WorldWideScience

Sample records for sarothrae downy brome

  1. Treating downy brome with herbicide and seeding with native shrubs

    Science.gov (United States)

    Suzanne Owen; Carolyn Sieg

    2011-01-01

    Downy brome or cheatgrass (Bromus tectorum L.) is one of the most invasive and widespread exotic plants in North America. Downy brome can reduce soil nutrient availability, alter native plant community composition, and increase fire frequencies. The effectiveness of Plateau® imazapic herbicide in reducing downy brome cover has been variable, and there is uncertainty...

  2. Downy Brome: evidence for soil engineering

    Science.gov (United States)

    Bromus tectorum L. (downy brome, cheatgrass) is an invasive Eurasian grass largely responsible for landscape level conversion of sagebrush/bunchgrass communities to annual grass dominance. We tested the hypothesis that B. tectorum alters or “engineers” the soil to favor its growth. The hypothesis wa...

  3. Phenology of exotic invasive weeds associated with downy brome

    Science.gov (United States)

    The exotic and highly invasive annual grass downy brome (Bromus tectorum) has invaded millions of hectares of rangelands throughout the Intermountain West. Downy brome increases the chance, rate, season and spread of wildfires, resulting in the destruction of native plant communities and the wildli...

  4. Population level response of downy brome to soil growing medium

    Science.gov (United States)

    Downy brome (Bromus tectorum) is the most ubiquitous exotic invasive weed in the Intermountain West. A major issue for management is the extreme generalist plastic nature of downy brome. We hypothesized that soil growing medium would effect all measured response variables representing some degree of...

  5. Integrated management of downy brome in winter wheat

    Science.gov (United States)

    Downy brome (Bromus tectorum L.), also known as cheatgrass, was introduced into North America from the Mediterranean area of Europe. It was first identified in the eastern United States in 1861, and by 1914 this invasive weed had spread throughout the continent. Downy brome is adapted to climates wi...

  6. Downy brome seed ecology: From flower to emergence

    Science.gov (United States)

    Downy brome (Bromus tectorum) seed is very common in seed banks throughout Great Basin rangelands. Previously, using a soil bioassay method, we tested 100 separate sites within the Great Basin (1000 samples) to measure downy brome seed bank densities. The locations differed greatly by precipitation,...

  7. Studies on the reproductive biology of downy brome (Bromus tectorum)

    International Nuclear Information System (INIS)

    Richardson, J.M.

    1986-01-01

    The ability of downy brome to successfully infest crop lands is partially due to its prolific nature. To better understand its reproductive biology, studies investigating (1) effects of temperature and photoperiod on flowering, (2) prevention of downy brome seed information with herbicides, and (3) effects of drought on reproduction, were conducted. Seedling vernalization was more effective than seed vernalization in promoting downy brome flowering. Vernalizing imbibed downy brome caryopses at 3 C for 0 to 30 days did not induce rapid flowering. Downy brome seedlings were exposed to six photoperiod/temperature treatments. After transfer to long days, plants from the short da/3 C treatment flowered within 30 days. DPX-Y6202 and fluazifop-butyl were tested for their ability to prevent seed formation in downy brome. Fluazifop-butyl prevented seed formation over a wider range of application rates and growth stages than did DPX-Y6202. Seed production was prevented most readily by herbicide applications made early in the reproductive cycle. Translocation of radiolabel was greater with 14 C-fluazifop-butyl than with 14 C-DPX-Y6202, particularly into developing spikelets. Microautoradiographic techniques were used to identify mechanisms involved in the prevention of downy brome seed formation by these herbicides. Tissue localization of both herbicides was similar. The highest concentration of radiolabel was found in developing pollen grains, suggesting that the herbicides prevented seed formation by interrupting pollen development or function. Water stress reduced apparent photosynthesis and increased diffusive resistance of flag leaves

  8. Postharvest tillage reduces Downy Brome infestations in winter wheat

    Science.gov (United States)

    In the Pacific Northwest, downy brome continues to infest winter wheat producing regions especially in low-rainfall areas where the winter wheat-summer fallow rotation is the dominate production system. In Washington, a study was conducted for 2 years at each of two locations in the winter wheat -su...

  9. Returning succession to downy brome dominated rangelands: roadblocks to perennial grass establishment

    Science.gov (United States)

    The most common cause of successional retrogression in the Great Basin is wildfires fueled by downy brome (Bromus tectorum). Downy brome invasion has reduced fire intervals from an estimated 60-100 years down to 5-10 years. Our previous research found that establishment of long-lived perennial grass...

  10. Rehabilitating downy brome (Bromus tectorum)-invaded scrublands using imazapic and seeding with native shrubs

    Science.gov (United States)

    Suzanne M. Owen; Carolyn Hull Sieg; Catherine A. Gehring

    2011-01-01

    Rehabilitation of downy brome-infested shrublands is challenging once this invasive grass dominates native communities. The effectiveness of imazapic herbicide in reducing downy brome cover has been variable, and there is uncertainty about the impacts of imazapic on native species. We used a before-after-control-impact (BACI) field experiment and greenhouse studies to...

  11. Distributional changes and range predictions of downy brome (Bromus tectorum) in Rocky Mountain National Park

    Science.gov (United States)

    Bromberg, J.E.; Kumar, S.; Brown, C.S.; Stohlgren, T.J.

    2011-01-01

    Downy brome (Bromus tectorum L.), an invasive winter annual grass, may be increasing in extent and abundance at high elevations in the western United States. This would pose a great threat to high-elevation plant communities and resources. However, data to track this species in high-elevation environments are limited. To address changes in the distribution and abundance of downy brome and the factors most associated with its occurrence, we used field sampling and statistical methods, and niche modeling. In 2007, we resampled plots from two vegetation surveys in Rocky Mountain National Park for presence and cover of downy brome. One survey was established in 1993 and had been resampled in 1999. The other survey was established in 1996 and had not been resampled until our study. Although not all comparisons between years demonstrated significant changes in downy brome abundance, its mean cover increased nearly fivefold from 1993 (0.7%) to 2007 (3.6%) in one of the two vegetation surveys (P = 0.06). Although the average cover of downy brome within the second survey appeared to be increasing from 1996 to 2007, this slight change from 0.5% to 1.2% was not statistically significant (P = 0.24). Downy brome was present in 50% more plots in 1999 than in 1993 (P = 0.02) in the first survey. In the second survey, downy brome was present in 30% more plots in 2007 than in 1996 (P = 0.08). Maxent, a species-environmental matching model, was generally able to predict occurrences of downy brome, as new locations were in the ranges predicted by earlier generated models. The model found that distance to roads, elevation, and vegetation community influenced the predictions most. The strong response of downy brome to interannual environmental variability makes detecting change challenging, especially with small sample sizes. However, our results suggest that the area in which downy brome occurs is likely increasing in Rocky Mountain National Park through increased frequency and cover

  12. Effects of soil amendments on germination and emergence of downy brome (Bromus tectorum) and Hilaria jamesii

    Science.gov (United States)

    Belnap, J.; Sherrod, S.K.; Miller, M.E.

    2003-01-01

    Downy brome is an introduced Mediterranean annual grass that now dominates millions of hectares of western U.S. rangelands. The presence of this grass has eliminated many native species and accelerated wildfire cycles. The objective of this study was to identify soil additives that allowed germination but inhibited emergence of downy brome, while not affecting germination or emergence of the native perennial grass Hilaria jamesii. On the basis of data from previous studies, we focused on additives that altered the availability of soil nitrogen (N), phosphorus (P), and potassium (K). Most water-soluble treatments inhibited downy brome germination and emergence. We attribute the inhibitory effects of these treatments to excessive salinity and ion-specific effects of the additives themselves. An exception to this was oxalic acid, which showed no effect. Most water-insoluble treatments had no effect in soils with high P but did have an effect in soils with low P. Zeolite was effective regardless of P level, probably due to the high amounts of Na+ it added to the soil solution. Most treatments at higher concentrations resulted in lower downy brome emergence rates in soils currently dominated by downy brome than in uninvaded (but theoretically invadable) Hilaria soils. This difference is possibly attributable to inherent differences in labile soil P. In Stipa soils, where Stipa spp. grow, but which are generally considered to be uninvadable by downy brome, additions of high amounts of N resulted in lower emergence. This may have been an effect of NH4 + interference with uptake of K or other cations or toxicity of high N. We also saw a positive relationship between downy brome emergence and pH in Stipa soils. Hilaria development parameters were not as susceptible to the treatments, regardless of concentration, as downy brome. Our results suggest that there are additions that may be effective management tools for inhibiting downy brome in calcareous soils, including (1

  13. The ghost of outcrossing past in downy brome, an inbreeding annual grass

    Science.gov (United States)

    Susan E. Meyer; Sudeep Ghimire; Samuel Decker; Keith R. Merrill; Craig E. Coleman

    2013-01-01

    We investigated the frequency of outcrossing in downy brome (Bromus tectorum L.), a cleistogamous weedy annual grass, in both common garden and wild populations, using microsatellite and single nucleotide polymorphic (SNP) markers. In the common garden study, 25 lines with strongly contrasting genotypes were planted in close proximity. We fingerprinted 10 seed progeny...

  14. Post-fire Downy Brome (Bromus tectorum) invasion at high elevation in Wyoming

    Science.gov (United States)

    The invasive annual grass downy brome is the most ubiquitous weed in sagebrush systems of western North America. The center of invasion has largely been the Great Basin region, but there is an increasing abundance and distribution in the Rocky Mountain States. We evaluated post-fire vegetation chang...

  15. Soil engineering facilitates Downy brome (Bromus tectorum L.) growth - A case study

    Science.gov (United States)

    Some exotic plants are able to engineer new host soils and engender characteristics that potentially increase their growth. We hypothesized that this positive feedback may be a facet in the competitiveness of the exotic annual grass downy brome. Using rhizotrons in the greenhouse, we compared the gr...

  16. Is Pyrenophora semeniperda the cause of downy brome (Bromus tectorum) die-offs?

    Science.gov (United States)

    Owen W. Baughman; Susan E. Meyer

    2013-01-01

    Downy brome (cheatgrass) is a highly successful, exotic, winter annual invader in semi-arid western North America, forming near-monocultures across many landscapes. A frequent but poorly understood phenomenon in these heavily invaded areas is periodic 'die-off' or complete stand failure. The fungal pathogen Pyrenophora semeniperda is abundant in cheatgrass...

  17. Process-based management approaches for salt desert shrublands dominated by downy brome

    Science.gov (United States)

    Downy brome grass (Bromus tectorum L.) invasion has severely altered key ecological processes such as disturbance regimes, soil nutrient cycling, community assembly, and successional pathways in semi-arid Great Basin salt desert shrublands. Restoring the structure and function of these severly alte...

  18. Downy Brome (Bromus tectorum L. and Broadleaf Weed Control in Winter Wheat with Acetolactate Synthase-Inhibiting Herbicides

    Directory of Open Access Journals (Sweden)

    Patrick W. Geier

    2013-04-01

    Full Text Available A study was conducted for three seasons in northwest Kansas, USA to evaluate acetolactate synthase (ALS-inhibiting herbicides for downy brome (Bromus tectorum L. and winter annual broadleaf weed control in winter wheat. Herbicides included pyroxsulam at 18.4 g ai ha−1, propoxycarbazone-Na at 44 g ai ha−1, premixed propoxycarbazone-Na & mesosulfuron-methyl at 27 g ai ha−1, and sulfosulfuron at 35 g ai ha−1. The herbicides were applied postemergence in fall and spring seasons. Averaged over time of application, no herbicide controlled downy brome more than 78% in any year. When downy brome densities were high, control was less than 60%. Pyroxsulam controlled downy brome greater than or similar to other herbicides tested. Flixweed (Descurainia sophia L., blue mustard [Chorispora tenella (Pallas DC.], and henbit (Lamium amplexicaule L. control did not differ among herbicide treatments. All herbicides tested controlled flixweed and blue mustard at least 87% and 94%, respectively. However, none of the herbicides controlled henbit more than 73%. Fall herbicide applications improved weed control compared to early spring applications; improvement ranged from 3% to 31% depending on the weed species. Henbit control was greatly decreased by delaying herbicide applications until spring compared to fall applications (49% vs. 80% control. Herbicide injury was observed in only two instances. The injury was ≤13% with no difference between herbicides and the injury did not impact final plant height or grain yield.

  19. Comparative effects of glyphosate and atrazine in chloroplast ultrastructure of wheat and downy brome

    International Nuclear Information System (INIS)

    Auge, R.M.; Gealy, D.R.; Ogg, A.G.; Franceschi, V.R.

    1987-01-01

    Developing and mature leaves of winter wheat (Triticum aestivum L. var. Daws) and the weed species downy brome (Bromus tectorum L.) were subjected to 10 mM (foliar application) and 1 mM (root application) herbicide solutions. Glyphosate (N-(phosphonomethyl) glycine) and atrazine (2-chloro-4-(ethyl-amino)-6-(isopropylamino)-s-triazine) were prepared in a carrier composed of 5% soybean oil concentrate, 35% acetone and 60% water. Penetration experiments with 3 H-labelled herbicides assessed what percentage of herbicide entered leaves, and microautoradiography was used to determine qualitatively how much herbicide was present in the sections viewed with TEM. Tissue was excised at 4, 18, 62 and 200 hours, and then either freeze-substituted or fixed chemically. Ultrastructural effects of each herbicide on chloroplasts from leaves of newly-germinated seedlings and of well-tillered plants are depicted and discussed. Temporal differences in response of chloroplasts to each herbicide are noted

  20. Effects of growth regulator herbicide on downy brome (Bromus tectorum) seed production

    Science.gov (United States)

    Previous research showed growth regulator herbicides, such as picloram and aminopyralid, have a sterilizing effect on Japanese brome (Bromus japonicus Thunb.) that can reduce this invasive annual grass’s seed production nearly 100%. This suggests growth regulators might be used to control invasive ...

  1. Allelopathic effects of leaf and corm water extract of saffron (Crocus sativus L. on germination and seedling growth of flixweed (Descurainia sophia L. and downy brome (Bromus tectorum L.

    Directory of Open Access Journals (Sweden)

    Zeinab Alipoor

    2015-04-01

    Full Text Available This study was conducted in two factorial experiment based on completely randomized design with three replications at research laboratory of faculty of agriculture in University of Birjand in 2013. Factors included saffron organs at 2 levels (leaves and corms and water extract concentrations at 5 levels (0, 0.5, 1, 1.5 and 2 percent.The allelopathic effects of saffron leaves and corms on seed germination and seedling growth characteristics of flixweed (Descurainia sophia L. and downy brome (Bromus tectorum L. were studied in two separate experiments. Results indicated lowest seed germination percentage of downy brome and flixweed were observed at concentration of 2% of corm extract (by 65% and 66% reduce compared to control, respectively. The rate of germination of downy brome decreased (by 71% compared to control with concentration of 2% of leaf extract but the rate of germination on flixweed was not significantly affected by extract concentrations. Different concentrations of leaf and corm extracts significantly decreased length and weight of plumule and radicals of two weeds. A logistic model provided a successful estimation of relationship between leaf water extract and germination percentage of two weeds. Based on orthogonal comparison tests, the allelopathic inhibition effects of saffron leaves and corms were more on downy brome and flixweed, respectively.

  2. Large-scale downy brome treatments alter plant-soil relationships and promote perennial grasses in salt desert shrublands

    Science.gov (United States)

    The interrelationship between invasive annual grass abundance and soil resource availability varies spatially and temporally within ecosystems and may be altered by land treatments. We evaluated these relationships in two salt desert landscapes where the local abundance of Bromus tectorum L. (downy...

  3. Low-dose glyphosate does not control annual bromes in the northern Great Plains

    Science.gov (United States)

    Annual bromes (downy brome and Japanese brome) have been shown to decrease perennial grass forage production and alter ecosystem functions in northern Great Plains rangelands. Large-scale chemical control might be a method for increasing rangeland forage production if low application rates confer co...

  4. Enhanced fire-related traits may contribute to the invasiveness of Downy Brome (Bromus tectorum)

    Science.gov (United States)

    Although several invasive species have induced changes to the fire regime of invaded ecosystems, potential intraspecific shifts in fire-related traits that might enhance their invasion success, have never been addressed. We assumed that traits conferring persistence and competitiveness in post-fire ...

  5. Suppression of downy brome by red clover as a cover crop

    Science.gov (United States)

    Weeds are one of the primary obstacles to successful organic farming. Organic producers till to control weeds, but soil health is being damaged by the extensive tillage. Therefore, organic producers are interested in reducing the amount of tillage in their production systems. This study examined t...

  6. Downy brome control and impacts on perennial grass abundance: a systematic review spanning 64 years

    Science.gov (United States)

    Given the high cost of restoration and the underlying assumption that reducing annual grass abundance is a necessary precursor to rangeland restoration in the Intermountain West, USA, we sought to identify limitations and strengths of annual grass and woody plant reduction methods and refine future ...

  7. Grapevine downy mildew control in organic farming.

    Science.gov (United States)

    La Torre, A; Spera, G; Lolletti, D

    2005-01-01

    Cupric products at low dose and alternative compounds have been tested to control the downy mildew in an organic vineyard. It has found that copper compounds control downy mildew in a satisfactory way, reducing, at the same time, the dose of copper metal. The alternative products were not satisfactory to control Plasmopara viticola.

  8. Genetics of resistance against lettuce downy mildew

    Science.gov (United States)

    Lettuce (Lactuca sativa) is one of the most valuable vegetable crops in the U.S. Downy mildew (DM), caused by Bremia lactucae, is the most important foliar disease of lettuce worldwide, which decreases the quality of the marketable portion of the crop. The use of resistant varieties carrying dominan...

  9. Hydrothermal emergence model for ripgut brome (Bromus diandrus)

    Science.gov (United States)

    A model that describes the emergence of ripgut brome (Bromus diandrus) was developed using a two-season data set from a no-tilled field in northeastern Spain. The relationship between cumulative emergence and hydrothermal time (HTT) was described by a sigmoid growth function (Chapman equation). HTT ...

  10. Herbicide spring treatments for the control of brome grasses (Bromus spp. in winter cereals

    Directory of Open Access Journals (Sweden)

    Gehring, Klaus

    2014-02-01

    Full Text Available The efficacy of different ALS-inhibiting herbicides for the control of brome species (Bromus spp. was tested in three field trials in the year 2010 – 2012 in the region of North-West-Bavaria Franken. As a result of the trials the standard herbicide Attribut (Propoxycarbazone was confirmed for the control of brome. In case of infestation with brome and black grass the herbicide Broadway (Pyroxsulam offers a certain control of both problematic grass weeds. This illustrates the high dependency of sufficient brome control in winter cereals on the effectiveness of specific ALS-Inhibitor herbicides. Because of the high risk of herbicide resistance to ACCaseand ALS-inhibiting herbicides in brome, integrated weed management is essential for the sustainable control of brome in winter cereals, respectively winter wheat.

  11. Identification of brome grass infestations in southwest Oklahoma using multi-temporal Landsat imagery

    Science.gov (United States)

    Yan, D.; de Beurs, K.

    2013-12-01

    The extensive infestation of brome grasses (Cheatgrass, Rye brome and Japanese brome) in southwest Oklahoma imposes negative impacts on local economy and ecosystem in terms of decreasing crop and forage production and increasing fire risk. Previously proposed methodologies on brome grass detection are found ill-suitable for southwest Oklahoma as a result of similar responses of background vegetation to inter-annual variability of rainfall. In this study, we aim to identify brome grass infestations by detecting senescent brome grasses using the 2011 Cultivated Land Cover Data Sets and the difference Normalized Difference Infrared Index (NDII) derived from multi-temporal Landsat imagery. Landsat imageries acquired on May 18th and June 10th 2013 by Operational Land Imager and Enhanced Thematic Mapper plus were used. The imagery acquisition dates correspond to the peak growth and senescent time of brome grasses, respectively. The difference NDII was calculated by subtracting the NDII image acquired in May from the June NDII image. Our hypotheses is that senescent brome grasses and crop/pasture fields harvested between the two image acquisition dates can be distinguished from background land cover classes because of their increases in NDII due to decreased water absorption by senescent vegetation in the shortwave infrared region. The Cultivated Land Cover Data Sets were used to further separate senescent brome grass patches from newly harvested crop/pasture fields. Ground truth data collected during field trips in June, July and August of 2013 were used to validate the detection results.

  12. Downy mildews on ornamental plants and their control.

    Science.gov (United States)

    Skrzypczak, C

    2006-01-01

    Among downy mildews occurring on ornamentals in Poland the most dangerous are downy mildew of rose and downy mildew of German statice (Tartarian statice). Downy mildew of rose caused by Peronospora sparsa Berk. is a serious threat to commercial cultivation of cut roses, especially grown under plastic tunnels. Peronospora statices Lobik casual agent of German statice downy mildew can causes the total losses in the second year of statice cultivation more than 70%. Both pathogens are very difficult to control. Effectiveness of azoxystrobine, cymoxanil + famoxate, mancozeb, phosethyl aluminium, phosethyl aluminium + fenamidone, propamocarb in the control of P. sparsa and P. statices was presented. In the control of statice downy mildew none of tested compounds was able to control satisfactory the pathogen. Relatively the best results were obtained with mixture of fenamidone (88 microg/cm3) and phosethyl AL (1334 microg/cm3). In the control of rose downy mildew, the best results were obtained with phosethyl Al at concentration 1600 microg/cm3.

  13. Preserving prairies: Understanding temporal and spatial patterns of invasive annual bromes in the Northern Great Plains

    Science.gov (United States)

    Ashton, Isabel; Symstad, Amy J.; Davis, Christopher; Swanson, Daniel J.

    2016-01-01

    Two Eurasian invasive annual brome grasses, cheatgrass (Bromus tectorum) and Japanese brome (Bromus japonicus), are well known for their impact in steppe ecosystems of the western United States where these grasses have altered fire regimes, reduced native plant diversity and abundance, and degraded wildlife habitat. Annual bromes are also abundant in the grasslands of the Northern Great Plains (NGP), but their impact and ecology are not as well studied. It is unclear whether the lessons learned from the steppe will translate to the mixed-grass prairie where native plant species are adapted to frequent fires and grazing. Developing a successful annual brome management strategy for National Park Service units and other NGP grasslands requires better understanding of (1) the impact of annual bromes on grassland condition; (2) the dynamics of these species through space and time; and (3) the relative importance of environmental factors within and outside managers' control for these spatiotemporal dynamics. Here, we use vegetation monitoring data collected from 1998 to 2015 in 295 sites to relate spatiotemporal variability of annual brome grasses to grassland composition, weather, physical environmental characteristics, and ecological processes (grazing and fire). Concern about the impact of these species in NGP grasslands is warranted, as we found a decline in native species richness with increasing annual brome cover. Annual brome cover generally increased over the time of monitoring but also displayed a 3- to 5-yr cycle of reduction and resurgence. Relative cover of annual bromes in the monitored areas was best predicted by park unit, weather, extant plant community, slope grade, soil composition, and fire history. We found no evidence that grazing reduced annual brome cover, but this may be due to the relatively low grazing pressure in our study. By understanding the consequences and patterns of annual brome invasion, we will be better able to preserve and restore

  14. First record of target-site-resistance of poverty brome (Bromus sterilis to ACCase inhibitors

    Directory of Open Access Journals (Sweden)

    Dicke, Dominik

    2014-02-01

    Full Text Available In 2011 reduced efficacy of grass weed herbicides to poverty brome (Bromus sterilis was observed in oilseed rape on a site in East Hessen. The field was cultivated by using the ploughless tillage system more than 25 years. The site showed high densities of poverty brome (>1000 plants/m² prior to herbicide treatment. Poverty brome seeds were collected in 2012 in the hessian oilseed rape field and from a site in East Westphalia, where poverty brome appeared at low densities (10 plants/m² and was not suspected to resistance. The seeds were sown in to pots and plants cultivated. The plants were treated with two application rates (normal dose, double dose with herbicides of different HRAC-classes. The time of treatment was adjusted to the best expectable treatment/efficiency conditions of the individual herbicides (see chapter 3. Clear differences in efficacy that were caused by herbicide, the origins of poverty brome and the dosages were recorded via visual rating eight weeks after spraying. The herbicides Agil and Focus Ultra were able to control about 90% of the poverty brome plants of the East Westphalia site origin. However, only 20-30% of the Hessian plants could be knocked out by the same herbicides. The ACCase-gene of single powerty brome leaf samples from the hessian site was analyzed after resistance assessment. A molecular genetic analysis on 7 variable positions identified target site resistance: Isoleucine (Ile was replaced by asparagine (Asn at position 2041.

  15. Sonoran Desert winter annuals affected by density of red brome and soil nitrogen

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    Salo, L.F.; McPherson, G.R.; Williams, D.G.

    2005-01-01

    Red brome [Bromus madritensis subsp. rubens (L.) Husn.] is a Mediterranean winter annual grass that has invaded Southwestern USA deserts. This study evaluated interactions among 13 Sonoran Desert annual species at four densities of red brome from 0 to the equivalent of 1200 plants ma??2. We examined these interactions at low (3 I?g) and high (537 I?g NO3a?? g soila??1) nitrogen (N) to evaluate the relative effects of soil N level on survival and growth of native annuals and red brome. Red brome did not affect emergence or survival of native annuals, but significantly reduced growth of natives, raising concerns about effects of this exotic grass on the fecundity of these species. Differences in growth of red brome and of the three dominant non nitrogen-fixing native annuals at the two levels of soil N were similar. Total species biomass of red brome was reduced by 83% at low, compared to high, N levels, whereas that of the three native species was reduced by from 42 to 95%. Mean individual biomass of red brome was reduced by 87% at low, compared to high, N levels, whereas that of the three native species was reduced by from 72 to 89%.

  16. Populations dynamics of red brome (Bromus madritensis subsp. Rubens): Times for concern, opportunities for management

    Science.gov (United States)

    Salo, L.F.

    2004-01-01

    Red brome is a Mediterranean winter annual grass that has invaded south-western USA deserts. Unlike native annuals, it does not maintain a soil seed bank, but exhibits early and uniform germination. Above-average winter precipitation in these regions allows red brome to reach high density and biomass. These are time for concern, as large numbers of easily dispersed seeds increase the likelihood that it may spread into new areas. However, early and uniform germination can also lead to population crashes when drought precludes seed production. Winter droughts dramatically reduce densities of red brome, but provide opportunities for management of this exotic grass.

  17. The sunflower downy mildew pathogen Plasmopara halstedii.

    Science.gov (United States)

    Gascuel, Quentin; Martinez, Yves; Boniface, Marie-Claude; Vear, Felicity; Pichon, Magalie; Godiard, Laurence

    2015-02-01

    Downy mildew of sunflower is caused by Plasmopara halstedii (Farlow) Berlese & de Toni. Plasmopara halstedii is an obligate biotrophic oomycete pathogen that attacks annual Helianthus species and cultivated sunflower, Helianthus annuus. Depending on the sunflower developmental stage at which infection occurs, the characteristic symptoms range from young seedling death, plant dwarfing, leaf bleaching and sporulation to the production of infertile flowers. Downy mildew attacks can have a great economic impact on sunflower crops, and several Pl resistance genes are present in cultivars to protect them against the disease. Nevertheless, some of these resistances have been overcome by the occurrence of novel isolates of the pathogen showing increased virulence. A better characterization of P. halstedii infection and dissemination mechanisms, and the identification of the molecular basis of the interaction with sunflower, is a prerequisite to efficiently fight this pathogen. This review summarizes what is currently known about P. halstedii, provides new insights into its infection cycle on resistant and susceptible sunflower lines using scanning electron and light microscopy imaging, and sheds light on the pathogenicity factors of P. halstedii obtained from recent molecular data. Kingdom Stramenopila; Phylum Oomycota; Class Oomycetes; Order Peronosporales; Family Peronosporaceae; Genus Plasmopara; Species Plasmopara halstedii. Sunflower seedling damping off, dwarfing of the plant, bleaching of leaves, starting from veins, and visible white sporulation, initially on the lower side of cotyledons and leaves. Plasmopara halstedii infection may severely impact sunflower seed yield. In spring, germination of overwintered sexual oospores leads to sunflower root infection. Intercellular hyphae are responsible for systemic plant colonization and the induction of disease symptoms. Under humid and fresh conditions, dissemination structures are produced by the pathogen on all

  18. Sequencing of the Litchi Downy Blight Pathogen Reveals It Is a Phytophthora Species With Downy Mildew-Like Characteristics.

    Science.gov (United States)

    Ye, Wenwu; Wang, Yang; Shen, Danyu; Li, Delong; Pu, Tianhuizi; Jiang, Zide; Zhang, Zhengguang; Zheng, Xiaobo; Tyler, Brett M; Wang, Yuanchao

    2016-07-01

    On the basis of its downy mildew-like morphology, the litchi downy blight pathogen was previously named Peronophythora litchii. Recently, however, it was proposed to transfer this pathogen to Phytophthora clade 4. To better characterize this unusual oomycete species and important fruit pathogen, we obtained the genome sequence of Phytophthora litchii and compared it to those from other oomycete species. P. litchii has a small genome with tightly spaced genes. On the basis of a multilocus phylogenetic analysis, the placement of P. litchii in the genus Phytophthora is strongly supported. Effector proteins predicted included 245 RxLR, 30 necrosis-and-ethylene-inducing protein-like, and 14 crinkler proteins. The typical motifs, phylogenies, and activities of these effectors were typical for a Phytophthora species. However, like the genome features of the analyzed downy mildews, P. litchii exhibited a streamlined genome with a relatively small number of genes in both core and species-specific protein families. The low GC content and slight codon preferences of P. litchii sequences were similar to those of the analyzed downy mildews and a subset of Phytophthora species. Taken together, these observations suggest that P. litchii is a Phytophthora pathogen that is in the process of acquiring downy mildew-like genomic and morphological features. Thus P. litchii may provide a novel model for investigating morphological development and genomic adaptation in oomycete pathogens.

  19. Multiple origins of downy mildews and mito-nuclear discordance within the paraphyletic genus Phytophthora

    Science.gov (United States)

    Choudhury, Robin A.; Mehl, Heather K.; Blomquist, Cheryl L.; McRoberts, Neil; Rizzo, David M.

    2018-01-01

    Phylogenetic relationships between thirteen species of downy mildew and 103 species of Phytophthora (plant-pathogenic oomycetes) were investigated with two nuclear and four mitochondrial loci, using several likelihood-based approaches. Three Phytophthora taxa and all downy mildew taxa were excluded from the previously recognized subgeneric clades of Phytophthora, though all were strongly supported within the paraphyletic genus. Downy mildews appear to be polyphyletic, with graminicolous downy mildews (GDM), brassicolous downy mildews (BDM) and downy mildews with colored conidia (DMCC) forming a clade with the previously unplaced Phytophthora taxon totara; downy mildews with pyriform haustoria (DMPH) were placed in their own clade with affinities to the obligate biotrophic P. cyperi. Results suggest the recognition of four additional clades within Phytophthora, but few relationships between clades could be resolved. Trees containing all twenty extant downy mildew genera were produced by adding partial coverage of seventeen additional downy mildew taxa; these trees supported the monophyly of the BDMs, DMCCs and DMPHs but suggested that the GDMs are paraphyletic in respect to the BDMs or polyphyletic. Incongruence between nuclear-only and mitochondrial-only trees suggests introgression may have occurred between several clades, particularly those containing biotrophs, questioning whether obligate biotrophic parasitism and other traits with polyphyletic distributions arose independently or were horizontally transferred. Phylogenetic approaches may be limited in their ability to resolve some of the complex relationships between the “subgeneric” clades of Phytophthora, which include twenty downy mildew genera and hundreds of species. PMID:29529094

  20. Downy mildew: a serious disease threat to rose health worldwide

    Science.gov (United States)

    Peronospora sparsa is a downy mildew-causing oomycete that can infect roses, blackberries and other members of the rose family. During the last 20 years, this disease has become a serious problem for rose growers in the U.S. and worldwide. While much is known about the disease and its treatment, inc...

  1. Genetic architecture of downy mildew resistance in cucumber

    Science.gov (United States)

    Downy mildew (DM) caused by the obligate oomycete Pseudoperonospora cubensis is the most devastating fungal disease to cucumber production. The molecular mechanism of DM resistance in cucumber is not well understood. We conducted QTL mapping for DM resistances in four cucumber lines including WI7120...

  2. AFLP studies on downy-mildew-resistant and downy-mildew-susceptible genotypes of opium poppy.

    Science.gov (United States)

    Dubey, Mukesh K; Shasany, Ajit K; Dhawan, Om P; Shukla, Ashutosh K; Khanuja, Suman P S

    2010-04-01

    Downy mildew (DM) caused by Peronospora arborescens, is a serious disease in opium poppy (Papaver somniferum), which has a world-wide spread. The establishment of DM-resistant cultivars appears to be a sustainable way to control the In this paper, we present the results of a study aimed at the identification of amplified fragment length polymorphism (AFLP) markers for DM-resistance in opium poppy. Three opium poppy genotypes (inbred over about 10 years): Pps-1 (DM-resistant), Jawahar-16 (DM-susceptible) and H-9 (DM-susceptible) were crossed in a diallel manner and the F(1) progeny along with the parents were subjected to AFLP analysis of chloroplast (cp) and nuclear DNA with seven and nine EcoRI / MseI primer combinations, respectively. cpDNA AFLP analysis identified 24 Pps-1 (DM-resistant)-specific unique fragments that were found to be maternally inherited in both the crosses, Pps-1 x Jawahar-16 and Pps-1 x H-9. In the case of nuclear DNA AFLP analysis, it was found that 17 fragments inherited from Pps-1 were common to the reciprocal crosses of both (i) Pps-1 and Jawahar-16 as well as (ii) Pps-1 and H-9. This is the first molecular investigation on the identification of polymorphism between DM-resistant and DM-susceptible opium poppy genotypes and development of DM-resistant opium poppy genotypespecific AFLP markers. These AFLP markers could be used in future genetic studies for analysis of linkage to the downy mildew resistance trait.

  3. Study of chemisrty and hydrolysates drying parameters of feather-downy raw material

    OpenAIRE

    LISITSYN A.B.; KRIGER O.V.; MITROKHIN P.V.

