothofagus pumilio (lenga) stands have been investigated. We evaluated and compared tree diameter distributions, spatial patterns, tree fall and gap characteristics and regeneration responses in gaps in two old-growth forests of Nothofagus pumilio in Southern Chile

  17. Tree planting by small producers in the tropics: A comparative study of Brazil and Panama. (United States)

    Cynthia S. Simmons; Robert T. Walker; Charles H. Wood


    Forest regrowth is a notable phenomenon across the tropical forest latitudes. Such reforestation takes place in the wake of land abandonment, occurs cyclically in a rotational agricultural system, and may result from the deliberate planting of trees by farmers. Although less extensive than successional forest regeneration, tree planting by small farmers can have...

  18. Acoustic field modulation in regenerators (United States)

    Hu, J. Y.; Wang, W.; Luo, E. C.; Chen, Y. Y.


    The regenerator is a key component that transfers energy between heat and work. The conversion efficiency is significantly influenced by the acoustic field in the regenerator. Much effort has been spent to quantitatively determine this influence, but few comprehensive experimental verifications have been performed because of difficulties in modulating and measuring the acoustic field. In this paper, a method requiring two compressors is introduced and theoretically investigated that achieves acoustic field modulation in the regenerator. One compressor outputs the acoustic power for the regenerator; the other acts as a phase shifter. A RC load dissipates the acoustic power out of both the regenerator and the latter compressor. The acoustic field can be modulated by adjusting the current in the two compressors and opening the RC load. The acoustic field is measured with pressure sensors instead of flow-field imaging equipment, thereby greatly simplifying the experiment.

  19. Motor Axonal Regeneration After Partial and Complete Spinal Cord Transection (United States)

    Lu, Paul; Blesch, Armin; Graham, Lori; Wang, Yaozhi; Samara, Ramsey; Banos, Karla; Haringer, Verena; Havton, Leif; Weishaupt, Nina; Bennett, David; Fouad, Karim; Tuszynski, Mark H.


    We subjected rats to either partial mid-cervical or complete upper thoracic spinal cord transections and examined whether combinatorial treatments support motor axonal regeneration into and beyond the lesion. Subjects received cAMP injections into brainstem reticular motor neurons to stimulate their endogenous growth state, bone marrow stromal cell grafts in lesion sites to provide permissive matrices for axonal growth, and brain-derived neurotrophic factor (BDNF) gradients beyond the lesion to stimulate distal growth of motor axons. Findings were compared to several control groups. Combinatorial treatment generated motor axon regeneration beyond both C5 hemisection and complete transection sites. Yet despite formation of synapses with neurons below the lesion, motor outcomes worsened after partial cervical lesions and spasticity worsened after complete transection. These findings highlight the complexity of spinal cord repair, and the need for additional control and shaping of axonal regeneration. PMID:22699902

  20. Constraints and opportunities for tree diversity management along the forest transition curve to achieve multifunctional agriculture

    NARCIS (Netherlands)

    Ordonez, J.C.; Luedeling, E.; Kindt, R.; Tata, H.L.; Harja, D.; Jamnadass, R.; Noordwijk, van M.


    On-farm tree diversity patterns result from a social-ecological process shaped by different actors. Farmer preferences, tree-site matching, seed dispersal, tree domestication and delivery via nurseries all play important roles in forming these patterns. As part of a wider interest in tree cover

  1. Ficus religiosa L. (English: Peepal tree or sacred fig; Hindi: Pippal ...

    Indian Academy of Sciences (India)

    Ficus religiosa L. (English: Peepal tree or sacred fig; Hindi: Pippal) of Moraceae is a large deciduous tree that grows wild as well as cultivated. The picture shows the tree with fresh flush of leaves. The tree is planted chiefly near the temples by Hindus and Buddhists who regard it as sacred. The characteristic heart-shaped ...

  2. Ponderosa pine seed-tree removal reduces stocking only slightly (United States)

    Philip M. McDonald


    After ponderosa pine seed trees were removed on the Challenge Experimental Forest, California, seedling stocking fell by 3.8 percent or about 212 seedlings per acre. This loss is slightly less than that incurred from natural mortality, and one that did not reduce regeneration levels below the minimum standard.

  3. Measuring Tree Seedlings and Associated Understory Vegetation in Pennsylvania's Forests (United States)

    William H. McWilliams; Todd W. Bowersox; Patrick H. Brose; Daniel A. Devlin; James C. Finley; Kurt W. Gottschalk; Steve Horsley; Susan L. King; Brian M. LaPoint; Tonya W. Lister; Larry H. McCormick; Gary W. Miller; Charles T. Scott; Harry Steele; Kim C. Steiner; Susan L. Stout; James A. Westfall; Robert L. White


    The Northeastern Research Station's Forest Inventory and Analysis (NE-FIA) unit is conducting the Pennsylvania Regeneration Study (PRS) to evaluate composition and abundance of tree seedlings and associated vegetation. Sampling methods for the PRS were tested and developed in a pilot study to determine the appropriate number of 2-m microplots needed to capture...

  4. Fundamental geodesic deformations in spaces of treelike shapes

    DEFF Research Database (Denmark)

    Feragen, Aasa; Lauze, Francois Bernard; Nielsen, Mads


    This paper presents a new geometric framework for analysis of planar treelike shapes for applications such as shape matching, recognition and morphology, using the geometry of the space of treelike shapes. Mathematically, the shape space is given the structure of a stratified set which...... is a quotient of a normed vector space with a metric inherited from the vector space norm. We give examples of geodesic paths in tree-space corresponding to fundamental deformations of small trees, and discuss how these deformations are key building blocks for understanding deformations between larger trees....

  5. Seeing the forest for the homogeneous trees: stand-scale resource distributions emerge from tree-scale structure (United States)

    Suzanne Boyden; Rebecca Montgomery; Peter B. Reich; Brian J. Palik


    Forest ecosystem processes depend on local interactions that are modified by the spatial pattern of trees and resources. Effects of resource supplies on processes such as regeneration are increasingly well understood, yet we have few tools to compare resource heterogeneity among forests that differ in structural complexity. We used a neighborhood approach to examine...

  6. Short-Term Effects of Reduced-Impact Logging on Copaifera spp. (Fabaceae Regeneration in Eastern Amazon

    Directory of Open Access Journals (Sweden)

    Carine Klauberg


    Full Text Available Timber management directly influences the population dynamics of tree species, like Copaifera spp. (copaíba, which provide oil-resin with ecological and economic importance. The aim of this study was to evaluate the structure and population dynamics of Copaifera in unmanaged and managed stands by reduced-impact logging (RIL in eastern Amazon in Pará state, Brazil. Based on a stem map of the study area, 40 Copaifera trees were randomly selected, where an equal number of trees were selected in managed and unmanaged stands. A transect of 10 × 100 m was centered at each tree (50 m each side to assess Copaifera regeneration. Transects were subdivided into ten plots, of which six were systematically chosen to assess the height, diameter and number of Copaifera seedlings and saplings. The field assessment occurred in 2011 and 2013. To estimate the amount of sunlight transmitted to the forest floor, we computed canopy cover from airborne LiDAR data. According to the results, the abundance of Copaifera seedlings/saplings was higher in managed than unmanaged stands. About 5% of Copaifera regeneration was found between 45–50 m from the Copaifera tree while ~73% of regeneration was concentrated within a 10 m radius of the Copaifera tree. We verified that the diameter distribution of Copaifera regeneration was not a negative exponential distribution, as is typical of most tree species in natural forest. Rather, the Copaifera regeneration had a spatially aggregated distribution. In this short-term analysis, the impact of timber management is not negatively affecting the population structure or dynamics of Copaifera regeneration.

  7. Results from neutral kaon regeneration at high energies

    International Nuclear Information System (INIS)

    Hladky, J.


    Experimental neutral kaon regeneration results at Serpukhov energies up to 50 GeV are presented, including the coherent regeneration on hydrogen, deuterium and carbon regenerators and elastic regeneration on deuterium and carbon regenerators. (author)

  8. Modular tree automata

    DEFF Research Database (Denmark)

    Bahr, Patrick


    Tree automata are traditionally used to study properties of tree languages and tree transformations. In this paper, we consider tree automata as the basis for modular and extensible recursion schemes. We show, using well-known techniques, how to derive from standard tree automata highly modular...

  9. Simple street tree sampling (United States)

    David J. Nowak; Jeffrey T. Walton; James Baldwin; Jerry. Bond


    Information on street trees is critical for management of this important resource. Sampling of street tree populations provides an efficient means to obtain street tree population information. Long-term repeat measures of street tree samples supply additional information on street tree changes and can be used to report damages from catastrophic events. Analyses of...

  10. Regeneration in bottomland forest canopy gaps 6 years after variable retention harvests to enhance wildlife habitat (United States)

    Daniel J. Twedt; Scott G. Somershoe


    To promote desired forest conditions that enhance wildlife habitat in bottomland forests, managers prescribed and implemented variable-retention harvest, a.k.a. wildlife forestry, in four stands on Tensas River National Wildlife Refuge, LA. These treatments created canopy openings (gaps) within which managers sought to regenerate shade-intolerant trees. Six years after...

  11. Managing Appalachian hardwood stands using four regeneration practices--34 year results (United States)

    H. Clay Smith; Gary W. Miller


    Adjacent Appalachian hardwood stands in West Virginia established on excellent growing sites were managed for a 34-year period using four regeneration practices. These practices included a commercial clearcut, 15.5-in diameter-limit, and two single-tree selection practices. An uncut area was maintained as a control. Stand development, growth response, and some stumpage...

  12. Impact of postfire management on forest regeneration in a managed hemiboreal forest, Estonia (United States)

    Kristi Parro; Marek Metslaid; Getter Renel; Allan Sims; John Stanturf; Kalev Jogiste; Kajar Koster


    Fire is a significant agent for the development of boreal and hemiboreal forests, altering soil and light conditions, affecting seedbanks, and removing seed trees. Burned areas should be managed with care, as inappropriate techniques prolong the regeneration period and reduce the diversity and resilience of stands to disturbances. To study the effects of fire and...

  13. Establishment of the regeneration system for Vicia faba L. (United States)

    Bahgat, Shimaa; Shabban, Omer A; El-Shihy, Osama; Lightfoot, David A; El-Shemy, Hany A


    A reliable regeneration system for faba bean has been difficult to establish and therefore, the genetic improvement of Vicia faba L. was delayed. The paper describes a method of somatic embryo induction in callus of V. faba. Two Egyptian faba bean cultivars 'Giza 2' and '24 Hyto' were used. Callus was induced from epicotyls and shoot tips cultured on MS or Gamborg medium supplemented with 3% sucrose and 0.025% (w/v) for each of ascorbic and citric acid, 0.8% agar and different concentrations of 10 mg/l BAP, 0.5 mg/l of each NAA and 2,4-dichlorophenoxyacetic acid (M1) and 1 mg/l BAP and 0.5 mg/l NAA (M2) . The media with BAP, NAA and 2,4-D were optimal for embryogenic callus induction. Somatic embryos developed after transfer of the callus to 1/2 B5 medium with no plant growth regulators. There were various stages of somatic embryo development present including globular, heart-shaped, torpedo, and cotyledonary stages. Embryos developed into plantlets and plants were regenerated. RAPD analyses were performed to investigate the genetic stability of the regenerated plants obtained from different treatments and different explants. The cultivar Giza 2 exhibited more genetic stability than cultivar 24 Hyto. In conclusion, a regeneration system was established suitable for both gene transformation and the isolation of somaclonal mutants. The regeneration system will be used in order to improve the nutritional value of faba bean.

  14. The dynamics of strangling among forest trees. (United States)

    Okamoto, Kenichi W


    Strangler trees germinate and grow on other trees, eventually enveloping and potentially even girdling their hosts. This allows them to mitigate fitness costs otherwise incurred by germinating and competing with other trees on the forest floor, as well as minimize risks associated with host tree-fall. If stranglers can themselves host other strangler trees, they may not even seem to need non-stranglers to persist. Yet despite their high fitness potential, strangler trees neither dominate the communities in which they occur nor is the strategy particularly common outside of figs (genus Ficus). Here we analyze how dynamic interactions between strangling and non-strangling trees can shape the adaptive landscape for strangling mutants and mutant trees that have lost the ability to strangle. We find a threshold which strangler germination rates must exceed for selection to favor the evolution of strangling, regardless of how effectively hemiepiphytic stranglers may subsequently replace their hosts. This condition describes the magnitude of the phenotypic displacement in the ability to germinate on other trees necessary for invasion by a mutant tree that could potentially strangle its host following establishment as an epiphyte. We show how the relative abilities of strangling and non-strangling trees to occupy empty sites can govern whether strangling is an evolutionarily stable strategy, and obtain the conditions for strangler coexistence with non-stranglers. We then elucidate when the evolution of strangling can disrupt stable coexistence between commensal epiphytic ancestors and their non-strangling host trees. This allows us to highlight parallels between the invasion fitness of strangler trees arising from commensalist ancestors, and cases where strangling can arise in concert with the evolution of hemiepiphytism among free-standing ancestors. Finally, we discuss how our results can inform the evolutionary ecology of antagonistic interactions more generally

  15. Phylogenetic Structure of Tree Species across Different Life Stages from Seedlings to Canopy Trees in a Subtropical Evergreen Broad-Leaved Forest. (United States)

    Jin, Yi; Qian, Hong; Yu, Mingjian


    Investigating patterns of phylogenetic structure across different life stages of tree species in forests is crucial to understanding forest community assembly, and investigating forest gap influence on the phylogenetic structure of forest regeneration is necessary for understanding forest community assembly. Here, we examine the phylogenetic structure of tree species across life stages from seedlings to canopy trees, as well as forest gap influence on the phylogenetic structure of forest regeneration in a forest of the subtropical region in China. We investigate changes in phylogenetic relatedness (measured as NRI) of tree species from seedlings, saplings, treelets to canopy trees; we compare the phylogenetic turnover (measured as βNRI) between canopy trees and seedlings in forest understory with that between canopy trees and seedlings in forest gaps. We found that phylogenetic relatedness generally increases from seedlings through saplings and treelets up to canopy trees, and that phylogenetic relatedness does not differ between seedlings in forest understory and those in forest gaps, but phylogenetic turnover between canopy trees and seedlings in forest understory is lower than that between canopy trees and seedlings in forest gaps. We conclude that tree species tend to be more closely related from seedling to canopy layers, and that forest gaps alter the seedling phylogenetic turnover of the studied forest. It is likely that the increasing trend of phylogenetic clustering as tree stem size increases observed in this subtropical forest is primarily driven by abiotic filtering processes, which select a set of closely related evergreen broad-leaved tree species whose regeneration has adapted to the closed canopy environments of the subtropical forest developed under the regional monsoon climate.

  16. New perspectives on the ecology of tree structure and tree communities through terrestrial laser scanning. (United States)

    Malhi, Yadvinder; Jackson, Tobias; Patrick Bentley, Lisa; Lau, Alvaro; Shenkin, Alexander; Herold, Martin; Calders, Kim; Bartholomeus, Harm; Disney, Mathias I


    Terrestrial laser scanning (TLS) opens up the possibility of describing the three-dimensional structures of trees in natural environments with unprecedented detail and accuracy. It is already being extensively applied to describe how ecosystem biomass and structure vary between sites, but can also facilitate major advances in developing and testing mechanistic theories of tree form and forest structure, thereby enabling us to understand why trees and forests have the biomass and three-dimensional structure they do. Here we focus on the ecological challenges and benefits of understanding tree form, and highlight some advances related to capturing and describing tree shape that are becoming possible with the advent of TLS. We present examples of ongoing work that applies, or could potentially apply, new TLS measurements to better understand the constraints on optimization of tree form. Theories of resource distribution networks, such as metabolic scaling theory, can be tested and further refined. TLS can also provide new approaches to the scaling of woody surface area and crown area, and thereby better quantify the metabolism of trees. Finally, we demonstrate how we can develop a more mechanistic understanding of the effects of avoidance of wind risk on tree form and maximum size. Over the next few years, TLS promises to deliver both major empirical and conceptual advances in the quantitative understanding of trees and tree-dominated ecosystems, leading to advances in understanding the ecology of why trees and ecosystems look and grow the way they do.

  17. Muscle regeneration in mitochondrial myopathies

    DEFF Research Database (Denmark)

    Krag, T O; Hauerslev, S; Jeppesen, T D


    Mitochondrial myopathies cover a diverse group of disorders in which ragged red and COX-negative fibers are common findings on muscle morphology. In contrast, muscle degeneration and regeneration, typically found in muscular dystrophies, are not considered characteristic features of mitochondrial...... myopathies. We investigated regeneration in muscle biopsies from 61 genetically well-defined patients affected by mitochondrial myopathy. Our results show that the perturbed energy metabolism in mitochondrial myopathies causes ongoing muscle regeneration in a majority of patients, and some were even affected...

  18. Understory Structure and Vascular Plant Diversity in Naturally Regenerated Deciduous Forests and Spruce Plantations on Similar Clear-Cuts: Implications for Forest Regeneration Strategy Selection

    Directory of Open Access Journals (Sweden)

    ZhiQiang Fang


    Full Text Available The active effect of natural regeneration on understory vegetation and diversity on clear-cut forestlands, in contrast to conifer reforestation, is still controversial. Here we investigated differences in understory vegetation by comparing naturally regenerated deciduous forests (NR and reforested spruce plantations (SP aged 20–40 years on 12 similar clear-cuts of subalpine old-growth spruce-fir forests from the eastern Tibetan Plateau. We found that 283 of the 334 vascular plant species recorded were present in NR plots, while only 264 species occurred in SP plots. This was consistent with richer species, higher cover, and stem (or shoot density of tree seedlings, shrubs, and ferns in the NR plots than in the SP plots. Moreover, understory plant diversity was limited under dense canopy cover, which occurred more frequently in the SP plots. Our findings implied that natural deciduous tree regeneration could better preserve understory vegetation and biodiversity than spruce reforestation after clear-cutting. This result further informed practices to reduce tree canopy cover for spruce plantations or to integrate natural regeneration and reforestation for clear-cuts in order to promote understory vegetation and species diversity conservation.

  19. The future of large old trees in urban landscapes. (United States)

    Le Roux, Darren S; Ikin, Karen; Lindenmayer, David B; Manning, Adrian D; Gibbons, Philip


    Large old trees are disproportionate providers of structural elements (e.g. hollows, coarse woody debris), which are crucial habitat resources for many species. The decline of large old trees in modified landscapes is of global conservation concern. Once large old trees are removed, they are difficult to replace in the short term due to typically prolonged time periods needed for trees to mature (i.e. centuries). Few studies have investigated the decline of large old trees in urban landscapes. Using a simulation model, we predicted the future availability of native hollow-bearing trees (a surrogate for large old trees) in an expanding city in southeastern Australia. In urban greenspace, we predicted that the number of hollow-bearing trees is likely to decline by 87% over 300 years under existing management practices. Under a worst case scenario, hollow-bearing trees may be completely lost within 115 years. Conversely, we predicted that the number of hollow-bearing trees will likely remain stable in semi-natural nature reserves. Sensitivity analysis revealed that the number of hollow-bearing trees perpetuated in urban greenspace over the long term is most sensitive to the: (1) maximum standing life of trees; (2) number of regenerating seedlings ha(-1); and (3) rate of hollow formation. We tested the efficacy of alternative urban management strategies and found that the only way to arrest the decline of large old trees requires a collective management strategy that ensures: (1) trees remain standing for at least 40% longer than currently tolerated lifespans; (2) the number of seedlings established is increased by at least 60%; and (3) the formation of habitat structures provided by large old trees is accelerated by at least 30% (e.g. artificial structures) to compensate for short term deficits in habitat resources. Immediate implementation of these recommendations is needed to avert long term risk to urban biodiversity.

  20. Regeneration of Ksub(S)sup(0) mesons on carbon in the coherent production model

    International Nuclear Information System (INIS)

    Novak, M.


    Elastic and coherent Ksub(S)sup(0) regeneration on carbon in the kaon momentum range 10 to 50 GeV/c is calculated using the coherent production model. The ratio of the moduli of forward Ksub(S)sup(0) regeneration amplitudes on carbon and on one of its nucleons equal to 7.8+-O.4 is obtained. The result together with the published data for the coherent Ksub(S)sup(0) regeneration on carbon and hydrogen gives the value of the forward regeneration amplitude on neutrons. The calculated shape of the differential cross section for elastic Ksub(S)sup(0) regeneration on carbon is compared with the corresponding measurements. (Z.J.)

  1. Passive characterization and active testing of epoxy bonded regenerators for room temperature magnetic refrigeration

    DEFF Research Database (Denmark)

    Lei, Tian; Navickaité, Kristina; Engelbrecht, Kurt


    -layer AMR based on spherical particles is tested actively in a small reciprocating magnetic refrigerator, achieving a no-load temperature span of 16.8 °C using about 143 g of epoxy-bonded La(Fe,Mn,Si)13Hy materials. Simulations based on a one-dimensional (1D) AMR model are also implemented to validate......Epoxy bonded regenerators of both spherical and irregular La(Fe,Mn,Si)13Hy particles have been developed aiming at increasing the mechanical strength of active magnetic regenerators (AMR) loaded with brittle magnetocaloric materials and improving the flexibility of shaping the regenerator geometry....... Although the magnetocaloric properties of these materials are well studied, the flow and heat transfer characteristics of the epoxy bonded regenerators have seldom been investigated. This paper presents a test apparatus that passively characterizes regenerators using a liquid heat transfer fluid...

  2. Spatial-temporal changes in trees outside forests

    DEFF Research Database (Denmark)

    Novotný, M.; Skaloš, J.; Plieninger, T.


    Trees outside forests act as ecologically valuable elements in the rural landscapes of Europe. This study proposes a new classification system for trees outside forest elements based on the shape and size of the patches and their location in fields. Using this system, the study evaluates the spat......Trees outside forests act as ecologically valuable elements in the rural landscapes of Europe. This study proposes a new classification system for trees outside forest elements based on the shape and size of the patches and their location in fields. Using this system, the study evaluates...

  3. City of Pittsburgh Trees (United States)

    Allegheny County / City of Pittsburgh / Western PA Regional Data Center — Trees cared for and managed by the City of Pittsburgh Department of Public Works Forestry Division. Tree Benefits are calculated using the National Tree Benefit...

  4. Regenerable Carbon Filter, Phase I (United States)

    National Aeronautics and Space Administration — A Regenerable Carbon Filter (RCF) is proposed for the removal of carbonaceous particulate matter produced in Environmental Control and Life Support (ECLS) processes....

  5. Plasma skin regeneration technology. (United States)

    Bogle, M A


    Plasma skin regeneration (PSR) technology uses energy delivered from plasma rather than light or radiofrequency. Plasma is the fourth state of matter in which electrons are stripped from atoms to form an ionized gas. The plasma is emitted in a millisecond pulse to deliver energy to target tissue upon contact without reliance on skin chromophores. The technology can be used at varying energies for different depths of effect, from superficial epidermal sloughing to deeper dermal heating. With the Portrait PSR device (Rhytec, Inc.) there are three treatment guidelines termed PSR1, PSR2, and PSR3. The PSR1 protocol uses a series of low-energy treatments (1.0,1.2 Joules) spaced 3 weeks apart. The PSR2 protocol uses one high-energy pass (3.0, 4.0 Joules) performed in a single treatment, and the PSR3 protocol uses two high-energy passes (3.0 4.0 Joules) performed in a single treatment. All protocols improve fine lines, textural irregularities, and dyspigmentation; however, skin tightening is probably more pronounced with the high-energy treatments.

  6. Regeneration mechanisms in Syllidae (Annelida) (United States)

    Ribeiro, Rannyele P.


    Abstract Syllidae is one of the most species‐rich groups within Annelida, with a wide variety of reproductive modes and different regenerative processes. Syllids have striking ability to regenerate their body anteriorly and posteriorly, which in many species is redeployed during sexual (schizogamy) and asexual (fission) reproduction. This review summarizes the available data on regeneration in syllids, covering descriptions of regenerative mechanisms in different species as well as regeneration in relation to reproductive modes. Our survey shows that posterior regeneration is widely distributed in syllids, whereas anterior regeneration is limited in most of the species, excepting those reproducing by fission. The latter reproductive mode is well known for a few species belonging to Autolytinae, Eusyllinae, and Syllinae. Patterns of fission areas have been studied in these animals. Deviations of the regular regeneration pattern or aberrant forms such as bifurcated animals or individuals with multiple heads have been reported for several species. Some of these aberrations show a deviation of the bilateral symmetry and antero‐posterior axis, which, interestingly, can also be observed in the regular branching body pattern of some species of syllids. PMID:29721325

  7. Seedling regeneration on decayed pine logs after the deforestation events caused by pine wilt disease

    Directory of Open Access Journals (Sweden)

    Y. Fukasawa


    Full Text Available Coarse woody debris (CWD forms an important habitat suitable for tree seedling establishment, and the CWD decay process influences tree seedling community. In Japan, a severe dieback of Pinus densiflora Sieb. & Zucc. caused by pine wilt disease (PWD damaged huge areas of pine stands but creates huge mass of pine CWD. It is important to know the factors influencing seedling colonization on pine CWD and their variations among geographical gradient in Japan to expect forest regeneration in post-PWD stands. I conducted field surveys on the effects of latitude, climates, light condition, decay type of pine logs, and log diameter on tree seedling colonization at ten geographically distinct sites in Japan. In total, 59 tree taxa were recorded as seedlings on pine logs. Among them, 13 species were recorded from more than five sites as adult trees or seedlings and were used for the analyses. A generalized linear model showed that seedling colonization of Pinus densiflora was negatively associated with brown rot in sapwood, while that of Rhus trichocarpa was positively associated with brown rot in heartwood. Regeneration of Ilex macropoda had no relationships with wood decay type but negatively associated with latitude and MAT, while positively with log diameter. These results suggested that wood decay type is a strong determinant of seedling establishment for certain tree species, even at a wide geographical scale; however, the effect is tree species specific.

  8. Regeneratoin Development 3 Years After Thinning and Fertilization in an East Texas Bottomland Hardwood Stand (To Manage or To Regenerate: Can We Do Both?) (United States)

    Brian Roy Lockhart; Alexander J. Michalek; Matthew W. Lowe; Richard A. Williams


    Silviculture textbooks state that intermediate treatments, such as thinning, are prescribed to regulate the growing space for the benefit of existing trees and not to create enough growing space to initiate new trees of desirable species. If new, desirable regeneration develops, then it is considered a by-product of the intermediate treatment and is not to be managed,...

  9. Economic analysis of land regeneration programmes through rural cooperatives

    International Nuclear Information System (INIS)

    Reddy, B.S.; Srinivasan, P.V.; Parikh, K.S.; Parikh, J.K.


    An economic analysis of land regeneration programmes is given combining the criteria of financial as well as economic feasibility and sustainability applied to a wood plantation of Mallanahlly TGCS in Karnataka, India. Feasibility is measured in terms of economic benefits to the stakeholders and sustainability through optimal rotation of trees as well as continuous annual income to the stakeholders from such rotations. The plantation programme is evaluated at the perspectives of both TGCS and the society as a whole and it is found that benefit cost ratios are high in both the cases. (K.A.)

  10. Categorizing ideas about trees: a tree of trees. (United States)

    Fisler, Marie; Lecointre, Guillaume


    The aim of this study is to explore whether matrices and MP trees used to produce systematic categories of organisms could be useful to produce categories of ideas in history of science. We study the history of the use of trees in systematics to represent the diversity of life from 1766 to 1991. We apply to those ideas a method inspired from coding homologous parts of organisms. We discretize conceptual parts of ideas, writings and drawings about trees contained in 41 main writings; we detect shared parts among authors and code them into a 91-characters matrix and use a tree representation to show who shares what with whom. In other words, we propose a hierarchical representation of the shared ideas about trees among authors: this produces a "tree of trees." Then, we categorize schools of tree-representations. Classical schools like "cladists" and "pheneticists" are recovered but others are not: "gradists" are separated into two blocks, one of them being called here "grade theoreticians." We propose new interesting categories like the "buffonian school," the "metaphoricians," and those using "strictly genealogical classifications." We consider that networks are not useful to represent shared ideas at the present step of the study. A cladogram is made for showing who is sharing what with whom, but also heterobathmy and homoplasy of characters. The present cladogram is not modelling processes of transmission of ideas about trees, and here it is mostly used to test for proximity of ideas of the same age and for categorization.

  11. Large old trees influence patterns of delta13C and delta15N in forests. (United States)

    Weber, Pascale; Bol, Roland; Dixon, Liz; Bardgett, Richard D


    Large old trees are the dominant primary producers of native pine forest, but their influence on spatial patterns of soil properties and potential feedback to tree regeneration in their neighbourhood is poorly understood. We measured stable isotopes of carbon (delta(13)C) and nitrogen (delta(15)N) in soil and litter taken from three zones of influence (inner, middle and outer zone) around the trunk of freestanding old Scots pine (Pinus sylvestris L.) trees, to determine the trees' influence on below-ground properties. We also measured delta(15)N and delta(13)C in wood cores extracted from the old trees and from regenerating trees growing within their three zones of influence. We found a significant and positive gradient in soil delta(15)N from the inner zone, nearest to the tree centre, to the outer zone beyond the tree crown. This was probably caused by the higher input of (15)N-depleted litter below the tree crown. In contrast, the soil delta(13)C did not change along the gradient of tree influence. Distance-related trends, although weak, were visible in the wood delta(15)N and delta(13)C of regenerating trees. Moreover, the wood delta(15)N of small trees showed a weak negative relationship with soil N content in the relevant zone of influence. Our results indicate that large old trees control below-ground conditions in their immediate surroundings, and that stable isotopes might act as markers for the spatial and temporal extent of these below-ground effects. John Wiley & Sons, Ltd

  12. Urban tree growth modeling (United States)

    E. Gregory McPherson; Paula J. Peper


    This paper describes three long-term tree growth studies conducted to evaluate tree performance because repeated measurements of the same trees produce critical data for growth model calibration and validation. Several empirical and process-based approaches to modeling tree growth are reviewed. Modeling is more advanced in the fields of forestry and...

