Selection vector filter framework

Science.gov (United States)

Lukac, Rastislav; Plataniotis, Konstantinos N.; Smolka, Bogdan; Venetsanopoulos, Anastasios N.

2003-10-01

We provide a unified framework of nonlinear vector techniques outputting the lowest ranked vector. The proposed framework constitutes a generalized filter class for multichannel signal processing. A new class of nonlinear selection filters are based on the robust order-statistic theory and the minimization of the weighted distance function to other input samples. The proposed method can be designed to perform a variety of filtering operations including previously developed filtering techniques such as vector median, basic vector directional filter, directional distance filter, weighted vector median filters and weighted directional filters. A wide range of filtering operations is guaranteed by the filter structure with two independent weight vectors for angular and distance domains of the vector space. In order to adapt the filter parameters to varying signal and noise statistics, we provide also the generalized optimization algorithms taking the advantage of the weighted median filters and the relationship between standard median filter and vector median filter. Thus, we can deal with both statistical and deterministic aspects of the filter design process. It will be shown that the proposed method holds the required properties such as the capability of modelling the underlying system in the application at hand, the robustness with respect to errors in the model of underlying system, the availability of the training procedure and finally, the simplicity of filter representation, analysis, design and implementation. Simulation studies also indicate that the new filters are computationally attractive and have excellent performance in environments corrupted by bit errors and impulsive noise.

Classification of Motor Imagery EEG Signals with Support Vector Machines and Particle Swarm Optimization

Science.gov (United States)

Ma, Yuliang; Ding, Xiaohui; She, Qingshan; Luo, Zhizeng; Potter, Thomas; Zhang, Yingchun

2016-01-01

Support vector machines are powerful tools used to solve the small sample and nonlinear classification problems, but their ultimate classification performance depends heavily upon the selection of appropriate kernel and penalty parameters. In this study, we propose using a particle swarm optimization algorithm to optimize the selection of both the kernel and penalty parameters in order to improve the classification performance of support vector machines. The performance of the optimized classifier was evaluated with motor imagery EEG signals in terms of both classification and prediction. Results show that the optimized classifier can significantly improve the classification accuracy of motor imagery EEG signals. PMID:27313656

Hybridization between multi-objective genetic algorithm and support vector machine for feature selection in walker-assisted gait.

Science.gov (United States)

Martins, Maria; Costa, Lino; Frizera, Anselmo; Ceres, Ramón; Santos, Cristina

2014-03-01

Walker devices are often prescribed incorrectly to patients, leading to the increase of dissatisfaction and occurrence of several problems, such as, discomfort and pain. Thus, it is necessary to objectively evaluate the effects that assisted gait can have on the gait patterns of walker users, comparatively to a non-assisted gait. A gait analysis, focusing on spatiotemporal and kinematics parameters, will be issued for this purpose. However, gait analysis yields redundant information that often is difficult to interpret. This study addresses the problem of selecting the most relevant gait features required to differentiate between assisted and non-assisted gait. For that purpose, it is presented an efficient approach that combines evolutionary techniques, based on genetic algorithms, and support vector machine algorithms, to discriminate differences between assisted and non-assisted gait with a walker with forearm supports. For comparison purposes, other classification algorithms are verified. Results with healthy subjects show that the main differences are characterized by balance and joints excursion in the sagittal plane. These results, confirmed by clinical evidence, allow concluding that this technique is an efficient feature selection approach. Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

The Short-Term Power Load Forecasting Based on Sperm Whale Algorithm and Wavelet Least Square Support Vector Machine with DWT-IR for Feature Selection

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Jin-peng Liu

2017-07-01

Full Text Available Short-term power load forecasting is an important basis for the operation of integrated energy system, and the accuracy of load forecasting directly affects the economy of system operation. To improve the forecasting accuracy, this paper proposes a load forecasting system based on wavelet least square support vector machine and sperm whale algorithm. Firstly, the methods of discrete wavelet transform and inconsistency rate model (DWT-IR are used to select the optimal features, which aims to reduce the redundancy of input vectors. Secondly, the kernel function of least square support vector machine LSSVM is replaced by wavelet kernel function for improving the nonlinear mapping ability of LSSVM. Lastly, the parameters of W-LSSVM are optimized by sperm whale algorithm, and the short-term load forecasting method of W-LSSVM-SWA is established. Additionally, the example verification results show that the proposed model outperforms other alternative methods and has a strong effectiveness and feasibility in short-term power load forecasting.

Deep Support Vector Machines for Regression Problems

NARCIS (Netherlands)

Wiering, Marco; Schutten, Marten; Millea, Adrian; Meijster, Arnold; Schomaker, Lambertus

2013-01-01

In this paper we describe a novel extension of the support vector machine, called the deep support vector machine (DSVM). The original SVM has a single layer with kernel functions and is therefore a shallow model. The DSVM can use an arbitrary number of layers, in which lower-level layers contain

Support Vector Feature Selection for Early Detection of Anastomosis Leakage From Bag-of-Words in Electronic Health Records.

Science.gov (United States)

Soguero-Ruiz, Cristina; Hindberg, Kristian; Rojo-Alvarez, Jose Luis; Skrovseth, Stein Olav; Godtliebsen, Fred; Mortensen, Kim; Revhaug, Arthur; Lindsetmo, Rolv-Ole; Augestad, Knut Magne; Jenssen, Robert

2016-09-01

The free text in electronic health records (EHRs) conveys a huge amount of clinical information about health state and patient history. Despite a rapidly growing literature on the use of machine learning techniques for extracting this information, little effort has been invested toward feature selection and the features' corresponding medical interpretation. In this study, we focus on the task of early detection of anastomosis leakage (AL), a severe complication after elective surgery for colorectal cancer (CRC) surgery, using free text extracted from EHRs. We use a bag-of-words model to investigate the potential for feature selection strategies. The purpose is earlier detection of AL and prediction of AL with data generated in the EHR before the actual complication occur. Due to the high dimensionality of the data, we derive feature selection strategies using the robust support vector machine linear maximum margin classifier, by investigating: 1) a simple statistical criterion (leave-one-out-based test); 2) an intensive-computation statistical criterion (Bootstrap resampling); and 3) an advanced statistical criterion (kernel entropy). Results reveal a discriminatory power for early detection of complications after CRC (sensitivity 100%; specificity 72%). These results can be used to develop prediction models, based on EHR data, that can support surgeons and patients in the preoperative decision making phase.

Single Directional SMO Algorithm for Least Squares Support Vector Machines

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Xigao Shao

2013-01-01

Full Text Available Working set selection is a major step in decomposition methods for training least squares support vector machines (LS-SVMs. In this paper, a new technique for the selection of working set in sequential minimal optimization- (SMO- type decomposition methods is proposed. By the new method, we can select a single direction to achieve the convergence of the optimality condition. A simple asymptotic convergence proof for the new algorithm is given. Experimental comparisons demonstrate that the classification accuracy of the new method is not largely different from the existing methods, but the training speed is faster than existing ones.

Generalized Selection Weighted Vector Filters

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Rastislav Lukac

2004-09-01

Full Text Available This paper introduces a class of nonlinear multichannel filters capable of removing impulsive noise in color images. The here-proposed generalized selection weighted vector filter class constitutes a powerful filtering framework for multichannel signal processing. Previously defined multichannel filters such as vector median filter, basic vector directional filter, directional-distance filter, weighted vector median filters, and weighted vector directional filters are treated from a global viewpoint using the proposed framework. Robust order-statistic concepts and increased degree of freedom in filter design make the proposed method attractive for a variety of applications. Introduced multichannel sigmoidal adaptation of the filter parameters and its modifications allow to accommodate the filter parameters to varying signal and noise statistics. Simulation studies reported in this paper indicate that the proposed filter class is computationally attractive, yields excellent performance, and is able to preserve fine details and color information while efficiently suppressing impulsive noise. This paper is an extended version of the paper by Lukac et al. presented at the 2003 IEEE-EURASIP Workshop on Nonlinear Signal and Image Processing (NSIP '03 in Grado, Italy.

A novel selection method of seismic attributes based on gray relational degree and support vector machine.

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Yaping Huang

Full Text Available The selection of seismic attributes is a key process in reservoir prediction because the prediction accuracy relies on the reliability and credibility of the seismic attributes. However, effective selection method for useful seismic attributes is still a challenge. This paper presents a novel selection method of seismic attributes for reservoir prediction based on the gray relational degree (GRD and support vector machine (SVM. The proposed method has a two-hierarchical structure. In the first hierarchy, the primary selection of seismic attributes is achieved by calculating the GRD between seismic attributes and reservoir parameters, and the GRD between the seismic attributes. The principle of the primary selection is that these seismic attributes with higher GRD to the reservoir parameters will have smaller GRD between themselves as compared to those with lower GRD to the reservoir parameters. Then the SVM is employed in the second hierarchy to perform an interactive error verification using training samples for the purpose of determining the final seismic attributes. A real-world case study was conducted to evaluate the proposed GRD-SVM method. Reliable seismic attributes were selected to predict the coalbed methane (CBM content in southern Qinshui basin, China. In the analysis, the instantaneous amplitude, instantaneous bandwidth, instantaneous frequency, and minimum negative curvature were selected, and the predicted CBM content was fundamentally consistent with the measured CBM content. This real-world case study demonstrates that the proposed method is able to effectively select seismic attributes, and improve the prediction accuracy. Thus, the proposed GRD-SVM method can be used for the selection of seismic attributes in practice.

On Weighted Support Vector Regression

DEFF Research Database (Denmark)

Han, Xixuan; Clemmensen, Line Katrine Harder

2014-01-01

We propose a new type of weighted support vector regression (SVR), motivated by modeling local dependencies in time and space in prediction of house prices. The classic weights of the weighted SVR are added to the slack variables in the objective function (OF‐weights). This procedure directly...... shrinks the coefficient of each observation in the estimated functions; thus, it is widely used for minimizing influence of outliers. We propose to additionally add weights to the slack variables in the constraints (CF‐weights) and call the combination of weights the doubly weighted SVR. We illustrate...... the differences and similarities of the two types of weights by demonstrating the connection between the Least Absolute Shrinkage and Selection Operator (LASSO) and the SVR. We show that an SVR problem can be transformed to a LASSO problem plus a linear constraint and a box constraint. We demonstrate...

Feature Selection and Parameter Optimization of Support Vector Machines Based on Modified Artificial Fish Swarm Algorithms

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Kuan-Cheng Lin

2015-01-01

Full Text Available Rapid advances in information and communication technology have made ubiquitous computing and the Internet of Things popular and practicable. These applications create enormous volumes of data, which are available for analysis and classification as an aid to decision-making. Among the classification methods used to deal with big data, feature selection has proven particularly effective. One common approach involves searching through a subset of the features that are the most relevant to the topic or represent the most accurate description of the dataset. Unfortunately, searching through this kind of subset is a combinatorial problem that can be very time consuming. Meaheuristic algorithms are commonly used to facilitate the selection of features. The artificial fish swarm algorithm (AFSA employs the intelligence underlying fish swarming behavior as a means to overcome optimization of combinatorial problems. AFSA has proven highly successful in a diversity of applications; however, there remain shortcomings, such as the likelihood of falling into a local optimum and a lack of multiplicity. This study proposes a modified AFSA (MAFSA to improve feature selection and parameter optimization for support vector machine classifiers. Experiment results demonstrate the superiority of MAFSA in classification accuracy using subsets with fewer features for given UCI datasets, compared to the original FASA.

Traditional and robust vector selection methods for use with similarity based models

International Nuclear Information System (INIS)

Hines, J. W.; Garvey, D. R.

2006-01-01

Vector selection, or instance selection as it is often called in the data mining literature, performs a critical task in the development of nonparametric, similarity based models. Nonparametric, similarity based modeling (SBM) is a form of 'lazy learning' which constructs a local model 'on the fly' by comparing a query vector to historical, training vectors. For large training sets the creation of local models may become cumbersome, since each training vector must be compared to the query vector. To alleviate this computational burden, varying forms of training vector sampling may be employed with the goal of selecting a subset of the training data such that the samples are representative of the underlying process. This paper describes one such SBM, namely auto-associative kernel regression (AAKR), and presents five traditional vector selection methods and one robust vector selection method that may be used to select prototype vectors from a larger data set in model training. The five traditional vector selection methods considered are min-max, vector ordering, combination min-max and vector ordering, fuzzy c-means clustering, and Adeli-Hung clustering. Each method is described in detail and compared using artificially generated data and data collected from the steam system of an operating nuclear power plant. (authors)

Noise reduction by support vector regression with a Ricker wavelet kernel

International Nuclear Information System (INIS)

Deng, Xiaoying; Yang, Dinghui; Xie, Jing

2009-01-01

We propose a noise filtering technology based on the least-squares support vector regression (LS-SVR), to improve the signal-to-noise ratio (SNR) of seismic data. We modified it by using an admissible support vector (SV) kernel, namely the Ricker wavelet kernel, to replace the conventional radial basis function (RBF) kernel in seismic data processing. We investigated the selection of the regularization parameter for the LS-SVR and derived a concise selecting formula directly from the noisy data. We used the proposed method for choosing the regularization parameter which not only had the advantage of high speed but could also obtain almost the same effectiveness as an optimal parameter method. We conducted experiments using synthetic data corrupted by the random noise of different types and levels, and found that our method was superior to the wavelet transform-based approach and the Wiener filtering. We also applied the method to two field seismic data sets and concluded that it was able to effectively suppress the random noise and improve the data quality in terms of SNR

Noise reduction by support vector regression with a Ricker wavelet kernel

Science.gov (United States)

Deng, Xiaoying; Yang, Dinghui; Xie, Jing

2009-06-01

We propose a noise filtering technology based on the least-squares support vector regression (LS-SVR), to improve the signal-to-noise ratio (SNR) of seismic data. We modified it by using an admissible support vector (SV) kernel, namely the Ricker wavelet kernel, to replace the conventional radial basis function (RBF) kernel in seismic data processing. We investigated the selection of the regularization parameter for the LS-SVR and derived a concise selecting formula directly from the noisy data. We used the proposed method for choosing the regularization parameter which not only had the advantage of high speed but could also obtain almost the same effectiveness as an optimal parameter method. We conducted experiments using synthetic data corrupted by the random noise of different types and levels, and found that our method was superior to the wavelet transform-based approach and the Wiener filtering. We also applied the method to two field seismic data sets and concluded that it was able to effectively suppress the random noise and improve the data quality in terms of SNR.

Filtered selection coupled with support vector machines generate a functionally relevant prediction model for colorectal cancer

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Gabere MN

2016-06-01

Full Text Available Musa Nur Gabere,1 Mohamed Aly Hussein,1 Mohammad Azhar Aziz2 1Department of Bioinformatics, King Abdullah International Medical Research Center/King Saud bin Abdulaziz University for Health Sciences, Riyadh, Saudi Arabia; 2Colorectal Cancer Research Program, Department of Medical Genomics, King Abdullah International Medical Research Center, Riyadh, Saudi Arabia Purpose: There has been considerable interest in using whole-genome expression profiles for the classification of colorectal cancer (CRC. The selection of important features is a crucial step before training a classifier.Methods: In this study, we built a model that uses support vector machine (SVM to classify cancer and normal samples using Affymetrix exon microarray data obtained from 90 samples of 48 patients diagnosed with CRC. From the 22,011 genes, we selected the 20, 30, 50, 100, 200, 300, and 500 genes most relevant to CRC using the minimum-redundancy–maximum-relevance (mRMR technique. With these gene sets, an SVM model was designed using four different kernel types (linear, polynomial, radial basis function [RBF], and sigmoid.Results: The best model, which used 30 genes and RBF kernel, outperformed other combinations; it had an accuracy of 84% for both ten fold and leave-one-out cross validations in discriminating the cancer samples from the normal samples. With this 30 genes set from mRMR, six classifiers were trained using random forest (RF, Bayes net (BN, multilayer perceptron (MLP, naïve Bayes (NB, reduced error pruning tree (REPT, and SVM. Two hybrids, mRMR + SVM and mRMR + BN, were the best models when tested on other datasets, and they achieved a prediction accuracy of 95.27% and 91.99%, respectively, compared to other mRMR hybrid models (mRMR + RF, mRMR + NB, mRMR + REPT, and mRMR + MLP. Ingenuity pathway analysis was used to analyze the functions of the 30 genes selected for this model and their potential association with CRC: CDH3, CEACAM7, CLDN1, IL8, IL6R, MMP1

Comparison of four support-vector based function approximators

NARCIS (Netherlands)

de Kruif, B.J.; de Vries, Theodorus J.A.

2004-01-01

One of the uses of the support vector machine (SVM), as introduced in V.N. Vapnik (2000), is as a function approximator. The SVM and approximators based on it, approximate a relation in data by applying interpolation between so-called support vectors, being a limited number of samples that have been

Support vector machines optimization based theory, algorithms, and extensions

CERN Document Server

Deng, Naiyang; Zhang, Chunhua

2013-01-01

Support Vector Machines: Optimization Based Theory, Algorithms, and Extensions presents an accessible treatment of the two main components of support vector machines (SVMs)-classification problems and regression problems. The book emphasizes the close connection between optimization theory and SVMs since optimization is one of the pillars on which SVMs are built.The authors share insight on many of their research achievements. They give a precise interpretation of statistical leaning theory for C-support vector classification. They also discuss regularized twi

BLProt: Prediction of bioluminescent proteins based on support vector machine and relieff feature selection

KAUST Repository

Kandaswamy, Krishna Kumar

2011-08-17

Background: Bioluminescence is a process in which light is emitted by a living organism. Most creatures that emit light are sea creatures, but some insects, plants, fungi etc, also emit light. The biotechnological application of bioluminescence has become routine and is considered essential for many medical and general technological advances. Identification of bioluminescent proteins is more challenging due to their poor similarity in sequence. So far, no specific method has been reported to identify bioluminescent proteins from primary sequence.Results: In this paper, we propose a novel predictive method that uses a Support Vector Machine (SVM) and physicochemical properties to predict bioluminescent proteins. BLProt was trained using a dataset consisting of 300 bioluminescent proteins and 300 non-bioluminescent proteins, and evaluated by an independent set of 141 bioluminescent proteins and 18202 non-bioluminescent proteins. To identify the most prominent features, we carried out feature selection with three different filter approaches, ReliefF, infogain, and mRMR. We selected five different feature subsets by decreasing the number of features, and the performance of each feature subset was evaluated.Conclusion: BLProt achieves 80% accuracy from training (5 fold cross-validations) and 80.06% accuracy from testing. The performance of BLProt was compared with BLAST and HMM. High prediction accuracy and successful prediction of hypothetical proteins suggests that BLProt can be a useful approach to identify bioluminescent proteins from sequence information, irrespective of their sequence similarity. 2011 Kandaswamy et al; licensee BioMed Central Ltd.

BLProt: Prediction of bioluminescent proteins based on support vector machine and relieff feature selection

KAUST Repository

Kandaswamy, Krishna Kumar; Pugalenthi, Ganesan; Hazrati, Mehrnaz Khodam; Kalies, Kai-Uwe; Martinetz, Thomas

2011-01-01

Background: Bioluminescence is a process in which light is emitted by a living organism. Most creatures that emit light are sea creatures, but some insects, plants, fungi etc, also emit light. The biotechnological application of bioluminescence has become routine and is considered essential for many medical and general technological advances. Identification of bioluminescent proteins is more challenging due to their poor similarity in sequence. So far, no specific method has been reported to identify bioluminescent proteins from primary sequence.Results: In this paper, we propose a novel predictive method that uses a Support Vector Machine (SVM) and physicochemical properties to predict bioluminescent proteins. BLProt was trained using a dataset consisting of 300 bioluminescent proteins and 300 non-bioluminescent proteins, and evaluated by an independent set of 141 bioluminescent proteins and 18202 non-bioluminescent proteins. To identify the most prominent features, we carried out feature selection with three different filter approaches, ReliefF, infogain, and mRMR. We selected five different feature subsets by decreasing the number of features, and the performance of each feature subset was evaluated.Conclusion: BLProt achieves 80% accuracy from training (5 fold cross-validations) and 80.06% accuracy from testing. The performance of BLProt was compared with BLAST and HMM. High prediction accuracy and successful prediction of hypothetical proteins suggests that BLProt can be a useful approach to identify bioluminescent proteins from sequence information, irrespective of their sequence similarity. 2011 Kandaswamy et al; licensee BioMed Central Ltd.

Progressive Classification Using Support Vector Machines

Science.gov (United States)

Wagstaff, Kiri; Kocurek, Michael

2009-01-01

An algorithm for progressive classification of data, analogous to progressive rendering of images, makes it possible to compromise between speed and accuracy. This algorithm uses support vector machines (SVMs) to classify data. An SVM is a machine learning algorithm that builds a mathematical model of the desired classification concept by identifying the critical data points, called support vectors. Coarse approximations to the concept require only a few support vectors, while precise, highly accurate models require far more support vectors. Once the model has been constructed, the SVM can be applied to new observations. The cost of classifying a new observation is proportional to the number of support vectors in the model. When computational resources are limited, an SVM of the appropriate complexity can be produced. However, if the constraints are not known when the model is constructed, or if they can change over time, a method for adaptively responding to the current resource constraints is required. This capability is particularly relevant for spacecraft (or any other real-time systems) that perform onboard data analysis. The new algorithm enables the fast, interactive application of an SVM classifier to a new set of data. The classification process achieved by this algorithm is characterized as progressive because a coarse approximation to the true classification is generated rapidly and thereafter iteratively refined. The algorithm uses two SVMs: (1) a fast, approximate one and (2) slow, highly accurate one. New data are initially classified by the fast SVM, producing a baseline approximate classification. For each classified data point, the algorithm calculates a confidence index that indicates the likelihood that it was classified correctly in the first pass. Next, the data points are sorted by their confidence indices and progressively reclassified by the slower, more accurate SVM, starting with the items most likely to be incorrectly classified. The user

T-wave end detection using neural networks and Support Vector Machines.

Science.gov (United States)

Suárez-León, Alexander Alexeis; Varon, Carolina; Willems, Rik; Van Huffel, Sabine; Vázquez-Seisdedos, Carlos Román

2018-05-01

In this paper we propose a new approach for detecting the end of the T-wave in the electrocardiogram (ECG) using Neural Networks and Support Vector Machines. Both, Multilayer Perceptron (MLP) neural networks and Fixed-Size Least-Squares Support Vector Machines (FS-LSSVM) were used as regression algorithms to determine the end of the T-wave. Different strategies for selecting the training set such as random selection, k-means, robust clustering and maximum quadratic (Rényi) entropy were evaluated. Individual parameters were tuned for each method during training and the results are given for the evaluation set. A comparison between MLP and FS-LSSVM approaches was performed. Finally, a fair comparison of the FS-LSSVM method with other state-of-the-art algorithms for detecting the end of the T-wave was included. The experimental results show that FS-LSSVM approaches are more suitable as regression algorithms than MLP neural networks. Despite the small training sets used, the FS-LSSVM methods outperformed the state-of-the-art techniques. FS-LSSVM can be successfully used as a T-wave end detection algorithm in ECG even with small training set sizes. Copyright © 2018 Elsevier Ltd. All rights reserved.

Construction and decomposition of biorthogonal vector-valued wavelets with compact support

International Nuclear Information System (INIS)

Chen Qingjiang; Cao Huaixin; Shi Zhi

2009-01-01

In this article, we introduce vector-valued multiresolution analysis and the biorthogonal vector-valued wavelets with four-scale. The existence of a class of biorthogonal vector-valued wavelets with compact support associated with a pair of biorthogonal vector-valued scaling functions with compact support is discussed. A method for designing a class of biorthogonal compactly supported vector-valued wavelets with four-scale is proposed by virtue of multiresolution analysis and matrix theory. The biorthogonality properties concerning vector-valued wavelet packets are characterized with the aid of time-frequency analysis method and operator theory. Three biorthogonality formulas regarding them are presented.

Feature Import Vector Machine: A General Classifier with Flexible Feature Selection.

Science.gov (United States)

Ghosh, Samiran; Wang, Yazhen

2015-02-01

The support vector machine (SVM) and other reproducing kernel Hilbert space (RKHS) based classifier systems are drawing much attention recently due to its robustness and generalization capability. General theme here is to construct classifiers based on the training data in a high dimensional space by using all available dimensions. The SVM achieves huge data compression by selecting only few observations which lie close to the boundary of the classifier function. However when the number of observations are not very large (small n ) but the number of dimensions/features are large (large p ), then it is not necessary that all available features are of equal importance in the classification context. Possible selection of an useful fraction of the available features may result in huge data compression. In this paper we propose an algorithmic approach by means of which such an optimal set of features could be selected. In short, we reverse the traditional sequential observation selection strategy of SVM to that of sequential feature selection. To achieve this we have modified the solution proposed by Zhu and Hastie (2005) in the context of import vector machine (IVM), to select an optimal sub-dimensional model to build the final classifier with sufficient accuracy.

Combinatorial support vector machines approach for virtual screening of selective multi-target serotonin reuptake inhibitors from large compound libraries.

Science.gov (United States)

Shi, Z; Ma, X H; Qin, C; Jia, J; Jiang, Y Y; Tan, C Y; Chen, Y Z

2012-02-01

Selective multi-target serotonin reuptake inhibitors enhance antidepressant efficacy. Their discovery can be facilitated by multiple methods, including in silico ones. In this study, we developed and tested an in silico method, combinatorial support vector machines (COMBI-SVMs), for virtual screening (VS) multi-target serotonin reuptake inhibitors of seven target pairs (serotonin transporter paired with noradrenaline transporter, H(3) receptor, 5-HT(1A) receptor, 5-HT(1B) receptor, 5-HT(2C) receptor, melanocortin 4 receptor and neurokinin 1 receptor respectively) from large compound libraries. COMBI-SVMs trained with 917-1951 individual target inhibitors correctly identified 22-83.3% (majority >31.1%) of the 6-216 dual inhibitors collected from literature as independent testing sets. COMBI-SVMs showed moderate to good target selectivity in misclassifying as dual inhibitors 2.2-29.8% (majority virtual hits correlate with the reported effects of their predicted targets. COMBI-SVM is potentially useful for searching selective multi-target agents without explicit knowledge of these agents. Copyright © 2011 Elsevier Inc. All rights reserved.

Image superresolution using support vector regression.

Science.gov (United States)

Ni, Karl S; Nguyen, Truong Q

2007-06-01

A thorough investigation of the application of support vector regression (SVR) to the superresolution problem is conducted through various frameworks. Prior to the study, the SVR problem is enhanced by finding the optimal kernel. This is done by formulating the kernel learning problem in SVR form as a convex optimization problem, specifically a semi-definite programming (SDP) problem. An additional constraint is added to reduce the SDP to a quadratically constrained quadratic programming (QCQP) problem. After this optimization, investigation of the relevancy of SVR to superresolution proceeds with the possibility of using a single and general support vector regression for all image content, and the results are impressive for small training sets. This idea is improved upon by observing structural properties in the discrete cosine transform (DCT) domain to aid in learning the regression. Further improvement involves a combination of classification and SVR-based techniques, extending works in resolution synthesis. This method, termed kernel resolution synthesis, uses specific regressors for isolated image content to describe the domain through a partitioned look of the vector space, thereby yielding good results.

A Wavelet Kernel-Based Primal Twin Support Vector Machine for Economic Development Prediction

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Fang Su

2013-01-01

Full Text Available Economic development forecasting allows planners to choose the right strategies for the future. This study is to propose economic development prediction method based on the wavelet kernel-based primal twin support vector machine algorithm. As gross domestic product (GDP is an important indicator to measure economic development, economic development prediction means GDP prediction in this study. The wavelet kernel-based primal twin support vector machine algorithm can solve two smaller sized quadratic programming problems instead of solving a large one as in the traditional support vector machine algorithm. Economic development data of Anhui province from 1992 to 2009 are used to study the prediction performance of the wavelet kernel-based primal twin support vector machine algorithm. The comparison of mean error of economic development prediction between wavelet kernel-based primal twin support vector machine and traditional support vector machine models trained by the training samples with the 3–5 dimensional input vectors, respectively, is given in this paper. The testing results show that the economic development prediction accuracy of the wavelet kernel-based primal twin support vector machine model is better than that of traditional support vector machine.

Feature Selection Method Based on Artificial Bee Colony Algorithm and Support Vector Machines for Medical Datasets Classification

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Mustafa Serter Uzer

2013-01-01

Full Text Available This paper offers a hybrid approach that uses the artificial bee colony (ABC algorithm for feature selection and support vector machines for classification. The purpose of this paper is to test the effect of elimination of the unimportant and obsolete features of the datasets on the success of the classification, using the SVM classifier. The developed approach conventionally used in liver diseases and diabetes diagnostics, which are commonly observed and reduce the quality of life, is developed. For the diagnosis of these diseases, hepatitis, liver disorders and diabetes datasets from the UCI database were used, and the proposed system reached a classification accuracies of 94.92%, 74.81%, and 79.29%, respectively. For these datasets, the classification accuracies were obtained by the help of the 10-fold cross-validation method. The results show that the performance of the method is highly successful compared to other results attained and seems very promising for pattern recognition applications.

A multi-label learning based kernel automatic recommendation method for support vector machine.

Science.gov (United States)

Zhang, Xueying; Song, Qinbao

2015-01-01

Choosing an appropriate kernel is very important and critical when classifying a new problem with Support Vector Machine. So far, more attention has been paid on constructing new kernels and choosing suitable parameter values for a specific kernel function, but less on kernel selection. Furthermore, most of current kernel selection methods focus on seeking a best kernel with the highest classification accuracy via cross-validation, they are time consuming and ignore the differences among the number of support vectors and the CPU time of SVM with different kernels. Considering the tradeoff between classification success ratio and CPU time, there may be multiple kernel functions performing equally well on the same classification problem. Aiming to automatically select those appropriate kernel functions for a given data set, we propose a multi-label learning based kernel recommendation method built on the data characteristics. For each data set, the meta-knowledge data base is first created by extracting the feature vector of data characteristics and identifying the corresponding applicable kernel set. Then the kernel recommendation model is constructed on the generated meta-knowledge data base with the multi-label classification method. Finally, the appropriate kernel functions are recommended to a new data set by the recommendation model according to the characteristics of the new data set. Extensive experiments over 132 UCI benchmark data sets, with five different types of data set characteristics, eleven typical kernels (Linear, Polynomial, Radial Basis Function, Sigmoidal function, Laplace, Multiquadric, Rational Quadratic, Spherical, Spline, Wave and Circular), and five multi-label classification methods demonstrate that, compared with the existing kernel selection methods and the most widely used RBF kernel function, SVM with the kernel function recommended by our proposed method achieved the highest classification performance.

Prediction of Machine Tool Condition Using Support Vector Machine

International Nuclear Information System (INIS)

Wang Peigong; Meng Qingfeng; Zhao Jian; Li Junjie; Wang Xiufeng

2011-01-01

Condition monitoring and predicting of CNC machine tools are investigated in this paper. Considering the CNC machine tools are often small numbers of samples, a condition predicting method for CNC machine tools based on support vector machines (SVMs) is proposed, then one-step and multi-step condition prediction models are constructed. The support vector machines prediction models are used to predict the trends of working condition of a certain type of CNC worm wheel and gear grinding machine by applying sequence data of vibration signal, which is collected during machine processing. And the relationship between different eigenvalue in CNC vibration signal and machining quality is discussed. The test result shows that the trend of vibration signal Peak-to-peak value in surface normal direction is most relevant to the trend of surface roughness value. In trends prediction of working condition, support vector machine has higher prediction accuracy both in the short term ('One-step') and long term (multi-step) prediction compared to autoregressive (AR) model and the RBF neural network. Experimental results show that it is feasible to apply support vector machine to CNC machine tool condition prediction.

Phase Space Prediction of Chaotic Time Series with Nu-Support Vector Machine Regression

International Nuclear Information System (INIS)

Ye Meiying; Wang Xiaodong

2005-01-01

A new class of support vector machine, nu-support vector machine, is discussed which can handle both classification and regression. We focus on nu-support vector machine regression and use it for phase space prediction of chaotic time series. The effectiveness of the method is demonstrated by applying it to the Henon map. This study also compares nu-support vector machine with back propagation (BP) networks in order to better evaluate the performance of the proposed methods. The experimental results show that the nu-support vector machine regression obtains lower root mean squared error than the BP networks and provides an accurate chaotic time series prediction. These results can be attributable to the fact that nu-support vector machine implements the structural risk minimization principle and this leads to better generalization than the BP networks.

Icing Forecasting of High Voltage Transmission Line Using Weighted Least Square Support Vector Machine with Fireworks Algorithm for Feature Selection

Directory of Open Access Journals (Sweden)

Tiannan Ma

2016-12-01

Full Text Available Accurate forecasting of icing thickness has great significance for ensuring the security and stability of the power grid. In order to improve the forecasting accuracy, this paper proposes an icing forecasting system based on the fireworks algorithm and weighted least square support vector machine (W-LSSVM. The method of the fireworks algorithm is employed to select the proper input features with the purpose of eliminating redundant influence. In addition, the aim of the W-LSSVM model is to train and test the historical data-set with the selected features. The capability of this proposed icing forecasting model and framework is tested through simulation experiments using real-world icing data from the monitoring center of the key laboratory of anti-ice disaster, Hunan, South China. The results show that the proposed W-LSSVM-FA method has a higher prediction accuracy and it may be a promising alternative for icing thickness forecasting.

Product Quality Modelling Based on Incremental Support Vector Machine

International Nuclear Information System (INIS)

Wang, J; Zhang, W; Qin, B; Shi, W

2012-01-01

Incremental Support vector machine (ISVM) is a new learning method developed in recent years based on the foundations of statistical learning theory. It is suitable for the problem of sequentially arriving field data and has been widely used for product quality prediction and production process optimization. However, the traditional ISVM learning does not consider the quality of the incremental data which may contain noise and redundant data; it will affect the learning speed and accuracy to a great extent. In order to improve SVM training speed and accuracy, a modified incremental support vector machine (MISVM) is proposed in this paper. Firstly, the margin vectors are extracted according to the Karush-Kuhn-Tucker (KKT) condition; then the distance from the margin vectors to the final decision hyperplane is calculated to evaluate the importance of margin vectors, where the margin vectors are removed while their distance exceed the specified value; finally, the original SVs and remaining margin vectors are used to update the SVM. The proposed MISVM can not only eliminate the unimportant samples such as noise samples, but also can preserve the important samples. The MISVM has been experimented on two public data and one field data of zinc coating weight in strip hot-dip galvanizing, and the results shows that the proposed method can improve the prediction accuracy and the training speed effectively. Furthermore, it can provide the necessary decision supports and analysis tools for auto control of product quality, and also can extend to other process industries, such as chemical process and manufacturing process.

Scorebox extraction from mobile sports videos using Support Vector Machines

Science.gov (United States)

Kim, Wonjun; Park, Jimin; Kim, Changick

2008-08-01

Scorebox plays an important role in understanding contents of sports videos. However, the tiny scorebox may give the small-display-viewers uncomfortable experience in grasping the game situation. In this paper, we propose a novel framework to extract the scorebox from sports video frames. We first extract candidates by using accumulated intensity and edge information after short learning period. Since there are various types of scoreboxes inserted in sports videos, multiple attributes need to be used for efficient extraction. Based on those attributes, the optimal information gain is computed and top three ranked attributes in terms of information gain are selected as a three-dimensional feature vector for Support Vector Machines (SVM) to distinguish the scorebox from other candidates, such as logos and advertisement boards. The proposed method is tested on various videos of sports games and experimental results show the efficiency and robustness of our proposed method.

Altering the selection capabilities of common cloning vectors via restriction enzyme mediated gene disruption

Science.gov (United States)

2013-01-01

Background The cloning of gene sequences forms the basis for many molecular biological studies. One important step in the cloning process is the isolation of bacterial transformants carrying vector DNA. This involves a vector-encoded selectable marker gene, which in most cases, confers resistance to an antibiotic. However, there are a number of circumstances in which a different selectable marker is required or may be preferable. Such situations can include restrictions to host strain choice, two phase cloning experiments and mutagenesis experiments, issues that result in additional unnecessary cloning steps, in which the DNA needs to be subcloned into a vector with a suitable selectable marker. Results We have used restriction enzyme mediated gene disruption to modify the selectable marker gene of a given vector by cloning a different selectable marker gene into the original marker present in that vector. Cloning a new selectable marker into a pre-existing marker was found to change the selection phenotype conferred by that vector, which we were able to demonstrate using multiple commonly used vectors and multiple resistance markers. This methodology was also successfully applied not only to cloning vectors, but also to expression vectors while keeping the expression characteristics of the vector unaltered. Conclusions Changing the selectable marker of a given vector has a number of advantages and applications. This rapid and efficient method could be used for co-expression of recombinant proteins, optimisation of two phase cloning procedures, as well as multiple genetic manipulations within the same host strain without the need to remove a pre-existing selectable marker in a previously genetically modified strain. PMID:23497512

Support vector machine based fault classification and location of a long transmission line

Directory of Open Access Journals (Sweden)

Papia Ray

2016-09-01

Full Text Available This paper investigates support vector machine based fault type and distance estimation scheme in a long transmission line. The planned technique uses post fault single cycle current waveform and pre-processing of the samples is done by wavelet packet transform. Energy and entropy are obtained from the decomposed coefficients and feature matrix is prepared. Then the redundant features from the matrix are taken out by the forward feature selection method and normalized. Test and train data are developed by taking into consideration variables of a simulation situation like fault type, resistance path, inception angle, and distance. In this paper 10 different types of short circuit fault are analyzed. The test data are examined by support vector machine whose parameters are optimized by particle swarm optimization method. The anticipated method is checked on a 400 kV, 300 km long transmission line with voltage source at both the ends. Two cases were examined with the proposed method. The first one is fault very near to both the source end (front and rear and the second one is support vector machine with and without optimized parameter. Simulation result indicates that the anticipated method for fault classification gives high accuracy (99.21% and least fault distance estimation error (0.29%.

An Ensemble of Deep Support Vector Machines for Image Categorization

NARCIS (Netherlands)

Abdullah, Azizi; Veltkamp, Remco C.; Wiering, Marco

2009-01-01

This paper presents the deep support vector machine (D-SVM) inspired by the increasing popularity of deep belief networks for image recognition. Our deep SVM trains an SVM in the standard way and then uses the kernel activations of support vectors as inputs for training another SVM at the next

Twin support vector machines models, extensions and applications

CERN Document Server

Jayadeva; Chandra, Suresh

2017-01-01

This book provides a systematic and focused study of the various aspects of twin support vector machines (TWSVM) and related developments for classification and regression. In addition to presenting most of the basic models of TWSVM and twin support vector regression (TWSVR) available in the literature, it also discusses the important and challenging applications of this new machine learning methodology. A chapter on “Additional Topics” has been included to discuss kernel optimization and support tensor machine topics, which are comparatively new but have great potential in applications. It is primarily written for graduate students and researchers in the area of machine learning and related topics in computer science, mathematics, electrical engineering, management science and finance.

Recurrence predictive models for patients with hepatocellular carcinoma after radiofrequency ablation using support vector machines with feature selection methods.

Science.gov (United States)

Liang, Ja-Der; Ping, Xiao-Ou; Tseng, Yi-Ju; Huang, Guan-Tarn; Lai, Feipei; Yang, Pei-Ming

2014-12-01

Recurrence of hepatocellular carcinoma (HCC) is an important issue despite effective treatments with tumor eradication. Identification of patients who are at high risk for recurrence may provide more efficacious screening and detection of tumor recurrence. The aim of this study was to develop recurrence predictive models for HCC patients who received radiofrequency ablation (RFA) treatment. From January 2007 to December 2009, 83 newly diagnosed HCC patients receiving RFA as their first treatment were enrolled. Five feature selection methods including genetic algorithm (GA), simulated annealing (SA) algorithm, random forests (RF) and hybrid methods (GA+RF and SA+RF) were utilized for selecting an important subset of features from a total of 16 clinical features. These feature selection methods were combined with support vector machine (SVM) for developing predictive models with better performance. Five-fold cross-validation was used to train and test SVM models. The developed SVM-based predictive models with hybrid feature selection methods and 5-fold cross-validation had averages of the sensitivity, specificity, accuracy, positive predictive value, negative predictive value, and area under the ROC curve as 67%, 86%, 82%, 69%, 90%, and 0.69, respectively. The SVM derived predictive model can provide suggestive high-risk recurrent patients, who should be closely followed up after complete RFA treatment. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Application of Support Vector Machine to Forex Monitoring

Science.gov (United States)

Kamruzzaman, Joarder; Sarker, Ruhul A.

Previous studies have demonstrated superior performance of artificial neural network (ANN) based forex forecasting models over traditional regression models. This paper applies support vector machines to build a forecasting model from the historical data using six simple technical indicators and presents a comparison with an ANN based model trained by scaled conjugate gradient (SCG) learning algorithm. The models are evaluated and compared on the basis of five commonly used performance metrics that measure closeness of prediction as well as correctness in directional change. Forecasting results of six different currencies against Australian dollar reveal superior performance of SVM model using simple linear kernel over ANN-SCG model in terms of all the evaluation metrics. The effect of SVM parameter selection on prediction performance is also investigated and analyzed.

Indonesian Stock Prediction using Support Vector Machine (SVM

Directory of Open Access Journals (Sweden)

Santoso Murtiyanto

2018-01-01

Full Text Available This project is part of developing software to provide predictive information technology-based services artificial intelligence (Machine Intelligence or Machine Learning that will be utilized in the money market community. The prediction method used in this early stages uses the combination of Gaussian Mixture Model and Support Vector Machine with Python programming. The system predicts the price of Astra International (stock code: ASII.JK stock data. The data used was taken during 17 yr period of January 2000 until September 2017. Some data was used for training/modeling (80 % of data and the remainder (20 % was used for testing. An integrated model comprising Gaussian Mixture Model and Support Vector Machine system has been tested to predict stock market of ASII.JK for l d in advance. This model has been compared with the Market Cummulative Return. From the results, it is depicts that the Gaussian Mixture Model-Support Vector Machine based stock predicted model, offers significant improvement over the compared models resulting sharpe ratio of 3.22.

Voltammetric electronic tongue and support vector machines for identification of selected features in Mexican coffee.

Science.gov (United States)

Domínguez, Rocio Berenice; Moreno-Barón, Laura; Muñoz, Roberto; Gutiérrez, Juan Manuel

2014-09-24

This paper describes a new method based on a voltammetric electronic tongue (ET) for the recognition of distinctive features in coffee samples. An ET was directly applied to different samples from the main Mexican coffee regions without any pretreatment before the analysis. The resulting electrochemical information was modeled with two different mathematical tools, namely Linear Discriminant Analysis (LDA) and Support Vector Machines (SVM). Growing conditions (i.e., organic or non-organic practices and altitude of crops) were considered for a first classification. LDA results showed an average discrimination rate of 88% ± 6.53% while SVM successfully accomplished an overall accuracy of 96.4% ± 3.50% for the same task. A second classification based on geographical origin of samples was carried out. Results showed an overall accuracy of 87.5% ± 7.79% for LDA and a superior performance of 97.5% ± 3.22% for SVM. Given the complexity of coffee samples, the high accuracy percentages achieved by ET coupled with SVM in both classification problems suggested a potential applicability of ET in the assessment of selected coffee features with a simpler and faster methodology along with a null sample pretreatment. In addition, the proposed method can be applied to authentication assessment while improving cost, time and accuracy of the general procedure.

Support vector machine for automatic pain recognition

Science.gov (United States)

Monwar, Md Maruf; Rezaei, Siamak

2009-02-01

Facial expressions are a key index of emotion and the interpretation of such expressions of emotion is critical to everyday social functioning. In this paper, we present an efficient video analysis technique for recognition of a specific expression, pain, from human faces. We employ an automatic face detector which detects face from the stored video frame using skin color modeling technique. For pain recognition, location and shape features of the detected faces are computed. These features are then used as inputs to a support vector machine (SVM) for classification. We compare the results with neural network based and eigenimage based automatic pain recognition systems. The experiment results indicate that using support vector machine as classifier can certainly improve the performance of automatic pain recognition system.

Support vector machine for diagnosis cancer disease: A comparative study

Directory of Open Access Journals (Sweden)

Nasser H. Sweilam

2010-12-01

Full Text Available Support vector machine has become an increasingly popular tool for machine learning tasks involving classification, regression or novelty detection. Training a support vector machine requires the solution of a very large quadratic programming problem. Traditional optimization methods cannot be directly applied due to memory restrictions. Up to now, several approaches exist for circumventing the above shortcomings and work well. Another learning algorithm, particle swarm optimization, Quantum-behave Particle Swarm for training SVM is introduced. Another approach named least square support vector machine (LSSVM and active set strategy are introduced. The obtained results by these methods are tested on a breast cancer dataset and compared with the exact solution model problem.

Compactly Supported Basis Functions as Support Vector Kernels for Classification.

Science.gov (United States)

Wittek, Peter; Tan, Chew Lim

2011-10-01

Wavelet kernels have been introduced for both support vector regression and classification. Most of these wavelet kernels do not use the inner product of the embedding space, but use wavelets in a similar fashion to radial basis function kernels. Wavelet analysis is typically carried out on data with a temporal or spatial relation between consecutive data points. We argue that it is possible to order the features of a general data set so that consecutive features are statistically related to each other, thus enabling us to interpret the vector representation of an object as a series of equally or randomly spaced observations of a hypothetical continuous signal. By approximating the signal with compactly supported basis functions and employing the inner product of the embedding L2 space, we gain a new family of wavelet kernels. Empirical results show a clear advantage in favor of these kernels.

Comparison of confirmed inactive and randomly selected compounds as negative training examples in support vector machine-based virtual screening.

Science.gov (United States)

Heikamp, Kathrin; Bajorath, Jürgen

2013-07-22

The choice of negative training data for machine learning is a little explored issue in chemoinformatics. In this study, the influence of alternative sets of negative training data and different background databases on support vector machine (SVM) modeling and virtual screening has been investigated. Target-directed SVM models have been derived on the basis of differently composed training sets containing confirmed inactive molecules or randomly selected database compounds as negative training instances. These models were then applied to search background databases consisting of biological screening data or randomly assembled compounds for available hits. Negative training data were found to systematically influence compound recall in virtual screening. In addition, different background databases had a strong influence on the search results. Our findings also indicated that typical benchmark settings lead to an overestimation of SVM-based virtual screening performance compared to search conditions that are more relevant for practical applications.

A support vector density-based importance sampling for reliability assessment

International Nuclear Information System (INIS)

Dai, Hongzhe; Zhang, Hao; Wang, Wei

2012-01-01

An importance sampling method based on the adaptive Markov chain simulation and support vector density estimation is developed in this paper for efficient structural reliability assessment. The methodology involves the generation of samples that can adaptively populate the important region by the adaptive Metropolis algorithm, and the construction of importance sampling density by support vector density. The use of the adaptive Metropolis algorithm may effectively improve the convergence and stability of the classical Markov chain simulation. The support vector density can approximate the sampling density with fewer samples in comparison to the conventional kernel density estimation. The proposed importance sampling method can effectively reduce the number of structural analysis required for achieving a given accuracy. Examples involving both numerical and practical structural problems are given to illustrate the application and efficiency of the proposed methodology.

Output-only modal parameter estimator of linear time-varying structural systems based on vector TAR model and least squares support vector machine

Science.gov (United States)

Zhou, Si-Da; Ma, Yuan-Chen; Liu, Li; Kang, Jie; Ma, Zhi-Sai; Yu, Lei

2018-01-01

Identification of time-varying modal parameters contributes to the structural health monitoring, fault detection, vibration control, etc. of the operational time-varying structural systems. However, it is a challenging task because there is not more information for the identification of the time-varying systems than that of the time-invariant systems. This paper presents a vector time-dependent autoregressive model and least squares support vector machine based modal parameter estimator for linear time-varying structural systems in case of output-only measurements. To reduce the computational cost, a Wendland's compactly supported radial basis function is used to achieve the sparsity of the Gram matrix. A Gamma-test-based non-parametric approach of selecting the regularization factor is adapted for the proposed estimator to replace the time-consuming n-fold cross validation. A series of numerical examples have illustrated the advantages of the proposed modal parameter estimator on the suppression of the overestimate and the short data. A laboratory experiment has further validated the proposed estimator.

Design, development and evaluation of an online grading system for peeled pistachios equipped with machine vision technology and support vector machine

Directory of Open Access Journals (Sweden)

Hosein Nouri-Ahmadabadi

2017-12-01

Full Text Available In this study, an intelligent system based on combined machine vision (MV and Support Vector Machine (SVM was developed for sorting of peeled pistachio kernels and shells. The system was composed of conveyor belt, lighting box, camera, processing unit and sorting unit. A color CCD camera was used to capture images. The images were digitalized by a capture card and transferred to a personal computer for further analysis. Initially, images were converted from RGB color space to HSV color ones. For segmentation of the acquired images, H-component in the HSV color space and Otsu thresholding method were applied. A feature vector containing 30 color features was extracted from the captured images. A feature selection method based on sensitivity analysis was carried out to select superior features. The selected features were presented to SVM classifier. Various SVM models having a different kernel function were developed and tested. The SVM model having cubic polynomial kernel function and 38 support vectors achieved the best accuracy (99.17% and then was selected to use in online decision-making unit of the system. By launching the online system, it was found that limiting factors of the system capacity were related to the hardware parts of the system (conveyor belt and pneumatic valves used in the sorting unit. The limiting factors led to a distance of 8 mm between the samples. The overall accuracy and capacity of the sorter were obtained 94.33% and 22.74 kg/h, respectively. Keywords: Pistachio kernel, Sorting, Machine vision, Sensitivity analysis, Support vector machine

A novel improved fuzzy support vector machine based stock price trend forecast model

OpenAIRE

Wang, Shuheng; Li, Guohao; Bao, Yifan

2018-01-01

Application of fuzzy support vector machine in stock price forecast. Support vector machine is a new type of machine learning method proposed in 1990s. It can deal with classification and regression problems very successfully. Due to the excellent learning performance of support vector machine, the technology has become a hot research topic in the field of machine learning, and it has been successfully applied in many fields. However, as a new technology, there are many limitations to support...

Support of the extremal measure in a vector equilibrium problem

International Nuclear Information System (INIS)

Lapik, M A

2006-01-01

A generalization of the Mhaskar-Saff functional is obtained for a vector equilibrium problem with an external field. As an application, the supports of the equilibrium measures are found in a special vector equilibrium problem with Nikishin matrix.

Support vector machines and generalisation in HEP

Science.gov (United States)

Bevan, Adrian; Gamboa Goñi, Rodrigo; Hays, Jon; Stevenson, Tom

2017-10-01

We review the concept of Support Vector Machines (SVMs) and discuss examples of their use in a number of scenarios. Several SVM implementations have been used in HEP and we exemplify this algorithm using the Toolkit for Multivariate Analysis (TMVA) implementation. We discuss examples relevant to HEP including background suppression for H → τ + τ - at the LHC with several different kernel functions. Performance benchmarking leads to the issue of generalisation of hyper-parameter selection. The avoidance of fine tuning (over training or over fitting) in MVA hyper-parameter optimisation, i.e. the ability to ensure generalised performance of an MVA that is independent of the training, validation and test samples, is of utmost importance. We discuss this issue and compare and contrast performance of hold-out and k-fold cross-validation. We have extended the SVM functionality and introduced tools to facilitate cross validation in TMVA and present results based on these improvements.

Support vector machine based diagnostic system for breast cancer using swarm intelligence.

Science.gov (United States)

Chen, Hui-Ling; Yang, Bo; Wang, Gang; Wang, Su-Jing; Liu, Jie; Liu, Da-You

2012-08-01

Breast cancer is becoming a leading cause of death among women in the whole world, meanwhile, it is confirmed that the early detection and accurate diagnosis of this disease can ensure a long survival of the patients. In this paper, a swarm intelligence technique based support vector machine classifier (PSO_SVM) is proposed for breast cancer diagnosis. In the proposed PSO-SVM, the issue of model selection and feature selection in SVM is simultaneously solved under particle swarm (PSO optimization) framework. A weighted function is adopted to design the objective function of PSO, which takes into account the average accuracy rates of SVM (ACC), the number of support vectors (SVs) and the selected features simultaneously. Furthermore, time varying acceleration coefficients (TVAC) and inertia weight (TVIW) are employed to efficiently control the local and global search in PSO algorithm. The effectiveness of PSO-SVM has been rigorously evaluated against the Wisconsin Breast Cancer Dataset (WBCD), which is commonly used among researchers who use machine learning methods for breast cancer diagnosis. The proposed system is compared with the grid search method with feature selection by F-score. The experimental results demonstrate that the proposed approach not only obtains much more appropriate model parameters and discriminative feature subset, but also needs smaller set of SVs for training, giving high predictive accuracy. In addition, Compared to the existing methods in previous studies, the proposed system can also be regarded as a promising success with the excellent classification accuracy of 99.3% via 10-fold cross validation (CV) analysis. Moreover, a combination of five informative features is identified, which might provide important insights to the nature of the breast cancer disease and give an important clue for the physicians to take a closer attention. We believe the promising result can ensure that the physicians make very accurate diagnostic decision in

Applications of Support Vector Machine (SVM) Learning in Cancer Genomics

OpenAIRE

HUANG, SHUJUN; CAI, NIANGUANG; PACHECO, PEDRO PENZUTI; NARANDES, SHAVIRA; WANG, YANG; XU, WAYNE

2017-01-01

Machine learning with maximization (support) of separating margin (vector), called support vector machine (SVM) learning, is a powerful classification tool that has been used for cancer genomic classification or subtyping. Today, as advancements in high-throughput technologies lead to production of large amounts of genomic and epigenomic data, the classification feature of SVMs is expanding its use in cancer genomics, leading to the discovery of new biomarkers, new drug targets, and a better ...

Support Vector Machines for Hyperspectral Remote Sensing Classification

Science.gov (United States)

Gualtieri, J. Anthony; Cromp, R. F.

1998-01-01

The Support Vector Machine provides a new way to design classification algorithms which learn from examples (supervised learning) and generalize when applied to new data. We demonstrate its success on a difficult classification problem from hyperspectral remote sensing, where we obtain performances of 96%, and 87% correct for a 4 class problem, and a 16 class problem respectively. These results are somewhat better than other recent results on the same data. A key feature of this classifier is its ability to use high-dimensional data without the usual recourse to a feature selection step to reduce the dimensionality of the data. For this application, this is important, as hyperspectral data consists of several hundred contiguous spectral channels for each exemplar. We provide an introduction to this new approach, and demonstrate its application to classification of an agriculture scene.

A Two-Layer Least Squares Support Vector Machine Approach to Credit Risk Assessment

Science.gov (United States)

Liu, Jingli; Li, Jianping; Xu, Weixuan; Shi, Yong

Least squares support vector machine (LS-SVM) is a revised version of support vector machine (SVM) and has been proved to be a useful tool for pattern recognition. LS-SVM had excellent generalization performance and low computational cost. In this paper, we propose a new method called two-layer least squares support vector machine which combines kernel principle component analysis (KPCA) and linear programming form of least square support vector machine. With this method sparseness and robustness is obtained while solving large dimensional and large scale database. A U.S. commercial credit card database is used to test the efficiency of our method and the result proved to be a satisfactory one.

Evolutionary-driven support vector machines for determining the degree of liver fibrosis in chronic hepatitis C.