    2016-01-01

    The article describes chemical and amino acid composition of feather-downy raw material. It determines the mass fraction of crude protein, crude fiber, ash, calcium, phosphorus, sodium in the samples of feather-downy raw material. It is stated that the waste from poultry processing obtained from hens of all the studied species are characterized by a high content of crude protein and low in crude fiber and ash. The most valuable feather-downy raw material regarding protein is waste containing ...

  4. Resistance Against Basil Downy Mildew in Ocimum Species.

    Science.gov (United States)

    Ben-Naim, Yariv; Falach, Lidan; Cohen, Yigal

    2015-06-01

    Downy mildew, caused by the oomycete Peronospora belbahrii, is a devastating disease of sweet basil. In this study, 113 accessions of Ocimum species (83 Plant Introduction entries and 30 commercial entries) were tested for resistance against downy mildew at the seedling stage in growth chambers, and during three seasons, in the field. Most entries belonging to O. basilicum were highly susceptible whereas most entries belonging to O. americanum, O. kilimanadascharicum, O. gratissimum, O. campechianum, or O. tenuiflorum were highly resistant at both the seedling stage and the field. Twenty-seven highly resistant individual plants were each crossed with the susceptible sweet basil 'Peri', and the F1 progeny plants were examined for disease resistance. The F1 plants of two crosses were highly resistant, F1 plants of 24 crosses were moderately resistant, and F1 plants of one cross were susceptible, suggesting full, partial, or no dominance of the resistance gene(s), respectively. These data confirm the feasibility of producing downy mildew-resistant cultivars of sweet basil by crossing with wild Ocimum species.

  5. Evolutionary relationship of alfalfa mosaic virus with cucumber mosaic virus and brome mosaic virus

    OpenAIRE

    Savithri, HS; Murthy, MRN

    1983-01-01

    The amino acid sequences of the non-structural protein (molecular weight 35,000; 3a protein) from three plant viruses - cucumber mosaic, brome mosaic and alfalfa mosaic have been systematically compared using the partial genomic sequences for these three viruses already available. The 3a protein of cucumber mosaic virus has an amino acid sequence homology of 33.7% with the corresponding protein of brome mosaic virus. A similar protein from alfalfa mosaic virus has a homology of 18.2% and 14.2...

  6. Weed-Suppressive Soil Bacteria to Reduce Cheatgrass and Improve Vegetation Diversity on ITD Rights-of-Way

    Science.gov (United States)

    2017-06-01

    Transportation departments are challenged by the invasion of downy brome (cheatgrass) and medusahead. The reduction of downy brome (cheat grass) by Weed Suppressive Bacteria (WSB) Pseudomonas fluorescens strain ACK55 was evaluated on roadsides of I-8...

  7. Spatial variation in seed bank dynamics of two annual brome species in the northern Great Plains

    Science.gov (United States)

    Annual bromes decrease forage production in northern central plains rangelands of North America. Early life history stages are when plants are most failure-prone, yet studying death post-germination and prior to emergence is difficult. In seed bank collections conducted over the course of two growin...

  8. Cheatgrass and red brome; the history and biology of two invaders

    Science.gov (United States)

    Chad R. Reid; Sherel Goodrich; James E. Bowns

    2008-01-01

    In recent history, there has not been a more ecologically important event than the introduction of cheatgrass (Bromus tectorum) and red brome (Bromus rubens) into the Intermountain West. These grasses are very similar in ecology and history and are separated mostly by function of elevation. Both species are from the Mediterranean...

  9. Tubule-forming capacity of the movement proteins of alfalfa mosaic virus and brome mosaic virus

    NARCIS (Netherlands)

    Kasteel, D. T.; van der Wel, N. N.; Jansen, K. A.; Goldbach, R. W.; van Lent, J. W.

    1997-01-01

    The structural phenotype of the movement proteins (MPs) of two representatives of the Bromoviridae, alfalfa mosaic virus (AMV) and brome mosaic virus (BMV), was studied in protoplasts. Immunofluorescence microscopy showed that the MPs of these viruses, for which there has been no evidence of a

  10. a survey of sorghum downy mildew in sorghum in the sudano

    African Journals Online (AJOL)

    DR. AMINU

    Sahel savanna AEZs respectively) indicated that the disease was present only at the seedling stage ... In the southern guinea ... northern Nigeria, sorghum downy mildew in sorghum .... There was a significant (P>0.05) difference in SDM.

  11. Inheritance of downy mildew (Plasmopara viticola) and anthracnose (Sphaceloma ampelinum) resistance in grapevines.

    Science.gov (United States)

    Poolsawat, O; Mahanil, S; Laosuwan, P; Wongkaew, S; Tharapreuksapong, A; Reisch, B I; Tantasawat, P A

    2013-12-13

    Downy mildew (Plasmopara viticola) and anthracnose (Sphaceloma ampelinum) are two of the major diseases of most grapevine (Vitis vinifera L.) cultivars grown in Thailand. Therefore, breeding grapevines for improved downy mildew and anthracnose resistance is crucial. Factorial crosses were made between three downy mildew and/or anthracnose resistant lines ('NY88.0517.01', 'NY65.0550.04', and 'NY65.0551.05'; male parents) and two or three susceptible cultivars of V. vinifera ('Black Queen', 'Carolina Black Rose', and/or 'Italia'; female parents). F1 hybrid seedlings were evaluated for downy mildew and anthracnose resistance using a detached/excised leaf assay. For both diseases, the general combining ability (GCA) variance among male parents was significant, while the variance of GCA among females and the specific combining ability (SCA) variance were not significant, indicating the prevalence of additive over non-additive gene actions. The estimated narrow sense heritabilities of downy mildew and anthracnose resistance were 55.6 and 79.2%, respectively, suggesting that downy mildew/anthracnose resistance gene(s) were highly heritable. The 'Carolina Black Rose x NY65.0550.04' cross combination is recommended for future use.

  12. Red brome (Bromus rubens subsp. madritensis) in North America: Possible modes for early introductions, subsequent spread

    Science.gov (United States)

    Salo, L.F.

    2005-01-01

    Although invasions by exotic plants have increased dramatically as human travel and commerce have increased, few have been comprehensively described. Understanding the patterns of invasive species spread over space and time will help guide management activities and policy. Tracing the earliest appearances of an exotic plant reveals likely sites of introduction, paving the way for genetic studies to quantify founder events and identify potential source populations. Red brome (Bromus madritensis subsp. rubens) is a Mediterranean winter annual grass that has invaded even relatively undisturbed areas of western North America, where it threatens native plant communities. This study used herbarium records and contemporary published accounts to trace the early introductions and subsequent spread of red brome in western North America. The results challenge the most frequently cited sources describing the early history of this grass and suggest three possible modes for early introductions: the California Gold Rush and Central Valley wheat, southern California shipping, and northern California sheep. Subsequent periods of most rapid spread into new areas, from 1930 to 1942, and of greatest spread into new regions, during the past 50 years, coincide with warm Pacific Decadal Oscillation regimes, which are linked to increased winter precipitation in the southwestern USA and northern Mexico. Global environmental change, including increased atmospheric CO2 levels and N deposition, may be contributing to the success of red brome, relative to native species.

  13. Germination timing and rate of locally collected western wheatgrass and smooth brome grass: the role of collection site and light sensitivity along a riparian corridor

    Science.gov (United States)

    The ecological integrity of riparian areas is reduced by biological plant invaders like smooth brome grass (Bromus inermis). Smooth brome actively invades recently disturbed riparian zones by its high seed production and fast seedling establishment. Restoring native perennial grasses to these regio...

  14. Genetic investigation of the nonhost resistance of wild lettuce, Lactuca saligna, to lettuce downy mildew, Bremia lactucae

    NARCIS (Netherlands)

    Boer, den E.

    2014-01-01

    Abstract

    Downy mildew (Bremia lactucae) in lettuce (Lactuca sativa) is a devastating foliar disease causing high losses in lettuce cultivation. The wild lettuce and nonhost species, Lactuca saligna, is absolute resistant to downy mildew and

  15. PATH-ANALYSIS ON SEVERAL CHARACTERS IN POTENTIAL OF CORN PRODUCTION AND RESISTANCE TO DOWNY MILDEW

    Directory of Open Access Journals (Sweden)

    Eko Hary Pudjiwati

    2013-06-01

    Full Text Available This research was aimed at investigating both direct and indirect impacts, and heritability values of characters regarding the potential of corn production and resistance to downy mildew. The result of this investigation is required to determine some criteria taken into account for selection process of downy mildew-resistant corn breeding with high yield. The field experiment was conducted at Research Centre of Agriculture Faculty, Brawijaya University from January to April 2012. Five varieties of hybrid crown and five inbreeding lines were employed, and Randomised Block Design was applied with two replications. As observed, the characters held heritability ranging from average to high, except for heritability of length and width of stomata on the lower surface of the leaves which was categorised as low. Moreover, the stomata density found on lower surface of the leaves was directly and positively correlated to the intensity of attack by downy mildew, which, then, was used as criteria selection in downy mildew-resistance. The intensity of disease and the density of the stomata on lower surface of the leaves accounted for direct and negative correlation to corn production, while the length and diameter of corncob was responsible for direct and positive correlation to corn production. The betterment of corn production can be coped by improving the plant resistance to downy mildew and characters of corncob diameter.

  16. Development of a disease risk prediction model for downy mildew (Peronospora sparsa) in boysenberry.

    Science.gov (United States)

    Kim, Kwang Soo; Beresford, Robert M; Walter, Monika

    2014-01-01

    Downy mildew caused by Peronospora sparsa has resulted in serious production losses in boysenberry (Rubus hybrid), blackberry (Rubus fruticosus), and rose (Rosa sp.) in New Zealand, Mexico, and the United States and the United Kingdom, respectively. Development of a model to predict downy mildew risk would facilitate development and implementation of a disease warning system for efficient fungicide spray application in the crops affected by this disease. Because detailed disease observation data were not available, a two-step approach was applied to develop an empirical risk prediction model for P. sparsa. To identify the weather patterns associated with a high incidence of downy mildew berry infections (dryberry disease) and derive parameters for the empirical model, classification and regression tree (CART) analysis was performed. Then, fuzzy sets were applied to develop a simple model to predict the disease risk based on the parameters derived from the CART analysis. High-risk seasons with a boysenberry downy mildew incidence >10% coincided with months when the number of hours per day with temperature of 15 to 20°C averaged >9.8 over the month and the number of days with rainfall in the month was >38.7%. The Fuzzy Peronospora Sparsa (FPS) model, developed using fuzzy sets, defined relationships among high-risk events, temperature, and rainfall conditions. In a validation study, the FPS model provided correct identification of both seasons with high downy mildew risk for boysenberry, blackberry, and rose and low risk in seasons when no disease was observed. As a result, the FPS model had a significant degree of agreement between predicted and observed risks of downy mildew for those crops (P = 0.002).

  17. Host status of barley to Puccinia coronata from couch grass and P. striiformis from wheat and brome

    NARCIS (Netherlands)

    Niks, R.E.; Heyzen, van S.; Szabo, L.J.; Alemu, S.K.

    2013-01-01

    The pathogenicity and identity was studied of a field sample (PcE) of crown rust fungus Puccinia coronata collected in Hungary on wild couch grass (Elymus repens) and of a field sample (Psb) of stripe rust (P. striiformis) collected in the Netherlands on California brome (Bromus carinatus). We

  18. QTLs for resistance to the false brome rust Puccinia brachypodii in the model grass Brachypodium distachyon L.

    NARCIS (Netherlands)

    Barbieri, M.; Marcel, T.C.; Niks, R.E.; Francia, E.; Pasquariello, M.; Mazzamurro, V.; Garvin, D.F.; Pecchioni, N.

    2012-01-01

    The potential of the model grass Brachypodium distachyon L. (Brachypodium) for studying grass–pathogen interactions is still underexploited. We aimed to identify genomic regions in Brachypodium associated with quantitative resistance to the false brome rust fungus Puccinia brachypodii. The inbred

  19. Host status of barley to Puccinia coronata from couch grass and P. striiformis from wheat and brome

    Science.gov (United States)

    The pathogenicity and identity of a field sample (PcE) of crown rust fungus Puccinia coronata collected in Hungary on wild couch grass (Elytrigia repens) and of a field sample (Psb) of stripe rust (P. striiformis) collected in the Netherlands on California brome (Bromus carinatus) was studied. We fo...

  20. Virus-induced gene silencing in diverse maize lines using the Brome Mosaic virus-based silencing vector

    Science.gov (United States)

    Virus-induced gene silencing (VIGS) is a widely used tool for gene function studies in many plant species, though its use in monocots has been limited. Using a Brome mosaic virus (BMV) vector designed to silence the maize phytoene desaturase gene, a genetically diverse set of maize inbred lines was ...

  1. Host status of false brome grass to the leaf rust fungus Puccinia brachypodii and the stripe rust fungus P. Striiformis

    NARCIS (Netherlands)

    Barbieri, M.; Marcel, T.C.; Niks, R.E.

    2011-01-01

    Purple false brome grass (Brachypodium distachyon) has recently emerged as a model system for temperate grasses and is also a potential model plant to investigate plant interactions with economically important pathogens such as rust fungi. We determined the host status of five Brachypodium species

  2. Genetic dissection of nonhost resistance of wild lettuce, Lactuca saligna, to downy mildew

    NARCIS (Netherlands)

    Zhang, N.

    2008-01-01

    Lettuce downy mildew is the most destructive disease in lettuce (Lactuca spp.) cultivation and is caused by Bremia lactucae. The successful cross between its host L. sativa and the nonhost, L. saligna, and offers a rare chance to study the genetics of the nonhost resistance. From a set of 29

  3. Association of RGA-SSCP markers with resistance to downy mildew and anthracnose in grapevines.

    Science.gov (United States)

    Tantasawat, P A; Poolsawat, O; Prajongjai, T; Chaowiset, W; Tharapreuksapong, A

    2012-07-02

    Downy mildew (Plasmopara viticola) and anthracnose (Sphaceloma ampelinum) are two major diseases that severely affect most grapevine (Vitis vinifera) cultivars grown commercially in Thailand. Progress of conventional breeding programs of grapevine for improved resistance to these diseases can be speeded up by selection of molecular markers associated with resistance traits. We evaluated the association between 13 resistance gene analog (RGA)-single-strand conformation polymorphism (SSCP) markers with resistance to downy mildew and anthracnose in 71 segregating progenies of seven cross combinations between susceptible cultivars and resistant lines. F(1) hybrids from each cross were assessed for resistance to downy mildew and anthracnose (isolates Nk4-1 and Rc2-1) under laboratory conditions. Association of resistance traits with RGA-SSCP markers was evaluated using simple linear regression analysis. Three RGA-SSCP markers were found to be significantly correlated with anthracnose resistance, whereas significant correlation with downy mildew resistance was observed for only one RGA-SSCP marker. These results demonstrate the usefulness of RGA-SSCP markers. Four candidate markers with significant associations to resistance to these two major diseases of grapevine were identified. However, these putative associations between markers and resistance need to be verified with larger segregating populations before they can be used for marker-assisted selection.

  4. Epidemiology and population biology of pseudoperonospora cubensis: a model system for management of downy mildews

    Science.gov (United States)

    The resurgence of cucurbit downy mildew has dramatically influenced production of cucurbits and disease management systems at multiple scales. Long-distance dispersal is a fundamental aspect of epidemic development that influences the timing and extent of disease outbreaks. Dispersal potential of th...

  5. Assessing the vulnerability of sorghum converted lines to anthracnose and downy mildew infection

    Science.gov (United States)

    A total of 59 converted sorghum lines and six checks were evaluated for resistance to two foliar fungal diseases, anthracnose and downy mildew (SDM) in 2008 and 2009 growing seasons at the Texas A&M AgriLife Research Farm, College Station, Texas. In 2008, 23 lines exhibited resistance (35%), 29 sus...

  6. Infection and RNA recombination of Brome mosaic virus in Arabidopsis thaliana

    International Nuclear Information System (INIS)

    Dzianott, Aleksandra; Bujarski, Jozef J.

    2004-01-01

    Ecotypes of Arabidopsis thaliana supported the replication and systemic spread of Brome mosaic virus (BMV) RNAs. Infection was induced either by manual inoculation with viral RNA or by BMV virions, demonstrating that virus disassembly did not prevent infection. When in vitro-transcribed BMV RNAs 1-3 were used, production of subgenomic RNA4 was observed, showing that BMV RNA replication and transcription had occurred. Furthermore, inoculations of the transgenic Arabidopsis line that expressed a suppressor of RNA interference (RNAi) pathway markedly increased the BMV RNA concentrations. Inoculations with designed BMV RNA3 recombination vectors generated both homologous and nonhomologous BMV RNA-RNA recombinants. Thus, all cellular factors essential for BMV RNA replication, transcription, and RNA recombination were shown to be present in Arabidopsis. The current scope of understanding of the model Arabidopsis plant system should facilitate the identification of these factors governing the BMV life cycle

  7. Effects of Heat Shock on Photosynthetic Properties, Antioxidant Enzyme Activity, and Downy Mildew of Cucumber (Cucumis sativus L..

    Directory of Open Access Journals (Sweden)

    Xiaotao Ding

    Full Text Available Heat shock is considered an abiotic stress for plant growth, but the effects of heat shock on physiological responses of cucumber plant leaves with and without downy mildew disease are still not clear. In this study, cucumber seedlings were exposed to heat shock in greenhouses, and the responses of photosynthetic properties, carbohydrate metabolism, antioxidant enzyme activity, osmolytes, and disease severity index of leaves with or without the downy mildew disease were measured. Results showed that heat shock significantly decreased the net photosynthetic rate, actual photochemical efficiency, photochemical quenching coefficient, and starch content. Heat shock caused an increase in the stomatal conductance, transpiration rate, antioxidant enzyme activities, total soluble sugar content, sucrose content, soluble protein content and proline content for both healthy leaves and downy mildew infected leaves. These results demonstrate that heat shock activated the transpiration pathway to protect the photosystem from damage due to excess energy in cucumber leaves. Potential resistance mechanisms of plants exposed to heat stress may involve higher osmotic regulation capacity related to an increase of total accumulations of soluble sugar, proline and soluble protein, as well as higher antioxidant enzymes activity in stressed leaves. Heat shock reduced downy mildew disease severity index by more than 50%, and clearly alleviated downy mildew development in the greenhouses. These findings indicate that cucumber may have a complex physiological change to resist short-term heat shock, and suppress the development of the downy mildew disease.

  8. Genetic dissection of nonhost resistance of wild lettuce, Lactuca saligna, to downy mildew

    OpenAIRE

    Zhang, N.

    2008-01-01

    Lettuce downy mildew is the most destructive disease in lettuce (Lactuca spp.) cultivation and is caused by Bremia lactucae. The successful cross between its host L. sativa and the nonhost, L. saligna, and offers a rare chance to study the genetics of the nonhost resistance. From a set of 29 Backcross Inbred Lines (BILs) representing in total 96% of the L. saligna genome, 15 introgressions were identified to contribute to this resistance at one to four tested lettuce developmental stages and ...

  9. Temperature effect on rose downy mildew development under environmental controlled conditions

    OpenAIRE

    Filgueira D., Juan José; Zambrano, Angélica

    2014-01-01

    The rose downy mildew disease, caused by Peronospora sparsa Berkeley, is one of the most important that affect rose crops in Colombia. To manage this disease, flower growers must deal with high-costs due to the excessive application of fungicides, but without good results. Studies on P. sparsa behavior have shown its narrow relationship with environmental conditions. In this study, the temperature effect was evaluated during the infection and sporulation of P. sparsa in Charlotte leaflets, a ...

  10. Behavior of grape breeding lines with distinct resistance alleles to downy mildew (Plasmopara viticola)

    OpenAIRE

    Sánchez-Mora, Fernando D.; Saifert, Luciano; Zanghelini, Jean; Assumpção, Wilson T.; Guginski-Piva, Cláudia A.; Giacometti, Renan; Novak, Eduardo I.; Klabunde, Gustavo H.; Eibach, Rudolf; Dal Vesco, Lirio; Nodari, Rubens O.; Welter, Leocir J.

    2017-01-01

    Abstract Downy mildew (Plasmopara viticola) is the main grapevine disease in humid regions. In the present investigation, marker-assisted selection (MAS) was used to develop grapevine lines homozygous in loci Rpv1 and Rpv3 for resistance against P. viticola. The experimental populations UFSC-2013-1 (n = 420) and UFSC-2013-2 (n = 237) were obtained by self-pollination of two full-sib plants, originated from a cross between two distinct breeding lines containin...

  11. Behavior of grape breeding lines with distinct resistance alleles to downy mildew (Plasmopara viticola

    Directory of Open Access Journals (Sweden)

    Fernando D. Sánchez-Mora

    2017-04-01

    Full Text Available Downy mildew (Plasmopara viticola is the main grapevine disease in humid regions. In the present investigation, marker-assisted selection (MAS was used to develop grapevine lines homozygous in loci Rpv1 and Rpv3 for resistance against P. viticola. The experimental populations UFSC-2013-1 (n = 420 and UFSC-2013-2 (n = 237 were obtained by self-pollination of two F1 full-sib plants, originated from a cross between two distinct breeding lines containing the downy mildew resistance loci Rpv1 and Rpv3 in heterozygosity. The two experimental populations were genotyped with four microsatellite markers flanking the two downy mildew resistance loci. Among 637 genotyped plants, 300 (48.2% were homozygous for at least one resistance locus and 10 (1.57% were homozygous for both Rpv1 and Rpv3 loci. These 10 plants challenged with P. viticola inoculum showed a clearly enhanced level of resistance. These plants have a great potential as resistance donors in grapevine breeding.

  12. Daytime Solar Heating Controls Downy Mildew Peronospora belbahrii in Sweet Basil.

    Directory of Open Access Journals (Sweden)

    Yigal Cohen

    Full Text Available The biotrophic oomycete Peronospora belbahrii causes a devastating downy mildew disease in sweet basil. Due to the lack of resistant cultivars current control measures rely heavily on fungicides. However, resistance to fungicides and strict regulation on their deployment greatly restrict their use. Here we report on a 'green' method to control this disease. Growth chamber studies showed that P. belbahrii could hardly withstand exposure to high temperatures; exposure of spores, infected leaves, or infected plants to 35-45 °C for 6-9 hours suppressed its survival. Therefore, daytime solar heating was employed in the field to control the downy mildew disease it causes in basil. Covering growth houses of sweet basil already infected with downy mildew with transparent infra-red-impermeable, transparent polyethylene sheets raised the daily maximal temperature during sunny hours by 11-22 °C reaching 40-58 °C (greenhouse effect. Such coverage, applied for a few hours during 1-3 consecutive days, had a detrimental effect on the survival of P. belbahrii: killing the pathogen and/or suppressing disease progress while enhancing growth of the host basil plants.

  13. Downy mildew intensity in tolerant grapes varieties in highlands of southern Brazil

    Directory of Open Access Journals (Sweden)

    de Bem Betina

    2016-01-01

    Full Text Available The aim of this study was to evaluate the different degrees of tolerance to infection by P. viticolaamong three genotypes with constitutive resistance in comparison to susceptible varieties Vitis vinifera. For this purpose two experiments was conducted at EPAGRI Experimental Station, located in the city of São Joaquim, Santa Catarina State, at 2015/16 cycle. In the first experiment on the field, were quantified the incidence and severity and downy mildew intensity was compared by epidemiological variables, on the tolerant varieties Bronner, Regent, Cabernet Cortis and the susceptible Sangiovese. On the second experiment forty leaf discs for the same tolerant genotypes and the susceptible variety Chardonnay were artificially infected with P. viticola sporangia suspension and after seven days of incubation the discs were examined and the degree of infection was estimated based on the intensity of sporangiophore formation. Sangiovese showed highest downy mildew intensity in comparison to the tolerant varieties Cabernet Carbon, Regent and Bronner. Under controlled conditions, the susceptible variety Chardonnay showed higher sporangiophore formation on discs leafs in comparison to the tolerant varieties. All the downy mildew tolerant varieties evaluated showed lower disease development in comparison with V. vinifera varieties.

  14. Monitoring the infective process of the downy mildew causal agent within micropropagated rose plants

    Directory of Open Access Journals (Sweden)

    Sonia Yamile Gómez

    2012-08-01

    Full Text Available Downy mildew in the rose caused by a species of the Peronospora genus is a very restrictive disease for the Colombian greenhouse rose production. The damage observed in the susceptible varieties of commercial rose include symptoms affect young steams and tiny leaves causing reddish and brown spots and defoliation; leading to 10% production losses. The infective behavior of this pathogen was studied with the aim of increasing the knowledge about the biology of the rose downy mildew. The study of the infective process was performed on the Charlotte variety using micropropagated roses inoculated with suspensions of sporangia. A germinal tube was observed during the germination process, it came from a lateral papilla and reached up to 300 microns in length. During this study, the ability of the pathogen to use vascular sieves as communication systems within the plant was determined. Oogonia and antheridia were also observed inside the epidermal cells, and oospores inside the parenchymal tissue close to xylem vessels. To the best of our knowledge, these sexual structures have not been reported on in Colombia before. This study verifies the ability of the downy mildew causal agent to move through the xylem vessels and produce sexual structures, such as oogonia, antheridia and oospores within those tissues.

  15. Analysis of microsatellites from the transcriptome of downy mildew pathogens and their application for characterization of Pseudoperonospora populations

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    Emma C. Wallace

    2017-05-01

    Full Text Available Downy mildew pathogens affect several economically important crops worldwide but, due to their obligate nature, few genetic resources are available for genomic and population analyses. Draft genomes for emergent downy mildew pathogens such as the oomycete Pseudoperonospora cubensis, causal agent of cucurbit downy mildew, have been published and can be used to perform comparative genomic analysis and develop tools such as microsatellites to characterize pathogen population structure. We used bioinformatics to identify 2,738 microsatellites in the P. cubensis predicted transcriptome and evaluate them for transferability to the hop downy mildew pathogen, Pseudoperonospora humuli, since no draft genome is available for this species. We also compared the microsatellite repertoire of P. cubensis to that of the model organism Hyaloperonospora arabidopsidis, which causes downy mildew in Arabidopsis. Although trends in frequency of motif-type were similar, the percentage of SSRs identified from P. cubensis transcripts differed significantly from H. arabidopsidis. The majority of a subset of microsatellites selected for laboratory validation (92% produced a product in P. cubensis isolates, and 83 microsatellites demonstrated transferability to P. humuli. Eleven microsatellites were found to be polymorphic and consistently amplified in P. cubensis isolates. Analysis of Pseudoperonospora isolates from diverse hosts and locations revealed higher diversity in P. cubensis compared to P. humuli isolates. These microsatellites will be useful in efforts to better understand relationships within Pseudoperonospora species and P. cubensis on a population level.

  16. An atomic model of brome mosaic virus using direct electron detection and real-space optimization

    Science.gov (United States)

    Wang, Zhao; Hryc, Corey F.; Bammes, Benjamin; Afonine, Pavel V.; Jakana, Joanita; Chen, Dong-Hua; Liu, Xiangan; Baker, Matthew L.; Kao, Cheng; Ludtke, Steven J.; Schmid, Michael F.; Adams, Paul D.; Chiu, Wah

    2014-09-01

    Advances in electron cryo-microscopy have enabled structure determination of macromolecules at near-atomic resolution. However, structure determination, even using de novo methods, remains susceptible to model bias and overfitting. Here we describe a complete workflow for data acquisition, image processing, all-atom modelling and validation of brome mosaic virus, an RNA virus. Data were collected with a direct electron detector in integrating mode and an exposure beyond the traditional radiation damage limit. The final density map has a resolution of 3.8 Å as assessed by two independent data sets and maps. We used the map to derive an all-atom model with a newly implemented real-space optimization protocol. The validity of the model was verified by its match with the density map and a previous model from X-ray crystallography, as well as the internal consistency of models from independent maps. This study demonstrates a practical approach to obtain a rigorously validated atomic resolution electron cryo-microscopy structure.

  17. Evaluation of the allelopathic potential of water-soluble compounds of barley (Hordeum vulgare L. subsp.vulgare and great brome (Bromus diandrus Roth. using a modified bioassay

    Directory of Open Access Journals (Sweden)

    Bouhaouel, I.

    2016-01-01

    Full Text Available Description of the subject. The present study focuses on the description of the allelopathic interactions between wild and crop species that may occur in a given ecosystem. Objectives. The objective is the evaluation of the allo- and autoinhibition activity of root exudates of barley (Hordeum vulgare L. subsp. vulgare and great brome (Bromus diandrus Roth. seedlings by water-soluble allelochemicals. Method. The allelopathic activities of five Tunisian barley genotypes (modern varieties and landraces, one Saudi Arabian barley landrace and great brome were assessed using a modified laboratory bioassay named "seedling-after-seedling agar method". Results. The barley or the great brome reduced, to a greater extent, the root growth compared to the shoot growth of receiver species. The response of the root system architecture of the great brome towards barley root exudates was studied in detail. All the measured root traits were highly sensitive to the presence of barley. In our conditions, the allelopathic activity of barley root exudates had no apparent relationship with the size of the root and a prominent action of genetic determinants in the allelopathic potential between genotypes is proposed. The alloinhibitory activity of barley or great brome root exudates deferred between the receiver species but was always higher than the autoinhibition potential. The autoinhibition in barley proved to depend on whether the genotypes used as donor and receiver are identical or different, suggesting a specific interaction of allelochemicals with the receiver plant. These molecules seem to be the main actors in the allelopathic barley potential as external factors such variations of pH have no evident relevance in the inhibition process. Conclusions. Barley and great brome exude molecules in their surroundings. This affects the growth of the receiver plants, suggesting that these compounds might contribute to the plant community dynamics.

  18. Simple sequence repeat markers useful for sorghum downy mildew (Peronosclerospora sorghi and related species

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    Odvody Gary N

    2008-11-01

    Full Text Available Abstract Background A recent outbreak of sorghum downy mildew in Texas has led to the discovery of both metalaxyl resistance and a new pathotype in the causal organism, Peronosclerospora sorghi. These observations and the difficulty in resolving among phylogenetically related downy mildew pathogens dramatically point out the need for simply scored markers in order to differentiate among isolates and species, and to study the population structure within these obligate oomycetes. Here we present the initial results from the use of a biotin capture method to discover, clone and develop PCR primers that permit the use of simple sequence repeats (microsatellites to detect differences at the DNA level. Results Among the 55 primers pairs designed from clones from pathotype 3 of P. sorghi, 36 flanked microsatellite loci containing simple repeats, including 28 (55% with dinucleotide repeats and 6 (11% with trinucleotide repeats. A total of 22 microsatellites with CA/AC or GT/TG repeats were the most abundant (40% and GA/AG or CT/TC types contribute 15% in our collection. When used to amplify DNA from 19 isolates from P. sorghi, as well as from 5 related species that cause downy mildew on other hosts, the number of different bands detected for each SSR primer pair using a LI-COR- DNA Analyzer ranged from two to eight. Successful cross-amplification for 12 primer pairs studied in detail using DNA from downy mildews that attack maize (P. maydis & P. philippinensis, sugar cane (P. sacchari, pearl millet (Sclerospora graminicola and rose (Peronospora sparsa indicate that the flanking regions are conserved in all these species. A total of 15 SSR amplicons unique to P. philippinensis (one of the potential threats to US maize production were detected, and these have potential for development of diagnostic tests. A total of 260 alleles were obtained using 54 microsatellites primer combinations, with an average of 4.8 polymorphic markers per SSR across 34

  19. Simple sequence repeat markers useful for sorghum downy mildew (Peronosclerospora sorghi) and related species.

    Science.gov (United States)

    Perumal, Ramasamy; Nimmakayala, Padmavathi; Erattaimuthu, Saradha R; No, Eun-Gyu; Reddy, Umesh K; Prom, Louis K; Odvody, Gary N; Luster, Douglas G; Magill, Clint W

    2008-11-29

    A recent outbreak of sorghum downy mildew in Texas has led to the discovery of both metalaxyl resistance and a new pathotype in the causal organism, Peronosclerospora sorghi. These observations and the difficulty in resolving among phylogenetically related downy mildew pathogens dramatically point out the need for simply scored markers in order to differentiate among isolates and species, and to study the population structure within these obligate oomycetes. Here we present the initial results from the use of a biotin capture method to discover, clone and develop PCR primers that permit the use of simple sequence repeats (microsatellites) to detect differences at the DNA level. Among the 55 primers pairs designed from clones from pathotype 3 of P. sorghi, 36 flanked microsatellite loci containing simple repeats, including 28 (55%) with dinucleotide repeats and 6 (11%) with trinucleotide repeats. A total of 22 microsatellites with CA/AC or GT/TG repeats were the most abundant (40%) and GA/AG or CT/TC types contribute 15% in our collection. When used to amplify DNA from 19 isolates from P. sorghi, as well as from 5 related species that cause downy mildew on other hosts, the number of different bands detected for each SSR primer pair using a LI-COR- DNA Analyzer ranged from two to eight. Successful cross-amplification for 12 primer pairs studied in detail using DNA from downy mildews that attack maize (P. maydis & P. philippinensis), sugar cane (P. sacchari), pearl millet (Sclerospora graminicola) and rose (Peronospora sparsa) indicate that the flanking regions are conserved in all these species. A total of 15 SSR amplicons unique to P. philippinensis (one of the potential threats to US maize production) were detected, and these have potential for development of diagnostic tests. A total of 260 alleles were obtained using 54 microsatellites primer combinations, with an average of 4.8 polymorphic markers per SSR across 34 Peronosclerospora, Peronospora and Sclerospora

  20. Structure and Dynamics of the tRNA-like Structure Domain of Brome Mosaic Virus

    Science.gov (United States)

    Vieweger, Mario; Nesbitt, David

    2014-03-01

    Conformational switching is widely accepted as regulatory mechanism in gene expression in bacterial systems. More recently, similar regulation mechanisms are emerging for viral systems. One of the most abundant and best studied systems is the tRNA-like structure domain that is found in a number of plant viruses across eight genera. In this work, the folding dynamics of the tRNA-like structure domain of Brome Mosaic Virus are investigated using single-molecule Fluorescence Resonance Energy Transfer techniques. In particular, Burst fluorescence is applied to observe metal-ion induced folding in freely diffusing RNA constructs resembling the 3'-terminal 169nt of BMV RNA3. Histograms of EFRET probabilities reveal a complex equilibrium of three distinct populations. A step-wise kinetic model for TLS folding is developed in accord with the evolution of conformational populations and structural information in the literature. In this mechanism, formation of functional TLS domains from unfolded RNAs requires two consecutive steps; 1) hybridization of a long-range stem interaction followed by 2) formation of a 3' pseudoknot. This three-state equilibrium is well described by step-wise dissociation constants K1(328(30) μM) and K2(1092(183) μM) for [Mg2+] and K1(74(6) mM) and K2(243(52) mM) for [Na+]-induced folding. The kinetic model is validated by oligo competition with the STEM interaction. Implications of this conformational folding mechanism are discussed in regards to regulation of virus replication.