  13. Keeping trees as assets (United States)

    Kevin T. Smith


    Landscape trees have real value and contribute to making livable communities. Making the most of that value requires providing trees with the proper care and attention. As potentially large and long-lived organisms, trees benefit from commitment to regular care that respects the natural tree system. This system captures, transforms, and uses energy to survive, grow,...

  14. Retention of seed trees fails to lifeboat ectomycorrhizal fungal diversity in harvested Scots pine forests. (United States)

    Varenius, Kerstin; Lindahl, Björn D; Dahlberg, Anders


    Fennoscandian forestry has in the past decades changed from natural regeneration of forests towards replantation of clear-cuts, which negatively impacts ectomycorrhizal fungal (EMF) diversity. Retention of trees during harvesting enables EMF survival, and we therefore expected EMF communities to be more similar to those in old natural stands after forest regeneration using seed trees compared to full clear-cutting and replanting. We sequenced fungal internal transcribed spacer 2 (ITS2) amplicons to assess EMF communities in 10- to 60-year-old Scots pine stands regenerated either using seed trees or through replanting of clear-cuts with old natural stands as reference. We also investigated local EMF communities around retained old trees. We found that retention of seed trees failed to mitigate the impact of harvesting on EMF community composition and diversity. With increasing stand age, EMF communities became increasingly similar to those in old natural stands and permanently retained trees maintained EMF locally. From our observations, we conclude that EMF communities, at least common species, post-harvest are more influenced by environmental filtering, resulting from environmental changes induced by harvest, than by the continuity of trees. These results suggest that retention of intact forest patches is a more efficient way to conserve EMF diversity than retaining dispersed single trees. © FEMS 2017. All rights reserved. For permissions, please e-mail:

  15. The effect of hypergravity on the lens, cornea and tail regeneration in Urodela (United States)

    Grigoryan, E. N.; Dvorochkin, N.; Poplinskaya, V. A.; Yousuf, R.; Radugina, E. A.; Almeida, E. A.


    release by the neural retina and FGFR2 expression in the iris and other tissues could accelerate lens proliferation whereas its delay could be caused by retinal detachment, which may explain compromised regeneration at 2 g. Hypergravity (both 1 g and 2 g) increased tissue growth compared to aquarium control (as measured by regenerate volume) and altered the shape of tail regenerates - they became curved downwards. The experimental results emphasize the important and versatile role gravity plays in tissue regeneration. They also suggest that, when considering hypergravity as a countermeasure that can be used in future space missions, its potential impact on the eye should not be ignored.

  16. Classification and regression trees

    CERN Document Server

    Breiman, Leo; Olshen, Richard A; Stone, Charles J


    The methodology used to construct tree structured rules is the focus of this monograph. Unlike many other statistical procedures, which moved from pencil and paper to calculators, this text's use of trees was unthinkable before computers. Both the practical and theoretical sides have been developed in the authors' study of tree methods. Classification and Regression Trees reflects these two sides, covering the use of trees as a data analysis method, and in a more mathematical framework, proving some of their fundamental properties.

  17. [Guided bone regeneration: general survey]. (United States)

    Cosyn, Jan; De Bruyn, Hugo


    The principle of 'guided bone regeneration' was first described in 1988 on the basis of animal-experimental data. Six weeks after transmandibular defects had been created and protected by non-resorbable teflonmembranes, complete bone regeneration was found. The technique was based on the selective repopulation of the wound: every infiltration of cells outside the neighbouring bone tissue was prevented by the application of the membrane. Additional animal experiments showed that guided bone regeneration was a viable treatment option for local bone defects surrounding dental implants. Clinical practice, however, showed that premature membrane exposure was a common complication, which was responsible for a tremendous reduction in regenerated bone volume. In addition, a second surgical intervention was always necessary to remove the membrane. As a result, resorbable alternatives were developed. Since these are less rigid, bone fillers are usually used simultaneously. These comprise autogenous bone chips and bone substitutes from allogenic or xenogenic origine. Also alloplastic materials could be used for this purpose. Based on their characteristics this article provides an overview of the biomaterials that could be considered for guided bone regeneration. Specific attention goes to their application in clinical practice.

  18. The interactive effects of surface-burn severity and canopy cover on conifer and broadleaf tree seedling ecophysiology (United States)

    Sheel Bansal; Till Jochum; David A. Wardle; Marie-Charlotte Nilsson


    Fire has an important role for regeneration of many boreal forest tree species, and this includes both wildfire and prescribed burning following clear-cutting. Depending on the severity, fire can have a variety of effects on above- and belowground properties that impact tree seedling establishment. Very little is known about the impacts of ground fire severity on post-...

  19. Stand development and yields of Appalachian hardwood stands managed with single-tree selection for at least 30 years (United States)

    Neil I Lamson; H. Clay Smith; H. Clay Smith


    Appalachian hardwood stands in West Virginia were managed for 30 or more years using single-tree selection regeneration practices. Stand yield data suggest that current stand growth will provide economical harvest cuts for several future cutting cycles. This case study indicates that the single-tree selection practice has potential for landowners who want to maintain...

  20. Climatic, landform, microtopographic, and overstory canopy controls of tree invasion in a subalpine meadow landscape, Oregon Cascades, USA (United States)

    Harold S.J. Zald; Thomas A. Spies; Manuela Huso; Demetrios. Gatziolis


    Tree invasions have been documented throughout Northern Hemisphere high elevation meadows, as well as globally in many grass and forb-dominated ecosystems. Tree invasions are often associated with large-scale changes in climate or disturbance regimes, but are fundamentally driven by regeneration processes influenced by interactions between climatic, topographic, and...

  1. Reconstructing 3D Tree Models Using Motion Capture and Particle Flow

    Directory of Open Access Journals (Sweden)

    Jie Long


    Full Text Available Recovering tree shape from motion capture data is a first step toward efficient and accurate animation of trees in wind using motion capture data. Existing algorithms for generating models of tree branching structures for image synthesis in computer graphics are not adapted to the unique data set provided by motion capture. We present a method for tree shape reconstruction using particle flow on input data obtained from a passive optical motion capture system. Initial branch tip positions are estimated from averaged and smoothed motion capture data. Branch tips, as particles, are also generated within a bounding space defined by a stack of bounding boxes or a convex hull. The particle flow, starting at branch tips within the bounding volume under forces, creates tree branches. The forces are composed of gravity, internal force, and external force. The resulting shapes are realistic and similar to the original tree crown shape. Several tunable parameters provide control over branch shape and arrangement.

  2. Building Resistance and Resilience: Regeneration Should Not be Left to Chance

    Directory of Open Access Journals (Sweden)

    James N. Long


    Full Text Available Contemporary forest planning has tasked managers with developing goals associated with resistance and resilience. In practice, silviculturists use forest structure and tree species composition to characterize goals and desired future conditions, write prescriptions, and monitor outcomes associated with resistance and resilience. Although rarely discussed in the exploding literature relating to forest resistance and resilience, silvicultural regeneration methods are important and underutilized tools to meet these goals. We propose alternative silvicultural systems for building resistance and resilience to two common large-scale bark beetle disturbance agents in the Intermountain West, United States: mountain pine beetle (Dendroctonus ponderosae Hopkins and spruce beetle (Dendroctonus rufipennis Kirby. Shelterwood, and shelterwood-with-reserves, silvicultural systems provide the desirable facilitative characteristics of a mature overstory on maintaining advance reproduction and the establishment of new cohorts of desirable tree species. These also allow the timely regeneration of large treatment areas necessary to rapidly promote desired future conditions in the face of inevitable disturbance. When implemented proactively, regeneration treatments allow silviculturists to take advantage of currently existing vegetation for the creation of age class and tree species diversity. In general, these examples illustrate the need for proactive planning for regeneration in response to any disturbance where desired future conditions include particular species. Furthermore, we argue that timely silvicultural interventions that focus on regenerating trees may be a key factor in achieving goals relating to resilience to specific disturbance types. Waiting until after the disturbance has occurred could result in the lost opportunity to establish desired species composition or stand structure—and may well result in a considerable restoration challenge.

  3. Behavior of the turbine - regenerating preheaters functional assembly

    International Nuclear Information System (INIS)

    Bigu, Melania; Nita, Iulian Pavel; Tenescu, Mircea


    In the classical calculation of pressure distribution in the turbine-regenerating heaters' assembly a uniform distribution of feedwater enthalpy rise at each regenerating preheating step is usually assumed. This is accurately enough as a basis of designing of the preheating installation operating at rated power regime. But at partial regimes this is not totally valid since the preheaters are already shaped and the quasi-equal distribution does not satisfy the equation system describing the heat transfer correlations in these installations. A more detailed analysis shows that pressure in the feeding line preheaters and the bleeding steam flow rates at the turbine outlets are described physically by solving simultaneously the equations of hydrodynamic flow through the turbine and the equations of the heat transfer in the preheaters of the feedwater preheating line. This work approaches this more accurate solving method at least from a theoretical standing point; two cases are illustrated in the annexes of the work: a case of a secondary circuit with a single regenerating inlet and a case with two regenerating inlets. A classical - Panzer method of transformation of a many regenerative stages scheme may lead to one or another of the above cases. (authors)

  4. Microwave regeneration of molecular sieves

    International Nuclear Information System (INIS)

    Singh, V.P.


    Molecular sieve driers have been included in the design of tritium handling systems for fusion reactors. In these systems there is a need to maintain extremely low exit dew points from the driers as well as a capability to rapidly reduce tritium concentrations following an accident. The required capacity of the driers is very high. The conventional method of regenerating these sieves after a water adsorption cycle is with hot air. However, because water is rapidly heated by microwave energy, this technology may be suitable for decreasing the bed regeneration time and hence may allow reduced capital and operating costs associated with a smaller bed. The present study was conducted to obtain preliminary information on the technical feasibility of regenerating molecular sieves with microwave energy. The study concentrated on Type 4A molecular sieve with a few tests on Type 13X sieve and also a silica gel adsorbent

  5. Regenerator cross arm seal assembly (United States)

    Jackman, Anthony V.


    A seal assembly for disposition between a cross arm on a gas turbine engine block and a regenerator disc, the seal assembly including a platform coextensive with the cross arm, a seal and wear layer sealingly and slidingly engaging the regenerator disc, a porous and compliant support layer between the platform and the seal and wear layer porous enough to permit flow of cooling air therethrough and compliant to accommodate relative thermal growth and distortion, a dike between the seal and wear layer and the platform for preventing cross flow through the support layer between engine exhaust and pressurized air passages, and air diversion passages for directing unregenerated pressurized air through the support layer to cool the seal and wear layer and then back into the flow of regenerated pressurized air.

  6. Remnant trees affect species composition but not structure of tropical second-growth forest. (United States)

    Sandor, Manette E; Chazdon, Robin L


    Remnant trees, spared from cutting when tropical forests are cleared for agriculture or grazing, act as nuclei of forest regeneration following field abandonment. Previous studies on remnant trees were primarily conducted in active pasture or old fields abandoned in the previous 2-3 years, and focused on structure and species richness of regenerating forest, but not species composition. Our study is among the first to investigate the effects of remnant trees on neighborhood forest structure, biodiversity, and species composition 20 years post-abandonment. We compared the woody vegetation around individual remnant trees to nearby plots without remnant trees in the same second-growth forests ("control plots"). Forest structure beneath remnant trees did not differ significantly from control plots. Species richness and species diversity were significantly higher around remnant trees. The species composition around remnant trees differed significantly from control plots and more closely resembled the species composition of nearby old-growth forest. The proportion of old-growth specialists and generalists around remnant trees was significantly greater than in control plots. Although previous studies show that remnant trees may initially accelerate secondary forest growth, we found no evidence that they locally affect stem density, basal area, and seedling density at later stages of regrowth. Remnant trees do, however, have a clear effect on the species diversity, composition, and ecological groups of the surrounding woody vegetation, even after 20 years of forest regeneration. To accelerate the return of diversity and old-growth forest species into regrowing forest on abandoned land, landowners should be encouraged to retain remnant trees in agricultural or pastoral fields.

  7. A perfect storm: multiple stressors interact to drive postfire regeneration failure of lodgepole pine and Douglas-fir forests in Yellowstone (United States)

    Hansen, W. D.; Braziunas, K. H.; Rammer, W.; Seidl, R.; Turner, M. G.


    Twenty-first century forests will experience increased stress as environmental conditions and disturbance regimes change. Whether forests retain their structure or transitions to alternate states, particularly when affected by multiple stressors, remains unresolved. Subalpine forests in Yellowstone National Park, WY experience large severe wildfires, and postfire-tree regeneration is necessary to assure resilience. Drying is projected, causing frequent larger wildfires that could reduce seed supply and drought that could constrain postfire-seedling establishment. We asked what combinations of warming-drying conditions, increased fire frequency, and increased burned-patch size cause postfire tree-regeneration failure in Yellowstone? We conducted a simulation experiment to identify combinations of fire frequency, fire size, postfire climate, substrate type, and elevation where lodgepole-pine and Douglas-fir regeneration failed. We expected postfire densities to be reduced if burned-patch sizes exceeded effective dispersal distance, sequential fires burned before trees reached reproductive maturity, or drought occurred after fire. We also expected regeneration failure only where multiple stressors occurred simultaneously at low elevation or on poor substrates.Douglas-fir stands were most vulnerable to regeneration failure. 98% of simulated Douglas-fir stands located in the middle of large burned patches failed to regenerate 30 years post fire. Lodgepole-pine stands in the middle of large burned patches failed to regenerate if they were also located at low elevations (93%) or at higher elevations on soils with poor water retention (73%). Stands of serotinous lodgepole (i.e., trees with closed cones that open when heated) also failed to regenerate if fire recurred before trees were reproductively mature (82%). Drought constrained postfire regeneration, yet, enhanced establishment due to release from cold-temperatures during mid-to-late 21st century often outweighed

  8. Species composition, elevation, and former management type affect browsing pressure on forest regeneration in the Tatra National Park

    Directory of Open Access Journals (Sweden)

    Bodziarczyk Jan


    Full Text Available Effects of ungulate pressure on the development of young generation of trees is one of the most important issues in ecology and forestry. Ungulate pressure influence on the development of natural regeneration has been also reported from several national parks. Our study on the effects of ungulate browsing on the young generation of trees was conducted on more than 500 sample plots controlled during one growing season.

  9. Fault tree handbook

    International Nuclear Information System (INIS)

    Haasl, D.F.; Roberts, N.H.; Vesely, W.E.; Goldberg, F.F.


    This handbook describes a methodology for reliability analysis of complex systems such as those which comprise the engineered safety features of nuclear power generating stations. After an initial overview of the available system analysis approaches, the handbook focuses on a description of the deductive method known as fault tree analysis. The following aspects of fault tree analysis are covered: basic concepts for fault tree analysis; basic elements of a fault tree; fault tree construction; probability, statistics, and Boolean algebra for the fault tree analyst; qualitative and quantitative fault tree evaluation techniques; and computer codes for fault tree evaluation. Also discussed are several example problems illustrating the basic concepts of fault tree construction and evaluation

  10. "We Was Regenerated Out": Regeneration, Recycling and Devaluing Communities

    Directory of Open Access Journals (Sweden)

    Luna Glucksberg


    Full Text Available This article looks at well documented processes of urban regeneration and community displacement in the inner-city through an innovative anthropological perspective focused on concepts of waste and value. Using the notion of symbolic devaluation of the working classes developed by Skeggs (1997; 2004, it traces their exclusion from recycling practices while at the same time the estates they live on are being regenerated. Raising questions about the parallels and contradictions between regeneration and recycling, it shows how symbolic devaluation of specifi c areas and their inhabitants are necessary precursors of the physical demolition and removal that characterize regeneration processes. Through an ethnographic approach, the deep connections between people and their waste, and people as waste, are exposed and questioned, showing how valuable middle class selves are produced through appropriate waste management procedures, i.e. individualized recycling, while inner-city, estate dwellers are remade into uncaring, unworthy citizens who cannot take part in this value-producing circuit.

  11. There's Life in Hazard Trees (United States)

    Mary Torsello; Toni McLellan

    The goals of hazard tree management programs are to maximize public safety and maintain a healthy sustainable tree resource. Although hazard tree management frequently targets removal of trees or parts of trees that attract wildlife, it can take into account a diversity of tree values. With just a little extra planning, hazard tree management can be highly beneficial...

  12. Plant Regeneration and Genetic Transformation in Eggplant ...

    African Journals Online (AJOL)

    Dr Harmander Gill


    Feb 5, 2014 ... Review. Plant regeneration in eggplant (Solanum melongena L.): A review ... and development of somatic hybrids, efficient plant regeneration ... was first reported in eggplant from immature seed embryos .... Hormone free MS.

  13. Skeletal muscle regeneration is modulated by inflammation

    Directory of Open Access Journals (Sweden)

    Wenjun Yang


    Full Text Available Skeletal muscle regeneration is a complex process orchestrated by multiple steps. Recent findings indicate that inflammatory responses could play central roles in bridging initial muscle injury responses and timely muscle injury reparation. The various types of immune cells and cytokines have crucial roles in muscle regeneration process. In this review, we briefly summarise the functions of acute inflammation in muscle regeneration. The translational potential of this article: Immune system is closely relevant to the muscle regeneration. Understanding the mechanisms of inflammation in muscle regeneration is therefore critical for the development of effective regenerative, and therapeutic strategies in muscular disorders. This review provides information for muscle regeneration research regarding the effects of inflammation on muscle regeneration. Keywords: Chronic muscle disorders, Cytokines, Immune cells, Inflammation, Muscle regeneration, Muscle stem cells

  14. Covering tree with stars

    DEFF Research Database (Denmark)

    Baumbach, Jan; Guo, Jiong; Ibragimov, Rashid


    We study the tree edit distance problem with edge deletions and edge insertions as edit operations. We reformulate a special case of this problem as Covering Tree with Stars (CTS): given a tree T and a set of stars, can we connect the stars in by adding edges between them such that the resulting...... tree is isomorphic to T? We prove that in the general setting, CST is NP-complete, which implies that the tree edit distance considered here is also NP-hard, even when both input trees having diameters bounded by 10. We also show that, when the number of distinct stars is bounded by a constant k, CTS...

  15. In vitro regeneration of Salix nigra from adventitious shoots. (United States)

    Lyyra, Satu; Lima, Amparo; Merkle, Scott A


    Black willow (Salix nigra Marsh.) is the largest and only commercially important willow species in North America. It is a candidate for phytoremediation of polluted soils because it is fast-growing and thrives on floodplains throughout eastern USA. Our objective was to develop a protocol for the in vitro regeneration of black willow plants that could serve as target material for gene transformation. Unexpanded inflorescence explants were excised from dormant buds collected from three source trees and cultured on woody plant medium (WPM) supplemented with one of: (1) 0.1 mg l(-1) thidiazuron (TDZ); (2) 0.5 mg l(-1) 6-benzoaminopurine (BAP); or (3) 1 mg l(-1) BAP. All plant growth regulator (PGR) treatments induced direct adventitious bud formation from the genotypes. The percentage of explants producing buds ranged from 20 to 92%, depending on genotype and treatment. Although most of the TDZ-treated inflorescences produced buds, these buds failed to elongate into shoots. Buds on explants treated with BAP elongated into shoots that were easily rooted in vitro and further established in potting mix in high humidity. The PGR treatments significantly affected shoot regeneration frequency (P < 0.01). The highest shoot regeneration frequency (36%) was achieved with Genotype 3 cultured on 0.5 mg l(-1) BAP. Mean number of shoots per explant varied from one to five. The ability of black willow inflorescences to produce adventitious shoots makes them potential targets for Agrobacterium-mediated transformation with heavy-metal-resistant genes for phytoremediation.

  16. Community assessment of tropical tree biomass

    DEFF Research Database (Denmark)

    Theilade, Ida; Rutishauser, Ervan; Poulsen, Michael K.


    Background REDD+ programs rely on accurate forest carbon monitoring. Several REDD+ projects have recently shown that local communities can monitor above ground biomass as well as external professionals, but at lower costs. However, the precision and accuracy of carbon monitoring conducted by local...... communities have rarely been assessed in the tropics. The aim of this study was to investigate different sources of error in tree biomass measurements conducted by community monitors and determine the effect on biomass estimates. Furthermore, we explored the potential of local ecological knowledge to assess...... measurement, with special attention given to large and odd-shaped trees. A better understanding of traditional classification systems and concepts is required for local tree identifications and wood density estimates to become useful in monitoring of biomass and tree diversity....

  17. QPSK regeneration without active phase-locking

    DEFF Research Database (Denmark)

    Kjøller, Niels-Kristian; Da Ros, Francesco; Røge, Kasper Meldgaard


    QPSK regeneration without active phase stabilization is investigated in numerical simulations. We propose an improved scheme for phase-locking free QPSK regeneration showing significant improvements in the error vector magnitude of the signal.......QPSK regeneration without active phase stabilization is investigated in numerical simulations. We propose an improved scheme for phase-locking free QPSK regeneration showing significant improvements in the error vector magnitude of the signal....


    Directory of Open Access Journals (Sweden)

    Sergio Miguel Godínez


    Full Text Available Coniferous forests of the western highlands of Guatemala have been disturbed by human intervention and natural phenomena, which has allowed the occurrence of the phenomenon of natural regeneration. In this scenario the density of natural regeneration of conifers three species evaluated (Pinus oocarpa Schiede, P. pseudostrobus Lindl. and P. tecunumanii Eguiluz & Perry in 60 sites distributed in space and clear edge. The variables evaluated were the source of disturbance that caused its establishment, density variation of the source of seed and distance estimation range scattering adequate regeneration, using sampling units of 25 m2 for natural regeneration and 500 m2 seed source trees. Disturbance sources identified were logging 55%, 24% forest fires, pests 8%, agriculture, avalanche 5% each and hurricane 3%. The variation of the density of natural regeneration on the seed source, corresponds to the inverted J models for edges, and to clear variable subpopulations. Dispersal distances of natural regeneration was established for P.oocarpa 65 m in edges, and 160 m in the clears; P. pseudostrobus 75 m in edges, and 175 m in the clears; and P. tecunumanii was 70 m in edges, and 170 m in the clears. Dispersal distances with acceptable densities according National Forestry Institute-Regional Forestry Programme for Central American, for the three species vary from 65-175 m

  19. Regeneration of Abies cephalonica Loudon after a Large Fire in Central Greece

    Directory of Open Access Journals (Sweden)

    Yannis Raftoyannis


    Full Text Available Background and Purpose: Abies cephalonica Loudon (Greek fir is a dominant tree species of the mountainous Greece that forms productive forests. Wildfires in fir forests were not considered a major threat but in recent decades, fir ecosystems in Greece have experienced large crown fires with subsequent ecological and economical losses. Materials and Methods: This study was designed to aid our understanding of Greek fir recovery after fire. In Central Greece, 12 years after a large fire, fir regeneration and site factors were studied in 143 sampling plots located in 10 transects. Results: Fir regeneration density decreased abruptly with distance from the remnant stands and followed the negative exponential curve with decreasing regeneration abundance from the border of the unburned zone. Abiotic factors such as elevation, aspect, slope steepness and ground cover type could not significantly explain any variability in fir regeneration density. Conclusions: Our results showed that distance from a seed source was the most important variable in explaining fir regeneration. Moreover, the density of fir regeneration seemed adequate to provide stocking for a future fir forest.

  20. Guide to Regeneration of Bottomland Hardwoods (United States)

    Martha R. McKevlin


    This guide will help landowners, consulting foresters, and public service foresters regenerate bottomland hardwoods. It discusses (1) interpretation of site characteristics, (2) selection of species, and (3) selection of regeneration methods. A dichotomous key for selection of appropriate regeneration methods under various conditions is presented.

  1. All optical regeneration using semiconductor devices

    DEFF Research Database (Denmark)

    Mørk, Jesper; Öhman, Filip; Tromborg, Bjarne

    All-optical regeneration is a key functionality for implementing all-optical networks. We present a simple theory for the bit-error-rate in links employing all-optical regenerators, which elucidates the interplay between the noise and and nonlinearity of the regenerator. A novel device structure ...... is analyzed, emphasizing general aspects of active semiconductor waveguides....

  2. Semiconductor devices for all-optical regeneration

    DEFF Research Database (Denmark)

    Öhman, Filip; Bischoff, Svend; Tromborg, Bjarne


    We review different implementations of semiconductor devices for all-optical regeneration. A general model will be presented for all-optical regeneration in fiber links, taking into consideration the trade-off between non-linearity and noise. Furthermore we discuss a novel regenerator type, based...

  3. The blastema and epimorphic regeneration in mammals. (United States)

    Seifert, Ashley W; Muneoka, Ken


    Studying regeneration in animals where and when it occurs is inherently interesting and a challenging research topic within developmental biology. Historically, vertebrate regeneration has been investigated in animals that display enhanced regenerative abilities and we have learned much from studying organ regeneration in amphibians and fish. From an applied perspective, while regeneration biologists will undoubtedly continue to study poikilothermic animals (i.e., amphibians and fish), studies focused on homeotherms (i.e., mammals and birds) are also necessary to advance regeneration biology. Emerging mammalian models of epimorphic regeneration are poised to help link regenerative biology and regenerative medicine. The regenerating rodent digit tip, which parallels human fingertip regeneration, and the regeneration of large circular defects through the ear pinna in spiny mice and rabbits, provide tractable, experimental systems where complex tissue structures are regrown through blastema formation and morphogenesis. Using these models as examples, we detail similarities and differences between the mammalian blastema and its classical counterpart to arrive at a broad working definition of a vertebrate regeneration blastema. This comparison leads us to conclude that regenerative failure is not related to the availability of regeneration-competent progenitor cells, but is most likely a function of the cellular response to the microenvironment that forms following traumatic injury. Recent studies demonstrating that targeted modification of this microenvironment can restrict or enhance regenerative capabilities in mammals helps provide a roadmap for eventually pushing the limits of human regeneration. Copyright © 2017 Elsevier Inc. All rights reserved.


    Directory of Open Access Journals (Sweden)

    D. I. Gnir


    Full Text Available The experimental activation of the sand regenerator of the firm SINTO is carried out at ОАО “MZOO". It is shown that sand grains are cleared from films of binding agents, that allows to use the treated sand for preparation of agglutinant and core sands.

  5. Comparative Analysis of Cartilage Marker Gene Expression Patterns during Axolotl and Xenopus Limb Regeneration.

    Directory of Open Access Journals (Sweden)

    Kazumasa Mitogawa

    Full Text Available Axolotls (Ambystoma mexicanum can completely regenerate lost limbs, whereas Xenopus laevis frogs cannot. During limb regeneration, a blastema is first formed at the amputation plane. It is thought that this regeneration blastema forms a limb by mechanisms similar to those of a developing embryonic limb bud. Furthermore, Xenopus laevis frogs can form a blastema after amputation; however, the blastema results in a terminal cone-shaped cartilaginous structure called a "spike." The causes of this patterning defect in Xenopus frog limb regeneration were explored. We hypothesized that differences in chondrogenesis may underlie the patterning defect. Thus, we focused on chondrogenesis. Chondrogenesis marker genes, type I and type II collagen, were compared in regenerative and nonregenerative environments. There were marked differences between axolotls and Xenopus in the expression pattern of these chondrogenesis-associated genes. The relative deficit in the chondrogenic capacity of Xenopus blastema cells may account for the absence of total limb regenerative capacity.

  6. Tree-rings mirror management legacy: dramatic response of standard oaks to past coppicing in Central Europe.

    Directory of Open Access Journals (Sweden)

    Jan Altman

    Full Text Available BACKGROUND: Coppicing was one of the most important forest management systems in Europe documented in prehistory as well as in the Middle Ages. However, coppicing was gradually abandoned by the mid-20(th century, which has altered the ecosystem structure, diversity and function of coppice woods. METHODOLOGY/PRINCIPAL FINDINGS: Our aim was to disentangle factors shaping the historical growth dynamics of oak standards (i.e. mature trees growing through several coppice cycles in a former coppice-with-standards in Central Europe. Specifically, we tried to detect historical coppicing events from tree-rings of oak standards, to link coppicing events with the recruitment of mature oaks, and to determine the effects of neighbouring trees on the stem increment of oak standards. Large peaks in radial growth found for the periods 1895-1899 and 1935-1939 matched with historical records of coppice harvests. After coppicing, the number of newly recruited oak standards markedly grew in comparison with the preceding or following periods. The last significant recruitment of oak standards was after the 1930s following the last regular coppicing event. The diameter increment of oak standards from 1953 to 2003 was negatively correlated with competition indices, suggesting that neighbouring trees (mainly resprouting coppiced Tilia platyphyllos partly suppressed the growth of oak standards. Our results showed that improved light conditions following historical coppicing events caused significant increase in pulses of radial growth and most probably maintained oak recruitment. CONCLUSIONS/SIGNIFICANCE: Our historical perspective carries important implications for oak management in Central Europe and elsewhere. Relatively intense cutting creating open canopy woodlands, either as in the coppicing system or in the form of selective cutting, is needed to achieve significant radial growth in mature oaks. It is also critical for the successful regeneration and long

  7. Periodontal regeneration around natural teeth. (United States)

    Garrett, S


    1. Evidence is conclusive (Table 2) that periodontal regeneration in humans is possible following the use of bone grafts, guided tissue regeneration procedures, both without and in combination with bone grafts, and root demineralization procedures. 2. Clinically guided tissue regeneration procedures have demonstrated significant positive clinical change beyond that achieved with debridement alone in treating mandibular and maxillary (buccal only) Class II furcations. Similar data exist for intraosseous defects. Evidence suggests that the use of bone grafts or GTR procedures produce equal clinical benefit in treating intraosseous defects. Further research is necessary to evaluate GTR procedures compared to, or combined with, bone grafts in treating intraosseous defects. 3. Although there are some data suggesting hopeful results in Class II furcations, the clinical advantage of procedures combining present regenerative techniques remains to be demonstrated. Additional randomized controlled trials with sufficient power are needed to demonstrate the potential usefulness of these techniques. 4. Outcomes following regenerative attempts remain somewhat variable with differences in results between studies and individual subjects. Some of this variability is likely patient related in terms of compliance with plaque control and maintenance procedures, as well as personal habits; e.g., smoking. Variations in the defects selected for study may also affect predictability of outcomes along with other factors. 5. There is evidence to suggest that present regenerative techniques lead to significant amounts of regeneration at localized sites on specific teeth. However, if complete regeneration is to become a reality, additional stimuli to enhance the regenerative process are likely needed. Perhaps this will be accomplished in the future, with combined procedures that include appropriate polypeptide growth factors or tissue factors to provide additional stimulus.