Science.gov (United States)

Stoean, Ruxandra; Stoean, Catalin; Lupsor, Monica; Stefanescu, Horia; Badea, Radu

2011-01-01

Hepatic fibrosis, the principal pointer to the development of a liver disease within chronic hepatitis C, can be measured through several stages. The correct evaluation of its degree, based on recent different non-invasive procedures, is of current major concern. The latest methodology for assessing it is the Fibroscan and the effect of its employment is impressive. However, the complex interaction between its stiffness indicator and the other biochemical and clinical examinations towards a respective degree of liver fibrosis is hard to be manually discovered. In this respect, the novel, well-performing evolutionary-powered support vector machines are proposed towards an automated learning of the relationship between medical attributes and fibrosis levels. The traditional support vector machines have been an often choice for addressing hepatic fibrosis, while the evolutionary option has been validated on many real-world tasks and proven flexibility and good performance. The evolutionary approach is simple and direct, resulting from the hybridization of the learning component within support vector machines and the optimization engine of evolutionary algorithms. It discovers the optimal coefficients of surfaces that separate instances of distinct classes. Apart from a detached manner of establishing the fibrosis degree for new cases, a resulting formula also offers insight upon the correspondence between the medical factors and the respective outcome. What is more, a feature selection genetic algorithm can be further embedded into the method structure, in order to dynamically concentrate search only on the most relevant attributes. The data set refers 722 patients with chronic hepatitis C infection and 24 indicators. The five possible degrees of fibrosis range from F0 (no fibrosis) to F4 (cirrhosis). Since the standard support vector machines are among the most frequently used methods in recent artificial intelligence studies for hepatic fibrosis staging, the

Hyperspectral image classification using Support Vector Machine

International Nuclear Information System (INIS)

Moughal, T A

2013-01-01

Classification of land cover hyperspectral images is a very challenging task due to the unfavourable ratio between the number of spectral bands and the number of training samples. The focus in many applications is to investigate an effective classifier in terms of accuracy. The conventional multiclass classifiers have the ability to map the class of interest but the considerable efforts and large training sets are required to fully describe the classes spectrally. Support Vector Machine (SVM) is suggested in this paper to deal with the multiclass problem of hyperspectral imagery. The attraction to this method is that it locates the optimal hyper plane between the class of interest and the rest of the classes to separate them in a new high-dimensional feature space by taking into account only the training samples that lie on the edge of the class distributions known as support vectors and the use of the kernel functions made the classifier more flexible by making it robust against the outliers. A comparative study has undertaken to find an effective classifier by comparing Support Vector Machine (SVM) to the other two well known classifiers i.e. Maximum likelihood (ML) and Spectral Angle Mapper (SAM). At first, the Minimum Noise Fraction (MNF) was applied to extract the best possible features form the hyperspectral imagery and then the resulting subset of the features was applied to the classifiers. Experimental results illustrate that the integration of MNF and SVM technique significantly reduced the classification complexity and improves the classification accuracy.

Automatic Detection of Retinal Exudates using a Support Vector Machine

Directory of Open Access Journals (Sweden)

Nualsawat HIRANSAKOLWONG

2013-02-01

Full Text Available Retinal exudates are among the preliminary signs of diabetic retinopathy, a major cause of vision loss in diabetic patients. Correct and efficient screening of exudates is very expensive in professional time and may cause human error. Nowadays, the digital retinal image is frequently used to follow-up and diagnoses eye diseases. Therefore, the retinal image is crucial and essential for experts to detect exudates. Unfortunately, it is a normal situation that retinal images in Thailand are poor quality images. In this paper, we present a series of experiments on feature selection and exudates classification using the support vector machine classifiers. The retinal images are segmented following key preprocessing steps, i.e., color normalization, contrast enhancement, noise removal and color space selection. On data sets of poor quality images, sensitivity, specificity and accuracy is 94.46%, 89.52% and 92.14%, respectively.

Landslide susceptibility mapping using support vector machine and ...

Indian Academy of Sciences (India)

the prediction rate methods, the validation process was performed by ... support vector machine (SVM); geographical information systems (GIS); ... 2012a), decision tree methods (Akgun .... gence or divergence of water during downhill flow.

Support Vector Machine and Application in Seizure Prediction

KAUST Repository

Qiu, Simeng

2018-04-01

Nowadays, Machine learning (ML) has been utilized in various kinds of area which across the range from engineering field to business area. In this paper, we first present several kernel machine learning methods of solving classification, regression and clustering problems. These have good performance but also have some limitations. We present examples to each method and analyze the advantages and disadvantages for solving different scenarios. Then we focus on one of the most popular classification methods, Support Vectors Machine (SVM). In addition, we introduce the basic theory, advantages and scenarios of using Support Vector Machine (SVM) deal with classification problems. We also explain a convenient approach of tacking SVM problems which are called Sequential Minimal Optimization (SMO). Moreover, one class SVM can be understood in a different way which is called Support Vector Data Description (SVDD). This is a famous non-linear model problem compared with SVM problems, SVDD can be solved by utilizing Gaussian RBF kernel function combined with SMO. At last, we compared the difference and performance of SVM-SMO implementation and SVM-SVDD implementation. About the application part, we utilized SVM method to handle seizure forecasting in canine epilepsy, after comparing the results from different methods such as random forest, extremely randomized tree, and SVM to classify preictal (pre-seizure) and interictal (interval-seizure) binary data. We draw the conclusion that SVM has the best performance.

An assessment of support vector machines for land cover classification

Science.gov (United States)

Huang, C.; Davis, L.S.; Townshend, J.R.G.

2002-01-01

The support vector machine (SVM) is a group of theoretically superior machine learning algorithms. It was found competitive with the best available machine learning algorithms in classifying high-dimensional data sets. This paper gives an introduction to the theoretical development of the SVM and an experimental evaluation of its accuracy, stability and training speed in deriving land cover classifications from satellite images. The SVM was compared to three other popular classifiers, including the maximum likelihood classifier (MLC), neural network classifiers (NNC) and decision tree classifiers (DTC). The impacts of kernel configuration on the performance of the SVM and of the selection of training data and input variables on the four classifiers were also evaluated in this experiment.

Online Artifact Removal for Brain-Computer Interfaces Using Support Vector Machines and Blind Source Separation

OpenAIRE

Halder, Sebastian; Bensch, Michael; Mellinger, Jürgen; Bogdan, Martin; Kübler, Andrea; Birbaumer, Niels; Rosenstiel, Wolfgang

2007-01-01

We propose a combination of blind source separation (BSS) and independent component analysis (ICA) (signal decomposition into artifacts and nonartifacts) with support vector machines (SVMs) (automatic classification) that are designed for online usage. In order to select a suitable BSS/ICA method, three ICA algorithms (JADE, Infomax, and FastICA) and one BSS algorithm (AMUSE) are evaluated to determine their ability to isolate electromyographic (EMG) and electrooculographic...

Constructing Support Vector Machine Ensembles for Cancer Classification Based on Proteomic Profiling

Institute of Scientific and Technical Information of China (English)

Yong Mao; Xiao-Bo Zhou; Dao-Ying Pi; You-Xian Sun

2005-01-01

In this study, we present a constructive algorithm for training cooperative support vector machine ensembles (CSVMEs). CSVME combines ensemble architecture design with cooperative training for individual SVMs in ensembles. Unlike most previous studies on training ensembles, CSVME puts emphasis on both accuracy and collaboration among individual SVMs in an ensemble. A group of SVMs selected on the basis of recursive classifier elimination is used in CSVME, and the number of the individual SVMs selected to construct CSVME is determined by 10-fold cross-validation. This kind of SVME has been tested on two ovarian cancer datasets previously obtained by proteomic mass spectrometry. By combining several individual SVMs, the proposed method achieves better performance than the SVME of all base SVMs.

SAM: Support Vector Machine Based Active Queue Management

International Nuclear Information System (INIS)

Shah, M.S.

2014-01-01

Recent years have seen an increasing interest in the design of AQM (Active Queue Management) controllers. The purpose of these controllers is to manage the network congestion under varying loads, link delays and bandwidth. In this paper, a new AQM controller is proposed which is trained by using the SVM (Support Vector Machine) with the RBF (Radial Basis Function) kernal. The proposed controller is called the support vector based AQM (SAM) controller. The performance of the proposed controller has been compared with three conventional AQM controllers, namely the Random Early Detection, Blue and Proportional Plus Integral Controller. The preliminary simulation studies show that the performance of the proposed controller is comparable to the conventional controllers. However, the proposed controller is more efficient in controlling the queue size than the conventional controllers. (author)

A Hybrid Least Square Support Vector Machine Model with Parameters Optimization for Stock Forecasting

Directory of Open Access Journals (Sweden)

Jian Chai

2015-01-01

Full Text Available This paper proposes an EMD-LSSVM (empirical mode decomposition least squares support vector machine model to analyze the CSI 300 index. A WD-LSSVM (wavelet denoising least squares support machine is also proposed as a benchmark to compare with the performance of EMD-LSSVM. Since parameters selection is vital to the performance of the model, different optimization methods are used, including simplex, GS (grid search, PSO (particle swarm optimization, and GA (genetic algorithm. Experimental results show that the EMD-LSSVM model with GS algorithm outperforms other methods in predicting stock market movement direction.

Single scan vector prediction in selective laser melting

NARCIS (Netherlands)

Wits, Wessel Willems; Bruins, R.; Terpstra, L.; Huls, R.A.; Geijselaers, Hubertus J.M.

2015-01-01

In selective laser melting (SLM) products are built by melting layers of metal powder successively. Optimal process parameters are usually obtained by scanning single vectors and subsequently determining which settings lead to a good compromise between product density and build speed. This paper

Support-vector-based emergent self-organising approach for emotional understanding

Science.gov (United States)

Nguwi, Yok-Yen; Cho, Siu-Yeung

2010-12-01

This study discusses the computational analysis of general emotion understanding from questionnaires methodology. The questionnaires method approaches the subject by investigating the real experience that accompanied the emotions, whereas the other laboratory approaches are generally associated with exaggerated elements. We adopted a connectionist model called support-vector-based emergent self-organising map (SVESOM) to analyse the emotion profiling from the questionnaires method. The SVESOM first identifies the important variables by giving discriminative features with high ranking. The classifier then performs the classification based on the selected features. Experimental results show that the top rank features are in line with the work of Scherer and Wallbott [(1994), 'Evidence for Universality and Cultural Variation of Differential Emotion Response Patterning', Journal of Personality and Social Psychology, 66, 310-328], which approached the emotions physiologically. While the performance measures show that using the full features for classifications can degrade the performance, the selected features provide superior results in terms of accuracy and generalisation.

Community detection in complex networks using proximate support vector clustering

Science.gov (United States)

Wang, Feifan; Zhang, Baihai; Chai, Senchun; Xia, Yuanqing

2018-03-01

Community structure, one of the most attention attracting properties in complex networks, has been a cornerstone in advances of various scientific branches. A number of tools have been involved in recent studies concentrating on the community detection algorithms. In this paper, we propose a support vector clustering method based on a proximity graph, owing to which the introduced algorithm surpasses the traditional support vector approach both in accuracy and complexity. Results of extensive experiments undertaken on computer generated networks and real world data sets illustrate competent performances in comparison with the other counterparts.

Short-term traffic flow prediction model using particle swarm optimization–based combined kernel function-least squares support vector machine combined with chaos theory

Directory of Open Access Journals (Sweden)

Qiang Shang

2016-08-01

Full Text Available Short-term traffic flow prediction is an important part of intelligent transportation systems research and applications. For further improving the accuracy of short-time traffic flow prediction, a novel hybrid prediction model (multivariate phase space reconstruction–combined kernel function-least squares support vector machine based on multivariate phase space reconstruction and combined kernel function-least squares support vector machine is proposed. The C-C method is used to determine the optimal time delay and the optimal embedding dimension of traffic variables’ (flow, speed, and occupancy time series for phase space reconstruction. The G-P method is selected to calculate the correlation dimension of attractor which is an important index for judging chaotic characteristics of the traffic variables’ series. The optimal input form of combined kernel function-least squares support vector machine model is determined by multivariate phase space reconstruction, and the model’s parameters are optimized by particle swarm optimization algorithm. Finally, case validation is carried out using the measured data of an expressway in Xiamen, China. The experimental results suggest that the new proposed model yields better predictions compared with similar models (combined kernel function-least squares support vector machine, multivariate phase space reconstruction–generalized kernel function-least squares support vector machine, and phase space reconstruction–combined kernel function-least squares support vector machine, which indicates that the new proposed model exhibits stronger prediction ability and robustness.

LINEAR KERNEL SUPPORT VECTOR MACHINES FOR MODELING PORE-WATER PRESSURE RESPONSES

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KHAMARUZAMAN W. YUSOF

2017-08-01

Full Text Available Pore-water pressure responses are vital in many aspects of slope management, design and monitoring. Its measurement however, is difficult, expensive and time consuming. Studies on its predictions are lacking. Support vector machines with linear kernel was used here to predict the responses of pore-water pressure to rainfall. Pore-water pressure response data was collected from slope instrumentation program. Support vector machine meta-parameter calibration and model development was carried out using grid search and k-fold cross validation. The mean square error for the model on scaled test data is 0.0015 and the coefficient of determination is 0.9321. Although pore-water pressure response to rainfall is a complex nonlinear process, the use of linear kernel support vector machine can be employed where high accuracy can be sacrificed for computational ease and time.

A Novel Support Vector Machine with Globality-Locality Preserving

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Cheng-Long Ma

2014-01-01

Full Text Available Support vector machine (SVM is regarded as a powerful method for pattern classification. However, the solution of the primal optimal model of SVM is susceptible for class distribution and may result in a nonrobust solution. In order to overcome this shortcoming, an improved model, support vector machine with globality-locality preserving (GLPSVM, is proposed. It introduces globality-locality preserving into the standard SVM, which can preserve the manifold structure of the data space. We complete rich experiments on the UCI machine learning data sets. The results validate the effectiveness of the proposed model, especially on the Wine and Iris databases; the recognition rate is above 97% and outperforms all the algorithms that were developed from SVM.

Weighted K-means support vector machine for cancer prediction.

Science.gov (United States)

Kim, SungHwan

2016-01-01

To date, the support vector machine (SVM) has been widely applied to diverse bio-medical fields to address disease subtype identification and pathogenicity of genetic variants. In this paper, I propose the weighted K-means support vector machine (wKM-SVM) and weighted support vector machine (wSVM), for which I allow the SVM to impose weights to the loss term. Besides, I demonstrate the numerical relations between the objective function of the SVM and weights. Motivated by general ensemble techniques, which are known to improve accuracy, I directly adopt the boosting algorithm to the newly proposed weighted KM-SVM (and wSVM). For predictive performance, a range of simulation studies demonstrate that the weighted KM-SVM (and wSVM) with boosting outperforms the standard KM-SVM (and SVM) including but not limited to many popular classification rules. I applied the proposed methods to simulated data and two large-scale real applications in the TCGA pan-cancer methylation data of breast and kidney cancer. In conclusion, the weighted KM-SVM (and wSVM) increases accuracy of the classification model, and will facilitate disease diagnosis and clinical treatment decisions to benefit patients. A software package (wSVM) is publicly available at the R-project webpage (https://www.r-project.org).

Experimental comparison of support vector machines with random ...

Indian Academy of Sciences (India)

dient method, support vector machines, and random forests to improve producer accuracy and overall classification accuracy. The performance comparison of these classifiers is valuable for a decision maker ... ping, surveillance system, resource management, tracking ... rocks, water bodies, and anthropogenic elements,.

Intelligent Design of Metal Oxide Gas Sensor Arrays Using Reciprocal Kernel Support Vector Regression

Science.gov (United States)

Dougherty, Andrew W.

Metal oxides are a staple of the sensor industry. The combination of their sensitivity to a number of gases, and the electrical nature of their sensing mechanism, make the particularly attractive in solid state devices. The high temperature stability of the ceramic material also make them ideal for detecting combustion byproducts where exhaust temperatures can be high. However, problems do exist with metal oxide sensors. They are not very selective as they all tend to be sensitive to a number of reduction and oxidation reactions on the oxide's surface. This makes sensors with large numbers of sensors interesting to study as a method for introducing orthogonality to the system. Also, the sensors tend to suffer from long term drift for a number of reasons. In this thesis I will develop a system for intelligently modeling metal oxide sensors and determining their suitability for use in large arrays designed to analyze exhaust gas streams. It will introduce prior knowledge of the metal oxide sensors' response mechanisms in order to produce a response function for each sensor from sparse training data. The system will use the same technique to model and remove any long term drift from the sensor response. It will also provide an efficient means for determining the orthogonality of the sensor to determine whether they are useful in gas sensing arrays. The system is based on least squares support vector regression using the reciprocal kernel. The reciprocal kernel is introduced along with a method of optimizing the free parameters of the reciprocal kernel support vector machine. The reciprocal kernel is shown to be simpler and to perform better than an earlier kernel, the modified reciprocal kernel. Least squares support vector regression is chosen as it uses all of the training points and an emphasis was placed throughout this research for extracting the maximum information from very sparse data. The reciprocal kernel is shown to be effective in modeling the sensor

Prediction of Skin Sensitization with a Particle Swarm Optimized Support Vector Machine

Directory of Open Access Journals (Sweden)

Chenzhong Cao

2009-07-01

Full Text Available Skin sensitization is the most commonly reported occupational illness, causing much suffering to a wide range of people. Identification and labeling of environmental allergens is urgently required to protect people from skin sensitization. The guinea pig maximization test (GPMT and murine local lymph node assay (LLNA are the two most important in vivo models for identification of skin sensitizers. In order to reduce the number of animal tests, quantitative structure-activity relationships (QSARs are strongly encouraged in the assessment of skin sensitization of chemicals. This paper has investigated the skin sensitization potential of 162 compounds with LLNA results and 92 compounds with GPMT results using a support vector machine. A particle swarm optimization algorithm was implemented for feature selection from a large number of molecular descriptors calculated by Dragon. For the LLNA data set, the classification accuracies are 95.37% and 88.89% for the training and the test sets, respectively. For the GPMT data set, the classification accuracies are 91.80% and 90.32% for the training and the test sets, respectively. The classification performances were greatly improved compared to those reported in the literature, indicating that the support vector machine optimized by particle swarm in this paper is competent for the identification of skin sensitizers.

Prediction of Skin Sensitization with a Particle Swarm Optimized Support Vector Machine

Science.gov (United States)

Yuan, Hua; Huang, Jianping; Cao, Chenzhong

2009-01-01

Skin sensitization is the most commonly reported occupational illness, causing much suffering to a wide range of people. Identification and labeling of environmental allergens is urgently required to protect people from skin sensitization. The guinea pig maximization test (GPMT) and murine local lymph node assay (LLNA) are the two most important in vivo models for identification of skin sensitizers. In order to reduce the number of animal tests, quantitative structure-activity relationships (QSARs) are strongly encouraged in the assessment of skin sensitization of chemicals. This paper has investigated the skin sensitization potential of 162 compounds with LLNA results and 92 compounds with GPMT results using a support vector machine. A particle swarm optimization algorithm was implemented for feature selection from a large number of molecular descriptors calculated by Dragon. For the LLNA data set, the classification accuracies are 95.37% and 88.89% for the training and the test sets, respectively. For the GPMT data set, the classification accuracies are 91.80% and 90.32% for the training and the test sets, respectively. The classification performances were greatly improved compared to those reported in the literature, indicating that the support vector machine optimized by particle swarm in this paper is competent for the identification of skin sensitizers. PMID:19742136

Prediction of Banking Systemic Risk Based on Support Vector Machine

Directory of Open Access Journals (Sweden)

Shouwei Li

2013-01-01

Full Text Available Banking systemic risk is a complex nonlinear phenomenon and has shed light on the importance of safeguarding financial stability by recent financial crisis. According to the complex nonlinear characteristics of banking systemic risk, in this paper we apply support vector machine (SVM to the prediction of banking systemic risk in an attempt to suggest a new model with better explanatory power and stability. We conduct a case study of an SVM-based prediction model for Chinese banking systemic risk and find the experiment results showing that support vector machine is an efficient method in such case.

Reconfigurable support vector machine classifier with approximate computing

NARCIS (Netherlands)

van Leussen, M.J.; Huisken, J.; Wang, L.; Jiao, H.; De Gyvez, J.P.

2017-01-01

Support Vector Machine (SVM) is one of the most popular machine learning algorithms. An energy-efficient SVM classifier is proposed in this paper, where approximate computing is utilized to reduce energy consumption and silicon area. A hardware architecture with reconfigurable kernels and

GenSVM: a generalized multiclass support vector machine

NARCIS (Netherlands)

G.J.J. van den Burg (Gertjan); P.J.F. Groenen (Patrick)

2016-01-01

textabstractTraditional extensions of the binary support vector machine (SVM) to multiclass problems are either heuristics or require solving a large dual optimization problem. Here, a generalized multiclass SVM is proposed called GenSVM. In this method classification boundaries for a K-class

Sistem Deteksi Retinopati Diabetik Menggunakan Support Vector Machine

Directory of Open Access Journals (Sweden)

Wahyudi Setiawan

2014-02-01

Full Text Available Diabetic Retinopathy is a complication of Diabetes Melitus. It can be a blindness if untreated settled as early as possible. System created in this thesis is the detection of diabetic retinopathy level of the image obtained from fundus photographs. There are three main steps to resolve the problems, preprocessing, feature extraction and classification. Preprocessing methods that used in this system are Grayscale Green Channel, Gaussian Filter, Contrast Limited Adaptive Histogram Equalization and Masking. Two Dimensional Linear Discriminant Analysis (2DLDA is used for feature extraction. Support Vector Machine (SVM is used for classification. The test result performed by taking a dataset of MESSIDOR with number of images that vary for the training phase, otherwise is used for the testing phase. Test result show the optimal accuracy are 84% .   Keywords : Diabetic Retinopathy, Support Vector Machine, Two Dimensional Linear Discriminant Analysis, MESSIDOR

Automated detection of pulmonary nodules in CT images with support vector machines

Science.gov (United States)

Liu, Lu; Liu, Wanyu; Sun, Xiaoming

2008-10-01

Many methods have been proposed to avoid radiologists fail to diagnose small pulmonary nodules. Recently, support vector machines (SVMs) had received an increasing attention for pattern recognition. In this paper, we present a computerized system aimed at pulmonary nodules detection; it identifies the lung field, extracts a set of candidate regions with a high sensitivity ratio and then classifies candidates by the use of SVMs. The Computer Aided Diagnosis (CAD) system presented in this paper supports the diagnosis of pulmonary nodules from Computed Tomography (CT) images as inflammation, tuberculoma, granuloma..sclerosing hemangioma, and malignant tumor. Five texture feature sets were extracted for each lesion, while a genetic algorithm based feature selection method was applied to identify the most robust features. The selected feature set was fed into an ensemble of SVMs classifiers. The achieved classification performance was 100%, 92.75% and 90.23% in the training, validation and testing set, respectively. It is concluded that computerized analysis of medical images in combination with artificial intelligence can be used in clinical practice and may contribute to more efficient diagnosis.

Mining protein function from text using term-based support vector machines

Science.gov (United States)

Rice, Simon B; Nenadic, Goran; Stapley, Benjamin J

2005-01-01

Background Text mining has spurred huge interest in the domain of biology. The goal of the BioCreAtIvE exercise was to evaluate the performance of current text mining systems. We participated in Task 2, which addressed assigning Gene Ontology terms to human proteins and selecting relevant evidence from full-text documents. We approached it as a modified form of the document classification task. We used a supervised machine-learning approach (based on support vector machines) to assign protein function and select passages that support the assignments. As classification features, we used a protein's co-occurring terms that were automatically extracted from documents. Results The results evaluated by curators were modest, and quite variable for different problems: in many cases we have relatively good assignment of GO terms to proteins, but the selected supporting text was typically non-relevant (precision spanning from 3% to 50%). The method appears to work best when a substantial set of relevant documents is obtained, while it works poorly on single documents and/or short passages. The initial results suggest that our approach can also mine annotations from text even when an explicit statement relating a protein to a GO term is absent. Conclusion A machine learning approach to mining protein function predictions from text can yield good performance only if sufficient training data is available, and significant amount of supporting data is used for prediction. The most promising results are for combined document retrieval and GO term assignment, which calls for the integration of methods developed in BioCreAtIvE Task 1 and Task 2. PMID:15960835

A nonlinear support vector machine model with hard penalty function based on glowworm swarm optimization for forecasting daily global solar radiation

International Nuclear Information System (INIS)

Jiang, He; Dong, Yao

2016-01-01

Highlights: • Eclat data mining algorithm is used to determine the possible predictors. • Support vector machine is converted into a ridge regularization problem. • Hard penalty selects the number of radial basis functions to simply the structure. • Glowworm swarm optimization is utilized to determine the optimal parameters. - Abstract: For a portion of the power which is generated by grid connected photovoltaic installations, an effective solar irradiation forecasting approach must be crucial to ensure the quality and the security of power grid. This paper develops and investigates a novel model to forecast 30 daily global solar radiation at four given locations of the United States. Eclat data mining algorithm is first presented to discover association rules between solar radiation and several meteorological factors laying a theoretical foundation for these correlative factors as input vectors. An effective and innovative intelligent optimization model based on nonlinear support vector machine and hard penalty function is proposed to forecast solar radiation by converting support vector machine into a regularization problem with ridge penalty, adding a hard penalty function to select the number of radial basis functions, and using glowworm swarm optimization algorithm to determine the optimal parameters of the model. In order to illustrate our validity of the proposed method, the datasets at four sites of the United States are split to into training data and test data, separately. The experiment results reveal that the proposed model delivers the best forecasting performances comparing with other competitors.

Multivariate calibration with least-squares support vector machines.

NARCIS (Netherlands)

Thissen, U.M.J.; Ustun, B.; Melssen, W.J.; Buydens, L.M.C.

2004-01-01

This paper proposes the use of least-squares support vector machines (LS-SVMs) as a relatively new nonlinear multivariate calibration method, capable of dealing with ill-posed problems. LS-SVMs are an extension of "traditional" SVMs that have been introduced recently in the field of chemistry and

Twin Support Vector Machine: A review from 2007 to 2014

Directory of Open Access Journals (Sweden)

Divya Tomar

2015-03-01

Full Text Available Twin Support Vector Machine (TWSVM is an emerging machine learning method suitable for both classification and regression problems. It utilizes the concept of Generalized Eigen-values Proximal Support Vector Machine (GEPSVM and finds two non-parallel planes for each class by solving a pair of Quadratic Programming Problems. It enhances the computational speed as compared to the traditional Support Vector Machine (SVM. TWSVM was initially constructed to solve binary classification problems; later researchers successfully extended it for multi-class problem domain. TWSVM always gives promising empirical results, due to which it has many attractive features which enhance its applicability. This paper presents the research development of TWSVM in recent years. This study is divided into two main broad categories - variant based and multi-class based TWSVM methods. The paper primarily discusses the basic concept of TWSVM and highlights its applications in recent years. A comparative analysis of various research contributions based on TWSVM is also presented. This is helpful for researchers to effectively utilize the TWSVM as an emergent research methodology and encourage them to work further in the performance enhancement of TWSVM.

Collapse moment estimation by support vector machines for wall-thinned pipe bends and elbows

International Nuclear Information System (INIS)

Na, Man Gyun; Kim, Jin Weon; Hwang, In Joon

2007-01-01

The collapse moment due to wall-thinned defects is estimated through support vector machines with parameters optimized by a genetic algorithm. The support vector regression models are developed and applied to numerical data obtained from the finite element analysis for wall-thinned defects in piping systems. The support vector regression models are optimized by using both the data sets (training data and optimization data) prepared for training and optimization, and its performance verification is performed by using another data set (test data) different from the training data and the optimization data. In this work, three support vector regression models are developed, respectively, for three data sets divided into the three classes of extrados, intrados, and crown defects, which is because they have different characteristics. The relative root mean square (RMS) errors of the estimated collapse moment are 0.2333% for the training data, 0.5229% for the optimization data and 0.5011% for the test data. It is known from this result that the support vector regression models are sufficiently accurate to be used in the integrity evaluation of wall-thinned pipe bends and elbows

Infinite ensemble of support vector machines for prediction of ...

African Journals Online (AJOL)

user

the support vector machines (SVMs), a machine learning algorithm used ... work designs so that specific, quantitative workplace assessments can be made ... with SVMs can be obtained by embedding the base learners (hypothesis) into a.

Support vector machine for the diagnosis of malignant mesothelioma

Science.gov (United States)

Ushasukhanya, S.; Nithyakalyani, A.; Sivakumar, V.

2018-04-01

Harmful mesothelioma is an illness in which threatening (malignancy) cells shape in the covering of the trunk or stomach area. Being presented to asbestos can influence the danger of threatening mesothelioma. Signs and side effects of threatening mesothelioma incorporate shortness of breath and agony under the rib confine. Tests that inspect within the trunk and belly are utilized to recognize (find) and analyse harmful mesothelioma. Certain elements influence forecast (shot of recuperation) and treatment choices. In this review, Support vector machine (SVM) classifiers were utilized for Mesothelioma sickness conclusion. SVM output is contrasted by concentrating on Mesothelioma’s sickness and findings by utilizing similar information set. The support vector machine algorithm gives 92.5% precision acquired by means of 3-overlap cross-approval. The Mesothelioma illness dataset were taken from an organization reports from Turkey.

Chord Recognition Based on Temporal Correlation Support Vector Machine

Directory of Open Access Journals (Sweden)

Zhongyang Rao

2016-05-01

Full Text Available In this paper, we propose a method called temporal correlation support vector machine (TCSVM for automatic major-minor chord recognition in audio music. We first use robust principal component analysis to separate the singing voice from the music to reduce the influence of the singing voice and consider the temporal correlations of the chord features. Using robust principal component analysis, we expect the low-rank component of the spectrogram matrix to contain the musical accompaniment and the sparse component to contain the vocal signals. Then, we extract a new logarithmic pitch class profile (LPCP feature called enhanced LPCP from the low-rank part. To exploit the temporal correlation among the LPCP features of chords, we propose an improved support vector machine algorithm called TCSVM. We perform this study using the MIREX’09 (Music Information Retrieval Evaluation eXchange Audio Chord Estimation dataset. Furthermore, we conduct comprehensive experiments using different pitch class profile feature vectors to examine the performance of TCSVM. The results of our method are comparable to the state-of-the-art methods that entered the MIREX in 2013 and 2014 for the MIREX’09 Audio Chord Estimation task dataset.

Integrated Features by Administering the Support Vector Machine (SVM of Translational Initiations Sites in Alternative Polymorphic Contex

Directory of Open Access Journals (Sweden)

Nurul Arneida Husin

2012-04-01

Full Text Available Many algorithms and methods have been proposed for classification problems in bioinformatics. In this study, the discriminative approach in particular support vector machines (SVM is employed to recognize the studied TIS patterns. The applied discriminative approach is used to learn about some discriminant functions of samples that have been labelled as positive or negative. After learning, the discriminant functions are employed to decide whether a new sample is true or false. In this study, support vector machines (SVM is employed to recognize the patterns for studied translational initiation sites in alternative weak context. The method has been optimized with the best parameters selected; c=100, E=10-6 and ex=2 for non linear kernel function. Results show that with top 5 features and non linear kernel, the best prediction accuracy achieved is 95.8%. J48 algorithm is applied to compare with SVM with top 15 features and the results show a good prediction accuracy of 95.8%. This indicates that the top 5 features selected by the IGR method and that are performed by SVM are sufficient to use in the prediction of TIS in weak contexts.

Financial Distress Prediction using Linear Discriminant Analysis and Support Vector Machine

Science.gov (United States)

Santoso, Noviyanti; Wibowo, Wahyu

2018-03-01

A financial difficulty is the early stages before the bankruptcy. Bankruptcies caused by the financial distress can be seen from the financial statements of the company. The ability to predict financial distress became an important research topic because it can provide early warning for the company. In addition, predicting financial distress is also beneficial for investors and creditors. This research will be made the prediction model of financial distress at industrial companies in Indonesia by comparing the performance of Linear Discriminant Analysis (LDA) and Support Vector Machine (SVM) combined with variable selection technique. The result of this research is prediction model based on hybrid Stepwise-SVM obtains better balance among fitting ability, generalization ability and model stability than the other models.

Adding Cross-Platform Support to a High-Throughput Software Stack and Exploration of Vectorization Libraries

CERN Document Server

AUTHOR|(CDS)2258962

This master thesis is written at the LHCb experiment at CERN. It is part of the initiative for improving software in view of the upcoming upgrade in 2021 which will significantly increase the amount of acquired data. This thesis consists of two parts. The first part is about the exploration of different vectorization libraries and their usefulness for the LHCb collaboration. The second part is about adding cross-platform support to the LHCb software stack. Here, the LHCb stack is successfully ported to ARM (aarch64) and its performance is analyzed. At the end of the thesis, the port to PowerPC(ppc64le) awaits the performance analysis. The main goal of porting the stack is the cost-performance evaluation for the different platforms to get the most cost efficient hardware for the new server farm for the upgrade. For this, selected vectorization libraries are extended to support the PowerPC and ARM platform. And though the same compiler is used, platform-specific changes to the compilation flags are required. In...

Novel feature selection method based on Stochastic Methods Coupled to Support Vector Machines using H- NMR data (data of olive and hazelnut oils

Directory of Open Access Journals (Sweden)

Oscar Eduardo Gualdron

2014-12-01

Full Text Available One of the principal inconveniences that analysis and information processing presents is that of the representation of dataset. Normally, one encounters a high number of samples, each one with thousands of variables, and in many cases with irrelevant information and noise. Therefore, in order to represent findings in a clearer way, it is necessary to reduce the amount of variables. In this paper, a novel variable selection technique for multivariable data analysis, inspired on stochastic methods and designed to work with support vector machines (SVM, is described. The approach is demonstrated in a food application involving the detection of adulteration of olive oil (more expensive with hazelnut oil (cheaper. Fingerprinting by H NMR spectroscopy was used to analyze the different samples. Results show that it is possible to reduce the number of variables without affecting classification results.

Density Based Support Vector Machines for Classification

OpenAIRE

Zahra Nazari; Dongshik Kang

2015-01-01

Support Vector Machines (SVM) is the most successful algorithm for classification problems. SVM learns the decision boundary from two classes (for Binary Classification) of training points. However, sometimes there are some less meaningful samples amongst training points, which are corrupted by noises or misplaced in wrong side, called outliers. These outliers are affecting on margin and classification performance, and machine should better to discard them. SVM as a popular and widely used cl...

Evaluating automatically parallelized versions of the support vector machine

NARCIS (Netherlands)

Codreanu, Valeriu; Droge, Bob; Williams, David; Yasar, Burhan; Yang, Fo; Liu, Baoquan; Dong, Feng; Surinta, Olarik; Schomaker, Lambertus; Roerdink, Jos; Wiering, Marco

2014-01-01

The support vector machine (SVM) is a supervised learning algorithm used for recognizing patterns in data. It is a very popular technique in machine learning and has been successfully used in applications such as image classification, protein classification, and handwriting recognition. However, the

Evaluating automatically parallelized versions of the support vector machine

NARCIS (Netherlands)

Codreanu, V.; Dröge, B.; Williams, D.; Yasar, B.; Yang, P.; Liu, B.; Dong, F.; Surinta, O.; Schomaker, L.R.B.; Roerdink, J.B.T.M.; Wiering, M.A.

2016-01-01

The support vector machine (SVM) is a supervised learning algorithm used for recognizing patterns in data. It is a very popular technique in machine learning and has been successfully used in applications such as image classification, protein classification, and handwriting recognition. However, the

Support Vector Machines: Relevance Feedback and Information Retrieval.

Science.gov (United States)

Drucker, Harris; Shahrary, Behzad; Gibbon, David C.

2002-01-01

Compares support vector machines (SVMs) to Rocchio, Ide regular and Ide dec-hi algorithms in information retrieval (IR) of text documents using relevancy feedback. If the preliminary search is so poor that one has to search through many documents to find at least one relevant document, then SVM is preferred. Includes nine tables. (Contains 24…

Applications of Support Vector Machine (SVM) Learning in Cancer Genomics.

Science.gov (United States)

Huang, Shujun; Cai, Nianguang; Pacheco, Pedro Penzuti; Narrandes, Shavira; Wang, Yang; Xu, Wayne

2018-01-01

Machine learning with maximization (support) of separating margin (vector), called support vector machine (SVM) learning, is a powerful classification tool that has been used for cancer genomic classification or subtyping. Today, as advancements in high-throughput technologies lead to production of large amounts of genomic and epigenomic data, the classification feature of SVMs is expanding its use in cancer genomics, leading to the discovery of new biomarkers, new drug targets, and a better understanding of cancer driver genes. Herein we reviewed the recent progress of SVMs in cancer genomic studies. We intend to comprehend the strength of the SVM learning and its future perspective in cancer genomic applications. Copyright© 2018, International Institute of Anticancer Research (Dr. George J. Delinasios), All rights reserved.

Multiscale asymmetric orthogonal wavelet kernel for linear programming support vector learning and nonlinear dynamic systems identification.

Science.gov (United States)

Lu, Zhao; Sun, Jing; Butts, Kenneth

2014-05-01

Support vector regression for approximating nonlinear dynamic systems is more delicate than the approximation of indicator functions in support vector classification, particularly for systems that involve multitudes of time scales in their sampled data. The kernel used for support vector learning determines the class of functions from which a support vector machine can draw its solution, and the choice of kernel significantly influences the performance of a support vector machine. In this paper, to bridge the gap between wavelet multiresolution analysis and kernel learning, the closed-form orthogonal wavelet is exploited to construct new multiscale asymmetric orthogonal wavelet kernels for linear programming support vector learning. The closed-form multiscale orthogonal wavelet kernel provides a systematic framework to implement multiscale kernel learning via dyadic dilations and also enables us to represent complex nonlinear dynamics effectively. To demonstrate the superiority of the proposed multiscale wavelet kernel in identifying complex nonlinear dynamic systems, two case studies are presented that aim at building parallel models on benchmark datasets. The development of parallel models that address the long-term/mid-term prediction issue is more intricate and challenging than the identification of series-parallel models where only one-step ahead prediction is required. Simulation results illustrate the effectiveness of the proposed multiscale kernel learning.

Variance inflation in high dimensional Support Vector Machines

DEFF Research Database (Denmark)

Abrahamsen, Trine Julie; Hansen, Lars Kai

2013-01-01

Many important machine learning models, supervised and unsupervised, are based on simple Euclidean distance or orthogonal projection in a high dimensional feature space. When estimating such models from small training sets we face the problem that the span of the training data set input vectors...... the case of Support Vector Machines (SVMS) and we propose a non-parametric scheme to restore proper generalizability. We illustrate the algorithm and its ability to restore performance on a wide range of benchmark data sets....... follow a different probability law with less variance. While the problem and basic means to reconstruct and deflate are well understood in unsupervised learning, the case of supervised learning is less well understood. We here investigate the effect of variance inflation in supervised learning including...

Support Vector Machines for decision support in electricity markets׳ strategic bidding

DEFF Research Database (Denmark)

Pinto, Tiago; Sousa, Tiago M.; Praça, Isabel

2015-01-01

. The ALBidS system allows MASCEM market negotiating players to take the best possible advantages from the market context. This paper presents the application of a Support Vector Machines (SVM) based approach to provide decision support to electricity market players. This strategy is tested and validated...... by being included in ALBidS and then compared with the application of an Artificial Neural Network (ANN), originating promising results: an effective electricity market price forecast in a fast execution time. The proposed approach is tested and validated using real electricity markets data from MIBEL......׳ research group has developed a multi-agent system: Multi-Agent System for Competitive Electricity Markets (MASCEM), which simulates the electricity markets environment. MASCEM is integrated with Adaptive Learning Strategic Bidding System (ALBidS) that works as a decision support system for market players...

A novel prokaryotic vector for identification and selection of recombinants: Direct use of the vector for expression studies in E. coli

Directory of Open Access Journals (Sweden)

Apte-Deshpande Anjali

2010-05-01

Full Text Available Abstract Background The selection of bacterial recombinants that harbour a desired insert, has been a key factor in molecular cloning and a series of screening procedures need to be performed for selection of clones carrying the genes of interest. The conventional cloning techniques are reported to have problems such as screening high number of colonies, generation of false positives, setting up of control ligation mix with vector alone etc. Results We describe the development of a novel dual cloning/expression vector, which enables to screen the recombinants directly and expression of the gene of interest. The vector contains Green fluorescence protein (GFP as the reporter gene and is constructed in such a way that the E. coli cells upon transformation with this vector does not show any fluorescence, but readily fluoresce upon insertion of a foreign gene of interest. The same construct could be easily used for screening of the clones and expression studies by mere switching to specific hosts. Conclusions This is the first vector reported that takes the property of colour or fluorescence to be achieved only upon cloning while all the other vectors available commercially show loss of colour or loss of fluorescence upon cloning. As the fluorescence of GFP depends on the solubility of the protein, the intensity of the fluorescence would also indicate the extent of solubility of the expressed target protein.

Predicting post-translational lysine acetylation using support vector machines

DEFF Research Database (Denmark)

Gnad, Florian; Ren, Shubin; Choudhary, Chunaram

2010-01-01

spectrometry to identify 3600 lysine acetylation sites on 1750 human proteins covering most of the previously annotated sites and providing the most comprehensive acetylome so far. This dataset should provide an excellent source to train support vector machines (SVMs) allowing the high accuracy in silico...

Identifying saltcedar with hyperspectral data and support vector machines

Science.gov (United States)

Saltcedar (Tamarix spp.) are a group of dense phreatophytic shrubs and trees that are invasive to riparian areas throughout the United States. This study determined the feasibility of using hyperspectral data and a support vector machine (SVM) classifier to discriminate saltcedar from other cover t...

Track Circuit Fault Diagnosis Method based on Least Squares Support Vector

Science.gov (United States)

Cao, Yan; Sun, Fengru

2018-01-01

In order to improve the troubleshooting efficiency and accuracy of the track circuit, track circuit fault diagnosis method was researched. Firstly, the least squares support vector machine was applied to design the multi-fault classifier of the track circuit, and then the measured track data as training samples was used to verify the feasibility of the methods. Finally, the results based on BP neural network fault diagnosis methods and the methods used in this paper were compared. Results shows that the track fault classifier based on least squares support vector machine can effectively achieve the five track circuit fault diagnosis with less computing time.

Multi-class parkinsonian disorders classification with quantitative MR markers and graph-based features using support vector machines.

Science.gov (United States)

Morisi, Rita; Manners, David Neil; Gnecco, Giorgio; Lanconelli, Nico; Testa, Claudia; Evangelisti, Stefania; Talozzi, Lia; Gramegna, Laura Ludovica; Bianchini, Claudio; Calandra-Buonaura, Giovanna; Sambati, Luisa; Giannini, Giulia; Cortelli, Pietro; Tonon, Caterina; Lodi, Raffaele

2018-02-01

In this study we attempt to automatically classify individual patients with different parkinsonian disorders, making use of pattern recognition techniques to distinguish among several forms of parkinsonisms (multi-class classification), based on a set of binary classifiers that discriminate each disorder from all others. We combine diffusion tensor imaging, proton spectroscopy and morphometric-volumetric data to obtain MR quantitative markers, which are provided to support vector machines with the aim of recognizing the different parkinsonian disorders. Feature selection is used to find the most important features for classification. We also exploit a graph-based technique on the set of quantitative markers to extract additional features from the dataset, and increase classification accuracy. When graph-based features are not used, the MR markers that are most frequently automatically extracted by the feature selection procedure reflect alterations in brain regions that are also usually considered to discriminate parkinsonisms in routine clinical practice. Graph-derived features typically increase the diagnostic accuracy, and reduce the number of features required. The results obtained in the work demonstrate that support vector machines applied to multimodal brain MR imaging and using graph-based features represent a novel and highly accurate approach to discriminate parkinsonisms, and a useful tool to assist the diagnosis. Copyright © 2017 Elsevier Ltd. All rights reserved.

Forecast of hourly global horizontal irradiance based on structured Kernel Support Vector Machine: A case study of Tibet area in China

International Nuclear Information System (INIS)

Jiang, He; Dong, Yao

2017-01-01

Highlights: • The structured variable selection in Kernel SVM is implemented using two ways. • The two-way interaction model is considered to enforce Heredity Principle. • SVMIC is used to select the kernel parameter in proposed approaches. • Simple and fast computations algorithms are derived. - Abstract: Various applications of forecasting effective global horizontal irradiance play increasingly vital role in grid-connected photovoltaic installations, but suffer from forecasting inaccuracy and prohibitively expensive computational cost. Although Support Vector Machine (SVM) is one of the most powerful forecasting approaches, it does not provide an interpretable model. This motivates penalized variable selection methods to be introduced to SVM to select important variables. However, in some forecasting problems, there are some underlying logic or hierarchical structure such as heredity principle among the variables. Penalized Kernel SVM approaches do not take heredity principles into consideration when enforcing sparsity. This paper investigates structural variable selection in Kernel SVM based approach which pursues heredity principle and sparsity simultaneously. To achieve heredity principle, both optimization and procedure based structural variable selection approaches are studied in the Kernel SVM. Computationally, we derive fast and simple-to-implement algorithms to perform structural variable selection and solar irradiance forecasting. Furthermore, Support Vector Machines Information Criterion is utilized to select the kernel parameters to guarantee the model consistency. Real data experiments directly reveal that our proposed KSVM-SVS based approach following heredity principle delivers superior performances in terms of forecasting accuracy comparing with other competitors.

Perbandingan Simple Logistic Classifier dengan Support Vector Machine dalam Memprediksi Kemenangan Atlet

Directory of Open Access Journals (Sweden)

Ednawati Rainarli

2017-10-01

Full Text Available A coach must be able to select which athlete has a good prospect of winning a game. There are a lot of aspects which influence the athlete in winning a game, so it's not easy by coach to decide it.This research would compare Simple Logistic Classifier (SLC and Support Vector Machine (SVM usage applied to predict winning game of athlete based on health and physical condition record. The data get from 28 sports. The accuracy of SLC and SVM are 80% and 88% meanwhile processing times of SLC and SVM method are 1.6 seconds dan 0.2 seconds.The result shows the SVM usage superior to the SLC both of speed process and the value of accuracy. There were also testing of 24 features used in the classifications process. Based on the test, features selection process can cause decreasing the accuracy value. This result concludes that all features used in this research influence the determination of a victory athletes prediction.

A Support Vector Learning-Based Particle Filter Scheme for Target Localization in Communication-Constrained Underwater Acoustic Sensor Networks.

Science.gov (United States)

Li, Xinbin; Zhang, Chenglin; Yan, Lei; Han, Song; Guan, Xinping

2017-12-21

Target localization, which aims to estimate the location of an unknown target, is one of the key issues in applications of underwater acoustic sensor networks (UASNs). However, the constrained property of an underwater environment, such as restricted communication capacity of sensor nodes and sensing noises, makes target localization a challenging problem. This paper relies on fractional sensor nodes to formulate a support vector learning-based particle filter algorithm for the localization problem in communication-constrained underwater acoustic sensor networks. A node-selection strategy is exploited to pick fractional sensor nodes with short-distance pattern to participate in the sensing process at each time frame. Subsequently, we propose a least-square support vector regression (LSSVR)-based observation function, through which an iterative regression strategy is used to deal with the distorted data caused by sensing noises, to improve the observation accuracy. At the same time, we integrate the observation to formulate the likelihood function, which effectively update the weights of particles. Thus, the particle effectiveness is enhanced to avoid "particle degeneracy" problem and improve localization accuracy. In order to validate the performance of the proposed localization algorithm, two different noise scenarios are investigated. The simulation results show that the proposed localization algorithm can efficiently improve the localization accuracy. In addition, the node-selection strategy can effectively select the subset of sensor nodes to improve the communication efficiency of the sensor network.

The Construction of Support Vector Machine Classifier Using the Firefly Algorithm

Directory of Open Access Journals (Sweden)

Chih-Feng Chao

2015-01-01

Full Text Available The setting of parameters in the support vector machines (SVMs is very important with regard to its accuracy and efficiency. In this paper, we employ the firefly algorithm to train all parameters of the SVM simultaneously, including the penalty parameter, smoothness parameter, and Lagrangian multiplier. The proposed method is called the firefly-based SVM (firefly-SVM. This tool is not considered the feature selection, because the SVM, together with feature selection, is not suitable for the application in a multiclass classification, especially for the one-against-all multiclass SVM. In experiments, binary and multiclass classifications are explored. In the experiments on binary classification, ten of the benchmark data sets of the University of California, Irvine (UCI, machine learning repository are used; additionally the firefly-SVM is applied to the multiclass diagnosis of ultrasonic supraspinatus images. The classification performance of firefly-SVM is also compared to the original LIBSVM method associated with the grid search method and the particle swarm optimization based SVM (PSO-SVM. The experimental results advocate the use of firefly-SVM to classify pattern classifications for maximum accuracy.

Infinite ensemble of support vector machines for prediction of ...

African Journals Online (AJOL)

Many researchers have demonstrated the use of artificial neural networks (ANNs) to predict musculoskeletal disorders risk associated with occupational exposures. In order to improve the accuracy of LBDs risk classification, this paper proposes to use the support vector machines (SVMs), a machine learning algorithm used ...

Fuzzy-based multi-kernel spherical support vector machine for ...

Indian Academy of Sciences (India)

In the proposed classifier, we design a new multi-kernel function based on the fuzzy triangular membership function. Finally, a newly developed multi-kernel function is incorporated into the spherical support vector machine to enhance the performance significantly. The experimental results are evaluated and performance is ...

Particle swarm optimization-based support vector machine for forecasting dissolved gases content in power transformer oil

Energy Technology Data Exchange (ETDEWEB)

Fei, Sheng-wei; Wang, Ming-Jun; Miao, Yu-bin; Tu, Jun; Liu, Cheng-liang [School of Mechanical Engineering, Shanghai Jiaotong University, Shanghai 200240 (China)

2009-06-15

Forecasting of dissolved gases content in power transformer oil is a complicated problem due to its nonlinearity and the small quantity of training data. Support vector machine (SVM) has been successfully employed to solve regression problem of nonlinearity and small sample. However, the practicability of SVM is effected due to the difficulty of selecting appropriate SVM parameters. Particle swarm optimization (PSO) is a new optimization method, which is motivated by social behaviour of organisms such as bird flocking and fish schooling. The method not only has strong global search capability, but also is very easy to implement. Thus, the proposed PSO-SVM model is applied to forecast dissolved gases content in power transformer oil in this paper, among which PSO is used to determine free parameters of support vector machine. The experimental data from several electric power companies in China is used to illustrate the performance of proposed PSO-SVM model. The experimental results indicate that the PSO-SVM method can achieve greater forecasting accuracy than grey model, artificial neural network under the circumstances of small sample. (author)

Particle swarm optimization-based support vector machine for forecasting dissolved gases content in power transformer oil

Energy Technology Data Exchange (ETDEWEB)

Fei Shengwei [School of Mechanical Engineering, Shanghai Jiaotong University, Shanghai 200240 (China)], E-mail: feishengwei@sohu.com; Wang Mingjun; Miao Yubin; Tu Jun; Liu Chengliang [School of Mechanical Engineering, Shanghai Jiaotong University, Shanghai 200240 (China)

2009-06-15

Forecasting of dissolved gases content in power transformer oil is a complicated problem due to its nonlinearity and the small quantity of training data. Support vector machine (SVM) has been successfully employed to solve regression problem of nonlinearity and small sample. However, the practicability of SVM is effected due to the difficulty of selecting appropriate SVM parameters. Particle swarm optimization (PSO) is a new optimization method, which is motivated by social behaviour of organisms such as bird flocking and fish schooling. The method not only has strong global search capability, but also is very easy to implement. Thus, the proposed PSO-SVM model is applied to forecast dissolved gases content in power transformer oil in this paper, among which PSO is used to determine free parameters of support vector machine. The experimental data from several electric power companies in China is used to illustrate the performance of proposed PSO-SVM model. The experimental results indicate that the PSO-SVM method can achieve greater forecasting accuracy than grey model, artificial neural network under the circumstances of small sample.

Anticipatory Monitoring and Control of Complex Systems using a Fuzzy based Fusion of Support Vector Regressors

Energy Technology Data Exchange (ETDEWEB)

Miltiadis Alamaniotis; Vivek Agarwal

2014-10-01

This paper places itself in the realm of anticipatory systems and envisions monitoring and control methods being capable of making predictions over system critical parameters. Anticipatory systems allow intelligent control of complex systems by predicting their future state. In the current work, an intelligent model aimed at implementing anticipatory monitoring and control in energy industry is presented and tested. More particularly, a set of support vector regressors (SVRs) are trained using both historical and observed data. The trained SVRs are used to predict the future value of the system based on current operational system parameter. The predicted values are then inputted to a fuzzy logic based module where the values are fused to obtain a single value, i.e., final system output prediction. The methodology is tested on real turbine degradation datasets. The outcome of the approach presented in this paper highlights the superiority over single support vector regressors. In addition, it is shown that appropriate selection of fuzzy sets and fuzzy rules plays an important role in improving system performance.

Hybrid RGSA and Support Vector Machine Framework for Three-Dimensional Magnetic Resonance Brain Tumor Classification

Directory of Open Access Journals (Sweden)

R. Rajesh Sharma

2015-01-01

algorithm (RGSA. Support vector machines, over backpropagation network, and k-nearest neighbor are used to evaluate the goodness of classifier approach. The preliminary evaluation of the system is performed using 320 real-time brain MRI images. The system is trained and tested by using a leave-one-case-out method. The performance of the classifier is tested using the receiver operating characteristic curve of 0.986 (±002. The experimental results demonstrate the systematic and efficient feature extraction and feature selection algorithm to the performance of state-of-the-art feature classification methods.

Support Vector Machine Classification of Drunk Driving Behaviour.

Science.gov (United States)

Chen, Huiqin; Chen, Lei

2017-01-23

Alcohol is the root cause of numerous traffic accidents due to its pharmacological action on the human central nervous system. This study conducted a detection process to distinguish drunk driving from normal driving under simulated driving conditions. The classification was performed by a support vector machine (SVM) classifier trained to distinguish between these two classes by integrating both driving performance and physiological measurements. In addition, principal component analysis was conducted to rank the weights of the features. The standard deviation of R-R intervals (SDNN), the root mean square value of the difference of the adjacent R-R interval series (RMSSD), low frequency (LF), high frequency (HF), the ratio of the low and high frequencies (LF/HF), and average blink duration were the highest weighted features in the study. The results show that SVM classification can successfully distinguish drunk driving from normal driving with an accuracy of 70%. The driving performance data and the physiological measurements reported by this paper combined with air-alcohol concentration could be integrated using the support vector regression classification method to establish a better early warning model, thereby improving vehicle safety.

Support Vector Machine Classification of Drunk Driving Behaviour

Directory of Open Access Journals (Sweden)

Huiqin Chen

2017-01-01

Full Text Available Alcohol is the root cause of numerous traffic accidents due to its pharmacological action on the human central nervous system. This study conducted a detection process to distinguish drunk driving from normal driving under simulated driving conditions. The classification was performed by a support vector machine (SVM classifier trained to distinguish between these two classes by integrating both driving performance and physiological measurements. In addition, principal component analysis was conducted to rank the weights of the features. The standard deviation of R–R intervals (SDNN, the root mean square value of the difference of the adjacent R–R interval series (RMSSD, low frequency (LF, high frequency (HF, the ratio of the low and high frequencies (LF/HF, and average blink duration were the highest weighted features in the study. The results show that SVM classification can successfully distinguish drunk driving from normal driving with an accuracy of 70%. The driving performance data and the physiological measurements reported by this paper combined with air-alcohol concentration could be integrated using the support vector regression classification method to establish a better early warning model, thereby improving vehicle safety.

DC Algorithm for Extended Robust Support Vector Machine.