  1. Application of ab initio calculations and molecular dynamics to collagen and brome mosaic virus

    Science.gov (United States)

    Eifler, Jay Quinson

    In bio-related research, large proteins are of important interest. We study two such proteins. Collagen is one such protein which forms part of the structural matrix for animals, such as in their bones and teeth. 1JS9 is another protein that is a component of the protein shell of the brome mosaic virus (BMV). And BMV is important for drug delivery and imaging. To better understand the properties of these proteins, quantum mechanically (QM) based results are needed, however computationally feasible methods are also necessary. The Orthogonalized Linear Combination of Atomic Orbitals (OLCAO) method is well-suited for application to such large proteins. However, a new approach to reduce the computational cost is required and this extension to the method we call the Amino-Acid Based Method (AAPM) of OLCAO. The AAPM roughly calculates electronic, self-consistent field (scf) potentials for individual amino-acids with their neighboring amino-acids included as a boundary condition. This allows the costly scf part of the calculation to be skipped out. Additionally, the number of potentials used to describe the how protein i s also minimized. Results for effective charge and bond order are obtained and analyzed for Collagen and preliminary effective charge results are obtained for 1JS9. The effective charge results reproduce those already obtained with other QM based methods but without reduced cost and preserved accuracy that are characteristically different than the formal charges mostly still in use to describe the charge properties of proteins. The bond order results for Collagen nicely reproduce the observed experimentally-derived hydrogen bonding between the individual chains of the collagen triple-helix as well as the observed hydrogen bonding network.

  2. Germination of rye brome (Bromus secalinus L. seeds under simulated drought and different thermal conditions

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    Małgorzata Haliniarz

    2014-01-01

    Full Text Available The aim of the present study was to compare the germination of rye brome (Bromus secalinus L. seeds and the initial growth of seedlings under simulated drought and different thermal conditions. The study included two experiments carried out under laboratory conditions in the spring of 2012. The first experiment involved an evaluation of the speed of germination as well as of the biometric characters and weight of seedlings in polyethylene glycol solutions (PEG 8000 in which the water potential was: -0.2; -0.4; -0.65; -0.9 MPa, and in distilled water as the control treatment. The experiment was conducted at the following temperatures: 25/22oC and 18/14oC day/night, at a relative air humidity of 90%. The other experiment, in which lessive soil was used as a germination substrate, was carried out in a plant growth chamber at two levels of air humidity (55–65% and 85–95% and temperature (22/10oC and 16/5oC. The soil moisture content was determined by the gravimetric method and the water potential corresponding to it was as follows: -0.02, -0.07, -0.16, -0.49, -1.55 MPa. The germination capacity and emergence of Bromus secalinus as well as the weight of sprouts produced were significantly dependent on the water potential of the polyethylene glycol solution and on the soil water potential. The emergence of Bromus secalinus was completely inhibited by reducing the soil water potential below -0.16 MPa (the point of strong growth inhibition. The emergence and biometric characters of rye bro- me seedlings were significantly dependent on temperature and air humidity.

  3. tRNA-like structure regulates translation of Brome mosaic virus RNA.

    Science.gov (United States)

    Barends, Sharief; Rudinger-Thirion, Joëlle; Florentz, Catherine; Giegé, Richard; Pleij, Cornelis W A; Kraal, Barend

    2004-04-01

    For various groups of plant viruses, the genomic RNAs end with a tRNA-like structure (TLS) instead of the 3' poly(A) tail of common mRNAs. The actual function of these TLSs has long been enigmatic. Recently, however, it became clear that for turnip yellow mosaic virus, a tymovirus, the valylated TLS(TYMV) of the single genomic RNA functions as a bait for host ribosomes and directs them to the internal initiation site of translation (with N-terminal valine) of the second open reading frame for the polyprotein. This discovery prompted us to investigate whether the much larger TLSs of a different genus of viruses have a comparable function in translation. Brome mosaic virus (BMV), a bromovirus, has a tripartite RNA genome with a subgenomic RNA4 for coat protein expression. All four RNAs carry a highly conserved and bulky 3' TLS(BMV) (about 200 nucleotides) with determinants for tyrosylation. We discovered TLS(BMV)-catalyzed self-tyrosylation of the tyrosyl-tRNA synthetase but could not clearly detect tyrosine incorporation into any virus-encoded protein. We established that BMV proteins do not need TLS(BMV) tyrosylation for their initiation. However, disruption of the TLSs strongly reduced the translation of genomic RNA1, RNA2, and less strongly, RNA3, whereas coat protein expression from RNA4 remained unaffected. This aberrant translation could be partially restored by providing the TLS(BMV) in trans. Intriguingly, a subdomain of the TLS(BMV) could even almost fully restore translation to the original pattern. We discuss here a model with a central and dominant role for the TLS(BMV) during the BMV infection cycle.

  4. Population structure, genetic diversity and downy mildew resistance among Ocimum species germplasm.

    Science.gov (United States)

    Pyne, Robert M; Honig, Josh A; Vaiciunas, Jennifer; Wyenandt, Christian A; Simon, James E

    2018-04-23

    The basil (Ocimum spp.) genus maintains a rich diversity of phenotypes and aromatic volatiles through natural and artificial outcrossing. Characterization of population structure and genetic diversity among a representative sample of this genus is severely lacking. Absence of such information has slowed breeding efforts and the development of sweet basil (Ocimum basilicum L.) with resistance to the worldwide downy mildew epidemic, caused by the obligate oomycete Peronospora belbahrii. In an effort to improve classification of relationships 20 EST-SSR markers with species-level transferability were developed and used to resolve relationships among a diverse panel of 180 Ocimum spp. accessions with varying response to downy mildew. Results obtained from nested Bayesian model-based clustering, analysis of molecular variance and unweighted pair group method using arithmetic average (UPGMA) analyses were synergized to provide an updated phylogeny of the Ocimum genus. Three (major) and seven (sub) population (cluster) models were identified and well-supported (P UPGMA analysis provided best resolution for the 36-accession, DM resistant k3 cluster with consistently strong bootstrap support. Although the k3 cluster is a rich source of DM resistance introgression of resistance into the commercially important k1 accessions is impeded by reproductive barriers as demonstrated by multiple sterile F1 hybrids. The k2 cluster located between k1 and k3, represents a source of transferrable tolerance evidenced by fertile backcross progeny. The 90-accession k1 cluster was largely susceptible to downy mildew with accession 'MRI' representing the only source of DM resistance. High levels of genetic diversity support the observed phenotypic diversity among Ocimum spp. accessions. EST-SSRs provided a robust evaluation of molecular diversity and can be used for additional studies to increase resolution of genetic relationships in the Ocimum genus. Elucidation of population structure

  5. Draft genome sequence of Sclerospora graminicola, the pearl millet downy mildew pathogen

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    S. Chandra Nayaka

    2017-12-01

    Full Text Available Sclerospora graminicola pathogen is the most important biotic production constraints of pearl millet in India, Africa and other parts of the world. We report a de novo whole genome assembly and analysis of pathotype 1, one of the most virulent pathotypes of S. graminicola from India. The draft genome assembly contained 299,901,251 bp with 65,404 genes. This study may help understand the evolutionary pattern of pathogen and aid elucidation of effector evolution for devising effective durable resistance breeding strategies in pearl millet. Keywords: Sclerospora graminicola, Pathotype 1, Pearl millet, Downy mildew, Whole genome sequence

  6. ENVIRONMENTAL TECHNOLOGY VERIFICATION: JOINT (NSF-EPA) VERIFICATION STATEMENT AND REPORT: BROME AGRI SALES, LTD., MAXIMIZER SEPARATOR, MODEL MAX 1016 - 03/01/WQPC-SWP

    Science.gov (United States)

    Verification testing of the Brome Agri Sales Ltd. Maximizer Separator, Model MAX 1016 (Maximizer) was conducted at the Lake Wheeler Road Field Laboratory Swine Educational Unit in Raleigh, North Carolina. The Maximizer is an inclined screen solids separator that can be used to s...

  7. Using next-generation sequencing to develop molecular diagnostics for Pseudoperonospora cubensis, the cucurbit downy mildew pathogen

    Science.gov (United States)

    Advances in Next Generation Sequencing (NGS) allow for rapid development of genomics resources needed to generate molecular diagnostics assays for infectious agents. NGS approaches are particularly helpful for organisms that cannot be cultured, such as the downy mildew pathogens, a group of biotrop...

  8. Nitric oxide donor seed priming enhances defense responses and induces resistance against pearl millet downy mildew disease

    DEFF Research Database (Denmark)

    Manjunatha, G.; Raj, S. Niranjan; Shetty, Nandini Prasad

    2008-01-01

    experiments with NO donors showed no adverse effect either on the host or pathogen. Aqueous SNP seed treatment with or without polyethylene glycol (PEG) priming was the most effective in inducing the host resistance against downy mildew both under greenhouse and field conditions. Potassium Ferrocyanide...

  9. Resistance to downy mildew in lettuce ‘La Brillante’ is conferred by dm50 gene and multiple QTL

    Science.gov (United States)

    Many cultivars of lettuce (Lactuca sativa L.) are susceptible to downy mildew, a nearly globally ubiquitous disease caused by Bremia lactucae. We previously determined that Batavia type cultivar La Brillante has a high level of field resistance to the disease in California. Testing of a mapping popu...

  10. Transcriptome and Small RNAome Dynamics during a Resistant and Susceptible Interaction between Cucumber and Downy Mildew

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    Alyssa Burkhardt

    2016-03-01

    Full Text Available Cucumber ( L. downy mildew, caused by the obligate oomycete pathogen (Berk. and Curt. Rostov., is the primary factor limiting cucumber production. Although sources of resistance have been identified, such as plant introduction line PI 197088, the genes and processes involved in mediating resistance are still unknown. In the current study, we conducted a comprehensive transcriptome and small RNAome analysis of a resistant (PI 197088 and susceptible (‘Vlaspik’ cucumber during a time course of infection using Illumina sequencing. We identified significantly differentially expressed (DE genes within and between resistant and susceptible cucumber leaves over a time course of infection. Weighted gene correlation network analyses (WGCNA created coexpression modules containing genes with unique expression patterns between Vlaspik and PI 197088. Recurring data trends indicated that resistance to cucumber downy mildew is associated with earlier response to the pathogen, hormone signaling, and regulation of nutrient supply. Candidate resistance genes were identified from multiple transcriptome analyses and literature support. Additionally, parallel sequencing of small RNAs (sRNAs from cucumber and during the infection time course was used to identify and quantify novel and existing microRNA (miRNA in both species. Predicted miRNA targets of cucumber transcripts suggest a complex interconnectedness of gene expression regulation in this plant–pathogen system. This work bioinformatically uncovered gene expression patterns involved in the mediation of or response to resistance. Herein, we provide the foundation for future work to validate candidate resistance genes and miRNA-based regulation proposed in this study.

  11. Nutritional improvement of the rose handling Peronospora Sparsa Berkeley, causal agent of downy mildew

    International Nuclear Information System (INIS)

    Castillo Carlos Fernando; Alvarez Elizabeth; Gomez Eduardo; Llano, German A; Castano Zapata, Jairo

    2010-01-01

    Nutritional solutions, silica, resistance, downy mildew. The downy mildew (Peronospora sparsa), is one of the most important diseases of rose in Colombia, causing losses up to 8%. The objective of this research was to determine a preventive control of the disease, through the improvement of the nutritional balance of the plant. The first phase, involved the effect of different concentrations of N, K, Ca, B and Mn, on the incidence and severity of the disease, and in the second one, the evaluation of the best five treatments of the first phase. The treatments were applied to the varieties Charlotte, Classy and Malibu during 4 weeks, using a splitting plot design with six replications. After one month the plants were inoculated with the fungus at a concentration of 3x104 sporangia mL.The results of the area under the disease progress curve (AUDPC), showed that the plants of Charlotte with 200 ppm of Si had the lowest expression of the disease. In Classy, the best treatment was the standard solution, demonstrating that the effects of the treatments depend of the variety. Charlotte and Malibu showed susceptibility, while Classy, partial resistance to the disease.

  12. GENETIC DIVERSITY OF S3 MAIZE GENOTYPES RESISTANT TO DOWNY MILDEW BASED ON SSR MARKERS

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    Amran Muis

    2016-02-01

    Full Text Available The compulsory requirement for releasing new high yielding maize varieties is resistance to downy mildew. The study aimed to determine the level of homozygosity, genetic diversity, and  genetic distance of 30 S3 genotypes of maize. Number of primers to be used were 30 polymorphic SSR loci which are distributed over the entire maize genomes. The S3 genotypes used were resistant to downy mildew with homozygosity level of >80%, genetic distance between the test and tester strains >0.7, and anthesis silking interval (ASI between inbred lines and tester lines was maximum 3 days. The results showed that 30 SSR primers used were spread evenly across the maize genomes which were manifested in the representation of SSR loci on each chromosome of a total of 10 chromosomes. The levels of polymorphism ranged from 0.13 to 0.78, an average of 0.51, and the number of alleles ranged from 2 to 8 alleles per SSR locus, an average of 4 alleles per SSR locus. The size of nucleotides in each locus also varied from 70 to 553 bp. Cophenetic correlation value (r at 0.67 indicated that the Unweighted Pair-Group Method Using Arithmetic Averages (UPGMA was less reliable for differentiating genotypes in five groups. Of the total of 30 genotypes analyzed, 17 genotypes had homozygosity level of >80% so it can be included in the hybrid assembly program.

  13. Control of downy mildew in greenhouse-grown cucumbers using blue photoselective polyethylene sheets

    International Nuclear Information System (INIS)

    Reuveni, R.; Raviv, M.

    1997-01-01

    Six types of polyethylene sheets with or without a blue pigment, having an absorption peak at the yellow part of the spectrum (580 nm), in combination with three levels of UV-B (280 to 320 nm) absorbance, were investigated for their effects on sporangial production and colonization of Pseudoperonospora cubensis on cucumbers in growth chambers. The effect of these photoselective sheets on the epidemiology of downy mildew in greenhouse-grown cucumbers has been investigated in several locations. The addition of the blue pigment to the films resulted in a significant inhibition of colonization and sporangial production of P. cubensis, whereas filtration of the UV spectrum enhanced the colonization but had no effect on the sporangial production. The appearance of the first symptom-bearing plants was delayed under the blue covers, and consequently, a significant reduction in the disease incidence of downy mildew was recorded under all blue sheets at each corresponding level of UV-B transmittance in five different field experiments through four seasons. Regardless of the differences in disease incidence, there were no significant differences among the yields that were obtained under the various sheets, probably due to the lower photosynthetically active radiation transmissivity of the blue films. The optimal features required for a desirable commercial sheet are discussed

  14. Morphological and molecular characterization of the causal agent of downy mildew on Quinoa (Chenopodium quinoa).

    Science.gov (United States)

    Choi, Young-Joon; Danielsen, Solveig; Lübeck, Mette; Hong, Seung-Beom; Delhey, Rolf; Shin, Hyeon-Dong

    2010-05-01

    Downy mildew is an economically important and widespread disease in quinoa (Chenopodium quinoa) growing areas. Although in many studies Peronospora farinosa is most commonly regarded as the causal agent of the disease, identification and classification of the pathogen remain still uncertain due to its taxonomic confusion. Thirty-six Peronospora isolates from quinoa with different geographic origins including Argentina, Bolivia, Denmark, Ecuador, and Peru were morphologically and molecularly compared with Peronospora species from other Chenopodium species. The morphology of three herbarium specimens was similar to that of P. variabilis, which originated from C. album, characterized by flexuous to curved ultimate branchlets and pedicellated conidia. Phylogenetic analysis based on ITS rDNA sequences also placed the quinoa pathogen within the same clade as P. variabilis. Within the ITS rDNA sequences of the quinoa pathogens, two base substitutions were found, which separated the majority of the Danish isolates from isolates from South America, but no sequence difference was found among the isolates from different cultivars of quinoa. The present results indicate that the pathogen responsible for the quinoa downy mildew is identical to Peronospora variabilis and that it should not be lumped with P. farinosa as claimed previously by most studies.

  15. Fungi colonising the above-ground parts of fodder galega (Galega orientalis Lam. cultivated in pure sowing and mixed with smooth brome-grass (Bromus inermis Leyss.

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    Bożena Cwalina-Ambroziak

    2012-12-01

    Full Text Available Field experiments were carried out in 1999-2001 in the experimental field in Knopin near Dobre Miasto to determine the intensity of fodder galega diseases cultivated in pure sowing and mixed with smooth brome-grass (the Hillstrand and Auld' s modified scale, 1982. The fungi colonising the phyllosphere of fodder galega were analysed in a laboratory (Chruoeciak , 1974. The following symptoms were observed in fodder galega: ascochyta blight (Ascochyta sp., gray mould (Botrytis cinerea and plant wilting (Fusarium oxysporum.. The climatic conditions had an effect on the development of diseases. The greatest intensity of gray mould (Ii = 24.3% and plant wilting (17.9% of plants with the disease symptoms were observed in 2001. Ascochyta blight occurred with the lowest intensity and the highest infection index in 1999 in the cultivation of fodder galega mixed with smooth brome-grass was only 12.1%. The type of cultivation also modified fodder galega disease intensity. Gray mould and plant wilting developed better in pure sowing than in mixed sowing with smooth brome-grass. Throughout the entire experiment period the average infection index was 22.8% and 15.9% of plants with the wilt symptoms. Ascochyta blight found better conditions for development in plants cultivated in a mix with smooth brome-grass (average infection index - 10.0%. The fodder galega phyllosphere provided 4149 fungal isolates represented by 17 species and yeast-like fungi. Yeast-like fungi dominated (75.6% of the total isolates. The following species were less numerous: Botrytis cinerea, Humicola brevis, Acremonium strictum and Cladosporium cladosporioides. From the leaves of fodder galega cultivated in pure sowing, 3.8% more fungi were obtained than from the leaves of plants cultivated with a mix of smooth brome-grass, including more frequently isolated pathogenic fungi representing the genera of Fusarium and the species of Botrytis cinerea.

  16. Downy mildew resistance induced by Trichoderma harzianum T39 in susceptible grapevines partially mimics transcriptional changes of resistant genotypes

    Science.gov (United States)

    2012-01-01

    Background Downy mildew, caused by Plasmopara viticola, is one of the most severe diseases of grapevine and is commonly controlled by fungicide treatments. The beneficial microorganism Trichoderma harzianum T39 (T39) can induce resistance to downy mildew, although the molecular events associated with this process have not yet been elucidated in grapevine. A next generation RNA sequencing (RNA-Seq) approach was used to study global transcriptional changes associated with resistance induced by T39 in Vitis vinifera Pinot Noir leaves. The long-term aim was to develop strategies to optimize the use of this agent for downy mildew control. Results More than 14.8 million paired-end reads were obtained for each biological replicate of T39-treated and control leaf samples collected before and 24 h after P. viticola inoculation. RNA-Seq analysis resulted in the identification of 7,024 differentially expressed genes, highlighting the complex transcriptional reprogramming of grapevine leaves during resistance induction and in response to pathogen inoculation. Our data show that T39 has a dual effect: it directly modulates genes related to the microbial recognition machinery, and it enhances the expression of defence-related processes after pathogen inoculation. Whereas several genes were commonly affected by P. viticola in control and T39-treated plants, opposing modulation of genes related to responses to stress and protein metabolism was found. T39-induced resistance partially inhibited some disease-related processes and specifically activated defence responses after P. viticola inoculation, causing a significant reduction of downy mildew symptoms. Conclusions The global transcriptional analysis revealed that defence processes known to be implicated in the reaction of resistant genotypes to downy mildew were partially activated by T39-induced resistance in susceptible grapevines. Genes identified in this work are an important source of markers for selecting novel

  17. RESEARCHES CONCERNING THE EFFECT OF SOME BIOLOGICALLY-ACTIVE PRODUCTS ON FORAGE BIOMASS YIELD IN SMOOTH BROME

    Directory of Open Access Journals (Sweden)

    I. PET

    2008-05-01

    Full Text Available Vegetal biostimulants are organic products (natural or synthesized that exert upon plant growth an action similar to the phytohormones’ one, when they are applied in small amounts, in certain stages of plant development. Biostimulants change organisms or organs’ development, nutrition or resistance, under various stress conditions, by inducing changes into the vital processes leading to the improvement of crop quality and quantity, to a better and more operative mechanical harvesting and to an improvement in the agricultural products’ preservation. The application of biologically-active products in the smooth brome crop determined growth of the dry matter yield of up to 1.11 t/ha depending on the product used, and the foliar surface index increased in the variants with application of biologically-active products with up to 1.16 m2SA/m2 land, compared to the control variant.

  18. RESEARCHES REGARDING THE EFFECT OF SOME BIOLOGICALLY ACTIVE PRODUCTS UPON THE GERMINATION CAPACITIES OF SMOOTH BROME SEEDS

    Directory of Open Access Journals (Sweden)

    I. PET

    2007-05-01

    Full Text Available The carrying out of uniform forage crops represents an important technological loop for all agricultural species. The uniformity of these crops is caused especially by seed germination capacity, respectively by plant emergence capacity, depending upon the climatic and technological conditions. With regards to the researches carried out in this direction, we present here the influence exerted by some biologically-active products, used through extra-root application during plant vegetation period, upon seeds submitted to germination. The observations performed on smooth brome seeds have led to the conclusion that the per cent of germinated seeds ranges from 82%, in the untreated control variant, to 87.67% in the variant treated with the product Stimupro.

  19. Effects of actonomycin D and ultraviolet irradiation on multiplication of brome mosaic virus in host and non-host cells

    International Nuclear Information System (INIS)

    Maekawa, K.; Furusawa, I.; Okuno, T.

    1981-01-01

    The modes of multiplication of brome mosaic virus (BMV) were compared in protoplasts isolated from host and non-host plants. BMV actively multiplied in the leaves and isolated mesophyll protoplasts of barley, a host of BMV. BMV multiplication in barley protoplasts was inhibited by addition of actinomycin D immediately after inoculation or by u.v. irradiation of the protoplasts before inoculation. In contrast, although BMV could not multiply in leaves of radish and turnip (non-hosts for BMV) it multiplied at a low level in protoplasts isolated from these two plant species. Moreover, u.v. irradiation, or the addition of actinomycin D, enhanced multiplication of BMV in radish and turnip protoplasts. These results suggest that (i) in the host cells replication of BMV is dependent on cellular metabolism of nucleic acid and protein, and (ii) in the non-host cells a substance(s) inhibitory to replication of BMV is synthesized. (author)

  20. Packaging and structural phenotype of brome mosaic virus capsid protein with altered N-terminal β-hexamer structure

    International Nuclear Information System (INIS)

    Wispelaere, Melissanne de; Chaturvedi, Sonali; Wilkens, Stephan; Rao, A.L.N.

    2011-01-01

    The first 45 amino acid region of brome mosaic virus (BMV) capsid protein (CP) contains RNA binding and structural domains that are implicated in the assembly of infectious virions. One such important structural domain encompassing amino acids 28 QPVIV 32 , highly conserved between BMV and cowpea chlorotic mottle virus (CCMV), exhibits a β-hexamer structure. In this study we report that alteration of the β-hexamer structure by mutating 28 QPVIV 32 to 28 AAAAA 32 had no effect either on symptom phenotype, local and systemic movement in Chenopodium quinoa and RNA profile of in vivo assembled virions. However, sensitivity to RNase and assembly phenotypes distinguished virions assembled with CP subunits having β-hexamer from those of wild type. A comparison of 3-D models obtained by cryo electron microscopy revealed overall similar structural features for wild type and mutant virions, with small but significant differences near the 3-fold axes of symmetry.

  1. White blister rusts and downy mildews from bajaur agency fata, with some new records from pakistan

    International Nuclear Information System (INIS)

    Haq, M.A.; Shahzad, S.

    2015-01-01

    In a species diversity study of Oomycyctes of Bajaur Agency FATA, Pakistan, infection of white blister rusts and downy mildews recorded on three cultivated and four wild plants. Capsella bursa-pastoris showed mixed infection of Albugo candida and Hyaloperonospora parasitica (syn: Peronospora parasitica). Similarly, A. candida and H. brassicae (syn: P. brassicae) parasitized Brassica campestris. Wilsoniana portulacae (syn: Albugo portulacae) and W. occidentalis com. nov. (syn: Albugo occidentalis) recovered from Portulaca oleracea and Spinacia oleracea, respectively. Bremia taraxaci, B. sonchicola and B. saussureae recorded on Taraxicum officinale, Sonchus sp., and Saussurea sp., respectively. All these obligate parasites are new records from Bajaur Agency, while H. parasitica, W. occidentalis, B. taraxaci, and B. saussureae on the mentioned hosts are new records from Pakistan. (author)

  2. Mutation breeding for resistance to downy mildew and ergot in Pennisetum and to Ascochyta in chickpea

    International Nuclear Information System (INIS)

    Murty, B.R.

    1976-01-01

    The mutational rectification of the susceptible male steriles of otherwise food yield, and the pollen parents in pearl millet of the released hybrids has been completed successfully. The reconstituted hybrids were tested in National Coordination trials and one of them (NHB5) has been released for All-India cultivation during 1975. They were also tested in more than 2000 trials all over India in farmers' fields. The yield level of the released hybrid (NHB5) based on trials during the past four seasons is 19.2 Q/ha in 232 trials as compared to 14.5 Q/ha of HB-3 (old) based on 221 trials. Biochemical analysis of seedlings of the mutant male steriles resistant to downy mildew and their normal counterparts indicated larger peroxidase activity of high electrophoretic mobility in the resistant ones. In the trials of the reconstituted hybrids along with their normal counterparts the new hybrids proved at least as good in yield even in the absence of the disease in virulent form. Mutational rectification of the male sterile lines and pollen parents could be shown to provide resistance with wide adaptation. Nearly 400 tons of hybrid seed from mutational rectified parents has replaced the earlier hybrids and will cover an area of 80,000 ha in 1976 alone. The low incidence of downy mildew in the male sterile developed from the mutation breeding is likely to be horizontal resistance of greater stability. The M 2 generation of chickpea showed appropriate skewed distribution of means for several of the 17 characters studied, including flowering time and yield

  3. Computer Vision for High-Throughput Quantitative Phenotyping: A Case Study of Grapevine Downy Mildew Sporulation and Leaf Trichomes.

    Science.gov (United States)

    Divilov, Konstantin; Wiesner-Hanks, Tyr; Barba, Paola; Cadle-Davidson, Lance; Reisch, Bruce I

    2017-12-01

    Quantitative phenotyping of downy mildew sporulation is frequently used in plant breeding and genetic studies, as well as in studies focused on pathogen biology such as chemical efficacy trials. In these scenarios, phenotyping a large number of genotypes or treatments can be advantageous but is often limited by time and cost. We present a novel computational pipeline dedicated to estimating the percent area of downy mildew sporulation from images of inoculated grapevine leaf discs in a manner that is time and cost efficient. The pipeline was tested on images from leaf disc assay experiments involving two F 1 grapevine families, one that had glabrous leaves (Vitis rupestris B38 × 'Horizon' [RH]) and another that had leaf trichomes (Horizon × V. cinerea B9 [HC]). Correlations between computer vision and manual visual ratings reached 0.89 in the RH family and 0.43 in the HC family. Additionally, we were able to use the computer vision system prior to sporulation to measure the percent leaf trichome area. We estimate that an experienced rater scoring sporulation would spend at least 90% less time using the computer vision system compared with the manual visual method. This will allow more treatments to be phenotyped in order to better understand the genetic architecture of downy mildew resistance and of leaf trichome density. We anticipate that this computer vision system will find applications in other pathosystems or traits where responses can be imaged with sufficient contrast from the background.

  4. Proteomic analysis of grapevine resistance induced by Trichoderma harzianum T39 reveals specific defence pathways activated against downy mildew

    Science.gov (United States)

    Perazzolli, Michele

    2012-01-01

    Downy mildew is caused by the oomycete Plasmopara viticola and is one of the most serious diseases of grapevine. The beneficial microorganism Trichoderma harzianum T39 (T39) has previously been shown to induce plant-mediated resistance and to reduce the severity of downy mildew in susceptible grapevines. In order to better understand the cellular processes associated with T39-induced resistance, the proteomic and histochemical changes activated by T39 in grapevine were investigated before and 1 day after P. viticola inoculation. A comprehensive proteomic analysis of T39-induced resistance in grapevine was performed using an eight-plex iTRAQ protocol, resulting in the identification and quantification of a total of 800 proteins. Most of the proteins directly affected by T39 were found to be involved in signal transduction, indicating activation of a complete microbial recognition machinery. Moreover, T39-induced resistance was associated with rapid accumulation of reactive oxygen species and callose at infection sites, as well as changes in abundance of proteins involved in response to stress and redox balance, indicating an active defence response to downy mildew. On the other hand, proteins affected by P. viticola in control plants mainly decreased in abundance, possibly reflecting the establishment of a compatible interaction. Finally, the high-throughput iTRAQ protocol allowed de novo peptide sequencing, which will be used to improve annotation of the Vitis vinifera cv. Pinot Noir proteome. PMID:23105132

  5. Classification of images of wheat, ryegrass and brome grass species at early growth stages using principal component analysis

    Directory of Open Access Journals (Sweden)

    Golzarian Mahmood R

    2011-09-01

    Full Text Available Abstract Wheat is one of the most important crops in Australia, and the identification of young plants is an important step towards developing an automated system for monitoring crop establishment and also for differentiating crop from weeds. In this paper, a framework to differentiate early narrow-leaf wheat from two common weeds from their digital images is developed. A combination of colour, texture and shape features is used. These features are reduced to three descriptors using Principal Component Analysis. The three components provide an effective and significant means for distinguishing the three grasses. Further analysis enables threshold levels to be set for the discrimination of the plant species. The PCA model was evaluated on an independent data set of plants and the results show accuracy of 88% and 85% in the differentiation of ryegrass and brome grass from wheat, respectively. The outcomes of this study can be integrated into new knowledge in developing computer vision systems used in automated weed management.

  6. Intermolecular RNA Recombination Occurs at Different Frequencies in Alternate Forms of Brome Mosaic Virus RNA Replication Compartments

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    Hernan Garcia-Ruiz

    2018-03-01

    Full Text Available Positive-strand RNA viruses replicate their genomes in membrane-bound replication compartments. Brome mosaic virus (BMV replicates in vesicular invaginations of the endoplasmic reticulum membrane. BMV has served as a productive model system to study processes like virus-host interactions, RNA replication and recombination. Here we present multiple lines of evidence showing that the structure of the viral RNA replication compartments plays a fundamental role and that recruitment of parental RNAs to a common replication compartment is a limiting step in intermolecular RNA recombination. We show that a previously defined requirement for an RNA recruitment element on both parental RNAs is not to function as a preferred crossover site, but in order for individual RNAs to be recruited into the replication compartments. Moreover, modulating the form of the replication compartments from spherular vesicles (spherules to more expansive membrane layers increased intermolecular RNA recombination frequency by 200- to 1000-fold. We propose that intermolecular RNA recombination requires parental RNAs to be recruited into replication compartments as monomers, and that recruitment of multiple RNAs into a contiguous space is much more common for layers than for spherules. These results could explain differences in recombination frequencies between viruses that replicate in association with smaller spherules versus larger double-membrane vesicles and convoluted membranes.

  7. RESEARCHES CONCERNING THE ECONOMIC EFFICIENCY ACHIEVED SUCCESSIVE TO THE APPLICATION OF BIOLOGICALLY-ACTIVE PRODUCTS IN SMOOTH BROME CROP

    Directory of Open Access Journals (Sweden)

    ELENA PEł

    2008-05-01

    Full Text Available Within any branch of material production, the supervision of the economic effects caused by the applied technologies is an essential requirement. Not only related to the productive activity, but also related to scientific research, designing and other fields of activity, the final goal is represented by the achievement of immediate or far off economic effects. The introduction and generalization into production of the newest technologies of forage production must rely upon calculations of economic efficiency, too. The objective of these calculations is to offer to any producer the possibility to choose among the optimal technologic variants, with great productions per surface unit, of high quality and low costs. The calculations of economic efficiency were carried out during the three years of experimentation. The economic efficiency obtained after the application of biostimulants in smooth brome during the first year of production is expressed through the achievement of a profit per surface unit of 75.85 – 127.00 €/ha. Successive to the calculations of economic efficiency, during the second year of production, the profit per surface unit recorded values between 79.10 – 153.10 €/ha depending upon the applied biostimulant, and during the third year of production the profit obtained per surface unit was 211.05 – 270.70 €/ha.

  8. Small angle scattering study of the structure and organization of RNA and protein in Brome Mosaic Virus (BMV)

    Science.gov (United States)

    Das, Narayan C.; Warren, Garfield T.; Cheng, Si; Kao, C. Cheng; Ni, Peng; Dragnea, Bogdan; Sokol, Paul E.

    2012-02-01

    Brome mosaic virus (BMV) is a small icosahedral of the alpha virus-like superfamily of RNA with a segmented positive-strand RNA genome and a mean diameter ˜ 268å that offers high levels of RNA synthesis and virus production in plants. BMV also tightly regulates the packaging of its four RNAs (RNA1 through RNA4) into three separate particles; RNA1 and RNA2 are encapsidated separately while one copy each of RNA3 and RNA4 are normally packaged together. Small angle neutron scattering (SANS) and small angle X-ray scattering (SAXS) were applied to study the size, shape and protein-RNA organization of BMV. D2O/H2O mixture was used to enhance contrast in SANS measurement. The radial distribution of BMV from the Fourier transform of scattering spectrum gives a clear indication of RNA packing, and distribution and their structure in the BMV. The result reveals that the virus is about 266 å in diameter and is composed of RNA inside the virion coated with a protein shell.

  9. Host-Induced Gene Silencing of Rice Blast Fungus Magnaporthe oryzae Pathogenicity Genes Mediated by the Brome Mosaic Virus.