  8. Trees and highway safety. (United States)


    To minimize the severity of run-off-road collisions of vehicles with trees, departments of transportation (DOTs) : commonly establish clear zones for trees and other fixed objects. Caltrans clear zone on freeways is 30 feet : minimum (40 feet pref...

  9. Whole meniscus regeneration using polymer scaffolds loaded with fibrochondrocytes

    Directory of Open Access Journals (Sweden)

    LU Hua-ding


    Full Text Available 【Abstract】Objective: To study the feasibility of regenerating a whole menisci using poly- (3-hydroxybutyrate-co-3-hydroxyvalerate (PHBV scaffolds loaded with meniscal cells in rabbits undergoing total meniscectomy, and to explore its protective effect on cartilage degeneration. Methods: A solvent casting and particulate leaching technique was employed to fabricate biodegradable PHBV scaffolds into a meniscal shape. The proliferated meniscal cells were seeded onto the polymer scaffolds, transplanted into rabbit knee joints whose lateral menisci had been removed. Eight to 18 weeks after transplantation, the regenerated neomenisci were evaluated by gross and histological observations. Cartilage degeneration was assessed by Mankin score. Results: Eighteen weeks after transplantation, the implants formed neomenisci. Hematoxylin and eosin (HE staining of the neomenisci sections revealed regeneration of fibrocartilage. Type I collagen in the neomenisci was also proved similar to normal meniscal tissue by immunohistochemical analysis and Sirius scarlet trinitrophenol staining. Articular cartilage degeneration was observed 8 weeks after implantation. It was less severe as compared with that in total meniscectomy controls and no further degeneration was observed at 18 weeks. At that time, the regenerated neomenisci strongly resembled normal meniscal fibrocartilage in gross and histological appearance, and its mechani- cal property was also close to that of normal meniscus. Conclusions: The present study demonstrates the feasibility of tissue-engineering a whole meniscal structure in total meniscectomy rabbit models using biodegradable PHBV scaffolds together with cultured allogeneic meniscal cells. Cartilage degeneration is decreased. But long-term in vivo investigations on the histological structure and cartilage degeneration of the neomenisci regenerated by this method are still necessary to determine the clinical potential of this tissue

  10. The balance of planting and mortality in a street tree population (United States)

    Lara A. Roman; John J. Battles; Joe R. McBride


    Street trees have aesthetic, environmental, human health, and economic benefits in urban ecosystems. Street tree populations are constructed by cycles of planting, growth, death, removal and replacement. The goals of this study were to understand how tree mortality and planting rates affect net population growth, evaluate the shape of the mortality curve, and assess...

  11. An improved tree height measurement technique tested on mature southern pines (United States)

    Don C. Bragg


    Virtually all techniques for tree height determination follow one of two principles: similar triangles or the tangent method. Most people apply the latter approach, which uses the tangents of the angles to the top and bottom and a true horizontal distance to the subject tree. However, few adjust this method for ground slope, tree lean, crown shape, and crown...

  12. Decision-Tree Program (United States)

    Buntine, Wray


    IND computer program introduces Bayesian and Markov/maximum-likelihood (MML) methods and more-sophisticated methods of searching in growing trees. Produces more-accurate class-probability estimates important in applications like diagnosis. Provides range of features and styles with convenience for casual user, fine-tuning for advanced user or for those interested in research. Consists of four basic kinds of routines: data-manipulation, tree-generation, tree-testing, and tree-display. Written in C language.

  13. The influence of cattle grazing and grass seeding on coniferous regeneration after shelterwood cutting in eastern Oregon. (United States)

    K.W. Seidel; J. Michael Geist; Gerald S. Strickler


    Natural regeneration was abundant, regardless of grazing and grass seeding treatments,after shelterwood cutting to three overstory densities (27, 73, and 119 square feet of basal area per acre) in mixed conifer stands in the Starkey Experimental Forest and Range in eastern Oregon. After 6 years, the number of tree seedlings ranged from about 3,800 per acre on the low-...

  14. Small-mammal responses to pine regeneration treatments in the Ouachita Mountains of Arkansas and Oklahoma, USA (United States)

    Roger W. Perry; Ronald E. Thill


    We compared the initial effects of four forest regeneration treatments (single-tree selection, group selection, shelterwood, and clearcut), and unharvested controls (mature, second-growth forest) on relative abundance of small mammals and small-mammal habitat throughout the Ouachita Mountains of western Arkansas and eastern Oklahoma. We compared small-mammal capture...

  15. Minnesota's Forest Trees. Revised. (United States)

    Miles, William R.; Fuller, Bruce L.

    This bulletin describes 46 of the more common trees found in Minnesota's forests and windbreaks. The bulletin contains two tree keys, a summer key and a winter key, to help the reader identify these trees. Besides the two keys, the bulletin includes an introduction, instructions for key use, illustrations of leaf characteristics and twig…

  16. D2-tree

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Sioutas, Spyros; Pantazos, Kostas


    We present a new overlay, called the Deterministic Decentralized tree (D2-tree). The D2-tree compares favorably to other overlays for the following reasons: (a) it provides matching and better complexities, which are deterministic for the supported operations; (b) the management of nodes (peers...

  17. Covering tree with stars

    DEFF Research Database (Denmark)

    Baumbach, Jan; Guo, Jian-Ying; Ibragimov, Rashid


    We study the tree edit distance problem with edge deletions and edge insertions as edit operations. We reformulate a special case of this problem as Covering Tree with Stars (CTS): given a tree T and a set of stars, can we connect the stars in by adding edges between them such that the resulting ...

  18. Winter Birch Trees (United States)

    Sweeney, Debra; Rounds, Judy


    Trees are great inspiration for artists. Many art teachers find themselves inspired and maybe somewhat obsessed with the natural beauty and elegance of the lofty tree, and how it changes through the seasons. One such tree that grows in several regions and always looks magnificent, regardless of the time of year, is the birch. In this article, the…

  19. Total well dominated trees

    DEFF Research Database (Denmark)

    Finbow, Arthur; Frendrup, Allan; Vestergaard, Preben D.

    cardinality then G is a total well dominated graph. In this paper we study composition and decomposition of total well dominated trees. By a reversible process we prove that any total well dominated tree can both be reduced to and constructed from a family of three small trees....

  20. Optical Regeneration and Noise in Semiconductor Devices

    DEFF Research Database (Denmark)

    Öhman, Filip


    In this report all-optical 2R-regeneration in optical communication systems is investigated. A simple regenerator device based on concatenated semiconductor optical amplifiers (SOAs) and electro absorbers (EAs) is introduced and examined. Experiments show that the monolithic SOA-EA 2R-regenerator......In this report all-optical 2R-regeneration in optical communication systems is investigated. A simple regenerator device based on concatenated semiconductor optical amplifiers (SOAs) and electro absorbers (EAs) is introduced and examined. Experiments show that the monolithic SOA-EA 2R...

  1. TreePics: visualizing trees with pictures

    Directory of Open Access Journals (Sweden)

    Nicolas Puillandre


    Full Text Available While many programs are available to edit phylogenetic trees, associating pictures with branch tips in an efficient and automatic way is not an available option. Here, we present TreePics, a standalone software that uses a web browser to visualize phylogenetic trees in Newick format and that associates pictures (typically, pictures of the voucher specimens to the tip of each branch. Pictures are visualized as thumbnails and can be enlarged by a mouse rollover. Further, several pictures can be selected and displayed in a separate window for visual comparison. TreePics works either online or in a full standalone version, where it can display trees with several thousands of pictures (depending on the memory available. We argue that TreePics can be particularly useful in a preliminary stage of research, such as to quickly detect conflicts between a DNA-based phylogenetic tree and morphological variation, that may be due to contamination that needs to be removed prior to final analyses, or the presence of species complexes.

  2. Nerves Regulate Cardiomyocyte Proliferation and Heart Regeneration. (United States)

    Mahmoud, Ahmed I; O'Meara, Caitlin C; Gemberling, Matthew; Zhao, Long; Bryant, Donald M; Zheng, Ruimao; Gannon, Joseph B; Cai, Lei; Choi, Wen-Yee; Egnaczyk, Gregory F; Burns, Caroline E; Burns, C Geoffrey; MacRae, Calum A; Poss, Kenneth D; Lee, Richard T


    Some organisms, such as adult zebrafish and newborn mice, have the capacity to regenerate heart tissue following injury. Unraveling the mechanisms of heart regeneration is fundamental to understanding why regeneration fails in adult humans. Numerous studies have revealed that nerves are crucial for organ regeneration, thus we aimed to determine whether nerves guide heart regeneration. Here, we show using transgenic zebrafish that inhibition of cardiac innervation leads to reduction of myocyte proliferation following injury. Specifically, pharmacological inhibition of cholinergic nerve function reduces cardiomyocyte proliferation in the injured hearts of both zebrafish and neonatal mice. Direct mechanical denervation impairs heart regeneration in neonatal mice, which was rescued by the administration of neuregulin 1 (NRG1) and nerve growth factor (NGF) recombinant proteins. Transcriptional analysis of mechanically denervated hearts revealed a blunted inflammatory and immune response following injury. These findings demonstrate that nerve function is required for both zebrafish and mouse heart regeneration. Copyright © 2015 Elsevier Inc. All rights reserved.

  3. The pace and shape of ageing

    DEFF Research Database (Denmark)

    Baudisch, Annette


    exhibits negligible ageing - contrary to the commonly held view that long-lived species are good candidates for negligible ageing. 5.Analysis of species in pace-shape space provides a tool to identify key determinants of the evolution of ageing for species across the tree of life....

  4. Tree Line Structure and Dynamics at the Northern Limit of the Larch Forest: Anabar Plateau, Siberia, Russia (United States)

    Kharuk, Viacheslav I.; Ranson, Kenneth J.; Im, Sergey T.; Oskorbin, Pavel A.; Dvinskaya, Maria L.; Ovchinnikov, Dmitriy V.


    The goal of the study was to provide an analysis of climate impact before, during, and after the Little Ice Age (LIA) on the larch (Larix gmelinii) tree line at the northern extreme of Siberian forests. Recent decadal climate change impacts on the tree line, regeneration abundance, and age structure were analyzed. The location of the study area was within the forest-tundra ecotone (elevation range 170-450 m) in the Anabar Plateau, northern Siberia. Field studies were conducted along elevational transects. Tree natality/mortality and radial increment were determined based on dendrochronology analyses. Tree morphology, number of living and subfossil trees, regeneration abundance, and age structure were studied. Locations of pre-LIA, LIA, and post-LIA tree lines and refugia boundaries were established. Long-term climate variables and drought index were included in the analysis. It was found that tree mortality from the 16th century through the beginning of the 19th century caused a downward tree line recession. Sparse larch stands experienced deforestation, transforming into tundra with isolated relict trees. The maximum tree mortality and radial growth decrease were observed to have occurred at the beginning of 18th century. Now larch, at its northern boundary in Siberia, is migrating into tundra areas. Upward tree migration was induced by warming in the middle of the 19th century. Refugia played an important role in repopulation of the forest-tundra ecotone by providing a seed source and shelter for recruitment of larch regeneration. Currently this ecotone is being repopulated mainly by tree cohorts that were established after the 1930s. The last two decades of warming did not result in an acceleration of regeneration recruitment because of increased drought conditions. The regeneration line reached (but did not exceed) the pre-LIA tree line location, although contemporary tree heights and stand densities are comparatively lower than in the pre-LIA period. The mean

  5. Declines in populations of Salix caprea L.during forest regeneration after strong herbivore pressure

    Directory of Open Access Journals (Sweden)

    Janusz B. Faliński


    Full Text Available Communities of broadleaved forest subject to strong pressure from large herbivores underwent degeneration. The relief of this pressure led to regeneration of the community, in which an important role was played by the sallow Salix caprea and other light-seeded pioneer species of tree (Populus tremula, Betula pendula and B. pubescens. Regeneration involving Salix caprea proceeded following the conservatorial protection of the degenerate stands in a reserve and later in Białowieża National Park. The emergence and development of the population of Salix caprea proceeded following the invasion of spruce, which coincided with the period of enhanced animal pressure on broadleaved forest. Salix caprea filled all the gaps in the tree stand arising as a result of the destruction of trees and undergrowth by herbivores (in the years 1892-1915. It also appeared en masse on old, at that time unforested, clearings and felled areas. In these places, Salix caprea created very abundant populations, with particular trees being in good condition, with a habit typical of forest trees and attaining considerable heights. The majority of trees were 50-60 years old at the time of death, although individuals reached 74 years of age. The process of extinction of the sallow population - observed over 19 years on permanent plots and fixed trees - proceeded very quickly, especially in the first decade of observation. It led to the almost complete disappearance of sallow for the forest communities of Białowieża National Park. The death of individual trees is preceded by impairment of their health and reduced annual increments in the 4-9 last years of life. The extinction of the population is associated with the loss of its primary phenological differentiation and with a change in the sex structure of the population from a prevalence of female trees to a near even distribution of the two sexes. The development of the populations of permanent constituents of the forest

  6. Spectra of chemical trees

    International Nuclear Information System (INIS)

    Balasubramanian, K.


    A method is developed for obtaining the spectra of trees of NMR and chemical interests. The characteristic polynomials of branched trees can be obtained in terms of the characteristic polynomials of unbranched trees and branches by pruning the tree at the joints. The unbranched trees can also be broken down further until a tree containing just two vertices is obtained. The effectively reduces the order of the secular determinant of the tree used at the beginning to determinants of orders atmost equal to the number of vertices in the branch containing the largest number of vertices. An illustrative example of a NMR graph is given for which the 22 x 22 secular determinant is reduced to determinants of orders atmost 4 x 4 in just the second step of the algorithm. The tree pruning algorithm can be applied even to trees with no symmetry elements and such a factoring can be achieved. Methods developed here can be elegantly used to find if two trees are cospectral and to construct cospectral trees

  7. Refining discordant gene trees. (United States)

    Górecki, Pawel; Eulenstein, Oliver


    Evolutionary studies are complicated by discordance between gene trees and the species tree in which they evolved. Dealing with discordant trees often relies on comparison costs between gene and species trees, including the well-established Robinson-Foulds, gene duplication, and deep coalescence costs. While these costs have provided credible results for binary rooted gene trees, corresponding cost definitions for non-binary unrooted gene trees, which are frequently occurring in practice, are challenged by biological realism. We propose a natural extension of the well-established costs for comparing unrooted and non-binary gene trees with rooted binary species trees using a binary refinement model. For the duplication cost we describe an efficient algorithm that is based on a linear time reduction and also computes an optimal rooted binary refinement of the given gene tree. Finally, we show that similar reductions lead to solutions for computing the deep coalescence and the Robinson-Foulds costs. Our binary refinement of Robinson-Foulds, gene duplication, and deep coalescence costs for unrooted and non-binary gene trees together with the linear time reductions provided here for computing these costs significantly extends the range of trees that can be incorporated into approaches dealing with discordance.

  8. Natural regeneration in abandoned fields following intensive agricultural land use in an Atlantic Forest Island, Brazil

    Directory of Open Access Journals (Sweden)

    Milene Silvestrini


    Full Text Available The time required to regrowth a forest in degraded areas depends on how the forest is removed and on the type of land use following removal. Natural regeneration was studied in abandoned old fields after intensive agricultural land use in areas originally covered by Brazilian Atlantic Forests of the Anchieta Island, Brazil in order to understand how plant communities reassemble following human disturbances as well as to determine suitable strategies of forest restoration. The fields were classified into three vegetation types according to the dominant plant species in: 1 Miconia albicans (Sw. Triana (Melastomataceae fields, 2 Dicranopteris flexuosa (Schrader Underw. (Gleicheniaceae thickets, and 3 Gleichenella pectinata (Willd. Ching. (Gleicheniaceae thickets. Both composition and structure of natural regeneration were compared among the three dominant vegetation types by establishing randomly three plots of 1 x 3 m in five sites of the island. A gradient in composition and abundance of species in natural regeneration could be observed along vegetation types from Dicranopteris fern thickets to Miconia fields. The gradient did not accurately follow the pattern of spatial distribution of the three dominant vegetation types in the island regarding their proximity of the remnant forests. A complex association of biotic and abiotic factors seems to be affecting the seedling recruitment and establishment in the study plots. The lowest plant regeneration found in Dicranopteris and Gleichenella thickets suggests that the ferns inhibit the recruitment of woody and herbaceous species. Otherwise, we could not distinguish different patterns of tree regeneration among the three vegetation types. Our results showed that forest recovery following severe anthropogenic disturbances is not direct, predictable or even achievable on its own. Appropriated actions and methods such as fern removal, planting ground covers, and enrichment planting with tree species were

  9. Understory vegetation in fast-growing tree plantations on savanna soils in Congo


    Loumeto, J.J.; Huttel, Charles


    The hypothesis that tree plantations may catalyze the regeneration of natural forest biodiversity was tested through studies of floristic diversity and structure in fast-growing tree plantations in the Congo. Study sites included experimental and industrial plantations on poor sandy coastal soils near Pointe-Noire, and experimental plantations on clay soils near Loudima. The effects of plantations species, plantation age (in 6- to 20-year-old eucalypt stands), disturbance due to herbicide use...

  10. Canopy seed banks as time capsules of biodiversity in pasture-remnant tree crowns. (United States)

    Nadkarni, Nalini M; Haber, Willam A


    Tropical pastures present multiple barriers to tree regeneration and restoration. Relict trees serve as "regeneration foci" because they ameliorate the soil microclimate and serve as safe spots for dispersers. Here, we describe another mechanism by which remnant trees may facilitate pasture regeneration: the presence of seed banks in the canopy soil that accumulates from decomposing epiphytes within the crowns of mature remnant trees in tropical cloud forest pastures. We compared seed banks of canopy soils (histosols derived from fallen leaves, fruits, flower, and twigs of host trees and epiphytes, dead bryophytes, bark, detritus, dead animals, and microorganisms, and dust that accumulate on trunks and the upper surfaces of large branches) in pastures, canopy soils in primary forest trees, and soil on the forest floor in Monteverde, Costa Rica. There were 5211 epiphytic and terrestrial plant seeds in the three habitats. All habitats were dominated by seeds in a relatively small number of plant families, most of which were primarily woody, animal pollinated, and animal dispersed. The density of seeds on the forest floor was greater than seed density in either pasture-canopy or forest-canopy soils; the latter two did not differ. Eight species in 44 families and 61 genera from all of the habitats were tallied. There were 37 species in the pasture-canopy soil, 33 in the forest-canopy soil, and 57 on the forest floor. Eleven species were common to all habitats. The mean species richness in the pasture canopy was significantly higher than the forest canopy (F =83.38; p banks of pasture trees can function as time capsules by providing propagules that are removed in both space and time from the primary forest. Their presence may enhance the ability of pastures to regenerate more quickly, reinforcing the importance of trees in agricultural settings.

  11. Beech forests of Azerbaijan: The modern condition, age structure and regeneration

    Directory of Open Access Journals (Sweden)

    Z.M. Hasanov


    Full Text Available Azerbaijan is a country with low forest cover, only 11.8% of the territory is covered with forests. All forests perform important water-soil-protection functions. In forests, naturally grow 107 species of trees and 328 shrubs species. Despite the fact that there are many species in dendroflora, only 10 tree species have economic value for the forest sector of the country. Beech (31.68%, oak (27.40% and hornbeam (26.01% are growing in 85.09% of forested areas. Beech forests are spread on 327 thousand hectares from 989,5 of total forest lands of he Republic. Beech forests are a source of high-quality wood and beech nuts. All beech forests grow in mountains at heights of 600–800 and 1600–1800 m above the sea level and performing important ecological functions. Until recently there were no problems with natural renewal of the beech forests, but now the regeneration of beech forests is alarming. In recent years, the productivity and density of beech forests decreased substantially, the natural regeneration proceeds unsatisfactorily and, consequently, reduction of beech forests takes place. We have researched 33,8 thousand hectares of beech forests of the Lesser Caucasus, their natural regeneration and made analysis of age structure of forests. Keywords: Fagus orientalis, Beech forests, Silviculture, Natural regeneration, Age class

  12. Natural Regeneration in a Multi-Layered Pinus sylvestris-Picea abies Forest after Target Diameter Harvest and Soil Scarification

    Directory of Open Access Journals (Sweden)

    Lars Drössler


    Full Text Available Forest management in Sweden can be characterized by even-aged silviculture heavily relying on three established harvest regimes: clearcutting, the seed-tree method, and the shelterwood system. Less intense, small-scale retention harvest systems such as single tree and group selection harvest are rarely used. In addition, natural regeneration dynamics without enrichment planting have barely been studied. Consequently, this study examined natural regeneration establishment in a multi-layered Pinus sylvestris-Picea abies forest stand in southwest Sweden after target diameter harvesting and soil scarification. The creation of forest canopy gaps had a positive effect on total seedling density five years after harvest, mainly due to a significantly higher number of Betula pendula individuals. Seedling density of more desirable tree species suitable for continuous cover forestry such as Fagus sylvatica, Quercus petraea and Picea abies also increased substantially in gaps when compared to pre-harvest conditions or the unharvested plots. In contrast, soil scarification did not increase the number of seedlings of desired tree species due to a significant decrease in Picea abies abundance. Soil moisture and gap size significantly improved Betula pendula seedling establishment while a larger number of Quercus petraea seedlings were observed in Vaccinium myrtillus patches. We conclude that canopy gaps are beneficial under the encountered stand conditions to initiate forest regeneration, and that soil scarification without the timely occurrence of a mast year of desired tree species is not effective in the type of forest studied.

  13. MHD (Magnetohydrodynamics) recovery and regeneration

    Energy Technology Data Exchange (ETDEWEB)

    McIlroy, R. A. [Babcock and Wilcox Co., Alliance, OH (United States). Research Center; Probert, P. B. [Babcock and Wilcox Co., Alliance, OH (United States). Research Center; Lahoda, E. J. [Westinghouse Electric Corp., Pittsburgh, PA (United States); Swift, W. M. [Argonne National Lab. (ANL), Argonne, IL (United States); Jackson, D. M. [Univ. of Tennessee Space Inst. (UTSI), Tullahoma, TN (United States); Prasad, J. [Univ. of Tennessee Space Inst. (UTSI), Tullahoma, TN (United States); Martin, J. [Hudson Engineering (United States); Rogers, C. [Hudson Engineering (United States); Ho, K. K. [Babcock and Wilcox Co., Alliance, OH (United States). Research Center; Senary, M. K. [Babcock and Wilcox Co., Alliance, OH (United States). Research Center; Lee, S. [Univ. of Akron, OH (United States)


    A two-phase program investigating MHD seed regeneration is described. In Phase I, bench scale experiments were carried out to demonstrate the technical feasibility of a proposed Seed Regeneration Process. The Phase I data has been used for the preliminary design of a Proof-of-Concept (POC) plant which will be built and tested in Phase II. The Phase I data will also be used to estimate the costs of a 300 Mw(t) demonstration plant for comparison with other processes. The Seed Regeneration Process consists of two major subprocesses; a Westinghouse Dry Reduction process and a modified Tampella (sulfur) Recovery process. The Westinghouse process reduces the recovered spent seed (i.e., potassium sulfate) to potassium polysulfide in a rotary kiln. The reduction product is dissolved in water to form green liquor, clarified to remove residual coal ash, and sent to the Tampella sulfur release system. The sulfur is released using carbon dioxide from flue gas in a two stage reaction. The sulfur is converted to elemental sulfur as a marketable by product. The potassium is crystallized from the green liquor and dried to the anhydrous form for return to the MHD unit.


    Directory of Open Access Journals (Sweden)

    Juliana Matos Figueiredo


    Full Text Available Herb recovery was evaluated in degraded Caatinga sites protected from grazing and enriched with native trees, in Patos-PB state, Brazil . Treatments were randomized according to a block design with five treatments (no tree planting –T 0 – or tree planting of three tree species in pure –T 1 = Poincianella pyramidalis , T 2 = Mimosa tenuiflora and T 3 = Cnidoscolus quercifolius – or mixed balanced stands –T 4 and five replications of squared-144-m 2 plots with 36 seedlings developing in planting holes enriched with manure and chemical fertilizers, arranged in a 2 m x 2 m grid. Data were collected from September 2008 to October 2009. After this period, natural tree regeneration was still not observed, and tree canopy covered 15 to 49% of the soil and did not affect herb growth and species composition. Initial and final herb cover were 16% and 100%, respectively. The number of dicot herbs increased from five, mainly two Sida species, to 13 species, monocots were represented by one species only (Aristida sp ., and quantity of herb forage reached 3 ton/ha (2:1, dicot:monocot. Adjacent overgrazed plots kept the initial low level of herb cover and species composition. Animal deferment during one year allowed the increase in soil cover and plant diversity in degraded Caatinga sites into which planted tree seedlings established successfully. This management practice could be implemented to avoid further environmental degradation and recover degraded areas.

  15. Cell migration during heart regeneration in zebrafish. (United States)

    Tahara, Naoyuki; Brush, Michael; Kawakami, Yasuhiko


    Zebrafish possess the remarkable ability to regenerate injured hearts as adults, which contrasts the very limited ability in mammals. Although very limited, mammalian hearts do in fact have measurable levels of cardiomyocyte regeneration. Therefore, elucidating mechanisms of zebrafish heart regeneration would provide information of naturally occurring regeneration to potentially apply to mammalian studies, in addition to addressing this biologically interesting phenomenon in itself. Studies over the past 13 years have identified processes and mechanisms of heart regeneration in zebrafish. After heart injury, pre-existing cardiomyocytes dedifferentiate, enter the cell cycle, and repair the injured myocardium. This process requires interaction with epicardial cells, endocardial cells, and vascular endothelial cells. Epicardial cells envelope the heart, while endocardial cells make up the inner lining of the heart. They provide paracrine signals to cardiomyocytes to regenerate the injured myocardium, which is vascularized during heart regeneration. In addition, accumulating results suggest that local migration of these major cardiac cell types have roles in heart regeneration. In this review, we summarize the characteristics of various heart injury methods used in the research community and regeneration of the major cardiac cell types. Then, we discuss local migration of these cardiac cell types and immune cells during heart regeneration. Developmental Dynamics 245:774-787, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  16. Vegetation structure and composition of a tropical dry forest in regeneration in Bataclán (Cali, Colombia

    Directory of Open Access Journals (Sweden)

    Viviana Londoño Lemos


    Full Text Available Characterization of long-term vegetation in a tropical dry forest (TDF that is in the process of regeneration permits establishment of patterns of composition, structure and dynamics of plant communities and sheds light on the different stages of plant succession. In this study, the plant community of ecoparque Bataclán, Cali, Colombia was evaluated by determining its structure and composition in two regeneration strategies. One strategy consisted of natural regeneration with bamboo barriers and the other of natural regeneration without bamboo barriers. Three permanent plots of 500 m2 were established in each regeneration strategy (six plots in total. Composition and structure was determined, taking into account all the growth habits, with different sampling methods. We found no significant differences between vegetation structure and composition of the two strategies for forest regeneration. forty-one species belonging to 27 families were recorded (trees and shrubs 58.5 %, herbs 24.4 %, climbers or scandents 14.6 %, epiphytes 2.4 %. The dominant family was Melastomataceae and the dominant species was Miconia prasina. The orchidCatasetum ochraceum and the grass Thrasya petrosa were indicator species for high luminosity. We conclude that the plant community is in an early successional stage, where there is a mixture of planted and naturally regenerated species in the zone, characterized by pioneer species from TDF and other nearby life zones.

  17. Brick castles of Panemune regional park: Aspects of regeneration

    Directory of Open Access Journals (Sweden)

    Inga Genytė


    Full Text Available The regeneration of brick castles of Panemunė Regional Park in Lithuania was influenced by the political, economic, and social environment. The motives of their regeneration was the function of state border defence, installation of fortifications for the occupation of new lands, function of defence of the state internal and transit trade routes, function of the protection of noblemen’s property, and the function of strengthening of the territorial control. Two characteristic castle development tendencies were revealed: one witnessed further development under local construction traditions, while another reflected the examples of the European construction. The architecture of castles was shaped by the military tactics, development of military technique, local terrain, the wellbeing of the castle owners, their hierarchical role and demands, construction traditions, and the development of construction technology. The architectural forms varied from dungeon to palace. The changing social demands encouraged the choice of new solutions for castle regeneration in order to increase the comfort level conditions and cost-effectiveness of the premises.

  18. Linear shaped charge

    Energy Technology Data Exchange (ETDEWEB)

    Peterson, David; Stofleth, Jerome H.; Saul, Venner W.