Science.gov (United States)

Fujiwara, Shuhei; Takeda, Akiko; Kanamori, Takafumi

2017-05-01

Nonconvex variants of support vector machines (SVMs) have been developed for various purposes. For example, robust SVMs attain robustness to outliers by using a nonconvex loss function, while extended [Formula: see text]-SVM (E[Formula: see text]-SVM) extends the range of the hyperparameter by introducing a nonconvex constraint. Here, we consider an extended robust support vector machine (ER-SVM), a robust variant of E[Formula: see text]-SVM. ER-SVM combines two types of nonconvexity from robust SVMs and E[Formula: see text]-SVM. Because of the two nonconvexities, the existing algorithm we proposed needs to be divided into two parts depending on whether the hyperparameter value is in the extended range or not. The algorithm also heuristically solves the nonconvex problem in the extended range. In this letter, we propose a new, efficient algorithm for ER-SVM. The algorithm deals with two types of nonconvexity while never entailing more computations than either E[Formula: see text]-SVM or robust SVM, and it finds a critical point of ER-SVM. Furthermore, we show that ER-SVM includes the existing robust SVMs as special cases. Numerical experiments confirm the effectiveness of integrating the two nonconvexities.

Support vector machine: a tool for mapping mineral prospectivity

NARCIS (Netherlands)

Zuo, R.; Carranza, E.J.M

2011-01-01

In this contribution, we describe an application of support vector machine (SVM), a supervised learning algorithm, to mineral prospectivity mapping. The free R package e1071 is used to construct a SVM with sigmoid kernel function to map prospectivity for Au deposits in western Meguma Terrain of Nova

Support vector machines classifiers of physical activities in preschoolers

Science.gov (United States)

The goal of this study is to develop, test, and compare multinomial logistic regression (MLR) and support vector machines (SVM) in classifying preschool-aged children physical activity data acquired from an accelerometer. In this study, 69 children aged 3-5 years old were asked to participate in a s...

Ultrasonic fluid quantity measurement in dynamic vehicular applications a support vector machine approach

CERN Document Server

Terzic, Jenny; Nagarajah, Romesh; Alamgir, Muhammad

2013-01-01

Accurate fluid level measurement in dynamic environments can be assessed using a Support Vector Machine (SVM) approach. SVM is a supervised learning model that analyzes and recognizes patterns. It is a signal classification technique which has far greater accuracy than conventional signal averaging methods. Ultrasonic Fluid Quantity Measurement in Dynamic Vehicular Applications: A Support Vector Machine Approach describes the research and development of a fluid level measurement system for dynamic environments. The measurement system is based on a single ultrasonic sensor. A Support Vector Machines (SVM) based signal characterization and processing system has been developed to compensate for the effects of slosh and temperature variation in fluid level measurement systems used in dynamic environments including automotive applications. It has been demonstrated that a simple ν-SVM model with Radial Basis Function (RBF) Kernel with the inclusion of a Moving Median filter could be used to achieve the high levels...

Online artifact removal for brain-computer interfaces using support vector machines and blind source separation.

Science.gov (United States)

Halder, Sebastian; Bensch, Michael; Mellinger, Jürgen; Bogdan, Martin; Kübler, Andrea; Birbaumer, Niels; Rosenstiel, Wolfgang

2007-01-01

We propose a combination of blind source separation (BSS) and independent component analysis (ICA) (signal decomposition into artifacts and nonartifacts) with support vector machines (SVMs) (automatic classification) that are designed for online usage. In order to select a suitable BSS/ICA method, three ICA algorithms (JADE, Infomax, and FastICA) and one BSS algorithm (AMUSE) are evaluated to determine their ability to isolate electromyographic (EMG) and electrooculographic (EOG) artifacts into individual components. An implementation of the selected BSS/ICA method with SVMs trained to classify EMG and EOG artifacts, which enables the usage of the method as a filter in measurements with online feedback, is described. This filter is evaluated on three BCI datasets as a proof-of-concept of the method.

Implicit Social Trust Dan Support Vector Regression Untuk Sistem Rekomendasi Berita

Directory of Open Access Journals (Sweden)

Melita Widya Ningrum

2018-01-01

Full Text Available Situs berita merupakan salah satu situs yang sering diakses masyarakat karena kemampuannya dalam menyajikan informasi terkini dari berbagai topik seperti olahraga, bisnis, politik, teknologi, kesehatan dan hiburan. Masyarakat dapat mencari dan melihat berita yang sedang populer dari seluruh dunia. Di sisi lain, melimpahnya artikel berita yang tersedia dapat menyulitkan pengguna dalam menemukan artikel berita yang sesuai dengan ketertarikannya. Pemilihan artikel berita yang ditampilkan ke halaman utama pengguna menjadi penting karena dapat meningkatkan minat pengguna untuk membaca artikel berita dari situs tersebut. Selain itu, pemilihan artikel berita yang sesuai dapat meminimalisir terjadinya banjir informasi yang tidak relevan. Dalam pemilihan artikel berita dibutuhkan sistem rekomendasi yang memiliki pengetahuan mengenai ketertarikan atau relevansi pengguna akan topik berita tertentu. Pada penelitian ini, peneliti membuat sistem rekomendasi artikel berita pada New York Times berbasis implicit social trust. Social trust dihasilkan dari interaksi antara pengguna dengan teman-temannya  dan bobot kepercayaan teman pengguna pada media sosial Twitter. Data yang diambil merupakan data pengguna Twitter, teman dan jumlah interaksi antar pengguna berupa retweet. Sistem ini memanfaatkan algoritma Support Vector Regression untuk memberikan estimasi penilaian pengguna terhadap suatu topik tertentu. Hasil pengolahan data dengan Support Vector Regression menunjukkan tingkat akurasi dengan MAPE sebesar 0,8243075902233644%.   Keywords : Twitter, Rekomendasi Berita, Social Trust, Support Vector Regression

Vector control of wind turbine on the basis of the fuzzy selective neural net*

Science.gov (United States)

Engel, E. A.; Kovalev, I. V.; Engel, N. E.

2016-04-01

An article describes vector control of wind turbine based on fuzzy selective neural net. Based on the wind turbine system’s state, the fuzzy selective neural net tracks an maximum power point under random perturbations. Numerical simulations are accomplished to clarify the applicability and advantages of the proposed vector wind turbine’s control on the basis of the fuzzy selective neuronet. The simulation results show that the proposed intelligent control of wind turbine achieves real-time control speed and competitive performance, as compared to a classical control model with PID controllers based on traditional maximum torque control strategy.

Prediction of retention indices for frequently reported compounds of plant essential oils using multiple linear regression, partial least squares, and support vector machine.

Science.gov (United States)

Yan, Jun; Huang, Jian-Hua; He, Min; Lu, Hong-Bing; Yang, Rui; Kong, Bo; Xu, Qing-Song; Liang, Yi-Zeng

2013-08-01

Retention indices for frequently reported compounds of plant essential oils on three different stationary phases were investigated. Multivariate linear regression, partial least squares, and support vector machine combined with a new variable selection approach called random-frog recently proposed by our group, were employed to model quantitative structure-retention relationships. Internal and external validations were performed to ensure the stability and predictive ability. All the three methods could obtain an acceptable model, and the optimal results by support vector machine based on a small number of informative descriptors with the square of correlation coefficient for cross validation, values of 0.9726, 0.9759, and 0.9331 on the dimethylsilicone stationary phase, the dimethylsilicone phase with 5% phenyl groups, and the PEG stationary phase, respectively. The performances of two variable selection approaches, random-frog and genetic algorithm, are compared. The importance of the variables was found to be consistent when estimated from correlation coefficients in multivariate linear regression equations and selection probability in model spaces. © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Implementasi Teknik Seleksi Fitur Pada Klasifikasi Malware Android Menggunakan Support Vector Machine

Directory of Open Access Journals (Sweden)

Hendra Saputra

2018-05-01

Full Text Available Android Malware has grown significantly along with the advance of the times and the increasing variety of technique in the development of Android. Machine Learning technique is a method that now we can use in the modeling the pattern of a static and dynamic feature of Android Malware. In the level of accuracy of the Malware type classification, the researcher connect between the application feature with the feature required by each type of Malware category. The category of malware used is a type of Malware that many circulating today, to classify the type of Malware in this study used Support Vector Machine (SVM. The SVM type will be used is class SVM one against one using the RBF Kernel. The feature will be used in this classification are the Permission and Broadcast Receiver.  To improve the accuracy of the classification result in this study used Feature Selection method. Selection of feature used is Correlation-based Feature Selection (CFS, Gain Ratio (GR and Chi-Square (CHI. A result from Feature Selection will be evaluated together with result that not use Feature Selection. Accuracy Classification Feature Selection CFS result accuracy of 90.83%, GR and CHI of 91.25% and data that not use Feature Selection of 91.67%. The result of testing indicates that permission and broadcast receiver can be used in classifying type of Malware, but the Feature Selection method that used have accuracy is a little below the data that are not using Feature Selection.

The Pattern Recognition in Cattle Brand using Bag of Visual Words and Support Vector Machines Multi-Class

Directory of Open Access Journals (Sweden)

Carlos Silva, Mr

2018-03-01

Full Text Available The recognition images of cattle brand in an automatic way is a necessity to governmental organs responsible for this activity. To help this process, this work presents a method that consists in using Bag of Visual Words for extracting of characteristics from images of cattle brand and Support Vector Machines Multi-Class for classification. This method consists of six stages: a select database of images; b extract points of interest (SURF; c create vocabulary (K-means; d create vector of image characteristics (visual words; e train and sort images (SVM; f evaluate the classification results. The accuracy of the method was tested on database of municipal city hall, where it achieved satisfactory results, reporting 86.02% of accuracy and 56.705 seconds of processing time, respectively.

Structure-activity relationship study of oxindole-based inhibitors of cyclin-dependent kinases based on least-squares support vector machines

International Nuclear Information System (INIS)

Li Jiazhong; Liu Huanxiang; Yao Xiaojun; Liu Mancang; Hu Zhide; Fan Botao

2007-01-01

The least-squares support vector machines (LS-SVMs), as an effective modified algorithm of support vector machine, was used to build structure-activity relationship (SAR) models to classify the oxindole-based inhibitors of cyclin-dependent kinases (CDKs) based on their activity. Each compound was depicted by the structural descriptors that encode constitutional, topological, geometrical, electrostatic and quantum-chemical features. The forward-step-wise linear discriminate analysis method was used to search the descriptor space and select the structural descriptors responsible for activity. The linear discriminant analysis (LDA) and nonlinear LS-SVMs method were employed to build classification models, and the best results were obtained by the LS-SVMs method with prediction accuracy of 100% on the test set and 90.91% for CDK1 and CDK2, respectively, as well as that of LDA models 95.45% and 86.36%. This paper provides an effective method to screen CDKs inhibitors

Investigation of support vector machine for the detection of architectural distortion in mammographic images

International Nuclear Information System (INIS)

Guo, Q; Shao, J; Ruiz, V

2005-01-01

This paper investigates detection of architectural distortion in mammographic images using support vector machine. Hausdorff dimension is used to characterise the texture feature of mammographic images. Support vector machine, a learning machine based on statistical learning theory, is trained through supervised learning to detect architectural distortion. Compared to the Radial Basis Function neural networks, SVM produced more accurate classification results in distinguishing architectural distortion abnormality from normal breast parenchyma

Investigation of support vector machine for the detection of architectural distortion in mammographic images

Energy Technology Data Exchange (ETDEWEB)

Guo, Q [Department of Cybernetics, University of Reading, Reading RG6 6AY (United Kingdom); Shao, J [Department of Electronics, University of Kent at Canterbury, Kent CT2 7NT (United Kingdom); Ruiz, V [Department of Cybernetics, University of Reading, Reading RG6 6AY (United Kingdom)

2005-01-01

This paper investigates detection of architectural distortion in mammographic images using support vector machine. Hausdorff dimension is used to characterise the texture feature of mammographic images. Support vector machine, a learning machine based on statistical learning theory, is trained through supervised learning to detect architectural distortion. Compared to the Radial Basis Function neural networks, SVM produced more accurate classification results in distinguishing architectural distortion abnormality from normal breast parenchyma.

A Wavelet Support Vector Machine Combination Model for Singapore Tourist Arrival to Malaysia

Science.gov (United States)

Rafidah, A.; Shabri, Ani; Nurulhuda, A.; Suhaila, Y.

2017-08-01

In this study, wavelet support vector machine model (WSVM) is proposed and applied for monthly data Singapore tourist time series prediction. The WSVM model is combination between wavelet analysis and support vector machine (SVM). In this study, we have two parts, first part we compare between the kernel function and second part we compare between the developed models with single model, SVM. The result showed that kernel function linear better than RBF while WSVM outperform with single model SVM to forecast monthly Singapore tourist arrival to Malaysia.

Exploiting translational coupling for the selection of cells producing toxic recombinant proteins from expression vectors.

Science.gov (United States)

Tagliavia, Marcello; Cuttitta, Angela

2016-01-01

High rates of plasmid instability are associated with the use of some expression vectors in Escherichia coli, resulting in the loss of recombinant protein expression. This is due to sequence alterations in vector promoter elements caused by the background expression of the cloned gene, which leads to the selection of fast-growing, plasmid-containing cells that do not express the target protein. This phenomenon, which is worsened when expressing toxic proteins, results in preparations containing very little or no recombinant protein, or even in clone loss; however, no methods to prevent loss of recombinant protein expression are currently available. We have exploited the phenomenon of translational coupling, a mechanism of prokaryotic gene expression regulation, in order to select cells containing plasmids still able to express recombinant proteins. Here we designed an expression vector in which the cloned gene and selection marker are co-expressed. Our approach allowed for the selection of the recombinant protein-expressing cells and proved effective even for clones encoding toxic proteins.

Deep neural mapping support vector machines.

Science.gov (United States)

Li, Yujian; Zhang, Ting

2017-09-01

The choice of kernel has an important effect on the performance of a support vector machine (SVM). The effect could be reduced by NEUROSVM, an architecture using multilayer perceptron for feature extraction and SVM for classification. In binary classification, a general linear kernel NEUROSVM can be theoretically simplified as an input layer, many hidden layers, and an SVM output layer. As a feature extractor, the sub-network composed of the input and hidden layers is first trained together with a virtual ordinary output layer by backpropagation, then with the output of its last hidden layer taken as input of the SVM classifier for further training separately. By taking the sub-network as a kernel mapping from the original input space into a feature space, we present a novel model, called deep neural mapping support vector machine (DNMSVM), from the viewpoint of deep learning. This model is also a new and general kernel learning method, where the kernel mapping is indeed an explicit function expressed as a sub-network, different from an implicit function induced by a kernel function traditionally. Moreover, we exploit a two-stage procedure of contrastive divergence learning and gradient descent for DNMSVM to jointly training an adaptive kernel mapping instead of a kernel function, without requirement of kernel tricks. As a whole of the sub-network and the SVM classifier, the joint training of DNMSVM is done by using gradient descent to optimize the objective function with the sub-network layer-wise pre-trained via contrastive divergence learning of restricted Boltzmann machines. Compared to the separate training of NEUROSVM, the joint training is a new algorithm for DNMSVM to have advantages over NEUROSVM. Experimental results show that DNMSVM can outperform NEUROSVM and RBFSVM (i.e., SVM with the kernel of radial basis function), demonstrating its effectiveness. Copyright © 2017 Elsevier Ltd. All rights reserved.

Estimating transmitted waves of floating breakwater using support vector regression model

Digital Repository Service at National Institute of Oceanography (India)

Mandal, S.; Hegde, A.V.; Kumar, V.; Patil, S.G.

is first mapped onto an m-dimensional feature space using some fixed (nonlinear) mapping, and then a linear model is constructed in this feature space (Ivanciuc Ovidiu 2007). Using mathematical notation, the linear model in the feature space f(x, w... regressive vector machines, Ocean Engineering Journal, Vol – 36, pp 339 – 347, 2009. 3. Ivanciuc Ovidiu, Applications of support vector machines in chemistry, Review in Computational Chemistry, Eds K. B. Lipkouitz and T. R. Cundari, Vol – 23...

General Dimensional Multiple-Output Support Vector Regressions and Their Multiple Kernel Learning.

Science.gov (United States)

Chung, Wooyong; Kim, Jisu; Lee, Heejin; Kim, Euntai

2015-11-01

Support vector regression has been considered as one of the most important regression or function approximation methodologies in a variety of fields. In this paper, two new general dimensional multiple output support vector regressions (MSVRs) named SOCPL1 and SOCPL2 are proposed. The proposed methods are formulated in the dual space and their relationship with the previous works is clearly investigated. Further, the proposed MSVRs are extended into the multiple kernel learning and their training is implemented by the off-the-shelf convex optimization tools. The proposed MSVRs are applied to benchmark problems and their performances are compared with those of the previous methods in the experimental section.

Using support vector machines to improve elemental ion identification in macromolecular crystal structures

Energy Technology Data Exchange (ETDEWEB)

Morshed, Nader [University of California, Berkeley, CA 94720 (United States); Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Echols, Nathaniel, E-mail: nechols@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Adams, Paul D., E-mail: nechols@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); University of California, Berkeley, CA 94720 (United States)

2015-05-01

A method to automatically identify possible elemental ions in X-ray crystal structures has been extended to use support vector machine (SVM) classifiers trained on selected structures in the PDB, with significantly improved sensitivity over manually encoded heuristics. In the process of macromolecular model building, crystallographers must examine electron density for isolated atoms and differentiate sites containing structured solvent molecules from those containing elemental ions. This task requires specific knowledge of metal-binding chemistry and scattering properties and is prone to error. A method has previously been described to identify ions based on manually chosen criteria for a number of elements. Here, the use of support vector machines (SVMs) to automatically classify isolated atoms as either solvent or one of various ions is described. Two data sets of protein crystal structures, one containing manually curated structures deposited with anomalous diffraction data and another with automatically filtered, high-resolution structures, were constructed. On the manually curated data set, an SVM classifier was able to distinguish calcium from manganese, zinc, iron and nickel, as well as all five of these ions from water molecules, with a high degree of accuracy. Additionally, SVMs trained on the automatically curated set of high-resolution structures were able to successfully classify most common elemental ions in an independent validation test set. This method is readily extensible to other elemental ions and can also be used in conjunction with previous methods based on a priori expectations of the chemical environment and X-ray scattering.

Unsteady aerodynamic modeling at high angles of attack using support vector machines

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Wang Qing

2015-06-01

Full Text Available Accurate aerodynamic models are the basis of flight simulation and control law design. Mathematically modeling unsteady aerodynamics at high angles of attack bears great difficulties in model structure determination and parameter estimation due to little understanding of the flow mechanism. Support vector machines (SVMs based on statistical learning theory provide a novel tool for nonlinear system modeling. The work presented here examines the feasibility of applying SVMs to high angle-of-attack unsteady aerodynamic modeling field. Mainly, after a review of SVMs, several issues associated with unsteady aerodynamic modeling by use of SVMs are discussed in detail, such as selection of input variables, selection of output variables and determination of SVM parameters. The least squares SVM (LS-SVM models are set up from certain dynamic wind tunnel test data of a delta wing and an aircraft configuration, and then used to predict the aerodynamic responses in other tests. The predictions are in good agreement with the test data, which indicates the satisfying learning and generalization performance of LS-SVMs.

Fault diagnosis of direct-drive wind turbine based on support vector machine

International Nuclear Information System (INIS)

An, X L; Jiang, D X; Li, S H; Chen, J

2011-01-01

A fault diagnosis method of direct-drive wind turbine based on support vector machine (SVM) and feature selection is presented. The time-domain feature parameters of main shaft vibration signal in the horizontal and vertical directions are considered in the method. Firstly, in laboratory scale five experiments of direct-drive wind turbine with normal condition, wind wheel mass imbalance fault, wind wheel aerodynamic imbalance fault, yaw fault and blade airfoil change fault are carried out. The features of five experiments are analyzed. Secondly, the sensitive time-domain feature parameters in the horizontal and vertical directions of vibration signal in the five conditions are selected and used as feature samples. By training, the mapping relation between feature parameters and fault types are established in SVM model. Finally, the performance of the proposed method is verified through experimental data. The results show that the proposed method is effective in identifying the fault of wind turbine. It has good classification ability and robustness to diagnose the fault of direct-drive wind turbine.

Novel qsar combination forecast model for insect repellent coupling support vector regression and k-nearest-neighbor

International Nuclear Information System (INIS)

Wang, L.F.; Bai, L.Y.

2013-01-01

To improve the precision of quantitative structure-activity relationship (QSAR) modeling for aromatic carboxylic acid derivatives insect repellent, a novel nonlinear combination forecast model was proposed integrating support vector regression (SVR) and K-nearest neighbor (KNN): Firstly, search optimal kernel function and nonlinearly select molecular descriptors by the rule of minimum MSE value using SVR. Secondly, illuminate the effects of all descriptors on biological activity by multi-round enforcement resistance-selection. Thirdly, construct the sub-models with predicted values of different KNN. Then, get the optimal kernel and corresponding retained sub-models through subtle selection. Finally, make prediction with leave-one-out (LOO) method in the basis of reserved sub-models. Compared with previous widely used models, our work shows significant improvement in modeling performance, which demonstrates the superiority of the present combination forecast model. (author)

Active damage detection method based on support vector machine and impulse response

International Nuclear Information System (INIS)

Taniguchi, Ryuta; Mita, Akira

2004-01-01

An active damage detection method was proposed to characterize damage in bolted joints. The purpose of this study is to propose a damage detection method that can obtain the detailed information of the damage by creating feature vectors for pattern recognition. In the proposed method, the wavelet transform is applied to the sensor signals, and the feature vectors are defined by second power average of the amplitude. The feature vectors generated by experiments were successfully used as the training data for Support Vector Machine (SVM). By applying the wavelet transform to time-frequency analysis, the accuracy of pattern recognition was raised in both correlation coefficient and SVM applications. Moreover, the SVM could identify the damage with very strong discernment capability than others. Applicability of the proposed method was successfully demonstrated. (author)

SYN Flood Attack Detection in Cloud Computing using Support Vector Machine

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Zerina Mašetić

2017-11-01

Full Text Available Cloud computing is a trending technology, as it reduces the cost of running a business. However, many companies are skeptic moving about towards cloud due to the security concerns. Based on the Cloud Security Alliance report, Denial of Service (DoS attacks are among top 12 attacks in the cloud computing. Therefore, it is important to develop a mechanism for detection and prevention of these attacks. The aim of this paper is to evaluate Support Vector Machine (SVM algorithm in creating the model for classification of DoS attacks and normal network behaviors. The study was performed in several phases: a attack simulation, b data collection, cfeature selection, and d classification. The proposedmodel achieved 100% classification accuracy with true positive rate (TPR of 100%. SVM showed outstanding performance in DoS attack detection and proves that it serves as a valuable asset in the network security area.

A Conjunction Method of Wavelet Transform-Particle Swarm Optimization-Support Vector Machine for Streamflow Forecasting

Directory of Open Access Journals (Sweden)

Fanping Zhang

2014-01-01

Full Text Available Streamflow forecasting has an important role in water resource management and reservoir operation. Support vector machine (SVM is an appropriate and suitable method for streamflow prediction due to its best versatility, robustness, and effectiveness. In this study, a wavelet transform particle swarm optimization support vector machine (WT-PSO-SVM model is proposed and applied for streamflow time series prediction. Firstly, the streamflow time series were decomposed into various details (Ds and an approximation (A3 at three resolution levels (21-22-23 using Daubechies (db3 discrete wavelet. Correlation coefficients between each D subtime series and original monthly streamflow time series are calculated. Ds components with high correlation coefficients (D3 are added to the approximation (A3 as the input values of the SVM model. Secondly, the PSO is employed to select the optimal parameters, C, ε, and σ, of the SVM model. Finally, the WT-PSO-SVM models are trained and tested by the monthly streamflow time series of Tangnaihai Station located in Yellow River upper stream from January 1956 to December 2008. The test results indicate that the WT-PSO-SVM approach provide a superior alternative to the single SVM model for forecasting monthly streamflow in situations without formulating models for internal structure of the watershed.

Gateway binary vectors with the bialaphos resistance gene, bar, as a selection marker for plant transformation.

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Nakamura, Shinya; Mano, Shoji; Tanaka, Yuji; Ohnishi, Masato; Nakamori, Chihiro; Araki, Masami; Niwa, Tomoko; Nishimura, Mikio; Kaminaka, Hironori; Nakagawa, Tsuyoshi; Sato, Yutaka; Ishiguro, Sumie

2010-01-01

We constructed two series of Gateway binary vectors, pGWBs and R4pGWBs, possessing the bialaphos resistance gene (bar) as a selection marker for plant transformation. The reporters and tags employed in this system are sGFP, GUS, LUC, EYFP, ECFP, G3GFP, mRFP, TagRFP, 6xHis, FLAG, 3xHA, 4xMyc, 10xMyc, GST, T7 and TAP. Selection of Arabidopsis transformants with BASTA was successfully carried out using both plate-grown and soil-grown seedlings. Transformed rice calli and suspension-cultured tobacco cells were selected on plates containing BASTA or glufosinate-ammonium. These vectors are compatible with existing pGWB and R4pGWB vectors carrying kanamycin and hygromycin B resistance.

Modeling and prediction of flotation performance using support vector regression

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Despotović Vladimir

2017-01-01

Full Text Available Continuous efforts have been made in recent year to improve the process of paper recycling, as it is of critical importance for saving the wood, water and energy resources. Flotation deinking is considered to be one of the key methods for separation of ink particles from the cellulose fibres. Attempts to model the flotation deinking process have often resulted in complex models that are difficult to implement and use. In this paper a model for prediction of flotation performance based on Support Vector Regression (SVR, is presented. Representative data samples were created in laboratory, under a variety of practical control variables for the flotation deinking process, including different reagents, pH values and flotation residence time. Predictive model was created that was trained on these data samples, and the flotation performance was assessed showing that Support Vector Regression is a promising method even when dataset used for training the model is limited.

Prediction of Spirometric Forced Expiratory Volume (FEV1) Data Using Support Vector Regression

Science.gov (United States)

Kavitha, A.; Sujatha, C. M.; Ramakrishnan, S.

2010-01-01

In this work, prediction of forced expiratory volume in 1 second (FEV1) in pulmonary function test is carried out using the spirometer and support vector regression analysis. Pulmonary function data are measured with flow volume spirometer from volunteers (N=175) using a standard data acquisition protocol. The acquired data are then used to predict FEV1. Support vector machines with polynomial kernel function with four different orders were employed to predict the values of FEV1. The performance is evaluated by computing the average prediction accuracy for normal and abnormal cases. Results show that support vector machines are capable of predicting FEV1 in both normal and abnormal cases and the average prediction accuracy for normal subjects was higher than that of abnormal subjects. Accuracy in prediction was found to be high for a regularization constant of C=10. Since FEV1 is the most significant parameter in the analysis of spirometric data, it appears that this method of assessment is useful in diagnosing the pulmonary abnormalities with incomplete data and data with poor recording.

Prolonged Integration Site Selection of a Lentiviral Vector in the Genome of Human Keratinocytes.

Science.gov (United States)

Qian, Wei; Wang, Yong; Li, Rui-Fu; Zhou, Xin; Liu, Jing; Peng, Dai-Zhi

2017-03-03

BACKGROUND Lentiviral vectors have been successfully used for human skin cell gene transfer studies. Defining the selection of integration sites for retroviral vectors in the host genome is crucial in risk assessment analysis of gene therapy. However, genome-wide analyses of lentiviral integration sites in human keratinocytes, especially after prolonged growth, are poorly understood. MATERIAL AND METHODS In this study, 874 unique lentiviral vector integration sites in human HaCaT keratinocytes after long-term culture were identified and analyzed with the online tool GTSG-QuickMap and SPSS software. RESULTS The data indicated that lentiviral vectors showed integration site preferences for genes and gene-rich regions. CONCLUSIONS This study will likely assist in determining the relative risks of the lentiviral vector system and in the design of a safe lentiviral vector system in the gene therapy of skin diseases.

Quantum optimization for training support vector machines.

Science.gov (United States)

Anguita, Davide; Ridella, Sandro; Rivieccio, Fabio; Zunino, Rodolfo

2003-01-01

Refined concepts, such as Rademacher estimates of model complexity and nonlinear criteria for weighting empirical classification errors, represent recent and promising approaches to characterize the generalization ability of Support Vector Machines (SVMs). The advantages of those techniques lie in both improving the SVM representation ability and yielding tighter generalization bounds. On the other hand, they often make Quadratic-Programming algorithms no longer applicable, and SVM training cannot benefit from efficient, specialized optimization techniques. The paper considers the application of Quantum Computing to solve the problem of effective SVM training, especially in the case of digital implementations. The presented research compares the behavioral aspects of conventional and enhanced SVMs; experiments in both a synthetic and real-world problems support the theoretical analysis. At the same time, the related differences between Quadratic-Programming and Quantum-based optimization techniques are considered.

Construction and applications of exon-trapping gene-targeting vectors with a novel strategy for negative selection.

Science.gov (United States)

Saito, Shinta; Ura, Kiyoe; Kodama, Miho; Adachi, Noritaka

2015-06-30

Targeted gene modification by homologous recombination provides a powerful tool for studying gene function in cells and animals. In higher eukaryotes, non-homologous integration of targeting vectors occurs several orders of magnitude more frequently than does targeted integration, making the gene-targeting technology highly inefficient. For this reason, negative-selection strategies have been employed to reduce the number of drug-resistant clones associated with non-homologous vector integration, particularly when artificial nucleases to introduce a DNA break at the target site are unavailable or undesirable. As such, an exon-trap strategy using a promoterless drug-resistance marker gene provides an effective way to counterselect non-homologous integrants. However, constructing exon-trapping targeting vectors has been a time-consuming and complicated process. By virtue of highly efficient att-mediated recombination, we successfully developed a simple and rapid method to construct plasmid-based vectors that allow for exon-trapping gene targeting. These exon-trap vectors were useful in obtaining correctly targeted clones in mouse embryonic stem cells and human HT1080 cells. Most importantly, with the use of a conditionally cytotoxic gene, we further developed a novel strategy for negative selection, thereby enhancing the efficiency of counterselection for non-homologous integration of exon-trap vectors. Our methods will greatly facilitate exon-trapping gene-targeting technologies in mammalian cells, particularly when combined with the novel negative selection strategy.

Comparison of ν-support vector regression and logistic equation for ...

African Journals Online (AJOL)

Due to the complexity and high non-linearity of bioprocess, most simple mathematical models fail to describe the exact behavior of biochemistry systems. As a novel type of learning method, support vector regression (SVR) owns the powerful capability to characterize problems via small sample, nonlinearity, high dimension ...

Predicting Complexation Thermodynamic Parameters of β-Cyclodextrin with Chiral Guests by Using Swarm Intelligence and Support Vector Machines

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Luckhana Lawtrakul

2009-05-01

Full Text Available The Particle Swarm Optimization (PSO and Support Vector Machines (SVMs approaches are used for predicting the thermodynamic parameters for the 1:1 inclusion complexation of chiral guests with β-cyclodextrin. A PSO is adopted for descriptor selection in the quantitative structure-property relationships (QSPR of a dataset of 74 chiral guests due to its simplicity, speed, and consistency. The modified PSO is then combined with SVMs for its good approximating properties, to generate a QSPR model with the selected features. Linear, polynomial, and Gaussian radial basis functions are used as kernels in SVMs. All models have demonstrated an impressive performance with R2 higher than 0.8.

Soft-sensing model of temperature for aluminum reduction cell on improved twin support vector regression

Science.gov (United States)

Li, Tao

2018-06-01

The complexity of aluminum electrolysis process leads the temperature for aluminum reduction cells hard to measure directly. However, temperature is the control center of aluminum production. To solve this problem, combining some aluminum plant's practice data, this paper presents a Soft-sensing model of temperature for aluminum electrolysis process on Improved Twin Support Vector Regression (ITSVR). ITSVR eliminates the slow learning speed of Support Vector Regression (SVR) and the over-fit risk of Twin Support Vector Regression (TSVR) by introducing a regularization term into the objective function of TSVR, which ensures the structural risk minimization principle and lower computational complexity. Finally, the model with some other parameters as auxiliary variable, predicts the temperature by ITSVR. The simulation result shows Soft-sensing model based on ITSVR has short time-consuming and better generalization.

Failure prognostics by support vector regression of time series data under stationary/nonstationary environmental and operational conditions

International Nuclear Information System (INIS)

Liu, Jie

2015-01-01

This Ph. D. work is motivated by the possibility of monitoring the conditions of components of energy systems for their extended and safe use, under proper practice of operation and adequate policies of maintenance. The aim is to develop a Support Vector Regression (SVR)-based framework for predicting time series data under stationary/nonstationary environmental and operational conditions. Single SVR and SVR-based ensemble approaches are developed to tackle the prediction problem based on both small and large datasets. Strategies are proposed for adaptively updating the single SVR and SVR-based ensemble models in the existence of pattern drifts. Comparisons with other online learning approaches for kernel-based modelling are provided with reference to time series data from a critical component in Nuclear Power Plants (NPPs) provided by Electricite de France (EDF). The results show that the proposed approaches achieve comparable prediction results, considering the Mean Squared Error (MSE) and Mean Relative Error (MRE), in much less computation time. Furthermore, by analyzing the geometrical meaning of the Feature Vector Selection (FVS) method proposed in the literature, a novel geometrically interpretable kernel method, named Reduced Rank Kernel Ridge Regression-II (RRKRR-II), is proposed to describe the linear relations between a predicted value and the predicted values of the Feature Vectors (FVs) selected by FVS. Comparisons with several kernel methods on a number of public datasets prove the good prediction accuracy and the easy-of-tuning of the hyper-parameters of RRKRR-II. (author)

Acoustic Biometric System Based on Preprocessing Techniques and Linear Support Vector Machines.

Science.gov (United States)

del Val, Lara; Izquierdo-Fuente, Alberto; Villacorta, Juan J; Raboso, Mariano

2015-06-17

Drawing on the results of an acoustic biometric system based on a MSE classifier, a new biometric system has been implemented. This new system preprocesses acoustic images, extracts several parameters and finally classifies them, based on Support Vector Machine (SVM). The preprocessing techniques used are spatial filtering, segmentation-based on a Gaussian Mixture Model (GMM) to separate the person from the background, masking-to reduce the dimensions of images-and binarization-to reduce the size of each image. An analysis of classification error and a study of the sensitivity of the error versus the computational burden of each implemented algorithm are presented. This allows the selection of the most relevant algorithms, according to the benefits required by the system. A significant improvement of the biometric system has been achieved by reducing the classification error, the computational burden and the storage requirements.

Using a Feature Subset Selection method and Support Vector Machine to address curse of dimensionality and redundancy in Hyperion hyperspectral data classification

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Amir Salimi

2018-04-01

Full Text Available The curse of dimensionality resulted from insufficient training samples and redundancy is considered as an important problem in the supervised classification of hyperspectral data. This problem can be handled by Feature Subset Selection (FSS methods and Support Vector Machine (SVM. The FSS methods can manage the redundancy by removing redundant spectral bands. Moreover, kernel based methods, especially SVM have a high ability to classify limited-sample data sets. This paper mainly aims to assess the capability of a FSS method and the SVM in curse of dimensional circumstances and to compare results with the Artificial Neural Network (ANN, when they are used to classify alteration zones of the Hyperion hyperspectral image acquired from the greatest Iranian porphyry copper complex. The results demonstrated that by decreasing training samples, the accuracy of SVM was just decreased 1.8% while the accuracy of ANN was highly reduced i.e. 14.01%. In addition, a hybrid FSS was applied to reduce the dimension of Hyperion. Accordingly, among the 165 useable spectral bands of Hyperion, 18 bands were only selected as the most important and informative bands. Although this dimensionality reduction could not intensively improve the performance of SVM, ANN revealed a significant improvement in the computational time and a slightly enhancement in the average accuracy. Therefore, SVM as a low-sensitive method respect to the size of training data set and feature space can be applied to classify the curse of dimensional problems. Also, the FSS methods can improve the performance of non-kernel based classifiers by eliminating redundant features. Keywords: Curse of dimensionality, Feature Subset Selection, Hydrothermal alteration, Hyperspectral, SVM

Slope Deformation Prediction Based on Support Vector Machine

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Lei JIA

2013-07-01

Full Text Available This paper principally studies the prediction of slope deformation based on Support Vector Machine (SVM. In the prediction process，explore how to reconstruct the phase space. The geological body’s displacement data obtained from chaotic time series are used as SVM’s training samples. Slope displacement caused by multivariable coupling is predicted by means of single variable. Results show that this model is of high fitting accuracy and generalization, and provides reference for deformation prediction in slope engineering.

Vector-model-supported optimization in volumetric-modulated arc stereotactic radiotherapy planning for brain metastasis

International Nuclear Information System (INIS)

Liu, Eva Sau Fan; Wu, Vincent Wing Cheung; Harris, Benjamin; Foote, Matthew; Lehman, Margot; Chan, Lawrence Wing Chi

2017-01-01

Long planning time in volumetric-modulated arc stereotactic radiotherapy (VMA-SRT) cases can limit its clinical efficiency and use. A vector model could retrieve previously successful radiotherapy cases that share various common anatomic features with the current case. The prsent study aimed to develop a vector model that could reduce planning time by applying the optimization parameters from those retrieved reference cases. Thirty-six VMA-SRT cases of brain metastasis (gender, male [n = 23], female [n = 13]; age range, 32 to 81 years old) were collected and used as a reference database. Another 10 VMA-SRT cases were planned with both conventional optimization and vector-model-supported optimization, following the oncologists' clinical dose prescriptions. Planning time and plan quality measures were compared using the 2-sided paired Wilcoxon signed rank test with a significance level of 0.05, with positive false discovery rate (pFDR) of less than 0.05. With vector-model-supported optimization, there was a significant reduction in the median planning time, a 40% reduction from 3.7 to 2.2 hours (p = 0.002, pFDR = 0.032), and for the number of iterations, a 30% reduction from 8.5 to 6.0 (p = 0.006, pFDR = 0.047). The quality of plans from both approaches was comparable. From these preliminary results, vector-model-supported optimization can expedite the optimization of VMA-SRT for brain metastasis while maintaining plan quality.

Vector-model-supported optimization in volumetric-modulated arc stereotactic radiotherapy planning for brain metastasis

Energy Technology Data Exchange (ETDEWEB)

Liu, Eva Sau Fan [Department of Radiation Oncology, Princess Alexandra Hospital, Brisbane (Australia); Department of Health Technology and Informatics, The Hong Kong Polytechnic University (Hong Kong); Wu, Vincent Wing Cheung [Department of Health Technology and Informatics, The Hong Kong Polytechnic University (Hong Kong); Harris, Benjamin [Department of Radiation Oncology, Princess Alexandra Hospital, Brisbane (Australia); Foote, Matthew; Lehman, Margot [Department of Radiation Oncology, Princess Alexandra Hospital, Brisbane (Australia); School of Medicine, University of Queensland (Australia); Chan, Lawrence Wing Chi, E-mail: wing.chi.chan@polyu.edu.hk [Department of Health Technology and Informatics, The Hong Kong Polytechnic University (Hong Kong)

2017-07-01

Long planning time in volumetric-modulated arc stereotactic radiotherapy (VMA-SRT) cases can limit its clinical efficiency and use. A vector model could retrieve previously successful radiotherapy cases that share various common anatomic features with the current case. The prsent study aimed to develop a vector model that could reduce planning time by applying the optimization parameters from those retrieved reference cases. Thirty-six VMA-SRT cases of brain metastasis (gender, male [n = 23], female [n = 13]; age range, 32 to 81 years old) were collected and used as a reference database. Another 10 VMA-SRT cases were planned with both conventional optimization and vector-model-supported optimization, following the oncologists' clinical dose prescriptions. Planning time and plan quality measures were compared using the 2-sided paired Wilcoxon signed rank test with a significance level of 0.05, with positive false discovery rate (pFDR) of less than 0.05. With vector-model-supported optimization, there was a significant reduction in the median planning time, a 40% reduction from 3.7 to 2.2 hours (p = 0.002, pFDR = 0.032), and for the number of iterations, a 30% reduction from 8.5 to 6.0 (p = 0.006, pFDR = 0.047). The quality of plans from both approaches was comparable. From these preliminary results, vector-model-supported optimization can expedite the optimization of VMA-SRT for brain metastasis while maintaining plan quality.

Support Vector Data Description Model to Map Specific Land Cover with Optimal Parameters Determined from a Window-Based Validation Set

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Jinshui Zhang

2017-04-01

Full Text Available This paper developed an approach, the window-based validation set for support vector data description (WVS-SVDD, to determine optimal parameters for support vector data description (SVDD model to map specific land cover by integrating training and window-based validation sets. Compared to the conventional approach where the validation set included target and outlier pixels selected visually and randomly, the validation set derived from WVS-SVDD constructed a tightened hypersphere because of the compact constraint by the outlier pixels which were located neighboring to the target class in the spectral feature space. The overall accuracies for wheat and bare land achieved were as high as 89.25% and 83.65%, respectively. However, target class was underestimated because the validation set covers only a small fraction of the heterogeneous spectra of the target class. The different window sizes were then tested to acquire more wheat pixels for validation set. The results showed that classification accuracy increased with the increasing window size and the overall accuracies were higher than 88% at all window size scales. Moreover, WVS-SVDD showed much less sensitivity to the untrained classes than the multi-class support vector machine (SVM method. Therefore, the developed method showed its merits using the optimal parameters, tradeoff coefficient (C and kernel width (s, in mapping homogeneous specific land cover.

A framework for multiple kernel support vector regression and its applications to siRNA efficacy prediction.

Science.gov (United States)

Qiu, Shibin; Lane, Terran

2009-01-01

The cell defense mechanism of RNA interference has applications in gene function analysis and promising potentials in human disease therapy. To effectively silence a target gene, it is desirable to select appropriate initiator siRNA molecules having satisfactory silencing capabilities. Computational prediction for silencing efficacy of siRNAs can assist this screening process before using them in biological experiments. String kernel functions, which operate directly on the string objects representing siRNAs and target mRNAs, have been applied to support vector regression for the prediction and improved accuracy over numerical kernels in multidimensional vector spaces constructed from descriptors of siRNA design rules. To fully utilize information provided by string and numerical data, we propose to unify the two in a kernel feature space by devising a multiple kernel regression framework where a linear combination of the kernels is used. We formulate the multiple kernel learning into a quadratically constrained quadratic programming (QCQP) problem, which although yields global optimal solution, is computationally demanding and requires a commercial solver package. We further propose three heuristics based on the principle of kernel-target alignment and predictive accuracy. Empirical results demonstrate that multiple kernel regression can improve accuracy, decrease model complexity by reducing the number of support vectors, and speed up computational performance dramatically. In addition, multiple kernel regression evaluates the importance of constituent kernels, which for the siRNA efficacy prediction problem, compares the relative significance of the design rules. Finally, we give insights into the multiple kernel regression mechanism and point out possible extensions.

Applying Multi-Class Support Vector Machines for performance assessment of shipping operations: The case of tanker vessels

DEFF Research Database (Denmark)

Pagoropoulos, Aris; Møller, Anders H.; McAloone, Tim C.

2017-01-01

of feature selection algorithms. Afterwards, a model based on Multi- Class Support Vector Machines (SVM) was constructed and the efficacy of the approach is shown through the application of a test set. The results demonstrate the importance and benefits of machine learning algorithms in driving energy....... Identifying the potential of behavioural savings can be challenging, due to the inherent difficulty in analysing the data and operationalizing energy efficiency within the dynamic operating environment of the vessels. This article proposes a supervised learning model for identifying the presence of energy...

Dual linear structured support vector machine tracking method via scale correlation filter

Science.gov (United States)

Li, Weisheng; Chen, Yanquan; Xiao, Bin; Feng, Chen

2018-01-01

Adaptive tracking-by-detection methods based on structured support vector machine (SVM) performed well on recent visual tracking benchmarks. However, these methods did not adopt an effective strategy of object scale estimation, which limits the overall tracking performance. We present a tracking method based on a dual linear structured support vector machine (DLSSVM) with a discriminative scale correlation filter. The collaborative tracker comprised of a DLSSVM model and a scale correlation filter obtains good results in tracking target position and scale estimation. The fast Fourier transform is applied for detection. Extensive experiments show that our tracking approach outperforms many popular top-ranking trackers. On a benchmark including 100 challenging video sequences, the average precision of the proposed method is 82.8%.

Differentiation of Glioblastoma and Lymphoma Using Feature Extraction and Support Vector Machine.

Science.gov (United States)

Yang, Zhangjing; Feng, Piaopiao; Wen, Tian; Wan, Minghua; Hong, Xunning

2017-01-01

Differentiation of glioblastoma multiformes (GBMs) and lymphomas using multi-sequence magnetic resonance imaging (MRI) is an important task that is valuable for treatment planning. However, this task is a challenge because GBMs and lymphomas may have a similar appearance in MRI images. This similarity may lead to misclassification and could affect the treatment results. In this paper, we propose a semi-automatic method based on multi-sequence MRI to differentiate these two types of brain tumors. Our method consists of three steps: 1) the key slice is selected from 3D MRIs and region of interests (ROIs) are drawn around the tumor region; 2) different features are extracted based on prior clinical knowledge and validated using a t-test; and 3) features that are helpful for classification are used to build an original feature vector and a support vector machine is applied to perform classification. In total, 58 GBM cases and 37 lymphoma cases are used to validate our method. A leave-one-out crossvalidation strategy is adopted in our experiments. The global accuracy of our method was determined as 96.84%, which indicates that our method is effective for the differentiation of GBM and lymphoma and can be applied in clinical diagnosis. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

Stroke localization and classification using microwave tomography with k-means clustering and support vector machine.

Science.gov (United States)

Guo, Lei; Abbosh, Amin

2018-05-01

For any chance for stroke patients to survive, the stroke type should be classified to enable giving medication within a few hours of the onset of symptoms. In this paper, a microwave-based stroke localization and classification framework is proposed. It is based on microwave tomography, k-means clustering, and a support vector machine (SVM) method. The dielectric profile of the brain is first calculated using the Born iterative method, whereas the amplitude of the dielectric profile is then taken as the input to k-means clustering. The cluster is selected as the feature vector for constructing and testing the SVM. A database of MRI-derived realistic head phantoms at different signal-to-noise ratios is used in the classification procedure. The performance of the proposed framework is evaluated using the receiver operating characteristic (ROC) curve. The results based on a two-dimensional framework show that 88% classification accuracy, with a sensitivity of 91% and a specificity of 87%, can be achieved. Bioelectromagnetics. 39:312-324, 2018. © 2018 Wiley Periodicals, Inc. © 2018 Wiley Periodicals, Inc.

Support vector machines in analysis of top quark production

International Nuclear Information System (INIS)

Vaiciulis, A.

2003-01-01

The Support Vector Machine (SVM) learning algorithm is a new alternative to multivariate methods such as neural networks. Potential applications of SVMs in high energy physics include the common classification problem of signal/background discrimination as well as particle identification. A comparison of a conventional method and an SVM algorithm is presented here for the case of identifying top quark events in Run II physics at the CDF experiment

Oblique decision trees using embedded support vector machines in classifier ensembles

NARCIS (Netherlands)

Menkovski, V.; Christou, I.; Efremidis, S.

2008-01-01

Classifier ensembles have emerged in recent years as a promising research area for boosting pattern recognition systems' performance. We present a new base classifier that utilizes oblique decision tree technology based on support vector machines for the construction of oblique (non-axis parallel)

Quantitative structure–activity relationship model for amino acids as corrosion inhibitors based on the support vector machine and molecular design

International Nuclear Information System (INIS)

Zhao, Hongxia; Zhang, Xiuhui; Ji, Lin; Hu, Haixiang; Li, Qianshu

2014-01-01

Highlights: • Nonlinear quantitative structure–activity relationship (QSAR) model was built by the support vector machine. • Descriptors for QSAR model were selected by principal component analysis. • Binding energy was taken as one of the descriptors for QSAR model. • Acidic solution and protonation of the inhibitor were considered. - Abstract: The inhibition performance of nineteen amino acids was studied by theoretical methods. The affection of acidic solution and protonation of inhibitor were considered in molecular dynamics simulation and the results indicated that the protonated amino-group was not adsorbed on Fe (1 1 0) surface. Additionally, a nonlinear quantitative structure–activity relationship (QSAR) model was built by the support vector machine. The correlation coefficient was 0.97 and the root mean square error, the differences between predicted and experimental inhibition efficiencies (%), was 1.48. Furthermore, five new amino acids were theoretically designed and their inhibition efficiencies were predicted by the built QSAR model

Application of higher order spectral features and support vector machines for bearing faults classification.

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Saidi, Lotfi; Ben Ali, Jaouher; Fnaiech, Farhat

2015-01-01

Condition monitoring and fault diagnosis of rolling element bearings timely and accurately are very important to ensure the reliability of rotating machinery. This paper presents a novel pattern classification approach for bearings diagnostics, which combines the higher order spectra analysis features and support vector machine classifier. The use of non-linear features motivated by the higher order spectra has been reported to be a promising approach to analyze the non-linear and non-Gaussian characteristics of the mechanical vibration signals. The vibration bi-spectrum (third order spectrum) patterns are extracted as the feature vectors presenting different bearing faults. The extracted bi-spectrum features are subjected to principal component analysis for dimensionality reduction. These principal components were fed to support vector machine to distinguish four kinds of bearing faults covering different levels of severity for each fault type, which were measured in the experimental test bench running under different working conditions. In order to find the optimal parameters for the multi-class support vector machine model, a grid-search method in combination with 10-fold cross-validation has been used. Based on the correct classification of bearing patterns in the test set, in each fold the performance measures are computed. The average of these performance measures is computed to report the overall performance of the support vector machine classifier. In addition, in fault detection problems, the performance of a detection algorithm usually depends on the trade-off between robustness and sensitivity. The sensitivity and robustness of the proposed method are explored by running a series of experiments. A receiver operating characteristic (ROC) curve made the results more convincing. The results indicated that the proposed method can reliably identify different fault patterns of rolling element bearings based on vibration signals. Copyright © 2014 ISA

Subspace identification of Hammer stein models using support vector machines

International Nuclear Information System (INIS)

Al-Dhaifallah, Mujahed

2011-01-01

System identification is the art of finding mathematical tools and algorithms that build an appropriate mathematical model of a system from measured input and output data. Hammerstein model, consisting of a memoryless nonlinearity followed by a dynamic linear element, is often a good trade-off as it can represent some dynamic nonlinear systems very accurately, but is nonetheless quite simple. Moreover, the extensive knowledge about LTI system representations can be applied to the dynamic linear block. On the other hand, finding an effective representation for the nonlinearity is an active area of research. Recently, support vector machines (SVMs) and least squares support vector machines (LS-SVMs) have demonstrated powerful abilities in approximating linear and nonlinear functions. In contrast with other approximation methods, SVMs do not require a-priori structural information. Furthermore, there are well established methods with guaranteed convergence (ordinary least squares, quadratic programming) for fitting LS-SVMs and SVMs. The general objective of this research is to develop new subspace algorithms for Hammerstein systems based on SVM regression.

Establishment of the Credit Indicator System of Micro Enterprises Based on Support Vector Machine and R-Type Clustering

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Zhanjiang Li

2018-01-01

Full Text Available The micro enterprises’ credit indicators with credit identification ability are selected by the two classification models of Support Vector Machine for the first round of indicator selection and then for the second round of indicator selection, deleting credit indicators with redundant information by clustering variables through the principle of minimum sum of deviation squares. This paper provides a screening model for credit evaluation indicators of micro enterprises and uses credit data of 860 micro enterprises samples in Inner Mongolia in western China for application analysis. The test results show that, first, the constructed final micro enterprises’ credit indicator system is in line with the 5C model; second, the validity test based on the ROC (Receiver Operating Characteristic curve reveals that each of the screened credit evaluation indicators is valid.

Combining extreme learning machines using support vector machines for breast tissue classification.

Science.gov (United States)

Daliri, Mohammad Reza

2015-01-01

In this paper, we present a new approach for breast tissue classification using the features derived from electrical impedance spectroscopy. This method is composed of a feature extraction method, feature selection phase and a classification step. The feature extraction phase derives the features from the electrical impedance spectra. The extracted features consist of the impedivity at zero frequency (I0), the phase angle at 500 KHz, the high-frequency slope of phase angle, the impedance distance between spectral ends, the area under spectrum, the normalised area, the maximum of the spectrum, the distance between impedivity at I0 and the real part of the maximum frequency point and the length of the spectral curve. The system uses the information theoretic criterion as a strategy for feature selection and the combining extreme learning machines (ELMs) for the classification phase. The results of several ELMs are combined using the support vector machines classifier, and the result of classification is reported as a measure of the performance of the system. The results indicate that the proposed system achieves high accuracy in classification of breast tissues using the electrical impedance spectroscopy.

Generation of daily global solar irradiation with support vector machines for regression

International Nuclear Information System (INIS)

Antonanzas-Torres, F.; Urraca, R.; Antonanzas, J.; Fernandez-Ceniceros, J.; Martinez-de-Pison, F.J.

2015-01-01

Highlights: • New methodology for estimation of daily solar irradiation with SVR. • Automatic procedure for training models and selecting meteorological features. • This methodology outperforms other well-known parametric and numeric techniques. - Abstract: Solar global irradiation is barely recorded in isolated rural areas around the world. Traditionally, solar resource estimation has been performed using parametric-empirical models based on the relationship of solar irradiation with other atmospheric and commonly measured variables, such as temperatures, rainfall, and sunshine duration, achieving a relatively high level of certainty. Considerable improvement in soft-computing techniques, which have been applied extensively in many research fields, has lead to improvements in solar global irradiation modeling, although most of these techniques lack spatial generalization. This new methodology proposes support vector machines for regression with optimized variable selection via genetic algorithms to generate non-locally dependent and accurate models. A case of study in Spain has demonstrated the value of this methodology. It achieved a striking reduction in the mean absolute error (MAE) – 41.4% and 19.9% – as compared to classic parametric models; Bristow & Campbell and Antonanzas-Torres et al., respectively

Online Support Vector Regression with Varying Parameters for Time-Dependent Data

International Nuclear Information System (INIS)

Omitaomu, Olufemi A.; Jeong, Myong K.; Badiru, Adedeji B.

2011-01-01

Support vector regression (SVR) is a machine learning technique that continues to receive interest in several domains including manufacturing, engineering, and medicine. In order to extend its application to problems in which datasets arrive constantly and in which batch processing of the datasets is infeasible or expensive, an accurate online support vector regression (AOSVR) technique was proposed. The AOSVR technique efficiently updates a trained SVR function whenever a sample is added to or removed from the training set without retraining the entire training data. However, the AOSVR technique assumes that the new samples and the training samples are of the same characteristics; hence, the same value of SVR parameters is used for training and prediction. This assumption is not applicable to data samples that are inherently noisy and non-stationary such as sensor data. As a result, we propose Accurate On-line Support Vector Regression with Varying Parameters (AOSVR-VP) that uses varying SVR parameters rather than fixed SVR parameters, and hence accounts for the variability that may exist in the samples. To accomplish this objective, we also propose a generalized weight function to automatically update the weights of SVR parameters in on-line monitoring applications. The proposed function allows for lower and upper bounds for SVR parameters. We tested our proposed approach and compared results with the conventional AOSVR approach using two benchmark time series data and sensor data from nuclear power plant. The results show that using varying SVR parameters is more applicable to time dependent data.

An implementation of support vector machine on sentiment classification of movie reviews

Science.gov (United States)

Yulietha, I. M.; Faraby, S. A.; Adiwijaya; Widyaningtyas, W. C.