    Science.gov (United States)

    Zhu, Lin; Zhu, Jian; Liu, Zhixue; Wang, Zhengyi; Zhou, Cheng; Wang, Hong

    2017-09-26

    Magnaporthe oryzae is a devastating plant pathogen, which has a detrimental impact on rice production worldwide. Despite its agronomical importance, some newly-emerging pathotypes often overcome race-specific disease resistance rapidly. It is thus desirable to develop a novel strategy for the long-lasting resistance of rice plants to ever-changing fungal pathogens. Brome mosaic virus (BMV)-induced RNA interference (RNAi) has emerged as a useful tool to study host-resistance genes for rice blast protection. Planta-generated silencing of targeted genes inside biotrophic pathogens can be achieved by expression of M. oryzae -derived gene fragments in the BMV-mediated gene silencing system, a technique termed host-induced gene silencing (HIGS). In this study, the effectiveness of BMV-mediated HIGS in M. oryzae was examined by targeting three predicted pathogenicity genes, MoABC1, MoMAC1 and MoPMK1 . Systemic generation of fungal gene-specific small interfering RNA (siRNA) molecules induced by inoculation of BMV viral vectors inhibited disease development and reduced the transcription of targeted fungal genes after subsequent M. oryzae inoculation. Combined introduction of fungal gene sequences in sense and antisense orientation mediated by the BMV silencing vectors significantly enhanced the efficiency of this host-generated trans-specific RNAi, implying that these fungal genes played crucial roles in pathogenicity. Collectively, our results indicated that BMV-HIGS system was a great strategy for protecting host plants against the invasion of pathogenic fungi.

  10. Nutritional improvement of the rose handling Peronospora Sparsa Berkeley, causal agent of downy mildew

    International Nuclear Information System (INIS)

    Castillo, Carlos Fernando; Alvarez, Elizabeth; Gomez, Eduardo; Llano, German; Castano Zapata, Jairo

    2010-01-01

    The downy mildew (Peronospora sparsa), is one of the most important diseases of rose in Colombia, causing losses up to 8%. The objective of this research was to determine a preventive control of the disease, through the improvement of the nutritional balance of the plant. The first phase, involved the effect of different concentrations of N, K, Ca, B and Mn, on the incidence and severity of the disease, and in the second one, the evaluation of the best five treatments of the first phase. The treatments were applied to the varieties Charlotte, Classy and Malibu during 4 weeks, using a splitting plot design with six replications. After one month the plants were inoculated with the fungus at a concentration of 3x104 sporangia mL. The results of the area under the disease progress curve (AUDPC), showed that the plants of Charlotte with 200 ppm of Si had the lowest expression of the disease. In Classy, the best treatment was the standard solution, demonstrating that the effects of the treatments depend of the variety. Charlotte and Malibu showed susceptibility, while Classy, partial resistance to the disease.

  11. Temperature effect on rose downy mildew development under environmental controlled conditions

    Directory of Open Access Journals (Sweden)

    Juan José Filgueira D.

    2014-04-01

    Full Text Available The rose downy mildew disease, caused by Peronospora sparsa Berkeley, is one of the most important that affect rose crops in Colombia. To manage this disease, flower growers must deal with high-costs due to the excessive application of fungicides, but without good results. Studies on P. sparsa behavior have shown its narrow relationship with environmental conditions. In this study, the temperature effect was evaluated during the infection and sporulation of P. sparsa in Charlotte leaflets, a susceptible commercial variety, through an environmental controlled conditions system. Infection and sporulation were observed at different temperatures in a range of from 4 to 40°C. Infection with the absence of or very low sporulation was observed at 4°C. The most favorable pathogen responses were between 15 and 18°C in terms of inoculum concentration and sporulation percentage. There was no infection or leaflet change above 35°C. According to the results, sporulation can occur from 4 to 33°C, confirming the fact that P. sparsa is able to reproduce throughout a wide temperature range.

  12. Abiotic stresses affect Trichoderma harzianum T39-induced resistance to downy mildew in grapevine.

    Science.gov (United States)

    Roatti, Benedetta; Perazzolli, Michele; Gessler, Cesare; Pertot, Ilaria

    2013-12-01

    Enhancement of plant defense through the application of resistance inducers seems a promising alternative to chemical fungicides for controlling crop diseases but the efficacy can be affected by abiotic factors in the field. Plants respond to abiotic stresses with hormonal signals that may interfere with the mechanisms of induced systemic resistance (ISR) to pathogens. In this study, we exposed grapevines to heat, drought, or both to investigate the effects of abiotic stresses on grapevine resistance induced by Trichoderma harzianum T39 (T39) to downy mildew. Whereas the efficacy of T39-induced resistance was not affected by exposure to heat or drought, it was significantly reduced by combined abiotic stresses. Decrease of leaf water potential and upregulation of heat-stress markers confirmed that plants reacted to abiotic stresses. Basal expression of defense-related genes and their upregulation during T39-induced resistance were attenuated by abiotic stresses, in agreement with the reduced efficacy of T39. The evidence reported here suggests that exposure of crops to abiotic stress should be carefully considered to optimize the use of resistance inducers, especially in view of future global climate changes. Expression analysis of ISR marker genes could be helpful to identify when plants are responding to abiotic stresses, in order to optimize treatments with resistance inducers in field.

  13. Overexpression of VpPR10.1 by an efficient transformation method enhances downy mildew resistance in V. vinifera.

    Science.gov (United States)

    Su, Hang; Jiao, Yun-Tong; Wang, Fang-Fang; Liu, Yue-E; Niu, Wei-Li; Liu, Guo-Tian; Xu, Yan

    2018-05-01

    Putrescine and spermidine increase the transformation efficiency of Vitis vinifera L. cv. Thompson seedless. Accumulation of VpPR10.1 in transgenic V. vinifera Thompson seedless, likely increases its resistance to downy mildew. A more efficient method is described for facilitating Agrobacterium-mediated transformation of Vitis vinifera L. cv. Thompson Seedless somatic embryogenesis using polyamines (PAs). The efficacies of putrescine, spermidine and spermine are identified at a range of concentrations (10 µM, 100 µM and 1 mM) added to the culture medium during somatic embryo growth. Putrescine (PUT) and spermidine (SPD) promote the recovery of proembryonic masses (PEM) and the development of somatic embryos (SE) after co-cultivation. Judging from the importance of the time-frame in genetic transformation, PAs added at the co-cultivation stage have a stronger effect than delayed selection treatments, which are superior to antibiotic treatments in the selection stage. Best embryogenic responses are with 1 mM PUT and 100 µM SPD added to the co-culture medium. Using the above method, a pathogenesis-related gene (VpPR10.1) from Chinese wild Vitis pseudoreticulata was transferred into Thompson Seedless for functional evaluation. The transgenic line, confirmed by western blot analysis, was inoculated with Plasmopara viticola to test for downy mildew resistance. Based on observed restrictions of hyphal growth and increases in H 2 O 2 accumulation in the transgenic plants, the accumulation of VpPR10.1 likely enhanced the transgenic plants resistance to downy mildew.

  14. Pl(17) is a novel gene independent of known downy mildew resistance genes in the cultivated sunflower (Helianthus annuus L.).

    Science.gov (United States)

    Qi, L L; Long, Y M; Jan, C C; Ma, G J; Gulya, T J

    2015-04-01

    Pl 17, a novel downy mildew resistance gene independent of known downy mildew resistance genes in sunflowers, was genetically mapped to linkage group 4 of the sunflower genome. Downy mildew (DM), caused by Plasmopara halstedii (Farl.). Berl. et de Toni, is one of the serious sunflower diseases in the world due to its high virulence and the variability of the pathogen. DM resistance in the USDA inbred line, HA 458, has been shown to be effective against all virulent races of P. halstedii currently identified in the USA. To determine the chromosomal location of this resistance, 186 F 2:3 families derived from a cross of HA 458 with HA 234 were phenotyped for their resistance to race 734 of P. halstedii. The segregation ratio of the population supported that the resistance was controlled by a single dominant gene, Pl 17. Simple sequence repeat (SSR) and single nucleotide polymorphism (SNP) primers were used to identify molecular markers linked to Pl 17. Bulked segregant analysis using 849 SSR markers located Pl 17 to linkage group (LG) 4, which is the first DM gene discovered in this linkage group. An F2 population of 186 individuals was screened with polymorphic SSR and SNP primers from LG4. Two flanking markers, SNP SFW04052 and SSR ORS963, delineated Pl 17 in an interval of 3.0 cM. The markers linked to Pl 17 were validated in a BC3 population. A search for the physical location of flanking markers in sunflower genome sequences revealed that the Pl 17 region had a recombination frequency of 0.59 Mb/cM, which was a fourfold higher recombination rate relative to the genomic average. This region can be considered amenable to molecular manipulation for further map-based cloning of Pl 17.

  15. Mutation breeding for downy mildew resistance in pearl millet. Nucleo-cytoplasmic interactions in disease-resistant lines

    International Nuclear Information System (INIS)

    Murty, B.R.; Thakur, S.R.; Prakash, N.; Mehta, S.L.; Bhakta, S.T.

    1983-01-01

    Under the need to rescue hybrid pearl millet cultivation in India from devastating damage by downy mildew, a mutation induction project was started in 1971 to make the commonly used male sterile parent Tift 23A resistant to the disease. Simultaneously sources of resistance from West Africa were used in crossbreeding by which climatic adaptation and male sterility had to be transferred. A number of mildew-resistant hybrids were developed, both from induced mutation and introduction. The resistant male sterile lines were further examined as to their common features and differences from susceptible lines. A strong evidence for nuclear-cytoplasmic interaction was obtained by biochemical and ultrastructural investigations. (author)

  16. Characterization of a Brome mosaic virus strain and its use as a vector for gene silencing in monocotyledonous hosts.

    Science.gov (United States)

    Ding, Xin Shun; Schneider, William L; Chaluvadi, Srinivasa Rao; Mian, M A Rouf; Nelson, Richard S

    2006-11-01

    Virus-induced gene silencing (VIGS) is used to analyze gene function in dicotyledonous plants but less so in monocotyledonous plants (particularly rice and corn), partially due to the limited number of virus expression vectors available. Here, we report the cloning and modification for VIGS of a virus from Festuca arundinacea Schreb. (tall fescue) that caused systemic mosaic symptoms on barley, rice, and a specific cultivar of maize (Va35) under greenhouse conditions. Through sequencing, the virus was determined to be a strain of Brome mosaic virus (BMV). The virus was named F-BMV (F for Festuca), and genetic determinants that controlled the systemic infection of rice were mapped to RNAs 1 and 2 of the tripartite genome. cDNA from RNA 3 of the Russian strain of BMV (R-BMV) was modified to accept inserts from foreign genes. Coinoculation of RNAs 1 and 2 from F-BMV and RNA 3 from R-BMV expressing a portion of a plant gene to leaves of barley, rice, and maize plants resulted in visual silencing-like phenotypes. The visual phenotypes were correlated with decreased target host transcript levels in the corresponding leaves. The VIGS visual phenotype varied from maintained during silencing of actin 1 transcript expression to transient with incomplete penetration through affected tissue during silencing of phytoene desaturase expression. F-BMV RNA 3 was modified to allow greater accumulation of virus while minimizing virus pathogenicity. The modified vector C-BMV(A/G) (C for chimeric) was shown to be useful for VIGS. These BMV vectors will be useful for analysis of gene function in rice and maize for which no VIGS system is reported.

  17. Transfer of Downy Mildew Resistance from Wild Basil (Ocimum americanum) to Sweet Basil (O. basilicum).

    Science.gov (United States)

    Ben-Naim, Yariv; Falach, Lidan; Cohen, Yigal

    2018-01-01

    Sweet basil (Ocimum basilicum) is susceptible to downy mildew caused by the oomycete foliar pathogen Peronospora belbahrii. No resistant varieties of sweet basil are commercially available. Here, we report on the transfer of resistance gene Pb1 from the highly resistant tetraploid wild basil O. americanum var. americanum (PI 500945, 2n = 4x = 48) to the tetraploid susceptible O. basilicum 'Sweet basil' (2n = 4x = 48). F1 progeny plants derived from the interspecific hybridization PI 500945 × Sweet basil were resistant, indicating that the gene controlling resistance (Pb1) is dominant, but sterile due to the genetic distance between the parents. Despite their sterility, F1 plants were pollinated with the susceptible parent and 115 first backcross generation to the susceptible parent (BCs1) embryos were rescued in vitro. The emerging BCs1 plants segregated, upon inoculation, 5:1 resistant/susceptible, suggesting that resistance in F1 was controlled by a pair of dominant genes (Pb1A and Pb1A'). Thirty-one partially fertile BCs1 plants were self-pollinated to obtain BCs1-F2 or were backcrossed to Sweet basil to obtain the second backcross generation to the susceptible parent (BCs2). In total, 1 BCs1-F2 and 22 BCs2 progenies were obtained. The BCs1-F2 progeny segregated 35:1 resistant/susceptible, as expected from a tetraploid parent with two dominant resistant genes. The 22 BCs2 progenies segregated 1:1 resistant/susceptible (for a BCs1 parent that carried one dominant gene for resistance) or 5:1 (for a BCs1 parent that carried two dominant genes for resistance) at a ratio of 4:1. The data suggest that a pair of dominant genes (Pb1A and Pb1A') residing on a two homeologous chromosomes is responsible for resistance of PI 500945 against P. belbahrii.

  18. Genetic modification of European winegrapes with genes from an American wild relative confers resistance to the major diseases powdery and downy mildew

    Science.gov (United States)

    The two most economically important diseases of grapevine cultivation worldwide are caused by the fungal pathogen powdery mildew (Erysiphe necator syn. Uncinula necator) and the oomycete, downy mildew (Plasmopara viticola). These pathogens, endemic to North America, were introduced into Europe in t...

  19. Effect of Pseudomonas spp on infection of Peronosporaparasitica (Pers. Fr), the pathogen of downy mildew on Chinese cabbage

    Science.gov (United States)

    Damiri, N.; Mulawarman; Umayah, A.; Agustin, S. E.; Rahmiyah, M.

    2018-01-01

    This research was conducted to study the effect of the application of Pseudomonasspp on infection of Peronosporaparasitica (Pers. Fr), the pathogen of Downy mildew on Chinese cabbage. The research was conducted in the laboratory and greenhouse Department of Plant Pests and Diseases Faculty of Agriculture Sriwijaya University, Inderalaya, OganIlir South Sumatra Indonesia. The research was conducted in the laboratory and greenhouse Department of Plant Pests and Diseases Faculty of Agriculture Sriwijaya University, Inderalaya, Ogan Ilir South Sumatra Indonesia. The research was conducted using Completely Randomized Design with ten treatments including control. ie: isolate A, Isolate B, isolate C, isolate D, isolate E, isolate F, isolate G, isolate H, isolate I and control. Each treatment consists of four replications. Results of the study showed that the application of Pseudomonas spp. can suppress the infection of P. parasitica on Chinese cabbage. The lowest disease intensity was shown by treatment C (isolate Pseudomonas sp.) which was significantly different from control. The best treatment in suppressing disease severity of downy mildew on chinese cabbage was isolate H which had disease severity of 37.07 percent, which was significantly different from control and other treatment.

  20. Draft genome sequence of Sclerospora graminicola, the pearl millet downy mildew pathogen

    Directory of Open Access Journals (Sweden)

    Navajeet Chakravartty

    2017-12-01

    Full Text Available Sclerospora graminicola pathogen is the most important biotic production constraints of pearl millet in India, Africa and other parts of the world. We report a de novo whole genome assembly and analysis of pathotype 1, one of the most virulent pathotypes of S. graminicola from India. The whole genome sequencing was performed by sequencing of 7.38 Gb with 73,889,924 paired end reads from the paired-end library, and 1.15 Gb with 3,851,788 reads from the mate pair library generated from Illumina HiSeq 2500 and Illumina MiSeq, respectively. A total 597,293 filtered sub reads with average read length of 6.39 Kb was generated on PACBIO RSII with P6-C4 chemistry. Assembled draft genome sequence of S. graminicola pathotype 1 was 299,901,251 bp in length, N50 of 17,909 bp with a minimum of 1 Kb scaffold size. The GC content was 47.2 % consisting of 26,786 scaffolds with longest scaffold size of 238,843 bp. The overall coverage was 40X. The draft genome sequence was used for gene prediction using AUGUSTUS which resulted in 65,404 genes using Saccharomyces cerevisiae as a model. A total of 52,285 predicted genes found homology using BLASTX against nr database and 38,120 genes were observed with a significant BLASTX match with E-value cutoff of 1e-5 and 40% identity percentage. Out of 38,120 genes annotated a set of 11,873 genes had UniProt entries, while 7,248 were GO terms and 9,686 with KEGG IDs. Of the 7,248 GO terms, 2,724 were associated with the biological processes. The genome information of downy mildew pathogen is available in the NCBI GenBank database. The Sclerospora graminicola whole genome shotgun (WGS project has the project accession MIQA00000000. This version of the project (02 has the accession number MIQA02000000, and consists of sequences MIQA02000001-MIQA02026786, with BioProject ID PRJNA325098 and BioSample ID SAMN05219233. This study may help understand the evolutionary pattern of pathogen and aid elucidation of effector evolution for

  1. QTL mapping of downy and powdery mildew resistances in PI 197088 cucumber with genotyping-by-sequencing in RIL population.

    Science.gov (United States)

    Wang, Yuhui; VandenLangenberg, Kyle; Wen, Changlong; Wehner, Todd C; Weng, Yiqun

    2018-03-01

    Host resistances in PI 197088 cucumber to downy and powdery mildew pathogens are conferred by 11 (3 with major effect) and 4 (1 major effect) QTL, respectively, and three of which are co-localized. The downy mildew (DM) and powdery mildew (PM) are the two most important foliar diseases of cucurbit crops worldwide. The cucumber accession PI 197088 exhibits high-level resistances to both pathogens. Here, we reported QTL mapping results for DM and PM resistances with 148 recombinant inbred lines from a cross between PI 197088 and the susceptible line 'Coolgreen'. Phenotypic data on responses to natural DM and PM infection were collected in multi-year and multi-location replicated field trials. A high-density genetic map with 2780 single nucleotide polymorphisms (SNPs) from genotyping-by-sequencing and 55 microsatellite markers was developed, which revealed genomic regions with segregation distortion and mis-assemblies in the '9930' cucumber draft genome. QTL analysis identified 11 and 4 QTL for DM and PM resistances accounting for more than 73.5 and 63.0% total phenotypic variance, respectively. Among the 11 DM resistance QTL, dm5.1, dm5.2, and dm5.3 were major-effect contributing QTL, whereas dm1.1, dm2.1, and dm6.2 conferred susceptibility. Of the 4 QTL for PM resistance, pm5.1 was the major-effect QTL explaining 32.4% phenotypic variance and the minor-effect QTL pm6.1 contributed to disease susceptibility. Three PM QTL, pm2.1, pm5.1, and pm6.1, were co-localized with DM QTL dm2.1, dm5.2, and dm6.1, respectively, which was consistent with the observed linkage of PM and DM resistances in PI 197088. The genetic architecture of DM resistance in PI 197088 and another resistant line WI7120 (PI 330628) was compared, and the potential of using PI 197088 in cucumber breeding for downy and powdery mildew resistances is discussed.

  2. Resistance to Downy Mildew in Lettuce 'La Brillante' is Conferred by Dm50 Gene and Multiple QTL.

    Science.gov (United States)

    Simko, Ivan; Ochoa, Oswaldo E; Pel, Mathieu A; Tsuchida, Cayla; Font I Forcada, Carolina; Hayes, Ryan J; Truco, Maria-Jose; Antonise, Rudie; Galeano, Carlos H; Michelmore, Richard W

    2015-09-01

    Many cultivars of lettuce (Lactuca sativa L.) are susceptible to downy mildew, a nearly globally ubiquitous disease caused by Bremia lactucae. We previously determined that Batavia type cultivar 'La Brillante' has a high level of field resistance to the disease in California. Testing of a mapping population developed from a cross between 'Salinas 88' and La Brillante in multiple field and laboratory experiments revealed that at least five loci conferred resistance in La Brillante. The presence of a new dominant resistance gene (designated Dm50) that confers complete resistance to specific isolates was detected in laboratory tests of seedlings inoculated with multiple diverse isolates. Dm50 is located in the major resistance cluster on linkage group 2 that contains at least eight major, dominant Dm genes conferring resistance to downy mildew. However, this Dm gene is ineffective against the isolates of B. lactucae prevalent in the field in California and the Netherlands. A quantitative trait locus (QTL) located at the Dm50 chromosomal region (qDM2.2) was detected, though, when the amount of disease was evaluated a month before plants reached harvest maturity. Four additional QTL for resistance to B. lactucae were identified on linkage groups 4 (qDM4.1 and qDM4.2), 7 (qDM7.1), and 9 (qDM9.2). The largest effect was associated with qDM7.1 (up to 32.9% of the total phenotypic variance) that determined resistance in multiple field experiments. Markers identified in the present study will facilitate introduction of these resistance loci into commercial cultivars of lettuce.

  3. Historical introgression of the downy mildew resistance gene Rpv12 from the Asian species Vitis amurensis into grapevine varieties.

    Directory of Open Access Journals (Sweden)

    Silvia Venuti

    Full Text Available The Amur grape (Vitis amurensis Rupr. thrives naturally in cool climates of Northeast Asia. Resistance against the introduced pathogen Plasmopara viticola is common among wild ecotypes that were propagated from Manchuria into Chinese vineyards or collected by Soviet botanists in Siberia, and used for the introgression of resistance into wine grapes (Vitis vinifera L.. A QTL analysis revealed a dominant gene Rpv12 that explained 79% of the phenotypic variance for downy mildew resistance and was inherited independently of other resistance genes. A Mendelian component of resistance-a hypersensitive response in leaves challenged with P. viticola-was mapped in an interval of 0.2 cM containing an array of coiled-coil NB-LRR genes on chromosome 14. We sequenced 10-kb genic regions in the Rpv12(+ haplotype and identified polymorphisms in 12 varieties of V. vinifera using next-generation sequencing. The combination of two SNPs in single-copy genes flanking the NB-LRR cluster distinguished the resistant haplotype from all others found in 200 accessions of V. vinifera, V. amurensis, and V. amurensis x V. vinifera crosses. The Rpv12(+ haplotype is shared by 15 varieties, the most ancestral of which are the century-old 'Zarja severa' and 'Michurinets'. Before this knowledge, the chromosome segment around Rpv12(+ became introgressed, shortened, and pyramided with another downy mildew resistance gene from North American grapevines (Rpv3 only by phenotypic selection. Rpv12(+ has an additive effect with Rpv3(+ to protect vines against natural infections, and confers foliar resistance to strains that are virulent on Rpv3(+ plants.

  4. Predicting the risk of cucurbit downy mildew in the eastern United States using an integrated aerobiological model

    Science.gov (United States)

    Neufeld, K. N.; Keinath, A. P.; Gugino, B. K.; McGrath, M. T.; Sikora, E. J.; Miller, S. A.; Ivey, M. L.; Langston, D. B.; Dutta, B.; Keever, T.; Sims, A.; Ojiambo, P. S.

    2017-11-01

    Cucurbit downy mildew caused by the obligate oomycete, Pseudoperonospora cubensis, is considered one of the most economically important diseases of cucurbits worldwide. In the continental United States, the pathogen overwinters in southern Florida and along the coast of the Gulf of Mexico. Outbreaks of the disease in northern states occur annually via long-distance aerial transport of sporangia from infected source fields. An integrated aerobiological modeling system has been developed to predict the risk of disease occurrence and to facilitate timely use of fungicides for disease management. The forecasting system, which combines information on known inoculum sources, long-distance atmospheric spore transport and spore deposition modules, was tested to determine its accuracy in predicting risk of disease outbreak. Rainwater samples at disease monitoring sites in Alabama, Georgia, Louisiana, New York, North Carolina, Ohio, Pennsylvania and South Carolina were collected weekly from planting to the first appearance of symptoms at the field sites during the 2013, 2014, and 2015 growing seasons. A conventional PCR assay with primers specific to P. cubensis was used to detect the presence of sporangia in rain water samples. Disease forecasts were monitored and recorded for each site after each rain event until initial disease symptoms appeared. The pathogen was detected in 38 of the 187 rainwater samples collected during the study period. The forecasting system correctly predicted the risk of disease outbreak based on the presence of sporangia or appearance of initial disease symptoms with an overall accuracy rate of 66 and 75%, respectively. In addition, the probability that the forecasting system correctly classified the presence or absence of disease was ≥ 73%. The true skill statistic calculated based on the appearance of disease symptoms in cucurbit field plantings ranged from 0.42 to 0.58, indicating that the disease forecasting system had an acceptable to good

  5. [An early warning method of cucumber downy mildew in solar greenhouse based on canopy temperature and humidity modeling].

    Science.gov (United States)

    Wang, Hui; Li, Mei-lan; Xu, Jian-ping; Chen, Mei-xiang; Li, Wen-yong; Li, Ming

    2015-10-01

    The greenhouse environmental parameters can be used to establish greenhouse nirco-climate model, which can combine with disease model for early warning, with aim of ecological controlling diseases to reduce pesticide usage, and protecting greenhouse ecological environment to ensure the agricultural product quality safety. Greenhouse canopy leaf temperature and air relative humidity, models were established using energy balance and moisture balance principle inside the greenhouse. The leaf temperature model considered radiation heat transfer between the greenhouse crops, wall, soil and cover, plus the heat exchange caused by indoor net radiation and crop transpiration. Furthermore, the water dynamic balance in the greenhouse including leaf transpiration, soil evaporation, cover and leaf water vapor condensation, was considered to develop a relative humidity model. The primary infection and latent period warning models for cucumber downy mildew (Pseudoperonospora cubensis) were validated using the results of the leaf temperature and relative humidity model, and then the estimated disease occurrence date of cucumber downy mildew was compared with actual disease occurrence date of field observation. Finally, the results were verified by the measured temperature and humidity data of September and October, 2014. The results showed that the root mean square deviations (RMSDs) of the measured and estimated leaf temperature were 0.016 and 0.024 °C, and the RMSDs of the measured and estimated air relative humidity were 0.15% and 0.13%, respectively. Combining the result of estimated temperature and humidity models, a cucumber disease early warning system was established to forecast the date of disease occurrence, which met with the real date. Thus, this work could provide the micro-environment data for the early warning system of cucumber diseases in solar greenhouses.

  6. Scattering of Neutrons by Liquid Bromine; Diffusion des neutrons par le brome liquide; R; Dispersion de neutrones por bromo liquido

    Energy Technology Data Exchange (ETDEWEB)

    Coote, G E; Haywood, B C [Atomic Energy of Canada Ltd., Chalk River, Ontario (Canada)

    1963-01-15

    Neutrons of 0.037 eV and 0.0088 eV were scattered from a thin sample of liquid bromine at room temperature, and the energy distributions of the scattered neutrons measured at angles from 10{sup o} to 160{sup o} by the time-of-flight method. The angular distribution confirms the results of a previous study by Caglioti. Spectra were expressed in the form of the ''scattering law'' S({alpha},{beta}) of Egelstaff and analysed to derive the generalized frequency distribution p({beta}) of atomic motions in the liquid. The function p({beta}) has a broad smooth peak centred at {beta}{approx}0.3, and shows no evidence for discrete levels in the measured range 0<{beta}< 0.8: the general shape of the curve supports the 'quasi-crystalline' picture of the liquid. Difficulty in the absolute normalization of p({beta}) is discussed. (author) [French] Des neutrons de 0,037 eV et 0,0088 eV ont ete dissuses par un echantillon mince de brome liquide a la temperature ambiante; on a mesure, par la methode du temps de vol, les distributions d'energies des neutrons diffuses, pour des angles compris entre 10{sup o} et 160{sup o}. La distribution angulaire confirme les resultats d'une etude anterieure faite par Caglioti. Les spectres ont ete exprimes d'apres la ''loi de dispersion'' S({alpha},{beta}) d'Egelstaff et analyses pour determiner la distribution generalisee des frequences p({beta}) des mouvements atomiques dans le liquide. La fonction p({beta}) comporte un pic large et a faible pente dont le centre est a {beta} {approx} 0,3 et ne presente aucune indication de niveaux discrets dans la gamme mesuree 0 < {beta} < 0,8; la forme generale de la courbe confirme l'image ''quasi cristalline'' du liquide. Les auteurs examinent les difficultes qui s'opposent a la normalisation absolue de p({beta}). (author) [Spanish] Los autores han estudiado la dispersion de neutrones de 0,037 eV y 0,0088 eV en una muestra de bromo liquido de espesor reducido, a temperatura ambiente. La distribucion

  7. A first linkage map and downy mildew resistance QTL discovery for sweet basil (Ocimum basilicum) facilitated by double digestion restriction site associated DNA sequencing (ddRADseq).

    Science.gov (United States)

    Pyne, Robert; Honig, Josh; Vaiciunas, Jennifer; Koroch, Adolfina; Wyenandt, Christian; Bonos, Stacy; Simon, James

    2017-01-01

    Limited understanding of sweet basil (Ocimum basilicum L.) genetics and genome structure has reduced efficiency of breeding strategies. This is evidenced by the rapid, worldwide dissemination of basil downy mildew (Peronospora belbahrii) in the absence of resistant cultivars. In an effort to improve available genetic resources, expressed sequence tag simple sequence repeat (EST-SSR) and single nucleotide polymorphism (SNP) markers were developed and used to genotype the MRI x SB22 F2 mapping population, which segregates for response to downy mildew. SNP markers were generated from genomic sequences derived from double digestion restriction site associated DNA sequencing (ddRADseq). Disomic segregation was observed in both SNP and EST-SSR markers providing evidence of an O. basilicum allotetraploid genome structure and allowing for subsequent analysis of the mapping population as a diploid intercross. A dense linkage map was constructed using 42 EST-SSR and 1,847 SNP markers spanning 3,030.9 cM. Multiple quantitative trait loci (QTL) model (MQM) analysis identified three QTL that explained 37-55% of phenotypic variance associated with downy mildew response across three environments. A single major QTL, dm11.1 explained 21-28% of phenotypic variance and demonstrated dominant gene action. Two minor QTL dm9.1 and dm14.1 explained 5-16% and 4-18% of phenotypic variance, respectively. Evidence is provided for an additive effect between the two minor QTL and the major QTL dm11.1 increasing downy mildew susceptibility. Results indicate that ddRADseq-facilitated SNP and SSR marker genotyping is an effective approach for mapping the sweet basil genome.

  8. Genotyping-by-sequencing targeting of a novel downy mildew resistance gene Pl 20 from wild Helianthus argophyllus for sunflower (Helianthus annuus L.).

    Science.gov (United States)

    Ma, G J; Markell, S G; Song, Q J; Qi, L L

    2017-07-01

    Genotyping-by-sequencing revealed a new downy mildew resistance gene, Pl 20 , from wild Helianthus argophyllus located on linkage group 8 of the sunflower genome and closely linked to SNP markers that facilitate the marker-assisted selection of resistance genes. Downy mildew (DM), caused by Plasmopara halstedii, is one of the most devastating and yield-limiting diseases of sunflower. Downy mildew resistance identified in wild Helianthus argophyllus accession PI 494578 was determined to be effective against the predominant and virulent races of P. halstedii occurring in the United States. The evaluation of 114 BC 1 F 2:3 families derived from the cross between HA 89 and PI 494578 against P. halstedii race 734 revealed that single dominant gene controls downy mildew resistance in the population. Genotyping-by-sequencing analysis conducted in the BC 1 F 2 population indicated that the DM resistance gene derived from wild H. argophyllus PI 494578 is located on the upper end of the linkage group (LG) 8 of the sunflower genome, as was determined single nucleotide polymorphism (SNP) markers associated with DM resistance. Analysis of 11 additional SNP markers previously mapped to this region revealed that the resistance gene, named Pl 20 , co-segregated with four markers, SFW02745, SFW09076, S8_11272025, and S8_11272046, and is flanked by SFW04358 and S8_100385559 at an interval of 1.8 cM. The newly discovered P. halstedii resistance gene has been introgressed from wild species into cultivated sunflower to provide a novel gene with DM resistance. The homozygous resistant individuals were selected from BC 2 F 2 progenies with the use of markers linked to the Pl 20 gene, and these lines should benefit the sunflower community for Helianthus improvement.

  9. Genetics and mapping of a novel downy mildew resistance gene, Pl(18), introgressed from wild Helianthus argophyllus into cultivated sunflower (Helianthus annuus L.).

    Science.gov (United States)

    Qi, L L; Foley, M E; Cai, X W; Gulya, T J

    2016-04-01

    A novel downy mildew resistance gene, Pl(18), was introgressed from wild Helianthus argophyllus into cultivated sunflower and genetically mapped to linkage group 2 of the sunflower genome. The new germplasm, HA-DM1, carrying Pl(18) has been released to the public. Sunflower downy mildew (DM) is considered to be the most destructive foliar disease that has spread to every major sunflower-growing country of the world, except Australia. A new dominant downy mildew resistance gene (Pl 18) transferred from wild Helianthus argophyllus (PI 494573) into cultivated sunflower was mapped to linkage group (LG) 2 of the sunflower genome using bulked segregant analysis with 869 simple sequence repeat (SSR) markers. Phenotyping 142 BC1F2:3 families derived from the cross of HA 89 and H. argophyllus confirmed the single gene inheritance of resistance. Since no other Pl gene has been mapped to LG2, this gene was novel and designated as Pl (18). SSR markers CRT214 and ORS203 flanked Pl(18) at a genetic distance of 1.1 and 0.4 cM, respectively. Forty-six single nucleotide polymorphism (SNP) markers that cover the Pl(18) region were surveyed for saturation mapping of the region. Six co-segregating SNP markers were 1.2 cM distal to Pl(18), and another four co-segregating SNP markers were 0.9 cM proximal to Pl(18). The new BC2F4-derived germplasm, HA-DM1, carrying Pl(18) has been released to the public. This new line is highly resistant to all Plasmopara halstedii races identified in the USA providing breeders with an effective new source of resistance against downy mildew in sunflower. The molecular markers that were developed will be especially useful in marker-assisted selection and pyramiding of Pl resistance genes because of their close proximity to the gene and the availability of high-throughput SNP detection assays.

  10. Discovery and introgression of the wild sunflower-derived novel downy mildew resistance gene Pl 19 in confection sunflower (Helianthus annuus L.).