    Linear shaped charges are described herein. In a general embodiment, the linear shaped charge has an explosive with an elongated arrowhead-shaped profile. The linear shaped charge also has and an elongated v-shaped liner that is inset into a recess of the explosive. Another linear shaped charge includes an explosive that is shaped as a star-shaped prism. Liners are inset into crevices of the explosive, where the explosive acts as a tamper.

  19. Three-dimensional printing for craniomaxillofacial regeneration. (United States)

    Gaviria, Laura; Pearson, Joseph J; Montelongo, Sergio A; Guda, Teja; Ong, Joo L


    Craniomaxillofacial injuries produce complex wound environments involving various tissue types and treatment strategies. In a clinical setting, care is taken to properly irrigate and stabilize the injury, while grafts are molded in an attempt to maintain physiological functionality and cosmesis. This often requires multiple surgeries and grafts leading to added discomfort, pain and financial burden. Many of these injuries can lead to disfigurement and resultant loss of system function including mastication, respiration, and articulation, and these can lead to acute and long-term psychological impact on the patient. A main causality of these issues is the lack of an ability to spatially control pre-injury morphology while maintaining shape and function. With the advent of additive manufacturing (three-dimensional printing) and its use in conjunction with biomaterial regenerative strategies and stem cell research, there is an increased potential capacity to alleviate such limitations. This review focuses on the current capabilities of additive manufacturing platforms, completed research and potential for future uses in the treatment of craniomaxillofacial injuries, with an in-depth discussion of regeneration of the periodontal complex and teeth.

  20. Canopy treatment influences growth of replacement tree species in Fraxinus nigra forests threatened by the emerald ash borer in Minnesota, USA (United States)

    Christopher E. Looney; Anthony W. D' Amato; Brian J. Palik; Robert A. Slesak


    Fraxinus nigra Marsh. (black ash), a dominant tree species of wetland forests in northern Minnesota, USA, is imperiled by the invasive insect emerald ash borer (EAB; Agrilus planipennis Fairmaire, 1888). Regeneration of associated tree species is generally low in F. nigra forests and could be impacted...

  1. [Natural regeneration of young Excentrodendron hsienmu in karst mountainous region in Southwest Guangxi, China]. (United States)

    Ou, Zhi-Yang; Su, Zhi-Yao; Peng, Yu-Hua; Hu, Qin-Fei; Huang, Xiao-Rong


    A field survey was conducted in the karst mountainous region in Pingguo County of Southwest Guangxi, China to explore the structural characteristics, spatial distribution pattern, and growth dynamics of young Excentrodendron hsienmu as well as the main environmental factors affecting the natural regeneration of the E. hsienmu population. In the study area, the population structure of the young E. hsienmu was stable, and exhibited a clumped spatial pattern for the seedlings and seedling sprouts. The ground diameter growth and height growth of the young E. hsienmu presented the same variation trend, i. e., the ground diameter increased with increasing height. The ground diameter growth and height growth of the E. hsienmu seedlings were limited by population density, i. e., decreased with increasing population density. The correlation analysis showed that the trees more than 2.5 m in height and the shrubs were the major stand factors affecting the natural regeneration of young E. hsienmu, while the herbs had no significant correlation with the regeneration. The percentage of covered rock also had no significant effects on the regeneration. Kruskal-Wallis ANOVA showed that there existed significant differences in the height and ground diameter of young E. hsienmu at different slope degrees and slope positions. The population density, height, and ground diameter had significant differences across slope aspects. The natural regeneration of young E. hsienmu was comprehensively affected by the species biological characteristics, intraspecific competition, interspecific competition, heterogeneous habitat, and anthropogenic disturbances.

  2. Dendrite Injury Triggers DLK-Independent Regeneration

    Directory of Open Access Journals (Sweden)

    Michelle C. Stone


    Full Text Available Axon injury triggers regeneration through activation of a conserved kinase cascade, which includes the dual leucine zipper kinase (DLK. Although dendrites are damaged during stroke, traumatic brain injury, and seizure, it is not known whether mature neurons monitor dendrite injury and initiate regeneration. We probed the response to dendrite damage using model Drosophila neurons. Two larval neuron types regrew dendrites in distinct ways after all dendrites were removed. Dendrite regeneration was also triggered by injury in adults. Next, we tested whether dendrite injury was initiated with the same machinery as axon injury. Surprisingly, DLK, JNK, and fos were dispensable for dendrite regeneration. Moreover, this MAP kinase pathway was not activated by injury to dendrites. Thus, neurons respond to dendrite damage and initiate regeneration without using the conserved DLK cascade that triggers axon regeneration.

  3. The valuative tree

    CERN Document Server

    Favre, Charles


    This volume is devoted to a beautiful object, called the valuative tree and designed as a powerful tool for the study of singularities in two complex dimensions. Its intricate yet manageable structure can be analyzed by both algebraic and geometric means. Many types of singularities, including those of curves, ideals, and plurisubharmonic functions, can be encoded in terms of positive measures on the valuative tree. The construction of these measures uses a natural tree Laplace operator of independent interest.

  4. Alsophila weidenbrueckii (Cyatheaceae), a new scaly tree fern from Papua New Guinea

    NARCIS (Netherlands)

    Lehnert, M.


    The scaly tree fern Alsophila weidenbrueckii is described and illustrated as new to science. It occurs in the Bismarck range in north-eastern New Guinea at 1200–2100 m in evergreen wet mountain forest. The species reaches maturity at a comparatively old age and large size and regenerates only in

  5. In vitro clonal propagation of the neem tree ( Azadirachta indica A ...

    African Journals Online (AJOL)

    In vitro clonal propagation of the neem tree (Azadirachta indica A. Juss.) M Shahin-uz-zaman, M Ashrafuzzaman, MS Haque, LN Luna. Abstract. A study was conducted with root and shoot tip explants of neem to develop an efficient protocol of regeneration. Shoot tips and root tips from 10 - 20 days old seedlings of neem ...

  6. A biologically-based individual tree model for managing the longleaf pine ecosystem (United States)

    Rick Smith; Greg Somers


    Duration: 1995-present Objective: Develop a longleaf pine dynamics model and simulation system to define desirable ecosystem management practices in existing and future longleaf pine stands. Methods: Naturally-regenerated longleaf pine trees are being destructively sampled to measure their recent growth and dynamics. Soils and climate data will be combined with the...

  7. Tree planters` notes, Volume 46, Number 2, Spring 1995. Quarterly report

    Energy Technology Data Exchange (ETDEWEB)

    Nisley, R.


    ;Contents: Certified Seed and Artificial Forest Regeneration; Missoula Technology and Development Center`s 1995 Nursery and Reforestation Programs; Trees Grow Better With Water; Botrytis cinerea Carried by Adult Fungus Gnats (Diptera: Sciaridae) in Container Nurseries; Oak Seedling Root and Shoot Growth on Restored Topsoil; Improved Vegetative Propagation of Scouler Willow; Estimating Poller Yield From Western White Pine: Preliminary Studies.

  8. Coded Splitting Tree Protocols

    DEFF Research Database (Denmark)

    Sørensen, Jesper Hemming; Stefanovic, Cedomir; Popovski, Petar


    This paper presents a novel approach to multiple access control called coded splitting tree protocol. The approach builds on the known tree splitting protocols, code structure and successive interference cancellation (SIC). Several instances of the tree splitting protocol are initiated, each...... instance is terminated prematurely and subsequently iterated. The combined set of leaves from all the tree instances can then be viewed as a graph code, which is decodable using belief propagation. The main design problem is determining the order of splitting, which enables successful decoding as early...

  9. Morocco - Fruit Tree Productivity (United States)

    Millennium Challenge Corporation — Date Tree Irrigation Project: The specific objectives of this evaluation are threefold: - Performance evaluation of project activities, like the mid-term evaluation,...

  10. Irradiation inhibits the regeneration of aneurogenic limbs

    International Nuclear Information System (INIS)

    Wallace, H.; Maden, M.


    The developing arms of axolotl larvae from the 2-digit stage onward and the aneurogenic arms of surgically denervated larvae maintained in parabiosis are able to regenerate after amputation. Such regeneration is uniformly inhibited by local irradiation of the arm, whether innervated or not. This demonstration refutes a recent hypothesis that x-rays interfere with a special activity of nerves required for regeneration, and supports the earlier concept that x-rays act directly on those cells which must proliferate to form the regenerated tissues

  11. Early regulation of axolotl limb regeneration. (United States)

    Makanae, Aki; Satoh, Akira


    Amphibian limb regeneration has been studied for a long time. In amphibian limb regeneration, an undifferentiated blastema is formed around the region damaged by amputation. The induction process of blastema formation has remained largely unknown because it is difficult to study the induction of limb regeneration. The recently developed accessory limb model (ALM) allows the investigation of limb induction and reveals early events of amphibian limb regeneration. The interaction between nerves and wound epidermis/epithelium is an important aspect of limb regeneration. During early limb regeneration, neurotrophic factors act on wound epithelium, leading to development of a functional epidermis/epithelium called the apical epithelial cap (AEC). AEC and nerves create a specific environment that inhibits wound healing and induces regeneration through blastema formation. It is suggested that FGF-signaling and MMP activities participate in creating a regenerative environment. To understand why urodele amphibians can create such a regenerative environment and humans cannot, it is necessary to identify the similarities and differences between regenerative and nonregenerative animals. Here we focus on ALM to consider limb regeneration from a new perspective and we also reported that focal adhesion kinase (FAK)-Src signaling controlled fibroblasts migration in axolotl limb regeneration. Copyright © 2012 Wiley Periodicals, Inc.

  12. Angiogenesis is inhibitory for mammalian digit regeneration (United States)

    Yu, Ling; Yan, Mingquan; Simkin, Jennifer; Ketcham, Paulina D.; Leininger, Eric; Han, Manjong


    Abstract The regenerating mouse digit tip is a unique model for investigating blastema formation and epimorphic regeneration in mammals. The blastema is characteristically avascular and we previously reported that blastema expression of a known anti‐angiogenic factor gene, Pedf, correlated with a successful regenerative response (Yu, L., Han, M., Yan, M., Lee, E. C., Lee, J. & Muneoka, K. (2010). BMP signaling induces digit regeneration in neonatal mice. Development, 137, 551–559). Here we show that during regeneration Vegfa transcripts are not detected in the blastema but are expressed at the onset of differentiation. Treating the amputation wound with vascular endothelial growth factor enhances angiogenesis but inhibits regeneration. We next tested bone morphogenetic protein 9 (BMP9), another known mediator of angiogenesis, and found that BMP9 is also a potent inhibitor of digit tip regeneration. BMP9 induces Vegfa expression in the digit stump suggesting that regenerative failure is mediated by enhanced angiogenesis. Finally, we show that BMP9 inhibition of regeneration is completely rescued by treatment with pigment epithelium‐derived factor. These studies show that precocious angiogenesis is inhibitory for regeneration, and provide compelling evidence that the regulation of angiogenesis is a critical factor in designing therapies aimed at stimulating mammalian regeneration. PMID:27499862

  13. The K tree score: quantification of differences in the relative branch length and topology of phylogenetic trees. (United States)

    Soria-Carrasco, Víctor; Talavera, Gerard; Igea, Javier; Castresana, Jose


    We introduce a new phylogenetic comparison method that measures overall differences in the relative branch length and topology of two phylogenetic trees. To do this, the algorithm first scales one of the trees to have a global divergence as similar as possible to the other tree. Then, the branch length distance, which takes differences in topology and branch lengths into account, is applied to the two trees. We thus obtain the minimum branch length distance or K tree score. Two trees with very different relative branch lengths get a high K score whereas two trees that follow a similar among-lineage rate variation get a low score, regardless of the overall rates in both trees. There are several applications of the K tree score, two of which are explained here in more detail. First, this score allows the evaluation of the performance of phylogenetic algorithms, not only with respect to their topological accuracy, but also with respect to the reproduction of a given branch length variation. In a second example, we show how the K score allows the selection of orthologous genes by choosing those that better follow the overall shape of a given reference tree.

  14. Towards Regeneration of Articular Cartilage (United States)

    Iwamoto, Masahiro; Ohta, Yoichi; Larmour, Colleen; Enomoto-Iwamoto, Motomi


    Articular cartilage is classified into permanent hyaline cartilage and has significant differences in structure, extracelluar matrix components, gene expression profile, and mechanical property from transient hyaline cartilage found in growth plate. In the process of synovial joint development, articular cartilage is originated from the interzone, developing at the edge of the cartilaginous anlagen, it establishes zonal structure over time and supports smooth movement of the synovial joint through life. The cascade actions of key regulators such as Wnts, GDF5, Erg, and PTHLH coordinate sequential steps of articular cartilage formation. Articular chondrocytes are restrictedly controlled not to differentiate into a hypertrophic stage by autocrine and paracrine factors and extracerllular matrix microenvironment, but retain potential to undergo hypertrophy. The basal calcified zone of articular cartilage is connected with subchondral bone, but not invaded by blood vessels nor replaced by bone, which is highly contrasted with the growth plate. Articular cartilage has limited regenerative capacity, but likely possesses and potentially uses intrinsic stem cell source in the superficial layer, Ranvier’s groove, the intra-articular tissues such as synovium and fat pad, and marrow below the subchondral bone. Considering the biological views on articular cartilage, several important points are raised for regeneration of articular cartilage. We should evaluate the nature of regenerated cartilage as permanent hyaline cartilage and not just hyaline cartilage. We should study how a hypertrophic phenotype of transplanted cells can be lastingly suppressed in regenerating tissue. Further, we should develop the methods and reagents to activate recruitment of intrinsic stem/progenitor cells into the damaged site. PMID:24078496

  15. The Amount of Regenerated Heat Inside the Regenerator of a Stirling Engine

    Directory of Open Access Journals (Sweden)

    J. Škorpík


    Full Text Available The paper deals with analytical computing of the regenerated heat inside the regenerator of a Stirling engine. The total sum of the regenerated heat is constructed as a function of the crank angle in the case of Schmidt’s idealization. 

  16. Purifying and regenerating hydrocarbon oils

    Energy Technology Data Exchange (ETDEWEB)


    Hydrocarbons are freed from sulfur-containing compounds, colloidal asphaltic bodies and unstable unsaturated substances by treatment with a small amount of dilute sulfuric acid and a salt of a trivalent cation, such as ferric chloride or sulfate. Hydrocarbons specified are petroleum, crude benzol, low temperature tars, shale oil or vapor-phase cracked spirit. Motor spirit or lubricating oil distillates are refined and finally distilled. The acid reagent may be regenerated by filtering through sand or asbestos. Used lubricating oils may be treated similarly and after removal of refining agent, the oil is heated with an adsorbent and decolorizing material and then filtered.

  17. Bone regeneration and stem cells (United States)

    Arvidson, K; Abdallah, B M; Applegate, L A; Baldini, N; Cenni, E; Gomez-Barrena, E; Granchi, D; Kassem, M; Konttinen, Y T; Mustafa, K; Pioletti, D P; Sillat, T; Finne-Wistrand, A


    Abstract This invited review covers research areas of central importance for orthopaedic and maxillofacial bone tissue repair, including normal fracture healing and healing problems, biomaterial scaffolds for tissue engineering, mesenchymal and foetal stem cells, effects of sex steroids on mesenchymal stem cells, use of platelet-rich plasma for tissue repair, osteogenesis and its molecular markers. A variety of cells in addition to stem cells, as well as advances in materials science to meet specific requirements for bone and soft tissue regeneration by addition of bioactive molecules, are discussed. PMID:21129153

  18. Bone regeneration and stem cells

    DEFF Research Database (Denmark)

    Arvidson, K; Abdallah, B M; Applegate, L A


    cells, use of platelet rich plasma for tissue repair, osteogenesis and its molecular markers. A variety of cells in addition to stem cells, as well as advances in materials science to meet specific requirements for bone and soft tissue regeneration by addition of bioactive molecules, are discussed.......This invited review covers research areas of central importance for orthopedic and maxillofacial bone tissue repair, including normal fracture healing and healing problems, biomaterial scaffolds for tissue engineering, mesenchymal and fetal stem cells, effects of sex steroids on mesenchymal stem...

  19. Are trees long-lived? (United States)

    Kevin T. Smith


    Trees and tree care can capture the best of people's motivations and intentions. Trees are living memorials that help communities heal at sites of national tragedy, such as Oklahoma City and the World Trade Center. We mark the places of important historical events by the trees that grew nearby even if the original tree, such as the Charter Oak in Connecticut or...

  20. Final cutting of shelterwood. Harvesting techniques and effects on the Picea abies regeneration

    International Nuclear Information System (INIS)

    Gloede, Dan


    During the last decade, environmental and biological aspects have grown increasingly important in forestry. At the same time conventional planting after clear-cutting has failed on many sites with a high ground water table, abundant competitive vegetation and frequent frosts. Therefore, on these sites the use of the shelterwood system for regeneration of Norway spruce (Picea abies [L.] Karst.) has increased in Sweden. The main objective of the thesis is to study if it is possible to final-cut shelterwoods at acceptable harvesting costs, logging damage and release effects in the regeneration. Final cutting of three shelterwoods (180-200 m 3 /ha) in Sweden were carried out with single- and double-grip harvester systems in 1-1.5 m high regeneration (6 400-26 700 seedlings/ha). In a fourth shelterwood (140-165 m 3 /ha), also situated in Sweden, conventional felling with a single-grip harvester was compared with a more concentrated felling according to a method named 'tossing the caber', where the trees were felled top-end first over the 1.2-1.3 m high regeneration (9 530-11 780 seedlings/ha) and into the striproad. No differences in productivity and cost between single- and double-grip harvesters in final cutting of shelterwood were found. Despite few stems/ha and extensive regeneration the harvesting cost was considered low (33.5 SEK/m 3 ). Approximately one third of the seedlings suffered mortal logging damage, which was considered acceptable. No differences between conventional felling and the tossing the caber method were found regarding productivity, cost and damage to the regeneration. However, tossing the caber may be a more productive alternative in final cutting of pine-dominated shelterwood or seed tree stands. Seedling growth and survival after shelterwood removal was not influenced by the choice of harvester system. Seedling height and vitality were found to be good estimators of post-release survival and growth which, in total, was found to be acceptable


    Directory of Open Access Journals (Sweden)

    Carlos Patiño Torres


    Full Text Available Se utilizaron filtrados de cultivo de Colletotrichum acutatum, agente causal de la antracnosis del tomate de árbol, para la selección in vitro de variantes somaclonales de ésta planta con resistencia potencial a la enfermedad. El filtrado, utilizado a varias concentraciones, demostró ser un agente de selección efectivo cuando se integró al medio de cultivo, pues causó niveles elevados de mortalidad de los explantes comparado con los tratamientos sin filtrado. Igualmente, se estudió el efecto de la benziladenina (BA ó BAP sobre la respuesta organogénica de explantes de tejido foliar de tomate de árbol.Culture filtrates of Colletotrichum acutatum, causal agent of the anthracnose disease in tree tomato, were used for the in vitro selection of somaclonal variants with potential resistance to this disease. Culture filtrates used at different concentrations, showed to be an effective agent of selection when they were mixed with the growth media. The findings indicated a high level of mortality for the explants growing on the ammended media as compared with these growing on non ammended one. The effect of the benziladenina (BA ó BAP on the organogenic response of leaf explants of tomato tree was also studied.

  2. Regeneration performance of CO2-rich solvents by using membrane vacuum regeneration technology: Relationships between absorbent structure and regeneration efficiency

    International Nuclear Information System (INIS)

    Yan, Shuiping; Fang, Mengxiang; Wang, Zhen; Luo, Zhongyang


    Highlights: ► MVR may be viable to successfully use less valuable heat to replace high grade steam. ► Increasing OH and amine groups will increase the regeneration efficiency. ► Absorbents with a four carbon chain length will be more attractive to MVR. ► Amino acid salts will be more appropriate for MVR. ► HRM conducted at ambient pressure and low temperature is inferior to MVR. -- Abstract: In order to give a better understanding for the selection of suitable absorbents for the novel membrane vacuum regeneration technology (MVR) which has the potential to reduce CO 2 energy requirement by utilizing the waste heat or low-grade energy, an experimental study to determine the relationships between chemical structure and vacuum regeneration behavior of CO 2 absorbents at 70 °C and 10 kPa was performed. Eleven typical absorbents with different functional groups in their chemical structures were investigated in terms of vacuum regeneration efficiencies. Results showed that the regeneration efficiency decreased with an increase of number of activated hydrogen atom in amine group and decreased with the number of hydroxyl group. Especially, more attention should be paid to these alkanolamines with one hydrogen atom in amine group and two or more hydroxyl groups in the structures due to their better comprehensive performance in regeneration, absorbent loss and CO 2 absorption aspects. Increasing the carbon chain length and amine groups in the absorbent structure contributed to the improvement of regeneration performance and reduction of absorbent volatile loss. These absorbents with a four carbon chain length bonded at amine group might be more attractive to MVR. Furthermore, polyamines were superior to monoamines in terms of higher regeneration efficiencies and lower absorbent losses. Additionally, the individual effects of the potassium carboxylate group and hydroxymethylene group were also compared in this study. Results showed that amino acid salts were more

  3. Fragmentation of random trees

    International Nuclear Information System (INIS)

    Kalay, Z; Ben-Naim, E


    We study fragmentation of a random recursive tree into a forest by repeated removal of nodes. The initial tree consists of N nodes and it is generated by sequential addition of nodes with each new node attaching to a randomly-selected existing node. As nodes are removed from the tree, one at a time, the tree dissolves into an ensemble of separate trees, namely, a forest. We study statistical properties of trees and nodes in this heterogeneous forest, and find that the fraction of remaining nodes m characterizes the system in the limit N→∞. We obtain analytically the size density ϕ s of trees of size s. The size density has power-law tail ϕ s ∼s −α with exponent α=1+(1/m). Therefore, the tail becomes steeper as further nodes are removed, and the fragmentation process is unusual in that exponent α increases continuously with time. We also extend our analysis to the case where nodes are added as well as removed, and obtain the asymptotic size density for growing trees. (paper)

  4. The tree BVOC index (United States)

    J.R. Simpson; E.G. McPherson


    Urban trees can produce a number of benefits, among them improved air quality. Biogenic volatile organic compounds (BVOCs) emitted by some species are ozone precursors. Modifying future tree planting to favor lower-emitting species can reduce these emissions and aid air management districts in meeting federally mandated emissions reductions for these compounds. Changes...

  5. Tree growth visualization (United States)

    L. Linsen; B.J. Karis; E.G. McPherson; B. Hamann


    In computer graphics, models describing the fractal branching structure of trees typically exploit the modularity of tree structures. The models are based on local production rules, which are applied iteratively and simultaneously to create a complex branching system. The objective is to generate three-dimensional scenes of often many realistic- looking and non-...

  6. Flowering T Flowering Trees

    Indian Academy of Sciences (India)

    Adansonia digitata L. ( The Baobab Tree) of Bombacaceae is a tree with swollen trunk that attains a dia. of 10m. Leaves are digitately compound with leaflets up to 18cm. long. Flowers are large, solitary, waxy white, and open at dusk. They open in 30 seconds and are bat pollinated. Stamens are many. Fruit is about 30 cm ...

  7. Fault tree graphics

    International Nuclear Information System (INIS)

    Bass, L.; Wynholds, H.W.; Porterfield, W.R.


    Described is an operational system that enables the user, through an intelligent graphics terminal, to construct, modify, analyze, and store fault trees. With this system, complex engineering designs can be analyzed. This paper discusses the system and its capabilities. Included is a brief discussion of fault tree analysis, which represents an aspect of reliability and safety modeling

  8. Tree biology and dendrochemistry (United States)

    Kevin T. Smith; Walter C. Shortle


    Dendrochemistry, the interpretation of elemental analysis of dated tree rings, can provide a temporal record of environmental change. Using the dendrochemical record requires an understanding of tree biology. In this review, we pose four questions concerning assumptions that underlie recent dendrochemical research: 1) Does the chemical composition of the wood directly...

  9. Individual tree control (United States)

    Harvey A. Holt


    Controlling individual unwanted trees in forest stands is a readily accepted method for improving the value of future harvests. The practice is especially important in mixed hardwood forests where species differ considerably in value and within species individual trees differ in quality. Individual stem control is a mechanical or chemical weeding operation that...

  10. Trees and Climate Change


    Dettenmaier, Megan; Kuhns, Michael; Unger, Bethany; McAvoy, Darren


    This fact sheet describes the complex relationship between forests and climate change based on current research. It explains ways that trees can mitigate some of the risks associated with climate change. It details the impacts that forests are having on the changing climate and discuss specific ways that trees can be used to reduce or counter carbon emissions directly and indirectly.

  11. Structural Equation Model Trees (United States)

    Brandmaier, Andreas M.; von Oertzen, Timo; McArdle, John J.; Lindenberger, Ulman


    In the behavioral and social sciences, structural equation models (SEMs) have become widely accepted as a modeling tool for the relation between latent and observed variables. SEMs can be seen as a unification of several multivariate analysis techniques. SEM Trees combine the strengths of SEMs and the decision tree paradigm by building tree…

  12. Matching Subsequences in Trees

    DEFF Research Database (Denmark)

    Bille, Philip; Gørtz, Inge Li


    Given two rooted, labeled trees P and T the tree path subsequence problem is to determine which paths in P are subsequences of which paths in T. Here a path begins at the root and ends at a leaf. In this paper we propose this problem as a useful query primitive for XML data, and provide new...

  13. How eco-evolutionary principles can guide tree breeding and tree biotechnology for enhanced productivity. (United States)

    Franklin, Oskar; Palmroth, Sari; Näsholm, Torgny


    Tree breeding and biotechnology can enhance forest productivity and help alleviate the rising pressure on forests from climate change and human exploitation. While many physiological processes and genes are targeted in search of genetically improved tree productivity, an overarching principle to guide this search is missing. Here, we propose a method to identify the traits that can be modified to enhance productivity, based on the differences between trees shaped by natural selection and 'improved' trees with traits optimized for productivity. We developed a tractable model of plant growth and survival to explore such potential modifications under a range of environmental conditions, from non-water limited to severely drought-limited sites. We show how key traits are controlled by a trade-off between productivity and survival, and that productivity can be increased at the expense of long-term survival by reducing isohydric behavior (stomatal regulation of leaf water potential) and allocation to defense against pests compared with native trees. In contrast, at dry sites occupied by naturally drought-resistant trees, the model suggests a better strategy may be to select trees with slightly lower wood density than the native trees and to augment isohydric behavior and allocation to defense. Thus, which traits to modify, and in which direction, depend on the original tree species or genotype, the growth environment and wood-quality versus volume production preferences. In contrast to this need for customization of drought and pest resistances, consistent large gains in productivity for all genotypes can be obtained if root traits can be altered to reduce competition for water and nutrients. Our approach illustrates the potential of using eco-evolutionary theory and modeling to guide plant breeding and genetic technology in selecting target traits in the quest for higher forest productivity. © The Author 2014. Published by Oxford University Press. All rights reserved

  14. Microwave Regenerable Air Purification Device (United States)

    Atwater, James E.; Holtsnider, John T.; Wheeler, Richard R., Jr.


    The feasibility of using microwave power to thermally regenerate sorbents loaded with water vapor, CO2, and organic contaminants has been rigorously demonstrated. Sorbents challenged with air containing 0.5% CO2, 300 ppm acetone, 50 ppm trichloroethylene, and saturated with water vapor have been regenerated, singly and in combination. Microwave transmission, reflection, and phase shift has also been determined for a variety of sorbents over the frequency range between 1.3-2.7 GHz. This innovative technology offers the potential for significant energy savings in comparison to current resistive heating methods because energy is absorbed directly by the material to be heated. Conductive, convective and radiative losses are minimized. Extremely rapid heating is also possible, i.e., 1400 C in less than 60 seconds. Microwave powered thermal desorption is directly applicable to the needs of Advance Life Support in general, and of EVA in particular. Additionally, the applicability of two specific commercial applications arising from this technology have been demonstrated: the recovery for re-use of acetone (and similar solvents) from industrial waste streams using a carbon based molecular sieve; and the separation and destruction of trichloroethylene using ZSM-5 synthetic zeolite catalyst, a predominant halocarbon environmental contaminant. Based upon these results, Phase II development is strongly recommended.

  15. Liver Development, Regeneration, and Carcinogenesis

    Directory of Open Access Journals (Sweden)

    Janet W. C. Kung


    Full Text Available The identification of putative liver stem cells has brought closer the previously separate fields of liver development, regeneration, and carcinogenesis. Significant overlaps in the regulation of these processes are now being described. For example, studies in embryonic liver development have already provided the basis for directed differentiation of human embryonic stem cells and induced pluripotent stem cells into hepatocyte-like cells. As a result, the understanding of the cell biology of proliferation and differentiation in the liver has been improved. This knowledge can be used to improve the function of hepatocyte-like cells for drug testing, bioartificial livers, and transplantation. In parallel, the mechanisms regulating cancer cell biology are now clearer, providing fertile soil for novel therapeutic approaches. Recognition of the relationships between development, regeneration, and carcinogenesis, and the increasing evidence for the role of stem cells in all of these areas, has sparked fresh enthusiasm in understanding the underlying molecular mechanisms and has led to new targeted therapies for liver cirrhosis and primary liver cancers.

  16. Regeneration of Pelargonium in vitro

    Directory of Open Access Journals (Sweden)

    Agnieszka Wojtania


    Full Text Available Pelargonium sp. has been a subject of numerous studies to deterimine the effec tiveness of in vitro techniques to produce a large number of pathogen-free plants. Regeneration of pelargonium plants from the different initial explants as well via organogenesis as via somatic embryogenesis has been obtained. The most effective adventitious shoot formation has been achieved from shoot tips and axillary buds using cytokinin or cytokinin/auxin combinations. Leaf explants, whose general have lower organogenic potency, regenerate better in the presence of thidiazuron. This growth regulator stimulate the somatic embryos production from hypocotyl and cotyledone explants too. The main problem in tissue culture propagation of Pelargonium has been the high tendency to formation of vigorously growing callus with low organogenic potency and rapid senescence of cultures. Moreover, the significant differen ces in requirements to the medium composition (minerals, organic compounds and growth regulators between Pelargonium cultivars has been observed. This makes difficult to develop an universaI method of Pelargonium micropropagation.