2018-03-01

With technological advances, all information about movie is available on the internet. If the information is processed properly, it will get the quality of the information. This research proposes to the classify sentiments on movie review documents. This research uses Support Vector Machine (SVM) method because it can classify high dimensional data in accordance with the data used in this research in the form of text. Support Vector Machine is a popular machine learning technique for text classification because it can classify by learning from a collection of documents that have been classified previously and can provide good result. Based on number of datasets, the 90-10 composition has the best result that is 85.6%. Based on SVM kernel, kernel linear with constant 1 has the best result that is 84.9%

Modeling and prediction of Turkey's electricity consumption using Support Vector Regression

International Nuclear Information System (INIS)

Kavaklioglu, Kadir

2011-01-01

Support Vector Regression (SVR) methodology is used to model and predict Turkey's electricity consumption. Among various SVR formalisms, ε-SVR method was used since the training pattern set was relatively small. Electricity consumption is modeled as a function of socio-economic indicators such as population, Gross National Product, imports and exports. In order to facilitate future predictions of electricity consumption, a separate SVR model was created for each of the input variables using their current and past values; and these models were combined to yield consumption prediction values. A grid search for the model parameters was performed to find the best ε-SVR model for each variable based on Root Mean Square Error. Electricity consumption of Turkey is predicted until 2026 using data from 1975 to 2006. The results show that electricity consumption can be modeled using Support Vector Regression and the models can be used to predict future electricity consumption. (author)

Extraction of inland Nypa fruticans (Nipa Palm) using Support Vector Machine

Science.gov (United States)

Alberto, R. T.; Serrano, S. C.; Damian, G. B.; Camaso, E. E.; Biagtan, A. R.; Panuyas, N. Z.; Quibuyen, J. S.

2017-09-01

Mangroves are considered as one of the major habitats in coastal ecosystem, providing a lot of economic and ecological services in human society. Nypa fruticans (Nipa palm) is one of the important species of mangroves because of its versatility and uniqueness as halophytic palm. However, nipas are not only adaptable in saline areas, they can also managed to thrive away from the coastline depending on the favorable soil types available in the area. Because of this, mapping of this species are not limited alone in the near shore areas, but in areas where this species are present as well. The extraction process of Nypa fruticans were carried out using the available LiDAR data. Support Vector Machine (SVM) classification process was used to extract nipas in inland areas. The SVM classification process in mapping Nypa fruticans produced high accuracy of 95+%. The Support Vector Machine classification process to extract inland nipas was proven to be effective by utilizing different terrain derivatives from LiDAR data.

Automatic Detection of P and S Phases by Support Vector Machine

Science.gov (United States)

Jiang, Y.; Ning, J.; Bao, T.

2017-12-01

Many methods in seismology rely on accurately picked phases. A well performed program on automatically phase picking will assure the application of these methods. Related researches before mostly focus on finding different characteristics between noise and phases, which are all not enough successful. We have developed a new method which mainly based on support vector machine to detect P and S phases. In it, we first input some waveform pieces into the support vector machine, then employ it to work out a hyper plane which can divide the space into two parts: respectively noise and phase. We further use the same method to find a hyper plane which can separate the phase space into P and S parts based on the three components' cross-correlation matrix. In order to further improve the ability of phase detection, we also employ array data. At last, we show that the overall effect of our method is robust by employing both synthetic and real data.

Prediction of protein binding sites using physical and chemical descriptors and the support vector machine regression method

International Nuclear Information System (INIS)

Sun Zhong-Hua; Jiang Fan

2010-01-01

In this paper a new continuous variable called core-ratio is defined to describe the probability for a residue to be in a binding site, thereby replacing the previous binary description of the interface residue using 0 and 1. So we can use the support vector machine regression method to fit the core-ratio value and predict the protein binding sites. We also design a new group of physical and chemical descriptors to characterize the binding sites. The new descriptors are more effective, with an averaging procedure used. Our test shows that much better prediction results can be obtained by the support vector regression (SVR) method than by the support vector classification method. (rapid communication)

Patients on weaning trials classified with support vector machines

International Nuclear Information System (INIS)

Garde, Ainara; Caminal, Pere; Giraldo, Beatriz F; Schroeder, Rico; Voss, Andreas; Benito, Salvador

2010-01-01

The process of discontinuing mechanical ventilation is called weaning and is one of the most challenging problems in intensive care. An unnecessary delay in the discontinuation process and an early weaning trial are undesirable. This study aims to characterize the respiratory pattern through features that permit the identification of patients' conditions in weaning trials. Three groups of patients have been considered: 94 patients with successful weaning trials, who could maintain spontaneous breathing after 48 h (GSucc); 39 patients who failed the weaning trial (GFail) and 21 patients who had successful weaning trials, but required reintubation in less than 48 h (GRein). Patients are characterized by their cardiorespiratory interactions, which are described by joint symbolic dynamics (JSD) applied to the cardiac interbeat and breath durations. The most discriminating features in the classification of the different groups of patients (GSucc, GFail and GRein) are identified by support vector machines (SVMs). The SVM-based feature selection algorithm has an accuracy of 81% in classifying GSucc versus the rest of the patients, 83% in classifying GRein versus GSucc patients and 81% in classifying GRein versus the rest of the patients. Moreover, a good balance between sensitivity and specificity is achieved in all classifications

Penerapan Support Vector Machine (SVM untuk Pengkategorian Penelitian

Directory of Open Access Journals (Sweden)

Fithri Selva Jumeilah

2017-07-01

Full Text Available Research every college will continue to grow. Research will be stored in softcopy and hardcopy. The preparation of the research should be categorized in order to facilitate the search for people who need reference. To categorize the research, we need a method for text mining, one of them is with the implementation of Support Vector Machines (SVM. The data used to recognize the characteristics of each category then it takes secondary data which is a collection of abstracts of research. The data will be pre-processed with several stages: case folding converts all the letters into lowercase, stop words removal removal of very common words, tokenizing discard punctuation, and stemming searching for root words by removing the prefix and suffix. Further data that has undergone preprocessing will be converted into a numerical form with for the term weighting stage that is the weighting contribution of each word. From the results of term weighting then obtained data that can be used for data training and test data. The training process is done by providing input in the form of text data that is known to the class or category. Then by using the Support Vector Machines algorithm, the input data is transformed into a rule, function, or knowledge model that can be used in the prediction process. From the results of this study obtained that the categorization of research produced by SVM has been very good. This is proven by the results of the test which resulted in an accuracy of 90%.

Impact of agriculture on the selection of insecticide resistance in the malaria vector Anopheles gambiae: a multigenerational study in controlled conditions.

Science.gov (United States)

Nkya, Theresia Estomih; Poupardin, Rodolphe; Laporte, Frederic; Akhouayri, Idir; Mosha, Franklin; Magesa, Stephen; Kisinza, William; David, Jean-Philippe

2014-10-16

Resistance of mosquitoes to insecticides is mainly attributed to their adaptation to vector control interventions. Although pesticides used in agriculture have been frequently mentioned as an additional force driving the selection of resistance, only a few studies were dedicated to validate this hypothesis and characterise the underlying mechanisms. While insecticide resistance is rising dramatically in Africa, deciphering how agriculture affects resistance is crucial for improving resistance management strategies. In this context, the multigenerational effect of agricultural pollutants on the selection of insecticide resistance was examined in Anopheles gambiae. An urban Tanzanian An. gambiae population displaying a low resistance level was used as a parental strain for a selection experiment across 20 generations. At each generation larvae were selected with a mixture containing pesticides and herbicides classically used in agriculture in Africa. The resistance levels of adults to deltamethrin, DDT and bendiocarb were compared between the selected and non-selected strains across the selection process together with the frequency of kdr mutations. A microarray approach was used for pinpointing transcription level variations selected by the agricultural pesticide mixture at the adult stage. A gradual increase of adult resistance to all insecticides was observed across the selection process. The frequency of the L1014S kdr mutation rose from 1.6% to 12.5% after 20 generations of selection. Microarray analysis identified 90 transcripts over-transcribed in the selected strain as compared to the parental and the non-selected strains. Genes encoding cuticle proteins, detoxification enzymes, proteins linked to neurotransmitter activity and transcription regulators were mainly affected. RT-qPCR transcription profiling of candidate genes across multiple generations supported their link with insecticide resistance. This study confirms the potency of agriculture in selecting

Exploiting Support Vector Machine Algorithm to Break the Secret Key

Directory of Open Access Journals (Sweden)

S. Hou

2018-04-01

Full Text Available Template attacks (TA and support vector machine (SVM are two effective methods in side channel attacks (SCAs. Almost all studies on SVM in SCAs assume the required power traces are sufficient, which also implies the number of profiling traces belonging to each class is equivalent. Indeed, in the real attack scenario, there may not be enough power traces due to various restrictions. More specifically, the Hamming Weight of the S-Box output results in 9 binomial distributed classes, which significantly reduces the performance of SVM compared with the uniformly distributed classes. In this paper, the impact of the distribution of profiling traces on the performance of SVM is first explored in detail. And also, we conduct Synthetic Minority Oversampling TEchnique (SMOTE to solve the problem caused by the binomial distributed classes. By using SMOTE, the success rate of SVM is improved in the testing phase, and SVM requires fewer power traces to recover the key. Besides, TA is selected as a comparison. In contrast to what is perceived as common knowledge in unrestricted scenarios, our results indicate that SVM with proper parameters can significantly outperform TA.

Discussion About Nonlinear Time Series Prediction Using Least Squares Support Vector Machine

International Nuclear Information System (INIS)

Xu Ruirui; Bian Guoxing; Gao Chenfeng; Chen Tianlun

2005-01-01

The least squares support vector machine (LS-SVM) is used to study the nonlinear time series prediction. First, the parameter γ and multi-step prediction capabilities of the LS-SVM network are discussed. Then we employ clustering method in the model to prune the number of the support values. The learning rate and the capabilities of filtering noise for LS-SVM are all greatly improved.

Efficient Prediction of Progesterone Receptor Interactome Using a Support Vector Machine Model

Directory of Open Access Journals (Sweden)

Ji-Long Liu

2015-03-01

Full Text Available Protein-protein interaction (PPI is essential for almost all cellular processes and identification of PPI is a crucial task for biomedical researchers. So far, most computational studies of PPI are intended for pair-wise prediction. Theoretically, predicting protein partners for a single protein is likely a simpler problem. Given enough data for a particular protein, the results can be more accurate than general PPI predictors. In the present study, we assessed the potential of using the support vector machine (SVM model with selected features centered on a particular protein for PPI prediction. As a proof-of-concept study, we applied this method to identify the interactome of progesterone receptor (PR, a protein which is essential for coordinating female reproduction in mammals by mediating the actions of ovarian progesterone. We achieved an accuracy of 91.9%, sensitivity of 92.8% and specificity of 91.2%. Our method is generally applicable to any other proteins and therefore may be of help in guiding biomedical experiments.

Support Vector Machines as tools for mortality graduation

Directory of Open Access Journals (Sweden)

Alberto Olivares

2011-01-01

Full Text Available A topic of interest in demographic and biostatistical analysis as well as in actuarial practice,is the graduation of the age-specific mortality pattern. A classical graduation technique is to fit parametric models. Recently, particular emphasis has been given to graduation using nonparametric techniques. Support Vector Machines (SVM is an innovative methodology that could be utilized for mortality graduation purposes. This paper evaluates SVM techniques as tools for graduating mortality rates. We apply SVM to empirical death rates from a variety of populations and time periods. For comparison, we also apply standard graduation techniques to the same data.

a Method for the Seamlines Network Automatic Selection Based on Building Vector

Science.gov (United States)

Li, P.; Dong, Y.; Hu, Y.; Li, X.; Tan, P.

2018-04-01

In order to improve the efficiency of large scale orthophoto production of city, this paper presents a method for automatic selection of seamlines network in large scale orthophoto based on the buildings' vector. Firstly, a simple model of the building is built by combining building's vector, height and DEM, and the imaging area of the building on single DOM is obtained. Then, the initial Voronoi network of the measurement area is automatically generated based on the positions of the bottom of all images. Finally, the final seamlines network is obtained by optimizing all nodes and seamlines in the network automatically based on the imaging areas of the buildings. The experimental results show that the proposed method can not only get around the building seamlines network quickly, but also remain the Voronoi network' characteristics of projection distortion minimum theory, which can solve the problem of automatic selection of orthophoto seamlines network in image mosaicking effectively.

PCR evaluation of selected vector-borne pathogens in dogs with pericardial effusion.

Science.gov (United States)

Tabar, M-D; Movilla, R; Serrano, L; Altet, L; Francino, O; Roura, X

2018-04-01

To investigate evidence for selected vector-borne pathogen infections in dogs with pericardial effusion living in a Mediterranean area in which several canine vector-borne diseases are endemic. Archived EDTA blood (n=68) and pericardial fluid samples (n=58) from dogs with pericardial effusion (n=68) were included. Dogs without pericardial effusion examined for other reasons were included as controls (n=60). Pericardial effusion was classified as neoplastic in 40 dogs, idiopathic in 23 dogs and of unknown aetiology in 5 dogs. Real-time PCR was performed for Leishmania infantum, Ehrlichia/Anaplasma species, Hepatozoon canis, Babesia species, Rickettsia species and Bartonella species, and sequencing of PCR products from positive samples was used to confirm species specificity. Vector-borne pathogens were found in 18 dogs: 16 of 68 dogs with pericardial effusion (23·5%) and two of 60 control dogs (3·3%). Positive dogs demonstrated DNA of Leishmania infantum (n=7), Anaplasma platys (n=2, one dog coinfected with Leishmania infantum), Babesia canis (n=5), Babesia gibsoni (n=3) and Hepatozoon canis (n=2). Vector-borne pathogens were more commonly detected among dogs with pericardial effusion than controls (P=0·001). There was no relationship between aetiology of the pericardial effusion and evidence of vector-borne pathogens (P=0·932). Vector-borne pathogens are often detected in dogs with pericardial effusion and require further investigation, especially in dogs with idiopathic pericardial effusion. PCR can provide additional information about the potential role of vector-borne pathogens in dogs with pericardial effusion living in endemic areas. © 2018 British Small Animal Veterinary Association.

Support vector regression methodology for estimating global solar radiation in Algeria

Science.gov (United States)

Guermoui, Mawloud; Rabehi, Abdelaziz; Gairaa, Kacem; Benkaciali, Said

2018-01-01

Accurate estimation of Daily Global Solar Radiation (DGSR) has been a major goal for solar energy applications. In this paper we show the possibility of developing a simple model based on the Support Vector Regression (SVM-R), which could be used to estimate DGSR on the horizontal surface in Algeria based only on sunshine ratio as input. The SVM model has been developed and tested using a data set recorded over three years (2005-2007). The data was collected at the Applied Research Unit for Renewable Energies (URAER) in Ghardaïa city. The data collected between 2005-2006 are used to train the model while the 2007 data are used to test the performance of the selected model. The measured and the estimated values of DGSR were compared during the testing phase statistically using the Root Mean Square Error (RMSE), Relative Square Error (rRMSE), and correlation coefficient (r2), which amount to 1.59(MJ/m2), 8.46 and 97,4%, respectively. The obtained results show that the SVM-R is highly qualified for DGSR estimation using only sunshine ratio.

Fuzzy support vector machine for microarray imbalanced data classification

Science.gov (United States)

Ladayya, Faroh; Purnami, Santi Wulan; Irhamah

2017-11-01

DNA microarrays are data containing gene expression with small sample sizes and high number of features. Furthermore, imbalanced classes is a common problem in microarray data. This occurs when a dataset is dominated by a class which have significantly more instances than the other minority classes. Therefore, it is needed a classification method that solve the problem of high dimensional and imbalanced data. Support Vector Machine (SVM) is one of the classification methods that is capable of handling large or small samples, nonlinear, high dimensional, over learning and local minimum issues. SVM has been widely applied to DNA microarray data classification and it has been shown that SVM provides the best performance among other machine learning methods. However, imbalanced data will be a problem because SVM treats all samples in the same importance thus the results is bias for minority class. To overcome the imbalanced data, Fuzzy SVM (FSVM) is proposed. This method apply a fuzzy membership to each input point and reformulate the SVM such that different input points provide different contributions to the classifier. The minority classes have large fuzzy membership so FSVM can pay more attention to the samples with larger fuzzy membership. Given DNA microarray data is a high dimensional data with a very large number of features, it is necessary to do feature selection first using Fast Correlation based Filter (FCBF). In this study will be analyzed by SVM, FSVM and both methods by applying FCBF and get the classification performance of them. Based on the overall results, FSVM on selected features has the best classification performance compared to SVM.

A comparison study of support vector machines and hidden Markov models in machinery condition monitoring

International Nuclear Information System (INIS)

Miao, Qiang; Huang, Hong Zhong; Fan, Xianfeng

2007-01-01

Condition classification is an important step in machinery fault detection, which is a problem of pattern recognition. Currently, there are a lot of techniques in this area and the purpose of this paper is to investigate two popular recognition techniques, namely hidden Markov model and support vector machine. At the beginning, we briefly introduced the procedure of feature extraction and the theoretical background of this paper. The comparison experiment was conducted for gearbox fault detection and the analysis results from this work showed that support vector machine has better classification performance in this area

A Support Vector Machine Approach to Dutch Part-of-Speech Tagging

NARCIS (Netherlands)

Poel, Mannes; Stegeman, L.; op den Akker, Hendrikus J.A.; Berthold, M.R.; Shawe-Taylor, J.; Lavrac, N.

Part-of-Speech tagging, the assignment of Parts-of-Speech to the words in a given context of use, is a basic technique in many systems that handle natural languages. This paper describes a method for supervised training of a Part-of-Speech tagger using a committee of Support Vector Machines on a

Application of Hybrid Quantum Tabu Search with Support Vector Regression (SVR for Load Forecasting

Directory of Open Access Journals (Sweden)

Cheng-Wen Lee

2016-10-01

Full Text Available Hybridizing chaotic evolutionary algorithms with support vector regression (SVR to improve forecasting accuracy is a hot topic in electricity load forecasting. Trapping at local optima and premature convergence are critical shortcomings of the tabu search (TS algorithm. This paper investigates potential improvements of the TS algorithm by applying quantum computing mechanics to enhance the search information sharing mechanism (tabu memory to improve the forecasting accuracy. This article presents an SVR-based load forecasting model that integrates quantum behaviors and the TS algorithm with the support vector regression model (namely SVRQTS to obtain a more satisfactory forecasting accuracy. Numerical examples demonstrate that the proposed model outperforms the alternatives.

A Novel Classification Algorithm Based on Incremental Semi-Supervised Support Vector Machine.

Directory of Open Access Journals (Sweden)

Fei Gao

Full Text Available For current computational intelligence techniques, a major challenge is how to learn new concepts in changing environment. Traditional learning schemes could not adequately address this problem due to a lack of dynamic data selection mechanism. In this paper, inspired by human learning process, a novel classification algorithm based on incremental semi-supervised support vector machine (SVM is proposed. Through the analysis of prediction confidence of samples and data distribution in a changing environment, a "soft-start" approach, a data selection mechanism and a data cleaning mechanism are designed, which complete the construction of our incremental semi-supervised learning system. Noticeably, with the ingenious design procedure of our proposed algorithm, the computation complexity is reduced effectively. In addition, for the possible appearance of some new labeled samples in the learning process, a detailed analysis is also carried out. The results show that our algorithm does not rely on the model of sample distribution, has an extremely low rate of introducing wrong semi-labeled samples and can effectively make use of the unlabeled samples to enrich the knowledge system of classifier and improve the accuracy rate. Moreover, our method also has outstanding generalization performance and the ability to overcome the concept drift in a changing environment.

Credit Scoring by Fuzzy Support Vector Machines with a Novel Membership Function

Directory of Open Access Journals (Sweden)

Jian Shi

2016-11-01

Full Text Available Due to the recent financial crisis and European debt crisis, credit risk evaluation has become an increasingly important issue for financial institutions. Reliable credit scoring models are crucial for commercial banks to evaluate the financial performance of clients and have been widely studied in the fields of statistics and machine learning. In this paper a novel fuzzy support vector machine (SVM credit scoring model is proposed for credit risk analysis, in which fuzzy membership is adopted to indicate different contribution of each input point to the learning of SVM classification hyperplane. Considering the methodological consistency, support vector data description (SVDD is introduced to construct the fuzzy membership function and to reduce the effect of outliers and noises. The SVDD-based fuzzy SVM model is tested against the traditional fuzzy SVM on two real-world datasets and the research results confirm the effectiveness of the presented method.

Adaptive image denoising based on support vector machine and wavelet description

Science.gov (United States)

An, Feng-Ping; Zhou, Xian-Wei

2017-12-01

Adaptive image denoising method decomposes the original image into a series of basic pattern feature images on the basis of wavelet description and constructs the support vector machine regression function to realize the wavelet description of the original image. The support vector machine method allows the linear expansion of the signal to be expressed as a nonlinear function of the parameters associated with the SVM. Using the radial basis kernel function of SVM, the original image can be extended into a MEXICAN function and a residual trend. This MEXICAN represents a basic image feature pattern. If the residual does not fluctuate, it can also be represented as a characteristic pattern. If the residuals fluctuate significantly, it is treated as a new image and the same decomposition process is repeated until the residuals obtained by the decomposition do not significantly fluctuate. Experimental results show that the proposed method in this paper performs well; especially, it satisfactorily solves the problem of image noise removal. It may provide a new tool and method for image denoising.

Support vector regression model based predictive control of water level of U-tube steam generators

Energy Technology Data Exchange (ETDEWEB)

Kavaklioglu, Kadir, E-mail: kadir.kavaklioglu@pau.edu.tr

2014-10-15

Highlights: • Water level of U-tube steam generators was controlled in a model predictive fashion. • Models for steam generator water level were built using support vector regression. • Cost function minimization for future optimal controls was performed by using the steepest descent method. • The results indicated the feasibility of the proposed method. - Abstract: A predictive control algorithm using support vector regression based models was proposed for controlling the water level of U-tube steam generators of pressurized water reactors. Steam generator data were obtained using a transfer function model of U-tube steam generators. Support vector regression based models were built using a time series type model structure for five different operating powers. Feedwater flow controls were calculated by minimizing a cost function that includes the level error, the feedwater change and the mismatch between feedwater and steam flow rates. Proposed algorithm was applied for a scenario consisting of a level setpoint change and a steam flow disturbance. The results showed that steam generator level can be controlled at all powers effectively by the proposed method.

Insect cell transformation vectors that support high level expression and promoter assessment in insect cell culture

Science.gov (United States)

A somatic transformation vector, pDP9, was constructed that provides a simplified means of producing permanently transformed cultured insect cells that support high levels of protein expression of foreign genes. The pDP9 plasmid vector incorporates DNA sequences from the Junonia coenia densovirus th...

Improving breast cancer classification with mammography, supported on an appropriate variable selection analysis

Science.gov (United States)

Pérez, Noel; Guevara, Miguel A.; Silva, Augusto

2013-02-01

This work addresses the issue of variable selection within the context of breast cancer classification with mammography. A comprehensive repository of feature vectors was used including a hybrid subset gathering image-based and clinical features. It aimed to gather experimental evidence of variable selection in terms of cardinality, type and find a classification scheme that provides the best performance over the Area Under Receiver Operating Characteristics Curve (AUC) scores using the ranked features subset. We evaluated and classified a total of 300 subsets of features formed by the application of Chi-Square Discretization, Information-Gain, One-Rule and RELIEF methods in association with Feed-Forward Backpropagation Neural Network (FFBP), Support Vector Machine (SVM) and Decision Tree J48 (DTJ48) Machine Learning Algorithms (MLA) for a comparative performance evaluation based on AUC scores. A variable selection analysis was performed for Single-View Ranking and Multi-View Ranking groups of features. Features subsets representing Microcalcifications (MCs), Masses and both MCs and Masses lesions achieved AUC scores of 0.91, 0.954 and 0.934 respectively. Experimental evidence demonstrated that classification performance was improved by combining image-based and clinical features. The most important clinical and image-based features were StromaDistortion and Circularity respectively. Other less important but worth to use due to its consistency were Contrast, Perimeter, Microcalcification, Correlation and Elongation.

Reliable Fault Classification of Induction Motors Using Texture Feature Extraction and a Multiclass Support Vector Machine

Directory of Open Access Journals (Sweden)

Jia Uddin

2014-01-01

Full Text Available This paper proposes a method for the reliable fault detection and classification of induction motors using two-dimensional (2D texture features and a multiclass support vector machine (MCSVM. The proposed model first converts time-domain vibration signals to 2D gray images, resulting in texture patterns (or repetitive patterns, and extracts these texture features by generating the dominant neighborhood structure (DNS map. The principal component analysis (PCA is then used for the purpose of dimensionality reduction of the high-dimensional feature vector including the extracted texture features due to the fact that the high-dimensional feature vector can degrade classification performance, and this paper configures an effective feature vector including discriminative fault features for diagnosis. Finally, the proposed approach utilizes the one-against-all (OAA multiclass support vector machines (MCSVMs to identify induction motor failures. In this study, the Gaussian radial basis function kernel cooperates with OAA MCSVMs to deal with nonlinear fault features. Experimental results demonstrate that the proposed approach outperforms three state-of-the-art fault diagnosis algorithms in terms of fault classification accuracy, yielding an average classification accuracy of 100% even in noisy environments.

Classification of masses on mammograms using support vector machine

Science.gov (United States)

Chu, Yong; Li, Lihua; Goldgof, Dmitry B.; Qui, Yan; Clark, Robert A.

2003-05-01

Mammography is the most effective method for early detection of breast cancer. However, the positive predictive value for classification of malignant and benign lesion from mammographic images is not very high. Clinical studies have shown that most biopsies for cancer are very low, between 15% and 30%. It is important to increase the diagnostic accuracy by improving the positive predictive value to reduce the number of unnecessary biopsies. In this paper, a new classification method was proposed to distinguish malignant from benign masses in mammography by Support Vector Machine (SVM) method. Thirteen features were selected based on receiver operating characteristic (ROC) analysis of classification using individual feature. These features include four shape features, two gradient features and seven Laws features. With these features, SVM was used to classify the masses into two categories, benign and malignant, in which a Gaussian kernel and sequential minimal optimization learning technique are performed. The data set used in this study consists of 193 cases, in which there are 96 benign cases and 97 malignant cases. The leave-one-out evaluation of SVM classifier was taken. The results show that the positive predict value of the presented method is 81.6% with the sensitivity of 83.7% and the false-positive rate of 30.2%. It demonstrated that the SVM-based classifier is effective in mass classification.

Incremental Support Vector Machine Framework for Visual Sensor Networks

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Yuichi Motai

2007-01-01

Full Text Available Motivated by the emerging requirements of surveillance networks, we present in this paper an incremental multiclassification support vector machine (SVM technique as a new framework for action classification based on real-time multivideo collected by homogeneous sites. The technique is based on an adaptation of least square SVM (LS-SVM formulation but extends beyond the static image-based learning of current SVM methodologies. In applying the technique, an initial supervised offline learning phase is followed by a visual behavior data acquisition and an online learning phase during which the cluster head performs an ensemble of model aggregations based on the sensor nodes inputs. The cluster head then selectively switches on designated sensor nodes for future incremental learning. Combining sensor data offers an improvement over single camera sensing especially when the latter has an occluded view of the target object. The optimization involved alleviates the burdens of power consumption and communication bandwidth requirements. The resulting misclassification error rate, the iterative error reduction rate of the proposed incremental learning, and the decision fusion technique prove its validity when applied to visual sensor networks. Furthermore, the enabled online learning allows an adaptive domain knowledge insertion and offers the advantage of reducing both the model training time and the information storage requirements of the overall system which makes it even more attractive for distributed sensor networks communication.

Sentiment Analysis in the Sales Review of Indonesian Marketplace by Utilizing Support Vector Machine

Directory of Open Access Journals (Sweden)

Anang Anggono Lutfi

2018-04-01

Full Text Available The online store is changing people’s shopping behavior. Despite the fact, the potential customer’s distrust in the quality of products and service is one of the online store’s weaknesses. A review is provided by the online stores to overcome this weakness. Customers often write a review using languages that are not well structured. Sentiment analysis is used to extract the polarity of the unstructured texts. This research attempted to do a sentiment analysis in the sales review. Sentiment analysis in sales reviews can be used as a tool to evaluate the sales. This research intends to conduct a sentiment analysis in the sales review of Indonesian marketplace by utilizing Support Vector Machine and Naive Bayes. The reviews of the data are gathered from one of Indonesian marketplace, Bukalapak. The data are classified into positive or negative class. TF-IDF is used to feature extraction. The experiment shows that Support Vector Machine with linear kernel provides higher accuracy than Naive Bayes. Support Vector Machine shows the highest accuracy average. The generated accuracy is 93.65%. This approach of sentiment analysis in sales review can be used as the base of intelligent sales evaluation for online stores in the future.

Neutron–gamma discrimination based on the support vector machine method

International Nuclear Information System (INIS)

Yu, Xunzhen; Zhu, Jingjun; Lin, ShinTed; Wang, Li; Xing, Haoyang; Zhang, Caixun; Xia, Yuxi; Liu, Shukui; Yue, Qian; Wei, Weiwei; Du, Qiang; Tang, Changjian

2015-01-01

In this study, the combination of the support vector machine (SVM) method with the moment analysis method (MAM) is proposed and utilized to perform neutron/gamma (n/γ) discrimination of the pulses from an organic liquid scintillator (OLS). Neutron and gamma events, which can be firmly separated on the scatter plot drawn by the charge comparison method (CCM), are detected to form the training data set and the test data set for the SVM, and the MAM is used to create the feature vectors for individual events in the data sets. Compared to the traditional methods, such as CCM, the proposed method can not only discriminate the neutron and gamma signals, even at lower energy levels, but also provide the corresponding classification accuracy for each event, which is useful in validating the discrimination. Meanwhile, the proposed method can also offer a predication of the classification for the under-energy-limit events

Support Vector Machine Based Tool for Plant Species Taxonomic Classification

OpenAIRE

Manimekalai .K; Vijaya.MS

2014-01-01

Plant species are living things and are generally categorized in terms of Domain, Kingdom, Phylum, Class, Order, Family, Genus and name of Species in a hierarchical fashion. This paper formulates the taxonomic leaf categorization problem as the hierarchical classification task and provides a suitable solution using a supervised learning technique namely support vector machine. Features are extracted from scanned images of plant leaves and trained using SVM. Only class, order, family of plants...

Pipeline leakage recognition based on the projection singular value features and support vector machine

Energy Technology Data Exchange (ETDEWEB)

Liang, Wei; Zhang, Laibin; Mingda, Wang; Jinqiu, Hu [College of Mechanical and Transportation Engineering, China University of Petroleum, Beijing, (China)

2010-07-01

The negative wave pressure method is one of the processes used to detect leaks on oil pipelines. The development of new leakage recognition processes is difficult because it is practically impossible to collect leakage pressure samples. The method of leakage feature extraction and the selection of the recognition model are also important in pipeline leakage detection. This study investigated a new feature extraction approach Singular Value Projection (SVP). It projects the singular value to a standard basis. A new pipeline recognition model based on the multi-class Support Vector Machines was also developed. It was found that SVP is a clear and concise recognition feature of the negative pressure wave. Field experiments proved that the model provided a high recognition accuracy rate. This approach to pipeline leakage detection based on the SVP and SVM has a high application value.

Profiled support vector machines for antisense oligonucleotide efficacy prediction

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Martín-Guerrero José D

2004-09-01

Full Text Available Abstract Background This paper presents the use of Support Vector Machines (SVMs for prediction and analysis of antisense oligonucleotide (AO efficacy. The collected database comprises 315 AO molecules including 68 features each, inducing a problem well-suited to SVMs. The task of feature selection is crucial given the presence of noisy or redundant features, and the well-known problem of the curse of dimensionality. We propose a two-stage strategy to develop an optimal model: (1 feature selection using correlation analysis, mutual information, and SVM-based recursive feature elimination (SVM-RFE, and (2 AO prediction using standard and profiled SVM formulations. A profiled SVM gives different weights to different parts of the training data to focus the training on the most important regions. Results In the first stage, the SVM-RFE technique was most efficient and robust in the presence of low number of samples and high input space dimension. This method yielded an optimal subset of 14 representative features, which were all related to energy and sequence motifs. The second stage evaluated the performance of the predictors (overall correlation coefficient between observed and predicted efficacy, r; mean error, ME; and root-mean-square-error, RMSE using 8-fold and minus-one-RNA cross-validation methods. The profiled SVM produced the best results (r = 0.44, ME = 0.022, and RMSE= 0.278 and predicted high (>75% inhibition of gene expression and low efficacy (http://aosvm.cgb.ki.se/. Conclusions The SVM approach is well suited to the AO prediction problem, and yields a prediction accuracy superior to previous methods. The profiled SVM was found to perform better than the standard SVM, suggesting that it could lead to improvements in other prediction problems as well.

Support Vector Machine Diagnosis of Acute Abdominal Pain

Science.gov (United States)

Björnsdotter, Malin; Nalin, Kajsa; Hansson, Lars-Erik; Malmgren, Helge

This study explores the feasibility of a decision-support system for patients seeking care for acute abdominal pain, and, specifically the diagnosis of acute diverticulitis. We used a linear support vector machine (SVM) to separate diverticulitis from all other reported cases of abdominal pain and from the important differential diagnosis non-specific abdominal pain (NSAP). On a database containing 3337 patients, the SVM obtained results comparable to those of the doctors in separating diverticulitis or NSAP from the remaining diseases. The distinction between diverticulitis and NSAP was, however, substantially improved by the SVM. For this patient group, the doctors achieved a sensitivity of 0.714 and a specificity of 0.963. When adjusted to the physicians' results, the SVM sensitivity/specificity was higher at 0.714/0.985 and 0.786/0.963 respectively. Age was found as the most important discriminative variable, closely followed by C-reactive protein level and lower left side pain.

Prediction of hourly PM2.5 using a space-time support vector regression model

Science.gov (United States)

Yang, Wentao; Deng, Min; Xu, Feng; Wang, Hang

2018-05-01

Real-time air quality prediction has been an active field of research in atmospheric environmental science. The existing methods of machine learning are widely used to predict pollutant concentrations because of their enhanced ability to handle complex non-linear relationships. However, because pollutant concentration data, as typical geospatial data, also exhibit spatial heterogeneity and spatial dependence, they may violate the assumptions of independent and identically distributed random variables in most of the machine learning methods. As a result, a space-time support vector regression model is proposed to predict hourly PM2.5 concentrations. First, to address spatial heterogeneity, spatial clustering is executed to divide the study area into several homogeneous or quasi-homogeneous subareas. To handle spatial dependence, a Gauss vector weight function is then developed to determine spatial autocorrelation variables as part of the input features. Finally, a local support vector regression model with spatial autocorrelation variables is established for each subarea. Experimental data on PM2.5 concentrations in Beijing are used to verify whether the results of the proposed model are superior to those of other methods.

Plasmid Vectors for Xylella fastidiosa Utilizing a Toxin-Antitoxin System for Stability in the Absence of Antibiotic Selection.

Science.gov (United States)

Burbank, Lindsey P; Stenger, Drake C

2016-08-01

The phytopathogen Xylella fastidiosa causes disease in a variety of important crop and landscape plants. Functional genetic studies have led to a broader understanding of virulence mechanisms used by this pathogen in the grapevine host. Plasmid shuttle vectors are important tools in studies of bacterial genetics but there are only a limited number of plasmid vectors available that replicate in X. fastidiosa, and even fewer that are retained without antibiotic selection. Two plasmids are described here that show stable replication in X. fastidiosa and are effective for gene complementation both in vitro and in planta. Plasmid maintenance is facilitated by incorporation of the PemI/PemK plasmid addiction system, consisting of PemK, an endoribonuclease toxin, and its cognate antitoxin, PemI. Vector pXf20pemIK utilizes a native X. fastidiosa replication origin as well as a high-copy-number pUC origin for propagation in Escherichia coli cloning strains. Broad-host-range vector pBBR5pemIK is a medium- to low-copy-number plasmid based on the pBBR1 backbone. Both plasmids are maintained for extended periods of time in the absence of antibiotic selection, as well as up to 14 weeks in grapevine, without affecting bacterial fitness. These plasmids present an alternative to traditional complementation and expression vectors which rely on antibiotic selection for plasmid retention.

Partial discharge signal denoising with spatially adaptive wavelet thresholding and support vector machines

Energy Technology Data Exchange (ETDEWEB)

Mota, Hilton de Oliveira; Rocha, Leonardo Chaves Dutra da [Department of Computer Science, Federal University of Sao Joao del-Rei, Visconde do Rio Branco Ave., Colonia do Bengo, Sao Joao del-Rei, MG, 36301-360 (Brazil); Salles, Thiago Cunha de Moura [Department of Computer Science, Federal University of Minas Gerais, 6627 Antonio Carlos Ave., Pampulha, Belo Horizonte, MG, 31270-901 (Brazil); Vasconcelos, Flavio Henrique [Department of Electrical Engineering, Federal University of Minas Gerais, 6627 Antonio Carlos Ave., Pampulha, Belo Horizonte, MG, 31270-901 (Brazil)

2011-02-15

In this paper an improved method to denoise partial discharge (PD) signals is presented. The method is based on the wavelet transform (WT) and support vector machines (SVM) and is distinct from other WT-based denoising strategies in the sense that it exploits the high spatial correlations presented by PD wavelet decompositions as a way to identify and select the relevant coefficients. PD spatial correlations are characterized by WT modulus maxima propagation along decomposition levels (scales), which are a strong indicative of the their time-of-occurrence. Denoising is performed by identification and separation of PD-related maxima lines by an SVM pattern classifier. The results obtained confirm that this method has superior denoising capabilities when compared to other WT-based methods found in the literature for the processing of Gaussian and discrete spectral interferences. Moreover, its greatest advantages become clear when the interference has a pulsating or localized shape, situation in which traditional methods usually fail. (author)

Genomic Footprints of Selective Sweeps from Metabolic Resistance to Pyrethroids in African Malaria Vectors Are Driven by Scale up of Insecticide-Based Vector Control.

Science.gov (United States)

Barnes, Kayla G; Weedall, Gareth D; Ndula, Miranda; Irving, Helen; Mzihalowa, Themba; Hemingway, Janet; Wondji, Charles S

2017-02-01

Insecticide resistance in mosquito populations threatens recent successes in malaria prevention. Elucidating patterns of genetic structure in malaria vectors to predict the speed and direction of the spread of resistance is essential to get ahead of the 'resistance curve' and to avert a public health catastrophe. Here, applying a combination of microsatellite analysis, whole genome sequencing and targeted sequencing of a resistance locus, we elucidated the continent-wide population structure of a major African malaria vector, Anopheles funestus. We identified a major selective sweep in a genomic region controlling cytochrome P450-based metabolic resistance conferring high resistance to pyrethroids. This selective sweep occurred since 2002, likely as a direct consequence of scaled up vector control as revealed by whole genome and fine-scale sequencing of pre- and post-intervention populations. Fine-scaled analysis of the pyrethroid resistance locus revealed that a resistance-associated allele of the cytochrome P450 monooxygenase CYP6P9a has swept through southern Africa to near fixation, in contrast to high polymorphism levels before interventions, conferring high levels of pyrethroid resistance linked to control failure. Population structure analysis revealed a barrier to gene flow between southern Africa and other areas, which may prevent or slow the spread of the southern mechanism of pyrethroid resistance to other regions. By identifying a genetic signature of pyrethroid-based interventions, we have demonstrated the intense selective pressure that control interventions exert on mosquito populations. If this level of selection and spread of resistance continues unabated, our ability to control malaria with current interventions will be compromised.

Genomic Footprints of Selective Sweeps from Metabolic Resistance to Pyrethroids in African Malaria Vectors Are Driven by Scale up of Insecticide-Based Vector Control.

Directory of Open Access Journals (Sweden)

Kayla G Barnes

2017-02-01

Full Text Available Insecticide resistance in mosquito populations threatens recent successes in malaria prevention. Elucidating patterns of genetic structure in malaria vectors to predict the speed and direction of the spread of resistance is essential to get ahead of the 'resistance curve' and to avert a public health catastrophe. Here, applying a combination of microsatellite analysis, whole genome sequencing and targeted sequencing of a resistance locus, we elucidated the continent-wide population structure of a major African malaria vector, Anopheles funestus. We identified a major selective sweep in a genomic region controlling cytochrome P450-based metabolic resistance conferring high resistance to pyrethroids. This selective sweep occurred since 2002, likely as a direct consequence of scaled up vector control as revealed by whole genome and fine-scale sequencing of pre- and post-intervention populations. Fine-scaled analysis of the pyrethroid resistance locus revealed that a resistance-associated allele of the cytochrome P450 monooxygenase CYP6P9a has swept through southern Africa to near fixation, in contrast to high polymorphism levels before interventions, conferring high levels of pyrethroid resistance linked to control failure. Population structure analysis revealed a barrier to gene flow between southern Africa and other areas, which may prevent or slow the spread of the southern mechanism of pyrethroid resistance to other regions. By identifying a genetic signature of pyrethroid-based interventions, we have demonstrated the intense selective pressure that control interventions exert on mosquito populations. If this level of selection and spread of resistance continues unabated, our ability to control malaria with current interventions will be compromised.

Automatic Modulation Recognition by Support Vector Machines Using Wavelet Kernel

Energy Technology Data Exchange (ETDEWEB)

Feng, X Z; Yang, J; Luo, F L; Chen, J Y; Zhong, X P [College of Mechatronic Engineering and Automation, National University of Defense Technology, Changsha (China)

2006-10-15

Automatic modulation identification plays a significant role in electronic warfare, electronic surveillance systems and electronic counter measure. The task of modulation recognition of communication signals is to determine the modulation type and signal parameters. In fact, automatic modulation identification can be range to an application of pattern recognition in communication field. The support vector machines (SVM) is a new universal learning machine which is widely used in the fields of pattern recognition, regression estimation and probability density. In this paper, a new method using wavelet kernel function was proposed, which maps the input vector xi into a high dimensional feature space F. In this feature space F, we can construct the optimal hyperplane that realizes the maximal margin in this space. That is to say, we can use SVM to classify the communication signals into two groups, namely analogue modulated signals and digitally modulated signals. In addition, computer simulation results are given at last, which show good performance of the method.

Automatic Modulation Recognition by Support Vector Machines Using Wavelet Kernel

International Nuclear Information System (INIS)

Feng, X Z; Yang, J; Luo, F L; Chen, J Y; Zhong, X P

2006-01-01

Automatic modulation identification plays a significant role in electronic warfare, electronic surveillance systems and electronic counter measure. The task of modulation recognition of communication signals is to determine the modulation type and signal parameters. In fact, automatic modulation identification can be range to an application of pattern recognition in communication field. The support vector machines (SVM) is a new universal learning machine which is widely used in the fields of pattern recognition, regression estimation and probability density. In this paper, a new method using wavelet kernel function was proposed, which maps the input vector xi into a high dimensional feature space F. In this feature space F, we can construct the optimal hyperplane that realizes the maximal margin in this space. That is to say, we can use SVM to classify the communication signals into two groups, namely analogue modulated signals and digitally modulated signals. In addition, computer simulation results are given at last, which show good performance of the method

Efficient Multiplicative Updates for Support Vector Machines

DEFF Research Database (Denmark)

Potluru, Vamsi K.; Plis, Sergie N; Mørup, Morten

2009-01-01

(NMF) problem. This allows us to derive a novel multiplicative algorithm for solving hard and soft margin SVM. The algorithm follows as a natural extension of the updates for NMF and semi-NMF. No additional parameter setting, such as choosing learning rate, is required. Exploiting the connection......The dual formulation of the support vector machine (SVM) objective function is an instance of a nonnegative quadratic programming problem. We reformulate the SVM objective function as a matrix factorization problem which establishes a connection with the regularized nonnegative matrix factorization...... between SVM and NMF formulation, we show how NMF algorithms can be applied to the SVM problem. Multiplicative updates that we derive for SVM problem also represent novel updates for semi-NMF. Further this unified view yields algorithmic insights in both directions: we demonstrate that the Kernel Adatron...

Klasifikasi Topik Keluhan Pelanggan Berdasarkan Tweet dengan Menggunakan Penggabungan Feature Hasil Ekstraksi pada Metode Support Vector Machine (SVM

Directory of Open Access Journals (Sweden)

Enda Esyudha Pratama

2015-12-01

Full Text Available Pemanfaatan twitter sebagai layanan customer serevice perusahaan sudah mulai banyak digunakan, tak terkecuali Speedy. Mekanisme yang ada saat ini untuk proses klasifikasi bentuk dan jenis keluhan serta informasi tentang jumlah keluhan lewat twitter masih dilakukan secara manual. Belum lagi data twitter yang bersifat tidak terstruktur tentunya akan menyulitkan untuk dilakukan analisa dan penggalian informasi dari data tersebut. Berdasarkan permasalahan tersebut, penelitian ini bertujuan untuk memproses data teks dari tweet pengguna twitteryang masuk ke akun @TelkomSpeedy untuk diolah menjadi informasi. Informasi tersebut nantinya digunakan untuk klasifikasi bentuk dan jenis keluhan. Merujuk pada beberapa penelitian terkait, salah satu metode klasifikasi yang paling baik untuk digunakan adalah metode Support Vector Machine (SVM. Konsep dari SVM dapat dijelaskan secara sederhana sebagai usaha mencari hyperplane yang dapat memisahkan dataset sesuai dengan kelasnya. Kelas yang digunakan dalam penelitian kali ini berdasarkan topik keluhan pelanggan yaitu billing, pemasangan/instalasi, putus (disconnect, dan lambat. Faktor penting lainnya dalam hal klasifikasi adalah penentuan feature atau atribut kata yang akan digunakan. Metode feature selection yang digunakan pada penlitian ini adalah term frequency (TF, document frequency (DF, information gain, dan chi-square. Pada penelitian ini juga dilakukan metode penggabungan feature yang telah dihasilkan dari beberapa metode feature selection sebelumnya. Dari hasil penelitian menunjukan bahwa SVM mampu melakukan klasifikasi keluhan dengan baik, hal ini dibuktikan dengan akurasi 82,50% untuk klasifikasi bentuk keluhan dan 86,67% untuk klasifikasi jenis keluhan. Sedangkan untuk kombinasi penggunaan feature dapat meningkatkan akurasi menjadi 83,33% untuk bentuk keluhan dan 89,17% untuk jenis keluhan.   Kata Kunci—customer service, klasifikasi topik keluhan, penggabungan feature, support vector machine

Cancer Classification Based on Support Vector Machine Optimized by Particle Swarm Optimization and Artificial Bee Colony.

Science.gov (United States)

Gao, Lingyun; Ye, Mingquan; Wu, Changrong

2017-11-29

Intelligent optimization algorithms have advantages in dealing with complex nonlinear problems accompanied by good flexibility and adaptability. In this paper, the FCBF (Fast Correlation-Based Feature selection) method is used to filter irrelevant and redundant features in order to improve the quality of cancer classification. Then, we perform classification based on SVM (Support Vector Machine) optimized by PSO (Particle Swarm Optimization) combined with ABC (Artificial Bee Colony) approaches, which is represented as PA-SVM. The proposed PA-SVM method is applied to nine cancer datasets, including five datasets of outcome prediction and a protein dataset of ovarian cancer. By comparison with other classification methods, the results demonstrate the effectiveness and the robustness of the proposed PA-SVM method in handling various types of data for cancer classification.

Laser-induced Breakdown spectroscopy quantitative analysis method via adaptive analytical line selection and relevance vector machine regression model

International Nuclear Information System (INIS)

Yang, Jianhong; Yi, Cancan; Xu, Jinwu; Ma, Xianghong

2015-01-01

A new LIBS quantitative analysis method based on analytical line adaptive selection and Relevance Vector Machine (RVM) regression model is proposed. First, a scheme of adaptively selecting analytical line is put forward in order to overcome the drawback of high dependency on a priori knowledge. The candidate analytical lines are automatically selected based on the built-in characteristics of spectral lines, such as spectral intensity, wavelength and width at half height. The analytical lines which will be used as input variables of regression model are determined adaptively according to the samples for both training and testing. Second, an LIBS quantitative analysis method based on RVM is presented. The intensities of analytical lines and the elemental concentrations of certified standard samples are used to train the RVM regression model. The predicted elemental concentration analysis results will be given with a form of confidence interval of probabilistic distribution, which is helpful for evaluating the uncertainness contained in the measured spectra. Chromium concentration analysis experiments of 23 certified standard high-alloy steel samples have been carried out. The multiple correlation coefficient of the prediction was up to 98.85%, and the average relative error of the prediction was 4.01%. The experiment results showed that the proposed LIBS quantitative analysis method achieved better prediction accuracy and better modeling robustness compared with the methods based on partial least squares regression, artificial neural network and standard support vector machine. - Highlights: • Both training and testing samples are considered for analytical lines selection. • The analytical lines are auto-selected based on the built-in characteristics of spectral lines. • The new method can achieve better prediction accuracy and modeling robustness. • Model predictions are given with confidence interval of probabilistic distribution

Near State Vector Selection-Based Model Predictive Control with Common Mode Voltage Mitigation for a Three-Phase Four-Leg Inverter

Directory of Open Access Journals (Sweden)

Abdul Mannan Dadu

2017-12-01

Full Text Available A high computational burden is required in conventional model predictive control, as all of the voltage vectors of a power inverter are used to predict the future behavior of the system. Apart from that, the common mode voltage (CMV of a three-phase four-leg inverter utilizes up to half of the DC-link voltage due to the use of all of the available voltage vectors. Thus, this paper proposes a near state vector selection-based model predictive control (NSV-MPC scheme to mitigate the CMV and reduce computational burden. In the proposed technique, only six active voltage vectors are used in the predictive model, and the vectors are selected based on the position of the future reference vector. In every sampling period, the position of the reference current is used to detect the voltage vectors surrounding the reference voltage vector. Besides the six active vectors, one of the zero vectors is also used. The proposed technique is compared with the conventional control scheme in terms of execution time, CMV variation, and load current ripple in both simulation and an experimental setup. The LabVIEW Field programmable gate array rapid prototyping controller is used to validate the proposed control scheme experimentally, and demonstrate that the CMV can be bounded within one-fourth of the DC-link voltage.

Lentiviral gene ontology (LeGO) vectors equipped with novel drug-selectable fluorescent proteins: new building blocks for cell marking and multi-gene analysis.

Science.gov (United States)

Weber, K; Mock, U; Petrowitz, B; Bartsch, U; Fehse, B

2010-04-01

Vector-encoded fluorescent proteins (FPs) facilitate unambiguous identification or sorting of gene-modified cells by fluorescence-activated cell sorting (FACS). Exploiting this feature, we have recently developed lentiviral gene ontology (LeGO) vectors (www.LentiGO-Vectors.de) for multi-gene analysis in different target cells. In this study, we extend the LeGO principle by introducing 10 different drug-selectable FPs created by fusing one of the five selection marker (protecting against blasticidin, hygromycin, neomycin, puromycin and zeocin) and one of the five FP genes (Cerulean, eGFP, Venus, dTomato and mCherry). All tested fusion proteins allowed both fluorescence-mediated detection and drug-mediated selection of LeGO-transduced cells. Newly generated codon-optimized hygromycin- and neomycin-resistance genes showed improved expression as compared with their ancestors. New LeGO constructs were produced at titers >10(6) per ml (for non-concentrated supernatants). We show efficient combinatorial marking and selection of various cells, including mesenchymal stem cells, simultaneously transduced with different LeGO constructs. Inclusion of the cytomegalovirus early enhancer/chicken beta-actin promoter into LeGO vectors facilitated robust transgene expression in and selection of neural stem cells and their differentiated progeny. We suppose that the new drug-selectable markers combining advantages of FACS and drug selection are well suited for numerous applications and vector systems. Their inclusion into LeGO vectors opens new possibilities for (stem) cell tracking and functional multi-gene analysis.

Fault diagnosis of automobile hydraulic brake system using statistical features and support vector machines

Science.gov (United States)

Jegadeeshwaran, R.; Sugumaran, V.

2015-02-01

Hydraulic brakes in automobiles are important components for the safety of passengers; therefore, the brakes are a good subject for condition monitoring. The condition of the brake components can be monitored by using the vibration characteristics. On-line condition monitoring by using machine learning approach is proposed in this paper as a possible solution to such problems. The vibration signals for both good as well as faulty conditions of brakes were acquired from a hydraulic brake test setup with the help of a piezoelectric transducer and a data acquisition system. Descriptive statistical features were extracted from the acquired vibration signals and the feature selection was carried out using the C4.5 decision tree algorithm. There is no specific method to find the right number of features required for classification for a given problem. Hence an extensive study is needed to find the optimum number of features. The effect of the number of features was also studied, by using the decision tree as well as Support Vector Machines (SVM). The selected features were classified using the C-SVM and Nu-SVM with different kernel functions. The results are discussed and the conclusion of the study is presented.

CoSpa: A Co-training Approach for Spam Review Identification with Support Vector Machine

Directory of Open Access Journals (Sweden)

Wen Zhang

2016-03-01

Full Text Available Spam reviews are increasingly appearing on the Internet to promote sales or defame competitors by misleading consumers with deceptive opinions. This paper proposes a co-training approach called CoSpa (Co-training for Spam review identification to identify spam reviews by two views: one is the lexical terms derived from the textual content of the reviews and the other is the PCFG (Probabilistic Context-Free Grammars rules derived from a deep syntax analysis of the reviews. Using SVM (Support Vector Machine as the base classifier, we develop two strategies, CoSpa-C and CoSpa-U, embedded within the CoSpa approach. The CoSpa-C strategy selects unlabeled reviews classified with the largest confidence to augment the training dataset to retrain the classifier. The CoSpa-U strategy randomly selects unlabeled reviews with a uniform distribution of confidence. Experiments on the spam dataset and the deception dataset demonstrate that both the proposed CoSpa algorithms outperform the traditional SVM with lexical terms and PCFG rules in spam review identification. Moreover, the CoSpa-U strategy outperforms the CoSpa-C strategy when we use the absolute value of decision function of SVM as the confidence.

Shallow water bathymetry mapping using Support Vector Machine (SVM) technique and multispectral imagery

NARCIS (Netherlands)

Misra, Ankita; Vojinovic, Zoran; Ramakrishnan, Balaji; Luijendijk, Arjen; Ranasinghe, Roshanka

2018-01-01

Satellite imagery along with image processing techniques prove to be efficient tools for bathymetry retrieval as they provide time and cost-effective alternatives to traditional methods of water depth estimation. In this article, a nonlinear machine learning technique of Support Vector Machine (SVM)

Fast Monte Carlo reliability evaluation using support vector machine

International Nuclear Information System (INIS)

Rocco, Claudio M.; Moreno, Jose Ali

2002-01-01

This paper deals with the feasibility of using support vector machine (SVM) to build empirical models for use in reliability evaluation. The approach takes advantage of the speed of SVM in the numerous model calculations typically required to perform a Monte Carlo reliability evaluation. The main idea is to develop an estimation algorithm, by training a model on a restricted data set, and replace system performance evaluation by a simpler calculation, which provides reasonably accurate model outputs. The proposed approach is illustrated by several examples. Excellent system reliability results are obtained by training a SVM with a small amount of information

Predicting respiratory tumor motion with multi-dimensional adaptive filters and support vector regression

International Nuclear Information System (INIS)

Riaz, Nadeem; Wiersma, Rodney; Mao Weihua; Xing Lei; Shanker, Piyush; Gudmundsson, Olafur; Widrow, Bernard

2009-01-01

Intra-fraction tumor tracking methods can improve radiation delivery during radiotherapy sessions. Image acquisition for tumor tracking and subsequent adjustment of the treatment beam with gating or beam tracking introduces time latency and necessitates predicting the future position of the tumor. This study evaluates the use of multi-dimensional linear adaptive filters and support vector regression to predict the motion of lung tumors tracked at 30 Hz. We expand on the prior work of other groups who have looked at adaptive filters by using a general framework of a multiple-input single-output (MISO) adaptive system that uses multiple correlated signals to predict the motion of a tumor. We compare the performance of these two novel methods to conventional methods like linear regression and single-input, single-output adaptive filters. At 400 ms latency the average root-mean-square-errors (RMSEs) for the 14 treatment sessions studied using no prediction, linear regression, single-output adaptive filter, MISO and support vector regression are 2.58, 1.60, 1.58, 1.71 and 1.26 mm, respectively. At 1 s, the RMSEs are 4.40, 2.61, 3.34, 2.66 and 1.93 mm, respectively. We find that support vector regression most accurately predicts the future tumor position of the methods studied and can provide a RMSE of less than 2 mm at 1 s latency. Also, a multi-dimensional adaptive filter framework provides improved performance over single-dimension adaptive filters. Work is underway to combine these two frameworks to improve performance.