    Science.gov (United States)

    Zhang, Z W; Ma, G J; Zhao, J; Markell, S G; Qi, L L

    2017-01-01

    A new downy mildew resistance gene, Pl 19 , was identified from wild Helianthus annuus accession PI 435414, introduced to confection sunflower, and genetically mapped to linkage group 4 of the sunflower genome. Wild Helianthus annuus accession PI 435414 exhibited resistance to downy mildew, which is one of the most destructive diseases to sunflower production globally. Evaluation of the 140 BC 1 F 2:3 families derived from the cross of CMS CONFSCLB1 and PI 435414 against Plasmopara halstedii race 734 revealed that a single dominant gene controls downy mildew resistance in the population. Bulked segregant analysis conducted in the BC 1 F 2 population with 860 simple sequence repeat (SSR) markers indicated that the resistance derived from wild H. annuus was associated with SSR markers located on linkage group (LG) 4 of the sunflower genome. To map and tag this resistance locus, designated Pl 19 , 140 BC 1 F 2 individuals were used to construct a linkage map of the gene region. Two SSR markers, ORS963 and HT298, were linked to Pl 19 within a distance of 4.7 cM. After screening 27 additional single nucleotide polymorphism (SNP) markers previously mapped to this region, two flanking SNP markers, NSA_003564 and NSA_006089, were identified as surrounding the Pl 19 gene at a distance of 0.6 cM from each side. Genetic analysis indicated that Pl 19 is different from Pl 17 , which had previously been mapped to LG4, but is closely linked to Pl 17 . This new gene is highly effective against the most predominant and virulent races of P. halstedii currently identified in North America and is the first downy mildew resistance gene that has been transferred to confection sunflower. The selected resistant germplasm derived from homozygous BC 2 F 3 progeny provides a novel gene for use in confection sunflower breeding programs.

  11. Estimates of Combining Ability and Heterosis for Yield and Its Related Traits in Pearl Millet Inbred Lines under Downy Mildew Prevalent Areas of Senegal

    Directory of Open Access Journals (Sweden)

    Ghislain Kanfany

    2018-01-01

    Full Text Available Pearl millet is an important cereal crop for smallholder farmers’ food security in West and Central Africa. However, its production has stagnated due to several factors such as the continuous use of local populations. A set of 17 inbred lines was crossed with Sosat C 88 and Souna 3 following a line × tester mating design. The F1 hybrids, their parents, and a check were evaluated in Bambey and Nioro research stations during the rainy season of 2017. Data on downy mildew incidence, plant height, flowering time, panicle length and diameter, productive tillers, thousand-grain weight, panicle, and grain yield were recorded. GCA and SCA mean squares were significant for most of the traits indicating that both additive and nonadditive gene effects were involved in the control of the inheritance of these traits. However, the contribution of GCA to total mean squares was higher than that of SCA for all the traits, providing that additive gene action was more important in their inheritance. The top-cross hybrid IBL155-2-1 × Sosat C 88 exhibited negative and significant SCA effects for downy mildew incidence, flowering time, and plant height. Lines IBL003-B-1, IBL091-1-1, IBL095-4-1, IBL110-B-1, and IBL 206-1-1 had positive GCA effects for grain yield and negative GCA effects for downy mildew, flowering time, and plant height. These lines can be used as parents to create synthetic varieties or hybrids.

  12. Identification and characterization of potential NBS-encoding resistance genes and induction kinetics of a putative candidate gene associated with downy mildew resistance in Cucumis

    Directory of Open Access Journals (Sweden)

    Wan Hongjian

    2010-08-01

    Full Text Available Abstract Background Due to the variation and mutation of the races of Pseudoperonospora cubensis, downy mildew has in recent years become the most devastating leaf disease of cucumber worldwide. Novel resistance to downy mildew has been identified in the wild Cucumis species, C. hystrix Chakr. After the successful hybridization between C. hystrix and cultivated cucumber (C. sativus L., an introgression line (IL5211S was identified as highly resistant to downy mildew. Nucleotide-binding site and leucine-rich repeat (NBS-LRR genes are the largest class of disease resistance genes cloned from plant with highly conserved domains, which can be used to facilitate the isolation of candidate genes associated with downy mildew resistance in IL5211S. Results Degenerate primers that were designed based on the conserved motifs in the NBS domain of resistance (R proteins were used to isolate NBS-type sequences from IL5211S. A total of 28 sequences were identified and named as cucumber (C. sativus = CS resistance gene analogs as CSRGAs. Polygenetic analyses separated these sequences into four different classes. Quantitative real-time polymerase chain reaction (qRT-PCR analysis showed that these CSRGAs expressed at different levels in leaves, roots, and stems. In addition, introgression from C. hystrix induced expression of the partial CSRGAs in cultivated cucumber, especially CSRGA23, increased four-fold when compared to the backcross parent CC3. Furthermore, the expression of CSRGA23 under P. cubensis infection and abiotic stresses was also analyzed at different time points. Results showed that the P. cubensis treatment and four tested abiotic stimuli, MeJA, SA, ABA, and H2O2, triggered a significant induction of CSRGA23 within 72 h of inoculation. The results indicate that CSRGA23 may play a critical role in protecting cucumber against P. cubensis through a signaling the pathway triggered by these molecules. Conclusions Four classes of NBS-type RGAs were

  13. Resonance quadripolaire nucleaire dans les halogenures d'actinides, ThBr 4, ThCl 4 ET UCl 4. II. Polymorphisme et transition de phase du premier ordre dans ThBr 4. Resonance du Brome dans UBr 4.

    Science.gov (United States)

    Gourdji, M.; Péneau, A.; Genet, M.; Guibé, L.

    1983-12-01

    La poursuite de recherches antérieures a permis de caractériser la résonance quadripolaire du brome dans la phase α de ThBr 4 et d'étudier la variation, en fonction de la température, entre 63 et 295 K, de la fréquence de résonance, ν Q(T), correspondante. Une première analyse des conditions expérimentales du passage de la transition α↔β à 426 C a été faite. La résonance du brome dans UBr 4 a également été observée et l'étude en fonction de la température des fréquences de résonance (il y a deux résonances distinctes pour chacun des deux isotopes du brome dans ce composé) a révélé un comportement inattendu en ce sens que les pentes dν Q/dT des courbes ν Q(T) correspondant aux deux résonances sont de signe contraire.

  14. The plasmodesmal protein PDLP1 localises to haustoria-associated membranes during downy mildew infection and regulates callose deposition.

    Directory of Open Access Journals (Sweden)

    Marie-Cécile Caillaud

    2014-10-01

    Full Text Available The downy mildew pathogen Hyaloperonospora arabidopsidis (Hpa is a filamentous oomycete that invades plant cells via sophisticated but poorly understood structures called haustoria. Haustoria are separated from the host cell cytoplasm and surrounded by an extrahaustorial membrane (EHM of unknown origin. In some interactions, including Hpa-Arabidopsis, haustoria are progressively encased by host-derived, callose-rich materials but the molecular mechanisms by which callose accumulates around haustoria remain unclear. Here, we report that PLASMODESMATA-LOCATED PROTEIN 1 (PDLP1 is expressed at high levels in Hpa infected cells. Unlike other plasma membrane proteins, which are often excluded from the EHM, PDLP1 is located at the EHM in Hpa-infected cells prior to encasement. The transmembrane domain and cytoplasmic tail of PDLP1 are sufficient to convey this localization. PDLP1 also associates with the developing encasement but this association is lost when encasements are fully mature. We found that the pdlp1,2,3 triple mutant is more susceptible to Hpa while overexpression of PDLP1 enhances plant resistance, suggesting that PDLPs enhance basal immunity against Hpa. Haustorial encasements are depleted in callose in pdlp1,2,3 mutant plants whereas PDLP1 over-expression elevates callose deposition around haustoria and across the cell surface. These data indicate that PDLPs contribute to callose encasement of Hpa haustoria and suggests that the deposition of callose at haustoria may involve similar mechanisms to callose deposition at plasmodesmata.

  15. Enhancement of downy mildew disease resistance in pearl millet by the G_app7 bioactive compound produced by Ganoderma applanatum.

    Science.gov (United States)

    Jogaiah, Sudisha; Shetty, Hunthrike Shekar; Ito, Shin-Ichi; Tran, Lam-Son Phan

    2016-08-01

    Pearl millet (Pennisetum glaucum) stands sixth among the most important cereal crops grown in the semi-arid and arid regions of the world. The downy mildew disease caused by Sclerospora graminicola, an oomycete pathogen, has been recognized as a major biotic constraint in pearl millet production. On the other hand, basidiomycetes are known to produce a large number of antimicrobial metabolites, providing a good source of anti-oomycete agrochemicals. Here, we report the discovery and efficacy of a compound, named G_app7, purified from Ganoderma applanatum on inhibition of growth and development of S. graminicola, as well as the effects of seed treatment with G_app7 on protection of pearl millet from downy mildew. G_app7 consistently demonstrated remarkable effects against S. graminicola by recording significant inhibition of sporangium formation (41.4%), zoospore release (77.5%) and zoospore motility (91%). Analyses of G_app7 compound using two-dimensional nuclear magnetic resonance spectroscopy and liquid chromatography-mass spectrometry revealed its close resemblance to metominostrobin, a derivative of strobilurin group of fungicides. Furthermore, the G_app7 was shown to stably maintain the inhibitory effects at different temperatures between 25 and 80 °C. In addition, the anti-oomycete activity of G_app7 was fairly stable for a period of at least 12 months at 4 °C and was only completely lost after being autoclaved. Seed treatment with G_app7 resulted in a significant increase in disease protection (63%) under greenhouse conditions compared with water control. The identification and isolation of this novel and functional anti-oomycete compound from G. applanatum provide a considerable agrochemical importance for plant protection against downy mildew in an environmentally safe and economical manner. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  16. Live cell imaging of interactions between replicase and capsid protein of Brome mosaic virus using Bimolecular Fluorescence Complementation: implications for replication and genome packaging.

    Science.gov (United States)

    Chaturvedi, Sonali; Rao, A L N

    2014-09-01

    In Brome mosaic virus, it was hypothesized that a physical interaction between viral replicase and capsid protein (CP) is obligatory to confer genome packaging specificity. Here we tested this hypothesis by employing Bimolecular Fluorescent Complementation (BiFC) as a tool for evaluating protein-protein interactions in living cells. The efficacy of BiFC was validated by a known interaction between replicase protein 1a (p1a) and protein 2a (p2a) at the endoplasmic reticulum (ER) site of viral replication. Additionally, co-expression in planta of a bona fide pair of interacting protein partners of p1a and p2a had resulted in the assembly of a functional replicase. Subsequent BiFC assays in conjunction with mCherry labeled ER as a fluorescent cellular marker revealed that CP physically interacts with p2a, but not p1a, and this CP:p2a interaction occurs at the cytoplasmic phase of the ER. The significance of the CP:p2a interaction in BMV replication and genome packaging is discussed. Copyright © 2014 Elsevier Inc. All rights reserved.

  17. Live cell imaging of interactions between replicase and capsid protein of Brome mosaic virus using Bimolecular Fluorescence Complementation: Implications for replication and genome packaging

    International Nuclear Information System (INIS)

    Chaturvedi, Sonali; Rao, A.L.N.

    2014-01-01

    In Brome mosaic virus, it was hypothesized that a physical interaction between viral replicase and capsid protein (CP) is obligatory to confer genome packaging specificity. Here we tested this hypothesis by employing Bimolecular Fluorescent Complementation (BiFC) as a tool for evaluating protein–protein interactions in living cells. The efficacy of BiFC was validated by a known interaction between replicase protein 1a (p1a) and protein 2a (p2a) at the endoplasmic reticulum (ER) site of viral replication. Additionally, co-expression in planta of a bona fide pair of interacting protein partners of p1a and p2a had resulted in the assembly of a functional replicase. Subsequent BiFC assays in conjunction with mCherry labeled ER as a fluorescent cellular marker revealed that CP physically interacts with p2a, but not p1a, and this CP:p2a interaction occurs at the cytoplasmic phase of the ER. The significance of the CP:p2a interaction in BMV replication and genome packaging is discussed. - Highlights: • YFP fusion proteins of BMV p1a and p2a are biologically active. • Self-interaction was observed for p1a, p2a and CP. • CP interacts with p2a but not p1a. • Majority of reconstituted YFP resulting from bona fide fusion protein partners localized on ER

  18. Live cell imaging of interactions between replicase and capsid protein of Brome mosaic virus using Bimolecular Fluorescence Complementation: Implications for replication and genome packaging

    Energy Technology Data Exchange (ETDEWEB)

    Chaturvedi, Sonali; Rao, A.L.N., E-mail: arao@ucr.edu

    2014-09-15

    In Brome mosaic virus, it was hypothesized that a physical interaction between viral replicase and capsid protein (CP) is obligatory to confer genome packaging specificity. Here we tested this hypothesis by employing Bimolecular Fluorescent Complementation (BiFC) as a tool for evaluating protein–protein interactions in living cells. The efficacy of BiFC was validated by a known interaction between replicase protein 1a (p1a) and protein 2a (p2a) at the endoplasmic reticulum (ER) site of viral replication. Additionally, co-expression in planta of a bona fide pair of interacting protein partners of p1a and p2a had resulted in the assembly of a functional replicase. Subsequent BiFC assays in conjunction with mCherry labeled ER as a fluorescent cellular marker revealed that CP physically interacts with p2a, but not p1a, and this CP:p2a interaction occurs at the cytoplasmic phase of the ER. The significance of the CP:p2a interaction in BMV replication and genome packaging is discussed. - Highlights: • YFP fusion proteins of BMV p1a and p2a are biologically active. • Self-interaction was observed for p1a, p2a and CP. • CP interacts with p2a but not p1a. • Majority of reconstituted YFP resulting from bona fide fusion protein partners localized on ER.

  19. Expression Profiling during Arabidopsis/Downy Mildew Interaction Reveals a Highly-Expressed Effector That Attenuates Responses to Salicylic Acid

    Science.gov (United States)

    Asai, Shuta; Caillaud, Marie-Cécile; Furzer, Oliver J.; Ishaque, Naveed; Wirthmueller, Lennart; Fabro, Georgina; Shirasu, Ken; Jones, Jonathan D. G.

    2014-01-01

    Plants have evolved strong innate immunity mechanisms, but successful pathogens evade or suppress plant immunity via effectors delivered into the plant cell. Hyaloperonospora arabidopsidis (Hpa) causes downy mildew on Arabidopsis thaliana, and a genome sequence is available for isolate Emoy2. Here, we exploit the availability of genome sequences for Hpa and Arabidopsis to measure gene-expression changes in both Hpa and Arabidopsis simultaneously during infection. Using a high-throughput cDNA tag sequencing method, we reveal expression patterns of Hpa predicted effectors and Arabidopsis genes in compatible and incompatible interactions, and promoter elements associated with Hpa genes expressed during infection. By resequencing Hpa isolate Waco9, we found it evades Arabidopsis resistance gene RPP1 through deletion of the cognate recognized effector ATR1. Arabidopsis salicylic acid (SA)-responsive genes including PR1 were activated not only at early time points in the incompatible interaction but also at late time points in the compatible interaction. By histochemical analysis, we found that Hpa suppresses SA-inducible PR1 expression, specifically in the haustoriated cells into which host-translocated effectors are delivered, but not in non-haustoriated adjacent cells. Finally, we found a highly-expressed Hpa effector candidate that suppresses responsiveness to SA. As this approach can be easily applied to host-pathogen interactions for which both host and pathogen genome sequences are available, this work opens the door towards transcriptome studies in infection biology that should help unravel pathogen infection strategies and the mechanisms by which host defense responses are overcome. PMID:25329884

  20. A downy mildew effector attenuates salicylic acid-triggered immunity in Arabidopsis by interacting with the host mediator complex.

    Directory of Open Access Journals (Sweden)

    Marie-Cécile Caillaud

    2013-12-01

    Full Text Available Plants are continually exposed to pathogen attack but usually remain healthy because they can activate defences upon perception of microbes. However, pathogens have evolved to overcome plant immunity by delivering effectors into the plant cell to attenuate defence, resulting in disease. Recent studies suggest that some effectors may manipulate host transcription, but the specific mechanisms by which such effectors promote susceptibility remain unclear. We study the oomycete downy mildew pathogen of Arabidopsis, Hyaloperonospora arabidopsidis (Hpa, and show here that the nuclear-localized effector HaRxL44 interacts with Mediator subunit 19a (MED19a, resulting in the degradation of MED19a in a proteasome-dependent manner. The Mediator complex of ∼25 proteins is broadly conserved in eukaryotes and mediates the interaction between transcriptional regulators and RNA polymerase II. We found MED19a to be a positive regulator of immunity against Hpa. Expression profiling experiments reveal transcriptional changes resembling jasmonic acid/ethylene (JA/ET signalling in the presence of HaRxL44, and also 3 d after infection with Hpa. Elevated JA/ET signalling is associated with a decrease in salicylic acid (SA-triggered immunity (SATI in Arabidopsis plants expressing HaRxL44 and in med19a loss-of-function mutants, whereas SATI is elevated in plants overexpressing MED19a. Using a PR1::GUS reporter, we discovered that Hpa suppresses PR1 expression specifically in cells containing haustoria, into which RxLR effectors are delivered, but not in nonhaustoriated adjacent cells, which show high PR1::GUS expression levels. Thus, HaRxL44 interferes with Mediator function by degrading MED19, shifting the balance of defence transcription from SA-responsive defence to JA/ET-signalling, and enhancing susceptibility to biotrophs by attenuating SA-dependent gene expression.

  1. Expression profiling during arabidopsis/downy mildew interaction reveals a highly-expressed effector that attenuates responses to salicylic acid.

    Directory of Open Access Journals (Sweden)

    Shuta Asai

    2014-10-01

    Full Text Available Plants have evolved strong innate immunity mechanisms, but successful pathogens evade or suppress plant immunity via effectors delivered into the plant cell. Hyaloperonospora arabidopsidis (Hpa causes downy mildew on Arabidopsis thaliana, and a genome sequence is available for isolate Emoy2. Here, we exploit the availability of genome sequences for Hpa and Arabidopsis to measure gene-expression changes in both Hpa and Arabidopsis simultaneously during infection. Using a high-throughput cDNA tag sequencing method, we reveal expression patterns of Hpa predicted effectors and Arabidopsis genes in compatible and incompatible interactions, and promoter elements associated with Hpa genes expressed during infection. By resequencing Hpa isolate Waco9, we found it evades Arabidopsis resistance gene RPP1 through deletion of the cognate recognized effector ATR1. Arabidopsis salicylic acid (SA-responsive genes including PR1 were activated not only at early time points in the incompatible interaction but also at late time points in the compatible interaction. By histochemical analysis, we found that Hpa suppresses SA-inducible PR1 expression, specifically in the haustoriated cells into which host-translocated effectors are delivered, but not in non-haustoriated adjacent cells. Finally, we found a highly-expressed Hpa effector candidate that suppresses responsiveness to SA. As this approach can be easily applied to host-pathogen interactions for which both host and pathogen genome sequences are available, this work opens the door towards transcriptome studies in infection biology that should help unravel pathogen infection strategies and the mechanisms by which host defense responses are overcome.

  2. Over-expression of VvWRKY1 in grapevines induces expression of jasmonic acid pathway-related genes and confers higher tolerance to the downy mildew.

    Directory of Open Access Journals (Sweden)

    Chloé Marchive

    Full Text Available Most WRKY transcription factors activate expression of defence genes in a salicylic acid- and/or jasmonic acid-dependent signalling pathway. We previously identified a WRKY gene, VvWRKY1, which is able to enhance tolerance to fungal pathogens when it is overexpressed in tobacco. The present work analyzes the effects of VvWRKY1 overexpression in grapevine. Microarray analysis showed that genes encoding defence-related proteins were up-regulated in the leaves of transgenic 35S::VvWRKY1 grapevines. Quantitative RT-PCR analysis confirmed that three genes putatively involved in jasmonic acid signalling pathway were overexpressed in the transgenic grapes. The ability of VvWRKY1 to trans-activate the promoters of these genes was demonstrated by transient expression in grape protoplasts. The resistance to the causal agent of downy mildew, Plasmopara viticola, was enhanced in the transgenic plants. These results show that VvWRKY1 can increase resistance of grapevine against the downy mildew through transcriptional reprogramming leading to activation of the jasmonic acid signalling pathway.

  3. RXLR and CRN Effectors from the Sunflower Downy Mildew Pathogen Plasmopara halstedii Induce Hypersensitive-Like Responses in Resistant Sunflower Lines

    Science.gov (United States)

    Gascuel, Quentin; Buendia, Luis; Pecrix, Yann; Blanchet, Nicolas; Muños, Stéphane; Vear, Felicity; Godiard, Laurence

    2016-01-01

    Plasmopara halstedii is an obligate biotrophic oomycete causing downy mildew disease on sunflower, Helianthus annuus, an economically important oil crop. Severe symptoms of the disease (e.g., plant dwarfism, leaf bleaching, sporulation and production of infertile flower) strongly impair seed yield. Pl resistance genes conferring resistance to specific P. halstedii pathotypes were located on sunflower genetic map but yet not cloned. They are present in cultivated lines to protect them against downy mildew disease. Among the 16 different P. halstedii pathotypes recorded in France, pathotype 710 is frequently found, and therefore continuously controlled in sunflower by different Pl genes. High-throughput sequencing of cDNA from P. halstedii led us to identify potential effectors with the characteristic RXLR or CRN motifs described in other oomycetes. Expression of six P. halstedii putative effectors, five RXLR and one CRN, was analyzed by qRT-PCR in pathogen spores and in the pathogen infecting sunflower leaves and selected for functional analyses. We developed a new method for transient expression in sunflower plant leaves and showed for the first time subcellular localization of P. halstedii effectors fused to a fluorescent protein in sunflower leaf cells. Overexpression of the CRN and of 3 RXLR effectors induced hypersensitive-like cell death reactions in some sunflower near-isogenic lines resistant to pathotype 710 and not in susceptible corresponding lines, suggesting they could be involved in Pl loci-mediated resistances. PMID:28066456

  4. RXLR and CRN effectors from the sunflower downy mildew pathogen Plasmopara halstedii induce hypersensitive-like responses in resistant sunflower lines

    Directory of Open Access Journals (Sweden)

    Quentin Gascuel

    2016-12-01

    Full Text Available Plasmopara halstedii is an obligate biotrophic oomycete causing downy mildew disease on sunflower, Helianthus annuus, an economically important oil crop. Severe symptoms of the disease (e.g. plant dwarfism, leaf bleaching, sporulation and production of infertile flower strongly impair seed yield. Pl resistance genes conferring resistance to specific P. halstedii pathotypes were located on sunflower genetic map but yet not cloned. They are present in cultivated lines to protect them against downy mildew disease. Among the 16 different P. halstedii pathotypes recorded in France, pathotype 710 is frequently found, and therefore continuously controlled in sunflower by different Pl genes. High-throughput sequencing of cDNA from P. halstedii led us to identify potential effectors with the characteristic RXLR or CRN motifs described in other oomycetes. Expression of six P. halstedii putative effectors, five RXLR and one CRN, was analysed by qRT-PCR in pathogen spores and in the pathogen infecting sunflower leaves and these six effectors were selected for functional analyses. We developed a new method for transient expression in sunflower plant leaves and showed for the first time subcellular localization of P. halstedii effectors fused to a fluorescent protein in sunflower leaf cells. Overexpression of the CRN and of 3 RXLR effectors induced hypersensitive-like cell death reactions in some sunflower near-isogenic lines resistant to pathotype 710 and not in susceptible corresponding lines, suggesting they could be involved in Pl loci-mediated resistances.

  5. An amphipathic alpha-helix controls multiple roles of brome mosaic virus protein 1a in RNA replication complex assembly and function.

    Directory of Open Access Journals (Sweden)

    Ling Liu

    2009-03-01

    Full Text Available Brome mosaic virus (BMV protein 1a has multiple key roles in viral RNA replication. 1a localizes to perinuclear endoplasmic reticulum (ER membranes as a peripheral membrane protein, induces ER membrane invaginations in which RNA replication complexes form, and recruits and stabilizes BMV 2a polymerase (2a(Pol and RNA replication templates at these sites to establish active replication complexes. During replication, 1a provides RNA capping, NTPase and possibly RNA helicase functions. Here we identify in BMV 1a an amphipathic alpha-helix, helix A, and use NMR analysis to define its structure and propensity to insert in hydrophobic membrane-mimicking micelles. We show that helix A is essential for efficient 1a-ER membrane association and normal perinuclear ER localization, and that deletion or mutation of helix A abolishes RNA replication. Strikingly, mutations in helix A give rise to two dramatically opposite 1a function phenotypes, implying that helix A acts as a molecular switch regulating the intricate balance between separable 1a functions. One class of helix A deletions and amino acid substitutions markedly inhibits 1a-membrane association and abolishes ER membrane invagination, viral RNA template recruitment, and replication, but doubles the 1a-mediated increase in 2a(Pol accumulation. The second class of helix A mutations not only maintains efficient 1a-membrane association but also amplifies the number of 1a-induced membrane invaginations 5- to 8-fold and enhances viral RNA template recruitment, while failing to stimulate 2a(Pol accumulation. The results provide new insights into the pathways of RNA replication complex assembly and show that helix A is critical for assembly and function of the viral RNA replication complex, including its central role in targeting replication components and controlling modes of 1a action.

  6. The influence of ligand charge and length on the assembly of Brome mosaic virus derived virus-like particles with magnetic core

    Science.gov (United States)

    Mieloch, Adam A.; Krecisz, Monika; Rybka, Jakub D.; Strugała, Aleksander; Krupiński, Michał; Urbanowicz, Anna; Kozak, Maciej; Skalski, Bohdan; Figlerowicz, Marek; Giersig, Michael

    2018-03-01

    Virus-like particles (VLPs) have sparked a great interest in the field of nanobiotechnology and nanomedicine. The introduction of superparamagnetic nanoparticles (SPIONs) as a core, provides potential use of VLPs in the hyperthermia therapy, MRI contrast agents and magnetically-powered delivery agents. Magnetite NPs also provide a significant improvement in terms of VLPs stability. Moreover employing viral structural proteins as self-assembling units has opened a new paths for targeted therapy, drug delivery systems, vaccines design, and many more. In many cases, the self-assembly of a virus strongly depends on electrostatic interactions between positively charged groups of the capsid proteins and negatively charged nucleic acid. This phenomenon imposes the negative net charge as a key requirement for the core nanoparticle. In our experiments, Brome mosaic virus (BMV) capsid proteins isolated from infected plants Hordeum vulgare were used. Superparamagnetic iron oxide nanoparticles (Fe3O4) with 15 nm in diameter were synthesized by thermal decomposition and functionalized with COOH-PEG-PL polymer or dihexadecylphosphate (DHP) in order to provide water solubility and negative charge required for the assembly. Nanoparticles were characterized by Transmission Electron Microscopy (TEM), Dynamic Light Scattering (DLS), Zeta Potential, Fourier Transformed Infrared Spectroscopy (FTIR) and Superconducting Quantum Interference Device (SQUID) magnetometry. TEM and DLS study were conducted to verify VLPs creation. This study demonstrates that the increase of negative surface charge is not a sufficient factor determining successful assembly. Additional steric interactions provided by longer ligands are crucial for the assembly of BMV SPION VLPs and may enhance the colloidal stability.

  7. The influence of ligand charge and length on the assembly of Brome mosaic virus derived virus-like particles with magnetic core

    Directory of Open Access Journals (Sweden)

    Adam A. Mieloch

    2018-03-01

    Full Text Available Virus-like particles (VLPs have sparked a great interest in the field of nanobiotechnology and nanomedicine. The introduction of superparamagnetic nanoparticles (SPIONs as a core, provides potential use of VLPs in the hyperthermia therapy, MRI contrast agents and magnetically-powered delivery agents. Magnetite NPs also provide a significant improvement in terms of VLPs stability. Moreover employing viral structural proteins as self-assembling units has opened a new paths for targeted therapy, drug delivery systems, vaccines design, and many more. In many cases, the self-assembly of a virus strongly depends on electrostatic interactions between positively charged groups of the capsid proteins and negatively charged nucleic acid. This phenomenon imposes the negative net charge as a key requirement for the core nanoparticle. In our experiments, Brome mosaic virus (BMV capsid proteins isolated from infected plants Hordeum vulgare were used. Superparamagnetic iron oxide nanoparticles (Fe3O4 with 15 nm in diameter were synthesized by thermal decomposition and functionalized with COOH-PEG-PL polymer or dihexadecylphosphate (DHP in order to provide water solubility and negative charge required for the assembly. Nanoparticles were characterized by Transmission Electron Microscopy (TEM, Dynamic Light Scattering (DLS, Zeta Potential, Fourier Transformed Infrared Spectroscopy (FTIR and Superconducting Quantum Interference Device (SQUID magnetometry. TEM and DLS study were conducted to verify VLPs creation. This study demonstrates that the increase of negative surface charge is not a sufficient factor determining successful assembly. Additional steric interactions provided by longer ligands are crucial for the assembly of BMV SPION VLPs and may enhance the colloidal stability.

  8. Detection of Verticillium wilt of olive trees and downy mildew of opium poppy using hyperspectral and thermal UAV imagery

    Science.gov (United States)

    Calderón Madrid, Rocío; Navas Cortés, Juan Antonio; Montes Borrego, Miguel; Landa del Castillo, Blanca Beatriz; Lucena León, Carlos; Jesús Zarco Tejada, Pablo

    2014-05-01

    The present study explored the use of high-resolution thermal, multispectral and hyperspectral imagery as indicators of the infections caused by Verticillium wilt (VW) in olive trees and downy mildew (DM) in opium poppy fields. VW, caused by the soil-borne fungus Verticillium dahliae, and DM, caused by the biotrophic obligate oomycete Peronospora arborescens, are the most economically limiting diseases of olive trees and opium poppy, respectively, worldwide. V. dahliae infects the plant by the roots and colonizes its vascular system, blocking water flow and eventually inducing water stress. P. arborescens colonizes the mesophyll, appearing the first symptoms as small chlorotic leaf lesions, which can evolve to curled and thickened tissues and systemic infections that become deformed and necrotic as the disease develops. The work conducted to detect VW and DM infection consisted on the acquisition of time series of airborne thermal, multispectral and hyperspectral imagery using 2-m and 5-m wingspan electric Unmanned Aerial Vehicles (UAVs) in spring and summer of three consecutive years (2009 to 2011) for VW detection and on three dates in spring of 2009 for DM detection. Two 7-ha commercial olive orchards naturally infected with V. dahliae and two opium poppy field plots artificially infected by P. arborescens were flown. Concurrently to the airborne campaigns, olive orchards and opium poppy fields were assessed "in situ" to assess actual VW severity and DM incidence. Furthermore, field measurements were conducted at leaf and crown level. The field results related to VW detection showed a significant increase in crown temperature (Tc) minus air temperature (Ta) and a decrease in leaf stomatal conductance (G) as VW severity increased. This reduction in G was associated with a significant increase in the Photochemical Reflectance Index (PRI570) and a decrease in chlorophyll fluorescence. DM asymptomatic leaves showed significantly higher NDVI and lower green/red index

  9. The subgenomic promoter of brome mosaic virus folds into a stem-loop structure capped by a pseudo-triloop that is structurally similar to the triloop of the genomic promoter

    DEFF Research Database (Denmark)

    Skov, J.; Gaudin, M.; Podbevsek, P.

    2012-01-01

    In brome mosaic virus, both the replication of the genomic (+)-RNA strands and the transcription of the subgenomic RNA are carried out by the viral replicase. The production of (-)-RNA strands is dependent on the formation of an AUA triloop in the stem-loop C (SLC) hairpin in the 3'-untranslated...... region of the (+)-RNA strands. Two alternate hypotheses have been put forward for the mechanism of subgenomic RNA transcription. One posits that transcription commences by recognition of at least four key nucleotides in the subgenomic promoter by the replicase. The other posits that subgenomic...... transcription starts by binding of the replicase to a hairpin formed by the subgenomic promoter that resembles the minus strand promoter hairpin SLC. In this study, we have determined the three-dimensional structure of the subgenomic promoter hairpin using NMR spectroscopy. The data show that the hairpin...

  10. Host Jumps and Radiation, Not Co‐Divergence Drives Diversification of Obligate Pathogens. A Case Study in Downy Mildews and Asteraceae

    Science.gov (United States)

    Choi, Young-Joon; Thines, Marco

    2015-01-01

    Even though the microevolution of plant hosts and pathogens has been intensely studied, knowledge regarding macro-evolutionary patterns is limited. Having the highest species diversity and host-specificity among Oomycetes, downy mildews are a useful a model for investigating long-term host-pathogen coevolution. We show that phylogenies of Bremia and Asteraceae are significantly congruent. The accepted hypothesis is that pathogens have diverged contemporarily with their hosts. But maximum clade age estimation and sequence divergence comparison reveal that congruence is not due to long-term coevolution but rather due to host-shift driven speciation (pseudo-cospeciation). This pattern results from parasite radiation in related hosts, long after radiation and speciation of the hosts. As large host shifts free pathogens from hosts with effector triggered immunity subsequent radiation and diversification in related hosts with similar innate immunity may follow, resulting in a pattern mimicking true co-divergence, which is probably limited to the terminal nodes in many pathogen groups. PMID:26230508

  11. Disentangling Peronospora on Papaver: Phylogenetics, Taxonomy, Nomenclature and Host Range of Downy Mildew of Opium Poppy (Papaver somniferum) and Related Species

    Science.gov (United States)

    Voglmayr, Hermann; Montes-Borrego, Miguel; Landa, Blanca B.