  17. Environmental tritium in trees

    International Nuclear Information System (INIS)

    Brown, R.M.


    The distribution of environmental tritium in the free water and organically bound hydrogen of trees growing in the vicinity of the Chalk River Nuclear Laboratories (CRNL) has been studied. The regional dispersal of HTO in the atmosphere has been observed by surveying the tritium content of leaf moisture. Measurement of the distribution of organically bound tritium in the wood of tree ring sequences has given information on past concentrations of HTO taken up by trees growing in the CRNL Liquid Waste Disposal Area. For samples at background environmental levels, cellulose separation and analysis was done. The pattern of bomb tritium in precipitation of 1955-68 was observed to be preserved in the organically bound tritium of a tree ring sequence. Reactor tritium was discernible in a tree growing at a distance of 10 km from CRNL. These techniques provide convenient means of monitoring dispersal of HTO from nuclear facilities. (author)

  18. Cascading effects of a highly specialized beech-aphid–fungus interaction on forest regeneration

    Directory of Open Access Journals (Sweden)

    Susan C. Cook-Patton


    Full Text Available Specialist herbivores are thought to often enhance or maintain plant diversity within ecosystems, because they prevent their host species from becoming competitively dominant. In contrast, specialist herbivores are not generally expected to have negative impacts on non-hosts. However, we describe a cascade of indirect interactions whereby a specialist sooty mold (Scorias spongiosa colonizes the honeydew from a specialist beech aphid (Grylloprociphilus imbricator, ultimately decreasing the survival of seedlings beneath American beech trees (Fagus grandifolia. A common garden experiment indicated that this mortality resulted from moldy honeydew impairing leaf function rather than from chemical or microbial changes to the soil. In addition, aphids consistently and repeatedly colonized the same large beech trees, suggesting that seedling-depauperate islands may form beneath these trees. Thus this highly specialized three-way beech-aphid–fungus interaction has the potential to negatively impact local forest regeneration via a cascade of indirect effects.

  19. Generalising tree traversals and tree transformations to DAGs

    DEFF Research Database (Denmark)

    Bahr, Patrick; Axelsson, Emil


    We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead. The resul......We present a recursion scheme based on attribute grammars that can be transparently applied to trees and acyclic graphs. Our recursion scheme allows the programmer to implement a tree traversal or a tree transformation and then apply it to compact graph representations of trees instead...... as the complementing theory with a number of examples....

  20. Cardiac regeneration therapy: connections to cardiac physiology. (United States)

    Takehara, Naofumi; Matsubara, Hiroaki


    Without heart transplantation, a large number of patients with failing hearts worldwide face poor outcomes. By means of cardiomyocyte regeneration, cardiac regeneration therapy is emerging with great promise as a means for restoring loss of cardiac function. However, the limited success of clinical trials using bone marrow-derived cells and myoblasts with heterogeneous constituents, transplanted at a wide range of cell doses, has led to disagreement on the efficacy of cell therapy. It is therefore essential to reevaluate the evidence for the efficacy of cell-based cardiac regeneration therapy, focusing on targets, materials, and methodologies. Meanwhile, the revolutionary innovation of cardiac regeneration therapy is sorely needed to help the millions of people who suffer heart failure from acquired loss of cardiomyocytes. Cardiac regeneration has been used only in limited species or as a developing process in the rodent heart; now, the possibility of cardiomyocyte turnover in the human heart is being revisited. In the pursuit of this concept, the use of cardiac stem/progenitor stem cells in the cardiac niche must be focused to usher in a second era of cardiac regeneration therapy for the severely injured heart. In addition, tissue engineering and cellular reprogramming will advance the next era of treatment that will enable current cell-based therapy to progress to "real" cardiac regeneration therapy. Although many barriers remain, the prevention of refractory heart failure through cardiac regeneration is now becoming a realistic possibility.

  1. Heat exchanger versus regenerator: A fundamental comparison

    NARCIS (Netherlands)

    Will, M.E.; Waele, de A.T.A.M.


    Irreversible processes in regenerators and heat exchangers limit the performance of cryocoolers. In this paper we compare the performance of cryocoolers, operating with regenerators and heat exchangers from a fundamental point of view. The losses in the two systems are calculated from the entropy

  2. Adventitious shoots induction and plant regeneration from ...

    African Journals Online (AJOL)

    A highly efficient regeneration system is a prerequisite step for successful genetic transformation of watermelon cultivars (Citrullus lanatus L.). The objective of this study was to establish efficient in vitro plant regeneration for three watermelon cultivars. To achieve optimal conditions for adventitious shoot induction, the ...

  3. Plant regeneration in wheat mature embryo culture

    African Journals Online (AJOL)

    Kamil Haliloğlu


    Nov 9, 2011 ... Success in genetic engineering of cereals depends on the callus formation and efficient plant regeneration system. Callus formation and plant regeneration of wheat mature embryos ... compiled by modification of methods previously mentioned in ..... of more and readily available nutrition than artificial cul-.

  4. Animal regeneration: ancestral character or evolutionary novelty? (United States)

    Slack, Jonathan Mw


    An old question about regeneration is whether it is an ancestral character which is a general property of living matter, or whether it represents a set of specific adaptations to the different circumstances faced by different types of animal. In this review, some recent results on regeneration are assessed to see if they can throw any new light on this question. Evidence in favour of an ancestral character comes from the role of Wnt and bone morphogenetic protein signalling in controlling the pattern of whole-body regeneration in acoels, which are a basal group of bilaterian animals. On the other hand, there is some evidence for adaptive acquisition or maintenance of the regeneration of appendages based on the occurrence of severe non-lethal predation, the existence of some novel genes in regenerating organisms, and differences at the molecular level between apparently similar forms of regeneration. It is tentatively concluded that whole-body regeneration is an ancestral character although has been lost from most animal lineages. Appendage regeneration is more likely to represent a derived character resulting from many specific adaptations. © 2017 The Author.

  5. Axonal regeneration in zebrafish spinal cord (United States)

    Hui, Subhra Prakash


    Abstract In the present review we discuss two interrelated events—axonal damage and repair—known to occur after spinal cord injury (SCI) in the zebrafish. Adult zebrafish are capable of regenerating axonal tracts and can restore full functionality after SCI. Unlike fish, axon regeneration in the adult mammalian central nervous system is extremely limited. As a consequence of an injury there is very little repair of disengaged axons and therefore functional deficit persists after SCI in adult mammals. In contrast, peripheral nervous system axons readily regenerate following injury and hence allow functional recovery both in mammals and fish. A better mechanistic understanding of these three scenarios could provide a more comprehensive insight into the success or failure of axonal regeneration after SCI. This review summarizes the present understanding of the cellular and molecular basis of axonal regeneration, in both the peripheral nervous system and the central nervous system, and large scale gene expression analysis is used to focus on different events during regeneration. The discovery and identification of genes involved in zebrafish spinal cord regeneration and subsequent functional experimentation will provide more insight into the endogenous mechanism of myelination and remyelination. Furthermore, precise knowledge of the mechanism underlying the extraordinary axonal regeneration process in zebrafish will also allow us to unravel the potential therapeutic strategies to be implemented for enhancing regrowth and remyelination of axons in mammals. PMID:29721326

  6. Complement components of nerve regeneration conditioned fluid influence the microenvironment of nerve regeneration

    Directory of Open Access Journals (Sweden)

    Guang-shuai Li


    Full Text Available Nerve regeneration conditioned fluid is secreted by nerve stumps inside a nerve regeneration chamber. A better understanding of the proteinogram of nerve regeneration conditioned fluid can provide evidence for studying the role of the microenvironment in peripheral nerve regeneration. In this study, we used cylindrical silicone tubes as the nerve regeneration chamber model for the repair of injured rat sciatic nerve. Isobaric tags for relative and absolute quantitation proteomics technology and western blot analysis confirmed that there were more than 10 complement components (complement factor I, C1q-A, C1q-B, C2, C3, C4, C5, C7, C8ß and complement factor D in the nerve regeneration conditioned fluid and each varied at different time points. These findings suggest that all these complement components have a functional role in nerve regeneration.

  7. Hydroprocessing catalysts utilization and regeneration schemes

    Energy Technology Data Exchange (ETDEWEB)

    Furimsky, E.

    The catalyst reactor inventory represents an important part of the cost of hydroprocessing operation. The selection of a suitable catalyst and reactor is influenced by feedstock properties. Processes ensuring an uninterrupted operation during catalyst addition and withdrawal are preferred for processing high asphaltene and metal content feedstocks. The spent catalyst can be regenerated and returned to the operation if the extent of its deactivation is not high. The regeneration may be performed either in-situ or off-site. The former is suitable for fixed bed reactors whereas the catalyst from ebullated bed reactors must be regenerated off-site. The regeneration of spent catalysts heavily loaded with metals such as V, Ni and Fe may not be economic. Such catalysts may be suitable for metal reclamation. An environmentally safe method for catalyst disposal must be found if neither regeneration nor metal reclamation from spent catalysts can be performed.

  8. Regeneration limit of classical Shannon capacity (United States)

    Sorokina, M. A.; Turitsyn, S. K.


    Since Shannon derived the seminal formula for the capacity of the additive linear white Gaussian noise channel, it has commonly been interpreted as the ultimate limit of error-free information transmission rate. However, the capacity above the corresponding linear channel limit can be achieved when noise is suppressed using nonlinear elements; that is, the regenerative function not available in linear systems. Regeneration is a fundamental concept that extends from biology to optical communications. All-optical regeneration of coherent signal has attracted particular attention. Surprisingly, the quantitative impact of regeneration on the Shannon capacity has remained unstudied. Here we propose a new method of designing regenerative transmission systems with capacity that is higher than the corresponding linear channel, and illustrate it by proposing application of the Fourier transform for efficient regeneration of multilevel multidimensional signals. The regenerative Shannon limit—the upper bound of regeneration efficiency—is derived.

  9. Spinal cord self-repair during tail regeneration in Polypedates maculatus and putative role of FGF1 as a neurotrophic factor. (United States)

    Hota, Jutshina; Pati, Sushri Sangita; Mahapatra, Pravati Kumari


    Spinal cord injury could be fatal in man and often results in irreversible medical conditions affecting mobility. However, anuran amphibians win over such pathological condition by the virtue of regeneration abilities. The tail of anuran tadpoles therefore allures researchers to study spinal cord injury and self- repair process. In the present study, we inflicted injury to the spinal cord by means of surgical transection of the tail and investigated the self-repair activity in the tadpoles of the Indian tree frog Polypedates maculatus. We also demonstrate for the first time by immunofluorescence localization the expression pattern of Fibroblast Growth Factor1 (FGF1) during spinal cord regeneration which has not been documented earlier in anurans. FGF1, bearer of the mitogenic and neurotrophic properties seems to be expressed by progenitor cells that facilitate regeneration. Spinal cord during tail regeneration in P. maculatus attains functional recovery within a span of 2 weeks thus enabling the organism to survive in an aquatic medium till metamorphosis. Moreover, during the course of spinal cord regeneration in the regenerating tail, melanocytes showed an interesting behaviour as these neural crest derivatives were missing near the early regenerates until their reappearance where they were positioned in close proximity with the regenerated spinal cord as in the normal tail. Copyright © 2017 Elsevier B.V. All rights reserved.

  10. A recursive algorithm for trees and forests


    Guo, Song; Guo, Victor J. W.


    Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on $\\{1,2,\\ldots,n\\}$. Classical formulas for counting various trees such as rooted trees, bipartite trees, tripartite trees, plane trees, $k$-ary plane trees, $k$-edge colored trees follow immediately from our recursive relations.

  11. Phylogenetic trees in bioinformatics

    Energy Technology Data Exchange (ETDEWEB)

    Burr, Tom L [Los Alamos National Laboratory


    Genetic data is often used to infer evolutionary relationships among a collection of viruses, bacteria, animal or plant species, or other operational taxonomic units (OTU). A phylogenetic tree depicts such relationships and provides a visual representation of the estimated branching order of the OTUs. Tree estimation is unique for several reasons, including: the types of data used to represent each OTU; the use ofprobabilistic nucleotide substitution models; the inference goals involving both tree topology and branch length, and the huge number of possible trees for a given sample of a very modest number of OTUs, which implies that fmding the best tree(s) to describe the genetic data for each OTU is computationally demanding. Bioinformatics is too large a field to review here. We focus on that aspect of bioinformatics that includes study of similarities in genetic data from multiple OTUs. Although research questions are diverse, a common underlying challenge is to estimate the evolutionary history of the OTUs. Therefore, this paper reviews the role of phylogenetic tree estimation in bioinformatics, available methods and software, and identifies areas for additional research and development.

  12. Skewed Binary Search Trees

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Moruz, Gabriel


    It is well-known that to minimize the number of comparisons a binary search tree should be perfectly balanced. Previous work has shown that a dominating factor over the running time for a search is the number of cache faults performed, and that an appropriate memory layout of a binary search tree...... can reduce the number of cache faults by several hundred percent. Motivated by the fact that during a search branching to the left or right at a node does not necessarily have the same cost, e.g. because of branch prediction schemes, we in this paper study the class of skewed binary search trees....... For all nodes in a skewed binary search tree the ratio between the size of the left subtree and the size of the tree is a fixed constant (a ratio of 1/2 gives perfect balanced trees). In this paper we present an experimental study of various memory layouts of static skewed binary search trees, where each...

  13. Cytokinin profiles in the conifer tree Abies nordmanniana

    DEFF Research Database (Denmark)

    Rasmussen, Hanne Nina; Veierskov, Bjarke; Hansen-Møller, Jens


    in the crown and root system were sampled destructively in 4- and 6-year-old trees and analyzed for a range of cytokinins by LC-MS/MS. No seasonal patterns were detected in the root samples, and a major portion of cytokinin was in conjugated forms. Dramatic and consistent seasonal changes occurred in the crown......Abstract  Conifer trees are routinely manipulated hormonally to increase flowering, branching, or adjust crown shape for production purposes. This survey of internal cytokinin levels provides a background for such treatments in Abies nordmanniana, a tree of great economic interest. Reference points...

  14. Visualizing phylogenetic tree landscapes. (United States)

    Wilgenbusch, James C; Huang, Wen; Gallivan, Kyle A


    Genomic-scale sequence alignments are increasingly used to infer phylogenies in order to better understand the processes and patterns of evolution. Different partitions within these new alignments (e.g., genes, codon positions, and structural features) often favor hundreds if not thousands of competing phylogenies. Summarizing and comparing phylogenies obtained from multi-source data sets using current consensus tree methods discards valuable information and can disguise potential methodological problems. Discovery of efficient and accurate dimensionality reduction methods used to display at once in 2- or 3- dimensions the relationship among these competing phylogenies will help practitioners diagnose the limits of current evolutionary models and potential problems with phylogenetic reconstruction methods when analyzing large multi-source data sets. We introduce several dimensionality reduction methods to visualize in 2- and 3-dimensions the relationship among competing phylogenies obtained from gene partitions found in three mid- to large-size mitochondrial genome alignments. We test the performance of these dimensionality reduction methods by applying several goodness-of-fit measures. The intrinsic dimensionality of each data set is also estimated to determine whether projections in 2- and 3-dimensions can be expected to reveal meaningful relationships among trees from different data partitions. Several new approaches to aid in the comparison of different phylogenetic landscapes are presented. Curvilinear Components Analysis (CCA) and a stochastic gradient decent (SGD) optimization method give the best representation of the original tree-to-tree distance matrix for each of the three- mitochondrial genome alignments and greatly outperformed the method currently used to visualize tree landscapes. The CCA + SGD method converged at least as fast as previously applied methods for visualizing tree landscapes. We demonstrate for all three mtDNA alignments that 3D


    Directory of Open Access Journals (Sweden)

    Marly Antonielle Ávila


    Full Text Available Veredas (palm swamps is a type of vegetation associated with watercourses, characterized by the presence of Mauritia flexuosa palm trees. These systems are not well understood and suffer from high anthropogenic pressure. The aims of this study were to describe the natural regeneration of two swamp forests in vereda systems with different anthropogenic impacts and investigate if the variation in these plant communities are associated to edaphic conditions. The study was performed in preserved and impacted sites located in the Environmental Protection Area of the Pandeiros River in northern Minas Gerais. At each site, one hundred 25 m2 plots were established for surveying regenerating shrubs and trees (≥1 cm diameter at the base of the stem and < 3 cm diameter at breast height. Vegetation structure was evaluated by phytosociological parameters, similarity index, and size distribution of individuals. Regenerating strata was correlated with chemical and physical soil analyses. The vegetation at the preserved site was characterized by a higher number of individuals and a lower diversity but contained species that were typical of flooded areas. The results also showed differences in soil nutrient availability between sites that influenced the distribution of species at the two study sites.

  16. Tree-growth analyses to estimate tree species' drought tolerance

    NARCIS (Netherlands)

    Eilmann, B.; Rigling, A.


    Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree

  17. Big trees, old trees, and growth factor tables (United States)

    Kevin T. Smith


    The potential for a tree to reach a great size and to live a long life frequently captures the public's imagination. Sometimes the desire to know the age of an impressively large tree is simple curiosity. For others, the date-of-tree establishment can make a big diff erence for management, particularly for trees at historic sites or those mentioned in property...

  18. A bijection between phylogenetic trees and plane oriented recursive trees


    Prodinger, Helmut


    Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the respective representations a 2-partitions and trapezoidal words.

  19. A Suffix Tree Or Not a Suffix Tree?

    DEFF Research Database (Denmark)

    Starikovskaya, Tatiana; Vildhøj, Hjalte Wedel


    In this paper we study the structure of suffix trees. Given an unlabeled tree r on n nodes and suffix links of its internal nodes, we ask the question “Is r a suffix tree?”, i.e., is there a string S whose suffix tree has the same topological structure as r? We place no restrictions on S, in part...

  20. Conseqüências genéticas da regeneração natural de espécies arbóreas em área antrópica, AC, Brasil Genetic consequences of tree species natural regeneration in an anthropogenic area, Acre State, Brazil

    Directory of Open Access Journals (Sweden)

    Karina Martins


    Full Text Available O cedro (Cedrela odorata L. e o ipê-amarelo (Tabebuia serratifolia Nichols. são espécies arbóreas tropicais economicamente valiosas e que têm sido ameaçadas pela exploração madeireira predatória e pela fragmentação florestal. Ambas apresentam dispersão anemocórica e regeneram naturalmente em áreas de pastagem. Esse estudo comparou, para as duas espécies, a diversidade genética de indivíduos estabelecidos em pastagem e em floresta. Trinta indivíduos de ipê-amarelo foram genotipados com cinco locos isoenzimáticos e 54 de cedro, com quatro locos microssatélites. A diversidade genética foi elevada nas duas subpopulações. Para ipê-amarelo, a diversidade genética foi maior na pastagem. Para cedro, observou-se perda de alelos na pastagem (Â = 11,75 alelos/loco em comparação à floresta (Â = 14,50. Além disso, 31% dos alelos de cedro foram exclusivos da floresta. Não houve divergência genética entre as subpopulações de ipê-amarelo, porém, para cedro, houve divergência significativa, embora baixa (2,2%. Os resultados mostraram que, para as duas espécies, a subpopulação da pastagem não passou por um gargalo genético severo. A colonização de áreas antrópicas mostrou-se eficiente, mas há necessidade de fluxo gênico contínuo, por sucessivas gerações, entre as áreas para restabelecer (cedro e manter (ipê os níveis de diversidade genética observados na área de vegetação primária.Spanish cedar (Cedrela odorata L. and Yellow poui (Tabebuia serratifolia Nichols. are economically valuable tropical tree species that have been threatened by predatory logging and by forest fragmentation. Their seeds are wind-dispersed and both the species colonize and grow-up in pastures. This study compared the genetic diversity in a pasture-established population to a forest population. Thirty yellow poui trees were genotyped with five isozyme loci and fifty four spanish cedar trees were genotyped with four microsatellite

  1. NLCD 2001 - Tree Canopy (United States)

    Minnesota Department of Natural Resources — The National Land Cover Database 2001 tree canopy layer for Minnesota (mapping zones 39-42, 50-51) was produced through a cooperative project conducted by the...

  2. Trees for future forests

    DEFF Research Database (Denmark)

    Lobo, Albin

    Climate change creates new challenges in forest management. The increase in temperature may in the long run be beneficial for the forests in the northern latitudes, but the high rate at which climate change is predicted to proceed will make adaptation difficult because trees are long living sessile...... organisms. The aim of the present thesis is therefore to explore genetic resilience and phenotypic plasticity mechanisms that allows trees to adapt and evolve with changing climates. The thesis focus on the abiotic factors associated with climate change, especially raised temperatures and lack...... age of these tree species and the uncertainty around the pace and effect of climate, it remains an open question if the native populations can respond fast enough. Phenotypic plasticity through epigenetic regulation of spring phenology is found to be present in a tree species which might act...

  3. Value tree analysis

    International Nuclear Information System (INIS)

    Keeney, R.; Renn, O.; Winterfeldt, D. von; Kotte, U.


    What are the targets and criteria on which national energy policy should be based. What priorities should be set, and how can different social interests be matched. To answer these questions, a new instrument of decision theory is presented which has been applied with good results to controversial political issues in the USA. The new technique is known under the name of value tree analysis. Members of important West German organisations (BDI, VDI, RWE, the Catholic and Protestant Church, Deutscher Naturschutzring, and ecological research institutions) were asked about the goals of their organisations. These goals were then ordered systematically and arranged in a hierarchical tree structure. The value trees of different groups can be combined into a catalogue of social criteria of acceptability and policy assessment. The authors describe the philosophy and methodology of value tree analysis and give an outline of its application in the development of a socially acceptable energy policy. (orig.) [de

  4. Pulp regeneration: Current approaches and future challenges

    Directory of Open Access Journals (Sweden)

    Jingwen eYANG


    Full Text Available Regenerative endodontics aims to replace inflamed/necrotic pulp tissues with regenerated pulp-like tissues to revitalize teeth and improve life quality. Pulp revascularization case reports, which showed successful clinical and radiographic outcomes, indicated the possible clinical application of pulp regeneration via cell homing strategy. From a clinical point of view, functional pulp-like tissues should be regenerated with the characterization of vascularization, re-innervation, and dentin deposition with a regulated rate similar to that of normal pulp. Efficient root canal disinfection and proper size of the apical foramen are the two requisite preconditions for pulp regeneration. Progress has been made on pulp regeneration via cell homing strategies. This review focused on the requisite preconditions and cell homing strategies for pulp regeneration. In addition to the traditionally used mechanical preparation and irrigation, antibiotics, irrigation assisted with EndoVac apical negative-pressure system, and ultrasonic and laser irradiation are now being used in root canal disinfection. In addition, pulp-like tissues could be formed with the apical foramen less than 1 mm, although more studies are needed to determine the appropriate size. Moreover, signaling molecules including stromal cell derived factor (SDF-1α, basic Fibroblast Growth Factor (bFGF, Platelet Derived Growth Factor (PDGF, stem cell factor (SCF, and Granulocyte Colony-Stimulating Factor (G-CSF were used to achieve pulp-like tissue formation via a cell homing strategy. Studies on the cell sources of pulp regeneration might give some indications on the signaling molecular selection. The active recruitment of endogenous cells into root canals to regenerate pulp-like tissues is a novel concept that may offer an unprecedented opportunity for the near-term clinical translation of current biology-based therapies for dental pulp regeneration.

  5. Multiscale singularity trees

    DEFF Research Database (Denmark)

    Somchaipeng, Kerawit; Sporring, Jon; Johansen, Peter


    We propose MultiScale Singularity Trees (MSSTs) as a structure to represent images, and we propose an algorithm for image comparison based on comparing MSSTs. The algorithm is tested on 3 public image databases and compared to 2 state-of-theart methods. We conclude that the computational complexity...... of our algorithm only allows for the comparison of small trees, and that the results of our method are comparable with state-of-the-art using much fewer parameters for image representation....

  6. Type extension trees

    DEFF Research Database (Denmark)

    Jaeger, Manfred


    We introduce type extension trees as a formal representation language for complex combinatorial features of relational data. Based on a very simple syntax this language provides a unified framework for expressing features as diverse as embedded subgraphs on the one hand, and marginal counts...... of attribute values on the other. We show by various examples how many existing relational data mining techniques can be expressed as the problem of constructing a type extension tree and a discriminant function....

  7. Aberrant regeneration of the third cranial nerve. (United States)

    Shrestha, U D; Adhikari, S


    Aberrant regeneration of the third cranial nerve is most commonly due to its damage by trauma. A ten-month old child presented with the history of a fall from a four-storey building. She developed traumatic third nerve palsy and eventually the clinical features of aberrant regeneration of the third cranial nerve. The adduction of the eye improved over time. She was advised for patching for the strabismic amblyopia as well. Traumatic third nerve palsy may result in aberrant regeneration of the third cranial nerve. In younger patients, motility of the eye in different gazes may improve over time. © NEPjOPH.

  8. Resilience of ponderosa and lodgepole pine forests to mountain pine beetle disturbance and limited regeneration (United States)

    Briggs, Jenny S.; Hawbaker, Todd J.; Vandendriesche, Don


    After causing widespread mortality in lodgepole pine forests in North America, the mountain pine beetle (MPB) has recently also affected ponderosa pine, an alternate host species that may have different levels of resilience to this disturbance. We collected field data in ponderosa pine- and lodgepole pine-dominated forests attacked by MPB in Colorado and then simulated stand growth over 200 years using the Forest Vegetation Simulator. We compared scenarios of no disturbance with scenarios of MPB-caused mortality, both with and without regeneration. Results indicated that basal area and tree density recovered to predisturbance levels relatively rapidly (within 1‐8 decades) in both forest types. However, convergence of the disturbed conditions with simulated undisturbed conditions took longer (12‐20+ decades) and was delayed by the absence of regeneration. In MPB-affected ponderosa pine forests without regeneration, basal area did not converge with undisturbed conditions within 200 years, implying lower resilience in this ecosystem. Surface fuels accumulated rapidly in both forest types after MPB-induced mortality, remaining high for 3‐6 decades in simulations. Our results suggest that future patterns of succession, regeneration, fuel loading, climate, and disturbance interactions over long time periods should be considered in management strategies addressing MPB effects in either forest type, but particularly in ponderosa pine.

  9. Tree felling 2014

    CERN Multimedia


    With a view to creating new landscapes and making its population of trees safer and healthier, this winter CERN will complete the tree-felling campaign started in 2010.   Tree felling will take place between 15 and 22 November on the Swiss part of the Meyrin site. This work is being carried out above all for safety reasons. The trees to be cut down are at risk of falling as they are too old and too tall to withstand the wind. In addition, the roots of poplar trees are very powerful and spread widely, potentially damaging underground networks, pavements and roadways. Compensatory tree planting campaigns will take place in the future, subject to the availability of funding, with the aim of creating coherent landscapes while also respecting the functional constraints of the site. These matters are being considered in close collaboration with the Geneva nature and countryside directorate (Direction générale de la nature et du paysage, DGNP). GS-SE Group

  10. Benefit-based tree valuation (United States)

    E.G. McPherson


    Benefit-based tree valuation provides alternative estimates of the fair and reasonable value of trees while illustrating the relative contribution of different benefit types. This study compared estimates of tree value obtained using cost- and benefit-based approaches. The cost-based approach used the Council of Landscape and Tree Appraisers trunk formula method, and...

  11. Attack Trees with Sequential Conjunction

    NARCIS (Netherlands)

    Jhawar, Ravi; Kordy, Barbara; Mauw, Sjouke; Radomirović, Sasa; Trujillo-Rasua, Rolando


    We provide the first formal foundation of SAND attack trees which are a popular extension of the well-known attack trees. The SAND at- tack tree formalism increases the expressivity of attack trees by intro- ducing the sequential conjunctive operator SAND. This operator enables the modeling of

  12. Reinforced Airfoil Shaped Body

    DEFF Research Database (Denmark)


    The present invention relates to an airfoil shaped body with a leading edge and a trailing edge extending along the longitudinal extension of the body and defining a profile chord, the airfoil shaped body comprising an airfoil shaped facing that forms the outer surface of the airfoil shaped body...

  13. Use of sonic tomography to detect and quantify wood decay in living trees. (United States)

    Gilbert, Gregory S; Ballesteros, Javier O; Barrios-Rodriguez, Cesar A; Bonadies, Ernesto F; Cedeño-Sánchez, Marjorie L; Fossatti-Caballero, Nohely J; Trejos-Rodríguez, Mariam M; Pérez-Suñiga, José Moises; Holub-Young, Katharine S; Henn, Laura A W; Thompson, Jennifer B; García-López, Cesar G; Romo, Amanda C; Johnston, Daniel C; Barrick, Pablo P; Jordan, Fulvia A; Hershcovich, Shiran; Russo, Natalie; Sánchez, Juan David; Fábrega, Juan Pablo; Lumpkin, Raleigh; McWilliams, Hunter A; Chester, Kathleen N; Burgos, Alana C; Wong, E Beatriz; Diab, Jonathan H; Renteria, Sonia A; Harrower, Jennifer T; Hooton, Douglas A; Glenn, Travis C; Faircloth, Brant C; Hubbell, Stephen P


    Field methodology and image analysis protocols using acoustic tomography were developed and evaluated as a tool to estimate the amount of internal decay and damage of living trees, with special attention to tropical rainforest trees with irregular trunk shapes. Living trunks of a diversity of tree species in tropical rainforests in the Republic of Panama were scanned using an Argus Electronic PiCUS 3 Sonic Tomograph and evaluated for the amount and patterns of internal decay. A protocol using ImageJ analysis software was used to quantify the proportions of intact and compromised wood. The protocols provide replicable estimates of internal decay and cavities for trees of varying shapes, wood density, and bark thickness. Sonic tomography, coupled with image analysis, provides an efficient, noninvasive approach to evaluate decay patterns and structural integrity of even irregularly shaped living trees.