FUSION DECISION FOR A BIMODAL BIOMETRIC VERIFICATION SYSTEM USING SUPPORT VECTOR MACHINE AND ITS VARIATIONS

Directory of Open Access Journals (Sweden)

A. Teoh

2017-12-01

Full Text Available This paw presents fusion detection technique comparisons based on support vector machine and its variations for a bimodal biometric verification system that makes use of face images and speech utterances. The system is essentially constructed by a face expert, a speech expert and a fusion decision module. Each individual expert has been optimized to operate in automatic mode and designed for security access application. Fusion decision schemes considered are linear, weighted Support Vector Machine (SVM and linear SVM with quadratic transformation. The conditions tested include the balanced and unbalanced conditions between the two experts in order to obtain the optimum fusion module from  these techniques best suited to the target application.

Detection of surface cracking in steel pipes based on vibration data using a multi-class support vector machine classifier

Science.gov (United States)

Mustapha, S.; Braytee, A.; Ye, L.

2017-04-01

In this study, we focused at the development and verification of a robust framework for surface crack detection in steel pipes using measured vibration responses; with the presence of multiple progressive damage occurring in different locations within the structure. Feature selection, dimensionality reduction, and multi-class support vector machine were established for this purpose. Nine damage cases, at different locations, orientations and length, were introduced into the pipe structure. The pipe was impacted 300 times using an impact hammer, after each damage case, the vibration data were collected using 3 PZT wafers which were installed on the outer surface of the pipe. At first, damage sensitive features were extracted using the frequency response function approach followed by recursive feature elimination for dimensionality reduction. Then, a multi-class support vector machine learning algorithm was employed to train the data and generate a statistical model. Once the model is established, decision values and distances from the hyper-plane were generated for the new collected data using the trained model. This process was repeated on the data collected from each sensor. Overall, using a single sensor for training and testing led to a very high accuracy reaching 98% in the assessment of the 9 damage cases used in this study.

Phytoplankton global mapping from space with a support vector machine algorithm

Science.gov (United States)

de Boissieu, Florian; Menkes, Christophe; Dupouy, Cécile; Rodier, Martin; Bonnet, Sophie; Mangeas, Morgan; Frouin, Robert J.

2014-11-01

In recent years great progress has been made in global mapping of phytoplankton from space. Two main trends have emerged, the recognition of phytoplankton functional types (PFT) based on reflectance normalized to chlorophyll-a concentration, and the recognition of phytoplankton size class (PSC) based on the relationship between cell size and chlorophyll-a concentration. However, PFTs and PSCs are not decorrelated, and one approach can complement the other in a recognition task. In this paper, we explore the recognition of several dominant PFTs by combining reflectance anomalies, chlorophyll-a concentration and other environmental parameters, such as sea surface temperature and wind speed. Remote sensing pixels are labeled thanks to coincident in-situ pigment data from GeP&CO, NOMAD and MAREDAT datasets, covering various oceanographic environments. The recognition is made with a supervised Support Vector Machine classifier trained on the labeled pixels. This algorithm enables a non-linear separation of the classes in the input space and is especially adapted for small training datasets as available here. Moreover, it provides a class probability estimate, allowing one to enhance the robustness of the classification results through the choice of a minimum probability threshold. A greedy feature selection associated to a 10-fold cross-validation procedure is applied to select the most discriminative input features and evaluate the classification performance. The best classifiers are finally applied on daily remote sensing datasets (SeaWIFS, MODISA) and the resulting dominant PFT maps are compared with other studies. Several conclusions are drawn: (1) the feature selection highlights the weight of temperature, chlorophyll-a and wind speed variables in phytoplankton recognition; (2) the classifiers show good results and dominant PFT maps in agreement with phytoplankton distribution knowledge; (3) classification on MODISA data seems to perform better than on SeaWIFS data

Quantitative Assessment of Pap Smear Cells by PC-Based Cytopathologic Image Analysis System and Support Vector Machine

Science.gov (United States)

Huang, Po-Chi; Chan, Yung-Kuan; Chan, Po-Chou; Chen, Yung-Fu; Chen, Rung-Ching; Huang, Yu-Ruei

Cytologic screening has been widely used for controlling the prevalence of cervical cancer. Errors from sampling, screening and interpretation, still concealed some unpleasant results. This study aims at designing a cellular image analysis system based on feasible and available software and hardware for a routine cytologic laboratory. Totally 1814 cellular images from the liquid-based cervical smears with Papanicolaou stain in 100x, 200x, and 400x magnification were captured by a digital camera. Cell images were reviewed by pathologic experts with peer agreement and only 503 images were selected for further study. The images were divided into 4 diagnostic categories. A PC-based cellular image analysis system (PCCIA) was developed for computing morphometric parameters. Then support vector machine (SVM) was used to classify signature patterns. The results show that the selected 13 morphometric parameters can be used to correctly differentiate the dysplastic cells from the normal cells (pgynecologic cytologic specimens.

A novel representation for apoptosis protein subcellular localization prediction using support vector machine.

Science.gov (United States)

Zhang, Li; Liao, Bo; Li, Dachao; Zhu, Wen

2009-07-21

Apoptosis, or programmed cell death, plays an important role in development of an organism. Obtaining information on subcellular location of apoptosis proteins is very helpful to understand the apoptosis mechanism. In this paper, based on the concept that the position distribution information of amino acids is closely related with the structure and function of proteins, we introduce the concept of distance frequency [Matsuda, S., Vert, J.P., Ueda, N., Toh, H., Akutsu, T., 2005. A novel representation of protein sequences for prediction of subcellular location using support vector machines. Protein Sci. 14, 2804-2813] and propose a novel way to calculate distance frequencies. In order to calculate the local features, each protein sequence is separated into p parts with the same length in our paper. Then we use the novel representation of protein sequences and adopt support vector machine to predict subcellular location. The overall prediction accuracy is significantly improved by jackknife test.

Support Vector Regression-Based Adaptive Divided Difference Filter for Nonlinear State Estimation Problems

Directory of Open Access Journals (Sweden)

Hongjian Wang

2014-01-01

Full Text Available We present a support vector regression-based adaptive divided difference filter (SVRADDF algorithm for improving the low state estimation accuracy of nonlinear systems, which are typically affected by large initial estimation errors and imprecise prior knowledge of process and measurement noises. The derivative-free SVRADDF algorithm is significantly simpler to compute than other methods and is implemented using only functional evaluations. The SVRADDF algorithm involves the use of the theoretical and actual covariance of the innovation sequence. Support vector regression (SVR is employed to generate the adaptive factor to tune the noise covariance at each sampling instant when the measurement update step executes, which improves the algorithm’s robustness. The performance of the proposed algorithm is evaluated by estimating states for (i an underwater nonmaneuvering target bearing-only tracking system and (ii maneuvering target bearing-only tracking in an air-traffic control system. The simulation results show that the proposed SVRADDF algorithm exhibits better performance when compared with a traditional DDF algorithm.

QSPR studies for predicting polarity parameter of organic compounds in methanol using support vector machine and enhanced replacement method.

Science.gov (United States)

Golmohammadi, H; Dashtbozorgi, Z

2016-12-01

In the present work, enhanced replacement method (ERM) and support vector machine (SVM) were used for quantitative structure-property relationship (QSPR) studies of polarity parameter (p) of various organic compounds in methanol in reversed phase liquid chromatography based on molecular descriptors calculated from the optimized structures. Diverse kinds of molecular descriptors were calculated to encode the molecular structures of compounds, such as geometric, thermodynamic, electrostatic and quantum mechanical descriptors. The variable selection method of ERM was employed to select an optimum subset of descriptors. The five descriptors selected using ERM were used as inputs of SVM to predict the polarity parameter of organic compounds in methanol. The coefficient of determination, r 2 , between experimental and predicted polarity parameters for the prediction set by ERM and SVM were 0.952 and 0.982, respectively. Acceptable results specified that the ERM approach is a very effective method for variable selection and the predictive aptitude of the SVM model is superior to those obtained by ERM. The obtained results demonstrate that SVM can be used as a substitute influential modeling tool for QSPR studies.

Screw Remaining Life Prediction Based on Quantum Genetic Algorithm and Support Vector Machine

Directory of Open Access Journals (Sweden)

Xiaochen Zhang

2017-01-01

Full Text Available To predict the remaining life of ball screw, a screw remaining life prediction method based on quantum genetic algorithm (QGA and support vector machine (SVM is proposed. A screw accelerated test bench is introduced. Accelerometers are installed to monitor the performance degradation of ball screw. Combined with wavelet packet decomposition and isometric mapping (Isomap, the sensitive feature vectors are obtained and stored in database. Meanwhile, the sensitive feature vectors are randomly chosen from the database and constitute training samples and testing samples. Then the optimal kernel function parameter and penalty factor of SVM are searched with the method of QGA. Finally, the training samples are used to train optimized SVM while testing samples are adopted to test the prediction accuracy of the trained SVM so the screw remaining life prediction model can be got. The experiment results show that the screw remaining life prediction model could effectively predict screw remaining life.

Wormholes admitting conformal Killing vectors and supported by generalized Chaplygin gas

Energy Technology Data Exchange (ETDEWEB)

Kuhfittig, Peter K.F. [Milwaukee School of Engineering, Department of Mathematics, Milwaukee, WI (United States)

2015-08-15

When Morris and Thorne first proposed that traversable wormholes may be actual physical objects, they concentrated on the geometry by specifying the shape and redshift functions. This mathematical approach necessarily raises questions regarding the determination of the required stress-energy tensor. This paper discusses a natural way to obtain a complete wormhole solution by assuming that the wormhole (1) is supported by generalized Chaplygin gas and (2) admits conformal Killing vectors. (orig.)

ROBUSTNESS OF A FACE-RECOGNITION TECHNIQUE BASED ON SUPPORT VECTOR MACHINES

OpenAIRE

Prashanth Harshangi; Koshy George

2010-01-01

The ever-increasing requirements of security concerns have placed a greater demand for face recognition surveillance systems. However, most current face recognition techniques are not quite robust with respect to factors such as variable illumination, facial expression and detail, and noise in images. In this paper, we demonstrate that face recognition using support vector machines are sufficiently robust to different kinds of noise, does not require image pre-processing, and can be used with...

Water demand prediction using artificial neural networks and support vector regression

CSIR Research Space (South Africa)

Msiza, IS

2008-11-01

Full Text Available Neural Networks and Support Vector Regression Ishmael S. Msiza1, Fulufhelo V. Nelwamondo1,2, Tshilidzi Marwala3 . 1Modelling and Digital Science, CSIR, Johannesburg,SOUTH AFRICA 2Graduate School of Arts and Sciences, Harvard University, Cambridge..., Massachusetts, USA 3School of Electrical and Information Engineering, University of the Witwatersrand, Johannesburg, SOUTH AFRICA Email: imsiza@csir.co.za, nelwamon@fas.harvard.edu, tshilidzi.marwala@wits.ac.za Abstract— Computational Intelligence techniques...

Optimization of Support Vector Machine (SVM) for Object Classification

Science.gov (United States)

Scholten, Matthew; Dhingra, Neil; Lu, Thomas T.; Chao, Tien-Hsin

2012-01-01

The Support Vector Machine (SVM) is a powerful algorithm, useful in classifying data into species. The SVMs implemented in this research were used as classifiers for the final stage in a Multistage Automatic Target Recognition (ATR) system. A single kernel SVM known as SVMlight, and a modified version known as a SVM with K-Means Clustering were used. These SVM algorithms were tested as classifiers under varying conditions. Image noise levels varied, and the orientation of the targets changed. The classifiers were then optimized to demonstrate their maximum potential as classifiers. Results demonstrate the reliability of SVM as a method for classification. From trial to trial, SVM produces consistent results.

Fruit fly optimization based least square support vector regression for blind image restoration

Science.gov (United States)

Zhang, Jiao; Wang, Rui; Li, Junshan; Yang, Yawei

2014-11-01

The goal of image restoration is to reconstruct the original scene from a degraded observation. It is a critical and challenging task in image processing. Classical restorations require explicit knowledge of the point spread function and a description of the noise as priors. However, it is not practical for many real image processing. The recovery processing needs to be a blind image restoration scenario. Since blind deconvolution is an ill-posed problem, many blind restoration methods need to make additional assumptions to construct restrictions. Due to the differences of PSF and noise energy, blurring images can be quite different. It is difficult to achieve a good balance between proper assumption and high restoration quality in blind deconvolution. Recently, machine learning techniques have been applied to blind image restoration. The least square support vector regression (LSSVR) has been proven to offer strong potential in estimating and forecasting issues. Therefore, this paper proposes a LSSVR-based image restoration method. However, selecting the optimal parameters for support vector machine is essential to the training result. As a novel meta-heuristic algorithm, the fruit fly optimization algorithm (FOA) can be used to handle optimization problems, and has the advantages of fast convergence to the global optimal solution. In the proposed method, the training samples are created from a neighborhood in the degraded image to the central pixel in the original image. The mapping between the degraded image and the original image is learned by training LSSVR. The two parameters of LSSVR are optimized though FOA. The fitness function of FOA is calculated by the restoration error function. With the acquired mapping, the degraded image can be recovered. Experimental results show the proposed method can obtain satisfactory restoration effect. Compared with BP neural network regression, SVR method and Lucy-Richardson algorithm, it speeds up the restoration rate and

Modeling DNA affinity landscape through two-round support vector regression with weighted degree kernels

KAUST Repository

Wang, Xiaolei; Kuwahara, Hiroyuki; Gao, Xin

2014-01-01

high-quality estimates of such complex affinity landscapes is, thus, essential to the control of gene expression and the advance of synthetic biology. Results: Here, we propose a two-round prediction method that is based on support vector regression

On-line transient stability assessment of large-scale power systems by using ball vector machines

International Nuclear Information System (INIS)

Mohammadi, M.; Gharehpetian, G.B.

2010-01-01

In this paper ball vector machine (BVM) has been used for on-line transient stability assessment of large-scale power systems. To classify the system transient security status, a BVM has been trained for all contingencies. The proposed BVM based security assessment algorithm has very small training time and space in comparison with artificial neural networks (ANN), support vector machines (SVM) and other machine learning based algorithms. In addition, the proposed algorithm has less support vectors (SV) and therefore is faster than existing algorithms for on-line applications. One of the main points, to apply a machine learning method is feature selection. In this paper, a new Decision Tree (DT) based feature selection technique has been presented. The proposed BVM based algorithm has been applied to New England 39-bus power system. The simulation results show the effectiveness and the stability of the proposed method for on-line transient stability assessment procedure of large-scale power system. The proposed feature selection algorithm has been compared with different feature selection algorithms. The simulation results demonstrate the effectiveness of the proposed feature algorithm.

Vector Network Coding

OpenAIRE

Ebrahimi, Javad; Fragouli, Christina

2010-01-01

We develop new algebraic algorithms for scalar and vector network coding. In vector network coding, the source multicasts information by transmitting vectors of length L, while intermediate nodes process and combine their incoming packets by multiplying them with L X L coding matrices that play a similar role as coding coefficients in scalar coding. Our algorithms for scalar network jointly optimize the employed field size while selecting the coding coefficients. Similarly, for vector co...

Pair- ${v}$ -SVR: A Novel and Efficient Pairing nu-Support Vector Regression Algorithm.

Science.gov (United States)

Hao, Pei-Yi

This paper proposes a novel and efficient pairing nu-support vector regression (pair--SVR) algorithm that combines successfully the superior advantages of twin support vector regression (TSVR) and classical -SVR algorithms. In spirit of TSVR, the proposed pair--SVR solves two quadratic programming problems (QPPs) of smaller size rather than a single larger QPP, and thus has faster learning speed than classical -SVR. The significant advantage of our pair--SVR over TSVR is the improvement in the prediction speed and generalization ability by introducing the concepts of the insensitive zone and the regularization term that embodies the essence of statistical learning theory. Moreover, pair--SVR has additional advantage of using parameter for controlling the bounds on fractions of SVs and errors. Furthermore, the upper bound and lower bound functions of the regression model estimated by pair--SVR capture well the characteristics of data distributions, thus facilitating automatic estimation of the conditional mean and predictive variance simultaneously. This may be useful in many cases, especially when the noise is heteroscedastic and depends strongly on the input values. The experimental results validate the superiority of our pair--SVR in both training/prediction speed and generalization ability.This paper proposes a novel and efficient pairing nu-support vector regression (pair--SVR) algorithm that combines successfully the superior advantages of twin support vector regression (TSVR) and classical -SVR algorithms. In spirit of TSVR, the proposed pair--SVR solves two quadratic programming problems (QPPs) of smaller size rather than a single larger QPP, and thus has faster learning speed than classical -SVR. The significant advantage of our pair--SVR over TSVR is the improvement in the prediction speed and generalization ability by introducing the concepts of the insensitive zone and the regularization term that embodies the essence of statistical learning theory

Support vector regression for porosity prediction in a heterogeneous reservoir: A comparative study

Science.gov (United States)

Al-Anazi, A. F.; Gates, I. D.

2010-12-01

In wells with limited log and core data, porosity, a fundamental and essential property to characterize reservoirs, is challenging to estimate by conventional statistical methods from offset well log and core data in heterogeneous formations. Beyond simple regression, neural networks have been used to develop more accurate porosity correlations. Unfortunately, neural network-based correlations have limited generalization ability and global correlations for a field are usually less accurate compared to local correlations for a sub-region of the reservoir. In this paper, support vector machines are explored as an intelligent technique to correlate porosity to well log data. Recently, support vector regression (SVR), based on the statistical learning theory, have been proposed as a new intelligence technique for both prediction and classification tasks. The underlying formulation of support vector machines embodies the structural risk minimization (SRM) principle which has been shown to be superior to the traditional empirical risk minimization (ERM) principle employed by conventional neural networks and classical statistical methods. This new formulation uses margin-based loss functions to control model complexity independently of the dimensionality of the input space, and kernel functions to project the estimation problem to a higher dimensional space, which enables the solution of more complex nonlinear problem optimization methods to exist for a globally optimal solution. SRM minimizes an upper bound on the expected risk using a margin-based loss function ( ɛ-insensitivity loss function for regression) in contrast to ERM which minimizes the error on the training data. Unlike classical learning methods, SRM, indexed by margin-based loss function, can also control model complexity independent of dimensionality. The SRM inductive principle is designed for statistical estimation with finite data where the ERM inductive principle provides the optimal solution (the

A support vector machine (SVM) based voltage stability classifier

Energy Technology Data Exchange (ETDEWEB)

Dosano, R.D.; Song, H. [Kunsan National Univ., Kunsan, Jeonbuk (Korea, Republic of); Lee, B. [Korea Univ., Seoul (Korea, Republic of)

2007-07-01

Power system stability has become even more complex and critical with the advent of deregulated energy markets and the growing desire to completely employ existing transmission and infrastructure. The economic pressure on electricity markets forces the operation of power systems and components to their limit of capacity and performance. System conditions can be more exposed to instability due to greater uncertainty in day to day system operations and increase in the number of potential components for system disturbances potentially resulting in voltage stability. This paper proposed a support vector machine (SVM) based power system voltage stability classifier using local measurements of voltage and active power of load. It described the procedure for fast classification of long-term voltage stability using the SVM algorithm. The application of the SVM based voltage stability classifier was presented with reference to the choice of input parameters; input data preconditioning; moving window for feature vector; determination of learning samples; and other considerations in SVM applications. The paper presented a case study with numerical examples of an 11-bus test system. The test results for the feasibility study demonstrated that the classifier could offer an excellent performance in classification with time-series measurements in terms of long-term voltage stability. 9 refs., 14 figs.

A Bayesian least-squares support vector machine method for predicting the remaining useful life of a microwave component

Directory of Open Access Journals (Sweden)

Fuqiang Sun

2017-01-01

Full Text Available Rapid and accurate lifetime prediction of critical components in a system is important to maintaining the system’s reliable operation. To this end, many lifetime prediction methods have been developed to handle various failure-related data collected in different situations. Among these methods, machine learning and Bayesian updating are the most popular ones. In this article, a Bayesian least-squares support vector machine method that combines least-squares support vector machine with Bayesian inference is developed for predicting the remaining useful life of a microwave component. A degradation model describing the change in the component’s power gain over time is developed, and the point and interval remaining useful life estimates are obtained considering a predefined failure threshold. In our case study, the radial basis function neural network approach is also implemented for comparison purposes. The results indicate that the Bayesian least-squares support vector machine method is more precise and stable in predicting the remaining useful life of this type of components.

Targeting of breast metastases using a viral gene vector with tumour-selective transcription.

LENUS (Irish Health Repository)

Rajendran, Simon

2012-01-31

BACKGROUND: Adeno-associated virus (AAV) vectors have significant potential as gene delivery vectors for cancer gene therapy. However, broad AAV2 tissue tropism results in nonspecific gene expression. MATERIALS AND METHODS: We investigated use of the C-X-C chemokine receptor type 4 (CXCR4) promoter to restrict AAV expression to tumour cells, in subcutaneous MCF-7 xenograft mouse models of breast cancer and in patient samples, using bioluminescent imaging and flow cytometric analysis. RESULTS: Higher transgene expression levels were observed in subcutaneous MCF-7 tumours relative to normal tissue (muscle) using the CXCR4 promoter, unlike a ubiquitously expressing Cytomegalovirus promoter construct, with preferential AAVCXCR4 expression in epithelial tumour and CXCR4-positive cells. Transgene expression following intravenously administered AAVCXCR4 in a model of liver metastasis was detected specifically in livers of tumour bearing mice. Ex vivo analysis using patient samples also demonstrated higher AAVCXCR4 expression in tumour compared with normal liver tissue. CONCLUSION: This study demonstrates for the first time, the potential for systemic administration of AAV2 vector for tumour-selective gene therapy.

Data-driven process monitoring and diagnosis with support vector data description

OpenAIRE

Tafazzoli Moghaddam, Esmaeil

2011-01-01

This thesis targets the problem of fault diagnosis of industrial processes with data-drivenapproaches. In this context, a class of problems are considered in which the only informationabout the process is in the form of data and no model is available due to complexity of theprocess. Support vector data description is a kernel based method recently proposed in the fieldof pattern recognition and it is known for its powerful capabilities in nonlinear data classificationwhich can be exploited in...

A Genetic Algorithm Based Support Vector Machine Model for Blood-Brain Barrier Penetration Prediction

Directory of Open Access Journals (Sweden)

Daqing Zhang

2015-01-01

Full Text Available Blood-brain barrier (BBB is a highly complex physical barrier determining what substances are allowed to enter the brain. Support vector machine (SVM is a kernel-based machine learning method that is widely used in QSAR study. For a successful SVM model, the kernel parameters for SVM and feature subset selection are the most important factors affecting prediction accuracy. In most studies, they are treated as two independent problems, but it has been proven that they could affect each other. We designed and implemented genetic algorithm (GA to optimize kernel parameters and feature subset selection for SVM regression and applied it to the BBB penetration prediction. The results show that our GA/SVM model is more accurate than other currently available log BB models. Therefore, to optimize both SVM parameters and feature subset simultaneously with genetic algorithm is a better approach than other methods that treat the two problems separately. Analysis of our log BB model suggests that carboxylic acid group, polar surface area (PSA/hydrogen-bonding ability, lipophilicity, and molecular charge play important role in BBB penetration. Among those properties relevant to BBB penetration, lipophilicity could enhance the BBB penetration while all the others are negatively correlated with BBB penetration.

PVP-SVM: Sequence-Based Prediction of Phage Virion Proteins Using a Support Vector Machine.

Science.gov (United States)

Manavalan, Balachandran; Shin, Tae H; Lee, Gwang

2018-01-01

Accurately identifying bacteriophage virion proteins from uncharacterized sequences is important to understand interactions between the phage and its host bacteria in order to develop new antibacterial drugs. However, identification of such proteins using experimental techniques is expensive and often time consuming; hence, development of an efficient computational algorithm for the prediction of phage virion proteins (PVPs) prior to in vitro experimentation is needed. Here, we describe a support vector machine (SVM)-based PVP predictor, called PVP-SVM, which was trained with 136 optimal features. A feature selection protocol was employed to identify the optimal features from a large set that included amino acid composition, dipeptide composition, atomic composition, physicochemical properties, and chain-transition-distribution. PVP-SVM achieved an accuracy of 0.870 during leave-one-out cross-validation, which was 6% higher than control SVM predictors trained with all features, indicating the efficiency of the feature selection method. Furthermore, PVP-SVM displayed superior performance compared to the currently available method, PVPred, and two other machine-learning methods developed in this study when objectively evaluated with an independent dataset. For the convenience of the scientific community, a user-friendly and publicly accessible web server has been established at www.thegleelab.org/PVP-SVM/PVP-SVM.html.

PVP-SVM: Sequence-Based Prediction of Phage Virion Proteins Using a Support Vector Machine

Directory of Open Access Journals (Sweden)

Balachandran Manavalan

2018-03-01

Full Text Available Accurately identifying bacteriophage virion proteins from uncharacterized sequences is important to understand interactions between the phage and its host bacteria in order to develop new antibacterial drugs. However, identification of such proteins using experimental techniques is expensive and often time consuming; hence, development of an efficient computational algorithm for the prediction of phage virion proteins (PVPs prior to in vitro experimentation is needed. Here, we describe a support vector machine (SVM-based PVP predictor, called PVP-SVM, which was trained with 136 optimal features. A feature selection protocol was employed to identify the optimal features from a large set that included amino acid composition, dipeptide composition, atomic composition, physicochemical properties, and chain-transition-distribution. PVP-SVM achieved an accuracy of 0.870 during leave-one-out cross-validation, which was 6% higher than control SVM predictors trained with all features, indicating the efficiency of the feature selection method. Furthermore, PVP-SVM displayed superior performance compared to the currently available method, PVPred, and two other machine-learning methods developed in this study when objectively evaluated with an independent dataset. For the convenience of the scientific community, a user-friendly and publicly accessible web server has been established at www.thegleelab.org/PVP-SVM/PVP-SVM.html.

A potential food-grade cloning vector for Streptococcus thermophilus that uses cadmium resistance as the selectable marker.

Science.gov (United States)

Wong, Wing Yee; Su, Ping; Allison, Gwen E; Liu, Chun-Qiang; Dunn, Noel W

2003-10-01

A potential food-grade cloning vector, pND919, was constructed and transformed into S. thermophilus ST3-1, a plasmid-free strain. The vector contains DNAs from two different food-approved organisms, Streptococcus thermophilus and Lactococcus lactis. The 5.0-kb pND919 is a derivative of the cloning vector pND918 (9.3 kb) and was constructed by deletion of the 4.3-kb region of pND918 which contained DNA from non-food-approved organisms. pND919 carries a heterologous native cadmium resistance selectable marker from L. lactis M71 and expresses the Cd(r) phenotype in S. thermophilus transformants. With the S. thermophilus replicon derived from the shuttle vector pND913, pND919 is able to replicate in the two S. thermophilus industrial strains tested, ST3-1 and ST4-1. Its relatively high retention rate in S. thermophilus further indicates its usefulness as a potential food-grade cloning vector. To our knowledge, this is the first report of a replicative potential food-grade vector for the industrially important organism S. thermophilus.

Predicting Tunnel Squeezing Using Multiclass Support Vector Machines

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Yang Sun

2018-01-01

Full Text Available Tunnel squeezing is one of the major geological disasters that often occur during the construction of tunnels in weak rock masses subjected to high in situ stresses. It could cause shield jamming, budget overruns, and construction delays and could even lead to tunnel instability and casualties. Therefore, accurate prediction or identification of tunnel squeezing is extremely important in the design and construction of tunnels. This study presents a modified application of a multiclass support vector machine (SVM to predict tunnel squeezing based on four parameters, that is, diameter (D, buried depth (H, support stiffness (K, and rock tunneling quality index (Q. We compiled a database from the literature, including 117 case histories obtained from different countries such as India, Nepal, and Bhutan, to train the multiclass SVM model. The proposed model was validated using 8-fold cross validation, and the average error percentage was approximately 11.87%. Compared with existing approaches, the proposed multiclass SVM model yields a better performance in predictive accuracy. More importantly, one could estimate the severity of potential squeezing problems based on the predicted squeezing categories/classes.

CLASSIFICATION OF ENTREPRENEURIAL INTENTIONS BY NEURAL NETWORKS, DECISION TREES AND SUPPORT VECTOR MACHINES

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Marijana Zekić-Sušac

2010-12-01

Full Text Available Entrepreneurial intentions of students are important to recognize during the study in order to provide those students with educational background that will support such intentions and lead them to successful entrepreneurship after the study. The paper aims to develop a model that will classify students according to their entrepreneurial intentions by benchmarking three machine learning classifiers: neural networks, decision trees, and support vector machines. A survey was conducted at a Croatian university including a sample of students at the first year of study. Input variables described students’ demographics, importance of business objectives, perception of entrepreneurial carrier, and entrepreneurial predispositions. Due to a large dimension of input space, a feature selection method was used in the pre-processing stage. For comparison reasons, all tested models were validated on the same out-of-sample dataset, and a cross-validation procedure for testing generalization ability of the models was conducted. The models were compared according to its classification accuracy, as well according to input variable importance. The results show that although the best neural network model produced the highest average hit rate, the difference in performance is not statistically significant. All three models also extract similar set of features relevant for classifying students, which can be suggested to be taken into consideration by universities while designing their academic programs.

Oviposition Site Selection by the Dengue Vector Aedes aegypti and Its Implications for Dengue Control

Science.gov (United States)

Wong, Jacklyn; Stoddard, Steven T.; Astete, Helvio; Morrison, Amy C.; Scott, Thomas W.

2011-01-01

Background Because no dengue vaccine or antiviral therapy is commercially available, controlling the primary mosquito vector, Aedes aegypti, is currently the only means to prevent dengue outbreaks. Traditional models of Ae. aegypti assume that population dynamics are regulated by density-dependent larval competition for food and little affected by oviposition behavior. Due to direct impacts on offspring survival and development, however, mosquito choice in oviposition site can have important consequences for population regulation that should be taken into account when designing vector control programs. Methodology/Principal Findings We examined oviposition patterns by Ae. aegypti among 591 naturally occurring containers and a set of experimental containers in Iquitos, Peru. Using larval starvation bioassays as an indirect measure of container food content, we assessed whether females select containers with the most food for their offspring. Our data indicate that choice of egg-laying site is influenced by conspecific larvae and pupae, container fill method, container size, lid, and sun exposure. Although larval food positively influenced oviposition, our results did not support the hypothesis that females act primarily to maximize food for larvae. Females were most strongly attracted to sites containing immature conspecifics, even when potential competitors for their progeny were present in abundance. Conclusion/Significance Due to strong conspecific attraction, egg-laying behavior may contribute more to regulating Ae. aegypti populations than previously thought. If highly infested containers are targeted for removal or larvicide application, females that would have preferentially oviposited in those sites may instead distribute their eggs among other suitable, previously unoccupied containers. Strategies that kill mosquitoes late in their development (i.e., insect growth regulators that kill pupae rather than larvae) will enhance vector control by creating �

Vision-Based Perception and Classification of Mosquitoes Using Support Vector Machine

Directory of Open Access Journals (Sweden)

Masataka Fuchida

2017-01-01

Full Text Available The need for a novel automated mosquito perception and classification method is becoming increasingly essential in recent years, with steeply increasing number of mosquito-borne diseases and associated casualties. There exist remote sensing and GIS-based methods for mapping potential mosquito inhabitants and locations that are prone to mosquito-borne diseases, but these methods generally do not account for species-wise identification of mosquitoes in closed-perimeter regions. Traditional methods for mosquito classification involve highly manual processes requiring tedious sample collection and supervised laboratory analysis. In this research work, we present the design and experimental validation of an automated vision-based mosquito classification module that can deploy in closed-perimeter mosquito inhabitants. The module is capable of identifying mosquitoes from other bugs such as bees and flies by extracting the morphological features, followed by support vector machine-based classification. In addition, this paper presents the results of three variants of support vector machine classifier in the context of mosquito classification problem. This vision-based approach to the mosquito classification problem presents an efficient alternative to the conventional methods for mosquito surveillance, mapping and sample image collection. Experimental results involving classification between mosquitoes and a predefined set of other bugs using multiple classification strategies demonstrate the efficacy and validity of the proposed approach with a maximum recall of 98%.

Kennard-Stone combined with least square support vector machine method for noncontact discriminating human blood species

Science.gov (United States)

Zhang, Linna; Li, Gang; Sun, Meixiu; Li, Hongxiao; Wang, Zhennan; Li, Yingxin; Lin, Ling

2017-11-01

Identifying whole bloods to be either human or nonhuman is an important responsibility for import-export ports and inspection and quarantine departments. Analytical methods and DNA testing methods are usually destructive. Previous studies demonstrated that visible diffuse reflectance spectroscopy method can realize noncontact human and nonhuman blood discrimination. An appropriate method for calibration set selection was very important for a robust quantitative model. In this paper, Random Selection (RS) method and Kennard-Stone (KS) method was applied in selecting samples for calibration set. Moreover, proper stoichiometry method can be greatly beneficial for improving the performance of classification model or quantification model. Partial Least Square Discrimination Analysis (PLSDA) method was commonly used in identification of blood species with spectroscopy methods. Least Square Support Vector Machine (LSSVM) was proved to be perfect for discrimination analysis. In this research, PLSDA method and LSSVM method was used for human blood discrimination. Compared with the results of PLSDA method, this method could enhance the performance of identified models. The overall results convinced that LSSVM method was more feasible for identifying human and animal blood species, and sufficiently demonstrated LSSVM method was a reliable and robust method for human blood identification, and can be more effective and accurate.

Fault Diagnosis of a Reconfigurable Crawling–Rolling Robot Based on Support Vector Machines

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Karthikeyan Elangovan

2017-10-01

Full Text Available As robots begin to perform jobs autonomously, with minimal or no human intervention, a new challenge arises: robots also need to autonomously detect errors and recover from faults. In this paper, we present a Support Vector Machine (SVM-based fault diagnosis system for a bio-inspired reconfigurable robot named Scorpio. The diagnosis system needs to detect and classify faults while Scorpio uses its crawling and rolling locomotion modes. Specifically, we classify between faulty and non-faulty conditions by analyzing onboard Inertial Measurement Unit (IMU sensor data. The data capture nine different locomotion gaits, which include rolling and crawling modes, at three different speeds. Statistical methods are applied to extract features and to reduce the dimensionality of original IMU sensor data features. These statistical features were given as inputs for training and testing. Additionally, the c-Support Vector Classification (c-SVC and nu-SVC models of SVM, and their fault classification accuracies, were compared. The results show that the proposed SVM approach can be used to autonomously diagnose locomotion gait faults while the reconfigurable robot is in operation.

Non-linear HVAC computations using least square support vector machines

International Nuclear Information System (INIS)

Kumar, Mahendra; Kar, I.N.

2009-01-01

This paper aims to demonstrate application of least square support vector machines (LS-SVM) to model two complex heating, ventilating and air-conditioning (HVAC) relationships. The two applications considered are the estimation of the predicted mean vote (PMV) for thermal comfort and the generation of psychrometric chart. LS-SVM has the potential for quick, exact representations and also possesses a structure that facilitates hardware implementation. The results show very good agreement between function values computed from conventional model and LS-SVM model in real time. The robustness of LS-SVM models against input noises has also been analyzed.

SVM-Maj: a majorization approach to linear support vector machines with different hinge errors

NARCIS (Netherlands)

P.J.F. Groenen (Patrick); G.I. Nalbantov (Georgi); J.C. Bioch (Cor)

2007-01-01

textabstractSupport vector machines (SVM) are becoming increasingly popular for the prediction of a binary dependent variable. SVMs perform very well with respect to competing techniques. Often, the solution of an SVM is obtained by switching to the dual. In this paper, we stick to the primal

Learning Algorithms for Audio and Video Processing: Independent Component Analysis and Support Vector Machine Based Approaches

National Research Council Canada - National Science Library

Qi, Yuan

2000-01-01

In this thesis, we propose two new machine learning schemes, a subband-based Independent Component Analysis scheme and a hybrid Independent Component Analysis/Support Vector Machine scheme, and apply...

The Weighted Support Vector Machine Based on Hybrid Swarm Intelligence Optimization for Icing Prediction of Transmission Line

Directory of Open Access Journals (Sweden)

Xiaomin Xu

2015-01-01

Full Text Available Not only can the icing coat on transmission line cause the electrical fault of gap discharge and icing flashover but also it will lead to the mechanical failure of tower, conductor, insulators, and others. It will bring great harm to the people’s daily life and work. Thus, accurate prediction of ice thickness has important significance for power department to control the ice disaster effectively. Based on the analysis of standard support vector machine, this paper presents a weighted support vector machine regression model based on the similarity (WSVR. According to the different importance of samples, this paper introduces the weighted support vector machine and optimizes its parameters by hybrid swarm intelligence optimization algorithm with the particle swarm and ant colony (PSO-ACO, which improves the generalization ability of the model. In the case study, the actual data of ice thickness and climate in a certain area of Hunan province have been used to predict the icing thickness of the area, which verifies the validity and applicability of this proposed method. The predicted results show that the intelligent model proposed in this paper has higher precision and stronger generalization ability.

Urban Heat Island Growth Modeling Using Artificial Neural Networks and Support Vector Regression: A case study of Tehran, Iran

Science.gov (United States)

Sherafati, Sh. A.; Saradjian, M. R.; Niazmardi, S.

2013-09-01

divided to several parts and for each part a specific CA model has defined. In the training step some pixels have randomly selected to calibrate the neural network and the regression. Then, using the trained neural network and support vector regression, LST in year 2007 has retrieved for all pixels. Results have indicated a great relationship between the simulated LST and the real one which has retrieved from thermal band of satellite image in 2007 (r = 0.843 for ANN method and r = 0.856 for SVR method). Although SVR caused to a better result, this method is much more time consuming than ANN method, especially when the number of training pixels increase.

Landslide susceptibility mapping & prediction using Support Vector Machine for Mandakini River Basin, Garhwal Himalaya, India

Science.gov (United States)

Kumar, Deepak; Thakur, Manoj; Dubey, Chandra S.; Shukla, Dericks P.

2017-10-01

In recent years, various machine learning techniques have been applied for landslide susceptibility mapping. In this study, three different variants of support vector machine viz., SVM, Proximal Support Vector Machine (PSVM) and L2-Support Vector Machine - Modified Finite Newton (L2-SVM-MFN) have been applied on the Mandakini River Basin in Uttarakhand, India to carry out the landslide susceptibility mapping. Eight thematic layers such as elevation, slope, aspect, drainages, geology/lithology, buffer of thrusts/faults, buffer of streams and soil along with the past landslide data were mapped in GIS environment and used for landslide susceptibility mapping in MATLAB. The study area covering 1625 km2 has merely 0.11% of area under landslides. There are 2009 pixels for past landslides out of which 50% (1000) landslides were considered as training set while remaining 50% as testing set. The performance of these techniques has been evaluated and the computational results show that L2-SVM-MFN obtains higher prediction values (0.829) of receiver operating characteristic curve (AUC-area under the curve) as compared to 0.807 for PSVM model and 0.79 for SVM. The results obtained from L2-SVM-MFN model are found to be superior than other SVM prediction models and suggest the usefulness of this technique to problem of landslide susceptibility mapping where training data is very less. However, these techniques can be used for satisfactory determination of susceptible zones with these inputs.

KOMPARASI MODEL SUPPORT VECTOR MACHINES (SVM DAN NEURAL NETWORK UNTUK MENGETAHUI TINGKAT AKURASI PREDIKSI TERTINGGI HARGA SAHAM

Directory of Open Access Journals (Sweden)

R. Hadapiningradja Kusumodestoni

2017-09-01

Full Text Available There are many types of investments to make money, one of which is in the form of shares. Shares is a trading company dealing with securities in the global capital markets. Stock Exchange or also called stock market is actually the activities of private companies in the form of buying and selling investments. To avoid losses in investing, we need a model of predictive analysis with high accuracy and supported by data - lots of data and accurately. The correct techniques in the analysis will be able to reduce the risk for investors in investing. There are many models used in the analysis of stock price movement prediction, in this study the researchers used models of neural networks (NN and a model of support vector machine (SVM. Based on the background of the problems that have been mentioned in the previous description it can be formulated the problem as follows: need an algorithm that can predict stock prices, and need a high accuracy rate by adding a data set on the prediction, two algorithms will be investigated expected results last researchers can deduce where the algorithm accuracy rate predictions are the highest or accurate, then the purpose of this study was to mengkomparasi or compare between the two algorithms are algorithms Neural Network algorithm and Support Vector Machine which later on the end result has an accuracy rate forecast stock prices highest to see the error value RMSEnya. After doing research using the model of neural network and model of support vector machine (SVM to predict the stock using the data value of the shares on the stock index hongkong dated July 20, 2016 at 16:26 pm until the date of 15 September 2016 at 17:40 pm as many as 729 data sets within an interval of 5 minute through a process of training, learning, and then continue the process of testing so the result is that by using a neural network model of the prediction accuracy of 0.503 +/- 0.009 (micro 503 while using the model of support vector machine

Large-scale ligand-based predictive modelling using support vector machines.

Science.gov (United States)

Alvarsson, Jonathan; Lampa, Samuel; Schaal, Wesley; Andersson, Claes; Wikberg, Jarl E S; Spjuth, Ola

2016-01-01

The increasing size of datasets in drug discovery makes it challenging to build robust and accurate predictive models within a reasonable amount of time. In order to investigate the effect of dataset sizes on predictive performance and modelling time, ligand-based regression models were trained on open datasets of varying sizes of up to 1.2 million chemical structures. For modelling, two implementations of support vector machines (SVM) were used. Chemical structures were described by the signatures molecular descriptor. Results showed that for the larger datasets, the LIBLINEAR SVM implementation performed on par with the well-established libsvm with a radial basis function kernel, but with dramatically less time for model building even on modest computer resources. Using a non-linear kernel proved to be infeasible for large data sizes, even with substantial computational resources on a computer cluster. To deploy the resulting models, we extended the Bioclipse decision support framework to support models from LIBLINEAR and made our models of logD and solubility available from within Bioclipse.

2D Quantitative Structure-Property Relationship Study of Mycotoxins by Multiple Linear Regression and Support Vector Machine

Directory of Open Access Journals (Sweden)

Fereshteh Shiri

2010-08-01

Full Text Available In the present work, support vector machines (SVMs and multiple linear regression (MLR techniques were used for quantitative structure–property relationship (QSPR studies of retention time (tR in standardized liquid chromatography–UV–mass spectrometry of 67 mycotoxins (aflatoxins, trichothecenes, roquefortines and ochratoxins based on molecular descriptors calculated from the optimized 3D structures. By applying missing value, zero and multicollinearity tests with a cutoff value of 0.95, and genetic algorithm method of variable selection, the most relevant descriptors were selected to build QSPR models. MLRand SVMs methods were employed to build QSPR models. The robustness of the QSPR models was characterized by the statistical validation and applicability domain (AD. The prediction results from the MLR and SVM models are in good agreement with the experimental values. The correlation and predictability measure by r2 and q2 are 0.931 and 0.932, repectively, for SVM and 0.923 and 0.915, respectively, for MLR. The applicability domain of the model was investigated using William’s plot. The effects of different descriptors on the retention times are described.

Using support vector regression to predict PM10 and PM2.5

International Nuclear Information System (INIS)

Weizhen, Hou; Zhengqiang, Li; Yuhuan, Zhang; Hua, Xu; Ying, Zhang; Kaitao, Li; Donghui, Li; Peng, Wei; Yan, Ma

2014-01-01

Support vector machine (SVM), as a novel and powerful machine learning tool, can be used for the prediction of PM 10 and PM 2.5 (particulate matter less or equal than 10 and 2.5 micrometer) in the atmosphere. This paper describes the development of a successive over relaxation support vector regress (SOR-SVR) model for the PM 10 and PM 2.5 prediction, based on the daily average aerosol optical depth (AOD) and meteorological parameters (atmospheric pressure, relative humidity, air temperature, wind speed), which were all measured in Beijing during the year of 2010–2012. The Gaussian kernel function, as well as the k-fold crosses validation and grid search method, are used in SVR model to obtain the optimal parameters to get a better generalization capability. The result shows that predicted values by the SOR-SVR model agree well with the actual data and have a good generalization ability to predict PM 10 and PM 2.5 . In addition, AOD plays an important role in predicting particulate matter with SVR model, which should be included in the prediction model. If only considering the meteorological parameters and eliminating AOD from the SVR model, the prediction results of predict particulate matter will be not satisfying

Sentiment Analysis of Comments on Rohingya Movement with Support Vector Machine

OpenAIRE

Chowdhury, Hemayet Ahmed; Nibir, Tanvir Alam; Islam, Md. Saiful

2018-01-01

The Rohingya Movement and Crisis caused a huge uproar in the political and economic state of Bangladesh. Refugee movement is a recurring event and a large amount of data in the form of opinions remains on social media such as Facebook, with very little analysis done on them.To analyse the comments based on all Rohingya related posts, we had to create and modify a classifier based on the Support Vector Machine algorithm. The code is implemented in python and uses scikit-learn library. A datase...

[Extraction Optimization of Rhizome of Curcuma longa by Response Surface Methodology and Support Vector Regression].

Science.gov (United States)

Zhou, Pei-pei; Shan, Jin-feng; Jiang, Jian-lan

2015-12-01

To optimize the optimal microwave-assisted extraction method of curcuminoids from Curcuma longa. On the base of single factor experiment, the ethanol concentration, the ratio of liquid to solid and the microwave time were selected for further optimization. Support Vector Regression (SVR) and Central Composite Design-Response Surface Methodology (CCD) algorithm were utilized to design and establish models respectively, while Particle Swarm Optimization (PSO) was introduced to optimize the parameters of SVR models and to search optimal points of models. The evaluation indicator, the sum of curcumin, demethoxycurcumin and bisdemethoxycurcumin by HPLC, were used. The optimal parameters of microwave-assisted extraction were as follows: ethanol concentration of 69%, ratio of liquid to solid of 21 : 1, microwave time of 55 s. On those conditions, the sum of three curcuminoids was 28.97 mg/g (per gram of rhizomes powder). Both the CCD model and the SVR model were credible, for they have predicted the similar process condition and the deviation of yield were less than 1.2%.

An empirical comparison of different approaches for combining multimodal neuroimaging data with support vector machine

NARCIS (Netherlands)

Pettersson-Yeo, W.; Benetti, S.; Marquand, A.F.; Joules, R.; Catani, M.; Williams, S.C.; Allen, P.; McGuire, P.; Mechelli, A.

2014-01-01

In the pursuit of clinical utility, neuroimaging researchers of psychiatric and neurological illness are increasingly using analyses, such as support vector machine, that allow inference at the single-subject level. Recent studies employing single-modality data, however, suggest that classification

Support vector machine based battery model for electric vehicles

International Nuclear Information System (INIS)

Wang Junping; Chen Quanshi; Cao Binggang

2006-01-01

The support vector machine (SVM) is a novel type of learning machine based on statistical learning theory that can map a nonlinear function successfully. As a battery is a nonlinear system, it is difficult to establish the relationship between the load voltage and the current under different temperatures and state of charge (SOC). The SVM is used to model the battery nonlinear dynamics in this paper. Tests are performed on an 80Ah Ni/MH battery pack with the Federal Urban Driving Schedule (FUDS) cycle to set up the SVM model. Compared with the Nernst and Shepherd combined model, the SVM model can simulate the battery dynamics better with small amounts of experimental data. The maximum relative error is 3.61%

Ensemble support vector machine classification of dementia using structural MRI and mini-mental state examination.

Science.gov (United States)

Sørensen, Lauge; Nielsen, Mads

2018-05-15

The International Challenge for Automated Prediction of MCI from MRI data offered independent, standardized comparison of machine learning algorithms for multi-class classification of normal control (NC), mild cognitive impairment (MCI), converting MCI (cMCI), and Alzheimer's disease (AD) using brain imaging and general cognition. We proposed to use an ensemble of support vector machines (SVMs) that combined bagging without replacement and feature selection. SVM is the most commonly used algorithm in multivariate classification of dementia, and it was therefore valuable to evaluate the potential benefit of ensembling this type of classifier. The ensemble SVM, using either a linear or a radial basis function (RBF) kernel, achieved multi-class classification accuracies of 55.6% and 55.0% in the challenge test set (60 NC, 60 MCI, 60 cMCI, 60 AD), resulting in a third place in the challenge. Similar feature subset sizes were obtained for both kernels, and the most frequently selected MRI features were the volumes of the two hippocampal subregions left presubiculum and right subiculum. Post-challenge analysis revealed that enforcing a minimum number of selected features and increasing the number of ensemble classifiers improved classification accuracy up to 59.1%. The ensemble SVM outperformed single SVM classifications consistently in the challenge test set. Ensemble methods using bagging and feature selection can improve the performance of the commonly applied SVM classifier in dementia classification. This resulted in competitive classification accuracies in the International Challenge for Automated Prediction of MCI from MRI data. Copyright © 2018 Elsevier B.V. All rights reserved.

A comparative analysis of support vector machines and extreme learning machines.

Science.gov (United States)

Liu, Xueyi; Gao, Chuanhou; Li, Ping

2012-09-01

The theory of extreme learning machines (ELMs) has recently become increasingly popular. As a new learning algorithm for single-hidden-layer feed-forward neural networks, an ELM offers the advantages of low computational cost, good generalization ability, and ease of implementation. Hence the comparison and model selection between ELMs and other kinds of state-of-the-art machine learning approaches has become significant and has attracted many research efforts. This paper performs a comparative analysis of the basic ELMs and support vector machines (SVMs) from two viewpoints that are different from previous works: one is the Vapnik-Chervonenkis (VC) dimension, and the other is their performance under different training sample sizes. It is shown that the VC dimension of an ELM is equal to the number of hidden nodes of the ELM with probability one. Additionally, their generalization ability and computational complexity are exhibited with changing training sample size. ELMs have weaker generalization ability than SVMs for small sample but can generalize as well as SVMs for large sample. Remarkably, great superiority in computational speed especially for large-scale sample problems is found in ELMs. The results obtained can provide insight into the essential relationship between them, and can also serve as complementary knowledge for their past experimental and theoretical comparisons. Copyright © 2012 Elsevier Ltd. All rights reserved.

[Selection and construction of cell line stably expressing survivin gene in lower level through eukaryotic plasmid vector of shRNA].

Science.gov (United States)

Wang, Wen-Xia; Sun, Shan-Zhen; Song, Ying

2008-06-01

To construct a short hairpin RNA(shRNA) interference expression plasmid vector of survivin gene, transfect tongue squamous cell carcinoma line Tca8113 which expressed survivin gene in a high level, and choose the cells whose survivin gene were suppressed significantly. Two pairs of oligonucleotide sequences specific for survivin gene were designed and synthesized, and cloned into pSilencer-2.1U6-neo plasmid. The recombinant plasmids (named PS1 and PS2) were amplified in Ecoli. DH5alpha was identified by restriction digestion, PCR and sequencing. The vectors were transfected into Tca8113 cells with lipofectamine 2000. After selection with G418, the stable cell clones were attained. Survivn expression was assayed with real-time quantitative PCR and Western blotting. SAS8.0 software package was used for Student t test. Two vectors were constructed successfully and stable cell clones with PS1 or PS2 plasmid were obtained. As compared with those of control, survivin expression of transfected cell with PS1 or PS2 in mRNA level was significantly suppressed (P<0.05). In protein level, only those of transfected cell with PS2 was significantly suppressed (P<0.01). The shRNA interference expression plasmid vectors of survivin gene are successfully constructed, and Tca8113 cells which express survivin gene in a stable lower level are attained, which enable us to carry out further research on gene therapy of oral squamous cell carcinoma. Supported by National Natural Science Foundation of China (Grant No.30572056).

Using support vector machines with tract-based spatial statistics for automated classification of Tourette syndrome children

Science.gov (United States)

Wen, Hongwei; Liu, Yue; Wang, Jieqiong; Zhang, Jishui; Peng, Yun; He, Huiguang

2016-03-01

Tourette syndrome (TS) is a developmental neuropsychiatric disorder with the cardinal symptoms of motor and vocal tics which emerges in early childhood and fluctuates in severity in later years. To date, the neural basis of TS is not fully understood yet and TS has a long-term prognosis that is difficult to accurately estimate. Few studies have looked at the potential of using diffusion tensor imaging (DTI) in conjunction with machine learning algorithms in order to automate the classification of healthy children and TS children. Here we apply Tract-Based Spatial Statistics (TBSS) method to 44 TS children and 48 age and gender matched healthy children in order to extract the diffusion values from each voxel in the white matter (WM) skeleton, and a feature selection algorithm (ReliefF) was used to select the most salient voxels for subsequent classification with support vector machine (SVM). We use a nested cross validation to yield an unbiased assessment of the classification method and prevent overestimation. The accuracy (88.04%), sensitivity (88.64%) and specificity (87.50%) were achieved in our method as peak performance of the SVM classifier was achieved using the axial diffusion (AD) metric, demonstrating the potential of a joint TBSS and SVM pipeline for fast, objective classification of healthy and TS children. These results support that our methods may be useful for the early identification of subjects with TS, and hold promise for predicting prognosis and treatment outcome for individuals with TS.

A Novel Empirical Mode Decomposition With Support Vector Regression for Wind Speed Forecasting.

Science.gov (United States)

Ren, Ye; Suganthan, Ponnuthurai Nagaratnam; Srikanth, Narasimalu

2016-08-01

Wind energy is a clean and an abundant renewable energy source. Accurate wind speed forecasting is essential for power dispatch planning, unit commitment decision, maintenance scheduling, and regulation. However, wind is intermittent and wind speed is difficult to predict. This brief proposes a novel wind speed forecasting method by integrating empirical mode decomposition (EMD) and support vector regression (SVR) methods. The EMD is used to decompose the wind speed time series into several intrinsic mode functions (IMFs) and a residue. Subsequently, a vector combining one historical data from each IMF and the residue is generated to train the SVR. The proposed EMD-SVR model is evaluated with a wind speed data set. The proposed EMD-SVR model outperforms several recently reported methods with respect to accuracy or computational complexity.

Localization of thermal anomalies in electrical equipment using Infrared Thermography and support vector machine

Science.gov (United States)

Laib dit Leksir, Y.; Mansour, M.; Moussaoui, A.