    2014-01-01

    Based on sequence data from ITS rDNA, cox1 and cox2, six Peronospora species are recognised as phylogenetically distinct on various Papaver species. The host ranges of the four already described species P. arborescens, P. argemones, P. cristata and P. meconopsidis are clarified. Based on sequence data and morphology, two new species, P. apula and P. somniferi, are described from Papaver apulum and P. somniferum, respectively. The second Peronospora species parasitizing Papaver somniferum, that was only recently recorded as Peronospora cristata from Tasmania, is shown to represent a distinct taxon, P. meconopsidis, originally described from Meconopsis cambrica. It is shown that P. meconopsidis on Papaver somniferum is also present and widespread in Europe and Asia, but has been overlooked due to confusion with P. somniferi and due to less prominent, localized disease symptoms. Oospores are reported for the first time for P. meconopsidis from Asian collections on Papaver somniferum. Morphological descriptions, illustrations and a key are provided for all described Peronospora species on Papaver. cox1 and cox2 sequence data are confirmed as equally good barcoding loci for reliable Peronospora species identification, whereas ITS rDNA does sometimes not resolve species boundaries. Molecular phylogenetic data reveal high host specificity of Peronospora on Papaver, which has the important phytopathological implication that wild Papaver spp. cannot play any role as primary inoculum source for downy mildew epidemics in cultivated opium poppy crops. PMID:24806292

  12. Dynamika przyrostu masy i produktywność stokłosy bezostnej i stokłosy uniolowatej przy zróżnieowanym nawożeniu azotem w doświadczeniu polowym. Cz. II. Jakość plonu [Dynamics of mass increase and productivity of smooth brome grass and rescue grass with different nitrogen fertilization in field experiments. Part II. Quality of yield

    Directory of Open Access Journals (Sweden)

    Henryk Skrabka

    2015-06-01

    Full Text Available The contents of protein, amino acids, reducing sugars, fibre (ADF, lignin (ADL and mineral components in tissues of smooth brome grass – Bromus inermis and rescue grass – Bromus unioloides were determined. The purpose of this investigation was to compare the nutritive value of either species of grass.

  13. Dynamika przyrostu masy i produktywność stokłosy bezostnej i stokłosy uniolowatej przy zróżnicowanym nawożeniu azotem w doświadczeniu polowym. Cz. I. Wskaźniki produktywności i plony [Dynamics of mass increase and productivity of smooth brome grass and rescue grass with different nitrogen fertilization in field experiments. Part I. Indexes of productivity and yields

    Directory of Open Access Journals (Sweden)

    Henryk Skrabka

    2015-06-01

    Full Text Available On the basis of daily dry weight increment and assimilation area of the investigated plants the production indexes NAR, LAI and CGR and yields of dry weight were calculated for three years. The comparison of indexes and yields showed that the dynamics and mass increment of rescue grass are higher that those of smooth brome grass.

  14. Inbreeding, Genetic Variation, and Invasiveness: The Strange Case of Bromus tectorum

    Science.gov (United States)

    Susan E. Meyer; Elizabeth A. Leger

    2010-01-01

    Cheatgrass (Bromus tectorum, downy brome) is arguably the most common plant in the western United States, dominating literally millions of acres of degraded rangeland; yet it is a relative newcomer, having arrived on the scene only a little over a century ago. It first entered the West as an unknown but probably small number of seeds in contaminated grain or packing...

  15. Bromus tectorum L. invasion: Changes in soil properties and rates of bioturbation

    Science.gov (United States)

    Bromus tectorum (cheatgrass, downy brome), an exotic annual grass of Eurasian origin, has replaced native Artemisia/bunchgrass communities on millions of hectares throughout the Intermountain West. Using Jenny’s (1941) framework that specific vegetation can differentially affect soil development; we...

  16. Evidence for resistance polymorphism in the Bromus tectorum/Ustilago bullata pathosystem: implications for biocontrol

    Science.gov (United States)

    S. E. Meyer; D. L. Nelson; S. Clement

    2001-01-01

    Bromus tectorum L. (cheatgrass or downy brome) is an important exotic weed in natural ecosystems as well as in winter cereal cropland in semiarid western North America. The systemic, seedling-infecting head smut pathogen Ustilago bullata Berk. commonly infects cheatgrass stands, often at epidemic levels. We examined factors...

  17. Competition for soil nitrate and invasive weed resistance of three shrub-steppe growth forms

    Science.gov (United States)

    Eamonn D. Leonard

    2007-01-01

    Determining mechanisms responsible for weed resistance and invasion success are two issues that have potential in aiding successful land management decisions. The first experiment evaluates the competitive effects of an invasive annual grass downy brome (Bromus tectorum L.), an invasive biennial forb dyer's woad (Isatis tinctoria...

  18. Community ecology of fungal pathogens on Bromus tectorum [Chapter 7

    Science.gov (United States)

    Susan E. Meyer; Julie Beckstead; JanaLynn Pearce

    2016-01-01

    Bromus tectorum L. (cheatgrass or downy brome) presents a rich resource for soil microorganisms because of its abundant production of biomass, seeds, and surface litter. Many of these organisms are opportunistic saprophytes, but several fungal species regularly found in B. tectorum stands function as facultative or obligate pathogens. These organisms interact...

  19. Ecological significance of microsatellite variation in western North American populations of Bromus tectorum

    Science.gov (United States)

    Alisa P. Ramakrishnan; Susan Meyer; Daniel J. Fairbanks; Craig E. Coleman

    2006-01-01

    Bromus tectorum (cheatgrass or downy brome) is an exotic annual weed that is abundant in western USA. We examined variation in six microsatellite loci for 17 populations representing a range of habitats in Utah, Idaho, Nevada and Colorado (USA) and then intensively sampled four representative populations, for a total sample size of approximately 1000 individuals. All...

  20. Ecological genetics of floret mass variation in Bromus tectorum (Poaceae)

    Science.gov (United States)

    Susan E. Meyer

    2010-01-01

    Bromus tectorum L. (cheatgrass, downy brome) is a highly invasive inbreeding annual grass that dominates millions of hectares of former shrubland in interior western North America. Factors contributing to its success include strong genetic regulation of key adaptive traits coupled with high phenotypic plasticity in response to resource availability (Meyer and Allen...

  1. Does Fusarium-caused seed mortality contribute to Bromus tectorum stand failure in the Great Basin?

    Science.gov (United States)

    S. E. Meyer; J.-L. Franke; O. W. Baughman; J. Beckstead; B. Geary

    2014-01-01

    Bromus tectorum (cheatgrass, downy brome) is an important invader in western North America, dominating millions of hectares of former semi-arid shrubland. Stand failure or 'die-off' is relatively common in monocultures of this annual grass. The study reported here investigated whether soil-borne pathogens could be causal agents in die-offs. Soils from two die...

  2. A nested-polymerase chain reaction protocol for detection and population biology studies of Peronospora arborescens, the downy mildew pathogen of opium poppy, using herbarium specimens and asymptomatic, fresh plant tissues.

    Science.gov (United States)

    Montes-Borrego, Miguel; Muñoz Ledesma, Francisco J; Jiménez-Díaz, Rafael M; Landa, Blanca B

    2009-01-01

    A sensitive nested-polymerase chain reaction (PCR) protocol was developed using either of two primer pairs that improves the in planta detection of Peronospora arborescens DNA. The new protocol represented an increase in sensitivity of 100- to 1,000-fold of detection of the oomycete in opium poppy tissue compared with the detection limit of single PCR using the same primer pairs. The new protocol allowed amplification of 5 to 0.5 fg of Peronospora arborescens DNA mixed with Papaver somniferum DNA. The protocol proved useful for amplifying Peronospora arborescens DNA from 96-year-old herbarium specimens of Papaver spp. and to demonstrate that asymptomatic, systemic infections by Peronospora arborescens can occur in wild Papaver spp. as well as in cultivated opium poppy. Also, the increase in sensitivity of the protocol made possible the detection of seedborne Peronospora arborescens in commercial opium poppy seed stocks in Spain with a high frequency, which poses a threat for pathogen spread. Direct sequencing of purified amplicons allowed alignment of a Peronospora arborescens internal transcribed spacer (ITS) ribosomal DNA (rDNA) sequence up to 730-bp long when combining the sequences obtained with the two primer sets. Maximum parsimony analysis of amplified Peronospora arborescens ITS rDNA sequences from specimens of Papaver dubium, P. hybridum, P. rhoeas, and P. somniferum from different countries indicated for the first time that a degree of host specificity may exist within populations of Peronospora arborescens. The reported protocol will be useful for epidemiological and biogeographical studies of downy mildew diseases as well as to unravel misclassification of Peronospora arborescens and Peronospora cristata, the reported causal agents of the opium poppy downy mildew disease.

  3. The pearl millet mitogen-activated protein kinase PgMPK4 is involved in responses to downy mildew infection and in jasmonic- and salicylic acid-mediated defense.

    Science.gov (United States)

    Melvin, Prasad; Prabhu, S Ashok; Veena, Mariswamy; Shailasree, Sekhar; Petersen, Morten; Mundy, John; Shetty, Shekar H; Kini, K Ramachandra

    2015-02-01

    Plant mitogen-activated protein kinases (MPKs) transduce signals required for the induction of immunity triggered by host recognition of pathogen-associated molecular patterns. We isolated a full-length cDNA of a group B MPK (PgMPK4) from pearl millet. Autophosphorylation assay of recombinant PgMPK4 produced in Escherichia coli confirmed it as a kinase. Differential accumulation of PgMPK4 mRNA and kinase activity was observed between pearl millet cultivars 852B and IP18292 in response to inoculation with the downy mildew oomycete pathogen Sclerospora graminicola. This increased accumulation of PgMPK4 mRNA, kinase activity as well as nuclear-localization of PgMPK protein(s) was only detected in the S. graminicola resistant cultivar IP18292 with a ~tenfold peak at 9 h post inoculation. In the susceptible cultivar 852B, PgMPK4 mRNA and immuno-detectable nuclear PgMPK could be induced by application of the chemical elicitor β-amino butyric acid, the non-pathogenic bacteria Pseudomonas fluorescens, or by the phytohormones jasmonic acid (JA) or salicylic acid (SA). Furthermore, kinase inhibitor treatments indicated that PgMPK4 is involved in the JA- and SA-mediated expression of three defense genes, lipoxygenase, catalase 3 and polygalacturonase-inhibitor protein. These findings indicate that PgMPK/s contribute to pearl millet defense against the downy mildew pathogen by activating the expression of defense proteins.

  4. Development and dissection of diagnostic SNP markers for the downy mildew resistance genes Pl Arg and Pl 8 and maker-assisted gene pyramiding in sunflower (Helianthus annuus L.).

    Science.gov (United States)

    Qi, L L; Talukder, Z I; Hulke, B S; Foley, M E

    2017-06-01

    Diagnostic DNA markers are an invaluable resource in breeding programs for successful introgression and pyramiding of disease resistance genes. Resistance to downy mildew (DM) disease in sunflower is mediated by Pl genes which are known to be effective against the causal fungus, Plasmopara halstedii. Two DM resistance genes, Pl Arg and Pl 8 , are highly effective against P. halstedii races in the USA, and have been previously mapped to the sunflower linkage groups (LGs) 1 and 13, respectively, using simple sequence repeat (SSR) markers. In this study, we developed high-density single nucleotide polymorphism (SNP) maps encompassing the Pl arg and Pl 8 genes and identified diagnostic SNP markers closely linked to these genes. The specificity of the diagnostic markers was validated in a highly diverse panel of 548 sunflower lines. Dissection of a large marker cluster co-segregated with Pl Arg revealed that the closest SNP markers NSA_007595 and NSA_001835 delimited Pl Arg to an interval of 2.83 Mb on the LG1 physical map. The SNP markers SFW01497 and SFW06597 delimited Pl 8 to an interval of 2.85 Mb on the LG13 physical map. We also developed sunflower lines with homozygous, three gene pyramids carrying Pl Arg , Pl 8 , and the sunflower rust resistance gene R 12 using the linked SNP markers from a segregating F 2 population of RHA 340 (carrying Pl 8 )/RHA 464 (carrying Pl Arg and R 12 ). The high-throughput diagnostic SNP markers developed in this study will facilitate marker-assisted selection breeding, and the pyramided sunflower lines will provide durable resistance to downy mildew and rust diseases.

  5. Reaction of melon genotypes to the gummy stem blight and the downy mildew Reação de genótipos de melão ao crestamento gomoso e ao míldio

    Directory of Open Access Journals (Sweden)

    Gil R dos Santos

    2009-06-01

    Full Text Available The gummy stem blight (Didymella bryoniae and the downy mildew (Pseudoperonospora cubensis are two foremost melon (Cucumis melo diseases, considering their effects on yield and fruit quality. Despite the importance of such diseases, relatively few studies have been done so far on the identification of resistance sources to D. bryoniae and P. cubensis in Brazil. This work aimed at evaluating the resistance of commercial melon genotypes to the gummy stem blight and the downy mildew. Firstly, the most aggressive and representative D. bryoniae isolate was selected. Subsequently, the resistance of 86 melon genotypes to stem infection was studied upon greenhouse conditions by inoculating with the previously selected isolate. Afterwards, the resistance to mildew and leaf infection by D. bryoniae of 28 melon genotypes was evaluated in the field, under natural infection. In the greenhouse, all 86 melon genotypes were infected and showed stem infection symptoms caused by D. bryoniae four days after inoculation. Nevertheless, a significant variation on the resistance levels of the melon genotypes was found. Under field conditions and natural inoculation, genotypes Taslaki and Sary Juliabi were the most susceptible to leaf infection by D. bryoniae, significantly differing from the other genotypes. The lowest levels of susceptibility were identified in genotypes Perlita Busle S1, Valenciano Elíptico, Glaver, MR1, and 2526. All genotypes were susceptible to the downy mildew, albeit differing in susceptibility levels.O crestamento gomoso do caule (Didymella bryoniae e o míldio (Pseudoperonospora cubensis estão entre as principais doenças do meloeiro (Cucumis melo ocasionando redução da produtividade e da qualidade dos frutos. Apesar da importância dessas doenças, são poucos os trabalhos envolvendo a identificação de fontes de resistência a D. bryoniae e a P. cubensis no Brasil. O objetivo deste trabalho foi avaliar a resistência de gen

  6. Adubação nitrogenada e potássica de bromeliáceas cultivadas em fibra de coco e esterco bovino Nitrogen and potassium fertilization of Bromeliaceae grown in coconut fiber and cattle manure

    Directory of Open Access Journals (Sweden)

    Tatiana L do Amaral

    2009-09-01

    Full Text Available Neste trabalho objetivou-se avaliar o efeito de doses de nitrogênio e de potássio no crescimento e teor foliar de nutrientes de quatro bromeliáceas comerciais e propor uma formulação de adubação adequada para cada planta estudada. O experimento foi em esquema fatorial (4 x 4, sendo quatro doses de nitrogênio (0; 375; 562,6 e 750 mg de N L-1 e quatro doses de potássio (0; 468,8; 703,2 e 937,6 mg de K L-1, em delineamento em blocos ao acaso, com quatro repetições para Aechmea blanchetiana e Neoregelia 'Sheba' e três repetições para Orthophytum gurkenii e Vriesea gigantea, duas plantas por parcela. As mudas de Aechmea blanchetiana e Neoregelia 'Sheba' foram cultivadas em substrato composto por 50% de fibra de coco + 50% de esterco bovino; as de Orthophytum gurkenii e Vriesea gigantea, em 100% de fibra de coco. As doses de nitrogênio 0; 375; 562,6 e 750 mg de N L-1 e potássio 0; 468,8; 703,2 e 937,6 mg de K L-1 no substrato correspondem, respectivamente, a 0; 187,5; 281,3 e 375 mg N/planta e 0; 234,4; 351,6 e 468,8 mg K/planta. A adubação fosfatada foi fixa, 50 mg de P L-1 no substrato, correspondendo a 25 mg P/planta, exceto para Neoregelia 'Sheba', que foi inoculada com 25 mL/vaso do inóculo micorrízico misto (Glomus geosporum, Acaulospora laevis, Acaulospora mellea e não recebeu adubação fosfatada. A adubação com 305,1 mg N/planta foi a que proporcionou maior incremento na altura de Aechmea blanchetiana. Em Orthophytum gurkenii; a adubação com 250 mg N/planta proporcionou o maior número de folhas e o maior diâmetro da roseta. As adubações nitrogenada e potássica não beneficiaram o crescimento das plantas de Vriesea gigantea. Em Neoregelia 'Sheba', a dose de 315 mg N/planta causou maior incremento em altura e diâmetro da roseta.Levels of nitrogen and potassium fertilization were evaluated on leaf nutrient contents of four commercial bromeliads, to recommend a suitable fertilization formula for each kind of plant

  7. Incidência do míldio em cebola sob adubação mineral e orgânica Incidence of downy mildew in onion growing under mineral and organic fertilization

    Directory of Open Access Journals (Sweden)

    Paulo Antônio de S. Gonçalves

    2004-09-01

    Full Text Available Analisou-se a relação entre adubação mineral e orgânica sobre a incidência de míldio (Peronospora destructor em cebola (Allium cepa. O trabalho constituiu-se de dois experimentos localizados em Ituporanga, conduzidos entre agosto e dezembro de 1998. O experimento 1, com fontes orgânicas, constou dos tratamentos: esterco de suínos, esterco de aves, composto, esterco de peru e húmus, na dosagem de 75 kg/ha de N; esterco de suínos, na dosagem de 37,5 kg/ha de N; adubação mineral, 30-120-60 kg/ha de N-P2O5-K2O; 60-240-120 kg/ha de N-P2O5-K2O e testemunha sem adubação. O experimento 2 constou dos tratamentos: fontes minerais, 30-120-60 kg/ha de N-P2O5-K2O; 90-360-180 kg/ha de N-P2O5-K2O; 75 kg/ha de N; 225 kg/ha de N; 80 kg/ha de P2O5; 240 kg/ha de P2O5; 60 kg/ha de K2O; 180 kg/ha de K2O; esterco de suínos + fosfato natural, em três combinações, 7,9+0,1, 15,7+0,2 e 47,2+0,6 t/ha, respectivamente; testemunha sem adubação. Não houve diferença entre as fontes mineral e orgânica sobre a incidência de míldio. A relação entre nutrientes e doença foi variável entre datas de amostragem e distinta para fontes minerais e orgânicas.The incidence of downy mildew, Peronospora destructor Berk. Casp., in onion growing in chemical and organic fertilized plots was evaluated in Ituporanga, Santa Catarina State, Brazil. Two experiments were carried out between August to December 1998. The treatments in the first experiment with organic sources were: 75.0 kg/ha of N (swine manure; poultry manure; compost; turkey manure; humus; 37.5 kg/ha of N (swine manure half dose; control (NPK, 30-120-60 kg/ha of N-P2O5-K2O and double rate of NPK (60-240-120 kg/ha of N-P2O5-K2O; and unfertilized control. In mineral fertilization experiment, the mineral levels were 1 and 3 times the recommended rates based on soil analysis: 30-120-60 kg/ha of N-P2O5-k2O; 90-360-180 kg/ha of N-P2O5-K2O; 75.0 kg/ha of N; 225.0 kg/ha of N; 80.0 kg/ha of P2O5; 240.0 kg/ha of

  8. Survival of a Rifampicin-Resistant Pseudomonas fluorescens Strain in Nine Mollisols

    Directory of Open Access Journals (Sweden)

    Tami L. Stubbs

    2014-01-01

    Full Text Available Pseudomonas fluorescens strain D7 (P.f. D7 is a naturally occurring soil bacterium that shows promise as a biological herbicide to inhibit growth of annual grass weeds, including downy brome (Bromus tectorum L., in crop- and rangelands. Pseudomonas fluorescens strain D7rif (P.f. D7rif is a rifampicin-resistant strain of P.f. D7. One of the greatest obstacles to successful biological weed control is survival of the organism under field conditions. Nine soils in the taxonomic order of Mollisols, collected from downy brome-infested areas of the Western and Central United States, were inoculated with P.f. D7rif and incubated in the laboratory to determine the effects of soil type, soil properties, incubation temperature, and soil water potential on survival of P.f. D7rif over 63 days. Silt loam soils from Lind, Washington, and Moro, Oregon, sustained the highest P.f. D7rif populations, and recovery was the lowest from Pendleton, Oregon soil. Survival and recovery of P.f. D7rif varied with soil type and temperature but not with the two soil water potentials tested. After 63 days, P.f. D7rif was recovered at levels greater than log 5.5 colony forming units (CFU g−1 soil from five of the nine test soils, a level adequate to suppress downy brome under field or range conditions.

  9. Diversidade de bromeliáceas epífitas na Área de Proteção Ambiental Ilha do Combu, Belém, Pará, Brasil Diversity of epiphytic bromeliads in the environmental protection area of Combu Island, Belém, Pará, Brazil

    Directory of Open Access Journals (Sweden)

    Adriano Costa Quaresma

    2012-06-01

    Full Text Available Informações sobre a diversidade no nível de espécie oferecem subsídios importantes para o desenvolvimento sustentável e a conservação biológica. Neste contexto, estudos com Bromeliaceae merecem destaque, especialmente porque o grupo é importante ecologicamente, mas ainda pouco conhecido na Região Norte. Neste trabalho, foram demarcadas duas parcelas de 100 m x 100 m em uma floresta de várzea localizada na Área de Proteção Ambiental Ilha do Combu, em Belém, Estado do Pará. Cada parcela foi subdividida em oito parcelas de 50 m x 50 m, tendo todas as espécies e espécimes de bromeliáceas epífitas registradas e quantificadas. A diversidade do grupo foi calculada utilizando o índice de Shannon-Wiener. Foram registrados 1.339 indivíduos pertencentes a oito espécies e quatro gêneros. Tillandsia e Aechmea apresentaram maior riqueza. A diversidade de espécies na área foi de H= 1,10, apresentando dominância acentuada de muitos indivíduos em poucas espécies.Information about diversity at the species level offers data for sustainable development and biological conservation. In this context, studies about Bromeliaceae are noteworthy, especially because this group is ecologically important and poorly known in the North Region of Brazil. In this study, two grids (100 m x 100 m were delineated in a floodplain forest in the environmental protection area of Combu Island, Belém, Pará, Brazil. The grids were subdivided into eight grids of 50 m x 50 m, and all species and individuals of epiphytic Bromeliaceae were recorded and quantified. The diversity was calculated using the Shannon-Wiener index. A total of 1,339 individuals, belonging to eight species and four genera were recorded. Tillandsia and Aechmea presented the greatest richness. The diversity of species was H= 1.10, presenting sharp dominance of many individuals of few species.

  10. AFLP studies on downy-mildew-resistant and downy-mildew ...

    Indian Academy of Sciences (India)

    the chloroplast preparation was free of mitochondria that re- quire a centrifugation at 12000 ... The present study describes the detection of inherited DNA markers in reciprocal F1 .... maternal inheritance of cpDNA in opium poppy. However,.

  11. Annual brome control using a native fungal seed pathogen

    Science.gov (United States)

    Susan E. Meyer; Suzette Clement; Julie Beckstead

    2013-01-01

    Formulations having a selective, mycoherbicide activity for killing ungerminated seeds of invasive grass species are provided. An agricultural, mycoherbicide formulation is taught for killing ungerminated seeds of invasive grass species. The formulations can comprise, for example, a slow-growing strain of Pyrenophora semeniperda, a fast-growing strain of Pyrenophora...

  12. Preparation of bromine fluoride; Preparation du fluorure de brome

    Energy Technology Data Exchange (ETDEWEB)

    Domange, Pr; Duflo, J.

    1958-05-15

    This note addresses the preparation of bromine fluoride. It indicates the implemented process for the reaction, used products (fluorine and bromine), and column characteristics. It describes the operating mode. Apparatus drawing is provided.

  13. Bromeliáceas notables de colombia, iii

    OpenAIRE

    Smith, Lyman B.

    2012-01-01

    Aechmea (Platyaechmea) anómala / Greigia excerta / Guzmania coriostachya / Guzmania cryptantha / Guzmania gloriosa / Pitcairnia alborubra / Pitcairnia bella / Pitcairnia oblanceolata / Pitcairnia Schultzei / Pitcairnia semaphora / Tillandsia chontalensis / Tillandsia disticha / Tillandsia excavata / Tillandsia Funckiana / Tillandsia Gardneri / Tillandsia (Platystachys) mima / Tillandsia rectiflora

  14. Bromeliáceas Notables de Colombia, III

    Directory of Open Access Journals (Sweden)

    Smith Lyman B.

    1945-04-01

    Full Text Available Aechmea (Platyaechmea anómala / Greigia excerta / Guzmania coriostachya / Guzmania cryptantha / Guzmania gloriosa / Pitcairnia alborubra / Pitcairnia bella / Pitcairnia oblanceolata / Pitcairnia Schultzei / Pitcairnia semaphora / Tillandsia chontalensis / Tillandsia disticha / Tillandsia excavata / Tillandsia Funckiana / Tillandsia Gardneri / Tillandsia (Platystachys mima / Tillandsia rectiflora

  15. Germination and growth of native and invasive plants on soil associated with biological control of tamarisk (Tamarix spp.)

    Science.gov (United States)

    Sherry, Rebecca A.; Shafroth, Patrick B.; Belnap, Jayne; Ostoja, Steven M.; Reed, Sasha C.

    2016-01-01

    Introductions of biocontrol beetles (tamarisk beetles) are causing dieback of exotic tamarisk in riparian zones across the western United States, yet factors that determine plant communities that follow tamarisk dieback are poorly understood. Tamarisk-dominated soils are generally higher in nutrients, organic matter, and salts than nearby soils, and these soil attributes might influence the trajectory of community change. To assess physical and chemical drivers of plant colonization after beetle-induced tamarisk dieback, we conducted separate germination and growth experiments using soil and litter collected beneath defoliated tamarisk trees. Focal species were two common native (red threeawn, sand dropseed) and two common invasive exotic plants (Russian knapweed, downy brome), planted alone and in combination. Nutrient, salinity, wood chip, and litter manipulations examined how tamarisk litter affects the growth of other species in a context of riparian zone management. Tamarisk litter, tamarisk litter leachate, and fertilization with inorganic nutrients increased growth in all species, but the effect was larger on the exotic plants. Salinity of 4 dS m−1 benefitted Russian knapweed, which also showed the largest positive responses to added nutrients. Litter and wood chips generally delayed and decreased germination; however, a thinner layer of wood chips increased growth slightly. Time to germination was lengthened by most treatments for natives, was not affected in exotic Russian knapweed, and was sometimes decreased in downy brome. Because natives showed only small positive responses to litter and fertilization and large negative responses to competition, Russian knapweed and downy brome are likely to perform better than these two native species following tamarisk dieback.

  16. Aplicação foliar de tratamentos para o controle do míldio e da podridão-de-escamas de bulbos de cebola Foliar spray of treatments in the control of downy mildew and bulb rot in onion

    Directory of Open Access Journals (Sweden)

    João Américo Wordell Filho

    2007-12-01

    Full Text Available Em experimento de campo, avaliou-se o efeito da aplicação foliar de tratamentos para o controle do míldio (Peronospora destructor e da podridão de bulbos (Burkholderia cepacia de cebola: testemunha, clorotalonil/metalaxyl + clorotalonil, fosfito de potássio, fertilizante foliar (03-00-16, N-P-K, calda bordalesa, calda bordalesa/fosfito de potássio, acibenzolar-S-methyl, pulverizados semanalmente; extrato de alga (Ulva fasciata e ulvana, aplicados a cada 7, 14 e 21 dias. Somente a pulverização semanal com fungicidas sintéticos ou com o fertilizante (03-00-16; 400 mL de p.c./100 L foi capaz de reduzir significativamente a severidade do míldio, em 60 ou 23%, respectivamente, em relação à testemunha não pulverizada, sem aumentar o rendimento de bulbos. O tratamento com fertilizantes ricos em potássio resultou em maior incidência da podridão de bulbos armazenados por cinco meses. O conteúdo de açúcares solúveis e incidência da podridão de bulbos de cebola foram correlacionados significativamente (-0,629, p A field experiment was carried out to evaluate the effect of foliar sprays with the following treatments on the downy mildew (Peronospora destructor and bulb rot (Burkholderia cepacia in onions: non-treated control, fungicide chlorotalonil/metalaxyl + chlorotalonil, potassium phosphite, foliar fertilizer (03-00-16, N-P-K, bordeaux mixture, bordeaux mixture/potassium phosphite, acibenzolar-S-methyl weekly applied; extract of alga Ulva fasciata and ulvan sprayed every 7, 14 and 21 days. Only the weekly spraying of fungicides and fertilizer (03-00-16, 400 mL/100 L significantly reduced the mildew severity by 60 and 23%, respectively, but did not increase the bulb yield. The foliar application of potassium rich fertilizers resulted in a higher incidence of rotten bulbs after 5 months in storage. Soluble sugar content and rot incidence of onion bulbs were significantly correlated (-0,629, p < 0,05.

  17. Method of obtaining concentrated preparations of Cl{sup 36} and Br{sup 82} by recoil nuclei under exposure to high-density neutron fields; Preparation de composes du chlore-36 et du brome-82 de haute activite specifique, par exposition de noyaux de recul a des champs neutroniques intenses; Poluchenie kontsentrirovannykh preparatov Cl{sup 36} i Br{sup 82} metodom yader otdachi pri obluchenii v nejtronnykh polyakh vysokoj plotnosti; Obtencion de compuestos de cloro-36 y de bromo-82 de alta actividad especifica por retroceso de nucleos en campos neutronicos intensos

    Energy Technology Data Exchange (ETDEWEB)

    Kurchatova, L N; Kurchatov, B V

    1962-01-15

    number of processes: formation of radioactive chlorine atoms, radiolytic detachment of the halide, diffusion of the products in the carbon lattice, their absorption on the surface, and their recombination at various centres. Many factors, such as the ultramicroscopio structure; the nature of the new compounds, related in type to the surface compounds; the presence on the carbon surface of centres with a continuous sorption energy spectrum; the probable formation, through carbon irradiation, of various stationary recombination centres, and others, constitute an extraordinary variety of conditions for the formation and interaction of irradiation products with the carbon skeleton and surface. Therefore these systems open the way to a wide range of experiments to select the ideal conditions for enrichment. (author) [French] D'une maniere generale, la methode classique de Szilard-Chalmers pour l'obtention de preparations radioactives concentrees est consideree comme peu efficace lorsqu'on utilise d'importants flux integraux de neutrons, en raison de la 'desintegration considerable du compose sous l'effet des rayonnements. Les auteurs ont trouve des composes de brome et de chlore avec du carbone, qui permettent d'enrichir considerablement le chlore et le brome en radioisotopes par exposition de noyaux de recul a. des flux neutroniques de l'ordre de 10{sup 13} n/cm{sup 2} s. Ces composes repondent a la formule C{sub n}X, X etant du Cl ou du Br et n = 10 a 20 pour les composes du chlore, et 25 a 70 pour les composes du brome. Ces composes sont suffisamment stables aux points de vue thermique et chimique. Le compose C30 Br supporte un echauffement allant jusqu'a 300{sup o}C dans une atmosphere d'argon sans que le brome s'en separe; il se decompose completement a une temperature de 600{sup o}C. Il resiste pratiquement a l'action des reducteurs en solution aqueuse. Les composes de chlore et de carbone sont a peu pres aussi stables que ceux de brome et de carbone. A la temperature

  18. Detecção e variabilidade de Plasmopara halstedii no Brasil e avaliação da resistência de genótipos de girassol ao míldio Detection and variability of Plasmopara halstedii in Brazil and resistance of sunflower genotypes to downy mildew

    Directory of Open Access Journals (Sweden)

    Regina Maria Villas Bôas de Campos Leite

    2007-12-01

    Full Text Available Este trabalho foi conduzido com o objetivo de identificar a raça fisiológica de Plasmopara halstedii que ocorreu em plantas de girassol coletadas no campo experimental da Embrapa Soja, Londrina, PR, em 1998, 2001 e 2002 e avaliar a reação de genótipos de girassol ao míldio. Plântulas de girassol das diferenciadoras de raças e das cultivares foram inoculadas com suspensão de zoosporângios do patógeno e foram plantadas em caixas contendo areia autoclavada. As plântulas foram mantidas em câmara climatizada, com temperatura controlada em 21ºC, por 11 dias. Em seguida, as plantas foram aspergidas intensamente com água destilada, cobertas com saco plástico e mantidas no escuro, a 18ºC. No dia seguinte, foi observada a presença de esporulação nos cotilédones. As plantas que apresentaram esporulação foram consideradas suscetíveis e as sem esporulação foram resistentes. O resultado indicou tratar-se da raça 330 (antiga raça 7 americana, nas três ocasiões. Os genótipos de girassol Embrapa 122, BRS 191 e as cultivares de girassol ornamental BRS Capri M, BRS Encanto M, BRS Oásis, BRS Paixão M, BRS Pesqueiro M, BRS Refúgio M, BRS Saudade M e BRS Saudade U e seus respectivos parentais foram suscetíveis a P. halstedii raça 330. Os genótipos AGROBEL 910, AGROBEL 920, AGROBEL 960, AGROBEL 965, C11, EXP38, M734, M742 e RUMBOSOL 91 foram resistentes à raça 330 do patógeno e podem ser indicados aos agricultores para uso em regiões de risco de ocorrência da doença.This research was carried out for identifying the physiological race of Plasmopara halstedii occurring in sunflower at the experimental field of Embrapa Soybean, Londrina, PR, Brazil, in 1998, 2001 and 2002 by evaluating the reaction of sunflower genotypes inoculated with downy mildew pathogen. Sunflower seedlings of the differentials set to identify races and of the cultivars were inoculated by immersion in zoosporangia suspension and were grown in autoclaved

  19. Application and validation of a warning system for grapevine downy mildew controlusing fungicides Aplicação e validação de um sistema de aviso para o controle do míldio da videira, com fungicidas

    Directory of Open Access Journals (Sweden)

    Erlei Melo Reis

    2013-03-01

    Full Text Available Most warning systems for plant disease control are based on Vinho, in Bento Gonçalves - RS, during the growing seasons 2000/ weather models dependent on the relationships between leaf wetness 01, 2002/03 and 2003/2004, using the grape cultivar Isabel. The duration and mean air temperature in this period considering the conventional system used by local growers was compared with the target disease intensity. For the development of a warning system to new warning system by using different cumulative daily disease severity control grapevine downy mildew, the equation generated by Lalancette values (CDDSV as the criterion to schedule fungicide application and et al. (7 was used. This equation was employed to elaborate a critical reapplication. In experiments conducted in 2003/04, CDDSV of 12 - period table and program a computerized device, which records, though 14 showed promising to schedule the first spraying and the interval electronic sensors, leaf wetness duration, mean temperature in this between fungicide applications, reducing by 37.5% the number of period and automatically calculates the daily value of probability of applications and maintaining the same control efficiency in leaves infection occurrence. The system was validated at Embrapa Uva e and bunches, similarly to the conventional system.A maioria dos sistemas de aviso para o controle de doenças de O sistema foi validado na Embrapa Uva e Vinho, em Bento Gonçalves plantas utilizam como fundamento o modelo climático baseado - RS, conduzido nas safras agrícolas de 2000/01, 2002/03 e 2003/ nas interações entre a duração do molhamento foliar e a 2004 utilizando-se o cultivar Isabel. O sistema convencional utilizado temperatura média nesse período sobre a intensidade da doença pelos produtores foi comparado com o modelo de aviso utilizando alvo. No desenvolvimento de um modelo de aviso para o controle como critério indicador do momento para a aplicação e reaplicação do m

  20. Algumas notas sobre o Brome Mediterrânico do Museu Regional de Lagos

    Directory of Open Access Journals (Sweden)

    Abel VIANA

    2009-10-01

    Full Text Available Reunidos durante varios anos, merce dos esforços de seu Director, que os obteve de ofertas, ou em resultado de pesquisas suas, possui o Museu Regional de Lagos numerosos objectos de certo interesse, cuja divulgaçâo ná será inútil, visto que, além de valerem como elementos de comparacáo, certos ha que constituem pecas pouco vulgares. Demais, todos eles caracterizam a arqueologia do Algarve, em especial a da regiáo do Sacrum Promunturium.