  14. Use of sonic tomography to detect and quantify wood decay in living trees1 (United States)

    Gilbert, Gregory S.; Ballesteros, Javier O.; Barrios-Rodriguez, Cesar A.; Bonadies, Ernesto F.; Cedeño-Sánchez, Marjorie L.; Fossatti-Caballero, Nohely J.; Trejos-Rodríguez, Mariam M.; Pérez-Suñiga, José Moises; Holub-Young, Katharine S.; Henn, Laura A. W.; Thompson, Jennifer B.; García-López, Cesar G.; Romo, Amanda C.; Johnston, Daniel C.; Barrick, Pablo P.; Jordan, Fulvia A.; Hershcovich, Shiran; Russo, Natalie; Sánchez, Juan David; Fábrega, Juan Pablo; Lumpkin, Raleigh; McWilliams, Hunter A.; Chester, Kathleen N.; Burgos, Alana C.; Wong, E. Beatriz; Diab, Jonathan H.; Renteria, Sonia A.; Harrower, Jennifer T.; Hooton, Douglas A.; Glenn, Travis C.; Faircloth, Brant C.; Hubbell, Stephen P.


    Premise of the study: Field methodology and image analysis protocols using acoustic tomography were developed and evaluated as a tool to estimate the amount of internal decay and damage of living trees, with special attention to tropical rainforest trees with irregular trunk shapes. Methods and Results: Living trunks of a diversity of tree species in tropical rainforests in the Republic of Panama were scanned using an Argus Electronic PiCUS 3 Sonic Tomograph and evaluated for the amount and patterns of internal decay. A protocol using ImageJ analysis software was used to quantify the proportions of intact and compromised wood. The protocols provide replicable estimates of internal decay and cavities for trees of varying shapes, wood density, and bark thickness. Conclusions: Sonic tomography, coupled with image analysis, provides an efficient, noninvasive approach to evaluate decay patterns and structural integrity of even irregularly shaped living trees. PMID:28101433

  15. A neighborhood analysis of the consequences of Quercus suber decline for regeneration dynamics in Mediterranean forests.

    Directory of Open Access Journals (Sweden)

    Beatriz Ibáñez

    Full Text Available In forests, the vulnerable seedling stage is largely influenced by the canopy, which modifies the surrounding environment. Consequently, any alteration in the characteristics of the canopy, such as those promoted by forest dieback, might impact regeneration dynamics. Our work analyzes the interaction between canopy neighbors and seedlings in Mediterranean forests affected by the decline of their dominant species (Quercus suber. Our objective was to understand how the impacts of neighbor trees and shrubs on recruitment could affect future dynamics of these declining forests. Seeds of the three dominant tree species (Quercus suber, Olea europaea and Quercus canariensis were sown in six sites during two consecutive years. Using a spatially-explicit, neighborhood approach we developed models that explained the observed spatial variation in seedling emergence, survival, growth and photochemical efficiency as a function of the size, identity, health, abundance and distribution of adult trees and shrubs in the neighborhood. We found strong neighborhood effects for all the performance estimators, particularly seedling emergence and survival. Tree neighbors positively affected emergence, independently of species identity or health. Alternatively, seedling survival was much lower in neighborhoods dominated by defoliated and dead Q. suber trees than in neighborhoods dominated by healthy trees. For the two oak species, these negative effects were consistent over the three years of the experimental seedlings. These results indicate that ongoing changes in species' relative abundance and canopy trees' health might alter the successional trajectories of Mediterranean oak-forests through neighbor-specific impacts on seedlings. The recruitment failure of dominant late-successional oaks in the gaps opened after Q. suber death would indirectly favor the establishment of other coexisting woody species, such as drought-tolerant shrubs. This could lead current

  16. Shape memory polymers

    Energy Technology Data Exchange (ETDEWEB)

    Wilson, Thomas S.; Bearinger, Jane P.


    New shape memory polymer compositions, methods for synthesizing new shape memory polymers, and apparatus comprising an actuator and a shape memory polymer wherein the shape memory polymer comprises at least a portion of the actuator. A shape memory polymer comprising a polymer composition which physically forms a network structure wherein the polymer composition has shape-memory behavior and can be formed into a permanent primary shape, re-formed into a stable secondary shape, and controllably actuated to recover the permanent primary shape. Polymers have optimal aliphatic network structures due to minimization of dangling chains by using monomers that are symmetrical and that have matching amine and hydroxl groups providing polymers and polymer foams with clarity, tight (narrow temperature range) single transitions, and high shape recovery and recovery force that are especially useful for implanting in the human body.

  17. Shape memory polymers (United States)

    Wilson, Thomas S.; Bearinger, Jane P.


    New shape memory polymer compositions, methods for synthesizing new shape memory polymers, and apparatus comprising an actuator and a shape memory polymer wherein the shape memory polymer comprises at least a portion of the actuator. A shape memory polymer comprising a polymer composition which physically forms a network structure wherein the polymer composition has shape-memory behavior and can be formed into a permanent primary shape, re-formed into a stable secondary shape, and controllably actuated to recover the permanent primary shape. Polymers have optimal aliphatic network structures due to minimization of dangling chains by using monomers that are symmetrical and that have matching amine and hydroxyl groups providing polymers and polymer foams with clarity, tight (narrow temperature range) single transitions, and high shape recovery and recovery force that are especially useful for implanting in the human body.

  18. Regenerating America: Meeting the Challenge of Building Local Economies. (United States)

    Gabel, Medard; And Others

    The document includes five papers on the implications and applications of regeneration by the Regeneration Project, based in Emmaus, Pa. The first paper, "Regenerating America: Meeting the Challenge of Building Local Economies," (Medard Gabel) defines regeneration as economic recovery and growth, fostered by diversification within a…

  19. Habitat filtering across tree life stages in tropical forest communities (United States)

    Baldeck, C. A.; Harms, K. E.; Yavitt, J. B.; John, R.; Turner, B. L.; Valencia, R.; Navarrete, H.; Bunyavejchewin, S.; Kiratiprayoon, S.; Yaacob, A.; Supardi, M. N. N.; Davies, S. J.; Hubbell, S. P.; Chuyong, G. B.; Kenfack, D.; Thomas, D. W.; Dalling, J. W.


    Tropical tree communities are shaped by local-scale habitat heterogeneity in the form of topographic and edaphic variation, but the life-history stage at which habitat associations develop remains poorly understood. This is due, in part, to the fact that previous studies have not accounted for the widely disparate sample sizes (number of stems) that result when trees are divided into size classes. We demonstrate that the observed habitat structuring of a community is directly related to the number of individuals in the community. We then compare the relative importance of habitat heterogeneity to tree community structure for saplings, juveniles and adult trees within seven large (24–50 ha) tropical forest dynamics plots while controlling for sample size. Changes in habitat structuring through tree life stages were small and inconsistent among life stages and study sites. Where found, these differences were an order of magnitude smaller than the findings of previous studies that did not control for sample size. Moreover, community structure and composition were very similar among tree sub-communities of different life stages. We conclude that the structure of these tropical tree communities is established by the time trees are large enough to be included in the census (1 cm diameter at breast height), which indicates that habitat filtering occurs during earlier life stages. PMID:23843384

  20. Optimal tree design for daylighting in residential buildings

    Energy Technology Data Exchange (ETDEWEB)

    Hongbing, Wang [College of Landscape Architecture, Beijing Forestry University, 35, East Qinghua Rd., Beijing (China); Shanghai Botanical Garden, 1111, Longwu Rd., Shanghai (China); Jun, Qin; Yonghong, Hu [Shanghai Botanical Garden, 1111, Longwu Rd., Shanghai (China); Li, Dong [College of Landscape Architecture, Beijing Forestry University, 35, East Qinghua Rd., Beijing (China)


    Urban reforestation is advocated as an efficient countermeasure to the intensification of urban heat islands. The greening and beautification of residential quarters is one of the main concerns of residents, while lighting and ventilation are two main energy-consuming building services. Hence, the tree layout in green space between buildings is important, and it is necessary to determine the relationships between trees and buildings. This study takes Shanghai as a case study to optimize tree design between residential buildings and meet good daylighting requirements. Models were made using software such as AutoCAD and SketchUp. The relationships between maximum tree height and building separation were determined. For the same building layout, there were different tree height limits according to crown shape; the order of decreasing height limits was cylindrical, conical, spherical, and inverted conical crowns. Three cases having different green space between building layouts were studied. Their maximum tree heights differed. Overall, our model helps us realize good daylighting of a building environment. The formula allows us to determine which trees to plant between buildings in that we can predict the effects of future tree growth on building daylighting. (author)

  1. Tree height-diameter allometry across the United States. (United States)

    Hulshof, Catherine M; Swenson, Nathan G; Weiser, Michael D


    The relationship between tree height and diameter is fundamental in determining community and ecosystem structure as well as estimates of biomass and carbon storage. Yet our understanding of how tree allometry relates to climate and whole organismal function is limited. We used the Forest Inventory and Analysis National Program database to determine height-diameter allometries of 2,976,937 individuals of 293 tree species across the United States. The shape of the allometric relationship was determined by comparing linear and nonlinear functional forms. Mixed-effects models were used to test for allometric differences due to climate and floristic (between angiosperms and gymnosperms) and functional groups (leaf habit and shade tolerance). Tree allometry significantly differed across the United States largely because of climate. Temperature, and to some extent precipitation, in part explained tree allometric variation. The magnitude of allometric variation due to climate, however, had a phylogenetic signal. Specifically, angiosperm allometry was more sensitive to differences in temperature compared to gymnosperms. Most notably, angiosperm height was more negatively influenced by increasing temperature variability, whereas gymnosperm height was negatively influenced by decreasing precipitation and increasing altitude. There was little evidence to suggest that shade tolerance influenced tree allometry except for very shade-intolerant trees which were taller for any given diameter. Tree allometry is plastic rather than fixed and scaling parameters vary around predicted central tendencies. This allometric variation provides insight into life-history strategies, phylogenetic history, and environmental limitations at biogeographical scales.

  2. Tree height–diameter allometry across the United States (United States)

    Hulshof, Catherine M; Swenson, Nathan G; Weiser, Michael D


    The relationship between tree height and diameter is fundamental in determining community and ecosystem structure as well as estimates of biomass and carbon storage. Yet our understanding of how tree allometry relates to climate and whole organismal function is limited. We used the Forest Inventory and Analysis National Program database to determine height–diameter allometries of 2,976,937 individuals of 293 tree species across the United States. The shape of the allometric relationship was determined by comparing linear and nonlinear functional forms. Mixed-effects models were used to test for allometric differences due to climate and floristic (between angiosperms and gymnosperms) and functional groups (leaf habit and shade tolerance). Tree allometry significantly differed across the United States largely because of climate. Temperature, and to some extent precipitation, in part explained tree allometric variation. The magnitude of allometric variation due to climate, however, had a phylogenetic signal. Specifically, angiosperm allometry was more sensitive to differences in temperature compared to gymnosperms. Most notably, angiosperm height was more negatively influenced by increasing temperature variability, whereas gymnosperm height was negatively influenced by decreasing precipitation and increasing altitude. There was little evidence to suggest that shade tolerance influenced tree allometry except for very shade-intolerant trees which were taller for any given diameter. Tree allometry is plastic rather than fixed and scaling parameters vary around predicted central tendencies. This allometric variation provides insight into life-history strategies, phylogenetic history, and environmental limitations at biogeographical scales. PMID:25859325

  3. Tree manipulation experiment (United States)

    Nishina, K.; Takenaka, C.; Ishizuka, S.; Hashimoto, S.; Yagai, Y.


    Some forest operations such as thinning and harvesting management could cause changes in N cycling and N2O emission from soils, since thinning and harvesting managements are accompanied with changes in aboveground environments such as an increase of slash falling and solar radiation on the forest floor. However, a considerable uncertainty exists in effects of thinning and harvesting on N2O fluxes regarding changes in belowground environments by cutting trees. To focus on the effect of changes in belowground environments on the N2O emissions from soils, we conducted a tree manipulation experiment in Japanese cedar (Cryptomeria japonica) stand without soil compaction and slash falling near the chambers and measured N2O flux at 50 cm and 150 cm distances from the tree trunk (stump) before and after cutting. We targeted 5 trees for the manipulation and established the measurement chambers to the 4 directions around each targeted tree relative to upper slope (upper, left, right, lower positions). We evaluated the effect of logging on the emission by using hierarchical Bayesian model. HB model can evaluate the variability in observed data and their uncertainties in the estimation with various probability distributions. Moreover, the HB model can easily accommodate the non-linear relationship among the N2O emissions and the environmental factors, and explicitly take non-independent data (nested structure of data) for the estimation into account by using random effects in the model. Our results showed tree cutting stimulated N2O emission from soils, and also that the increase of N2O flux depended on the distance from the trunk (stump): the increase of N2O flux at 50 cm from the trunk (stump) was greater than that of 150 cm from the trunk. The posterior simulation of the HB model indicated that the stimulation of N2O emission by tree cut- ting could reach up to 200 cm in our experimental plot. By tree cutting, the estimated N2O emission at 0-40 cm from the trunk doubled

  4. Regeneration of monsoon rain forest in northern Australia: the sapling bank

    Energy Technology Data Exchange (ETDEWEB)

    Russell-Smith, J. [Conservation Commission of the Northern Territory, Palmerston, NT (Australia)


    As part of a wider study examining regeneration pathways in monsoon rain forest vegetation in northern Australia, a one-off, dry season census of saplings was undertaken along transects sampled at each of 33 relatively undisturbed sites broadly representative of the range of regional monsoon rain forest vegetation. Four floristic quadrat groups were derived through TWINSPAN classification. Subsequent analyses involved: (1) comparison of mean dry season stockings of juveniles occurring in different rain forest types, and their structural and environmental correlates; (2) comparison of the contributions of different life forms, and the influence of clonal reproduction in the sapling regeneration banks of different forest types; and (3) exploration of relationships between the distributions of saplings of common tree species with respect to seed bank, floristic, structural, and environmental variables. While data presented here require cautious interpretation given that processes of seedling/sapling recruitment and mortality are highly dynamic, sapling banks were found to be most dense on coarse-textured, moist soils, and least dense on coarse-textured, seasonally dry soils. Canopy cover and fire impact were shown to be highly influential on sapling distribution, especially for saplings of tree species and those growing on seasonally dry sites. Sapling densities were little influenced by proximity to rain forest margins, except for shrubs. The potential for clonal reproduction was significantly greater on dry sites, especially for trees. The majority of saplings sampled were derived from relatively few common, non-clonal, canopy tree species. Sapling distributions of 20 out of 23 common tree species were clumped in the vicinity of conspecific adults; for most species the strength of this relationship was greater than that for any other variable. 55 refs, 1 fig, 6 tabs

  5. Assessing the Effects of Periodic Flooding on the Population Structure and Recruitment Rates of Riparian Tree Forests

    Directory of Open Access Journals (Sweden)

    Jean-Sébastien Berthelot


    Full Text Available Riparian forest stands are subjected to a variety of hydrological stresses as a result of annual fluctuations in water levels during the growing season. Spring floods create additional water-related stress as a result of a major inflow of water that floods riverside land. This exploratory study assesses the impacts of successive floods on tree dynamics and regeneration in an active sedimentation area, while determining the age of the stands using the recruitment rates, tree structure and tree rings based on dendrochronological analysis. Environmental data were also recorded for each vegetation quadrat. In total, 2633 tree stems were tallied throughout the quadrats (200 m2, and tree specimens were analyzed based on the various flood zones. A total of 720 specimens were counted (100 m2 strip to measure natural regeneration. Higher recruitment rates are noted for the no-flood zones and lower rates in active floodplains. During the period of the establishment of tree species, the survival rates are comparable between the flood zones and the no-flood zones. Tree diameter distribution reveals a strong predominance of young trees in flooded areas. Different factors appear to come into play in the dynamics of riparian forest stands, including the disruptions associated with successive flooding.

  6. Composite Matrix Regenerator for Stirling Engines (United States)

    Knowles, Timothy R.


    This project concerns the design, fabrication and testing of carbon regenerators for use in Stirling power convertors. Radial fiber design with nonmetallic components offers a number of potential advantages over conventional steel regenerators: reduced conduction and pressure drop losses, and the capability for higher temperature, higher frequency operation. Diverse composite fabrication methods are explored and lessons learned are summarized. A pulsed single-blow test rig has been developed that has been used for generating thermal effectiveness data for different flow velocities. Carbon regenerators have been fabricated by carbon vapor infiltration of electroflocked preforms. Performance data in a small Stirling engine are obtained. Prototype regenerators designed for the BP-1000 power convertor were fabricated and delivered to NASA-Lewis.

  7. ADAPTATION OF REGENERANTS OF Vaccinium Corymbosum L

    African Journals Online (AJOL)



    May 9, 2011 ... Adaptation of regenerants of Vaccinium corymbosum ... functions of the sheet plants growing in an aseptic culture, in hothouses or open ground .... L. (Koralle) were preserved in alcohol-acetic acid (3:1). ..... and soil moisture.

  8. Chronological protein synthesis in regenerating rat liver. (United States)

    He, Jinjun; Hao, Shuai; Zhang, Hao; Guo, Fuzheng; Huang, Lingyun; Xiao, Xueyuan; He, Dacheng


    Liver regeneration has been studied for decades; however, its regulation remains unclear. In this study, we report a dynamic tracing of protein synthesis in rat regenerating liver with a new proteomic technique, (35) S in vivo labeling analysis for dynamic proteomics (SiLAD). Conventional proteomic techniques typically measure protein alteration in accumulated amounts. The SiLAD technique specifically detects protein synthesis velocity instead of accumulated amounts of protein through (35) S pulse labeling of newly synthesized proteins, providing a direct way for analyzing protein synthesis variations. Consequently, protein synthesis within short as 30 min was visualized and protein regulations in the first 8 h of regenerating liver were dynamically traced. Further, the 3.5-5 h post partial hepatectomy (PHx) was shown to be an important regulatory turning point by acute regulation of many proteins in the initiation of liver regeneration. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  9. Rapid plant regeneration of chrysanthemum (Chrysanthemum ...

    African Journals Online (AJOL)



    May 4, 2009 ... demand for chrysanthemum, it has become one of the first commercial targets for ... frequency of multiple shoot regeneration response was. 95 and 91%, for nodal ..... Dordrecht, The Netherlands, pp. 91-101. Prasad RN ...

  10. Grazing management that regenerates ecosystem function and ...

    African Journals Online (AJOL)

    Grazing management that regenerates ecosystem function and grazingland ... in ecosystem improvement, productivity, soil carbon and fertility, water-holding ... for sufficient time to produce resource improvement, sound animal production, and ...

  11. An experimental study of passive regenerator geometries

    DEFF Research Database (Denmark)

    Engelbrecht, Kurt; Nielsen, Kaspar Kirstein; Pryds, Nini


    Active magnetic regenerative (AMR) systems are being investigated because they represent a potentially attractive alternative to vapor compression technology. The performance of these systems is dependent on the heat transfer and pressure drop performance of the regenerator geometry. Therefore th...

  12. Fingernails Yield Clues to Limb Regeneration (United States)

    ... it is involved in limb formation in mammalian embryonic development, as well as limb regeneration in amphibians. ... of the nail stem cells and the underlying layer of cells called the nail epithelium are left ...

  13. Optimization of regeneration and transformation parameters in ...

    African Journals Online (AJOL)


    transformation and regeneration therefore optimization of these two factors is .... An analysis of variance was conducted using explants types x construct ... and significant differences between means were assessed by the. Tukey's test at 1 and ...

  14. Regeneration-associated macrophages: a novel approach to boost intrinsic regenerative capacity for axon regeneration

    Directory of Open Access Journals (Sweden)

    Min Jung Kwon


    Full Text Available Axons in central nervous system (CNS do not regenerate spontaneously after injuries such as stroke and traumatic spinal cord injury. Both intrinsic and extrinsic factors are responsible for the regeneration failure. Although intensive research efforts have been invested on extrinsic regeneration inhibitors, the extent to which glial inhibitors contribute to the regeneration failure in vivo still remains elusive. Recent experimental evidence has rekindled interests in intrinsic factors for the regulation of regeneration capacity in adult mammals. In this review, we propose that activating macrophages with pro-regenerative molecular signatures could be a novel approach for boosting intrinsic regenerative capacity of CNS neurons. Using a conditioning injury model in which regeneration of central branches of dorsal root ganglia sensory neurons is enhanced by a preceding injury to the peripheral branches, we have demonstrated that perineuronal macrophages surrounding dorsal root ganglia neurons are critically involved in the maintenance of enhanced regeneration capacity. Neuron-derived chemokine (C-C motif ligand 2 (CCL2 seems to mediate neuron-macrophage interactions conveying injury signals to perineuronal macrophages taking on a soley pro-regenerative phenotype, which we designate as regeneration-associated macrophages (RAMs. Manipulation of the CCL2 signaling could boost regeneration potential mimicking the conditioning injury, suggesting that the chemokine-mediated RAM activation could be utilized as a regenerative therapeutic strategy for CNS injuries.

  15. A numerical analysis of a reciprocating Active Magnetic Regenerator with a parallel-plate regenerator geometry

    DEFF Research Database (Denmark)

    Petersen, Thomas Frank; Pryds, Nini; Smith, Anders


    We have developed a two-dimensional model of a reciprocating Active Magnetic Regenerator(AMR) with a regenerator made of parallel plates arranged in a stack configuration. The time dependent,two-dimensional model solves the Navier-Stokes equations for the heat transfer fluid and the coupled heat...... transfer equations for the regenerator and the fluid. The model is implemented using the Finite Element Method. The model can be used to study both transient and steady-state phenomena in the AMR for any ratio of regenerator to fluid heat capacity. Results on the AMR performance for different design...

  16. Large-Scale Regeneration Patterns of Pinus nigra Subsp. salzmannii: Poor Evidence of Increasing Facilitation Across a Drought Gradient

    Directory of Open Access Journals (Sweden)

    Pedro Antonio Tíscar


    Full Text Available Tree recruitment is a key process underlying stand dynamics and sustainability in managed forests. Woody plant cover is known to affect the regeneration success of Pinus nigra, suggesting the existence of facilitative plant-plant interactions. The regeneration patterns of this Mediterranean pine were analyzed across its distribution area, using data from 3226 plots of the Spanish National Forest Inventory. We aimed to test the hypothesis that seedlings establishment occurs under higher values of either canopy or shrub cover in the driest populations, as predicted by the stress-gradient hypothesis. Data were analyzed by means of Generalized Linear Models and multivariate methods. Results revealed that regeneration failure occurs on a regional scale, and that regeneration is facilitated by tree canopy cover of 55%–80%. A non-linear pattern of interaction along an aridity gradient was identified, with competition at the wettest site, high facilitation at the mid-dry sites, and low facilitation at the driest site. Evidence suggests that some shrub species may facilitate recruitment in the harsher areas. Collectively, our results reduce the possibilities of adapting forest management to drying climates by the application of alternative silvicultural prescriptions involving canopy cover.

  17. Mapping post-fire forest regeneration and vegetation recovery using a combination of very high spatial resolution and hyperspectral satellite imagery (United States)

    Mitri, George H.; Gitas, Ioannis Z.


    Careful evaluation of forest regeneration and vegetation recovery after a fire event provides vital information useful in land management. The use of remotely sensed data is considered to be especially suitable for monitoring ecosystem dynamics after fire. The aim of this work was to map post-fire forest regeneration and vegetation recovery on the Mediterranean island of Thasos by using a combination of very high spatial (VHS) resolution (QuickBird) and hyperspectral (EO-1 Hyperion) imagery and by employing object-based image analysis. More specifically, the work focused on (1) the separation and mapping of three major post-fire classes (forest regeneration, other vegetation recovery, unburned vegetation) existing within the fire perimeter, and (2) the differentiation and mapping of the two main forest regeneration classes, namely, Pinus brutia regeneration, and Pinus nigra regeneration. The data used in this study consisted of satellite images and field observations of homogeneous regenerated and revegetated areas. The methodology followed two main steps: a three-level image segmentation, and, a classification of the segmented images. The process resulted in the separation of classes related to the aforementioned objectives. The overall accuracy assessment revealed very promising results (approximately 83.7% overall accuracy, with a Kappa Index of Agreement of 0.79). The achieved accuracy was 8% higher when compared to the results reported in a previous work in which only the EO-1 Hyperion image was employed in order to map the same classes. Some classification confusions involving the classes of P. brutia regeneration and P. nigra regeneration were observed. This could be attributed to the absence of large and dense homogeneous areas of regenerated pine trees in the study area.

  18. Properties of tree rings in LSST sensors

    International Nuclear Information System (INIS)

    Park, H.Y.; Tsybychev, D.; Nomerotski, A.


    Images of uniformly illuminated sensors for the Large Synoptic Survey Telescope have circular periodic patterns with an appearance similar to tree rings. These patterns are caused by circularly symmetric variations of the dopant concentration in the monocrystal silicon boule induced by the manufacturing process. Non-uniform charge density results in the parasitic electric field inside the silicon sensor, which may distort shapes of astronomical sources. In this study we analyzed data from fifteen LSST sensors produced by ITL to determine the main parameters of the tree rings: amplitude and period, and also variability across the sensors tested at Brookhaven National Laboratory. Tree ring pattern has a weak dependence on the wavelength. However the ring amplitude gets smaller as wavelength gets longer, since longer wavelengths penetrate deeper into the silicon. Tree ring amplitude gets larger as it gets closer to the outer part of the wafer, from 0.1 to 1.0%, indicating that the resistivity variation is larger for larger radii.

  19. Emdogain--periodontal regeneration based on biomimicry. (United States)

    Gestrelius, S; Lyngstadaas, S P; Hammarström, L


    Biomimicry has been introduced as a term for innovations inspired by nature [1]. Such innovations may appear in almost every part of modern society. This review on the effects of enamel matrix proteins on the formation of cementum and the development of emdogain for regeneration of periodontal tissues lost due to periodontitis shows an example of biomimicry in dentistry. Findings from clinical and laboratory investigations are summarized and the biological basis for enamel matrix-induced periodontal regeneration is discussed.


    Directory of Open Access Journals (Sweden)

    Łukasz KONIECZNY


    Full Text Available The article presents the methodology of Common Rail injector diagnostic, regeneration and regulation with use of professional test stands. The EPS 815 machine can be used to test and repair all BOSCH injectors fully satisfying the producer requirements and standards. The article describes an example injector diagnosis with use of such test stand and additionally presents appropriate injector regeneration and encoding techniques

  1. Brownfield regeneration: Towards strengthening social cohesion?

    Directory of Open Access Journals (Sweden)

    Minić Marta


    Full Text Available In broader terms, the paper refers to the topic of brownfield regeneration, as one of the most complex mechanisms for sustainable spatial development. In addition to the fact that brownfield regeneration demands a variety of instruments, such as: tax subsidies, the change of land use ownership, soil remediation, planning regulative amendments, etc., the complexity of brownfield regeneration is primarily seen in a number of stakeholders participating in such a process. Thus, the paper focuses on the social aspect of brownfield regeneration - precisely, on researching the community role and reviewing the possibilities for achieving the 'local' interests in complex developmental processes. The main research hypothesis is that brownfield regeneration positively affects the creation of and strengthening the social cohesion in the areas close to the brownfield site. More precisley, the paper presents the ways towards strenghtening social cohesion in the initial phase of the brownfield regeneration process, as well as the effects of such a process in its operationalisation phase on social cohesion. The thesis is examined by two main parameters: 1 participation of local community, and 2 social costs and benefits of brownfield regeneration versus greenfield investment. The research results are presented in the form of argumentative essay. In fact, the critical overview of arguments for and against the main research hypothesis is provided based on the review of interdisciplinary literature in the domain of brownfield regeneration. Such research organisation ensures the identification and description of the measures needed for strengthening social cohesion, as an utmost goal of this research. The final research contribution is about offering the guidelines for similar methodological approach in urban research.

  2. Straight-Pore Microfilter with Efficient Regeneration (United States)

    Liu, Han; LaConti, Anthony B.; McCallum. Thomas J.; Schmitt, Edwin W.


    A novel, high-efficiency gas particulate filter has precise particle size screening, low pressure drop, and a simple and fast regeneration process. The regeneration process, which requires minimal material and energy consumption, can be completely automated, and the filtration performance can be restored within a very short period of time. This filter is of a novel material composite that contains the support structure and a novel coating.

  3. Abiotic factors influencing tropical dry forests regeneration

    Directory of Open Access Journals (Sweden)

    Ceccon Eliane


    Full Text Available Tropical dry forests represent nearly half the tropical forests in the world and are the ecosystems registering the greatest deterioration from the anthropogenic exploitation of the land. This paper presents a review on the dynamics of tropical dry forests regeneration and the main abiotic factors influencing this regeneration, such as seasonal nature, soil fertility and humidity, and natural and anthropic disturbances. The main purpose is to clearly understand an important part of TDF succession dynamics.

  4. Protoplast formation and regeneration in Lactobacillus delbrueckii


    Singhvi, Mamta; Joshi, Dipti; Gaikaiwari, Shalaka; Gokhale, Digambar V.


    Method for production and regeneration of Lactobacillus delbrueckii protoplasts are described. The protoplasts were obtained by treatment with a mixture of lysozyme and mutanolysin in protoplast buffer at pH 6.5 with different osmotic stabilizers. The protoplasts were regenerated on deMan, Rogosa and Sharpe (MRS) with various osmotic stabilizers. Maximum protoplast formation was obtained in protoplast buffer with sucrose as an osmotic stabilizer using a combination of lysozyme (1 mg/ml) and m...