2018-03-01

Analysis and processing of databases obtained from infrared thermal inspections made on electrical installations require the development of new tools to obtain more information to visual inspections. Consequently, methods based on the capture of thermal images show a great potential and are increasingly employed in this field. However, there is a need for the development of effective techniques to analyse these databases in order to extract significant information relating to the state of the infrastructures. This paper presents a technique explaining how this approach can be implemented and proposes a system that can help to detect faults in thermal images of electrical installations. The proposed method classifies and identifies the region of interest (ROI). The identification is conducted using support vector machine (SVM) algorithm. The aim here is to capture the faults that exist in electrical equipments during an inspection of some machines using A40 FLIR camera. After that, binarization techniques are employed to select the region of interest. Later the comparative analysis of the obtained misclassification errors using the proposed method with Fuzzy c means and Ostu, has also be addressed.

An MR Brain Images Classifier System via Particle Swarm Optimization and Kernel Support Vector Machine

Directory of Open Access Journals (Sweden)

Yudong Zhang

2013-01-01

Full Text Available Automated abnormal brain detection is extremely of importance for clinical diagnosis. Over last decades numerous methods had been presented. In this paper, we proposed a novel hybrid system to classify a given MR brain image as either normal or abnormal. The proposed method first employed digital wavelet transform to extract features then used principal component analysis (PCA to reduce the feature space. Afterwards, we constructed a kernel support vector machine (KSVM with RBF kernel, using particle swarm optimization (PSO to optimize the parameters C and σ. Fivefold cross-validation was utilized to avoid overfitting. In the experimental procedure, we created a 90 images dataset brain downloaded from Harvard Medical School website. The abnormal brain MR images consist of the following diseases: glioma, metastatic adenocarcinoma, metastatic bronchogenic carcinoma, meningioma, sarcoma, Alzheimer, Huntington, motor neuron disease, cerebral calcinosis, Pick’s disease, Alzheimer plus visual agnosia, multiple sclerosis, AIDS dementia, Lyme encephalopathy, herpes encephalitis, Creutzfeld-Jakob disease, and cerebral toxoplasmosis. The 5-folded cross-validation classification results showed that our method achieved 97.78% classification accuracy, higher than 86.22% by BP-NN and 91.33% by RBF-NN. For the parameter selection, we compared PSO with those of random selection method. The results showed that the PSO is more effective to build optimal KSVM.

Fault trend prediction of device based on support vector regression

International Nuclear Information System (INIS)

Song Meicun; Cai Qi

2011-01-01

The research condition of fault trend prediction and the basic theory of support vector regression (SVR) were introduced. SVR was applied to the fault trend prediction of roller bearing, and compared with other methods (BP neural network, gray model, and gray-AR model). The results show that BP network tends to overlearn and gets into local minimum so that the predictive result is unstable. It also shows that the predictive result of SVR is stabilization, and SVR is superior to BP neural network, gray model and gray-AR model in predictive precision. SVR is a kind of effective method of fault trend prediction. (authors)

Vectorization of phase space Monte Carlo code in FACOM vector processor VP-200

International Nuclear Information System (INIS)

Miura, Kenichi

1986-01-01

This paper describes the vectorization techniques for Monte Carlo codes in Fujitsu's Vector Processor System. The phase space Monte Carlo code FOWL is selected as a benchmark, and scalar and vector performances are compared. The vectorized kernel Monte Carlo routine which contains heavily nested IF tests runs up to 7.9 times faster in vector mode than in scalar mode. The overall performance improvement of the vectorized FOWL code over the original scalar code reaches 3.3. The results of this study strongly indicate that supercomputer can be a powerful tool for Monte Carlo simulations in high energy physics. (Auth.)

Normal mammogram detection based on local probability difference transforms and support vector machines

International Nuclear Information System (INIS)

Chiracharit, W.; Kumhom, P.; Chamnongthai, K.; Sun, Y.; Delp, E.J.; Babbs, C.F

2007-01-01

Automatic detection of normal mammograms, as a ''first look'' for breast cancer, is a new approach to computer-aided diagnosis. This approach may be limited, however, by two main causes. The first problem is the presence of poorly separable ''crossed-distributions'' in which the correct classification depends upon the value of each feature. The second problem is overlap of the feature distributions that are extracted from digitized mammograms of normal and abnormal patients. Here we introduce a new Support Vector Machine (SVM) based method utilizing with the proposed uncrossing mapping and Local Probability Difference (LPD). Crossed-distribution feature pairs are identified and mapped into a new features that can be separated by a zero-hyperplane of the new axis. The probability density functions of the features of normal and abnormal mammograms are then sampled and the local probability difference functions are estimated to enhance the features. From 1,000 ground-truth-known mammograms, 250 normal and 250 abnormal cases, including spiculated lesions, circumscribed masses or microcalcifications, are used for training a support vector machine. The classification results tested with another 250 normal and 250 abnormal sets show improved testing performances with 90% sensitivity and 89% specificity. (author)

Ameliorated Austenite Carbon Content Control in Austempered Ductile Irons by Support Vector Regression

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Chan-Yun Yang

2013-01-01

Full Text Available Austempered ductile iron has emerged as a notable material in several engineering fields, including marine applications. The initial austenite carbon content after austenization transform but before austempering process for generating bainite matrix proved critical in controlling the resulted microstructure and thus mechanical properties. In this paper, support vector regression is employed in order to establish a relationship between the initial carbon concentration in the austenite with austenization temperature and alloy contents, thereby exercising improved control in the mechanical properties of the austempered ductile irons. Particularly, the paper emphasizes a methodology tailored to deal with a limited amount of available data with intrinsically contracted and skewed distribution. The collected information from a variety of data sources presents another challenge of highly uncertain variance. The authors present a hybrid model consisting of a procedure of a histogram equalizer and a procedure of a support-vector-machine (SVM- based regression to gain a more robust relationship to respond to the challenges. The results show greatly improved accuracy of the proposed model in comparison to two former established methodologies. The sum squared error of the present model is less than one fifth of that of the two previous models.

A dynamic particle filter-support vector regression method for reliability prediction

International Nuclear Information System (INIS)

Wei, Zhao; Tao, Tao; ZhuoShu, Ding; Zio, Enrico

2013-01-01

Support vector regression (SVR) has been applied to time series prediction and some works have demonstrated the feasibility of its use to forecast system reliability. For accuracy of reliability forecasting, the selection of SVR's parameters is important. The existing research works on SVR's parameters selection divide the example dataset into training and test subsets, and tune the parameters on the training data. However, these fixed parameters can lead to poor prediction capabilities if the data of the test subset differ significantly from those of training. Differently, the novel method proposed in this paper uses particle filtering to estimate the SVR model parameters according to the whole measurement sequence up to the last observation instance. By treating the SVR training model as the observation equation of a particle filter, our method allows updating the SVR model parameters dynamically when a new observation comes. Because of the adaptability of the parameters to dynamic data pattern, the new PF–SVR method has superior prediction performance over that of standard SVR. Four application results show that PF–SVR is more robust than SVR to the decrease of the number of training data and the change of initial SVR parameter values. Also, even if there are trends in the test data different from those in the training data, the method can capture the changes, correct the SVR parameters and obtain good predictions. -- Highlights: •A dynamic PF–SVR method is proposed to predict the system reliability. •The method can adjust the SVR parameters according to the change of data. •The method is robust to the size of training data and initial parameter values. •Some cases based on both artificial and real data are studied. •PF–SVR shows superior prediction performance over standard SVR

Per-field crop classification in irrigated agricultural regions in middle Asia using random forest and support vector machine ensemble

Science.gov (United States)

Löw, Fabian; Schorcht, Gunther; Michel, Ulrich; Dech, Stefan; Conrad, Christopher

2012-10-01

Accurate crop identification and crop area estimation are important for studies on irrigated agricultural systems, yield and water demand modeling, and agrarian policy development. In this study a novel combination of Random Forest (RF) and Support Vector Machine (SVM) classifiers is presented that (i) enhances crop classification accuracy and (ii) provides spatial information on map uncertainty. The methodology was implemented over four distinct irrigated sites in Middle Asia using RapidEye time series data. The RF feature importance statistics was used as feature-selection strategy for the SVM to assess possible negative effects on classification accuracy caused by an oversized feature space. The results of the individual RF and SVM classifications were combined with rules based on posterior classification probability and estimates of classification probability entropy. SVM classification performance was increased by feature selection through RF. Further experimental results indicate that the hybrid classifier improves overall classification accuracy in comparison to the single classifiers as well as useŕs and produceŕs accuracy.

Relevance Vector Machine and Support Vector Machine Classifier Analysis of Scanning Laser Polarimetry Retinal Nerve Fiber Layer Measurements

Science.gov (United States)

Bowd, Christopher; Medeiros, Felipe A.; Zhang, Zuohua; Zangwill, Linda M.; Hao, Jiucang; Lee, Te-Won; Sejnowski, Terrence J.; Weinreb, Robert N.; Goldbaum, Michael H.

2010-01-01

Purpose To classify healthy and glaucomatous eyes using relevance vector machine (RVM) and support vector machine (SVM) learning classifiers trained on retinal nerve fiber layer (RNFL) thickness measurements obtained by scanning laser polarimetry (SLP). Methods Seventy-two eyes of 72 healthy control subjects (average age = 64.3 ± 8.8 years, visual field mean deviation =−0.71 ± 1.2 dB) and 92 eyes of 92 patients with glaucoma (average age = 66.9 ± 8.9 years, visual field mean deviation =−5.32 ± 4.0 dB) were imaged with SLP with variable corneal compensation (GDx VCC; Laser Diagnostic Technologies, San Diego, CA). RVM and SVM learning classifiers were trained and tested on SLP-determined RNFL thickness measurements from 14 standard parameters and 64 sectors (approximately 5.6° each) obtained in the circumpapillary area under the instrument-defined measurement ellipse (total 78 parameters). Tenfold cross-validation was used to train and test RVM and SVM classifiers on unique subsets of the full 164-eye data set and areas under the receiver operating characteristic (AUROC) curve for the classification of eyes in the test set were generated. AUROC curve results from RVM and SVM were compared to those for 14 SLP software-generated global and regional RNFL thickness parameters. Also reported was the AUROC curve for the GDx VCC software-generated nerve fiber indicator (NFI). Results The AUROC curves for RVM and SVM were 0.90 and 0.91, respectively, and increased to 0.93 and 0.94 when the training sets were optimized with sequential forward and backward selection (resulting in reduced dimensional data sets). AUROC curves for optimized RVM and SVM were significantly larger than those for all individual SLP parameters. The AUROC curve for the NFI was 0.87. Conclusions Results from RVM and SVM trained on SLP RNFL thickness measurements are similar and provide accurate classification of glaucomatous and healthy eyes. RVM may be preferable to SVM, because it provides a

Vector Network Coding Algorithms

OpenAIRE

Ebrahimi, Javad; Fragouli, Christina

2010-01-01

We develop new algebraic algorithms for scalar and vector network coding. In vector network coding, the source multicasts information by transmitting vectors of length L, while intermediate nodes process and combine their incoming packets by multiplying them with L x L coding matrices that play a similar role as coding c in scalar coding. Our algorithms for scalar network jointly optimize the employed field size while selecting the coding coefficients. Similarly, for vector coding, our algori...

Support vector machine used to diagnose the fault of rotor broken bars of induction motors

DEFF Research Database (Denmark)

Zhitong, Cao; Jiazhong, Fang; Hongpingn, Chen

2003-01-01

for the SVM. After a SVM is trained with learning sample vectors, so each kind of the rotor broken bar faults of induction motors can be classified. Finally the retest is demonstrated, which proves that the SVM really has preferable ability of classification. In this paper we tried applying the SVM......The data-based machine learning is an important aspect of modern intelligent technology, while statistical learning theory (SLT) is a new tool that studies the machine learning methods in the case of a small number of samples. As a common learning method, support vector machine (SVM) is derived...... from the SLT. Here we were done some analogical experiments of the rotor broken bar faults of induction motors used, analyzed the signals of the sample currents with Fourier transform, and constructed the spectrum characteristics from low frequency to high frequency used as learning sample vectors...

Faults Classification Of Power Electronic Circuits Based On A Support Vector Data Description Method

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Cui Jiang

2015-06-01

Full Text Available Power electronic circuits (PECs are prone to various failures, whose classification is of paramount importance. This paper presents a data-driven based fault diagnosis technique, which employs a support vector data description (SVDD method to perform fault classification of PECs. In the presented method, fault signals (e.g. currents, voltages, etc. are collected from accessible nodes of circuits, and then signal processing techniques (e.g. Fourier analysis, wavelet transform, etc. are adopted to extract feature samples, which are subsequently used to perform offline machine learning. Finally, the SVDD classifier is used to implement fault classification task. However, in some cases, the conventional SVDD cannot achieve good classification performance, because this classifier may generate some so-called refusal areas (RAs, and in our design these RAs are resolved with the one-against-one support vector machine (SVM classifier. The obtained experiment results from simulated and actual circuits demonstrate that the improved SVDD has a classification performance close to the conventional one-against-one SVM, and can be applied to fault classification of PECs in practice.

Gradient Evolution-based Support Vector Machine Algorithm for Classification

Science.gov (United States)

Zulvia, Ferani E.; Kuo, R. J.

2018-03-01

This paper proposes a classification algorithm based on a support vector machine (SVM) and gradient evolution (GE) algorithms. SVM algorithm has been widely used in classification. However, its result is significantly influenced by the parameters. Therefore, this paper aims to propose an improvement of SVM algorithm which can find the best SVMs’ parameters automatically. The proposed algorithm employs a GE algorithm to automatically determine the SVMs’ parameters. The GE algorithm takes a role as a global optimizer in finding the best parameter which will be used by SVM algorithm. The proposed GE-SVM algorithm is verified using some benchmark datasets and compared with other metaheuristic-based SVM algorithms. The experimental results show that the proposed GE-SVM algorithm obtains better results than other algorithms tested in this paper.

A hybrid approach to select features and classify diseases based on medical data

Science.gov (United States)

AbdelLatif, Hisham; Luo, Jiawei

2018-03-01

Feature selection is popular problem in the classification of diseases in clinical medicine. Here, we developing a hybrid methodology to classify diseases, based on three medical datasets, Arrhythmia, Breast cancer, and Hepatitis datasets. This methodology called k-means ANOVA Support Vector Machine (K-ANOVA-SVM) uses K-means cluster with ANOVA statistical to preprocessing data and selection the significant features, and Support Vector Machines in the classification process. To compare and evaluate the performance, we choice three classification algorithms, decision tree Naïve Bayes, Support Vector Machines and applied the medical datasets direct to these algorithms. Our methodology was a much better classification accuracy is given of 98% in Arrhythmia datasets, 92% in Breast cancer datasets and 88% in Hepatitis datasets, Compare to use the medical data directly with decision tree Naïve Bayes, and Support Vector Machines. Also, the ROC curve and precision with (K-ANOVA-SVM) Achieved best results than other algorithms

Particle swarm optimization based support vector machine for damage level prediction of non-reshaped berm breakwater

Digital Repository Service at National Institute of Oceanography (India)

Harish, N.; Mandal, S.; Rao, S.; Patil, S.G.

breakwater. Soft computing tools like Artificial Neural Network, Fuzzy Logic, Support Vector Machine (SVM), etc, are successfully used to solve complex problems. In the present study, SVM and hybrid of Particle Swarm Optimization (PSO) with SVM (PSO...

Laser-induced breakdown spectroscopy applied to the characterization of rock by support vector machine combined with principal component analysis

International Nuclear Information System (INIS)

Yang Hong-Xing; Fu Hong-Bo; Wang Hua-Dong; Jia Jun-Wei; Dong Feng-Zhong; Sigrist, Markus W

2016-01-01

Laser-induced breakdown spectroscopy (LIBS) is a versatile tool for both qualitative and quantitative analysis. In this paper, LIBS combined with principal component analysis (PCA) and support vector machine (SVM) is applied to rock analysis. Fourteen emission lines including Fe, Mg, Ca, Al, Si, and Ti are selected as analysis lines. A good accuracy (91.38% for the real rock) is achieved by using SVM to analyze the spectroscopic peak area data which are processed by PCA. It can not only reduce the noise and dimensionality which contributes to improving the efficiency of the program, but also solve the problem of linear inseparability by combining PCA and SVM. By this method, the ability of LIBS to classify rock is validated. (paper)

Time-frequency feature analysis and recognition of fission neutrons signal based on support vector machine

International Nuclear Information System (INIS)

Jin Jing; Wei Biao; Feng Peng; Tang Yuelin; Zhou Mi

2010-01-01

Based on the interdependent relationship between fission neutrons ( 252 Cf) and fission chain ( 235 U system), the paper presents the time-frequency feature analysis and recognition in fission neutron signal based on support vector machine (SVM) through the analysis on signal characteristics and the measuring principle of the 252 Cf fission neutron signal. The time-frequency characteristics and energy features of the fission neutron signal are extracted by using wavelet decomposition and de-noising wavelet packet decomposition, and then applied to training and classification by means of support vector machine based on statistical learning theory. The results show that, it is effective to obtain features of nuclear signal via wavelet decomposition and de-noising wavelet packet decomposition, and the latter can reflect the internal characteristics of the fission neutron system better. With the training accomplished, the SVM classifier achieves an accuracy rate above 70%, overcoming the lack of training samples, and verifying the effectiveness of the algorithm. (authors)

A Modified Method Combined with a Support Vector Machine and Bayesian Algorithms in Biological Information

Directory of Open Access Journals (Sweden)

Wen-Gang Zhou

2015-06-01

Full Text Available With the deep research of genomics and proteomics, the number of new protein sequences has expanded rapidly. With the obvious shortcomings of high cost and low efficiency of the traditional experimental method, the calculation method for protein localization prediction has attracted a lot of attention due to its convenience and low cost. In the machine learning techniques, neural network and support vector machine (SVM are often used as learning tools. Due to its complete theoretical framework, SVM has been widely applied. In this paper, we make an improvement on the existing machine learning algorithm of the support vector machine algorithm, and a new improved algorithm has been developed, combined with Bayesian algorithms. The proposed algorithm can improve calculation efficiency, and defects of the original algorithm are eliminated. According to the verification, the method has proved to be valid. At the same time, it can reduce calculation time and improve prediction efficiency.

Geodesic Flow Kernel Support Vector Machine for Hyperspectral Image Classification by Unsupervised Subspace Feature Transfer

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Alim Samat

2016-03-01

Full Text Available In order to deal with scenarios where the training data, used to deduce a model, and the validation data have different statistical distributions, we study the problem of transformed subspace feature transfer for domain adaptation (DA in the context of hyperspectral image classification via a geodesic Gaussian flow kernel based support vector machine (GFKSVM. To show the superior performance of the proposed approach, conventional support vector machines (SVMs and state-of-the-art DA algorithms, including information-theoretical learning of discriminative cluster for domain adaptation (ITLDC, joint distribution adaptation (JDA, and joint transfer matching (JTM, are also considered. Additionally, unsupervised linear and nonlinear subspace feature transfer techniques including principal component analysis (PCA, randomized nonlinear principal component analysis (rPCA, factor analysis (FA and non-negative matrix factorization (NNMF are investigated and compared. Experiments on two real hyperspectral images show the cross-image classification performances of the GFKSVM, confirming its effectiveness and suitability when applied to hyperspectral images.

A support vector machine approach to detect financial statement fraud in South Africa: A first look

CSIR Research Space (South Africa)

Moepya, SO

2014-04-01

Full Text Available Auditors face the difficult task of detecting companies that issue manipulated financial statements. In recent years, machine learning methods have provided a feasible solution to this task. This study develops support vector machine (SVM) models...

Breast cancer risk assessment and diagnosis model using fuzzy support vector machine based expert system

Science.gov (United States)

Dheeba, J.; Jaya, T.; Singh, N. Albert

2017-09-01

Classification of cancerous masses is a challenging task in many computerised detection systems. Cancerous masses are difficult to detect because these masses are obscured and subtle in mammograms. This paper investigates an intelligent classifier - fuzzy support vector machine (FSVM) applied to classify the tissues containing masses on mammograms for breast cancer diagnosis. The algorithm utilises texture features extracted using Laws texture energy measures and a FSVM to classify the suspicious masses. The new FSVM treats every feature as both normal and abnormal samples, but with different membership. By this way, the new FSVM have more generalisation ability to classify the masses in mammograms. The classifier analysed 219 clinical mammograms collected from breast cancer screening laboratory. The tests made on the real clinical mammograms shows that the proposed detection system has better discriminating power than the conventional support vector machine. With the best combination of FSVM and Laws texture features, the area under the Receiver operating characteristic curve reached .95, which corresponds to a sensitivity of 93.27% with a specificity of 87.17%. The results suggest that detecting masses using FSVM contribute to computer-aided detection of breast cancer and as a decision support system for radiologists.

Product demand forecasts using wavelet kernel support vector machine and particle swarm optimization in manufacture system

Science.gov (United States)

Wu, Qi

2010-03-01

Demand forecasts play a crucial role in supply chain management. The future demand for a certain product is the basis for the respective replenishment systems. Aiming at demand series with small samples, seasonal character, nonlinearity, randomicity and fuzziness, the existing support vector kernel does not approach the random curve of the sales time series in the space (quadratic continuous integral space). In this paper, we present a hybrid intelligent system combining the wavelet kernel support vector machine and particle swarm optimization for demand forecasting. The results of application in car sale series forecasting show that the forecasting approach based on the hybrid PSOWv-SVM model is effective and feasible, the comparison between the method proposed in this paper and other ones is also given, which proves that this method is, for the discussed example, better than hybrid PSOv-SVM and other traditional methods.

Distributed BOLD-response in association cortex vector state space predicts reaction time during selective attention.

Science.gov (United States)

Musso, Francesco; Konrad, Andreas; Vucurevic, Goran; Schäffner, Cornelius; Friedrich, Britta; Frech, Peter; Stoeter, Peter; Winterer, Georg

2006-02-15

Human cortical information processing is thought to be dominated by distributed activity in vector state space (Churchland, P.S., Sejnowski, T.J., 1992. The Computational Brain. MIT Press, Cambridge.). In principle, it should be possible to quantify distributed brain activation with independent component analysis (ICA) through vector-based decomposition, i.e., through a separation of a mixture of sources. Using event-related functional magnetic resonance imaging (fMRI) during a selective attention-requiring task (visual oddball), we explored how the number of independent components within activated cortical areas is related to reaction time. Prior to ICA, the activated cortical areas were determined on the basis of a General linear model (GLM) voxel-by-voxel analysis of the target stimuli (checkerboard reversal). Two activated cortical areas (temporoparietal cortex, medial prefrontal cortex) were further investigated as these cortical regions are known to be the sites of simultaneously active electromagnetic generators which give rise to the compound event-related potential P300 during oddball task conditions. We found that the number of independent components more strongly predicted reaction time than the overall level of "activation" (GLM BOLD-response) in the left temporoparietal area whereas in the medial prefrontal cortex both ICA and GLM predicted reaction time equally well. Comparable correlations were not seen when principle components were used instead of independent components. These results indicate that the number of independently activated components, i.e., a high level of cortical activation complexity in cortical vector state space, may index particularly efficient information processing during selective attention-requiring tasks. To our best knowledge, this is the first report describing a potential relationship between neuronal generators of cognitive processes, the associated electrophysiological evidence for the existence of distributed networks

Ranking Support Vector Machine with Kernel Approximation.

Science.gov (United States)

Chen, Kai; Li, Rongchun; Dou, Yong; Liang, Zhengfa; Lv, Qi

2017-01-01

Learning to rank algorithm has become important in recent years due to its successful application in information retrieval, recommender system, and computational biology, and so forth. Ranking support vector machine (RankSVM) is one of the state-of-art ranking models and has been favorably used. Nonlinear RankSVM (RankSVM with nonlinear kernels) can give higher accuracy than linear RankSVM (RankSVM with a linear kernel) for complex nonlinear ranking problem. However, the learning methods for nonlinear RankSVM are still time-consuming because of the calculation of kernel matrix. In this paper, we propose a fast ranking algorithm based on kernel approximation to avoid computing the kernel matrix. We explore two types of kernel approximation methods, namely, the Nyström method and random Fourier features. Primal truncated Newton method is used to optimize the pairwise L2-loss (squared Hinge-loss) objective function of the ranking model after the nonlinear kernel approximation. Experimental results demonstrate that our proposed method gets a much faster training speed than kernel RankSVM and achieves comparable or better performance over state-of-the-art ranking algorithms.

Ranking Support Vector Machine with Kernel Approximation

Directory of Open Access Journals (Sweden)

Kai Chen

2017-01-01

Full Text Available Learning to rank algorithm has become important in recent years due to its successful application in information retrieval, recommender system, and computational biology, and so forth. Ranking support vector machine (RankSVM is one of the state-of-art ranking models and has been favorably used. Nonlinear RankSVM (RankSVM with nonlinear kernels can give higher accuracy than linear RankSVM (RankSVM with a linear kernel for complex nonlinear ranking problem. However, the learning methods for nonlinear RankSVM are still time-consuming because of the calculation of kernel matrix. In this paper, we propose a fast ranking algorithm based on kernel approximation to avoid computing the kernel matrix. We explore two types of kernel approximation methods, namely, the Nyström method and random Fourier features. Primal truncated Newton method is used to optimize the pairwise L2-loss (squared Hinge-loss objective function of the ranking model after the nonlinear kernel approximation. Experimental results demonstrate that our proposed method gets a much faster training speed than kernel RankSVM and achieves comparable or better performance over state-of-the-art ranking algorithms.

DNBR Prediction Using a Support Vector Regression

International Nuclear Information System (INIS)

Yang, Heon Young; Na, Man Gyun

2008-01-01

PWRs (Pressurized Water Reactors) generally operate in the nucleate boiling state. However, the conversion of nucleate boiling into film boiling with conspicuously reduced heat transfer induces a boiling crisis that may cause the fuel clad melting in the long run. This type of boiling crisis is called Departure from Nucleate Boiling (DNB) phenomena. Because the prediction of minimum DNBR in a reactor core is very important to prevent the boiling crisis such as clad melting, a lot of research has been conducted to predict DNBR values. The object of this research is to predict minimum DNBR applying support vector regression (SVR) by using the measured signals of a reactor coolant system (RCS). The SVR has extensively and successfully been applied to nonlinear function approximation like the proposed problem for estimating DNBR values that will be a function of various input variables such as reactor power, reactor pressure, core mass flowrate, control rod positions and so on. The minimum DNBR in a reactor core is predicted using these various operating condition data as the inputs to the SVR. The minimum DBNR values predicted by the SVR confirm its correctness compared with COLSS values

PARAMETER SELECTION IN LEAST SQUARES-SUPPORT VECTOR MACHINES REGRESSION ORIENTED, USING GENERALIZED CROSS-VALIDATION

Directory of Open Access Journals (Sweden)

ANDRÉS M. ÁLVAREZ MEZA

2012-01-01

Full Text Available RESUMEN: En este trabajo, se propone una metodología para la selección automática de los parámetros libres de la técnica de regresión basada en mínimos cuadrados máquinas de vectores de soporte (LS-SVM, a partir de un análisis de validación cruzada generalizada multidimensional sobre el conjunto de ecuaciones lineales de LS-SVM. La técnica desarrollada no requiere de un conocimiento a priori por parte del usuario acerca de la influencia de los parámetros libres en los resultados. Se realizan experimentos sobre dos bases de datos artificiales y dos bases de datos reales. De acuerdo a los resultados obtenidos, se concluye que el algoritmo desarrollado calcula regresiones apropiadas con errores relativos competentes.

A fuzzy regression with support vector machine approach to the estimation of horizontal global solar radiation

International Nuclear Information System (INIS)

Baser, Furkan; Demirhan, Haydar

2017-01-01

Accurate estimation of the amount of horizontal global solar radiation for a particular field is an important input for decision processes in solar radiation investments. In this article, we focus on the estimation of yearly mean daily horizontal global solar radiation by using an approach that utilizes fuzzy regression functions with support vector machine (FRF-SVM). This approach is not seriously affected by outlier observations and does not suffer from the over-fitting problem. To demonstrate the utility of the FRF-SVM approach in the estimation of horizontal global solar radiation, we conduct an empirical study over a dataset collected in Turkey and applied the FRF-SVM approach with several kernel functions. Then, we compare the estimation accuracy of the FRF-SVM approach to an adaptive neuro-fuzzy system and a coplot supported-genetic programming approach. We observe that the FRF-SVM approach with a Gaussian kernel function is not affected by both outliers and over-fitting problem and gives the most accurate estimates of horizontal global solar radiation among the applied approaches. Consequently, the use of hybrid fuzzy functions and support vector machine approaches is found beneficial in long-term forecasting of horizontal global solar radiation over a region with complex climatic and terrestrial characteristics. - Highlights: • A fuzzy regression functions with support vector machines approach is proposed. • The approach is robust against outlier observations and over-fitting problem. • Estimation accuracy of the model is superior to several existent alternatives. • A new solar radiation estimation model is proposed for the region of Turkey. • The model is useful under complex terrestrial and climatic conditions.

Graduating the age-specific fertility pattern using Support Vector Machines

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Anastasia Kostaki

2009-06-01

Full Text Available A topic of interest in demographic literature is the graduation of the age-specific fertility pattern. A standard graduation technique extensively used by demographers is to fit parametric models that accurately reproduce it. Non-parametric statistical methodology might be alternatively used for this graduation purpose. Support Vector Machines (SVM is a non-parametric methodology that could be utilized for fertility graduation purposes. This paper evaluates the SVM techniques as tools for graduating fertility rates In that we apply these techniques to empirical age specific fertility rates from a variety of populations, time period, and cohorts. Additionally, for comparison reasons we also fit known parametric models to the same empirical data sets.

Estimation of the wind turbine yaw error by support vector machines

DEFF Research Database (Denmark)

Sheibat-Othman, Nida; Othman, Sami; Tayari, Raoaa

2015-01-01

Wind turbine yaw error information is of high importance in controlling wind turbine power and structural load. Normally used wind vanes are imprecise. In this work, the estimation of yaw error in wind turbines is studied using support vector machines for regression (SVR). As the methodology...... is data-based, simulated data from a high fidelity aero-elastic model is used for learning. The model simulates a variable speed horizontal-axis wind turbine composed of three blades and a full converter. Both partial load (blade angles fixed at 0 deg) and full load zones (active pitch actuators...

Lentiviral Vector Gene Transfer to Porcine Airways

Directory of Open Access Journals (Sweden)

Patrick L Sinn

2012-01-01

Full Text Available In this study, we investigated lentiviral vector development and transduction efficiencies in well-differentiated primary cultures of pig airway epithelia (PAE and wild-type pigs in vivo. We noted gene transfer efficiencies similar to that observed for human airway epithelia (HAE. Interestingly, feline immunodeficiency virus (FIV-based vectors transduced immortalized pig cells as well as pig primary cells more efficiently than HIV-1–based vectors. PAE express TRIM5α, a well-characterized species-specific lentiviral restriction factor. We contrasted the restrictive properties of porcine TRIM5α against FIV- and HIV-based vectors using gain and loss of function approaches. We observed no effect on HIV-1 or FIV conferred transgene expression in response to porcine TRIM5α overexpression or knockdown. To evaluate the ability of GP64-FIV to transduce porcine airways in vivo, we delivered vector expressing mCherry to the tracheal lobe of the lung and the ethmoid sinus of 4-week-old pigs. One week later, epithelial cells expressing mCherry were readily detected. Our findings indicate that pseudotyped FIV vectors confer similar tropisms in porcine epithelia as observed in human HAE and provide further support for the selection of GP64 as an appropriate envelope pseudotype for future preclinical gene therapy studies in the porcine model of cystic fibrosis (CF.

Support Vector Hazards Machine: A Counting Process Framework for Learning Risk Scores for Censored Outcomes.

Science.gov (United States)

Wang, Yuanjia; Chen, Tianle; Zeng, Donglin

2016-01-01

Learning risk scores to predict dichotomous or continuous outcomes using machine learning approaches has been studied extensively. However, how to learn risk scores for time-to-event outcomes subject to right censoring has received little attention until recently. Existing approaches rely on inverse probability weighting or rank-based regression, which may be inefficient. In this paper, we develop a new support vector hazards machine (SVHM) approach to predict censored outcomes. Our method is based on predicting the counting process associated with the time-to-event outcomes among subjects at risk via a series of support vector machines. Introducing counting processes to represent time-to-event data leads to a connection between support vector machines in supervised learning and hazards regression in standard survival analysis. To account for different at risk populations at observed event times, a time-varying offset is used in estimating risk scores. The resulting optimization is a convex quadratic programming problem that can easily incorporate non-linearity using kernel trick. We demonstrate an interesting link from the profiled empirical risk function of SVHM to the Cox partial likelihood. We then formally show that SVHM is optimal in discriminating covariate-specific hazard function from population average hazard function, and establish the consistency and learning rate of the predicted risk using the estimated risk scores. Simulation studies show improved prediction accuracy of the event times using SVHM compared to existing machine learning methods and standard conventional approaches. Finally, we analyze two real world biomedical study data where we use clinical markers and neuroimaging biomarkers to predict age-at-onset of a disease, and demonstrate superiority of SVHM in distinguishing high risk versus low risk subjects.

Vectorization in quantum chemistry

International Nuclear Information System (INIS)

Saunders, V.R.

1987-01-01

It is argued that the optimal vectorization algorithm for many steps (and sub-steps) in a typical ab initio calculation of molecular electronic structure is quite strongly dependent on the target vector machine. Details such as the availability (or lack) of a given vector construct in the hardware, vector startup times and asymptotic rates must all be considered when selecting the optimal algorithm. Illustrations are drawn from: gaussian integral evaluation, fock matrix construction, 4-index transformation of molecular integrals, direct-CI methods, the matrix multiply operation. A cross comparison of practical implementations on the CDC Cyber 205, the Cray-IS and Cray-XMP machines is presented. To achieve portability while remaining optimal on a wide range of machines it is necessary to code all available algorithms in a machine independent manner, and to select the appropriate algorithm using a procedure which is based on machine dependent parameters. Most such parameters concern the timing of certain vector loop kernals, which can usually be derived from a 'bench-marking' routine executed prior to the calculation proper

Automated valve fault detection based on acoustic emission parameters and support vector machine

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Salah M. Ali

2018-03-01

Full Text Available Reciprocating compressors are one of the most used types of compressors with wide applications in industry. The most common failure in reciprocating compressors is always related to the valves. Therefore, a reliable condition monitoring method is required to avoid the unplanned shutdown in this category of machines. Acoustic emission (AE technique is one of the effective recent methods in the field of valve condition monitoring. However, a major challenge is related to the analysis of AE signal which perhaps only depends on the experience and knowledge of technicians. This paper proposes automated fault detection method using support vector machine (SVM and AE parameters in an attempt to reduce human intervention in the process. Experiments were conducted on a single stage reciprocating air compressor by combining healthy and faulty valve conditions to acquire the AE signals. Valve functioning was identified through AE waveform analysis. SVM faults detection model was subsequently devised and validated based on training and testing samples respectively. The results demonstrated automatic valve fault detection model with accuracy exceeding 98%. It is believed that valve faults can be detected efficiently without human intervention by employing the proposed model for a single stage reciprocating compressor. Keywords: Condition monitoring, Faults detection, Signal analysis, Acoustic emission, Support vector machine

Genetic manipulation of endosymbionts to control vector and vector borne diseases

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Jay Prakash Gupta

Full Text Available Vector borne diseases (VBD are on the rise because of failure of the existing methods of control of vector and vector borne diseases and the climate change. A steep rise of VBDs are due to several factors like selection of insecticide resistant vector population, drug resistant parasite population and lack of effective vaccines against the VBDs. Environmental pollution, public health hazard and insecticide resistant vector population indicate that the insecticides are no longer a sustainable control method of vector and vector-borne diseases. Amongst the various alternative control strategies, symbiont based approach utilizing endosymbionts of arthropod vectors could be explored to control the vector and vector borne diseases. The endosymbiont population of arthropod vectors could be exploited in different ways viz., as a chemotherapeutic target, vaccine target for the control of vectors. Expression of molecules with antiparasitic activity by genetically transformed symbiotic bacteria of disease-transmitting arthropods may serve as a powerful approach to control certain arthropod-borne diseases. Genetic transformation of symbiotic bacteria of the arthropod vector to alter the vector’s ability to transmit pathogen is an alternative means of blocking the transmission of VBDs. In Indian scenario, where dengue, chikungunya, malaria and filariosis are prevalent, paratransgenic based approach can be used effectively. [Vet World 2012; 5(9.000: 571-576

Integrating principal component analysis and vector quantization with support vector regression for sulfur content prediction in HDS process

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Shokri Saeid

2015-01-01

Full Text Available An accurate prediction of sulfur content is very important for the proper operation and product quality control in hydrodesulfurization (HDS process. For this purpose, a reliable data- driven soft sensors utilizing Support Vector Regression (SVR was developed and the effects of integrating Vector Quantization (VQ with Principle Component Analysis (PCA were studied on the assessment of this soft sensor. First, in pre-processing step the PCA and VQ techniques were used to reduce dimensions of the original input datasets. Then, the compressed datasets were used as input variables for the SVR model. Experimental data from the HDS setup were employed to validate the proposed integrated model. The integration of VQ/PCA techniques with SVR model was able to increase the prediction accuracy of SVR. The obtained results show that integrated technique (VQ-SVR was better than (PCA-SVR in prediction accuracy. Also, VQ decreased the sum of the training and test time of SVR model in comparison with PCA. For further evaluation, the performance of VQ-SVR model was also compared to that of SVR. The obtained results indicated that VQ-SVR model delivered the best satisfactory predicting performance (AARE= 0.0668 and R2= 0.995 in comparison with investigated models.

Measurement of Charmless B to Vector-Vector decays at BaBar

International Nuclear Information System (INIS)

Olaiya, Emmanuel

2011-01-01

The authors present results of B → vector-vector (VV) and B → vector-axial vector (VA) decays B 0 → φX(X = φ,ρ + or ρ 0 ), B + → φK (*)+ , B 0 → K*K*, B 0 → ρ + b 1 - and B + → K* 0 α 1 + . The largest dataset used for these results is based on 465 x 10 6 Υ(4S) → B(bar B) decays, collected with the BABAR detector at the PEP-II B meson factory located at the Stanford Linear Accelerator Center (SLAC). Using larger datasets, the BABAR experiment has provided more precise B → VV measurements, further supporting the smaller than expected longitudinal polarization fraction of B → φK*. Additional B meson to vector-vector and vector-axial vector decays have also been studied with a view to shedding light on the polarization anomaly. Taking into account the available errors, we find no disagreement between theory and experiment for these additional decays.

Developing Probabilistic Operating Rules for Real-time Conjunctive Use of Surface and Groundwater Resources:Application of Support Vector Machines

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Mohammad Reza Bazargan-Lari

2011-01-01

Full Text Available Developing optimal operating policies for conjunctive use of surface and groundwater resources when different decision makers and stakeholders with conflicting objectives are involved is usually a challenging task. This problem would be more complex when objectives related to surface and groundwater quality are taken into account. In this paper, a new methodology is developed for real time conjunctive use of surface and groundwater resources. In the proposed methodology, a well-known multi-objective genetic algorithm, namely Non-dominated Sorting Genetic Algorithm II (NSGA-II is employed to develop a Pareto front among the objectives. The Young conflict resolution theory is also used for resolving the conflict of interests among decision makers. To develop the real time conjunctive use operating rules, the Probabilistic Support Vector Machines (PSVMs, which are capable of providing probability distribution functions of decision variables, are utilized. The proposed methodology is applied to Tehran Aquifer inTehran metropolitan area,Iran. Stakeholders in the study area have some conflicting interests including supplying water with acceptable quality, reducing pumping costs, improving groundwater quality and controlling the groundwater table fluctuations. In the proposed methodology, MODFLOW and MT3D groundwater quantity and quality simulation models are linked with NSGA-II optimization model to develop Pareto fronts among the objectives. The best solutions on the Pareto fronts are then selected using the Young conflict resolution theory. The selected solution (optimal monthly operating policies is used to train and verify a PSVM. The results show the significance of applying an integrated conflict resolution approach and the capability of support vector machines for the real time conjunctive use of surface and groundwater resources in the study area. It is also shown that the validation accuracy of the proposed operating rules is higher that 80

Freshwater Algal Bloom Prediction by Support Vector Machine in Macau Storage Reservoirs

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Zhengchao Xie

2012-01-01

Full Text Available Understanding and predicting dynamic change of algae population in freshwater reservoirs is particularly important, as algae-releasing cyanotoxins are carcinogens that would affect the health of public. However, the high complex nonlinearity of water variables and their interactions makes it difficult to model the growth of algae species. Recently, support vector machine (SVM was reported to have advantages of only requiring a small amount of samples, high degree of prediction accuracy, and long prediction period to solve the nonlinear problems. In this study, the SVM-based prediction and forecast models for phytoplankton abundance in Macau Storage Reservoir (MSR are proposed, in which the water parameters of pH, SiO2, alkalinity, bicarbonate (HCO3 -, dissolved oxygen (DO, total nitrogen (TN, UV254, turbidity, conductivity, nitrate, total nitrogen (TN, orthophosphate (PO4 3−, total phosphorus (TP, suspended solid (SS and total organic carbon (TOC selected from the correlation analysis of the 23 monthly water variables were included, with 8-year (2001–2008 data for training and the most recent 3 years (2009–2011 for testing. The modeling results showed that the prediction and forecast powers were estimated as approximately 0.76 and 0.86, respectively, showing that the SVM is an effective new way that can be used for monitoring algal bloom in drinking water storage reservoir.

Assessing the human cardiovascular response to moderate exercise: feature extraction by support vector regression

International Nuclear Information System (INIS)

Wang, Lu; Su, Steven W; Celler, Branko G; Chan, Gregory S H; Cheng, Teddy M; Savkin, Andrey V

2009-01-01

This study aims to quantitatively describe the steady-state relationships among percentage changes in key central cardiovascular variables (i.e. stroke volume, heart rate (HR), total peripheral resistance and cardiac output), measured using non-invasive means, in response to moderate exercise, and the oxygen uptake rate, using a new nonlinear regression approach—support vector regression. Ten untrained normal males exercised in an upright position on an electronically braked cycle ergometer with constant workloads ranging from 25 W to 125 W. Throughout the experiment, .VO 2 was determined breath by breath and the HR was monitored beat by beat. During the last minute of each exercise session, the cardiac output was measured beat by beat using a novel non-invasive ultrasound-based device and blood pressure was measured using a tonometric measurement device. Based on the analysis of experimental data, nonlinear steady-state relationships between key central cardiovascular variables and .VO 2 were qualitatively observed except for the HR which increased linearly as a function of increasing .VO 2 . Quantitative descriptions of these complex nonlinear behaviour were provided by nonparametric models which were obtained by using support vector regression

SVM Classifier - a comprehensive java interface for support vector machine classification of microarray data.

Science.gov (United States)

Pirooznia, Mehdi; Deng, Youping

2006-12-12

Graphical user interface (GUI) software promotes novelty by allowing users to extend the functionality. SVM Classifier is a cross-platform graphical application that handles very large datasets well. The purpose of this study is to create a GUI application that allows SVM users to perform SVM training, classification and prediction. The GUI provides user-friendly access to state-of-the-art SVM methods embodied in the LIBSVM implementation of Support Vector Machine. We implemented the java interface using standard swing libraries. We used a sample data from a breast cancer study for testing classification accuracy. We achieved 100% accuracy in classification among the BRCA1-BRCA2 samples with RBF kernel of SVM. We have developed a java GUI application that allows SVM users to perform SVM training, classification and prediction. We have demonstrated that support vector machines can accurately classify genes into functional categories based upon expression data from DNA microarray hybridization experiments. Among the different kernel functions that we examined, the SVM that uses a radial basis kernel function provides the best performance. The SVM Classifier is available at http://mfgn.usm.edu/ebl/svm/.

Image Jacobian Matrix Estimation Based on Online Support Vector Regression

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Shangqin Mao

2012-10-01

Full Text Available Research into robotics visual servoing is an important area in the field of robotics. It has proven difficult to achieve successful results for machine vision and robotics in unstructured environments without using any a priori camera or kinematic models. In uncalibrated visual servoing, image Jacobian matrix estimation methods can be divided into two groups: the online method and the offline method. The offline method is not appropriate for most natural environments. The online method is robust but rough. Moreover, if the images feature configuration changes, it needs to restart the approximating procedure. A novel approach based on an online support vector regression (OL-SVR algorithm is proposed which overcomes the drawbacks and combines the virtues just mentioned.

Gear fault diagnosis under variable conditions with intrinsic time-scale decomposition-singular value decomposition and support vector machine

Energy Technology Data Exchange (ETDEWEB)

Xing, Zhanqiang; Qu, Jianfeng; Chai, Yi; Tang, Qiu; Zhou, Yuming [Chongqing University, Chongqing (China)

2017-02-15

The gear vibration signal is nonlinear and non-stationary, gear fault diagnosis under variable conditions has always been unsatisfactory. To solve this problem, an intelligent fault diagnosis method based on Intrinsic time-scale decomposition (ITD)-Singular value decomposition (SVD) and Support vector machine (SVM) is proposed in this paper. The ITD method is adopted to decompose the vibration signal of gearbox into several Proper rotation components (PRCs). Subsequently, the singular value decomposition is proposed to obtain the singular value vectors of the proper rotation components and improve the robustness of feature extraction under variable conditions. Finally, the Support vector machine is applied to classify the fault type of gear. According to the experimental results, the performance of ITD-SVD exceeds those of the time-frequency analysis methods with EMD and WPT combined with SVD for feature extraction, and the classifier of SVM outperforms those for K-nearest neighbors (K-NN) and Back propagation (BP). Moreover, the proposed approach can accurately diagnose and identify different fault types of gear under variable conditions.

Support vector machine multiuser receiver for DS-CDMA signals in multipath channels.

Science.gov (United States)

Chen, S; Samingan, A K; Hanzo, L

2001-01-01

The problem of constructing an adaptive multiuser detector (MUD) is considered for direct sequence code division multiple access (DS-CDMA) signals transmitted through multipath channels. The emerging learning technique, called support vector machines (SVM), is proposed as a method of obtaining a nonlinear MUD from a relatively small training data block. Computer simulation is used to study this SVM MUD, and the results show that it can closely match the performance of the optimal Bayesian one-shot detector. Comparisons with an adaptive radial basis function (RBF) MUD trained by an unsupervised clustering algorithm are discussed.

Linear and support vector regressions based on geometrical correlation of data

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Kaijun Wang

2007-10-01

Full Text Available Linear regression (LR and support vector regression (SVR are widely used in data analysis. Geometrical correlation learning (GcLearn was proposed recently to improve the predictive ability of LR and SVR through mining and using correlations between data of a variable (inner correlation. This paper theoretically analyzes prediction performance of the GcLearn method and proves that GcLearn LR and SVR will have better prediction performance than traditional LR and SVR for prediction tasks when good inner correlations are obtained and predictions by traditional LR and SVR are far away from their neighbor training data under inner correlation. This gives the applicable condition of GcLearn method.

Environmental noise forecasting based on support vector machine

Science.gov (United States)

Fu, Yumei; Zan, Xinwu; Chen, Tianyi; Xiang, Shihan

2018-01-01

As an important pollution source, the noise pollution is always the researcher's focus. Especially in recent years, the noise pollution is seriously harmful to the human beings' environment, so the research about the noise pollution is a very hot spot. Some noise monitoring technologies and monitoring systems are applied in the environmental noise test, measurement and evaluation. But, the research about the environmental noise forecasting is weak. In this paper, a real-time environmental noise monitoring system is introduced briefly. This monitoring system is working in Mianyang City, Sichuan Province. It is monitoring and collecting the environmental noise about more than 20 enterprises in this district. Based on the large amount of noise data, the noise forecasting by the Support Vector Machine (SVM) is studied in detail. Compared with the time series forecasting model and the artificial neural network forecasting model, the SVM forecasting model has some advantages such as the smaller data size, the higher precision and stability. The noise forecasting results based on the SVM can provide the important and accuracy reference to the prevention and control of the environmental noise.

Lentiviral vectors and protocols for creation of stable hESC lines for fluorescent tracking and drug resistance selection of cardiomyocytes.

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Hiroko Kita-Matsuo

Full Text Available Developmental, physiological and tissue engineering studies critical to the development of successful myocardial regeneration therapies require new ways to effectively visualize and isolate large numbers of fluorescently labeled, functional cardiomyocytes.Here we describe methods for the clonal expansion of engineered hESCs and make available a suite of lentiviral vectors for that combine Blasticidin, Neomycin and Puromycin resistance based drug selection of pure populations of stem cells and cardiomyocytes with ubiquitous or lineage-specific promoters that direct expression of fluorescent proteins to visualize and track cardiomyocytes and their progenitors. The phospho-glycerate kinase (PGK promoter was used to ubiquitously direct expression of histone-2B fused eGFP and mCherry proteins to the nucleus to monitor DNA content and enable tracking of cell migration and lineage. Vectors with T/Brachyury and alpha-myosin heavy chain (alphaMHC promoters targeted fluorescent or drug-resistance proteins to early mesoderm and cardiomyocytes. The drug selection protocol yielded 96% pure cardiomyocytes that could be cultured for over 4 months. Puromycin-selected cardiomyocytes exhibited a gene expression profile similar to that of adult human cardiomyocytes and generated force and action potentials consistent with normal fetal cardiomyocytes, documenting these parameters in hESC-derived cardiomyocytes and validating that the selected cells retained normal differentiation and function.The protocols, vectors and gene expression data comprise tools to enhance cardiomyocyte production for large-scale applications.

A technique to identify some typical radio frequency interference using support vector machine

Science.gov (United States)

Wang, Yuanchao; Li, Mingtao; Li, Dawei; Zheng, Jianhua

2017-07-01

In this paper, we present a technique to automatically identify some typical radio frequency interference from pulsar surveys using support vector machine. The technique has been tested by candidates. In these experiments, to get features of SVM, we use principal component analysis for mosaic plots and its classification accuracy is 96.9%; while we use mathematical morphology operation for smog plots and horizontal stripes plots and its classification accuracy is 86%. The technique is simple, high accurate and useful.

Performance and optimization of support vector machines in high-energy physics classification problems

International Nuclear Information System (INIS)

Sahin, M.Ö.; Krücker, D.; Melzer-Pellmann, I.-A.

2016-01-01

In this paper we promote the use of Support Vector Machines (SVM) as a machine learning tool for searches in high-energy physics. As an example for a new-physics search we discuss the popular case of Supersymmetry at the Large Hadron Collider. We demonstrate that the SVM is a valuable tool and show that an automated discovery-significance based optimization of the SVM hyper-parameters is a highly efficient way to prepare an SVM for such applications.

Performance and optimization of support vector machines in high-energy physics classification problems

Energy Technology Data Exchange (ETDEWEB)

Sahin, Mehmet Oezguer; Kruecker, Dirk; Melzer-Pellmann, Isabell [DESY, Hamburg (Germany)

2016-07-01

In this talk, the use of Support Vector Machines (SVM) is promoted for new-physics searches in high-energy physics. We developed an interface, called SVM HEP Interface (SVM-HINT), for a popular SVM library, LibSVM, and introduced a statistical-significance based hyper-parameter optimization algorithm for the new-physics searches. As example case study, a search for Supersymmetry at the Large Hadron Collider is given to demonstrate the capabilities of SVM using SVM-HINT.

Performance and optimization of support vector machines in high-energy physics classification problems

Energy Technology Data Exchange (ETDEWEB)

Sahin, M.Ö., E-mail: ozgur.sahin@desy.de; Krücker, D., E-mail: dirk.kruecker@desy.de; Melzer-Pellmann, I.-A., E-mail: isabell.melzer@desy.de

2016-12-01

In this paper we promote the use of Support Vector Machines (SVM) as a machine learning tool for searches in high-energy physics. As an example for a new-physics search we discuss the popular case of Supersymmetry at the Large Hadron Collider. We demonstrate that the SVM is a valuable tool and show that an automated discovery-significance based optimization of the SVM hyper-parameters is a highly efficient way to prepare an SVM for such applications.

Soft sensor development and optimization of the commercial petrochemical plant integrating support vector regression and genetic algorithm

Directory of Open Access Journals (Sweden)

S.K. Lahiri

2009-09-01

Full Text Available Soft sensors have been widely used in the industrial process control to improve the quality of the product and assure safety in the production. The core of a soft sensor is to construct a soft sensing model. This paper introduces support vector regression (SVR, a new powerful machine learning methodbased on a statistical learning theory (SLT into soft sensor modeling and proposes a new soft sensing modeling method based on SVR. This paper presents an artificial intelligence based hybrid soft sensormodeling and optimization strategies, namely support vector regression – genetic algorithm (SVR-GA for modeling and optimization of mono ethylene glycol (MEG quality variable in a commercial glycol plant. In the SVR-GA approach, a support vector regression model is constructed for correlating the process data comprising values of operating and performance variables. Next, model inputs describing the process operating variables are optimized using genetic algorithm with a view to maximize the process performance. The SVR-GA is a new strategy for soft sensor modeling and optimization. The major advantage of the strategies is that modeling and optimization can be conducted exclusively from the historic process data wherein the detailed knowledge of process phenomenology (reaction mechanism, kinetics etc. is not required. Using SVR-GA strategy, a number of sets of optimized operating conditions were found. The optimized solutions, when verified in an actual plant, resulted in a significant improvement in the quality.

New model for prediction binary mixture of antihistamine decongestant using artificial neural networks and least squares support vector machine by spectrophotometry method

Science.gov (United States)

Mofavvaz, Shirin; Sohrabi, Mahmoud Reza; Nezamzadeh-Ejhieh, Alireza

2017-07-01

In the present study, artificial neural networks (ANNs) and least squares support vector machines (LS-SVM) as intelligent methods based on absorption spectra in the range of 230-300 nm have been used for determination of antihistamine decongestant contents. In the first step, one type of network (feed-forward back-propagation) from the artificial neural network with two different training algorithms, Levenberg-Marquardt (LM) and gradient descent with momentum and adaptive learning rate back-propagation (GDX) algorithm, were employed and their performance was evaluated. The performance of the LM algorithm was better than the GDX algorithm. In the second one, the radial basis network was utilized and results compared with the previous network. In the last one, the other intelligent method named least squares support vector machine was proposed to construct the antihistamine decongestant prediction model and the results were compared with two of the aforementioned networks. The values of the statistical parameters mean square error (MSE), Regression coefficient (R2), correlation coefficient (r) and also mean recovery (%), relative standard deviation (RSD) used for selecting the best model between these methods. Moreover, the proposed methods were compared to the high- performance liquid chromatography (HPLC) as a reference method. One way analysis of variance (ANOVA) test at the 95% confidence level applied to the comparison results of suggested and reference methods that there were no significant differences between them.

Noise model based ν-support vector regression with its application to short-term wind speed forecasting.

Science.gov (United States)

Hu, Qinghua; Zhang, Shiguang; Xie, Zongxia; Mi, Jusheng; Wan, Jie

2014-09-01

Support vector regression (SVR) techniques are aimed at discovering a linear or nonlinear structure hidden in sample data. Most existing regression techniques take the assumption that the error distribution is Gaussian. However, it was observed that the noise in some real-world applications, such as wind power forecasting and direction of the arrival estimation problem, does not satisfy Gaussian distribution, but a beta distribution, Laplacian distribution, or other models. In these cases the current regression techniques are not optimal. According to the Bayesian approach, we derive a general loss function and develop a technique of the uniform model of ν-support vector regression for the general noise model (N-SVR). The Augmented Lagrange Multiplier method is introduced to solve N-SVR. Numerical experiments on artificial data sets, UCI data and short-term wind speed prediction are conducted. The results show the effectiveness of the proposed technique. Copyright © 2014 Elsevier Ltd. All rights reserved.