  1. Etude de la fixation d'atomes de brome dans les traces latentes d'ions

    Science.gov (United States)

    Vareille, J. C.; Moliton, J. P.; Decossas, J. L.; Teyssier, J. L.; Delaunay, B.

    1981-09-01

    We show that the branching of bromide atoms is possible on chemically active sites produced by Kr 8+, Cl 6+ and He 2+ ion irradiation on cellulose triacetate. The number of fixed atoms increases with ion fluence and atomic number. These results are in good agreement with those concerning radical yield around the ions' path.

  2. Ruminant urine increases uptake but decreases relative recovery of nitrogen by smooth brome grass

    Science.gov (United States)

    Nitrogen (N) fertilizer application and excreta return may contribute to poor nutrient recovery and use efficiencies in pastures. From 2011-2012, we investigated the effects of ruminant urine input (urine and distilled water control) and N fertilizer rate (0, 40, 80, 120, and 160 lb N/acre) on N res...

  3. Microflora de Bromeliáceas do estado de Pernambuco, Brasil

    Directory of Open Access Journals (Sweden)

    Luis Tavares de Lyra

    1976-01-01

    Full Text Available O autor estudou a microflora de dois gêneros de BROMELIACEAE: Hoenbergia e Portea. As coletas do material foram feitas em seis regiões do Estado de Pernambuco; 1 Região da Mata-Úmida; 2 Região da Mata-Seca; 3 Região do Agreste Central; 4 Região do Agreste Setentrional; 5 Região do Agreste Meridional; 6 Região do Recife. As seguintes diatomáceas indicadoras de águas poluídas (espécies oligossaprobias foram encontradas nas seis regiões estudadas: Gomphonema parvulum (Kutz Grunow., Hantzschia amphioxys Grunow, Pinnularia borealis Ehr., Pinnularia microstauron (Ehr Cleve, gomphonema gracile Ehr., Nitzschia palea Kutz., Melosira roeseana Rabenh., Navicula mutica Kutz., Navicula cryptocephala Kutz., Eunotia pectinalis (Kutz Rabenh. Foram também observadas CHLOROPHYCEAS nas estações chuvosa e seca nas diversas regiões. Algumas são indicadoras de oligossaprobidade: Scenedesmus quadricauda (Turpin brebisson. Chlorococcum sp., Chlorella sp. Os fatores ecológicos e comentários referentes ás diatomáceas foram anotados no texto. A tabela I indica a frequência das diatomáceas nas seis regiões estudadas. Maior número dessas diatomáceas, registramos nas regiões do Agreste. A tabela II mostra a temperatura e pH da água de Hoenbergia e Portea em ambas as estações do ano (inverno e verão. Observamos a ocorrência de larvas de culex em Portea e hoenbergia, entretanto, raramente encontramos larvas de Anopheles. As coletas foram feitas durante as estações chuvosa e seca em Hoenbergia e Portea. Determinamos 35 espécies provenientes de 78 amostras coletadas durante o período de 26 meses.The author studied the microflora from two genera of Bromeliaceae: Hoenbergia and Portea. The material was collected in six natural regions of Pernambuco State: 1 Humid Forest Region; 2 Dry forest region; 3 Central Agreste Region; 4 Setentrional Agreste Region; 5 Meridional Agreste Region; 6 Recife Region. The following diatoms that indicate polluted water (oligosaprobic species have been found in the six Regions studied: Gomphonema parvulum (Kutz Grunow, Hantzschia amphioxys Grunow, Pinnularia borealis Ehr., Pinnularia microstauron (Ehr Cleve, Gomphonema gracile Ehr., Nitzschia palea Kutz., Melosira roeseana Rabenh., Navicula mutica Kutz., Navicula cryptocephala Kutz., Eunotia pectinalis (Kutz Rabenh. Chlorophyceae were also found in samples collected in rainy and dry seasons. some are indicators of oligosaprobic conditions: Sceneaesmus quadricauda (Turpin Brebisson, Chloro coccum sp., Chlorella sp. Ecological factors and comments, concerning diatoms are reported in the text. Most part of diatoms we have reported in the Agreste Regions. Table (I shows the frequency of diatoms in the six Regions studied. Table (II indicates temperature and pH of the water of the bromeliads Hoenbergia and Portea in both seasons of the year (winter and summer. We report the occurence of Culex larvae in Portea and Hoenbergia, however, we also found Anopheles larvae, but they were rarely observed. Collections were made in the rainy and dry seasons in Hoenbergia and Portea. A total of 35 species was determined from 78 samples collected during a period of 26 months.

  4. Smooth brome (Bromus inermis Leyss) response to concrete grinding residue application

    Science.gov (United States)

    Concrete grinding residue (CGR) is a slurry byproduct created by concrete pavement maintenance operations. The application of CGR to roadside soils is not consistently regulated by state agencies across the United States. Much of this variability in regulation may be due to the lack of science-base...

  5. Bromine-82 Labelling of Human Serum Albumin, Insulin and Fibrinogen by Electrochemical Means; Marquage au Brome-82 de la Serum-Albumine Humaine, de l'Insuline et du Fibrinogene par Voie Electrochimique; ЭЛЕКТРОХИМИЧЕСКОЕ МЕЧЕНИЕ ИЗОТОПОМ БРОМА-82 АЛЬБУМИНА ЧЕЛОВЕЧЕСКОЙ СЫВОРОТКИ, ФИБРИНОГЕНА И ИНСУЛИНА; Marcacion de Sueroalbumina Humana, de Insulina y de Fibrinogeno con Bromo-82 por Via Electroquimica

    Energy Technology Data Exchange (ETDEWEB)

    Rosa, U.; Scassellati, G. A.; Pennisi, G. [Centre de Recherches Nucleaires Sorin, Saluggia (Italy)

    1963-03-15

    The authors describe results obtained with a method using bromine-82 to label human serum albumin, fibrinogen and insulin, three organic substances of special importance in diagnostics and biological research. The method involves electrolytic bromination in an aqueous solution; this is performed in an electrolysis cell, whose anodic zone containing the substance to be labelled is partitioned from the cathodic zone by a dialysis membrane. For each of the three substances mentioned, the degree of bromination produced by a direct current (200, 200, 300 x 10{sup -6} A) was studied as a function of anode potential in 10{sup -3} and 10{sup -4} M solutions of NH{sub 4}Br, the amount of bromine-labelled substance formed being checked by radio electrophoresis for various anodic potential values differing from each other by 50 mV. By immuno- electrophoresis it was ascertained that denaturation of albumin and fibrinogen only starts at anodic potential values for which the degree of labelling is already very high as compared with that yielded by chemical methods of labelling. The method here described has the advantage of rapid execution and is well suited to remote handling in a shielded zone. (author) [French] Les auteurs exposent les resultats obtenus par une methode de marquage au brome- 82 de trois substances organiques particulierement interessantes pour l'usage diagnostique et pour la recherche biologique: albumine de serum humain, fibrinogene et insuline. La methode comporte une bromuration electrolytique en solution aqueuse qu'on execute dans une cellule d'electrolyse dont la zone anodique contient la substance a marquer et est cloisonnee par rapport a la zone cathodique par une membrane a dialyse. Pour chacune des trois substances susmentionnees, on a etudie le rendement de bromuration a courant constant (100, 200, 300 * 10{sup -6} A) en fonction du potentiel anodique, en solution 10{sup -3} et 10{sup -4} M de NH{sub 4}Br, en controlant par radioelectrophorese la

  6. Molecular aspects of plant disease susceptibility: Arabidopsis genes affecting downy mildew infection

    NARCIS (Netherlands)

    Lapin, D.

    2013-01-01

    Interactions of plants with pathogenic microorganisms are influenced by multiple biotic and abiotic factors. The host immune system can detect pathogens and restrict their growth and development, but also non-immunity related host factors and processes can contribute to pathogenesis by attracting

  7. Photosynthetic responses of lettuce to downy mildew infection and cytokinin treatment

    Czech Academy of Sciences Publication Activity Database

    Prokopová, J.; Špundová, M.; Sedlářová, M.; Husičková, A.; Novotný, R.; Doležal, Karel; Nauš, J.; Lebeda, A.

    2010-01-01

    Roč. 48, č. 8 (2010), s. 716-723 ISSN 0981-9428 R&D Projects: GA MŠk 1M06030; GA ČR(CZ) GP522/02/D011; GA ČR GD522/08/H003 Institutional research plan: CEZ:AV0Z50380511 Keywords : Bremia lactucae * Benzylaminopurine * Chlorophyll fluorescence imaging Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 2.402, year: 2010

  8. OUTBREAK OF MAIZE DOWNY MILDEW (Sclerophthora macrospora IN SLOVENIA IN 1999

    Directory of Open Access Journals (Sweden)

    Stanislav Trdan

    2000-12-01

    Full Text Available In 1999 a pronounced infection of maize with fungus Sclerophthora macrospora occurred in Slovenia, especially in its north-eastern and eastern regions. Symptoms, typical for infection with this fungus, were found on app. 1800 ha, which means on about 2.5 % of the acreage on which maize is grown. The infected plants were found only on those fields, or parts of those fields, which were flooded for some time soon after sowing or emergence of the crop. The percentage of the plants infected by the fungus was between 5 and 90 %, depending on the type of soil. This article presents different disease causing fungi, their taxonomy, and deals in detail with the species Sclerophthora macrospora, the only disease causing organism under our growing conditions. The article deals with hosts of the fungus, typical symptoms of the disease on maize (“crazy top”, pathogen biology, the mode of infection, its survival under unfavorable conditions, and possible protection against the infection. The article also describes the actual situation in Slovenia, and adds a comment on possible regular occurrences of this disease in future.

  9. Incorporation of temperature and solar radiation thresholds to modify a lettuce downy mildew warning system

    NARCIS (Netherlands)

    Wu, B.M.; Bruggen, van A.H.C.; Subbarao, K.V.; Scherm, H.

    2002-01-01

    The effect of temperature on infection of lettuce by Bremia lactucae was investigated in controlled environment studies and in the field. In controlled conditions, lettuce seedlings inoculated with B. lactucae were incubated at 15, 20, 25, or 30°C during a 4-h wet period immediately after

  10. Leg deformation during imaginal ecdysis in the downy emerald, Cordulia aenea (Odonata, Corduliidae).

    Science.gov (United States)

    Frantsevich, Leonid; Frantsevich, Ludmilla

    2018-04-01

    A dragonfly larva migrates from the water to the shore, perches on a plant stem and grasps it with strongly flexed legs. Adult legs inside the larval exoskeleton fit to the larval legs joint-to-joint. The adult emerges with stretched legs. During the molt, an imaginal leg must follow all the angles in exuvial joints. In turn, larval apodemes are withdrawn from imaginal legs. We visualized transient shapes of the imaginal legs by the instant fixation of insects at different moments of the molt, photographed isolated exuvial legs with the imaginal legs inside and then removed the exuvial sheath. Instant shapes of the imaginal tibia show sharp intrapodomere bends copying the angle in the larval femoro-tibial joint. The site of bending shifts distad during the molt. This is possible if the imaginal leg is pliable. The same problem of leg squeezing is also common in hemimetabolous insects as well as in other arthropods, whereas holometabolous insects overcome problems of a tight confinement either by using leg pliability in other ways but not squeezing (cyclorrhaphan flies, mosquitoes) or by pulling hardened legs out without change of their pupal zigzag configuration (moths, ants, honey bees). The pupal legs are not intended to grasp any external substrate. Copyright © 2018 Elsevier GmbH. All rights reserved.

  11. Ecophysiological characteristics and cadmium accumulation in Downy Oak (Quercus pubescens Willd.

    Directory of Open Access Journals (Sweden)

    Cocozza C

    2012-10-01

    Full Text Available Heavy metals provoke environmental pollution with potentially toxic effects on human and plants systems. Recently, investigations are conducted on plants that may play a relevant role on pollutants absorption or stabilization, focusing on fast growing tree species in agronomic conditions; little is known on the effects of contaminants on tree species colonizing abandoned fields to be used in restoration ecology. The effects of Cd on photosynthetic performance and metal accumulation were investigated in Quercus pubescens Willd. seedlings grown in pots containing a mixture of sand, clay, turf and Cd-treatments (0, 25 and 75 mg kg-1 dry soil. The studied photosynthetic parameters (Asat= net phytosynthesis; Rday= day respiration; Γcomp= CO2 compensation point; Vcmax= maximum carboxylation rate; Jmax = electron transport rate; TPU = triose phosphate use; Ci/Ca = ratio of intercellular (Ci to ambient (Ca [CO2] (Ci/Ca; Jmax/Vcmax = ratio; (gsmax = maximum stomatal conductance; (lg = stomatal conductance estimated relative to the photosynthetic rate; (Fv/Fm = maximum quantum yield of PSII photochemistry; (ΔF/F’m = effective photochemical efficiency varied progressively with increasing Cd concentration in the soil, highlighting a negative impact on photosynthetic potential and PSII functioning. Approximately 10% of added Cd was found to be extractable from the substrate, at the maximum concentration applied, with about 12 and 0.75 as bioaccumulation and translocation factors, respectively. Analogously, Cd accumulated up to 34, 30 and 46 mg kg−1 in leaves, stem and roots, respectively. While it is not possible to extrapolate from the present study with seedlings to effects on mature pine trees, there are clear implications for regeneration in soils contaminated with heavy metals, which may lead to ecosystem deterioration.

  12. Downy mildew of Double Knock Out® rose caused by Peronospora sparsa in Maryland

    Science.gov (United States)

    Roses are one of the most popular and economically important ornamental plants worldwide. In the last 17 years, Knock Out® roses (Rosa x 'Radtko') have been widely used in public and private gardens across the U.S. due to their disease resistance, self-cleaning, drought tolerance and multiple-bloomi...

  13. Skrining Sistematik terhadap Hiperkolesterolemia Familial pada Anak Berdasarkan Kriteria MedPed, Simon Brome Register Register dan Dutch Lipid Clinic

    Directory of Open Access Journals (Sweden)

    Titis Prawitasari

    2016-11-01

    Kesimpulan. Kriteria Dutch Lipid Clinicdapat lebih banyak mendeteksi kemungkinan anak yang mengalami HF berdasarkan riwayat orangtua mengalami penyakit jantung koroner dini dan hiperkolesterolemia dibandingkan kriteria lainnya.

  14. Evaluation of the effectiveness of different herbicides against a new weed Japanese brome (Bromus japonicus Houtt. in wheat crop

    Directory of Open Access Journals (Sweden)

    Muhammad Asghar

    2017-06-01

    Full Text Available A field experiment was conducted to evaluate the efficacy of different post emergence herbicides for the control of monocot weed the Japanese broom (Bromus japonicus in wheat crop. Five herbicides viz., metribuzin, isoproturon, metribuzin plus isoproturon, Atlantis and sulfosulfuron were used at their recommended doses in RCBD with three replications. The weedy check was kept as control where no herbicide was sprayed. All the herbicides were applied as post-emergence after second irrigation at 60 days after sowing the crop. The lowest weed counts per m2 (0.583 and highest percent of weed mortality (99.07% were observed where metribuzin plus isoproturon was used. This was followed by Atlantis with 3.26 weeds per m2 with 95.14% mortality of weeds. However, significantly higher 1000 grain weight was noted with Atlantis (29.50 g and metribuzin plus isoproturon (28.58 g. The treatments did not differ significantly with respect to 1000 grain weight. All the herbicide helped to increase the yield from 16 to 22%, but did not differ significantly with respect to yield gain. The highest yield (3759.40 kg ha-1 was produced by Atlantis followed by sulfosulfuron (3757.20 kg ha-1 . On the basis of cost benefit ratio sulfosulfuron (34.95 proved to be the best followed by metribuzin (16.78. Therefore, sulfosulfuron and metribuzin are recommended for the control of Bromus weed in wheat crop.

  15. Using high-resolution future climate scenarios to forecast Bromus tectorum invasion in Rocky Mountain National Park.

    Science.gov (United States)

    West, Amanda M; Kumar, Sunil; Wakie, Tewodros; Brown, Cynthia S; Stohlgren, Thomas J; Laituri, Melinda; Bromberg, Jim

    2015-01-01

    National Parks are hallmarks of ecosystem preservation in the United States. The introduction of alien invasive plant species threatens protection of these areas. Bromus tectorum L. (commonly called downy brome or cheatgrass), which is found in Rocky Mountain National Park (hereafter, the Park), Colorado, USA, has been implicated in early spring competition with native grasses, decreased soil nitrogen, altered nutrient and hydrologic regimes, and increased fire intensity. We estimated the potential distribution of B. tectorum in the Park based on occurrence records (n = 211), current and future climate, and distance to roads and trails. An ensemble of six future climate scenarios indicated the habitable area of B. tectorum may increase from approximately 5.5% currently to 20.4% of the Park by the year 2050. Using ordination methods we evaluated the climatic space occupied by B. tectorum in the Park and how this space may shift given future climate change. Modeling climate change at a small extent (1,076 km2) and at a fine spatial resolution (90 m) is a novel approach in species distribution modeling, and may provide inference for microclimates not captured in coarse-scale models. Maps from our models serve as high-resolution hypotheses that can be improved over time by land managers to set priorities for surveys and removal of invasive species such as B. tectorum.

  16. Herbicidal Activity of Glucosinolate Degradation Products in Fermented Meadowfoam (Limnanthes alba) Seed Meal

    Science.gov (United States)

    STEVENS, JAN F.; REED, RALPH L.; ALBER, SUSAN; PRITCHETT, LARRY; MACHADO, STEPHEN

    2009-01-01

    Meadowfoam (Limnanthes alba) is an oilseed crop grown in western Oregon. After extraction of the oil from the seeds, the remaining seed meal contains 2-4% of the glucosinolate, glucolimnanthin. We investigated the effect of fermentation of seed meal on its chemical composition and the effect of the altered composition on downy brome (Bromus tectorum) coleoptile emergence. Incubation of enzyme-inactive seed meal with enzyme-active seeds (1% by weight) resulted in complete degradation of glucolimnanthin and formation of 3-methoxybenzyl isothiocyanate in 28% yield. Fermentation in the presence of an aqueous solution of FeSO4 (10 mM) resulted in the formation of 3-methoxyphenylacetonitrile and 2-(3-methoxyphenyl)ethanethioamide, a novel natural product. The formation of the isothiocyanate, the nitrile and the thioamide, as a total, correlated with an increase of herbicidal potency of seed meal (r2 = 0.96). The results of this study open new possibilities for the refinement of glucosinolate-containing seed meals for use as bioherbicides. PMID:19170637

  17. Using High-Resolution Future Climate Scenarios to Forecast Bromus tectorum Invasion in Rocky Mountain National Park

    Science.gov (United States)

    West, Amanda M.; Kumar, Sunil; Wakie, Tewodros; Brown, Cynthia S.; Stohlgren, Thomas J.; Laituri, Melinda; Bromberg, Jim

    2015-01-01

    National Parks are hallmarks of ecosystem preservation in the United States. The introduction of alien invasive plant species threatens protection of these areas. Bromus tectorum L. (commonly called downy brome or cheatgrass), which is found in Rocky Mountain National Park (hereafter, the Park), Colorado, USA, has been implicated in early spring competition with native grasses, decreased soil nitrogen, altered nutrient and hydrologic regimes, and increased fire intensity. We estimated the potential distribution of B. tectorum in the Park based on occurrence records (n = 211), current and future climate, and distance to roads and trails. An ensemble of six future climate scenarios indicated the habitable area of B. tectorum may increase from approximately 5.5% currently to 20.4% of the Park by the year 2050. Using ordination methods we evaluated the climatic space occupied by B. tectorum in the Park and how this space may shift given future climate change. Modeling climate change at a small extent (1,076 km2) and at a fine spatial resolution (90 m) is a novel approach in species distribution modeling, and may provide inference for microclimates not captured in coarse-scale models. Maps from our models serve as high-resolution hypotheses that can be improved over time by land managers to set priorities for surveys and removal of invasive species such as B. tectorum. PMID:25695255

  18. Herbicidal activity of glucosinolate degradation products in fermented meadowfoam ( Limnanthes alba ) seed meal.

    Science.gov (United States)

    Stevens, Jan F; Reed, Ralph L; Alber, Susan; Pritchett, Larry; Machado, Stephen

    2009-03-11

    Meadowfoam ( Limnanthes alba ) is an oilseed crop grown in western Oregon. After extraction of the oil from the seeds, the remaining seed meal contains 2-4% of the glucosinolate glucolimnanthin. This study investigated the effect of fermentation of seed meal on its chemical composition and the effect of the altered composition on downy brome ( Bromus tectorum ) coleoptile emergence. Incubation of enzyme-inactive seed meal with enzyme-active seeds (1% by weight) resulted in complete degradation of glucolimnanthin and formation of 3-methoxybenzyl isothiocyanate in 28% yield. Fermentation in the presence of an aqueous solution of FeSO(4) (10 mM) resulted in the formation of 3-methoxyphenylacetonitrile and 2-(3-methoxyphenyl)ethanethioamide, a novel natural product. The formation of the isothiocyanate, the nitrile, and the thioamide, as a total, correlated with an increase of herbicidal potency of the seed meal (r(2) = 0.96). The results of this study open new possibilities for the refinement of glucosinolate-containing seed meals for use as bioherbicides.

  19. Using high-resolution future climate scenarios to forecast Bromus tectorum invasion in Rocky Mountain National Park.

    Directory of Open Access Journals (Sweden)

    Amanda M West

    Full Text Available National Parks are hallmarks of ecosystem preservation in the United States. The introduction of alien invasive plant species threatens protection of these areas. Bromus tectorum L. (commonly called downy brome or cheatgrass, which is found in Rocky Mountain National Park (hereafter, the Park, Colorado, USA, has been implicated in early spring competition with native grasses, decreased soil nitrogen, altered nutrient and hydrologic regimes, and increased fire intensity. We estimated the potential distribution of B. tectorum in the Park based on occurrence records (n = 211, current and future climate, and distance to roads and trails. An ensemble of six future climate scenarios indicated the habitable area of B. tectorum may increase from approximately 5.5% currently to 20.4% of the Park by the year 2050. Using ordination methods we evaluated the climatic space occupied by B. tectorum in the Park and how this space may shift given future climate change. Modeling climate change at a small extent (1,076 km2 and at a fine spatial resolution (90 m is a novel approach in species distribution modeling, and may provide inference for microclimates not captured in coarse-scale models. Maps from our models serve as high-resolution hypotheses that can be improved over time by land managers to set priorities for surveys and removal of invasive species such as B. tectorum.

  20. First report of Peronospora sp. causing downy mildew disease on Geum sp. in the northeastern United States

    Science.gov (United States)

    Plants in the genus Geum are clump-forming perennials in the family Rosaceae. Known for long bloom times and the ability to attract pollinators, Geum hybrids are popular ornamental plants commonly grown in borders and rock gardens (Brickell & Cathey, 2004). In early April 2017, the entire crop of Ge...

  1. Downy mildew disease of New England aster (Symphyotrichum novae-angliae) caused by Basidiophora simplex in New York

    Science.gov (United States)

    The native perennial New England aster (Symphyotrichum novae-angliae; syn.=Aster novae-anglicae) is ubiquitous throughout most of the United States, as they self-seed and are well-adapted to many environments. New England asters are valued for their prominent dense clusters of purple flowers that at...

  2. Computing Integrated Ratings from Heterogeneous Phenotypic Assessments: A Case Study of Lettuce Postharvest Quality and Downy Mildew Resistance

    Science.gov (United States)

    Comparing performance of a large number of accessions simultaneously is not always possible. Typically, only subsets of all accessions are tested in separate trials with only some (or none) of the accessions overlapping between subsets. Using standard statistical approaches to combine data from such...

  3. Ranges of Iodine and Bromine Isotopes Produced in the Interaction of High-Energy Protons with Uranium; Isotopes de l'Iode et du Brome Produits par l'Interaction de Protons de Haute Energie avec l'Uranium; 041f 0420 041e 0411 0415 0413 0418 0418 0417 041e 0422 041e 041f 041e 0412 0419 041e 0414 0410 0418 0411 0420 041e 041c 0410 , 041f 041e 041b 0423 0427 0415 041d 041d 042b 0425 041f 0420 0418 0412 0417 0410 0418 041c 041e 0414 0415 0419 0421 0422 0412 0418 0418 041f 0420 041e - 0422 041e 041d 041e 0412 0411 041e 041b 042c 0428 041e 0419 042d 041d 0415 0420 0413 0418 0418 0421 0423 0420 0410 041d 041e 041c ; Alcance de los Isotopos del Yodo y del Bromo Producidos en la Interaccion de Protones de Alta Energia con el Uranio

    Energy Technology Data Exchange (ETDEWEB)

    Brandt, R. [CERN, Geneva (Switzerland); Max Planck Institut fuer Kernphysik, Heidelberg, Federal Republic of Germany (Germany)

    1965-07-15

    GeV. Lliode (ou le brome) est chimiquement isole et separe dans le separateur de radioisotopes du CEIIN. Cette operation permet d'obtenir des echantillons sans entraineur qui ne contiennent essentiellement qu'un seul radioisotope pur. Le rendement chimique est egalement determine. L'analyse des donnees indique directement le parcours de chaque isotope dans l'uranium. Pour une energie des protons de 0,55 GeV, le parcours de tous les istopes de l'iode est le meme, c'est-a- dire qu'ils sont tous produits par un processus de fission. On savait precedemment que ceux des isotopes de l'iode qui sont riches en neutrons ont a peu pres le meme parcours que l'energie des protons, qu'elle soit superieure ou inferieure a 1 GeV, et que les isotopes de l'iode pauvres en neutrons accusent une diminution nette du parcours de la moitie environ lorsque l'energie des protons augmente au-dela de 1 GeV. .L'auteur montre que cette diminution de parcours se produit assez brusquement en donnant une fonction echelonnee de la courbe du parcours en fonction de la masse isotopique de l'iode. Les isotopes pauvres en neutrons qui ont un parcours moindre au-dessus d'une energie de 1 GeV sont les memes que ceux pour lesquels on a observe une forte augmentation de leur fonction d'excitation au-dessus de 1 GeV. Les isotopes du brome accusent essentiellement le meme comportement en ce qui concerne le parcours. La courbe de rendement isotopique en brome a partir de l'uranium presente les memes caracteristiques principales que la courbe correspondante pour l'iode. La forte augmentation de la formation des isotopes pauvres en neutrons s'observe a nouveau aux energies de bombardement elevees, La discussion poete principalement sur ces isotopes, pauvres en neutrons. Ils ne sont produits essentiellement qu'au-dessus de 1 GeV; aux energies de bombardement elevees, leur parcours n'est qu'environ la moitie de celui des produits de fission normaux, ce qui indique qu'ils sont formes par un processus autre que la

  4. Book title: Exotic brome grasses in arid and semi-arid ecosystems of the western US: causes, consequences, and management implications

    Science.gov (United States)

    Exotic invasive annual grass research and management in arid and semiarid ecosystems of the western US have historically focused on the outcome of efforts to reduce weed abundance. Given the current impact of invasive annual grasses and their continued spread in this region, we assessed components ...

  5. Brome isotope selective control of CF3Br molecule clustering by IR laser radiation in gas-dynamic expansion of CF3Br - Ar mixture

    Science.gov (United States)

    Apatin, V. M.; Lokhman, V. N.; Makarov, G. N.; Ogurok, N.-D. D.; Ryabov, E. A.

    2018-02-01

    We report the results of research on the experimental control of CF3Br molecule clustering under gas-dynamic expansion of the CF3Br - Ar mixture at a nozzle exit by using IR laser radiation. A cw CO2 laser is used for exciting molecules and clusters in the beam and a time-of-flight mass-spectrometer with laser UV ionisation of particles for their detection. The parameters of the gas above the nozzle are determined (compositions and pressure) at which intensive molecule clustering occurs. It is found that in the case of the CF3Br gas without carrier when the pressure P0 above the nozzle does not exceed 4 atm, molecular clusters actually are not generated in the beam. If the gas mixture of CF3Br with argon is used at a pressure ratio 1 : N, where N >= 3, and the total pressure above the nozzle is P0 >= 2 atm, then there occurs molecule clustering. We study the dependences of the efficiency of suppressing the molecule clustering on parameters of the exciting pulse, gas parameters above the nozzle, and on a distance of the molecule irradiation zone from the nozzle exit section. It is shown that in the case of resonant vibrational excitation of gas-dynamically cooled CF3Br molecules at the nozzle exit one can realise isotope-selective suppression of molecule clustering with respect to bromine isotopes. With the CF3Br - Ar mixtures having the pressure ratio 1 : 3 and 1 : 15, the enrichment factors obtained with respect to bromine isotopes are kenr ≈ 1.05 ± 0.005 and kenr ≈ 1.06 ± 0.007, respectively, under jet irradiation by laser emission in the 9R(30) line (1084.635 cm-1). The results obtained let us assume that this method can be used to control clustering of molecules comprising heavy element isotopes, which have a small isotopic shift in IR absorption spectra.

  6. Mapping genes in barley for resistance to Puccinia coronata from couch grass and to P. striiformis from brome, wheat and barley

    NARCIS (Netherlands)

    Niks, R.E.; Alemu, Sisay K.; Marcel, T.C.; Heyzen, van Skye

    2015-01-01

    Barley (Hordeum vulgare L.) mapping populations have been developed that are useful to study the inheritance of quantitative resistance to adapted and unadapted rust fungi. In a recent host range study, we found that the parents of those mapping populations also differed in their resistance to

  7. Verification of the systematic position of California brome (Bromus carinatus Hook. and Arn., Poaceae, cv. 'Broma', on the basis of analysis of issr markers

    Directory of Open Access Journals (Sweden)

    Agnieszka Sutkowska

    2012-10-01

    Full Text Available ‘Broma’ is a grass cultivar belonging to the species Bromus carinatus. In the Lists of Agricultural Plant Varieties of the Research Centre for Cultivar Testing (COBORU, it is shown as Bromus willdenowii (= B. catharticus, B. unioloides (List of Agricultural Plant Varieties 1989-2009, whereas already in 1984 Mirek demonstrated on the basis of morphological analysis that this was a different closely related species – B. carinatus. The aim of the present study was to verify the species affiliation of cv. ‘Broma’. The conducted analysis of ISSR molecular markers included representatives of cv. ‘Broma” as well as of B. carinatus and B. willdenowii. The method used allowed the identification of molecular markers of the above-mentioned taxa. The numerical analysis of the obtained results suggests that cv. ‘Broma’ should be classified in the species B. carinatus, not B. willdenowii.

  8. Ecological Genetics of Vernalization Response in Bromus tectorum L. (Poaceae)

    Science.gov (United States)

    MEYER, SUSAN E.; NELSON, DAVID L.; CARLSON, STEPHANIE L.

    2004-01-01

    • Background and Aims Bromus tectorum (cheatgrass or downy brome) is an exotic annual grass that is dominant over large areas of former shrubland in western North America. To flower in time for seed production in early summer, B. tectorum plants generally require vernalization at winter temperatures, either as imbibed seeds or as established seedlings. • Methods Variation in response to increasing periods of vernalization as seeds or seedlings for progeny of ten full‐sib families from each of four B. tectorum populations from contrasting habitats was studied. • Key Results As vernalization was increased from 0 to 10 weeks, the proportion of plants flowering within 20 weeks increased, weeks to initiation of flowering decreased, and seed yield per plant increased, regardless of whether plants were vernalized as seeds or seedlings. Most of the variation was accounted for by differences among populations. Plants of the warm desert population flowered promptly even without vernalization, while those of the cold desert, foothill and montane populations showed incremental changes in response variables as a function of vernalization period. Populations differed in among‐family variance, with the warm desert population generally showing the least variance and the cold desert population the most. Variation among populations and among families within populations decreased as vernalization period increased, whereas the non‐genetic component of variance showed no such pattern. • Conclusions Variation in vernalization response was found to be adaptively significant and apparently represents the result of contrasting selection regimes on a range of founder genotypes. PMID:15087300

  9. Interacting Agricultural Pests and Their Effect on Crop Yield: Application of a Bayesian Decision Theory Approach to the Joint Management of Bromus tectorum and Cephus cinctus

    Science.gov (United States)

    Keren, Ilai N.; Menalled, Fabian D.; Weaver, David K.; Robison-Cox, James F.

    2015-01-01

    Worldwide, the landscape homogeneity of extensive monocultures that characterizes conventional agriculture has resulted in the development of specialized and interacting multitrophic pest complexes. While integrated pest management emphasizes the need to consider the ecological context where multiple species coexist, management recommendations are often based on single-species tactics. This approach may not provide satisfactory solutions when confronted with the complex interactions occurring between organisms at the same or different trophic levels. Replacement of the single-species management model with more sophisticated, multi-species programs requires an understanding of the direct and indirect interactions occurring between the crop and all categories of pests. We evaluated a modeling framework to make multi-pest management decisions taking into account direct and indirect interactions among species belonging to different trophic levels. We adopted a Bayesian decision theory approach in combination with path analysis to evaluate interactions between Bromus tectorum (downy brome, cheatgrass) and Cephus cinctus (wheat stem sawfly) in wheat (Triticum aestivum) systems. We assessed their joint responses to weed management tactics, seeding rates, and cultivar tolerance to insect stem boring or competition. Our results indicated that C. cinctus oviposition behavior varied as a function of B. tectorum pressure. Crop responses were more readily explained by the joint effects of management tactics on both categories of pests and their interactions than just by the direct impact of any particular management scheme on yield. In accordance, a C. cinctus tolerant variety should be planted at a low seeding rate under high insect pressure. However as B. tectorum levels increase, the C. cinctus tolerant variety should be replaced by a competitive and drought tolerant cultivar at high seeding rates despite C. cinctus infestation. This study exemplifies the necessity of

  10. Interacting agricultural pests and their effect on crop yield: application of a Bayesian decision theory approach to the joint management of Bromus tectorum and Cephus cinctus.