  5. Continuous microwave regeneration apparatus for absorption media (United States)

    Smith, Douglas D.


    A method and apparatus for continuously drying and regenerating ceramic beads for use in process gas moisture drying operations such as glove boxes. A microwave energy source is coupled to a process chamber to internally heat the ceramic beads and vaporize moisture contained therein. In a preferred embodiment, the moisture laden ceramic beads are conveyed toward the microwave source by a screw mechanism. The regenerated beads flow down outside of the screw mechanism and are available to absorb additional moisture.

  6. Planting and care of fine hardwood seedlings: Designing hardwood tree plantings for wildlife (United States)

    Brian J. MacGowan


    Woody plants can be of value to many wildlife species. The species of tree or shrub, or the location, size, and shape of planting can all have an impact on wildlife. The purpose of this paper is to discuss the benefits of trees and shrubs for wildlife and how to design tree and shrub plantings for wildlife. Some of the practices may conflict with other management...

  7. Optimization of scaled-up chitosan microparticles for bone regeneration

    International Nuclear Information System (INIS)

    Jayasuriya, A Champa; Bhat, Archana


    The aim of this study was to scale-up and optimize the chitosan (CS) microparticles (MPs) from 1x batch (41-85 mg) to 4x batch (270-567 mg) to be used in bone regeneration. The MPs used in the present study were prepared by double emulsification technique using CS as a base material under physiologically friendly conditions throughout the process. Structural integrity of MPs was improved creating cross-links between amine groups in CS and phosphate groups in tripolyphosphate (TPP) which has been used as an ionic cross-linking agent. The cross-linking density was varied using different amounts of TPP to CS such as 0%, 8%, 32%, 64% and 110% (w/w). The CS MPs were approximately spherical in shape with a size of 30-50 μm according to scanning electron microscopy results. X-ray diffraction data revealed having TPP in the CS MPs. The evidence of ionic cross-links in the CS MPs was analyzed using Fourier Transform Infra Red. When we scaled-up the yield of MPs, we investigated that 64% TPP cross-linking density provided the best quality MPs. In addition, those MPs provided the yield from 75 mg to 310 mg when scaled up from 1x to 4x batch, respectively. The MPs developed have a great potential to be used as an injectable scaffold for bone regeneration including orthopedic and craniofacial applications using minimally invasive conditions compared with conventional three-dimensional scaffolds.

  8. Fuel cell catholyte regenerating apparatus

    International Nuclear Information System (INIS)

    Struthers, R. C.


    A catholyte regenerating apparatus for a fuel cell having a cathode section containing a catholyte solution and wherein fuel cell reaction reduces the catholyte to gas and water. The apparatus includes means to conduct partically reduced water diluted catholyte from the fuel cell and means to conduct the gas from the fuel cell to a mixing means. An absorption tower containing a volume of gas absorbing liquid solvent receives the mixed together gas and diluted catholyte from the mixing means within the absorption column, the gas is absorbed by the solvent and the gas ladened solvent and diluted catholyte are commingled. A liquid transfer means conducts gas ladened commingled. A liquid transfer means conducts gas ladened commingled solvent and electrolyte from the absorption column to an air supply means wherein air is added and commingled therewith and a stoichiometric volume of oxygen from the air is absorbed thereby. A second liquid transfer means conducts the gas ladened commingled solvent and diluted catholyte into a catalyst column wherein the oxygen and gas react to reconstitute the catholyte from which the gas was generated wna wherein the reconstituted diluted catholyte is separated from the solvent. Recirculating means conducts the solvent from the catalyst column back into the absorption column and liquid conducting means conducts the reconstituted catholyte to a holding tank preparatory for catholyte to a holding tank preparatory for recirculation through the cathode section of the fuel cell

  9. Advances in plasma skin regeneration. (United States)

    Foster, K Wade; Moy, Ronald L; Fincher, Edgar F


    Plasma skin regeneration (PSR) is a novel method of resurfacing that uses plasma energy to create a thermal effect on the skin. PSR is different from lasers, light sources, and ablative lasers in that it is not chromophore dependent and does not vaporize tissue, but leaves a layer of intact, desiccated epidermis that acts as a natural biologic dressing and promotes wound healing and rapid recovery. Histological studies performed on plasma resurfacing patients have confirmed continued collagen production, reduction of elastosis, and progressive skin rejuvenation beyond 1 year after treatment. PSR has received US Food and Drug Administration 510 (k) clearance for treatment of rhytides of the body, superficial skin lesions, actinic keratoses, viral papillomata, and seborrheic keratoses. PSR also has beneficial effects in the treatment of other conditions including dyschromias, photoaging, skin laxity, and acne scars. The safety profile of PSR is excellent, and there have been no reports of demarcation lines in perioral, periorbital, or jawline areas, as can sometimes be observed following CO2 resurfacing. PSR is effective in improving facial and periorbital rhytides and can be used on nonfacial sites, including the hands, neck, and chest. Numerous treatment protocols with variable energy settings allow for individualized treatments and provide the operator with fine control over the degree of injury and length of subsequent recovery time.

  10. Immunology Guides Skeletal Muscle Regeneration

    Directory of Open Access Journals (Sweden)

    F. Andrea Sass


    Full Text Available Soft tissue trauma of skeletal muscle is one of the most common side effects in surgery. Muscle injuries are not only caused by accident-related injuries but can also be of an iatrogenic nature as they occur during surgical interventions when the anatomical region of interest is exposed. If the extent of trauma surpasses the intrinsic regenerative capacities, signs of fatty degeneration and formation of fibrotic scar tissue can occur, and, consequentially, muscle function deteriorates or is diminished. Despite research efforts to investigate the physiological healing cascade following trauma, our understanding of the early onset of healing and how it potentially determines success or failure is still only fragmentary. This review focuses on the initial physiological pathways following skeletal muscle trauma in comparison to bone and tendon trauma and what conclusions can be drawn from new scientific insights for the development of novel therapeutic strategies. Strategies to support regeneration of muscle tissue after injury are scarce, even though muscle trauma has a high incidence. Based on tissue specific differences, possible clinical treatment options such as local immune-modulatory and cell therapeutic approaches are suggested that aim to support the endogenous regenerative potential of injured muscle tissues.

  11. Limb Regeneration in Axolotl: Is It Superhealing?

    Directory of Open Access Journals (Sweden)

    Stéphane Roy


    Full Text Available The ability of axolotls to regenerate their limbs is almost legendary. In fact, urodeles such as the axolotl are the only vertebrates that can regenerate multiple structures like their limbs, jaws, tail, spinal cord, and skin (the list goes on throughout their lives. It is therefore surprising to realize, although we have known of their regenerative potential for over 200 years, how little we understand the mechanisms behind this achievement of adult tissue morphogenesis. Many observations can be drawn between regeneration and other disciplines such as development and wound healing. In this review, we present new developments in functional analysis that will help to address the role of specific genes during the process of regeneration. We also present an analysis of the resemblance between wound healing and regeneration, and discuss whether axolotls are superhealers. A better understanding of these animals' regenerative capacity could lead to major benefits by providing regenerative medicine with directions on how to develop therapeutic approaches leading to regeneration in humans.

  12. Silymarin Accelerates Liver Regeneration after Partial Hepatectomy

    Directory of Open Access Journals (Sweden)

    Jia-Ping Wu


    Full Text Available Partial hepatectomy (PHx is a liver regeneration physiological response induced to maintain homeostasis. Liver regeneration evolved presumably to protect wild animals from catastrophic liver loss caused by toxins or tissue injury. Silymarin (Sm ability to stimulate liver regeneration has been an object of curiosity for many years. Silymarin has been investigated for use as an antioxidant and anticarcinogen. However, its use as a supportive treatment for liver damage is elusive. In this study, we fed silymarin (Sm, 25 mg/kg to male Sprague-Dawley rats for 7 weeks. Surgical 2/3 PHx was then conducted on the rats at 6 hrs, 24 hrs, and 72 hrs. Western blot and RT-PCR were conducted to detect the cell cycle activities and silymarin effects on hepatic regeneration. The results showed that silymarin enhanced liver regeneration by accelerating the cell cycle in PHx liver. Silymarin led to increased G1 phase (cyclin D1/pRb, S phase (cyclin E/E2F, G2 phase (cyclin B, and M phase (cyclin A protein and mRNA at 6 hrs, 24 hrs, and 72 hrs PHx. HGF, TGFα, and TGFβ1 growth factor expressions were also enhanced. We suggest that silymarin plays a crucial role in accelerated liver regeneration after PHx.


    Directory of Open Access Journals (Sweden)

    Chayane Cristina de Souza


    Full Text Available ABSTRACT Studies on the natural regeneration of tree species communities are important for providing information on forest development capacity. This research aimed to evaluate the floristic-structural variations of the tree regenerative component along a topographic gradient in an ecotonal area between a Mixed Ombrophilous Forest and a Deciduous Seasonal Forest of Santa Catarina, Brazil. 30 sampling units of which all regenerating tree species individuals have been identified were allocated in the forest fragment. The sampling units were then distributed along a topographic gradient into lower, intermediate and upper sectors. Abundance, richness, Shannon's diversity index (H' and Pielou's evenness index (J have been determined for both the whole community as for each sector. The community floristic-structural organization was verified by the means of the non-metric multidimensional scaling (NMDS, the indicator species analysis and the permutational multivariate analysis of variance (PERMANOVA. Abundance differences among sectors were analyzed through the Kruskal-Wallis test with post hoc multiple nonparametric test while richness differences were verified through rarefaction. Regenerating individuals density in the upper sector [129 (21.300 ind.ha-1] was lower than both in the lower [401 (63.800 ind.ha-1] and intermediary [241 (36.300 ind.ha-1] sectors. There was variation in the floristic-structural composition (p < 0.001 among topographic positions; the lower sector was the most distinct one and showed the highest number of indicator species.

  14. Steiner trees in industry

    CERN Document Server

    Du, Ding-Zhu


    This book is a collection of articles studying various Steiner tree prob­ lems with applications in industries, such as the design of electronic cir­ cuits, computer networking, telecommunication, and perfect phylogeny. The Steiner tree problem was initiated in the Euclidean plane. Given a set of points in the Euclidean plane, the shortest network interconnect­ ing the points in the set is called the Steiner minimum tree. The Steiner minimum tree may contain some vertices which are not the given points. Those vertices are called Steiner points while the given points are called terminals. The shortest network for three terminals was first studied by Fermat (1601-1665). Fermat proposed the problem of finding a point to minimize the total distance from it to three terminals in the Euclidean plane. The direct generalization is to find a point to minimize the total distance from it to n terminals, which is still called the Fermat problem today. The Steiner minimum tree problem is an indirect generalization. Sch...

  15. Effects of Acidic Deposition and Soil Acidification on Sugar Maple Trees in the Adirondack Mountains, New York (United States)

    T. J. Sullivan; G. B. Lawrence; S. W. Bailey; T. C. McDonnell; C. M. Beier; K. C. Weathers; G. T. McPherson; D. A. Bishop


    We documented the effects of acidic atmospheric deposition and soil acidification on the canopy health, basal area increment, and regeneration of sugar maple (SM) trees across the Adirondack region of New York State, in the northeastern United States, where SM are plentiful but not well studied and where widespread depletion of soil calcium (Ca) has been...

  16. Above-ground biomass investments and light interception of tropical forest trees and lianas early in succession

    NARCIS (Netherlands)

    Selaya, N.G.; Anten, N.P.R.; Oomen, R.J.; Matthies, M.; Werger, M.J.A.


    Background and Aims Crown structure and above-ground biomass investment was studied in relation to light interception of trees and lianas growing in a 6-month-old regenerating forest. Methods The vertical distribution of total above-ground biomass, height, diameter, stem density, leaf angles and


    Directory of Open Access Journals (Sweden)

    Silas Mochiutti


    Full Text Available This study analyzes the structure and floristic composition of the regeneration of native forest species under black-wattle plantation, established 16 years ago in a riparian area, and it verifies the possibility of the black-wattle be considered an invasive species of this environment. The tree stratum (circumference at breast height (CBH ≥15 cm was evaluated in 12 plots of 100 m2, established in four blocks. The natural regeneration stratum (0.3 m height to <15 cm CBH was evaluated in two subplots of 9 m2, established in opposite vertexes of each plot. The tree stratum was composed by 26 species of 14 families and the natural regeneration stratum by 49 species of 23 families. The Shannon diversity index for species, considering all plots, was 2.60 and 3.06 to the tree and natural regeneration strata, respectively. The native species, Casearia sylvestris, Myrsine lorentziana and Zanthoxylum petiolare presented the larger importance value in the tree stratum and Faramea marginata, Myrsine lorentziana and Myrcia glabra the biggest density in the natural regeneration stratum. The ecological characteristics of the species found in several height strata indicated that the forest succession process is in evolution. The black-wattle did not regenerate in this area and the planted trees of this species are in the senescence phase. Only 100 tree/ha of black-wattle were found, which represents 4.5% of the original population. Thus, black-wattle is not an invasive species for this environment.

  18. Cisgenic apple trees; development, characterization and performance

    Directory of Open Access Journals (Sweden)

    Frans A. Krens


    Full Text Available Two methods were developed for the generation of cisgenic apples. Both have been successfully applied producing trees. The first method avoids the use of any foreign selectable marker genes; only the gene-of-interest is integrated between the T-DNA border sequences. The second method makes use of recombinase-based marker excision. For the first method we used the MdMYB10 gene from a red-fleshed apple coding for a transcription factor involved in regulating anthocyanin biosynthesis. Red plantlets were obtained and presence of the cisgene was confirmed. Plantlets were grafted and grown in a greenhouse. After three years, the first flowers appeared, showing red petals. Pollination led to production of red-fleshed cisgenic apples. The second method used the pM(arkerF(ree vector system, introducing the scab resistance gene Rvi6, derived from apple. Agrobacterium-mediated transformation, followed by selection on kanamycin, produced genetically modified apple lines. Next, leaves from in vitro material were treated to activate the recombinase leading to excision of selection genes. Subsequently, the leaf explants were subjected to negative selection for marker-free plantlets by inducing regeneration on medium containing 5-fluorocytosine. After verification of the marker-free nature, the obtained plants were grafted onto rootstocks. Young trees from four cisgenic lines and one intragenic line, all containing Rvi6, were planted in an orchard. Appropriate controls were incorporated in this trial. We scored scab incidence for three consecutive years on leaves after inoculations with Rvi6-avirulent strains. One cisgenic line and the intragenic line performed as well as the resistant control. In 2014 trees started to overcome their juvenile character and formed flowers and fruits. The first results of scoring scab symptoms on apple fruits were obtained. Apple fruits from susceptible controls showed scab symptoms, while fruits from cisgenic and intragenic


    Directory of Open Access Journals (Sweden)

    E. Hadas


    Full Text Available The estimation of dendrometric parameters has become an important issue for agriculture planning and for the efficient management of orchards. Airborne Laser Scanning (ALS data is widely used in forestry and many algorithms for automatic estimation of dendrometric parameters of individual forest trees were developed. Unfortunately, due to significant differences between forest and fruit trees, some contradictions exist against adopting the achievements of forestry science to agricultural studies indiscriminately. In this study we present the methodology to identify individual trees in apple orchard and estimate heights of individual trees, using high-density LiDAR data (3200 points/m2 obtained with Unmanned Aerial Vehicle (UAV equipped with Velodyne HDL32-E sensor. The processing strategy combines the alpha-shape algorithm, principal component analysis (PCA and detection of local minima. The alpha-shape algorithm is used to separate tree rows. In order to separate trees in a single row, we detect local minima on the canopy profile and slice polygons from alpha-shape results. We successfully separated 92 % of trees in the test area. 6 % of trees in orchard were not separated from each other and 2 % were sliced into two polygons. The RMSE of tree heights determined from the point clouds compared to field measurements was equal to 0.09 m, and the correlation coefficient was equal to 0.96. The results confirm the usefulness of LiDAR data from UAV platform in orchard inventory.

  20. Determining Geometric Parameters of Agricultural Trees from Laser Scanning Data Obtained with Unmanned Aerial Vehicle (United States)

    Hadas, E.; Jozkow, G.; Walicka, A.; Borkowski, A.


    The estimation of dendrometric parameters has become an important issue for agriculture planning and for the efficient management of orchards. Airborne Laser Scanning (ALS) data is widely used in forestry and many algorithms for automatic estimation of dendrometric parameters of individual forest trees were developed. Unfortunately, due to significant differences between forest and fruit trees, some contradictions exist against adopting the achievements of forestry science to agricultural studies indiscriminately. In this study we present the methodology to identify individual trees in apple orchard and estimate heights of individual trees, using high-density LiDAR data (3200 points/m2) obtained with Unmanned Aerial Vehicle (UAV) equipped with Velodyne HDL32-E sensor. The processing strategy combines the alpha-shape algorithm, principal component analysis (PCA) and detection of local minima. The alpha-shape algorithm is used to separate tree rows. In order to separate trees in a single row, we detect local minima on the canopy profile and slice polygons from alpha-shape results. We successfully separated 92 % of trees in the test area. 6 % of trees in orchard were not separated from each other and 2 % were sliced into two polygons. The RMSE of tree heights determined from the point clouds compared to field measurements was equal to 0.09 m, and the correlation coefficient was equal to 0.96. The results confirm the usefulness of LiDAR data from UAV platform in orchard inventory.

  1. The cancer paradigms of mammalian regeneration: can mammals regenerate as amphibians? (United States)

    Sarig, Rachel; Tzahor, Eldad


    Regeneration in mammals is restricted to distinct tissues and occurs mainly by expansion and maturation of resident stem cells. During regeneration, even subtle mutations in the proliferating cells may cause a detrimental effect by eliciting abnormal differentiation or malignant transformation. Indeed, cancer in mammals has been shown to arise through deregulation of stem cells maturation, which often leads to a differentiation block and cell transformation. In contrast, lower organisms such as amphibians retain a remarkable regenerative capacity in various organs, which occurs via de- and re-differentiation of mature cells. Interestingly, regenerating amphibian cells are highly resistant to oncogenic transformation. Therapeutic approaches to improve mammalian regeneration mainly include stem-cell transplantations; but, these have proved unsuccessful in non-regenerating organs such as the heart. A recently developed approach is to induce de-differentiation of mature cardiomyocytes using factors that trigger their re-entry into the cell cycle. This novel approach raises numerous questions regarding the balance between transformation and regeneration induced by de-differentiation of mature mammalian somatic cells. Can this balance be controlled artificially? Do de-differentiated cells acquire the protection mechanisms seen in regenerating cells of lower organisms? Is this model unique to the cardiac tissue, which rarely develops tumors? This review describes regeneration processes in both mammals and lower organisms and, particularly, the ability of regenerating cells to avoid transformation. By comparing the characteristics of mammalian embryonic and somatic cells, we discuss therapeutic strategies of using various cell populations for regeneration. Finally, we describe a novel cardiac regeneration approach and its implications for regenerative medicine. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email

  2. Pore structure of natural and regenerated soil aggregates

    DEFF Research Database (Denmark)

    Naveed, Muhammad; Arthur, Emmanuel; de Jonge, Lis Wollesen


    Quantitative characterization of aggregate pore structure can reveal the evolution of aggregates under different land use and management practices and their effects on soil processes and functions. Advances in X-ray Computed Tomography (CT) provide powerful means to conduct such characterization....... This study examined aggregate pore structure of three differently managed same textured Danish soils (mixed forage cropping, MFC; mixed cash cropping, MCC; cereal cash cropping, CCC) for (i) natural aggregates, and (ii) aggregates regenerated after 20 months of incubation. In total, 27 aggregates (8-16 mm...... pore diameter of 200 and 170 Hm, respectively. Pore shape analysis indicated that CCC and MFC aggregates had an abundance of rounded and elongated pores, respectively, and those of MCC were in-between CCC and MFC. Aggregate pore structure development in the lysimeters was nearly similar irrespective...

  3. Clonal fidelity of chrysanthemum regenerated from long term cultures

    Directory of Open Access Journals (Sweden)

    Jevremović Slađana


    Full Text Available Morphological characteristics of flowers of long term regenerated chrysanthemum, cv. "White Spider", after ten years of micropropagation are investigated. Shoot cultures are established and maintained more than ten years by stem segment culture on MS medium supplemented with BAP and NAA (1.0, 0.1 mgL-1, respectively. Rooting of shoots (100 % has done on MS medium without hormones and it was very successful after ten years, as well as, after two or eight years of micropropagation. Acclimation of rooted chrysanthemum plantlets at greenhouse conditions was excellent and after appropriate photoperiod "in vitro" plants flowered 90.3 % and have the same flower color, shape and size as mother plants. Flower color changes of "in vitro" plants are observed during another flowering cycle one year after acclimatization. Observed variations of chrysanthemum flowers could be attributed to epigenetic factors.

  4. Region effects influence local tree species diversity. (United States)

    Ricklefs, Robert E; He, Fangliang


    Global patterns of biodiversity reflect both regional and local processes, but the relative importance of local ecological limits to species coexistence, as influenced by the physical environment, in contrast to regional processes including species production, dispersal, and extinction, is poorly understood. Failure to distinguish regional influences from local effects has been due, in part, to sampling limitations at small scales, environmental heterogeneity within local or regional samples, and incomplete geographic sampling of species. Here, we use a global dataset comprising 47 forest plots to demonstrate significant region effects on diversity, beyond the influence of local climate, which together explain more than 92% of the global variation in local forest tree species richness. Significant region effects imply that large-scale processes shaping the regional diversity of forest trees exert influence down to the local scale, where they interact with local processes to determine the number of coexisting species.

  5. Inferring epidemic contact structure from phylogenetic trees.

    Directory of Open Access Journals (Sweden)

    Gabriel E Leventhal

    Full Text Available Contact structure is believed to have a large impact on epidemic spreading and consequently using networks to model such contact structure continues to gain interest in epidemiology. However, detailed knowledge of the exact contact structure underlying real epidemics is limited. Here we address the question whether the structure of the contact network leaves a detectable genetic fingerprint in the pathogen population. To this end we compare phylogenies generated by disease outbreaks in simulated populations with different types of contact networks. We find that the shape of these phylogenies strongly depends on contact structure. In particular, measures of tree imbalance allow us to quantify to what extent the contact structure underlying an epidemic deviates from a null model contact network and illustrate this in the case of random mixing. Using a phylogeny from the Swiss HIV epidemic, we show that this epidemic has a significantly more unbalanced tree than would be expected from random mixing.

  6. Dinâmica da estrutura diamétrica da regeneração natural de espécies arbóreas e arbustivas no sub-bosque de povoamento puro de Mimosa scabrella Bentham, em área minerada, em Poços de Caldas, MG Diametric struture dynamics for tree and shrub natural regeneration understory within pure stands of Mimosa scabrella Bentham planted on a mined-out site at Poços de Caldas, Minas Gerais state

    Directory of Open Access Journals (Sweden)

    Mauro Eloi Nappo


    interno da sucessão.Retiro-Branco mine, a property of Companhia Geral de Minas, subsidiary of ALCOA Alumínio S.A., underwent bauxite extraction from 1978 to 1981. In 1982/1983 as part of its mine rehabilitation strategy, herbaceous species were hydroseeded and tree seedlings of Mimosa scabrella Bentham planted in the mining site. In 1997, 19 sample plots (50m² were established in this area for the initial characterization of the natural regeneration process. In 2000, a second inventory was performed in the same plots to characterize natural regeneration dynamics. The process of natural regeneration dynamics was characterized through quantitative and qualitative analyses of diameter distribution. These studies demonstrated that using continuous forest inventory with a sample plot grid is a viable tool for evaluating natural regeneration dynamics. The stratification process for natural regeneration was characterized. Pioneer and climax species are the main components of the inferior stratum and the secondary ones the main component of the superior stratum. Retiro-Branco forest was found to be undergoing intense structuring activity, characterizing initial stage of succession. Secondary species are the most dominant in classes with greatest height and diameter, being the most responsible for the superior stratum construction. Diameter distribution prediction using Markov Matrix proved to be a simple way for foreseeing both the succession process of natural regeneration and future ecological groupings of species, increasing the understanding of mechanisms that rule internal succession behavior.

  7. Visualization of Uncertain Contour Trees

    DEFF Research Database (Denmark)

    Kraus, Martin


    Contour trees can represent the topology of large volume data sets in a relatively compact, discrete data structure. However, the resulting trees often contain many thousands of nodes; thus, many graph drawing techniques fail to produce satisfactory results. Therefore, several visualization methods...... were proposed recently for the visualization of contour trees. Unfortunately, none of these techniques is able to handle uncertain contour trees although any uncertainty of the volume data inevitably results in partially uncertain contour trees. In this work, we visualize uncertain contour trees...... by combining the contour trees of two morphologically filtered versions of a volume data set, which represent the range of uncertainty. These two contour trees are combined and visualized within a single image such that a range of potential contour trees is represented by the resulting visualization. Thus...

  8. Generic Ising trees

    DEFF Research Database (Denmark)

    Durhuus, Bergfinnur Jøgvan; Napolitano, George Maria


    The Ising model on a class of infinite random trees is defined as a thermodynamiclimit of finite systems. A detailed description of the corresponding distribution of infinite spin configurations is given. As an application, we study the magnetization properties of such systems and prove that they......The Ising model on a class of infinite random trees is defined as a thermodynamiclimit of finite systems. A detailed description of the corresponding distribution of infinite spin configurations is given. As an application, we study the magnetization properties of such systems and prove...... that they exhibit no spontaneous magnetization. Furthermore, the values of the Hausdorff and spectral dimensions of the underlying trees are calculated and found to be, respectively,¯dh =2 and¯ds = 4/3....

  9. \\. Santalum album L. (sandalwood) is a small evergreen tree that ...

    Indian Academy of Sciences (India)

    once in late summer and again between October and December, are small and purplish brown. Sandal trees show considerable variation with respect to the shape, size of their leaf and fruit and the extent of heartwood. The heartwood and the essential oil obtained from it are among the oldest known perfumery material and ...


    NARCIS (Netherlands)

    Grijpma, D.W.; Pêgo, A.P.; Feijen, Jan


    The present invention relates to methods for providing shaped biodegradable and elastomeric structures of (co)polymers of 1,3­trimethylene carbonate (TMC) with improved (mechanical) properties which can be used for tissue or tissue component support, generation or regeneration. Such shaped

  11. ColorTree: a batch customization tool for phylogenic trees. (United States)

    Chen, Wei-Hua; Lercher, Martin J


    Genome sequencing projects and comparative genomics studies typically aim to trace the evolutionary history of large gene sets, often requiring human inspection of hundreds of phylogenetic trees. If trees are checked for compatibility with an explicit null hypothesis (e.g., the monophyly of certain groups), this daunting task is greatly facilitated by an appropriate coloring scheme. In this note, we introduce ColorTree, a simple yet powerful batch customization tool for phylogenic trees. Based on pattern matching rules, ColorTree applies a set of customizations to an input tree file, e.g., coloring labels or branches. The customized trees are saved to an output file, which can then be viewed and further edited by Dendroscope (a freely available tree viewer). ColorTree runs on any Perl installation as a stand-alone command line tool, and its application can thus be easily automated. This way, hundreds of phylogenic trees can be customized for easy visual inspection in a matter of minutes. ColorTree allows efficient and flexible visual customization of large tree sets through the application of a user-supplied configuration file to multiple tree files.

  12. Modality-Specific Axonal Regeneration: Towards selective regenerative neural interfaces

    Directory of Open Access Journals (Sweden)

    Parisa eLotfi


    Full Text Available Regenerative peripheral nerve interfaces have been proposed as viable alternatives for the natural control of robotic prosthetic devices. However, sensory and motor axons at the neural interface are of mixed submodality types, which difficult the specific recording from motor axons and the eliciting of precise sensory modalities through selective stimulation. Here we evaluated the possibility of using type-specific neurotrophins to preferentially entice the regeneration of defined axonal populations from transected peripheral nerves into separate compartments. Segregation of mixed sensory fibers from dorsal root ganglion neurons was evaluated in vitro by compartmentalized diffusion delivery of nerve growth factor (NGF and neurotrophin-3 (NT-3, to preferentially entice the growth of TrkA+ nociceptive and TrkC+ proprioceptive subsets of sensory neurons, respectively. The average axon length in the NGF channel increased 2.5 fold compared to that in saline or NT-3, whereas the number of branches increased 3 fold in the NT-3 channels. These results were confirmed using a 3-D Y-shaped in vitro assay showing that the arm containing NGF was able to entice a 5-fold increase in axonal length of unbranched fibers. To address if such segregation can be enticed in vivo, a Y-shaped tubing was used to allow regeneration of the transected adult rat sciatic nerve into separate compartments filled with either NFG or NT-3. A significant increase in the number of CGRP+ pain fibers were attracted towards the sural nerve, while N-52+ large diameter axons were observed in the tibial and NT-3 compartments. This study demonstrates the guided enrichment of sensory axons in specific regenerative chambers, and supports the notion that neurotrophic factors can be used to segregate sensory and perhaps motor axons in separate peripheral interfaces.

  13. Mechanical properties of a biodegradable bone regeneration scaffold (United States)

    Porter, B. D.; Oldham, J. B.; He, S. L.; Zobitz, M. E.; Payne, R. G.; An, K. N.; Currier, B. L.; Mikos, A. G.; Yaszemski, M. J.