Support vector regression model for the estimation of γ-ray buildup factors for multi-layer shields

International Nuclear Information System (INIS)

Trontl, Kresimir; Smuc, Tomislav; Pevec, Dubravko

2007-01-01

The accuracy of the point-kernel method, which is a widely used practical tool for γ-ray shielding calculations, strongly depends on the quality and accuracy of buildup factors used in the calculations. Although, buildup factors for single-layer shields comprised of a single material are well known, calculation of buildup factors for stratified shields, each layer comprised of different material or a combination of materials, represent a complex physical problem. Recently, a new compact mathematical model for multi-layer shield buildup factor representation has been suggested for embedding into point-kernel codes thus replacing traditionally generated complex mathematical expressions. The new regression model is based on support vector machines learning technique, which is an extension of Statistical Learning Theory. The paper gives complete description of the novel methodology with results pertaining to realistic engineering multi-layer shielding geometries. The results based on support vector regression machine learning confirm that this approach provides a framework for general, accurate and computationally acceptable multi-layer buildup factor model

Predicting metabolic syndrome using decision tree and support vector machine methods

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Farzaneh Karimi-Alavijeh

2016-06-01

Full Text Available BACKGROUND: Metabolic syndrome which underlies the increased prevalence of cardiovascular disease and Type 2 diabetes is considered as a group of metabolic abnormalities including central obesity, hypertriglyceridemia, glucose intolerance, hypertension, and dyslipidemia. Recently, artificial intelligence based health-care systems are highly regarded because of its success in diagnosis, prediction, and choice of treatment. This study employs machine learning technics for predict the metabolic syndrome. METHODS: This study aims to employ decision tree and support vector machine (SVM to predict the 7-year incidence of metabolic syndrome. This research is a practical one in which data from 2107 participants of Isfahan Cohort Study has been utilized. The subjects without metabolic syndrome according to the ATPIII criteria were selected. The features that have been used in this data set include: gender, age, weight, body mass index, waist circumference, waist-to-hip ratio, hip circumference, physical activity, smoking, hypertension, antihypertensive medication use, systolic blood pressure (BP, diastolic BP, fasting blood sugar, 2-hour blood glucose, triglycerides (TGs, total cholesterol, low-density lipoprotein, high density lipoprotein-cholesterol, mean corpuscular volume, and mean corpuscular hemoglobin. Metabolic syndrome was diagnosed based on ATPIII criteria and two methods of decision tree and SVM were selected to predict the metabolic syndrome. The criteria of sensitivity, specificity and accuracy were used for validation. RESULTS: SVM and decision tree methods were examined according to the criteria of sensitivity, specificity and accuracy. Sensitivity, specificity and accuracy were 0.774 (0.758, 0.74 (0.72 and 0.757 (0.739 in SVM (decision tree method. CONCLUSION: The results show that SVM method sensitivity, specificity and accuracy is more efficient than decision tree. The results of decision tree method show that the TG is the most

Predicting metabolic syndrome using decision tree and support vector machine methods.

Science.gov (United States)

Karimi-Alavijeh, Farzaneh; Jalili, Saeed; Sadeghi, Masoumeh

2016-05-01

Metabolic syndrome which underlies the increased prevalence of cardiovascular disease and Type 2 diabetes is considered as a group of metabolic abnormalities including central obesity, hypertriglyceridemia, glucose intolerance, hypertension, and dyslipidemia. Recently, artificial intelligence based health-care systems are highly regarded because of its success in diagnosis, prediction, and choice of treatment. This study employs machine learning technics for predict the metabolic syndrome. This study aims to employ decision tree and support vector machine (SVM) to predict the 7-year incidence of metabolic syndrome. This research is a practical one in which data from 2107 participants of Isfahan Cohort Study has been utilized. The subjects without metabolic syndrome according to the ATPIII criteria were selected. The features that have been used in this data set include: gender, age, weight, body mass index, waist circumference, waist-to-hip ratio, hip circumference, physical activity, smoking, hypertension, antihypertensive medication use, systolic blood pressure (BP), diastolic BP, fasting blood sugar, 2-hour blood glucose, triglycerides (TGs), total cholesterol, low-density lipoprotein, high density lipoprotein-cholesterol, mean corpuscular volume, and mean corpuscular hemoglobin. Metabolic syndrome was diagnosed based on ATPIII criteria and two methods of decision tree and SVM were selected to predict the metabolic syndrome. The criteria of sensitivity, specificity and accuracy were used for validation. SVM and decision tree methods were examined according to the criteria of sensitivity, specificity and accuracy. Sensitivity, specificity and accuracy were 0.774 (0.758), 0.74 (0.72) and 0.757 (0.739) in SVM (decision tree) method. The results show that SVM method sensitivity, specificity and accuracy is more efficient than decision tree. The results of decision tree method show that the TG is the most important feature in predicting metabolic syndrome. According

hERG classification model based on a combination of support vector machine method and GRIND descriptors

DEFF Research Database (Denmark)

Li, Qiyuan; Jorgensen, Flemming Steen; Oprea, Tudor

2008-01-01

and diverse library of 495 compounds. The models combine pharmacophore-based GRIND descriptors with a support vector machine (SVM) classifier in order to discriminate between hERG blockers and nonblockers. Our models were applied at different thresholds from 1 to 40 mu m and achieved an overall accuracy up...

BEHAVIOR BASED CREDIT CARD FRAUD DETECTION USING SUPPORT VECTOR MACHINES

Directory of Open Access Journals (Sweden)

V. Dheepa

2012-07-01

Full Text Available Along with the great increase of internet and e-commerce, the use of credit card is an unavoidable one. Due to the increase of credit card usage, the frauds associated with this have also increased. There are a lot of approaches used to detect the frauds. In this paper, behavior based classification approach using Support Vector Machines are employed and efficient feature extraction method also adopted. If any discrepancies occur in the behaviors transaction pattern then it is predicted as suspicious and taken for further consideration to find the frauds. Generally credit card fraud detection problem suffers from a large amount of data, which is rectified by the proposed method. Achieving finest accuracy, high fraud catching rate and low false alarms are the main tasks of this approach.

Modeling a ground-coupled heat pump system by a support vector machine

Energy Technology Data Exchange (ETDEWEB)

Esen, Hikmet; Esen, Mehmet [Department of Mechanical Education, Faculty of Technical Education, Firat University, 23119 Elazig (Turkey); Inalli, Mustafa [Department of Mechanical Engineering, Faculty of Engineering, Firat University, 23279 Elazig (Turkey); Sengur, Abdulkadir [Department of Electronic and Computer Science, Faculty of Technical Education, Firat University, 23119 Elazig (Turkey)

2008-08-15

This paper reports on a modeling study of ground coupled heat pump (GCHP) system performance (COP) by using a support vector machine (SVM) method. A GCHP system is a multi-variable system that is hard to model by conventional methods. As regards the SVM, it has a superior capability for generalization, and this capability is independent of the dimensionality of the input data. In this study, a SVM based method was intended to adopt GCHP system for efficient modeling. The Lin-kernel SVM method was quite efficient in modeling purposes and did not require a pre-knowledge about the system. The performance of the proposed methodology was evaluated by using several statistical validation parameters. It is found that the root-mean squared (RMS) value is 0.002722, the coefficient of multiple determinations (R{sup 2}) value is 0.999999, coefficient of variation (cov) value is 0.077295, and mean error function (MEF) value is 0.507437 for the proposed Lin-kernel SVM method. The optimum parameters of the SVM method were determined by using a greedy search algorithm. This search algorithm was effective for obtaining the optimum parameters. The simulation results show that the SVM is a good method for prediction of the COP of the GCHP system. The computation of SVM model is faster compared with other machine learning techniques (artificial neural networks (ANN) and adaptive neuro-fuzzy inference system (ANFIS)); because there are fewer free parameters and only support vectors (only a fraction of all data) are used in the generalization process. (author)

Automatic Task Classification via Support Vector Machine and Crowdsourcing

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Hyungsik Shin

2018-01-01

Full Text Available Automatic task classification is a core part of personal assistant systems that are widely used in mobile devices such as smartphones and tablets. Even though many industry leaders are providing their own personal assistant services, their proprietary internals and implementations are not well known to the public. In this work, we show through real implementation and evaluation that automatic task classification can be implemented for mobile devices by using the support vector machine algorithm and crowdsourcing. To train our task classifier, we collected our training data set via crowdsourcing using the Amazon Mechanical Turk platform. Our classifier can classify a short English sentence into one of the thirty-two predefined tasks that are frequently requested while using personal mobile devices. Evaluation results show high prediction accuracy of our classifier ranging from 82% to 99%. By using large amount of crowdsourced data, we also illustrate the relationship between training data size and the prediction accuracy of our task classifier.

Automatic inspection of textured surfaces by support vector machines

Science.gov (United States)

Jahanbin, Sina; Bovik, Alan C.; Pérez, Eduardo; Nair, Dinesh

2009-08-01

Automatic inspection of manufactured products with natural looking textures is a challenging task. Products such as tiles, textile, leather, and lumber project image textures that cannot be modeled as periodic or otherwise regular; therefore, a stochastic modeling of local intensity distribution is required. An inspection system to replace human inspectors should be flexible in detecting flaws such as scratches, cracks, and stains occurring in various shapes and sizes that have never been seen before. A computer vision algorithm is proposed in this paper that extracts local statistical features from grey-level texture images decomposed with wavelet frames into subbands of various orientations and scales. The local features extracted are second order statistics derived from grey-level co-occurrence matrices. Subsequently, a support vector machine (SVM) classifier is trained to learn a general description of normal texture from defect-free samples. This algorithm is implemented in LabVIEW and is capable of processing natural texture images in real-time.

Probability Distribution and Deviation Information Fusion Driven Support Vector Regression Model and Its Application

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Changhao Fan

2017-01-01

Full Text Available In modeling, only information from the deviation between the output of the support vector regression (SVR model and the training sample is considered, whereas the other prior information of the training sample, such as probability distribution information, is ignored. Probabilistic distribution information describes the overall distribution of sample data in a training sample that contains different degrees of noise and potential outliers, as well as helping develop a high-accuracy model. To mine and use the probability distribution information of a training sample, a new support vector regression model that incorporates probability distribution information weight SVR (PDISVR is proposed. In the PDISVR model, the probability distribution of each sample is considered as the weight and is then introduced into the error coefficient and slack variables of SVR. Thus, the deviation and probability distribution information of the training sample are both used in the PDISVR model to eliminate the influence of noise and outliers in the training sample and to improve predictive performance. Furthermore, examples with different degrees of noise were employed to demonstrate the performance of PDISVR, which was then compared with those of three SVR-based methods. The results showed that PDISVR performs better than the three other methods.

Optimum Tower Crane Selection and Supporting Design Management

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Hyo Won Sohn

2014-08-01

Full Text Available To optimize tower crane selection and supporting design, lifting requirements (as well as stability should be examined, followed by a review of economic feasibility. However, construction engineers establish plans based on data provided by equipment suppliers since there are no tools with which to thoroughly examine a support design's suitability for various crane types, and such plans lack the necessary supporting data. In such cases it is impossible to optimize a tower crane selection to satisfy lifting requirements in terms of cost, and to perform lateral support and foundation design. Thus, this study is intended to develop an optimum tower crane selection and supporting design management method based on stability. All cases that are capable of generating an optimization of approximately 3,000 ˜ 15,000 times are calculated to identify the candidate cranes with minimized cost, which are examined. The optimization method developed in the study is expected to support engineers in determining the optimum lifting equipment management.

A SUPPORT VECTOR MACHINE APPROACH FOR DEVELOPING TELEMEDICINE SOLUTIONS: MEDICAL DIAGNOSIS

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Mihaela GHEORGHE

2015-06-01

Full Text Available Support vector machine represents an important tool for artificial neural networks techniques including classification and prediction. It offers a solution for a wide range of different issues in which cases the traditional optimization algorithms and methods cannot be applied directly due to different constraints, including memory restrictions, hidden relationships between variables, very high volume of computations that needs to be handled. One of these issues relates to medical diagnosis, a subset of the medical field. In this paper, the SVM learning algorithm is tested on a diabetes dataset and the results obtained for training with different kernel functions are presented and analyzed in order to determine a good approach from a telemedicine perspective.

Diagnostic Method of Diabetes Based on Support Vector Machine and Tongue Images

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Jianfeng Zhang

2017-01-01

Full Text Available Objective. The purpose of this research is to develop a diagnostic method of diabetes based on standardized tongue image using support vector machine (SVM. Methods. Tongue images of 296 diabetic subjects and 531 nondiabetic subjects were collected by the TDA-1 digital tongue instrument. Tongue body and tongue coating were separated by the division-merging method and chrominance-threshold method. With extracted color and texture features of the tongue image as input variables, the diagnostic model of diabetes with SVM was trained. After optimizing the combination of SVM kernel parameters and input variables, the influences of the combinations on the model were analyzed. Results. After normalizing parameters of tongue images, the accuracy rate of diabetes predication was increased from 77.83% to 78.77%. The accuracy rate and area under curve (AUC were not reduced after reducing the dimensions of tongue features with principal component analysis (PCA, while substantially saving the training time. During the training for selecting SVM parameters by genetic algorithm (GA, the accuracy rate of cross-validation was grown from 72% or so to 83.06%. Finally, we compare with several state-of-the-art algorithms, and experimental results show that our algorithm has the best predictive accuracy. Conclusions. The diagnostic method of diabetes on the basis of tongue images in Traditional Chinese Medicine (TCM is of great value, indicating the feasibility of digitalized tongue diagnosis.

Optimizing Support Vector Machine Parameters with Genetic Algorithm for Credit Risk Assessment

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Manurung, Jonson; Mawengkang, Herman; Zamzami, Elviawaty

2017-12-01

Support vector machine (SVM) is a popular classification method known to have strong generalization capabilities. SVM can solve the problem of classification and linear regression or nonlinear kernel which can be a learning algorithm for the ability of classification and regression. However, SVM also has a weakness that is difficult to determine the optimal parameter value. SVM calculates the best linear separator on the input feature space according to the training data. To classify data which are non-linearly separable, SVM uses kernel tricks to transform the data into a linearly separable data on a higher dimension feature space. The kernel trick using various kinds of kernel functions, such as : linear kernel, polynomial, radial base function (RBF) and sigmoid. Each function has parameters which affect the accuracy of SVM classification. To solve the problem genetic algorithms are proposed to be applied as the optimal parameter value search algorithm thus increasing the best classification accuracy on SVM. Data taken from UCI repository of machine learning database: Australian Credit Approval. The results show that the combination of SVM and genetic algorithms is effective in improving classification accuracy. Genetic algorithms has been shown to be effective in systematically finding optimal kernel parameters for SVM, instead of randomly selected kernel parameters. The best accuracy for data has been upgraded from kernel Linear: 85.12%, polynomial: 81.76%, RBF: 77.22% Sigmoid: 78.70%. However, for bigger data sizes, this method is not practical because it takes a lot of time.

Prediction of Agriculture Drought Using Support Vector Regression Incorporating with Climatology Indices

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Tian, Y.; Xu, Y. P.

2017-12-01

In this paper, the Support Vector Regression (SVR) model incorporating climate indices and drought indices are developed to predict agriculture drought in Xiangjiang River basin, Central China. The agriculture droughts are presented with the Precipitation-Evapotranspiration Index (SPEI). According to the analysis of the relationship between SPEI with different time scales and soil moisture, it is found that SPEI of six months time scales (SPEI-6) could reflect the soil moisture better than that of three and one month time scale from the drought features including drought duration, severity and peak. Climate forcing like El Niño Southern Oscillation and western Pacific subtropical high (WPSH) are represented by climate indices such as MEI and series indices of WPSH. Ridge Point of WPSH is found to be the key factor that influences the agriculture drought mainly through the control of temperature. Based on the climate indices analysis, the predictions of SPEI-6 are conducted using the SVR model. The results show that the SVR model incorperating climate indices, especially ridge point of WPSH, could improve the prediction accuracy compared to that using drought index only. The improvement was more significant for the prediction of one month lead time than that of three months lead time. However, it needs to be cautious in selection of the input parameters, since adding more useless information could have a counter effect in attaining a better prediction.

Auto type-selection of constant supporting in nuclear power stations

International Nuclear Information System (INIS)

Liu Hu; Wang Fujun; Liu Wei; Li Zhaoqing

2013-01-01

To solve the type-selection of constant supporting in nuclear power stations, combining the characteristics of constant supporting which can adjust in the certain scope and the rules of load-displacement, the requirements and process for the type-selection of constant supporting is proposed, and the process of type-selection is optimized by Visual Basic. After inputting of the known parameters, the process can automatically select the most economical and reasonable constant supporting by array and function. (authors)

Individualized prediction of illness course at the first psychotic episode: a support vector machine MRI study.

LENUS (Irish Health Repository)

Mourao-Miranda, J

2012-05-01

To date, magnetic resonance imaging (MRI) has made little impact on the diagnosis and monitoring of psychoses in individual patients. In this study, we used a support vector machine (SVM) whole-brain classification approach to predict future illness course at the individual level from MRI data obtained at the first psychotic episode.

Successive overrelaxation for laplacian support vector machine.

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Qi, Zhiquan; Tian, Yingjie; Shi, Yong

2015-04-01

Semisupervised learning (SSL) problem, which makes use of both a large amount of cheap unlabeled data and a few unlabeled data for training, in the last few years, has attracted amounts of attention in machine learning and data mining. Exploiting the manifold regularization (MR), Belkin et al. proposed a new semisupervised classification algorithm: Laplacian support vector machines (LapSVMs), and have shown the state-of-the-art performance in SSL field. To further improve the LapSVMs, we proposed a fast Laplacian SVM (FLapSVM) solver for classification. Compared with the standard LapSVM, our method has several improved advantages as follows: 1) FLapSVM does not need to deal with the extra matrix and burden the computations related to the variable switching, which make it more suitable for large scale problems; 2) FLapSVM’s dual problem has the same elegant formulation as that of standard SVMs. This means that the kernel trick can be applied directly into the optimization model; and 3) FLapSVM can be effectively solved by successive overrelaxation technology, which converges linearly to a solution and can process very large data sets that need not reside in memory. In practice, combining the strategies of random scheduling of subproblem and two stopping conditions, the computing speed of FLapSVM is rigidly quicker to that of LapSVM and it is a valid alternative to PLapSVM.

SVM Classifier – a comprehensive java interface for support vector machine classification of microarray data

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Pirooznia, Mehdi; Deng, Youping

2006-01-01

Motivation Graphical user interface (GUI) software promotes novelty by allowing users to extend the functionality. SVM Classifier is a cross-platform graphical application that handles very large datasets well. The purpose of this study is to create a GUI application that allows SVM users to perform SVM training, classification and prediction. Results The GUI provides user-friendly access to state-of-the-art SVM methods embodied in the LIBSVM implementation of Support Vector Machine. We implemented the java interface using standard swing libraries. We used a sample data from a breast cancer study for testing classification accuracy. We achieved 100% accuracy in classification among the BRCA1–BRCA2 samples with RBF kernel of SVM. Conclusion We have developed a java GUI application that allows SVM users to perform SVM training, classification and prediction. We have demonstrated that support vector machines can accurately classify genes into functional categories based upon expression data from DNA microarray hybridization experiments. Among the different kernel functions that we examined, the SVM that uses a radial basis kernel function provides the best performance. The SVM Classifier is available at . PMID:17217518

Nonlinear structural damage detection using support vector machines

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Xiao, Li; Qu, Wenzhong

2012-04-01

An actual structure including connections and interfaces may exist nonlinear. Because of many complicated problems about nonlinear structural health monitoring (SHM), relatively little progress have been made in this aspect. Statistical pattern recognition techniques have been demonstrated to be competitive with other methods when applied to real engineering datasets. When a structure existing 'breathing' cracks that open and close under operational loading may cause a linear structural system to respond to its operational and environmental loads in a nonlinear manner nonlinear. In this paper, a vibration-based structural health monitoring when the structure exists cracks is investigated with autoregressive support vector machine (AR-SVM). Vibration experiments are carried out with a model frame. Time-series data in different cases such as: initial linear structure; linear structure with mass changed; nonlinear structure; nonlinear structure with mass changed are acquired.AR model of acceleration time-series is established, and different kernel function types and corresponding parameters are chosen and compared, which can more accurate, more effectively locate the damage. Different cases damaged states and different damage positions have been recognized successfully. AR-SVM method for the insufficient training samples is proved to be practical and efficient on structure nonlinear damage detection.

Intelligent Quality Prediction Using Weighted Least Square Support Vector Regression

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Yu, Yaojun

A novel quality prediction method with mobile time window is proposed for small-batch producing process based on weighted least squares support vector regression (LS-SVR). The design steps and learning algorithm are also addressed. In the method, weighted LS-SVR is taken as the intelligent kernel, with which the small-batch learning is solved well and the nearer sample is set a larger weight, while the farther is set the smaller weight in the history data. A typical machining process of cutting bearing outer race is carried out and the real measured data are used to contrast experiment. The experimental results demonstrate that the prediction accuracy of the weighted LS-SVR based model is only 20%-30% that of the standard LS-SVR based one in the same condition. It provides a better candidate for quality prediction of small-batch producing process.

A Support Vector Machine-Based Gender Identification Using Speech Signal

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Lee, Kye-Hwan; Kang, Sang-Ick; Kim, Deok-Hwan; Chang, Joon-Hyuk

We propose an effective voice-based gender identification method using a support vector machine (SVM). The SVM is a binary classification algorithm that classifies two groups by finding the voluntary nonlinear boundary in a feature space and is known to yield high classification performance. In the present work, we compare the identification performance of the SVM with that of a Gaussian mixture model (GMM)-based method using the mel frequency cepstral coefficients (MFCC). A novel approach of incorporating a features fusion scheme based on a combination of the MFCC and the fundamental frequency is proposed with the aim of improving the performance of gender identification. Experimental results demonstrate that the gender identification performance using the SVM is significantly better than that of the GMM-based scheme. Moreover, the performance is substantially improved when the proposed features fusion technique is applied.

Short-Term Wind Speed Forecasting Using Support Vector Regression Optimized by Cuckoo Optimization Algorithm

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Jianzhou Wang

2015-01-01

Full Text Available This paper develops an effectively intelligent model to forecast short-term wind speed series. A hybrid forecasting technique is proposed based on recurrence plot (RP and optimized support vector regression (SVR. Wind caused by the interaction of meteorological systems makes itself extremely unsteady and difficult to forecast. To understand the wind system, the wind speed series is analyzed using RP. Then, the SVR model is employed to forecast wind speed, in which the input variables are selected by RP, and two crucial parameters, including the penalties factor and gamma of the kernel function RBF, are optimized by various optimization algorithms. Those optimized algorithms are genetic algorithm (GA, particle swarm optimization algorithm (PSO, and cuckoo optimization algorithm (COA. Finally, the optimized SVR models, including COA-SVR, PSO-SVR, and GA-SVR, are evaluated based on some criteria and a hypothesis test. The experimental results show that (1 analysis of RP reveals that wind speed has short-term predictability on a short-term time scale, (2 the performance of the COA-SVR model is superior to that of the PSO-SVR and GA-SVR methods, especially for the jumping samplings, and (3 the COA-SVR method is statistically robust in multi-step-ahead prediction and can be applied to practical wind farm applications.

Dynamic Heat Supply Prediction Using Support Vector Regression Optimized by Particle Swarm Optimization Algorithm

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Meiping Wang

2016-01-01

Full Text Available We developed an effective intelligent model to predict the dynamic heat supply of heat source. A hybrid forecasting method was proposed based on support vector regression (SVR model-optimized particle swarm optimization (PSO algorithms. Due to the interaction of meteorological conditions and the heating parameters of heating system, it is extremely difficult to forecast dynamic heat supply. Firstly, the correlations among heat supply and related influencing factors in the heating system were analyzed through the correlation analysis of statistical theory. Then, the SVR model was employed to forecast dynamic heat supply. In the model, the input variables were selected based on the correlation analysis and three crucial parameters, including the penalties factor, gamma of the kernel RBF, and insensitive loss function, were optimized by PSO algorithms. The optimized SVR model was compared with the basic SVR, optimized genetic algorithm-SVR (GA-SVR, and artificial neural network (ANN through six groups of experiment data from two heat sources. The results of the correlation coefficient analysis revealed the relationship between the influencing factors and the forecasted heat supply and determined the input variables. The performance of the PSO-SVR model is superior to those of the other three models. The PSO-SVR method is statistically robust and can be applied to practical heating system.

Object Recognition System-on-Chip Using the Support Vector Machines

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Houzet Dominique

2005-01-01

Full Text Available The first aim of this work is to propose the design of a system-on-chip (SoC platform dedicated to digital image and signal processing, which is tuned to implement efficiently multiply-and-accumulate (MAC vector/matrix operations. The second aim of this work is to implement a recent promising neural network method, namely, the support vector machine (SVM used for real-time object recognition, in order to build a vision machine. With such a reconfigurable and programmable SoC platform, it is possible to implement any SVM function dedicated to any object recognition problem. The final aim is to obtain an automatic reconfiguration of the SoC platform, based on the results of the learning phase on an objects' database, which makes it possible to recognize practically any object without manual programming. Recognition can be of any kind that is from image to signal data. Such a system is a general-purpose automatic classifier. Many applications can be considered as a classification problem, but are usually treated specifically in order to optimize the cost of the implemented solution. The cost of our approach is more important than a dedicated one, but in a near future, hundreds of millions of gates will be common and affordable compared to the design cost. What we are proposing here is a general-purpose classification neural network implemented on a reconfigurable SoC platform. The first version presented here is limited in size and thus in object recognition performances, but can be easily upgraded according to technology improvements.

Analysis of programming properties and the row-column generation method for 1-norm support vector machines.

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Zhang, Li; Zhou, WeiDa

2013-12-01

This paper deals with fast methods for training a 1-norm support vector machine (SVM). First, we define a specific class of linear programming with many sparse constraints, i.e., row-column sparse constraint linear programming (RCSC-LP). In nature, the 1-norm SVM is a sort of RCSC-LP. In order to construct subproblems for RCSC-LP and solve them, a family of row-column generation (RCG) methods is introduced. RCG methods belong to a category of decomposition techniques, and perform row and column generations in a parallel fashion. Specially, for the 1-norm SVM, the maximum size of subproblems of RCG is identical with the number of Support Vectors (SVs). We also introduce a semi-deleting rule for RCG methods and prove the convergence of RCG methods when using the semi-deleting rule. Experimental results on toy data and real-world datasets illustrate that it is efficient to use RCG to train the 1-norm SVM, especially in the case of small SVs. Copyright © 2013 Elsevier Ltd. All rights reserved.

Support Vector Machines Trained with Evolutionary Algorithms Employing Kernel Adatron for Large Scale Classification of Protein Structures.

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Arana-Daniel, Nancy; Gallegos, Alberto A; López-Franco, Carlos; Alanís, Alma Y; Morales, Jacob; López-Franco, Adriana

2016-01-01

With the increasing power of computers, the amount of data that can be processed in small periods of time has grown exponentially, as has the importance of classifying large-scale data efficiently. Support vector machines have shown good results classifying large amounts of high-dimensional data, such as data generated by protein structure prediction, spam recognition, medical diagnosis, optical character recognition and text classification, etc. Most state of the art approaches for large-scale learning use traditional optimization methods, such as quadratic programming or gradient descent, which makes the use of evolutionary algorithms for training support vector machines an area to be explored. The present paper proposes an approach that is simple to implement based on evolutionary algorithms and Kernel-Adatron for solving large-scale classification problems, focusing on protein structure prediction. The functional properties of proteins depend upon their three-dimensional structures. Knowing the structures of proteins is crucial for biology and can lead to improvements in areas such as medicine, agriculture and biofuels.

Distributed collaborative probabilistic design for turbine blade-tip radial running clearance using support vector machine of regression

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Fei, Cheng-Wei; Bai, Guang-Chen

2014-12-01

To improve the computational precision and efficiency of probabilistic design for mechanical dynamic assembly like the blade-tip radial running clearance (BTRRC) of gas turbine, a distribution collaborative probabilistic design method-based support vector machine of regression (SR)(called as DCSRM) is proposed by integrating distribution collaborative response surface method and support vector machine regression model. The mathematical model of DCSRM is established and the probabilistic design idea of DCSRM is introduced. The dynamic assembly probabilistic design of aeroengine high-pressure turbine (HPT) BTRRC is accomplished to verify the proposed DCSRM. The analysis results reveal that the optimal static blade-tip clearance of HPT is gained for designing BTRRC, and improving the performance and reliability of aeroengine. The comparison of methods shows that the DCSRM has high computational accuracy and high computational efficiency in BTRRC probabilistic analysis. The present research offers an effective way for the reliability design of mechanical dynamic assembly and enriches mechanical reliability theory and method.

Performance and optimization of support vector machines in high-energy physics classification problems

Energy Technology Data Exchange (ETDEWEB)

Sahin, M.Oe.; Kruecker, D.; Melzer-Pellmann, I.A.

2016-01-15

In this paper we promote the use of Support Vector Machines (SVM) as a machine learning tool for searches in high-energy physics. As an example for a new-physics search we discuss the popular case of Supersymmetry at the Large Hadron Collider. We demonstrate that the SVM is a valuable tool and show that an automated discovery-significance based optimization of the SVM hyper-parameters is a highly efficient way to prepare an SVM for such applications. A new C++ LIBSVM interface called SVM-HINT is developed and available on Github.

Performance and optimization of support vector machines in high-energy physics classification problems

International Nuclear Information System (INIS)

Sahin, M.Oe.; Kruecker, D.; Melzer-Pellmann, I.A.

2016-01-01

In this paper we promote the use of Support Vector Machines (SVM) as a machine learning tool for searches in high-energy physics. As an example for a new-physics search we discuss the popular case of Supersymmetry at the Large Hadron Collider. We demonstrate that the SVM is a valuable tool and show that an automated discovery-significance based optimization of the SVM hyper-parameters is a highly efficient way to prepare an SVM for such applications. A new C++ LIBSVM interface called SVM-HINT is developed and available on Github.

A Subdivision-Based Representation for Vector Image Editing.

Science.gov (United States)

Liao, Zicheng; Hoppe, Hugues; Forsyth, David; Yu, Yizhou

2012-11-01

Vector graphics has been employed in a wide variety of applications due to its scalability and editability. Editability is a high priority for artists and designers who wish to produce vector-based graphical content with user interaction. In this paper, we introduce a new vector image representation based on piecewise smooth subdivision surfaces, which is a simple, unified and flexible framework that supports a variety of operations, including shape editing, color editing, image stylization, and vector image processing. These operations effectively create novel vector graphics by reusing and altering existing image vectorization results. Because image vectorization yields an abstraction of the original raster image, controlling the level of detail of this abstraction is highly desirable. To this end, we design a feature-oriented vector image pyramid that offers multiple levels of abstraction simultaneously. Our new vector image representation can be rasterized efficiently using GPU-accelerated subdivision. Experiments indicate that our vector image representation achieves high visual quality and better supports editing operations than existing representations.

Cognitive Development Optimization Algorithm Based Support Vector Machines for Determining Diabetes

Directory of Open Access Journals (Sweden)

Utku Kose

2016-03-01

Full Text Available The definition, diagnosis and classification of Diabetes Mellitus and its complications are very important. First of all, the World Health Organization (WHO and other societies, as well as scientists have done lots of studies regarding this subject. One of the most important research interests of this subject is the computer supported decision systems for diagnosing diabetes. In such systems, Artificial Intelligence techniques are often used for several disease diagnostics to streamline the diagnostic process in daily routine and avoid misdiagnosis. In this study, a diabetes diagnosis system, which is formed via both Support Vector Machines (SVM and Cognitive Development Optimization Algorithm (CoDOA has been proposed. Along the training of SVM, CoDOA was used for determining the sigma parameter of the Gauss (RBF kernel function, and eventually, a classification process was made over the diabetes data set, which is related to Pima Indians. The proposed approach offers an alternative solution to the field of Artificial Intelligence-based diabetes diagnosis, and contributes to the related literature on diagnosis processes.

Facial Expression Recognition using Multiclass Ensemble Least-Square Support Vector Machine

Science.gov (United States)

Lawi, Armin; Sya'Rani Machrizzandi, M.

2018-03-01

Facial expression is one of behavior characteristics of human-being. The use of biometrics technology system with facial expression characteristics makes it possible to recognize a person’s mood or emotion. The basic components of facial expression analysis system are face detection, face image extraction, facial classification and facial expressions recognition. This paper uses Principal Component Analysis (PCA) algorithm to extract facial features with expression parameters, i.e., happy, sad, neutral, angry, fear, and disgusted. Then Multiclass Ensemble Least-Squares Support Vector Machine (MELS-SVM) is used for the classification process of facial expression. The result of MELS-SVM model obtained from our 185 different expression images of 10 persons showed high accuracy level of 99.998% using RBF kernel.

Data on Support Vector Machines (SVM model to forecast photovoltaic power

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M. Malvoni

2016-12-01

Full Text Available The data concern the photovoltaic (PV power, forecasted by a hybrid model that considers weather variations and applies a technique to reduce the input data size, as presented in the paper entitled “Photovoltaic forecast based on hybrid pca-lssvm using dimensionality reducted data” (M. Malvoni, M.G. De Giorgi, P.M. Congedo, 2015 [1]. The quadratic Renyi entropy criteria together with the principal component analysis (PCA are applied to the Least Squares Support Vector Machines (LS-SVM to predict the PV power in the day-ahead time frame. The data here shared represent the proposed approach results. Hourly PV power predictions for 1,3,6,12, 24 ahead hours and for different data reduction sizes are provided in Supplementary material.

Chikungunya Virus–Vector Interactions

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Lark L. Coffey

2014-11-01

Full Text Available Chikungunya virus (CHIKV is a mosquito-borne alphavirus that causes chikungunya fever, a severe, debilitating disease that often produces chronic arthralgia. Since 2004, CHIKV has emerged in Africa, Indian Ocean islands, Asia, Europe, and the Americas, causing millions of human infections. Central to understanding CHIKV emergence is knowledge of the natural ecology of transmission and vector infection dynamics. This review presents current understanding of CHIKV infection dynamics in mosquito vectors and its relationship to human disease emergence. The following topics are reviewed: CHIKV infection and vector life history traits including transmission cycles, genetic origins, distribution, emergence and spread, dispersal, vector competence, vector immunity and microbial interactions, and co-infection by CHIKV and other arboviruses. The genetics of vector susceptibility and host range changes, population heterogeneity and selection for the fittest viral genomes, dual host cycling and its impact on CHIKV adaptation, viral bottlenecks and intrahost diversity, and adaptive constraints on CHIKV evolution are also discussed. The potential for CHIKV re-emergence and expansion into new areas and prospects for prevention via vector control are also briefly reviewed.

[Construction and selection of effective mouse Smad6 recombinant lenti-virus interference vectors].

Science.gov (United States)

Yu, Jing; Qi, Mengchun; Deng, Jiupeng; Liu, Gang; Chen, Huaiqing

2010-10-01

This experiment was designed to construct mouse Smad6 recombinant RNA interference vectors and determine their interference effects on bone marrow mesenchymal stem cells (BMSCs). Three recombinant Smad6 RNA interference vectors were constructed by molecular clone techniques with a lenti-virus vector expressing green fluorescent protein (GFP), and the correctness of recombinant vectors was verified by DNA sequencing. Mouse BMSCs were used for transfection experiments and BMP-2 was in use for osteogenic induction of MSCs. The transfection efficiency of recombinant vectors was examined by Laser confocal scanning microscope and the interference effect of recombinant vectors on Smad6 gene expression was determined by real-time RT-PCR and Western blot, respectively. Three Smad6 recombinant RNA interference vectors were successfully constructed and their correctness was proved by DNA sequencing. After transfection, GFPs were effectively expressed in MSCs and all of three recombinant vectors gained high transfection efficiency (> 95%). Both real-time PCR and Western blot examination indicated that among three recombinant vectors, No. 2 Svector had the best interference effect and the interference effect was nearly 91% at protein level. In conclusion, Mouse recombinant Smad6 RNA interference (RNAi) vector was successfully constructed and it provided an effective tool for further studies on BMP signal pathways.

Study of The Vector Product using Three Dimensions Vector Card of Engineering in Pathumwan Institute of Technology

Science.gov (United States)

Mueanploy, Wannapa

2015-06-01

The objective of this research was to offer the way to improve engineering students in Physics topic of vector product. The sampling of this research was the engineering students at Pathumwan Institute of Technology during the first semester of academic year 2013. 1) Select 120 students by random sampling are asked to fill in a satisfaction questionnaire scale, to select size of three dimensions vector card in order to apply in the classroom. 2) Select 60 students by random sampling to do achievement test and take the test to be used in the classroom. The methods used in analysis of achievement test by the Kuder-Richardson Method (KR- 20). The results show that 12 items of achievement test are appropriate to be applied in the classroom. The achievement test gets Difficulty (P) = 0.40-0.67, Discrimination = 0.33-0.73 and Reliability (r) = 0.70.The experimental in the classroom. 3) Select 60 students by random sampling divide into two groups; group one (the controlled group) with 30 students was chosen to study in the vector product lesson by the regular teaching method. Group two (the experimental group) with 30 students was chosen to learn the vector product lesson with three dimensions vector card. 4) Analyzed data between the controlled group and the experimental group, the result showed that experimental group got higher achievement test than the controlled group significant at .01 level.

[Discrimination of varieties of borneol using terahertz spectra based on principal component analysis and support vector machine].

Science.gov (United States)

Li, Wu; Hu, Bing; Wang, Ming-wei

2014-12-01

In the present paper, the terahertz time-domain spectroscopy (THz-TDS) identification model of borneol based on principal component analysis (PCA) and support vector machine (SVM) was established. As one Chinese common agent, borneol needs a rapid, simple and accurate detection and identification method for its different source and being easily confused in the pharmaceutical and trade links. In order to assure the quality of borneol product and guard the consumer's right, quickly, efficiently and correctly identifying borneol has significant meaning to the production and transaction of borneol. Terahertz time-domain spectroscopy is a new spectroscopy approach to characterize material using terahertz pulse. The absorption terahertz spectra of blumea camphor, borneol camphor and synthetic borneol were measured in the range of 0.2 to 2 THz with the transmission THz-TDS. The PCA scores of 2D plots (PC1 X PC2) and 3D plots (PC1 X PC2 X PC3) of three kinds of borneol samples were obtained through PCA analysis, and both of them have good clustering effect on the 3 different kinds of borneol. The value matrix of the first 10 principal components (PCs) was used to replace the original spectrum data, and the 60 samples of the three kinds of borneol were trained and then the unknown 60 samples were identified. Four kinds of support vector machine model of different kernel functions were set up in this way. Results show that the accuracy of identification and classification of SVM RBF kernel function for three kinds of borneol is 100%, and we selected the SVM with the radial basis kernel function to establish the borneol identification model, in addition, in the noisy case, the classification accuracy rates of four SVM kernel function are above 85%, and this indicates that SVM has strong generalization ability. This study shows that PCA with SVM method of borneol terahertz spectroscopy has good classification and identification effects, and provides a new method for species

Short-term wind speed prediction using an unscented Kalman filter based state-space support vector regression approach

International Nuclear Information System (INIS)

Chen, Kuilin; Yu, Jie

2014-01-01

Highlights: • A novel hybrid modeling method is proposed for short-term wind speed forecasting. • Support vector regression model is constructed to formulate nonlinear state-space framework. • Unscented Kalman filter is adopted to recursively update states under random uncertainty. • The new SVR–UKF approach is compared to several conventional methods for short-term wind speed prediction. • The proposed method demonstrates higher prediction accuracy and reliability. - Abstract: Accurate wind speed forecasting is becoming increasingly important to improve and optimize renewable wind power generation. Particularly, reliable short-term wind speed prediction can enable model predictive control of wind turbines and real-time optimization of wind farm operation. However, this task remains challenging due to the strong stochastic nature and dynamic uncertainty of wind speed. In this study, unscented Kalman filter (UKF) is integrated with support vector regression (SVR) based state-space model in order to precisely update the short-term estimation of wind speed sequence. In the proposed SVR–UKF approach, support vector regression is first employed to formulate a nonlinear state-space model and then unscented Kalman filter is adopted to perform dynamic state estimation recursively on wind sequence with stochastic uncertainty. The novel SVR–UKF method is compared with artificial neural networks (ANNs), SVR, autoregressive (AR) and autoregressive integrated with Kalman filter (AR-Kalman) approaches for predicting short-term wind speed sequences collected from three sites in Massachusetts, USA. The forecasting results indicate that the proposed method has much better performance in both one-step-ahead and multi-step-ahead wind speed predictions than the other approaches across all the locations

The major antigenic membrane protein of "Candidatus Phytoplasma asteris" selectively interacts with ATP synthase and actin of leafhopper vectors.

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Luciana Galetto

Full Text Available Phytoplasmas, uncultivable phloem-limited phytopathogenic wall-less bacteria, represent a major threat to agriculture worldwide. They are transmitted in a persistent, propagative manner by phloem-sucking Hemipteran insects. Phytoplasma membrane proteins are in direct contact with hosts and are presumably involved in determining vector specificity. Such a role has been proposed for phytoplasma transmembrane proteins encoded by circular extrachromosomal elements, at least one of which is a plasmid. Little is known about the interactions between major phytoplasma antigenic membrane protein (Amp and insect vector proteins. The aims of our work were to identify vector proteins interacting with Amp and to investigate their role in transmission specificity. In controlled transmission experiments, four Hemipteran species were identified as vectors of "Candidatus Phytoplasma asteris", the chrysanthemum yellows phytoplasmas (CYP strain, and three others as non-vectors. Interactions between a labelled (recombinant CYP Amp and insect proteins were analysed by far Western blots and affinity chromatography. Amp interacted specifically with a few proteins from vector species only. Among Amp-binding vector proteins, actin and both the α and β subunits of ATP synthase were identified by mass spectrometry and Western blots. Immunofluorescence confocal microscopy and Western blots of plasma membrane and mitochondrial fractions confirmed the localisation of ATP synthase, generally known as a mitochondrial protein, in plasma membranes of midgut and salivary gland cells in the vector Euscelidius variegatus. The vector-specific interaction between phytoplasma Amp and insect ATP synthase is demonstrated for the first time, and this work also supports the hypothesis that host actin is involved in the internalization and intracellular motility of phytoplasmas within their vectors. Phytoplasma Amp is hypothesized to play a crucial role in insect transmission specificity.

Highly predictive support vector machine (SVM) models for anthrax toxin lethal factor (LF) inhibitors.

Science.gov (United States)

Zhang, Xia; Amin, Elizabeth Ambrose

2016-01-01

Anthrax is a highly lethal, acute infectious disease caused by the rod-shaped, Gram-positive bacterium Bacillus anthracis. The anthrax toxin lethal factor (LF), a zinc metalloprotease secreted by the bacilli, plays a key role in anthrax pathogenesis and is chiefly responsible for anthrax-related toxemia and host death, partly via inactivation of mitogen-activated protein kinase kinase (MAPKK) enzymes and consequent disruption of key cellular signaling pathways. Antibiotics such as fluoroquinolones are capable of clearing the bacilli but have no effect on LF-mediated toxemia; LF itself therefore remains the preferred target for toxin inactivation. However, currently no LF inhibitor is available on the market as a therapeutic, partly due to the insufficiency of existing LF inhibitor scaffolds in terms of efficacy, selectivity, and toxicity. In the current work, we present novel support vector machine (SVM) models with high prediction accuracy that are designed to rapidly identify potential novel, structurally diverse LF inhibitor chemical matter from compound libraries. These SVM models were trained and validated using 508 compounds with published LF biological activity data and 847 inactive compounds deposited in the Pub Chem BioAssay database. One model, M1, demonstrated particularly favorable selectivity toward highly active compounds by correctly predicting 39 (95.12%) out of 41 nanomolar-level LF inhibitors, 46 (93.88%) out of 49 inactives, and 844 (99.65%) out of 847 Pub Chem inactives in external, unbiased test sets. These models are expected to facilitate the prediction of LF inhibitory activity for existing molecules, as well as identification of novel potential LF inhibitors from large datasets. Copyright © 2015 Elsevier Inc. All rights reserved.

Prediction of Hydrocarbon Reservoirs Permeability Using Support Vector Machine

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R. Gholami

2012-01-01

Full Text Available Permeability is a key parameter associated with the characterization of any hydrocarbon reservoir. In fact, it is not possible to have accurate solutions to many petroleum engineering problems without having accurate permeability value. The conventional methods for permeability determination are core analysis and well test techniques. These methods are very expensive and time consuming. Therefore, attempts have usually been carried out to use artificial neural network for identification of the relationship between the well log data and core permeability. In this way, recent works on artificial intelligence techniques have led to introduce a robust machine learning methodology called support vector machine. This paper aims to utilize the SVM for predicting the permeability of three gas wells in the Southern Pars field. Obtained results of SVM showed that the correlation coefficient between core and predicted permeability is 0.97 for testing dataset. Comparing the result of SVM with that of a general regression neural network (GRNN revealed that the SVM approach is faster and more accurate than the GRNN in prediction of hydrocarbon reservoirs permeability.

Agricultural drought prediction using climate indices based on Support Vector Regression in Xiangjiang River basin.

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Tian, Ye; Xu, Yue-Ping; Wang, Guoqing

2018-05-01

Drought can have a substantial impact on the ecosystem and agriculture of the affected region and does harm to local economy. This study aims to analyze the relation between soil moisture and drought and predict agricultural drought in Xiangjiang River basin. The agriculture droughts are presented with the Precipitation-Evapotranspiration Index (SPEI). The Support Vector Regression (SVR) model incorporating climate indices is developed to predict the agricultural droughts. Analysis of climate forcing including El Niño Southern Oscillation and western Pacific subtropical high (WPSH) are carried out to select climate indices. The results show that SPEI of six months time scales (SPEI-6) represents the soil moisture better than that of three and one month time scale on drought duration, severity and peaks. The key factor that influences the agriculture drought is the Ridge Point of WPSH, which mainly controls regional temperature. The SVR model incorporating climate indices, especially ridge point of WPSH, could improve the prediction accuracy compared to that solely using drought index by 4.4% in training and 5.1% in testing measured by Nash Sutcliffe efficiency coefficient (NSE) for three month lead time. The improvement is more significant for the prediction with one month lead (15.8% in training and 27.0% in testing) than that with three months lead time. However, it needs to be cautious in selection of the input parameters, since adding redundant information could have a counter effect in attaining a better prediction. Copyright © 2017 Elsevier B.V. All rights reserved.

Experimental Investigation for Fault Diagnosis Based on a Hybrid Approach Using Wavelet Packet and Support Vector Classification

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Pengfei Li

2014-01-01

Full Text Available To deal with the difficulty to obtain a large number of fault samples under the practical condition for mechanical fault diagnosis, a hybrid method that combined wavelet packet decomposition and support vector classification (SVC is proposed. The wavelet packet is employed to decompose the vibration signal to obtain the energy ratio in each frequency band. Taking energy ratios as feature vectors, the pattern recognition results are obtained by the SVC. The rolling bearing and gear fault diagnostic results of the typical experimental platform show that the present approach is robust to noise and has higher classification accuracy and, thus, provides a better way to diagnose mechanical faults under the condition of small fault samples.

Modeling and Forecast Biological Oxygen Demand (BOD using Combination Support Vector Machine with Wavelet Transform

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Abazar Solgi

2017-06-01

given from Fourier transform that was introduced in the nineteenth-century. Overall, concept of wavelet transform for current theory was presented by Morlet and a team under the supervision of Alex Grossman at the Research Center for Theoretical Physics Marcel in France. After the parameters decomposition using wavelet analysis and using principal component analysis (PCA, the main components were determined. These components are then used as input to the support vector machine model to obtain a hybrid model of Wavelet-SVM (WSVM. For this study, a series of monthly of BOD in Karun River in Molasani station and auxiliary variables dissolved oxygen (DO, temperature and monthly river flow in a 13 years period (2002-2014 were used. Results and Discussion: To run the SVM model, seven different combinations were evaluated. Combination 6 which was contained of 4 parameters including BOD, dissolved oxygen (DO, temperature and monthly river flow with a time lag have best performance. The best structure had RMSE equal to 0.0338 and the coefficient of determination equal to 0.84. For achieving the results of the WSVM, the wavelet transform and input parameters were decomposed to sub-signal, then this sub-signals were studied with Principal component analysis (PCA method and important components were entered as inputs to SVM model to obtain the hybrid model WSVM. After numerous run this program in certain modes and compare them with each other, the results was obtained. One of the key points about the choice of the mother wavelet is the time series. So, the patterns of the mother wavelet functions that can better adapt to diagram curved of time series can do the mappings operation and therefore will have better results. In this study, according to different wavelet tests and according to the above note, four types of mother wavelet functions Haar, Db2, Db7 and Sym3 were selected. Conclusions: Compare the results of the monthly modeling indicate that the use of wavelet transforms can

Support Vector Machines for Multitemporal and Multisensor Change Detection in a Mining Area

Science.gov (United States)

Hecheltjen, Antje; Waske, Bjorn; Thonfeld, Frank; Braun, Matthias; Menz, Gunter

2010-12-01

Long-term change detection often implies the challenge of incorporating multitemporal data from different sensors. Most of the conventional change detection algorithms are designed for bi-temporal datasets from the same sensors detecting only the existence of changes. The labeling of change areas remains a difficult task. To overcome such drawbacks, much attention has been given lately to algorithms arising from machine learning, such as Support Vector Machines (SVMs). While SVMs have been applied successfully for land cover classifications, the exploitation of this approach for change detection is still in its infancy. Few studies have already proven the applicability of SVMs for bi- and multitemporal change detection using data from one sensor only. In this paper we demonstrate the application of SVM for multitemporal and -sensor change detection. Our study site covers lignite open pit mining areas in the German state North Rhine-Westphalia. The dataset consists of bi-temporal Landsat data and multi-temporal ERS SAR data covering two time slots (2001 and 2009). The SVM is conducted using the IDL program imageSVM. Change is deduced from one time slot to the next resulting in two change maps. In contrast to change detection, which is based on post-classification comparison, change detection is seen here as a specific classification problem. Thus, changes are directly classified from a layer-stack of the two years. To reduce the number of change classes, we created a change mask using the magnitude of Change Vector Analysis (CVA). Training data were selected for different change classes (e.g. forest to mining or mining to agriculture) as well as for the no-change classes (e.g. agriculture). Subsequently, they were divided in two independent sets for training the SVMs and accuracy assessment, respectively. Our study shows the applicability of SVMs to classify changes via SVMs. The proposed method yielded a change map of reclaimed and active mines. The use of ERS SAR

Support vector machines and evolutionary algorithms for classification single or together?

CERN Document Server

Stoean, Catalin

2014-01-01

When discussing classification, support vector machines are known to be a capable and efficient technique to learn and predict with high accuracy within a quick time frame. Yet, their black box means to do so make the practical users quite circumspect about relying on it, without much understanding of the how and why of its predictions. The question raised in this book is how can this ‘masked hero’ be made more comprehensible and friendly to the public: provide a surrogate model for its hidden optimization engine, replace the method completely or appoint a more friendly approach to tag along and offer the much desired explanations? Evolutionary algorithms can do all these and this book presents such possibilities of achieving high accuracy, comprehensibility, reasonable runtime as well as unconstrained performance.

Reservoir Inflow Prediction under GCM Scenario Downscaled by Wavelet Transform and Support Vector Machine Hybrid Models

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Gusfan Halik

2015-01-01

Full Text Available Climate change has significant impacts on changing precipitation patterns causing the variation of the reservoir inflow. Nowadays, Indonesian hydrologist performs reservoir inflow prediction according to the technical guideline of Pd-T-25-2004-A. This technical guideline does not consider the climate variables directly, resulting in significant deviation to the observation results. This research intends to predict the reservoir inflow using the statistical downscaling (SD of General Circulation Model (GCM outputs. The GCM outputs are obtained from the National Center for Environmental Prediction/National Center for Atmospheric Research Reanalysis (NCEP/NCAR Reanalysis. A new proposed hybrid SD model named Wavelet Support Vector Machine (WSVM was utilized. It is a combination of the Multiscale Principal Components Analysis (MSPCA and nonlinear Support Vector Machine regression. The model was validated at Sutami Reservoir, Indonesia. Training and testing were carried out using data of 1991–2008 and 2008–2012, respectively. The results showed that MSPCA produced better extracting data than PCA. The WSVM generated better reservoir inflow prediction than the one of technical guideline. Moreover, this research also applied WSVM for future reservoir inflow prediction based on GCM ECHAM5 and scenario SRES A1B.

Detection of sensor degradation using K-means clustering and support vector regression in nuclear power plant

International Nuclear Information System (INIS)

Seo, Inyong; Ha, Bokam; Lee, Sungwoo; Shin, Changhoon; Lee, Jaeyong; Kim, Seongjun

2011-01-01

In a nuclear power plant (NPP), periodic sensor calibrations are required to assure sensors are operating correctly. However, only a few faulty sensors are found to be rectified. For the safe operation of an NPP and the reduction of unnecessary calibration, on-line calibration monitoring is needed. In this study, an on-line calibration monitoring called KPCSVR using k-means clustering and principal component based Auto-Associative support vector regression (PCSVR) is proposed for nuclear power plant. To reduce the training time of the model, k-means clustering method was used. Response surface methodology is employed to efficiently determine the optimal values of support vector regression hyperparameters. The proposed KPCSVR model was confirmed with actual plant data of Kori Nuclear Power Plant Unit 3 which were measured from the primary and secondary systems of the plant, and compared with the PCSVR model. By using data clustering, the average accuracy of PCSVR improved from 1.228×10 -4 to 0.472×10 -4 and the average sensitivity of PCSVR from 0.0930 to 0.0909, which results in good detection of sensor drift. Moreover, the training time is greatly reduced from 123.5 to 31.5 sec. (author)

Using support vector machines to identify literacy skills: Evidence from eye movements.

Science.gov (United States)

Lou, Ya; Liu, Yanping; Kaakinen, Johanna K; Li, Xingshan

2017-06-01

Is inferring readers' literacy skills possible by analyzing their eye movements during text reading? This study used Support Vector Machines (SVM) to analyze eye movement data from 61 undergraduate students who read a multiple-paragraph, multiple-topic expository text. Forward fixation time, first-pass rereading time, second-pass fixation time, and regression path reading time on different regions of the text were provided as features. The SVM classification algorithm assisted in distinguishing high-literacy-skilled readers from low-literacy-skilled readers with 80.3 % accuracy. Results demonstrate the effectiveness of combining eye tracking and machine learning techniques to detect readers with low literacy skills, and suggest that such approaches can be potentially used in predicting other cognitive abilities.

Adaptive Digital Watermarking Scheme Based on Support Vector Machines and Optimized Genetic Algorithm

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Xiaoyi Zhou

2018-01-01

Full Text Available Digital watermarking is an effective solution to the problem of copyright protection, thus maintaining the security of digital products in the network. An improved scheme to increase the robustness of embedded information on the basis of discrete cosine transform (DCT domain is proposed in this study. The embedding process consisted of two main procedures. Firstly, the embedding intensity with support vector machines (SVMs was adaptively strengthened by training 1600 image blocks which are of different texture and luminance. Secondly, the embedding position with the optimized genetic algorithm (GA was selected. To optimize GA, the best individual in the first place of each generation directly went into the next generation, and the best individual in the second position participated in the crossover and the mutation process. The transparency reaches 40.5 when GA’s generation number is 200. A case study was conducted on a 256 × 256 standard Lena image with the proposed method. After various attacks (such as cropping, JPEG compression, Gaussian low-pass filtering (3,0.5, histogram equalization, and contrast increasing (0.5,0.6 on the watermarked image, the extracted watermark was compared with the original one. Results demonstrate that the watermark can be effectively recovered after these attacks. Even though the algorithm is weak against rotation attacks, it provides high quality in imperceptibility and robustness and hence it is a successful candidate for implementing novel image watermarking scheme meeting real timelines.