    Poly (Propylene Fumarate) (PPF), a novel, bulk erosion, biodegradable polymer, has been shown to have osteoconductive effects in vivo when used as a bone regeneration scaffold (Peter, S. J., Suggs, L. J., Yaszemski, M. J., Engel, P. S., and Mikos, A. J., 1999, J. Biomater. Sci. Polym. Ed., 10, pp. 363-373). The material properties of the polymer allow it to be injected into irregularly shaped voids in vivo and provide mechanical stability as well as function as a bone regeneration scaffold. We fabricated a series of biomaterial composites, comprised of varying quantities of PPF, NaCl and beta-tricalcium phosphate (beta-TCP), into the shape of right circular cylinders and tested the mechanical properties in four-point bending and compression. The mean modulus of elasticity in compression (Ec) was 1204.2 MPa (SD 32.2) and the mean modulus of elasticity in bending (Eb) was 1274.7 MPa (SD 125.7). All of the moduli were on the order of magnitude of trabecular bone. Changing the level of NaCl from 20 to 40 percent, by mass, did not decrease Ec and Eb significantly, but did decrease bending and compressive strength significantly. Increasing the beta-TCP from 0.25 g/g PPF to 0.5 g/g PPF increased all of the measured mechanical properties of PPF/NVP composites. These results indicate that this biodegradable polymer composite is an attractive candidate for use as a replacement scaffold for trabecular bone.

  14. Plant diversity and regeneration in a disturbed isolated dry Afromontane forest in northern Ethiopia

    DEFF Research Database (Denmark)

    Aynekulu, Ermias; Aerts, Raf; Denich, Manfred


    We studied the diversity, community composition and natural regeneration of woody species in an isolated but relatively large (> 1,000 ha) dry Afromontane forest in northern Ethiopia to assess its importance for regional forest biodiversity conservation. The principal human-induced disturbance...... in biodiversity through local extinction of indigenous tree species. Despite the problems associated with conserving plant species diversity in small and isolated populations, this relic forest is of particular importance for regional conservation of forest biodiversity, as species with high conservation value...

  15. Natural forest regeneration in abandoned sugarcane fields in northeastern Brazil: floristic changes


    Nascimento,Ladivania Medeiros do; Sampaio,Everardo Valadares de Sá Barretto; Rodal,Maria Jesus Nogueira; Silva,Suzene Izídio da; Lins e Silva,Ana Carolina Borges


    Surveys were undertaken to examine the floristic changes during secondary succession in three areas of 12 and three of 20-year-old secondary forests in Pernambuco State, Brazil. Two hundred and six species were identified, with 136 being found in the 12-year-old secondary forest and 161 species in the 20-year-old forest. Fabaceae and Myrtaceae were the most important families, increasing in species numbers with regeneration age. Of the 216 species, 115 were trees, 48 shrubs, 16 herbaceous pla...

  16. Trees and the City: Diversity and Composition along a Neotropical Gradient of Urbanization

    Directory of Open Access Journals (Sweden)

    Rubén Ortega-Álvarez


    Full Text Available In this study we assessed tree species richness, density, and composition patterns along a gradient of urbanization of a megacity. Our results show that total, native, and exotic tree densities were highest in green areas where larger spaces are considered for greening purposes. Conversely, total, native, and exotic tree species richness were highest in land uses with intermediate levels of urban development (residential, residential-commercial areas. Not finding highest tree species richness in less developed urban areas suggests that cultural factors may shape the array of species that are planted within cities. Supporting this, tree composition analyses showed that green areas are comprised of different tree species when compared to the rest of the studied urban land uses. Thus, our results suggest that, to increase the ecological quality of cities, residents and managers should be encouraged to select a greater variety of trees to promote heterogeneous green areas.

  17. A parallel buffer tree

    DEFF Research Database (Denmark)

    Sitchinava, Nodar; Zeh, Norbert


    We present the parallel buffer tree, a parallel external memory (PEM) data structure for batched search problems. This data structure is a non-trivial extension of Arge's sequential buffer tree to a private-cache multiprocessor environment and reduces the number of I/O operations by the number of...... in the optimal OhOf(psortN + K/PB) parallel I/O complexity, where K is the size of the output reported in the process and psortN is the parallel I/O complexity of sorting N elements using P processors....

  18. The regenerated tail of juvenile leopard geckos (Gekkota: Eublepharidae: Eublepharis macularius) preferentially stores more fat than the original. (United States)

    Russell, Anthony P; Lynn, Sabrina E; Powell, G Lawrence; Cottle, Andrew


    The tail of many species of lizard is used as a site of fat storage, and caudal autotomy is a widespread phenomenon among lizards. This means that caudal fat stores are at risk of being lost if the tail is autotomized. For fat-tailed species, such as the leopard gecko, this may be particularly costly. Previous work has shown that tail regeneration in juveniles of this species is rapid and that it receives priority for energy allocation, even when dietary resources are markedly reduced. We found that the regenerated tails of juvenile leopard geckos are more massive than their original counterparts, regardless of dietary intake, and that they exhibit greater amounts of skeleton, inner fat, muscle and subcutaneous fat than original tails (as assessed through cross-sectional area measurements of positionally equivalent stations along the tail). Autotomy and regeneration result in changes in tail shape, mass and the pattern of tissue distribution within the tail. The regenerated tail exhibits enhanced fat storage capacity, even in the face of a diet that results in significant slowing of body growth. Body growth is thus sacrificed at the expense of rapid tail growth. Fat stores laid down rapidly in the regenerating tail may later be used to fuel body growth or reproductive investment. The regenerated tail thus seems to have adaptive roles of its own, and provides a potential vehicle for studying trade-offs that relate to life history strategy. Copyright © 2015 Elsevier GmbH. All rights reserved.

  19. [Fitness of sexual reproduction of Toona ciliata var. pubescens natural populations and their sexual reproduction and regeneration]. (United States)

    Huang, Hong Lan; Zhang, Lu; Jia, Li Ming; Liang, Yue-Long; Cai, Jun Huo


    To examine the reproduction fitness coefficients and individual-level fitness of Toona ciliata var. pubescens, their sexual reproduction and natural regeneration were investigated during 2006-2016, with four natural populations in Jiulianshan National Reserve as test objects. The results showed that there were only 2-10 trees for the natural populations of T. ciliata var. pubescens with a small initial number of fruiting plants (3-9 trees), which were from the initial fruiting plants or their first/second generation. The sexual reproduction of these isolated populations were significantly different, and their seed production capacities tended to decline over time. With the maturing of communities, soil seed banks and seed germinations were extremely poor, and the number of trees that could be growing to mature stage was nearly zero. The optimum maturity age of T. ciliata var. pubescens was about 40 a, and the fitness coefficients (2.0-2.8) rapidly increased in early development stage, but then was sharply reduced (0.3-0.5), and then gradually dropped to almost 0. There were significant differences in the fitness at individual level (0-14 tree·cm -2 ) among different populations, but their values were low (close to zero). Based on the existing reproduction rate, the actual values of sexual reproduction and regeneration fitness were much lower than the predicted ones. Due to the low level of genetic fitness, the sexual reproductive ability of different populations all showed decreasing trends. The natural sexual regeneration ability tended to decline, while the fitness of T. ciliata var. pubescens further decreased. All those factors suggested higher investment risks. Therefore, the systems of sexual reproduction became unbalanced and deteriorating. We proposed that more studies, including breeding mating, pollination, seed setting, and genetic diversity evaluation, are needed. Moreover, we should provide suitable forest environment through cleaning up litter in the

  20. The influence of regeneration fellings on the development of artificially regenerated beech (Fagus sylvatica L.) plantations

    Czech Academy of Sciences Publication Activity Database

    Bednář, Pavel; Černý, J.


    Roč. 62, č. 5 (2014), s. 859-867 ISSN 1211-8516 Institutional support: RVO:67179843 Keywords : European beech * regeneration felling * artificial regeneration * height * DBH – the diameter at breast-height * quality * ISF – Indirect Site Factor Subject RIV: GK - Forestry

  1. Functional hepatocellular regeneration measured by hepatobiliary scintigraphy, functional regeneration or functional hepatocytes?

    NARCIS (Netherlands)

    Olthof, Pim B.; Cieslak, Kasia P.; Bennink, Roelof J.; van Gulik, Thomas M.


    In a recent issue of this journal, Fernandes et al(1) reported on functional hepatocellular regeneration in elderly patients undergoing hepatectomy. They used (99m) Tc-mebrofinin HBS to quantify liver function before and after surgery and concluded that functional regeneration is already present at

  2. Shape-changing interfaces:

    DEFF Research Database (Denmark)

    Rasmussen, Majken Kirkegård; Pedersen, Esben Warming; Petersen, Marianne Graves


    Shape change is increasingly used in physical user interfaces, both as input and output. Yet, the progress made and the key research questions for shape-changing interfaces are rarely analyzed systematically. We review a sample of existing work on shape-changing interfaces to address these shortc......Shape change is increasingly used in physical user interfaces, both as input and output. Yet, the progress made and the key research questions for shape-changing interfaces are rarely analyzed systematically. We review a sample of existing work on shape-changing interfaces to address...... these shortcomings. We identify eight types of shape that are transformed in various ways to serve both functional and hedonic design purposes. Interaction with shape-changing interfaces is simple and rarely merges input and output. Three questions are discussed based on the review: (a) which design purposes may...

  3. Self-erecting shapes (United States)

    Reading, Matthew W.


    Technologies for making self-erecting structures are described herein. An exemplary self-erecting structure comprises a plurality of shape-memory members that connect two or more hub components. When forces are applied to the self-erecting structure, the shape-memory members can deform, and when the forces are removed the shape-memory members can return to their original pre-deformation shape, allowing the self-erecting structure to return to its own original shape under its own power. A shape of the self-erecting structure depends on a spatial orientation of the hub components, and a relative orientation of the shape-memory members, which in turn depends on an orientation of joining of the shape-memory members with the hub components.

  4. Applications of Metals for Bone Regeneration

    Directory of Open Access Journals (Sweden)

    Kristina Glenske


    Full Text Available The regeneration of bone tissue is the main purpose of most therapies in dental medicine. For bone regeneration, calcium phosphate (CaP-based substitute materials based on natural (allo- and xenografts and synthetic origins (alloplastic materials are applied for guiding the regeneration processes. The optimal bone substitute has to act as a substrate for bone ingrowth into a defect, as well as resorb in the time frame needed for complete regeneration up to the condition of restitution ad integrum. In this context, the modes of action of CaP-based substitute materials have been frequently investigated, where it has been shown that such materials strongly influence regenerative processes such as osteoblast growth or differentiation and also osteoclastic resorption due to different physicochemical properties of the materials. However, the material characteristics needed for the required ratio between new bone tissue formation and material degradation has not been found, until now. The addition of different substances such as collagen or growth factors and also of different cell types has already been tested but did not allow for sufficient or prompt application. Moreover, metals or metal ions are used differently as a basis or as supplement for different materials in the field of bone regeneration. Moreover, it has already been shown that different metal ions are integral components of bone tissue, playing functional roles in the physiological cellular environment as well as in the course of bone healing. The present review focuses on frequently used metals as integral parts of materials designed for bone regeneration, with the aim to provide an overview of currently existing knowledge about the effects of metals in the field of bone regeneration.

  5. Mechanisms of lymphatic regeneration after tissue transfer.

    Directory of Open Access Journals (Sweden)

    Alan Yan


    Full Text Available Lymphedema is the chronic swelling of an extremity that occurs commonly after lymph node resection for cancer treatment. Recent studies have demonstrated that transfer of healthy tissues can be used as a means of bypassing damaged lymphatics and ameliorating lymphedema. The purpose of these studies was to investigate the mechanisms that regulate lymphatic regeneration after tissue transfer.Nude mice (recipients underwent 2-mm tail skin excisions that were either left open or repaired with full-thickness skin grafts harvested from donor transgenic mice that expressed green fluorescent protein in all tissues or from LYVE-1 knockout mice. Lymphatic regeneration, expression of VEGF-C, macrophage infiltration, and potential for skin grafting to bypass damaged lymphatics were assessed.Skin grafts healed rapidly and restored lymphatic flow. Lymphatic regeneration occurred beginning at the peripheral edges of the graft, primarily from ingrowth of new lymphatic vessels originating from the recipient mouse. In addition, donor lymphatic vessels appeared to spontaneously re-anastomose with recipient vessels. Patterns of VEGF-C expression and macrophage infiltration were temporally and spatially associated with lymphatic regeneration. When compared to mice treated with excision only, there was a 4-fold decrease in tail volumes, 2.5-fold increase in lymphatic transport by lymphoscintigraphy, 40% decrease in dermal thickness, and 54% decrease in scar index in skin-grafted animals, indicating that tissue transfer could bypass damaged lymphatics and promote rapid lymphatic regeneration.Our studies suggest that lymphatic regeneration after tissue transfer occurs by ingrowth of lymphatic vessels and spontaneous re-connection of existing lymphatics. This process is temporally and spatially associated with VEGF-C expression and macrophage infiltration. Finally, tissue transfer can be used to bypass damaged lymphatics and promote rapid lymphatic regeneration.

  6. Patterns and Drivers of Tree Mortality in Iberian Forests: Climatic Effects Are Modified by Competition (United States)

    Ruiz-Benito, Paloma; Lines, Emily R.; Gómez-Aparicio, Lorena; Zavala, Miguel A.; Coomes, David A.


    Tree mortality is a key process underlying forest dynamics and community assembly. Understanding how tree mortality is driven by simultaneous drivers is needed to evaluate potential effects of climate change on forest composition. Using repeat-measure information from c. 400,000 trees from the Spanish Forest Inventory, we quantified the relative importance of tree size, competition, climate and edaphic conditions on tree mortality of 11 species, and explored the combined effect of climate and competition. Tree mortality was affected by all of these multiple drivers, especially tree size and asymmetric competition, and strong interactions between climate and competition were found. All species showed L-shaped mortality patterns (i.e. showed decreasing mortality with tree size), but pines were more sensitive to asymmetric competition than broadleaved species. Among climatic variables, the negative effect of temperature on tree mortality was much larger than the effect of precipitation. Moreover, the effect of climate (mean annual temperature and annual precipitation) on tree mortality was aggravated at high competition levels for all species, but especially for broadleaved species. The significant interaction between climate and competition on tree mortality indicated that global change in Mediterranean regions, causing hotter and drier conditions and denser stands, could lead to profound effects on forest structure and composition. Therefore, to evaluate the potential effects of climatic change on tree mortality, forest structure must be considered, since two systems of similar composition but different structure could radically differ in their response to climatic conditions. PMID:23451096

  7. 3D Tree Dimensionality Assessment Using Photogrammetry and Small Unmanned Aerial Vehicles. (United States)

    Gatziolis, Demetrios; Lienard, Jean F; Vogs, Andre; Strigul, Nikolay S


    Detailed, precise, three-dimensional (3D) representations of individual trees are a prerequisite for an accurate assessment of tree competition, growth, and morphological plasticity. Until recently, our ability to measure the dimensionality, spatial arrangement, shape of trees, and shape of tree components with precision has been constrained by technological and logistical limitations and cost. Traditional methods of forest biometrics provide only partial measurements and are labor intensive. Active remote technologies such as LiDAR operated from airborne platforms provide only partial crown reconstructions. The use of terrestrial LiDAR is laborious, has portability limitations and high cost. In this work we capitalized on recent improvements in the capabilities and availability of small unmanned aerial vehicles (UAVs), light and inexpensive cameras, and developed an affordable method for obtaining precise and comprehensive 3D models of trees and small groups of trees. The method employs slow-moving UAVs that acquire images along predefined trajectories near and around targeted trees, and computer vision-based approaches that process the images to obtain detailed tree reconstructions. After we confirmed the potential of the methodology via simulation we evaluated several UAV platforms, strategies for image acquisition, and image processing algorithms. We present an original, step-by-step workflow which utilizes open source programs and original software. We anticipate that future development and applications of our method will improve our understanding of forest self-organization emerging from the competition among trees, and will lead to a refined generation of individual-tree-based forest models.

  8. Universal artifacts affect the branching of phylogenetic trees, not universal scaling laws. (United States)

    Altaba, Cristian R


    The superficial resemblance of phylogenetic trees to other branching structures allows searching for macroevolutionary patterns. However, such trees are just statistical inferences of particular historical events. Recent meta-analyses report finding regularities in the branching pattern of phylogenetic trees. But is this supported by evidence, or are such regularities just methodological artifacts? If so, is there any signal in a phylogeny? In order to evaluate the impact of polytomies and imbalance on tree shape, the distribution of all binary and polytomic trees of up to 7 taxa was assessed in tree-shape space. The relationship between the proportion of outgroups and the amount of imbalance introduced with them was assessed applying four different tree-building methods to 100 combinations from a set of 10 ingroup and 9 outgroup species, and performing covariance analyses. The relevance of this analysis was explored taking 61 published phylogenies, based on nucleic acid sequences and involving various taxa, taxonomic levels, and tree-building methods. All methods of phylogenetic inference are quite sensitive to the artifacts introduced by outgroups. However, published phylogenies appear to be subject to a rather effective, albeit rather intuitive control against such artifacts. The data and methods used to build phylogenetic trees are varied, so any meta-analysis is subject to pitfalls due to their uneven intrinsic merits, which translate into artifacts in tree shape. The binary branching pattern is an imposition of methods, and seldom reflects true relationships in intraspecific analyses, yielding artifactual polytomies in short trees. Above the species level, the departure of real trees from simplistic random models is caused at least by two natural factors--uneven speciation and extinction rates; and artifacts such as choice of taxa included in the analysis, and imbalance introduced by outgroups and basal paraphyletic taxa. This artifactual imbalance accounts

  9. Effects of Drought, Pest Pressure and Light Availability on Seedling Establishment and Growth: Their Role for Distribution of Tree Species across a Tropical Rainfall Gradient (United States)

    Gaviria, Julian; Engelbrecht, Bettina M. J.


    Tree species distributions associated with rainfall are among the most prominent patterns in tropical forests. Understanding the mechanisms shaping these patterns is important to project impacts of global climate change on tree distributions and diversity in the tropics. Beside direct effects of water availability, additional factors co-varying with rainfall have been hypothesized to play an important role, including pest pressure and light availability. While low water availability is expected to exclude drought-intolerant wet forest species from drier forests (physiological tolerance hypothesis), high pest pressure or low light availability are hypothesized to exclude dry forest species from wetter forests (pest pressure gradient and light availability hypothesis, respectively). To test these hypotheses at the seed-to-seedling transition, the potentially most critical stage for species discrimination, we conducted a reciprocal transplant experiment combined with a pest exclosure treatment at a wet and a dry forest site in Panama with seeds of 26 species with contrasting origin. Establishment success after one year did not reflect species distribution patterns. However, in the wet forest, wet origin species had a home advantage over dry forest species through higher growth rates. At the same time, drought limited survival of wet origin species in the dry forest, supporting the physiological tolerance hypothesis. Together these processes sort species over longer time frames, and exclude species outside their respective home range. Although we found pronounced effects of pests and some effects of light availability on the seedlings, they did not corroborate the pest pressure nor light availability hypotheses at the seed-to-seedling transition. Our results underline that changes in water availability due to climate change will have direct consequences on tree regeneration and distributions along tropical rainfall gradients, while indirect effects of light and pests

  10. Effect of plant growth regulators and genotype on the micropropagation of adult trees of Arbutus unedo L. (strawberry tree). (United States)

    Gomes, Filomena; Simões, Mafalda; Lopes, Maria L; Canhoto, Jorge M


    Arbutus unedo grows spontaneously around the Mediterranean basin. The species is tolerant to drought and has a strong regeneration capacity following fires making it interesting for Mediterranean forestation programs. Considering the sparse information about the potential of this fruit tree to be propagated in vitro, a project to clone selected trees based on their fruit production was initiated a few years ago. The role of several factors on A. unedo propagation was evaluated. The results showed that 8.9 μm kinetin gave the best results although not significantly different from those obtained with benzyladenine or zeatin. The inclusion of thidiazuron or 1-naphthaleneacetic acid promoted callus growth and had deleterious effects on the multiplication rate. The genotype of the donor plants is also a factor interfering with the multiplication. The results also indicated that the conditions used for multiplication influenced the behavior of shoots during the rooting phase. Copyright © 2010 Elsevier B.V. All rights reserved.

  11. Lens regeneration in axolotl: new evidence of developmental plasticity

    Directory of Open Access Journals (Sweden)

    Suetsugu-Maki Rinako


    Full Text Available Abstract Background Among vertebrates lens regeneration is most pronounced in newts, which have the ability to regenerate the entire lens throughout their lives. Regeneration occurs from the dorsal iris by transdifferentiation of the pigment epithelial cells. Interestingly, the ventral iris never contributes to regeneration. Frogs have limited lens regeneration capacity elicited from the cornea during pre-metamorphic stages. The axolotl is another salamander which, like the newt, regenerates its limbs or its tail with the spinal cord, but up until now all reports have shown that it does not regenerate the lens. Results Here we present a detailed analysis during different stages of axolotl development, and we show that despite previous beliefs the axolotl does regenerate the lens, however, only during a limited time after hatching. We have found that starting at stage 44 (forelimb bud stage lens regeneration is possible for nearly two weeks. Regeneration occurs from the iris but, in contrast to the newt, regeneration can be elicited from either the dorsal or the ventral iris and, occasionally, even from both in the same eye. Similar studies in the zebra fish concluded that lens regeneration is not possible. Conclusions Regeneration of the lens is possible in the axolotl, but differs from both frogs and newts. Thus the axolotl iris provides a novel and more plastic strategy for lens regeneration.

  12. The Hue of Shapes (United States)

    Albertazzi, Liliana; Da Pos, Osvaldo; Canal, Luisa; Micciolo, Rocco; Malfatti, Michela; Vescovi, Massimo


    This article presents an experimental study on the naturally biased association between shape and color. For each basic geometric shape studied, participants were asked to indicate the color perceived as most closely related to it, choosing from the Natural Color System Hue Circle. Results show that the choices of color for each shape were not…

  13. Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient. (United States)

    Orihuela, Rodrigo L L; Peres, Carlos A; Mendes, Gabriel; Jarenkow, João A; Tabarelli, Marcelo


    We examine the effects of forest fragmentation on the structure and composition of tree assemblages within three seasonal and aseasonal forest types of southern Brazil, including evergreen, Araucaria, and deciduous forests. We sampled three southernmost Atlantic Forest landscapes, including the largest continuous forest protected areas within each forest type. Tree assemblages in each forest type were sampled within 10 plots of 0.1 ha in both continuous forests and 10 adjacent forest fragments. All trees within each plot were assigned to trait categories describing their regeneration strategy, vertical stratification, seed-dispersal mode, seed size, and wood density. We detected differences among both forest types and landscape contexts in terms of overall tree species richness, and the density and species richness of different functional groups in terms of regeneration strategy, seed dispersal mode and woody density. Overall, evergreen forest fragments exhibited the largest deviations from continuous forest plots in assemblage structure. Evergreen, Araucaria and deciduous forests diverge in the functional composition of tree floras, particularly in relation to regeneration strategy and stress tolerance. By supporting a more diversified light-demanding and stress-tolerant flora with reduced richness and abundance of shade-tolerant, old-growth species, both deciduous and Araucaria forest tree assemblages are more intrinsically resilient to contemporary human-disturbances, including fragmentation-induced edge effects, in terms of species erosion and functional shifts. We suggest that these intrinsic differences in the direction and magnitude of responses to changes in landscape structure between forest types should guide a wide range of conservation strategies in restoring fragmented tropical forest landscapes worldwide.

  14. Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient.

    Directory of Open Access Journals (Sweden)

    Rodrigo L L Orihuela

    Full Text Available We examine the effects of forest fragmentation on the structure and composition of tree assemblages within three seasonal and aseasonal forest types of southern Brazil, including evergreen, Araucaria, and deciduous forests. We sampled three southernmost Atlantic Forest landscapes, including the largest continuous forest protected areas within each forest type. Tree assemblages in each forest type were sampled within 10 plots of 0.1 ha in both continuous forests and 10 adjacent forest fragments. All trees within each plot were assigned to trait categories describing their regeneration strategy, vertical stratification, seed-dispersal mode, seed size, and wood density. We detected differences among both forest types and landscape contexts in terms of overall tree species richness, and the density and species richness of different functional groups in terms of regeneration strategy, seed dispersal mode and woody density. Overall, evergreen forest fragments exhibited the largest deviations from continuous forest plots in assemblage structure. Evergreen, Araucaria and deciduous forests diverge in the functional composition of tree floras, particularly in relation to regeneration strategy and stress tolerance. By supporting a more diversified light-demanding and stress-tolerant flora with reduced richness and abundance of shade-tolerant, old-growth species, both deciduous and Araucaria forest tree assemblages are more intrinsically resilient to contemporary human-disturbances, including fragmentation-induced edge effects, in terms of species erosion and functional shifts. We suggest that these intrinsic differences in the direction and magnitude of responses to changes in landscape structure between forest types should guide a wide range of conservation strategies in restoring fragmented tropical forest landscapes worldwide.

  15. Coastal Plain Soil Fertility Degradation And Natural Forest Ecosystem Regeneration (United States)

    Casagrande, J. C.; Sato, C. A.; Reis-Duarte, R. M.; Soares, M. R.; Galvão Bueno, M. S.


    The sand coastal plain vegetation (Restinga Forest) has been described as an ecosystem associated with the Atlantic Forest, constituted of mosaics, which occur in areas of great ecological diversity, particularly the features of the soil which mostly influence the forest, therefore assigned as edaphic community. The Restinga forest is one of the most fragile, showing low resilience to human damage This work was carried out in several points (14) of Restinga Forest (six low - trees from 3 to 10 m high - and eight high forest - trees from 10 to 15 m high) in the litoral coast of the state of São Paulo. Each sample was made of 15 subsamples of each area collected in each depth (one in 0 - 5, 5 - 10, 10 - 15, 15 - 20, and another in 0 - 20, 20 - 40, 40 and 60 cm). Soil characteristics analyzed were pH, P, Na, K, Ca, Mg, S, H + Al, Al, B, Cu, Fe, Mn, Zn contents and base saturation, cation exchange capacity and aluminum saturation. The vegetation physiognomies of Restinga forest (low and high) were associated with soil results and with the history of human occupation. The soils are sandy (2 to 4% of clay), resulting in a low capacity of nutrient retention. Soil fertility analysis to low and high Restinga forest were similar and showed very low contents of phosphorous, calcium and magnesium in all areas investigated. The base saturation was low due to low amounts of Na, K, Ca and Mg. Base saturation presents low level in all cases, less than 10, indicating low nutritional reserve in the soil. The aluminum saturation values varied from 58 to 69%. The level of calcium and magnesium were low in the subsurface soil layer mainly, associate with high aluminum saturation, representing an limiting factor for the root system development in depth. If soil fertility parameters do not show any significant difference between low and high Restinga physiognomy, what make distinction is the recuperation time. In the areas of high Forest can be note a too long time of recuperation

  16. Embedding complete ternary tree in hypercubes using AVL trees

    NARCIS (Netherlands)

    S.A. Choudum; I. Raman (Indhumathi)


    htmlabstractA complete ternary tree is a tree in which every non-leaf vertex has exactly three children. We prove that a complete ternary tree of height h, TTh, is embeddable in a hypercube of dimension . This result coincides with the result of [2]. However, in this paper, the embedding utilizes

  17. Biological regeneration of para-nitrophenol loaded activated carbon

    International Nuclear Information System (INIS)

    Durrani, M.A.Q.; Martin, R.J.


    Biological regeneration is one of several methods that may be used to restore the adsorptive capacity of exhausted granular activated carbon (GAC). This study deals with in-situ biological regeneration on a pilot scale. The principal objective of this research was to ascertain whether biological regeneration of GAC could occur under conditions typical of water treatment. The important parameters which may have the greatest impact on bio regeneration of a given adsorbate were studied. The research investigated the extent of bio regeneration for para-nitrophenol (PNP) of concentration 50 mg/L. Bio regeneration in the total exhaustion system was evaluated in terms of regeneration efficiency and the substrate removal. A three mode procedure was followed for each bio regeneration run. The prepared carbon was initially exhausted with an adsorbate; it was then bio regenerated for para-nitrophenol (PNP) of concentration 50 mg/L. Bio regeneration in he total exhaustion system was evaluated in terms of regeneration efficiency and the substrate removal. A three mode procedure was followed for each bio regeneration run. The prepared carbon was initially exhausted with an adsorbate; it was then bio regenerated with a mixed culture of bacteria, and lastly the carbon was re-saturated. In the totally exhausted GAC system, the bio regeneration was enhanced by increasing the during of regeneration for a fixed initial biomass content of the bioreactor. The bio regeneration efficiency of the totally exhausted (with PNP) GAC the empty bed contact time (EBCT) and the initial concentration of the substrate had a profound effect on the bio regeneration efficiency. Bacterial counts in the effluents of regenerated GAC columns were significantly more than those of fresh carbon effluents. (author)

  18. Portraits of Tree Families

    NARCIS (Netherlands)

    Balgooy, van M.M.J.


    With the publication of the second volume of the series ‘Malesian Seed Plants’, entitled ‘Portraits of Tree Families’, I would like to refer to the Introduction of the first volume, ‘Spot-characters’ for a historical background and an explanation of the aims of this series. The present book treats

  19. P{owering 'Trees

    Indian Academy of Sciences (India)

    Melia dubia Cav. of Meliaceae is a large deciduous tree. Leaves are compound with toothed leaflets. Flowers are small, greenish-yellow in much-branched inflorescences. Fruits are green, ellipsoidal with a single seed covered by hard portion ( as in a mango fruit) and surrounded by fleshy pulp outside. The bark is bitter ...

  20. Programming macro tree transducers

    DEFF Research Database (Denmark)

    Bahr, Patrick; Day, Laurence E.


    transducers can be concisely represented in Haskell, and demonstrate the benefits of utilising such an approach with a number of examples. In particular, tree transducers afford a modular programming style as they can be easily composed and manipulated. Our Haskell representation generalises the original...