Explaining Support Vector Machines: A Color Based Nomogram.

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Vanya Van Belle

Full Text Available Support vector machines (SVMs are very popular tools for classification, regression and other problems. Due to the large choice of kernels they can be applied with, a large variety of data can be analysed using these tools. Machine learning thanks its popularity to the good performance of the resulting models. However, interpreting the models is far from obvious, especially when non-linear kernels are used. Hence, the methods are used as black boxes. As a consequence, the use of SVMs is less supported in areas where interpretability is important and where people are held responsible for the decisions made by models.In this work, we investigate whether SVMs using linear, polynomial and RBF kernels can be explained such that interpretations for model-based decisions can be provided. We further indicate when SVMs can be explained and in which situations interpretation of SVMs is (hitherto not possible. Here, explainability is defined as the ability to produce the final decision based on a sum of contributions which depend on one single or at most two input variables.Our experiments on simulated and real-life data show that explainability of an SVM depends on the chosen parameter values (degree of polynomial kernel, width of RBF kernel and regularization constant. When several combinations of parameter values yield the same cross-validation performance, combinations with a lower polynomial degree or a larger kernel width have a higher chance of being explainable.This work summarizes SVM classifiers obtained with linear, polynomial and RBF kernels in a single plot. Linear and polynomial kernels up to the second degree are represented exactly. For other kernels an indication of the reliability of the approximation is presented. The complete methodology is available as an R package and two apps and a movie are provided to illustrate the possibilities offered by the method.

Hybrid genetic algorithm tuned support vector machine regression for wave transmission prediction of horizontally interlaced multilayer moored floating pipe breakwater

Digital Repository Service at National Institute of Oceanography (India)

Patil, S.G.; Mandal, S.; Hegde, A.V.; Muruganandam, A.

Support Vector Machine (SVM) works on structural risk minimization principle that has greater generalization ability and is superior to the empirical risk minimization principle as adopted in conventional neural network models. However...

Estimating Frequency by Interpolation Using Least Squares Support Vector Regression

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Changwei Ma

2015-01-01

Full Text Available Discrete Fourier transform- (DFT- based maximum likelihood (ML algorithm is an important part of single sinusoid frequency estimation. As signal to noise ratio (SNR increases and is above the threshold value, it will lie very close to Cramer-Rao lower bound (CRLB, which is dependent on the number of DFT points. However, its mean square error (MSE performance is directly proportional to its calculation cost. As a modified version of support vector regression (SVR, least squares SVR (LS-SVR can not only still keep excellent capabilities for generalizing and fitting but also exhibit lower computational complexity. In this paper, therefore, LS-SVR is employed to interpolate on Fourier coefficients of received signals and attain high frequency estimation accuracy. Our results show that the proposed algorithm can make a good compromise between calculation cost and MSE performance under the assumption that the sample size, number of DFT points, and resampling points are already known.

Application of support vector machine for classification of multispectral data

International Nuclear Information System (INIS)

Bahari, Nurul Iman Saiful; Ahmad, Asmala; Aboobaider, Burhanuddin Mohd

2014-01-01

In this paper, support vector machine (SVM) is used to classify satellite remotely sensed multispectral data. The data are recorded from a Landsat-5 TM satellite with resolution of 30x30m. SVM finds the optimal separating hyperplane between classes by focusing on the training cases. The study area of Klang Valley has more than 10 land covers and classification using SVM has been done successfully without any pixel being unclassified. The training area is determined carefully by visual interpretation and with the aid of the reference map of the study area. The result obtained is then analysed for the accuracy and visual performance. Accuracy assessment is done by determination and discussion of Kappa coefficient value, overall and producer accuracy for each class (in pixels and percentage). While, visual analysis is done by comparing the classification data with the reference map. Overall the study shows that SVM is able to classify the land covers within the study area with a high accuracy

Using support vector machines in the multivariate state estimation technique

International Nuclear Information System (INIS)

Zavaljevski, N.; Gross, K.C.

1999-01-01

One approach to validate nuclear power plant (NPP) signals makes use of pattern recognition techniques. This approach often assumes that there is a set of signal prototypes that are continuously compared with the actual sensor signals. These signal prototypes are often computed based on empirical models with little or no knowledge about physical processes. A common problem of all data-based models is their limited ability to make predictions on the basis of available training data. Another problem is related to suboptimal training algorithms. Both of these potential shortcomings with conventional approaches to signal validation and sensor operability validation are successfully resolved by adopting a recently proposed learning paradigm called the support vector machine (SVM). The work presented here is a novel application of SVM for data-based modeling of system state variables in an NPP, integrated with a nonlinear, nonparametric technique called the multivariate state estimation technique (MSET), an algorithm developed at Argonne National Laboratory for a wide range of nuclear plant applications

Support Vector Data Descriptions and k-Means Clustering: One Class?

Science.gov (United States)

Gornitz, Nico; Lima, Luiz Alberto; Muller, Klaus-Robert; Kloft, Marius; Nakajima, Shinichi

2017-09-27

We present ClusterSVDD, a methodology that unifies support vector data descriptions (SVDDs) and k-means clustering into a single formulation. This allows both methods to benefit from one another, i.e., by adding flexibility using multiple spheres for SVDDs and increasing anomaly resistance and flexibility through kernels to k-means. In particular, our approach leads to a new interpretation of k-means as a regularized mode seeking algorithm. The unifying formulation further allows for deriving new algorithms by transferring knowledge from one-class learning settings to clustering settings and vice versa. As a showcase, we derive a clustering method for structured data based on a one-class learning scenario. Additionally, our formulation can be solved via a particularly simple optimization scheme. We evaluate our approach empirically to highlight some of the proposed benefits on artificially generated data, as well as on real-world problems, and provide a Python software package comprising various implementations of primal and dual SVDD as well as our proposed ClusterSVDD.

Electricity Load Forecasting Using Support Vector Regression with Memetic Algorithms

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Zhongyi Hu

2013-01-01

Full Text Available Electricity load forecasting is an important issue that is widely explored and examined in power systems operation literature and commercial transactions in electricity markets literature as well. Among the existing forecasting models, support vector regression (SVR has gained much attention. Considering the performance of SVR highly depends on its parameters; this study proposed a firefly algorithm (FA based memetic algorithm (FA-MA to appropriately determine the parameters of SVR forecasting model. In the proposed FA-MA algorithm, the FA algorithm is applied to explore the solution space, and the pattern search is used to conduct individual learning and thus enhance the exploitation of FA. Experimental results confirm that the proposed FA-MA based SVR model can not only yield more accurate forecasting results than the other four evolutionary algorithms based SVR models and three well-known forecasting models but also outperform the hybrid algorithms in the related existing literature.

Daily Peak Load Forecasting Based on Complete Ensemble Empirical Mode Decomposition with Adaptive Noise and Support Vector Machine Optimized by Modified Grey Wolf Optimization Algorithm

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Shuyu Dai

2018-01-01

Full Text Available Daily peak load forecasting is an important part of power load forecasting. The accuracy of its prediction has great influence on the formulation of power generation plan, power grid dispatching, power grid operation and power supply reliability of power system. Therefore, it is of great significance to construct a suitable model to realize the accurate prediction of the daily peak load. A novel daily peak load forecasting model, CEEMDAN-MGWO-SVM (Complete Ensemble Empirical Mode Decomposition with Adaptive Noise and Support Vector Machine Optimized by Modified Grey Wolf Optimization Algorithm, is proposed in this paper. Firstly, the model uses the complete ensemble empirical mode decomposition with adaptive noise (CEEMDAN algorithm to decompose the daily peak load sequence into multiple sub sequences. Then, the model of modified grey wolf optimization and support vector machine (MGWO-SVM is adopted to forecast the sub sequences. Finally, the forecasting sequence is reconstructed and the forecasting result is obtained. Using CEEMDAN can realize noise reduction for non-stationary daily peak load sequence, which makes the daily peak load sequence more regular. The model adopts the grey wolf optimization algorithm improved by introducing the population dynamic evolution operator and the nonlinear convergence factor to enhance the global search ability and avoid falling into the local optimum, which can better optimize the parameters of the SVM algorithm for improving the forecasting accuracy of daily peak load. In this paper, three cases are used to test the forecasting accuracy of the CEEMDAN-MGWO-SVM model. We choose the models EEMD-MGWO-SVM (Ensemble Empirical Mode Decomposition and Support Vector Machine Optimized by Modified Grey Wolf Optimization Algorithm, MGWO-SVM (Support Vector Machine Optimized by Modified Grey Wolf Optimization Algorithm, GWO-SVM (Support Vector Machine Optimized by Grey Wolf Optimization Algorithm, SVM (Support Vector

A Shellcode Detection Method Based on Full Native API Sequence and Support Vector Machine

Science.gov (United States)

Cheng, Yixuan; Fan, Wenqing; Huang, Wei; An, Jing

2017-09-01

Dynamic monitoring the behavior of a program is widely used to discriminate between benign program and malware. It is usually based on the dynamic characteristics of a program, such as API call sequence or API call frequency to judge. The key innovation of this paper is to consider the full Native API sequence and use the support vector machine to detect the shellcode. We also use the Markov chain to extract and digitize Native API sequence features. Our experimental results show that the method proposed in this paper has high accuracy and low detection rate.

CLOUD DETECTION OF OPTICAL SATELLITE IMAGES USING SUPPORT VECTOR MACHINE

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K.-Y. Lee

2016-06-01

Full Text Available Cloud covers are generally present in optical remote-sensing images, which limit the usage of acquired images and increase the difficulty of data analysis, such as image compositing, correction of atmosphere effects, calculations of vegetation induces, land cover classification, and land cover change detection. In previous studies, thresholding is a common and useful method in cloud detection. However, a selected threshold is usually suitable for certain cases or local study areas, and it may be failed in other cases. In other words, thresholding-based methods are data-sensitive. Besides, there are many exceptions to control, and the environment is changed dynamically. Using the same threshold value on various data is not effective. In this study, a threshold-free method based on Support Vector Machine (SVM is proposed, which can avoid the abovementioned problems. A statistical model is adopted to detect clouds instead of a subjective thresholding-based method, which is the main idea of this study. The features used in a classifier is the key to a successful classification. As a result, Automatic Cloud Cover Assessment (ACCA algorithm, which is based on physical characteristics of clouds, is used to distinguish the clouds and other objects. In the same way, the algorithm called Fmask (Zhu et al., 2012 uses a lot of thresholds and criteria to screen clouds, cloud shadows, and snow. Therefore, the algorithm of feature extraction is based on the ACCA algorithm and Fmask. Spatial and temporal information are also important for satellite images. Consequently, co-occurrence matrix and temporal variance with uniformity of the major principal axis are used in proposed method. We aim to classify images into three groups: cloud, non-cloud and the others. In experiments, images acquired by the Landsat 7 Enhanced Thematic Mapper Plus (ETM+ and images containing the landscapes of agriculture, snow area, and island are tested. Experiment results demonstrate

Cloud Detection of Optical Satellite Images Using Support Vector Machine

Science.gov (United States)

Lee, Kuan-Yi; Lin, Chao-Hung

2016-06-01

Cloud covers are generally present in optical remote-sensing images, which limit the usage of acquired images and increase the difficulty of data analysis, such as image compositing, correction of atmosphere effects, calculations of vegetation induces, land cover classification, and land cover change detection. In previous studies, thresholding is a common and useful method in cloud detection. However, a selected threshold is usually suitable for certain cases or local study areas, and it may be failed in other cases. In other words, thresholding-based methods are data-sensitive. Besides, there are many exceptions to control, and the environment is changed dynamically. Using the same threshold value on various data is not effective. In this study, a threshold-free method based on Support Vector Machine (SVM) is proposed, which can avoid the abovementioned problems. A statistical model is adopted to detect clouds instead of a subjective thresholding-based method, which is the main idea of this study. The features used in a classifier is the key to a successful classification. As a result, Automatic Cloud Cover Assessment (ACCA) algorithm, which is based on physical characteristics of clouds, is used to distinguish the clouds and other objects. In the same way, the algorithm called Fmask (Zhu et al., 2012) uses a lot of thresholds and criteria to screen clouds, cloud shadows, and snow. Therefore, the algorithm of feature extraction is based on the ACCA algorithm and Fmask. Spatial and temporal information are also important for satellite images. Consequently, co-occurrence matrix and temporal variance with uniformity of the major principal axis are used in proposed method. We aim to classify images into three groups: cloud, non-cloud and the others. In experiments, images acquired by the Landsat 7 Enhanced Thematic Mapper Plus (ETM+) and images containing the landscapes of agriculture, snow area, and island are tested. Experiment results demonstrate the detection

Automatic Sleep Staging using Multi-dimensional Feature Extraction and Multi-kernel Fuzzy Support Vector Machine

Directory of Open Access Journals (Sweden)

Yanjun Zhang

2014-01-01

Full Text Available This paper employed the clinical Polysomnographic (PSG data, mainly including all-night Electroencephalogram (EEG, Electrooculogram (EOG and Electromyogram (EMG signals of subjects, and adopted the American Academy of Sleep Medicine (AASM clinical staging manual as standards to realize automatic sleep staging. Authors extracted eighteen different features of EEG, EOG and EMG in time domains and frequency domains to construct the vectors according to the existing literatures as well as clinical experience. By adopting sleep samples self-learning, the linear combination of weights and parameters of multiple kernels of the fuzzy support vector machine (FSVM were learned and the multi-kernel FSVM (MK-FSVM was constructed. The overall agreement between the experts' scores and the results presented was 82.53%. Compared with previous results, the accuracy of N1 was improved to some extent while the accuracies of other stages were approximate, which well reflected the sleep structure. The staging algorithm proposed in this paper is transparent, and worth further investigation.

Chaotic particle swarm optimization algorithm in a support vector regression electric load forecasting model

International Nuclear Information System (INIS)

Hong, W.-C.

2009-01-01

Accurate forecasting of electric load has always been the most important issues in the electricity industry, particularly for developing countries. Due to the various influences, electric load forecasting reveals highly nonlinear characteristics. Recently, support vector regression (SVR), with nonlinear mapping capabilities of forecasting, has been successfully employed to solve nonlinear regression and time series problems. However, it is still lack of systematic approaches to determine appropriate parameter combination for a SVR model. This investigation elucidates the feasibility of applying chaotic particle swarm optimization (CPSO) algorithm to choose the suitable parameter combination for a SVR model. The empirical results reveal that the proposed model outperforms the other two models applying other algorithms, genetic algorithm (GA) and simulated annealing algorithm (SA). Finally, it also provides the theoretical exploration of the electric load forecasting support system (ELFSS)

Forecasting systems reliability based on support vector regression with genetic algorithms

International Nuclear Information System (INIS)

Chen, K.-Y.

2007-01-01

This study applies a novel neural-network technique, support vector regression (SVR), to forecast reliability in engine systems. The aim of this study is to examine the feasibility of SVR in systems reliability prediction by comparing it with the existing neural-network approaches and the autoregressive integrated moving average (ARIMA) model. To build an effective SVR model, SVR's parameters must be set carefully. This study proposes a novel approach, known as GA-SVR, which searches for SVR's optimal parameters using real-value genetic algorithms, and then adopts the optimal parameters to construct the SVR models. A real reliability data for 40 suits of turbochargers were employed as the data set. The experimental results demonstrate that SVR outperforms the existing neural-network approaches and the traditional ARIMA models based on the normalized root mean square error and mean absolute percentage error

Decision support system to select cover systems

International Nuclear Information System (INIS)

Bostick, K.V.

1995-01-01

The objective of this technology is to provide risk managers with a defensible, objective way to select capping alternatives for remediating radioactive and mixed waste landfills. The process of selecting containment cover technologies for mixed waste landfills requires consideration of many complex and interrelated technical, regulatory, and economic issues. A Decision Support System (DSS) is needed to integrate the knowledge of experts from scientific, engineering, and management disciplines to help in selecting the best capping practice for the site

A Semisupervised Support Vector Machines Algorithm for BCI Systems

Science.gov (United States)

Qin, Jianzhao; Li, Yuanqing; Sun, Wei

2007-01-01

As an emerging technology, brain-computer interfaces (BCIs) bring us new communication interfaces which translate brain activities into control signals for devices like computers, robots, and so forth. In this study, we propose a semisupervised support vector machine (SVM) algorithm for brain-computer interface (BCI) systems, aiming at reducing the time-consuming training process. In this algorithm, we apply a semisupervised SVM for translating the features extracted from the electrical recordings of brain into control signals. This SVM classifier is built from a small labeled data set and a large unlabeled data set. Meanwhile, to reduce the time for training semisupervised SVM, we propose a batch-mode incremental learning method, which can also be easily applied to the online BCI systems. Additionally, it is suggested in many studies that common spatial pattern (CSP) is very effective in discriminating two different brain states. However, CSP needs a sufficient labeled data set. In order to overcome the drawback of CSP, we suggest a two-stage feature extraction method for the semisupervised learning algorithm. We apply our algorithm to two BCI experimental data sets. The offline data analysis results demonstrate the effectiveness of our algorithm. PMID:18368141

Selective hydrogenation of citral over supported Pt catalysts: insight into support effects

Energy Technology Data Exchange (ETDEWEB)

Wang, Xiaofeng [Missouri University of Science and Technology, Department of Chemical and Biochemical Engineering (United States); Hu, Weiming; Deng, Baolin [University of Missouri, Department of Civil and Environmental Engineering (United States); Liang, Xinhua, E-mail: liangxin@mst.edu [Missouri University of Science and Technology, Department of Chemical and Biochemical Engineering (United States)

2017-04-15

Highly dispersed platinum (Pt) nanoparticles (NPs) were deposited on various substrates by atomic layer deposition (ALD) in a fluidized bed reactor at 300 °C. The substrates included multi-walled carbon nanotubes (MWCNTs), silica gel (SiO{sub 2}), commercial γ-Al{sub 2}O{sub 3}, and ALD-prepared porous Al{sub 2}O{sub 3} particles (ALD-Al{sub 2}O{sub 3}). The results of TEM analysis showed that ~1.3 nm Pt NPs were highly dispersed on all different supports. All catalysts were used for the reaction of selective hydrogenation of citral to unsaturated alcohols (UA), geraniol, and nerol. Both the structure and acidity of supports affected the activity and selectivity of Pt catalysts. Pt/SiO{sub 2} showed the highest activity due to the strong acidity of SiO{sub 2} and the conversion of citral reached 82% after 12 h with a selectivity of 58% of UA. Pt/MWCNTs showed the highest selectivity of UA, which reached 65% with a conversion of 38% due to its unique structure and electronic effect. The cycling experiments indicated that Pt/MWCNTs and Pt/ALD-Al{sub 2}O{sub 3} catalysts were more stable than Pt/SiO{sub 2}, as a result of the different interactions between the Pt NPs and the supports.

An introduction to vectors, vector operators and vector analysis

CERN Document Server

Joag, Pramod S

2016-01-01

Ideal for undergraduate and graduate students of science and engineering, this book covers fundamental concepts of vectors and their applications in a single volume. The first unit deals with basic formulation, both conceptual and theoretical. It discusses applications of algebraic operations, Levi-Civita notation, and curvilinear coordinate systems like spherical polar and parabolic systems and structures, and analytical geometry of curves and surfaces. The second unit delves into the algebra of operators and their types and also explains the equivalence between the algebra of vector operators and the algebra of matrices. Formulation of eigen vectors and eigen values of a linear vector operator are elaborated using vector algebra. The third unit deals with vector analysis, discussing vector valued functions of a scalar variable and functions of vector argument (both scalar valued and vector valued), thus covering both the scalar vector fields and vector integration.

Short-Term Prediction of Air Pollution in Macau Using Support Vector Machines

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Chi-Man Vong

2012-01-01

Full Text Available Forecasting of air pollution is a popular and important topic in recent years due to the health impact caused by air pollution. It is necessary to build an early warning system, which provides forecast and also alerts health alarm to local inhabitants by medical practitioners and the local government. Meteorological and pollutions data collected daily at monitoring stations of Macau can be used in this study to build a forecasting system. Support vector machines (SVMs, a novel type of machine learning technique based on statistical learning theory, can be used for regression and time series prediction. SVM is capable of good generalization while the performance of the SVM model is often hinged on the appropriate choice of the kernel.

Wavelength detection in FBG sensor networks using least squares support vector regression

Science.gov (United States)

Chen, Jing; Jiang, Hao; Liu, Tundong; Fu, Xiaoli

2014-04-01

A wavelength detection method for a wavelength division multiplexing (WDM) fiber Bragg grating (FBG) sensor network is proposed based on least squares support vector regression (LS-SVR). As a kind of promising machine learning technique, LS-SVR is employed to approximate the inverse function of the reflection spectrum. The LS-SVR detection model is established from the training samples, and then the Bragg wavelength of each FBG can be directly identified by inputting the measured spectrum into the well-trained model. We also discuss the impact of the sample size and the preprocess of the input spectrum on the performance of the training effectiveness. The results demonstrate that our approach is effective in improving the accuracy for sensor networks with a large number of FBGs.

Support vector machines for nuclear reactor state estimation

Energy Technology Data Exchange (ETDEWEB)

Zavaljevski, N.; Gross, K. C.

2000-02-14

Validation of nuclear power reactor signals is often performed by comparing signal prototypes with the actual reactor signals. The signal prototypes are often computed based on empirical data. The implementation of an estimation algorithm which can make predictions on limited data is an important issue. A new machine learning algorithm called support vector machines (SVMS) recently developed by Vladimir Vapnik and his coworkers enables a high level of generalization with finite high-dimensional data. The improved generalization in comparison with standard methods like neural networks is due mainly to the following characteristics of the method. The input data space is transformed into a high-dimensional feature space using a kernel function, and the learning problem is formulated as a convex quadratic programming problem with a unique solution. In this paper the authors have applied the SVM method for data-based state estimation in nuclear power reactors. In particular, they implemented and tested kernels developed at Argonne National Laboratory for the Multivariate State Estimation Technique (MSET), a nonlinear, nonparametric estimation technique with a wide range of applications in nuclear reactors. The methodology has been applied to three data sets from experimental and commercial nuclear power reactor applications. The results are promising. The combination of MSET kernels with the SVM method has better noise reduction and generalization properties than the standard MSET algorithm.

Support vector machines for nuclear reactor state estimation

International Nuclear Information System (INIS)

Zavaljevski, N.; Gross, K. C.

2000-01-01

Validation of nuclear power reactor signals is often performed by comparing signal prototypes with the actual reactor signals. The signal prototypes are often computed based on empirical data. The implementation of an estimation algorithm which can make predictions on limited data is an important issue. A new machine learning algorithm called support vector machines (SVMS) recently developed by Vladimir Vapnik and his coworkers enables a high level of generalization with finite high-dimensional data. The improved generalization in comparison with standard methods like neural networks is due mainly to the following characteristics of the method. The input data space is transformed into a high-dimensional feature space using a kernel function, and the learning problem is formulated as a convex quadratic programming problem with a unique solution. In this paper the authors have applied the SVM method for data-based state estimation in nuclear power reactors. In particular, they implemented and tested kernels developed at Argonne National Laboratory for the Multivariate State Estimation Technique (MSET), a nonlinear, nonparametric estimation technique with a wide range of applications in nuclear reactors. The methodology has been applied to three data sets from experimental and commercial nuclear power reactor applications. The results are promising. The combination of MSET kernels with the SVM method has better noise reduction and generalization properties than the standard MSET algorithm

Forecasting of Energy Consumption in China Based on Ensemble Empirical Mode Decomposition and Least Squares Support Vector Machine Optimized by Improved Shuffled Frog Leaping Algorithm

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Shuyu Dai

2018-04-01

empirical analysis for energy consumption prediction. Four models, ISFLA-LSSVM, SFLA-LSSVM (Least Squares Support Vector Machine Optimized by Shuffled Frog Leaping Algorithm, LSSVM (Least Squares Support Vector Machine, and BP(Back Propagation neural network (Back Propagation neural network, are selected to compare with the EEMD-ISFLA-LSSVM model based on the evaluation indicators of mean absolute percentage error (MAPE, root mean square error (RMSE, and mean absolute error (MAE, which fully prove the practicability of the EEMD-ISFLA-LSSVM model for energy consumption forecasting in China. Finally, the EEMD-ISFLA-LSSVM model is adopted to forecast the energy consumption in China from 2018 to 2022, and, according to the forecasting results, it can be seen that China’s energy consumption from 2018 to 2022 will have a trend of significant growth.

A support vector machine based test for incongruence between sets of trees in tree space

Science.gov (United States)

2012-01-01

Background The increased use of multi-locus data sets for phylogenetic reconstruction has increased the need to determine whether a set of gene trees significantly deviate from the phylogenetic patterns of other genes. Such unusual gene trees may have been influenced by other evolutionary processes such as selection, gene duplication, or horizontal gene transfer. Results Motivated by this problem we propose a nonparametric goodness-of-fit test for two empirical distributions of gene trees, and we developed the software GeneOut to estimate a p-value for the test. Our approach maps trees into a multi-dimensional vector space and then applies support vector machines (SVMs) to measure the separation between two sets of pre-defined trees. We use a permutation test to assess the significance of the SVM separation. To demonstrate the performance of GeneOut, we applied it to the comparison of gene trees simulated within different species trees across a range of species tree depths. Applied directly to sets of simulated gene trees with large sample sizes, GeneOut was able to detect very small differences between two set of gene trees generated under different species trees. Our statistical test can also include tree reconstruction into its test framework through a variety of phylogenetic optimality criteria. When applied to DNA sequence data simulated from different sets of gene trees, results in the form of receiver operating characteristic (ROC) curves indicated that GeneOut performed well in the detection of differences between sets of trees with different distributions in a multi-dimensional space. Furthermore, it controlled false positive and false negative rates very well, indicating a high degree of accuracy. Conclusions The non-parametric nature of our statistical test provides fast and efficient analyses, and makes it an applicable test for any scenario where evolutionary or other factors can lead to trees with different multi-dimensional distributions. The

Additive survival least square support vector machines: A simulation study and its application to cervical cancer prediction

Science.gov (United States)

Khotimah, Chusnul; Purnami, Santi Wulan; Prastyo, Dedy Dwi; Chosuvivatwong, Virasakdi; Sriplung, Hutcha

2017-11-01

Support Vector Machines (SVMs) has been widely applied for prediction in many fields. Recently, SVM is also developed for survival analysis. In this study, Additive Survival Least Square SVM (A-SURLSSVM) approach is used to analyze cervical cancer dataset and its performance is compared with the Cox model as a benchmark. The comparison is evaluated based on the prognostic index produced: concordance index (c-index), log rank, and hazard ratio. The higher prognostic index represents the better performance of the corresponding methods. This work also applied feature selection to choose important features using backward elimination technique based on the c-index criterion. The cervical cancer dataset consists of 172 patients. The empirical results show that nine out of the twelve features: age at marriage, age of first getting menstruation, age, parity, type of treatment, history of family planning, stadium, long-time of menstruation, and anemia status are selected as relevant features that affect the survival time of cervical cancer patients. In addition, the performance of the proposed method is evaluated through a simulation study with the different number of features and censoring percentages. Two out of three performance measures (c-index and hazard ratio) obtained from A-SURLSSVM consistently yield better results than the ones obtained from Cox model when it is applied on both simulated and cervical cancer data. Moreover, the simulation study showed that A-SURLSSVM performs better when the percentage of censoring data is small.

Investigation of Optimal Integrated Circuit Raster Image Vectorization Method

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Leonas Jasevičius

2011-03-01

Full Text Available Visual analysis of integrated circuit layer requires raster image vectorization stage to extract layer topology data to CAD tools. In this paper vectorization problems of raster IC layer images are presented. Various line extraction from raster images algorithms and their properties are discussed. Optimal raster image vectorization method was developed which allows utilization of common vectorization algorithms to achieve the best possible extracted vector data match with perfect manual vectorization results. To develop the optimal method, vectorized data quality dependence on initial raster image skeleton filter selection was assessed.Article in Lithuanian

Comparison of Support Vector Machine, Neural Network, and CART Algorithms for the Land-Cover Classification Using Limited Training Data Points

Science.gov (United States)

Support vector machine (SVM) was applied for land-cover characterization using MODIS time-series data. Classification performance was examined with respect to training sample size, sample variability, and landscape homogeneity (purity). The results were compared to two convention...

Failure and reliability prediction by support vector machines regression of time series data

International Nuclear Information System (INIS)

Chagas Moura, Marcio das; Zio, Enrico; Lins, Isis Didier; Droguett, Enrique

2011-01-01

Support Vector Machines (SVMs) are kernel-based learning methods, which have been successfully adopted for regression problems. However, their use in reliability applications has not been widely explored. In this paper, a comparative analysis is presented in order to evaluate the SVM effectiveness in forecasting time-to-failure and reliability of engineered components based on time series data. The performance on literature case studies of SVM regression is measured against other advanced learning methods such as the Radial Basis Function, the traditional MultiLayer Perceptron model, Box-Jenkins autoregressive-integrated-moving average and the Infinite Impulse Response Locally Recurrent Neural Networks. The comparison shows that in the analyzed cases, SVM outperforms or is comparable to other techniques. - Highlights: → Realistic modeling of reliability demands complex mathematical formulations. → SVM is proper when the relation input/output is unknown or very costly to be obtained. → Results indicate the potential of SVM for reliability time series prediction. → Reliability estimates support the establishment of adequate maintenance strategies.

A Framework for Diagnosing the Out-of-Control Signals in Multivariate Process Using Optimized Support Vector Machines

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Tai-fu Li

2013-01-01

Full Text Available Multivariate statistical process control is the continuation and development of unitary statistical process control. Most multivariate statistical quality control charts are usually used (in manufacturing and service industries to determine whether a process is performing as intended or if there are some unnatural causes of variation upon an overall statistics. Once the control chart detects out-of-control signals, one difficulty encountered with multivariate control charts is the interpretation of an out-of-control signal. That is, we have to determine whether one or more or a combination of variables is responsible for the abnormal signal. A novel approach for diagnosing the out-of-control signals in the multivariate process is described in this paper. The proposed methodology uses the optimized support vector machines (support vector machine classification based on genetic algorithm to recognize set of subclasses of multivariate abnormal patters, identify the responsible variable(s on the occurrence of abnormal pattern. Multiple sets of experiments are used to verify this model. The performance of the proposed approach demonstrates that this model can accurately classify the source(s of out-of-control signal and even outperforms the conventional multivariate control scheme.

Support vector data description for fusion of multiple health indicators for enhancing gearbox fault diagnosis and prognosis

International Nuclear Information System (INIS)

Wang, Dong; Tse, Peter W; Guo, Wei; Miao, Qiang

2011-01-01

A novel method for enhancing gearbox fault diagnosis and prognosis is developed by fusion of multiple health indicators through support vector data description. First, the Comblet transform is used to identify gear residual error signals from the raw signal. Second, based on the observation of gear residual error signals, a total of 11 gear health indicators are identified, and are categorized into two types of indicators. The first and second types of indicators are for fault diagnosis and prognosis, respectively. The first type has six indicators, which are sensitive to impulsive signals triggered by anomalous impacts. The second type has five indicators, which are suitable for tracking degradation of faults. Third, through the support vector data description, the first six health indicators are fused into type one indicators for fault diagnosis. The remaining five indicators are fused into type two indicators for fault prognosis. Finally, a Gaussian kernel is designed to enhance the performance of type one and two indicators by optimal range of width size. The effectiveness of the proposed method is validated through experiments. The new method has been proven to be superior to methods that use unfused indicators individually

Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines

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Seizi Someya

2010-01-01

Full Text Available Carbohydrate-binding proteins are proteins that can interact with sugar chains but do not modify them. They are involved in many physiological functions, and we have developed a method for predicting them from their amino acid sequences. Our method is based on support vector machines (SVMs. We first clarified the definition of carbohydrate-binding proteins and then constructed positive and negative datasets with which the SVMs were trained. By applying the leave-one-out test to these datasets, our method delivered 0.92 of the area under the receiver operating characteristic (ROC curve. We also examined two amino acid grouping methods that enable effective learning of sequence patterns and evaluated the performance of these methods. When we applied our method in combination with the homology-based prediction method to the annotated human genome database, H-invDB, we found that the true positive rate of prediction was improved.

Identification method for gas-liquid two-phase flow regime based on singular value decomposition and least square support vector machine

International Nuclear Information System (INIS)

Sun Bin; Zhou Yunlong; Zhao Peng; Guan Yuebo

2007-01-01

Aiming at the non-stationary characteristics of differential pressure fluctuation signals of gas-liquid two-phase flow, and the slow convergence of learning and liability of dropping into local minima for BP neural networks, flow regime identification method based on Singular Value Decomposition (SVD) and Least Square Support Vector Machine (LS-SVM) is presented. First of all, the Empirical Mode Decomposition (EMD) method is used to decompose the differential pressure fluctuation signals of gas-liquid two-phase flow into a number of stationary Intrinsic Mode Functions (IMFs) components from which the initial feature vector matrix is formed. By applying the singular vale decomposition technique to the initial feature vector matrixes, the singular values are obtained. Finally, the singular values serve as the flow regime characteristic vector to be LS-SVM classifier and flow regimes are identified by the output of the classifier. The identification result of four typical flow regimes of air-water two-phase flow in horizontal pipe has shown that this method achieves a higher identification rate. (authors)

Modelling daily dissolved oxygen concentration using least square support vector machine, multivariate adaptive regression splines and M5 model tree

Science.gov (United States)

Heddam, Salim; Kisi, Ozgur

2018-04-01

In the present study, three types of artificial intelligence techniques, least square support vector machine (LSSVM), multivariate adaptive regression splines (MARS) and M5 model tree (M5T) are applied for modeling daily dissolved oxygen (DO) concentration using several water quality variables as inputs. The DO concentration and water quality variables data from three stations operated by the United States Geological Survey (USGS) were used for developing the three models. The water quality data selected consisted of daily measured of water temperature (TE, °C), pH (std. unit), specific conductance (SC, μS/cm) and discharge (DI cfs), are used as inputs to the LSSVM, MARS and M5T models. The three models were applied for each station separately and compared to each other. According to the results obtained, it was found that: (i) the DO concentration could be successfully estimated using the three models and (ii) the best model among all others differs from one station to another.

Vision based nutrient deficiency classification in maize plants using multi class support vector machines

Science.gov (United States)

Leena, N.; Saju, K. K.

2018-04-01

Nutritional deficiencies in plants are a major concern for farmers as it affects productivity and thus profit. The work aims to classify nutritional deficiencies in maize plant in a non-destructive mannerusing image processing and machine learning techniques. The colored images of the leaves are analyzed and classified with multi-class support vector machine (SVM) method. Several images of maize leaves with known deficiencies like nitrogen, phosphorous and potassium (NPK) are used to train the SVM classifier prior to the classification of test images. The results show that the method was able to classify and identify nutritional deficiencies.

Using support vector machine to predict beta- and gamma-turns in proteins.

Science.gov (United States)

Hu, Xiuzhen; Li, Qianzhong

2008-09-01

By using the composite vector with increment of diversity, position conservation scoring function, and predictive secondary structures to express the information of sequence, a support vector machine (SVM) algorithm for predicting beta- and gamma-turns in the proteins is proposed. The 426 and 320 nonhomologous protein chains described by Guruprasad and Rajkumar (Guruprasad and Rajkumar J. Biosci 2000, 25,143) are used for training and testing the predictive model of the beta- and gamma-turns, respectively. The overall prediction accuracy and the Matthews correlation coefficient in 7-fold cross-validation are 79.8% and 0.47, respectively, for the beta-turns. The overall prediction accuracy in 5-fold cross-validation is 61.0% for the gamma-turns. These results are significantly higher than the other algorithms in the prediction of beta- and gamma-turns using the same datasets. In addition, the 547 and 823 nonhomologous protein chains described by Fuchs and Alix (Fuchs and Alix Proteins: Struct Funct Bioinform 2005, 59, 828) are used for training and testing the predictive model of the beta- and gamma-turns, and better results are obtained. This algorithm may be helpful to improve the performance of protein turns' prediction. To ensure the ability of the SVM method to correctly classify beta-turn and non-beta-turn (gamma-turn and non-gamma-turn), the receiver operating characteristic threshold independent measure curves are provided. (c) 2008 Wiley Periodicals, Inc.

Support vector machine in machine condition monitoring and fault diagnosis

Science.gov (United States)

Widodo, Achmad; Yang, Bo-Suk

2007-08-01

Recently, the issue of machine condition monitoring and fault diagnosis as a part of maintenance system became global due to the potential advantages to be gained from reduced maintenance costs, improved productivity and increased machine availability. This paper presents a survey of machine condition monitoring and fault diagnosis using support vector machine (SVM). It attempts to summarize and review the recent research and developments of SVM in machine condition monitoring and diagnosis. Numerous methods have been developed based on intelligent systems such as artificial neural network, fuzzy expert system, condition-based reasoning, random forest, etc. However, the use of SVM for machine condition monitoring and fault diagnosis is still rare. SVM has excellent performance in generalization so it can produce high accuracy in classification for machine condition monitoring and diagnosis. Until 2006, the use of SVM in machine condition monitoring and fault diagnosis is tending to develop towards expertise orientation and problem-oriented domain. Finally, the ability to continually change and obtain a novel idea for machine condition monitoring and fault diagnosis using SVM will be future works.

Mixed kernel function support vector regression for global sensitivity analysis

Science.gov (United States)

Cheng, Kai; Lu, Zhenzhou; Wei, Yuhao; Shi, Yan; Zhou, Yicheng

2017-11-01

Global sensitivity analysis (GSA) plays an important role in exploring the respective effects of input variables on an assigned output response. Amongst the wide sensitivity analyses in literature, the Sobol indices have attracted much attention since they can provide accurate information for most models. In this paper, a mixed kernel function (MKF) based support vector regression (SVR) model is employed to evaluate the Sobol indices at low computational cost. By the proposed derivation, the estimation of the Sobol indices can be obtained by post-processing the coefficients of the SVR meta-model. The MKF is constituted by the orthogonal polynomials kernel function and Gaussian radial basis kernel function, thus the MKF possesses both the global characteristic advantage of the polynomials kernel function and the local characteristic advantage of the Gaussian radial basis kernel function. The proposed approach is suitable for high-dimensional and non-linear problems. Performance of the proposed approach is validated by various analytical functions and compared with the popular polynomial chaos expansion (PCE). Results demonstrate that the proposed approach is an efficient method for global sensitivity analysis.

Support Vector Regression and Genetic Algorithm for HVAC Optimal Operation

Directory of Open Access Journals (Sweden)

Ching-Wei Chen

2016-01-01

Full Text Available This study covers records of various parameters affecting the power consumption of air-conditioning systems. Using the Support Vector Machine (SVM, the chiller power consumption model, secondary chilled water pump power consumption model, air handling unit fan power consumption model, and air handling unit load model were established. In addition, it was found that R2 of the models all reached 0.998, and the training time was far shorter than that of the neural network. Through genetic programming, a combination of operating parameters with the least power consumption of air conditioning operation was searched. Moreover, the air handling unit load in line with the air conditioning cooling load was predicted. The experimental results show that for the combination of operating parameters with the least power consumption in line with the cooling load obtained through genetic algorithm search, the power consumption of the air conditioning systems under said combination of operating parameters was reduced by 22% compared to the fixed operating parameters, thus indicating significant energy efficiency.

[Discrimination of types of polyacrylamide based on near infrared spectroscopy coupled with least square support vector machine].

Science.gov (United States)

Zhang, Hong-Guang; Yang, Qin-Min; Lu, Jian-Gang

2014-04-01

In this paper, a novel discriminant methodology based on near infrared spectroscopic analysis technique and least square support vector machine was proposed for rapid and nondestructive discrimination of different types of Polyacrylamide. The diffuse reflectance spectra of samples of Non-ionic Polyacrylamide, Anionic Polyacrylamide and Cationic Polyacrylamide were measured. Then principal component analysis method was applied to reduce the dimension of the spectral data and extract of the principal compnents. The first three principal components were used for cluster analysis of the three different types of Polyacrylamide. Then those principal components were also used as inputs of least square support vector machine model. The optimization of the parameters and the number of principal components used as inputs of least square support vector machine model was performed through cross validation based on grid search. 60 samples of each type of Polyacrylamide were collected. Thus a total of 180 samples were obtained. 135 samples, 45 samples for each type of Polyacrylamide, were randomly split into a training set to build calibration model and the rest 45 samples were used as test set to evaluate the performance of the developed model. In addition, 5 Cationic Polyacrylamide samples and 5 Anionic Polyacrylamide samples adulterated with different proportion of Non-ionic Polyacrylamide were also prepared to show the feasibilty of the proposed method to discriminate the adulterated Polyacrylamide samples. The prediction error threshold for each type of Polyacrylamide was determined by F statistical significance test method based on the prediction error of the training set of corresponding type of Polyacrylamide in cross validation. The discrimination accuracy of the built model was 100% for prediction of the test set. The prediction of the model for the 10 mixing samples was also presented, and all mixing samples were accurately discriminated as adulterated samples. The

Classification of ECG signal with Support Vector Machine Method for Arrhythmia Detection

Science.gov (United States)

Turnip, Arjon; Ilham Rizqywan, M.; Kusumandari, Dwi E.; Turnip, Mardi; Sihombing, Poltak

2018-03-01

An electrocardiogram is a potential bioelectric record that occurs as a result of cardiac activity. QRS Detection with zero crossing calculation is one method that can precisely determine peak R of QRS wave as part of arrhythmia detection. In this paper, two experimental scheme (2 minutes duration with different activities: relaxed and, typing) were conducted. From the two experiments it were obtained: accuracy, sensitivity, and positive predictivity about 100% each for the first experiment and about 79%, 93%, 83% for the second experiment, respectively. Furthermore, the feature set of MIT-BIH arrhythmia using the support vector machine (SVM) method on the WEKA software is evaluated. By combining the available attributes on the WEKA algorithm, the result is constant since all classes of SVM goes to the normal class with average 88.49% accuracy.

Signal Detection for QPSK Based Cognitive Radio Systems using Support Vector Machines

Directory of Open Access Journals (Sweden)

M. T. Mushtaq

2015-04-01

Full Text Available Cognitive radio based network enables opportunistic dynamic spectrum access by sensing, adopting and utilizing the unused portion of licensed spectrum bands. Cognitive radio is intelligent enough to adapt the communication parameters of the unused licensed spectrum. Spectrum sensing is one of the most important tasks of the cognitive radio cycle. In this paper, the auto-correlation function kernel based Support Vector Machine (SVM classifier along with Welch's Periodogram detector is successfully implemented for the detection of four QPSK (Quadrature Phase Shift Keying based signals propagating through an AWGN (Additive White Gaussian Noise channel. It is shown that the combination of statistical signal processing and machine learning concepts improve the spectrum sensing process and spectrum sensing is possible even at low Signal to Noise Ratio (SNR values up to -50 dB.

Enhancing poxvirus vectors vaccine immunogenicity.

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García-Arriaza, Juan; Esteban, Mariano

2014-01-01

Attenuated recombinant poxvirus vectors expressing heterologous antigens from pathogens are currently at various stages in clinical trials with the aim to establish their efficacy. This is because these vectors have shown excellent safety profiles, significant immunogenicity against foreign expressed antigens and are able to induce protective immune responses. In view of the limited efficacy triggered by some poxvirus strains used in clinical trials (i.e, ALVAC in the RV144 phase III clinical trial for HIV), and of the restrictive replication capacity of the highly attenuated vectors like MVA and NYVAC, there is a consensus that further improvements of these vectors should be pursuit. In this review we considered several strategies that are currently being implemented, as well as new approaches, to improve the immunogenicity of the poxvirus vectors. This includes heterologous prime/boost protocols, use of co-stimulatory molecules, deletion of viral immunomodulatory genes still present in the poxvirus genome, enhancing virus promoter strength, enhancing vector replication capacity, optimizing expression of foreign heterologous sequences, and the combined use of adjuvants. An optimized poxvirus vector triggering long-lasting immunity with a high protective efficacy against a selective disease should be sought.

Prediction on sunspot activity based on fuzzy information granulation and support vector machine

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Peng, Lingling; Yan, Haisheng; Yang, Zhigang

2018-04-01

In order to analyze the range of sunspots, a combined prediction method of forecasting the fluctuation range of sunspots based on fuzzy information granulation (FIG) and support vector machine (SVM) was put forward. Firstly, employing the FIG to granulate sample data and extract va)alid information of each window, namely the minimum value, the general average value and the maximum value of each window. Secondly, forecasting model is built respectively with SVM and then cross method is used to optimize these parameters. Finally, the fluctuation range of sunspots is forecasted with the optimized SVM model. Case study demonstrates that the model have high accuracy and can effectively predict the fluctuation of sunspots.

Fault Diagnosis in Condition of Sample Type Incompleteness Using Support Vector Data Description

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Hui Yi

2015-01-01

Full Text Available Faulty samples are much harder to acquire than normal samples, especially in complicated systems. This leads to incompleteness for training sample types and furthermore a decrease of diagnostic accuracy. In this paper, the relationship between sample-type incompleteness and the classifier-based diagnostic accuracy is discussed first. Then, a support vector data description-based approach, which has taken the effects of sample-type incompleteness into consideration, is proposed to refine the construction of fault regions and increase the diagnostic accuracy for the condition of incomplete sample types. The effectiveness of the proposed method was validated on both a Gaussian distributed dataset and a practical dataset. Satisfactory results have been obtained.

Vectoring of parallel synthetic jets

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Berk, Tim; Ganapathisubramani, Bharathram; Gomit, Guillaume

2015-11-01

A pair of parallel synthetic jets can be vectored by applying a phase difference between the two driving signals. The resulting jet can be merged or bifurcated and either vectored towards the actuator leading in phase or the actuator lagging in phase. In the present study, the influence of phase difference and Strouhal number on the vectoring behaviour is examined experimentally. Phase-locked vorticity fields, measured using Particle Image Velocimetry (PIV), are used to track vortex pairs. The physical mechanisms that explain the diversity in vectoring behaviour are observed based on the vortex trajectories. For a fixed phase difference, the vectoring behaviour is shown to be primarily influenced by pinch-off time of vortex rings generated by the synthetic jets. Beyond a certain formation number, the pinch-off timescale becomes invariant. In this region, the vectoring behaviour is determined by the distance between subsequent vortex rings. We acknowledge the financial support from the European Research Council (ERC grant agreement no. 277472).

Identification of NPP accidents using support vector classification

Energy Technology Data Exchange (ETDEWEB)

Back, Ju Hyun; Yoo, Kwae Hwan; Na, Man Gyun [Chosun University, Gwangju (Korea, Republic of)

2016-10-15

In case of the accidents that happens in a nuclear power plants (NPPs), it is very important to identify its accidents for the operator. Therefore, in order to effectively manage the accidents, the initial short time trends of major parameters have to be observed and NPP accidents have to accurately be identified to provide its information to operators and technicians. In this regard, the objective of this study is to identify the accidents when the accidents happen in NPPs. In this study, we applied the support vector classification (SVC) model to classify the initiating events of critical accidents such as loss of coolant accidents (LOCA), total loss of feedwater (TLOFW), station blackout (SBO), and steam generator tube rupture (SGTR). Input variables were used as the initial integral value of the signal measured in the reactor coolant system (RCS), steam generator, and containment vessel after reactor trip. The proposed SVC model is verified by using the simulation data of the modular accident analysis program (MAAP4) code. In this study, the proposed SVC model is verified by using the simulation data of the modular accident analysis program (MAAP4) code. We used an initial integral value of the simulated sensor signals to identify the NPP accidents. The training data was used to train the SVC model. And, the trained model was confirmed using the test data. As a result, it was known that it can accurately classify five events.

Mites as selective fungal carriers in stored grain habitats.

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Hubert, Jan; Stejskal, Václav; Kubátová, Alena; Munzbergová, Zuzana; Vánová, Marie; Zd'árková, Eva

2003-01-01

Mites are well documented as vectors of micromycetes in stored products. Since their vectoring capacity is low due to their small size, they can be serious vectors only where there is selective transfer of a high load of specific fungal species. Therefore the aim of our work was to find out whether the transfer of fungi is selective. Four kinds of stored seeds (wheat, poppy, lettuce, mustard) infested by storage mites were subjected to mycological analysis. We compared the spectrum of micromycete species isolated from different species of mites (Acarus siro, Lepidoglyphus destructor, Tyrophagus putrescentiae, Caloglyphus rhizoglyphoides and Cheyletus malaccensis) and various kinds of stored seeds. Fungi were separately isolated from (a) the surface of mites, (b) the mites' digestive tract (= faeces), and (c) stored seeds and were then cultivated and determined. The fungal transport via mites is selective. This conclusion is supported by (i) lower numbers of isolated fungal species from mites than from seeds; (ii) lower Shannon-Weaver diversity index in the fungal communities isolated from mites than from seeds; (iii) significant effect of mites/seeds as environmental variables on fungal presence in a redundancy analysis (RDA); (iv) differences in composition of isolated fungi between mite species shown by RDA. The results of our work support the hypothesis that mite-fungal interactions are dependent on mite species. The fungi attractive to mites seem to be dispersed more than others. The selectivity of fungal transport via mites enhances their pest importance.

Local Patch Vectors Encoded by Fisher Vectors for Image Classification

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Shuangshuang Chen

2018-02-01

Full Text Available The objective of this work is image classification, whose purpose is to group images into corresponding semantic categories. Four contributions are made as follows: (i For computational simplicity and efficiency, we directly adopt raw image patch vectors as local descriptors encoded by Fisher vector (FV subsequently; (ii For obtaining representative local features within the FV encoding framework, we compare and analyze three typical sampling strategies: random sampling, saliency-based sampling and dense sampling; (iii In order to embed both global and local spatial information into local features, we construct an improved spatial geometry structure which shows good performance; (iv For reducing the storage and CPU costs of high dimensional vectors, we adopt a new feature selection method based on supervised mutual information (MI, which chooses features by an importance sorting algorithm. We report experimental results on dataset STL-10. It shows very promising performance with this simple and efficient framework compared to conventional methods.

Rules for selection of computer system to support customer relationships management

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Dorota Buchnowska

2012-12-01

Full Text Available The number of support systems for business management on the Polish market is increasing. Because of that, enterprises are facing a more and more difficult dilemma: which solution to choose? This paper will present stages of the selection process of applications for customer relationships management support, discuss selection criteria and present a decision making tool for the selection of management support system, allowing for multi-faceted and impartial comparison of business applications.

A support vector machine approach for detection of microcalcifications.

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El-Naqa, Issam; Yang, Yongyi; Wernick, Miles N; Galatsanos, Nikolas P; Nishikawa, Robert M

2002-12-01

In this paper, we investigate an approach based on support vector machines (SVMs) for detection of microcalcification (MC) clusters in digital mammograms, and propose a successive enhancement learning scheme for improved performance. SVM is a machine-learning method, based on the principle of structural risk minimization, which performs well when applied to data outside the training set. We formulate MC detection as a supervised-learning problem and apply SVM to develop the detection algorithm. We use the SVM to detect at each location in the image whether an MC is present or not. We tested the proposed method using a database of 76 clinical mammograms containing 1120 MCs. We use free-response receiver operating characteristic curves to evaluate detection performance, and compare the proposed algorithm with several existing methods. In our experiments, the proposed SVM framework outperformed all the other methods tested. In particular, a sensitivity as high as 94% was achieved by the SVM method at an error rate of one false-positive cluster per image. The ability of SVM to out perform several well-known methods developed for the widely studied problem of MC detection suggests that SVM is a promising technique for object detection in a medical imaging application.

New fuzzy support vector machine for the class imbalance problem in medical datasets classification.

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Gu, Xiaoqing; Ni, Tongguang; Wang, Hongyuan

2014-01-01

In medical datasets classification, support vector machine (SVM) is considered to be one of the most successful methods. However, most of the real-world medical datasets usually contain some outliers/noise and data often have class imbalance problems. In this paper, a fuzzy support machine (FSVM) for the class imbalance problem (called FSVM-CIP) is presented, which can be seen as a modified class of FSVM by extending manifold regularization and assigning two misclassification costs for two classes. The proposed FSVM-CIP can be used to handle the class imbalance problem in the presence of outliers/noise, and enhance the locality maximum margin. Five real-world medical datasets, breast, heart, hepatitis, BUPA liver, and pima diabetes, from the UCI medical database are employed to illustrate the method presented in this paper. Experimental results on these datasets show the outperformed or comparable effectiveness of FSVM-CIP.

New Fuzzy Support Vector Machine for the Class Imbalance Problem in Medical Datasets Classification

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Xiaoqing Gu

2014-01-01

Full Text Available In medical datasets classification, support vector machine (SVM is considered to be one of the most successful methods. However, most of the real-world medical datasets usually contain some outliers/noise and data often have class imbalance problems. In this paper, a fuzzy support machine (FSVM for the class imbalance problem (called FSVM-CIP is presented, which can be seen as a modified class of FSVM by extending manifold regularization and assigning two misclassification costs for two classes. The proposed FSVM-CIP can be used to handle the class imbalance problem in the presence of outliers/noise, and enhance the locality maximum margin. Five real-world medical datasets, breast, heart, hepatitis, BUPA liver, and pima diabetes, from the UCI medical database are employed to illustrate the method presented in this paper. Experimental results on these datasets show the outperformed or comparable effectiveness of FSVM-CIP.

A Numerical Comparison of Rule Ensemble Methods and Support Vector Machines

Energy Technology Data Exchange (ETDEWEB)

Meza, Juan C.; Woods, Mark

2009-12-18

Machine or statistical learning is a growing field that encompasses many scientific problems including estimating parameters from data, identifying risk factors in health studies, image recognition, and finding clusters within datasets, to name just a few examples. Statistical learning can be described as 'learning from data' , with the goal of making a prediction of some outcome of interest. This prediction is usually made on the basis of a computer model that is built using data where the outcomes and a set of features have been previously matched. The computer model is called a learner, hence the name machine learning. In this paper, we present two such algorithms, a support vector machine method and a rule ensemble method. We compared their predictive power on three supernova type 1a data sets provided by the Nearby Supernova Factory and found that while both methods give accuracies of approximately 95%, the rule ensemble method gives much lower false negative rates.

A Structurally Simplified Hybrid Model of Genetic Algorithm and Support Vector Machine for Prediction of Chlorophyll a in Reservoirs

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Jieqiong Su

2015-04-01

Full Text Available With decreasing water availability as a result of climate change and human activities, analysis of the influential factors and variation trends of chlorophyll a has become important to prevent reservoir eutrophication and ensure water supply safety. In this paper, a structurally simplified hybrid model of the genetic algorithm (GA and the support vector machine (SVM was developed for the prediction of monthly concentration of chlorophyll a in the Miyun Reservoir of northern China over the period from 2000 to 2010. Based on the influence factor analysis, the four most relevant influence factors of chlorophyll a (i.e., total phosphorus, total nitrogen, permanganate index, and reservoir storage were extracted using the method of feature selection with the GA, which simplified the model structure, making it more practical and efficient for environmental management. The results showed that the developed simplified GA-SVM model could solve nonlinear problems of complex system, and was suitable for the simulation and prediction of chlorophyll a with better performance in accuracy and efficiency in the Miyun Reservoir.