    Science.gov (United States)

    Keren, Ilai N; Menalled, Fabian D; Weaver, David K; Robison-Cox, James F

    2015-01-01

    Worldwide, the landscape homogeneity of extensive monocultures that characterizes conventional agriculture has resulted in the development of specialized and interacting multitrophic pest complexes. While integrated pest management emphasizes the need to consider the ecological context where multiple species coexist, management recommendations are often based on single-species tactics. This approach may not provide satisfactory solutions when confronted with the complex interactions occurring between organisms at the same or different trophic levels. Replacement of the single-species management model with more sophisticated, multi-species programs requires an understanding of the direct and indirect interactions occurring between the crop and all categories of pests. We evaluated a modeling framework to make multi-pest management decisions taking into account direct and indirect interactions among species belonging to different trophic levels. We adopted a Bayesian decision theory approach in combination with path analysis to evaluate interactions between Bromus tectorum (downy brome, cheatgrass) and Cephus cinctus (wheat stem sawfly) in wheat (Triticum aestivum) systems. We assessed their joint responses to weed management tactics, seeding rates, and cultivar tolerance to insect stem boring or competition. Our results indicated that C. cinctus oviposition behavior varied as a function of B. tectorum pressure. Crop responses were more readily explained by the joint effects of management tactics on both categories of pests and their interactions than just by the direct impact of any particular management scheme on yield. In accordance, a C. cinctus tolerant variety should be planted at a low seeding rate under high insect pressure. However as B. tectorum levels increase, the C. cinctus tolerant variety should be replaced by a competitive and drought tolerant cultivar at high seeding rates despite C. cinctus infestation. This study exemplifies the necessity of

  11. Interacting agricultural pests and their effect on crop yield: application of a Bayesian decision theory approach to the joint management of Bromus tectorum and Cephus cinctus.

    Directory of Open Access Journals (Sweden)

    Ilai N Keren

    Full Text Available Worldwide, the landscape homogeneity of extensive monocultures that characterizes conventional agriculture has resulted in the development of specialized and interacting multitrophic pest complexes. While integrated pest management emphasizes the need to consider the ecological context where multiple species coexist, management recommendations are often based on single-species tactics. This approach may not provide satisfactory solutions when confronted with the complex interactions occurring between organisms at the same or different trophic levels. Replacement of the single-species management model with more sophisticated, multi-species programs requires an understanding of the direct and indirect interactions occurring between the crop and all categories of pests. We evaluated a modeling framework to make multi-pest management decisions taking into account direct and indirect interactions among species belonging to different trophic levels. We adopted a Bayesian decision theory approach in combination with path analysis to evaluate interactions between Bromus tectorum (downy brome, cheatgrass and Cephus cinctus (wheat stem sawfly in wheat (Triticum aestivum systems. We assessed their joint responses to weed management tactics, seeding rates, and cultivar tolerance to insect stem boring or competition. Our results indicated that C. cinctus oviposition behavior varied as a function of B. tectorum pressure. Crop responses were more readily explained by the joint effects of management tactics on both categories of pests and their interactions than just by the direct impact of any particular management scheme on yield. In accordance, a C. cinctus tolerant variety should be planted at a low seeding rate under high insect pressure. However as B. tectorum levels increase, the C. cinctus tolerant variety should be replaced by a competitive and drought tolerant cultivar at high seeding rates despite C. cinctus infestation. This study exemplifies the

  12. 77 FR 66834 - Pesticide Emergency Exemptions; Agency Decisions and State and Federal Agency Crisis Declarations

    Science.gov (United States)

    2012-11-07

    ... greenhouse grown basil to control downy mildew; May 15, 2012 to December 31, 2012. Contact: Debra Rate. EPA authorized the use of mandipropamid on greenhouse grown basil to control downy mildew; May 15, 2012 to... Conrath. EPA authorized the use of cyazofamid on greenhouse and shadehouse grown basil to control downy...

  13. Growth response of downy birch (Betula pubescens) to moisture treatment at an cut-over peat bog in the Šumava Mts., Czech Republic

    Czech Academy of Sciences Publication Activity Database

    Lanta, Vojtěch; Hazuková, I.

    2005-01-01

    Roč. 42, - (2005), s. 247-256 ISSN 0003-3847 R&D Projects: GA ČR GD206/03/H034 Institutional research plan: CEZ:AV0Z6005908 Keywords : Betula pubescens * cut-over peatland * increment Subject RIV: EF - Botanics Impact factor: 0.315, year: 2005

  14. Implications of Farmers' Propensity to Discontinue Adoption of Downy-Mildew Resistant Maize and Improved Cowpea Varieties for Extension Education in Southwestern Nigeria

    Science.gov (United States)

    Oladele, O. I.; Adekoya, A. E.

    2006-01-01

    This paper examines the implications of farmers' propensity to discontinue the adoption of agricultural technologies in southwestern Nigeria. This is predicated on the fact that extension education process should be proactive in addressing farmers in order to sustain the adoption process. Empirical studies looking at diffusion processes from an…

  15. Induction of defence mechanisms in grapevine leaves by emodin- and anthraquinone-rich plant extracts and their conferred resistance to downy mildew.

    Science.gov (United States)

    Godard, Sophie; Slacanin, Ivan; Viret, Olivier; Gindro, Katia

    2009-09-01

    The ability of two plant extracts, Rheum palmatum root extract (RPRE) and Frangula alnus bark extract (FABE), to protect Vitis vinifera leaves from Plasmopara viticola infection was evaluated. These natural products are toxic to the pathogen and induce defence reactions in a susceptible cultivar of V. vinifera (V. vinifera cv. Chasselas), including stilbenic phytoalexin accumulation, enhanced peroxidase (EC 1.11.1.7) activity, and a hypersensitive reaction. Inhibition of the first stage of biotrophic hyphal development of P. Viticola by the two plant extracts was observed. HPLC-DAD-MS analysis showed that these two natural extracts contain many phenolic compounds belonging to the anthraquinone family, such as rhein, frangulin A, emodin, aloe-emodin, chrysophanol, and physcion. Emodin alone is able to impair P. viticola development and to stimulate viniferins and the accumulation of pterostilbene.

  16. To be or not to be a subspecies: description of Saperda populnea lapponica ssp. n. (Coleoptera, Cerambycidae) developing in downy willow (Salix lapponum L.)

    Science.gov (United States)

    Wallin, Henrik; Kvamme, Torstein; Bergsten, Johannes

    2017-01-01

    Abstract A new subspecies of the European cerambycid Saperda populnea (Linnaeus, 1758) is described: Saperda populnea lapponica ssp. n. based on specimens from Scandinavia. The male genitalia characters were examined and found to provide support for this separation, as well as differences in morphology, geographical distribution and bionomy. The preferred host tree for the nominate subspecies S. populnea populnea is Populus tremula L., whereas S. populnea lapponica ssp. n. is considered to be monophagous on Salix lapponum L. DNA sequence data of mitochondrial cytochrome oxidase subunit I (COI) was generated from Scandinavian specimens of S. populnea populnea and specimens representing S. populnea lapponica ssp. n. The two subspecies were not reciprocally monophyletic and genetic distances in COI were small. All synonyms of S. populnea populnea have been considered, and species similar to S. populnea populnea have been examined, and not found to be related to S. populnea lapponica ssp. n. A male lectotype has been designated for each of the two following synonyms: Cerambyx decempunctatus De Geer, 1775, and Saperda salicis Zetterstedt, 1818. The synonymised species from Asia, S. balsamifera (Motshulsky, 1860), is elevated to subspecies: S. populnea balsamifera stat. n. We end with a discussion on the definition of subspecies under the unified species concept. PMID:29187784

  17. Environmental Assessment: Black-Tailed Prairie Dog Management Cannon Air Force Base and Melrose Air Force Range, New Mexico

    Science.gov (United States)

    2005-12-01

    requirements are met by metabolizing grazed vegetation. Prairie dogs dig burrows to an average depth of 2-3 meters with some tunnels interconnecting with...the potential to impact non- target species such as mice, kangaroo rats, and some songbirds. Establishing control zones at CAFB and MAFR could not be...Gutierrezia sarothrae), and Russian thistle (Salsola iberica). Water requirements are met by metabolizing grazed vegetation. Prairie dogs dig burrows

  18. Os anofelinos do sub-gênero kerteszia em relação à distribuição das bromeliáceas em comunidades florestais do município de Brusque, Estado de Santa Catarina

    Directory of Open Access Journals (Sweden)

    Henrique P. Veloso

    1956-06-01

    Full Text Available Die vorliegende Arbeit bildet einem Teil der Studien, die unter Leitung des nationalen Malaria-Dienstes in Zusammenarbeit mit Technikern des Institutes Oswaldo Cruz im Sueden Brasiliens durchgefuehrt werden und sich mit dem Problem des Wechselspiels zwischen Malaria und Bromeliacen befassen. Die verfasser bearbeiten in dieser Niederschrift, die den Anfang einer Serie ueber die erwaehnten Fragen darstellt, die Entwicklung der Anophelinen der Untergattung Kerteszia in den Wasseransammlungen der Blattwinkel von Bromelien. Es wurde das Munizip Brusque ausgewaehlt, da hier die Abhaengigkeit der Bevoelkerung vom Wald eine sehr enge ist und da dieses Gebiet fuer die Oekologie und Topographie der Suedregion charakteristisch ist. Den hier gefundenen Wald nennen die Autoren die “Suedbrasilianische Regenformation”. Vor der Ankunft der Arbeitsgruppe wurden die folgenden Methoden zur Bekaempfung der Brutstaetten der Malariauebertraeger angewendet: 1. Manuelle Entfernung der Bromelien aus den die Staedte umgebenden Waeldern, 2. Abholzung. Da diese beiden Methoden zu drastisch sind, benutzten die erwaehnten Techniker anfangs eine 0,5% ige Loesung von Kupfersulfat als “Bromelicid” und spaeter PariserGruen, das vom Flugzeug aus verstaeubt wurde. Um ueberfluessige Schaeden an den Pflanzengesellschaften zu vermeiden, wurde daran gedacht, auf Grund oekologischer Betrachtungen das Problem “Bromeliaceae-Malaria” nach dem Vorbild Pittendrigh’s in Trinidad zu loesen. Es wurde folgenden Arbeitsplan durchgefuehrt: 1. Studium der Vergesellchaftungen im Hinblick auf die Soziologie und ihre Beziehungen zu den Bromelien, 2. Auszaehlung der in den Bromelien enthaltenen Larven und Puppen, 3. Kenntnis des Mittelwertes der Larven, die sich zu Imagines entwickeln und 4. Mikrolima der Waelder usw. Die Oekologie der bromelien wurde in einer frueheren Publikation veroeffentlich (Veloso, H. P., 1952. Das botanische Material der vorliegenden Arbeit wurde von Spezialisten verschiedener Laender der Welt klassifiziert.

  19. Observations on the liberation of bromine and iodine from UO{sub 2} during irradiation; Observations sur le degagement du brome et de l'iode hors de l'UO{sub 2} durant l'irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Chenebault, P; Hairion, J [Commissariat a l' Energie Atomique, Grenoble (France). Centre d' Etudes Nucleaires

    1968-07-01

    UO{sub 2} samples, have been irradiated isothermally between 150 C and 1800 C; the krypton and xenon released are swept from the samples, collected out of pile in traps and analyzed. A study of the kinetics suggests that, for a given temperature, the emission of the halogens radioactive parents of the rare gases is the most important process. By using previously irradiated samples containing high concentrations of some gaseous isotopes it is observed that the release of xenons and krypton is not much dependant on the concentrations of the gases in the solid; it is concluded that the rare gas release during irradiation is due mainly to the migration of the halogens. (author) [French] Des echantillons d'UO{sub 2} sont irradies en conditions isothermes entre 150 et 1 800 C; les kryptons et xenons degages sont entraines hors de la pile, recueillis sur des pieges et analyses. L'observation des cinetiques suggere qu'a une temperature donnee, l'emission des halogenes precurseurs des gaz rares est le phenomene preponderant. En utilisant des echantillons prealablement irradies et contenant de fortes concentrations en certains isotopes gazeux il est observe que l'evolution des xenons et kryptons est peu dependante de leur concentration dans le solide; il est conclu que pendant l'irradiation, le degagement des gaz rares doit etre attribue principalement aux halogenes. (auteur)

  20. O relêvo do solo como fator determinante da distribuição dos Anofelíneos na região "Bromeliácea-Malária do Brasil

    Directory of Open Access Journals (Sweden)

    Henrique P. Veloso

    1958-07-01

    Full Text Available Aus dem Vorhergehenden ergibt sich, dass das Problem "Bromeliaceen-Kerteszia" hinsichtlich des Bodenreliefs in vier Punkten zusammengefasst werden kann: 1- Zone des Vorkommens von Anopheles (Kerteszia cruzii; das sind die Kontinentalebenen der Niederung des Itapocú im Norden der Region und der des Araranguá im Sueden. Dazu kommen die benachbarten Streifen einschliesslich der Abhaenge der Serra do Mar. 2 - Zone des Vorkommens von Anopheles (Kerteszia cruzii und bellator; das sind die quartaeren Ebenen mariner Sedimente (Restingas. 3 - Zone des Vorkommens von Anopheles (Kerteszia cruzii, bellator und homunculus; das ist das stark vertikal aufgeteilte Relief der parallel zueinander in EW-Richtung verlaufenden Gebirgszuege. 4 - Zone des Vorkommens von Anopheles (Kerteszia cruzii und homunculus; das sind die Abhaenge der Gebirgsraender des kristalinen Hochlandes, die tief durch die zum Meer gerichteten Fluesse zerschnitten sind. Ebenfalls erbigt sich, dass in den vier Zonen die Art Anopheles (Kerteszia cruzii einen gleichbleibenden Prozentsatz an Larven aufweist, woraus hervorgeht: 1 - Die Art besitzt keine bevorzugte Wohnstaette, in Bezug aur die Eiablage, in der zur Frage stehenden biogeographischen Region. 2- Die grossen Differenzen bezueglich des Prozentsatzes an positiven Brutstaetten in den bearbeiteten Gebieten haengt nicht von dem groesseren oder geringeren vorkommen der entspreschenden Art im biotop ab, sondern von den Wohnstaetten, die fuer das Leben der Arten Anopheles (Kerteszia bellator und homunculus geeignet sind. Des weiteren ersieht man, dass, im allgemeinen gesehen, eine Abnahmees der Positivitaet der Brutstaetten in der EW-Richtung besteht, dagegen ist die Verringerung in der NS-Richtung weininger akzentuiert.

  1. Mapping and spatial-temporal modeling of Bromus tectorum invasion in central Utah

    Science.gov (United States)

    Jin, Zhenyu

    Cheatgrass, or Downy Brome, is an exotic winter annual weed native to the Mediterranean region. Since its introduction to the U.S., it has become a significant weed and aggressive invader of sagebrush, pinion-juniper, and other shrub communities, where it can completely out-compete native grasses and shrubs. In this research, remotely sensed data combined with field collected data are used to investigate the distribution of the cheatgrass in Central Utah, to characterize the trend of the NDVI time-series of cheatgrass, and to construct a spatially explicit population-based model to simulate the spatial-temporal dynamics of the cheatgrass. This research proposes a method for mapping the canopy closure of invasive species using remotely sensed data acquired at different dates. Different invasive species have their own distinguished phenologies and the satellite images in different dates could be used to capture the phenology. The results of cheatgrass abundance prediction have a good fit with the field data for both linear regression and regression tree models, although the regression tree model has better performance than the linear regression model. To characterize the trend of NDVI time-series of cheatgrass, a novel smoothing algorithm named RMMEH is presented in this research to overcome some drawbacks of many other algorithms. By comparing the performance of RMMEH in smoothing a 16-day composite of the MODIS NDVI time-series with that of two other methods, which are the 4253EH, twice and the MVI, we have found that RMMEH not only keeps the original valid NDVI points, but also effectively removes the spurious spikes. The reconstructed NDVI time-series of different land covers are of higher quality and have smoother temporal trend. To simulate the spatial-temporal dynamics of cheatgrass, a spatially explicit population-based model is built applying remotely sensed data. The comparison between the model output and the ground truth of cheatgrass closure demonstrates

  2. Pyrenophoric acid, a phytotoxic sesquiterpenoid penta-2,4-dienoic acid produced by a potential mycoherbicide, Pyrenophora semeniperda

    Science.gov (United States)

    Marco Masi; Susan Meyer; Alessio Cimmino; Anna Andolfi; Antonio Evidente

    2014-01-01

    A new phytotoxic sesquiterpenoid penta-2,4- dienoic acid, named pyrenophoric acid, was isolated from solid wheat seed culture of Pyrenophora semeniperda, a fungal pathogen proposed as a mycoherbicide for biocontrol of cheatgrass (Bromus tectorum) and other annual bromes. These bromes are serious weeds in winter cereals and also on temperate semiarid rangelands....

  3. Flood Control at Grafton, North Dakota, Park River.

    Science.gov (United States)

    1975-08-01

    expected to occur, in the escarpment forest include mice, shrews , voles, bats, rabbits, squirrels, muskrat, woodchuck, beaver, pocket gopher, ground...although short-grass prairie would probably eventually be invaded by either taller tame grasses, such as brome, or taller native grasses). 2. The ...grass prairie would eventually be invaded by either taller tame grasses (brome) or taller natives in this area. Thus, the statement that "there would

  4. ISSN 2073 ISSN 2073-9990 East Cent. Afr. J. surg. (Online) 9990 ...

    African Journals Online (AJOL)

    Prof Kakande

    Afr. J. surg. ..... September/October 2003. 3. Hardin R, Stevenson M, Downie W, Wilson G. Assessment of clinical competence using objective ... Michael J. Griesser, Matthew C. Beran, David C. Flanigan, Michael Quackenbush, DO, Corey Van ...

  5. Discovery of Cyrtosia nana (Orchidaceae in India

    Directory of Open Access Journals (Sweden)

    Sanatombi Devi Yumkham

    2013-09-01

    Full Text Available Cyrtosia nana (Rolfe ex Downie Garay, a rare mycotrophic orchid is recorded from Manipur State for the first time in India. Detailed taxonomic description, photographs and relevant notes are provided.

  6. Younger Adults Derive Pleasure and Utilitarian Benefits from Browsing for Music Information Seeking in Physical and Digital Spaces. A Review of: Laplante, A., & Downie, J. S. (2011). The utilitarian and hedonic outcomes of music information-seeking in everyday life. Library & Information Science Research, 33, 202-210. doi:10.1016/j.lisr.2010.11.002

    OpenAIRE

    Diana K. Wakimoto

    2012-01-01

    Objective – This study’s objective was to identify the utilitarian and hedonic features of satisfying music information seeking experiences from the perspective of younger adults when using physical and digital music information retrieval (MIR) systems in their daily lives.Design – In-depth, semi-structured interviews.Setting – Large public library in Montreal, Canada.Subjects – 15 French-speaking younger adults,10 males and 5 females (aged 18 to 29 years, mean age of 24 years).Methods – A pr...

  7. Efecto del Fosfito de Potasio en Combinación con el Fungicida Metalaxyl + Mancozeb en el Control de Mildeo Velloso (Peronospora destructor Berk en Cebolla de Bulbo (Allium cepa L. Effect of the Potasium Phosphite in Combination with the Fungicide Metalaxyl plus Mancozeb on the Control of Downy Mildew (Peronospora destructor Berk in Onion Bulb (Allium cepa L.

    Directory of Open Access Journals (Sweden)

    Jorge Velandia Monsalve

    2012-06-01

    Full Text Available Resumen. El hongo Peronospora destructor causa considerables pérdidas en la producción de cebolla de bulbo en el mundo. Fosfito de potasio en combinación con el fungicida Metalaxyl + Mancozeb, fue evaluado por su eficiencia en el control de este patógeno en el híbrido de cebolla de bulbo Yellow Granex. Los tratamientos consistieron en una aplicación de fosfito (5 mL L-1 alternada con una de fungicida (2 g L-1; dos y tres aplicaciones consecutivas de fosfito alternadas con una de fungicida; una aplicación de fungicida alternada con una de fosfito; dos y tres aplicaciones consecutivas de fungicida alternadas con una de fosfito; aplicaciones de sólo fosfito y sólo fungicida y un testigo. Se utilizó el diseño experimental de bloques completos al azar con tres repeticiones. Se evaluó la incidencia y severidad de la enfermedad, el número, tamaño y peso de bulbos de primera, segunda, tercera y peso total de bulbos. Los resultados mostraron que las aplicaciones de fosfito de potasio durante dos semanas consecutivas alternadas en la tercera semana con una de fungicida y las aplicaciones semanales de sólo fosfito, tuvieron efectos altamente significativos en el control de la incidencia y severidad de P. destructor y diferencias significativas en el peso de los bulbos de primera (28,1 y 27,9 t ha-1 y peso total de bulbos (55,5 y 52,1 t ha-1, representando en relación al testigo, un incremento de 200 y 196% en el peso de los bulbos de primera y de 55 y 45,7% en el peso total de bulbos, respectivamente. Se concluye que con el fosfito de potasio se reduce la aplicación de fungicidas y ello es una alternativa viable para el manejo ecológico de P. destructor en la producción de cebolla de bulbo.Abstract. Peronospora destructor fungi causes considerable loses in the production of onion bulb in the world. Potassium phosphite in combination with the fungicide Metalaxyl + Mancozeb was evaluated for its efficiency in the control of this pathogen in the onion bulb hybrid Yellow Granex. The treatments consisted in one application of potassium phosphite (5 mL L-1 alternated with one of fungicide (2 g L-1; two and three consecutive applications of potassium phosphite alternated with one of fungicide; one application of fungicide alternated with one of potassium phosphite; two and three consecutive applications of fungicide alternated with one of potassium phosphite; applications of potassium phosphite and fungicide alone and one control. The experimental design was a complete block randomized with three replicates. The variables evaluated were the incidence and severity of the disease and the number, size and weight of the bulbs of first, second and third class and total bulb weight. The results showed that the applications of potassium phosphite during two consecutive weeks alternated in the third week with one of fungicide and the weekly applications of phosphite alone had highly significant effects on the control of the incidence and severity of P. destructor and significant differences on the weight of the first class bulbs (28.1 and 27.9 t ha-1 and total bulb weight (55.5 and 52.1 t ha-1, representing in comparison to the control an increment of 200 and 196% on the weight of the first class bulbs and of 55 and 45,7% on the total bulb weight, respectively. It is concluded that with the potassium phosphite the application of fungicides is reduced and this represents a viable alternative for the ecological management of P. destructor in the production of onion bulb.

  8. Younger Adults Derive Pleasure and Utilitarian Benefits from Browsing for Music Information Seeking in Physical and Digital Spaces. A Review of: Laplante, A., & Downie, J. S. (2011. The utilitarian and hedonic outcomes of music information-seeking in everyday life. Library & Information Science Research, 33, 202-210. doi:10.1016/j.lisr.2010.11.002

    Directory of Open Access Journals (Sweden)

    Diana K. Wakimoto

    2012-09-01

    Full Text Available Objective – This study’s objective was to identify the utilitarian and hedonic features of satisfying music information seeking experiences from the perspective of younger adults when using physical and digital music information retrieval (MIR systems in their daily lives.Design – In-depth, semi-structured interviews.Setting – Large public library in Montreal, Canada.Subjects – 15 French-speaking younger adults,10 males and 5 females (aged 18 to 29 years, mean age of 24 years.Methods – A pre-test was completed to test the interview guide. The guide was dividedinto five sections asking the participants questions about their music tastes, how music fit into their daily lives, how they discovered music, what music information sources were used and how they were used, what made their experiences satisfying, and theirbiographical information. Participants were recruited between April 1, 2006 and August 8,2007 following maximum variation samplingfor the main study. Recruitment stopped whendata saturation was reached and no new themes arose during analysis. Interviews were recorded and the transcripts were analyzed via constant comparative method (CCM to determine themes and patterns. Main Results – The researchers found that both utilitarian and hedonic factors contributed to satisfaction with music information seeking experiences for the young adults. Utilitarian factors were divided between two main categories: finding music and finding information about music. Finding information about music could be further divided into three sub-categories: increasing cultural knowledge and social acceptance through increased knowledge about music, enriching the listening experience by finding information about the artist and the music, and gathering information to help with future music purchases including information that would help the participants recommend music to others. Hedonic outcomes that contributed to satisfying information seeking experiences included deriving pleasure and feeling engaged while searching or browsing for music. Especially satisfying experiences were those where the participants felt highly engaged in the process and found new, independent, non-mainstream music. Not finding new music did not automatically lead to an unsatisfying experience for the participants; however, technology malfunctions in digital MIR systems and unpleasant environments such as those with unfriendly staff in physical music spaces (libraries and stores, led to unsatisfying experiences for the participants.Conclusions – As the results show that the hedonic aspects of music information seeking are very important, designers of MIR systems must take into account the hedonic as well as utilitarian outcomes when creating user interfaces. MIR systems should be designed with browsing as well as searching capabilities so searchers can make serendipitous discoveries of new music and information about music. In other words, MIR systems need to be engaging to ensure satisfying interactions for searchers.

  9. Controlling cheatgrass in winter range to restore habitat and endemic fire

    Science.gov (United States)

    Jennifer L. Vollmer; Joseph G. Vollmer

    2008-01-01

    Habitat managers can better prepare a program for prescribed burns, wildfire management, and maximum forage biomass by understanding the response of key shrubs to the tools utilized to reduce cheatgrass (Bromus spp.) competition. Application of Plateau® herbicide, prior to annual brome germination, at rates up to 8 oz/acre with or without surfactant...

  10. Forage production of grass-legume binary mixtures on Intermountain Western USA irrigated pastures

    Science.gov (United States)

    A well-managed irrigated pasture is optimized for forage production with the use of N fertilizer which incurs extra expense. The objective was to determine which binary grass-legume mixture and mixture planting ratio of tall fescue (Festuca arundinacea Schreb.) (TF), meadow brome (Bromus bieberstei...

  11. Evaluation of regionally-collected sideoats grama and big galleta grass for wildfire revegetation in the Eastern Upper Mojave Desert

    Science.gov (United States)

    Increased wildfires in the western U.S. are due to the cyclic accumulation and burning of invasive annual plants such as cheatgrass (Bromus tectorum) and red brome (B. rubens), which reduces native rangeland species and results in servere economic losses and land degradation. Fire was not prevalent...

  12. Notes on Alien Bromus Grasses in Taiwan

    Directory of Open Access Journals (Sweden)

    Ming-Jer Jung

    2006-06-01

    Full Text Available Bromus carinatus Hook. & Arn., Bromus hordeaceus L., Bromus pubescens Muhl. ex Willd. and Bromus secalinus L. were recently found at middle elevations of southern and central Taiwan, respectively. We present taxonomic treatments, distribution map, and line-drawings of these introduced alien brome grasses.

  13. Evaluation of regionally-collected sideoats grams and big galleta grass for wildfire revegetation in the Eastern Upper Mojave Desert

    Science.gov (United States)

    Increased wildfires in the western U.S. are due to the cyclic accumulation and burning of invasive annual plants such as cheatgrass (Bromus tectorum) and red brome (B. rubens), which reduces native rangeland species and results in severe economic losses and land degradation. Fire was not prevalent ...

  14. Soil sulfur amendments suppress Selenium uptake by alfalfa and western wheatgrass

    Science.gov (United States)

    C. L. Mackowiak; M. C. Amacher

    2008-01-01

    Selenium (Se) is a potential soil contaminant in many parts of the world where it can pose a health risk to livestock and wildlife. Phosphate ore mining in Southeast Idaho has resulted in numerous waste rock dumps revegetated with forages to stabilize the dumps and support grazing. Alfalfa (Medicago sativa L.), smooth brome (Bromus inermis...

  15. Afrique Science: Revue Internationale des Sciences et Technologie ...

    African Journals Online (AJOL)

    cyclohexe-1-enyl)-formamidine avec les 9H-carbazole 1,4-dione substitués et activés par le brome · EMAIL FREE FULL TEXT EMAIL FREE FULL TEXT DOWNLOAD FULL TEXT DOWNLOAD FULL TEXT. T Beguemsi, D Sissouma, L Bede, RB ...

  16. Mapping genetic variation and seed zones for Bromus carinatus in the Blue Mountains of eastern Oregon, USA

    Science.gov (United States)

    R.C. Johnson; Vicky J. Erickson; Nancy L. Mandel; J. Bradley St. Clair; Kenneth W. Vance-Borland

    2010-01-01

    Seed transfer zones ensure that germplasm selected for restoration is suitable and sustainable in diverse environments. In this study, seed zones were developed for mountain brome (Bromus carinatus Hook. & Arn.) in the Blue Mountains of northeastern Oregon and adjoining Washington. Plants from 148 Blue Mountain seed source locations were...

  17. Ecology, genetics, and biological control of invasive annual grasses in the Great Basin

    Science.gov (United States)

    Several annual grass species native to Eurasia, including cheatgrass (Bromus tectorum), red brome (B. rubens), and medusahead (Taeniatherum caput-medusae) have become invasive in the western USA. These invasive species degrade rangelands by compromising forage, outcompeting native flora, and exacerb...

  18. Modeling phosphorus capture by plants growing in a multi-species riparian buffer

    Science.gov (United States)

    The NST 3.0 mechanistic nutrient uptake model was used to explore phosphorus (P) uptake to a depth of 120 cm over a 126-d growing season in simulated buffer communities composed of mixtures of cottonwood (Populus deltoids Bartr.), switchgrass (Panicum virgatum L.), and smooth brome (Bromis inermis L...

  19. Effect of strain and cultural conditions on the production of cytochalasin B by the potential mycoherbicide Pyrenophora semeniperda (Pleosporaceae, Pleosporales)

    Science.gov (United States)

    Marco Masi; Antonio Evidente; Susan Meyer; Joshua Nicholson; Ashley. Munoz

    2014-01-01

    The seed pathogen Pyrenophora semeniperda has demonstrated potential as a mycoherbicidal biocontrol for eliminating persistent seed banks of annual bromes on western North American rangelands. This pathogen exhibits variation in virulence that is related to mycelial growth rate, but direct laboratory tests of virulence on seeds often have low repeatability. We...

  20. Cheating cheatgrass: New research to combat a wily invasive weed

    Science.gov (United States)

    Gail. Wells

    2012-01-01

    Cheatgrass and its cousin, red brome, are exotic annual grasses that have invaded and altered ecosystem dynamics in more than 41 million acres of desert shrublands between the Rockies and the Cascade-Sierra chain. A fungus naturally associated with these Bromus species has been found lethal to the plants' soil-banked dormant seeds. Supported by the Joint Fire...

  1. Biological Survey, Buffalo River and Outer Harbor of Buffalo, New York. Volume II. Data Report.

    Science.gov (United States)

    1982-06-01

    Arctium mimus Schk. (burdock) 3 3 Leonurus cardiaca L. 3 (motherwo-3 Oenothera biennia L. 3 3 (evening pri-rose) Galium AM ine L. 2 (bedstaw) Asclapias...Wild carrot Bromus japonicus Thumb. Japanese brome , Oenothera biennis L. Evening primrose Clematis virginiana Virgin’ s bower Bidens tripartita Beggar

  2. 77 FR 49893 - Endangered and Threatened Wildlife and Plants; Determination of Status for the Gierisch Mallow...

    Science.gov (United States)

    2012-08-17

    ... impacts, such as regulations governing mining operations; The spread of nonnative, invasive plant species... gypsum mining necessarily involves removal of the topsoil, eliminating, at least temporarily, the species..., invasive species such as cheatgrass and red brome. Livestock have been implicated in the spread of weeds...

  3. Journal of Genetics | Indian Academy of Sciences

    Indian Academy of Sciences (India)

    Downy mildew (DM) caused by Peronospora arborescens, is a serious disease in opium poppy (Papaver somniferum), which has a world-wide spread. The establishment of DM-resistant cultivars appears to be a sustainable way to control the disease. In this paper, we present the results of a study aimed at the identification ...

  4. Characterization of Peronospora belbahrii on basil under light and scanning electron microscopy

    Science.gov (United States)

    Basil (Ocimum spp.) downy mildew caused by Peronsoora belbahrii is a major yield-limiting disease of sweet basil (O. basilicum) production worldwide. In this study, sweet basil was grown in a soilless potting mix in plant growth chambers and inoculated with sporangia of P. belbahrii harvested from p...

  5. Asclepius or Hippocrates? Differing Interpretations of Post-Compulsory Initial Teacher Training Mentoring

    Science.gov (United States)

    Ingleby, Ewan

    2011-01-01

    This article discusses qualitative research findings on mentoring within PCET ITT (post-compulsory education and training initial teacher training). The article complements the findings of Tedder and Lawy (2009) and Ingleby (2010). The article develops Downie and Randall's consideration of the merits or otherwise of mirroring either "Asclepius" or…

  6. Lettuce breeding

    Science.gov (United States)

    In the 2016-2017 period, major efforts targeted resistance to lettuce drop caused by Sclerotinia species, Verticillium wilt, Fusarium wilt, bacterial leaf spot, corky root, downy mildew, drought tolerance, lettuce aphid, tipburn, shelf-life of salad-cut lettuce, and multiple disease resistance. Resi...

  7. Effector-mediated discovery of a novel resistance gene against Bremia Lactucae in a nonhost lettuce species

    NARCIS (Netherlands)

    Giesbers, A.K.J.; Pelgrom, Alexandra; Visser, R.G.F.; Niks, R.E.; Ackerveken, Van Den Guido; Jeuken, M.J.W.

    2017-01-01

    Candidate effectors from lettuce downy mildew (Bremia lactucae) enable high-throughput germplasm screening for the presence of resistance (R) genes. The nonhost species Lactuca saligna comprises a source of B. lactucae R genes that has hardly been exploited in lettuce breeding. Its

  8. Effector-mediated discovery of a novel resistance gene against Bremia lactucae in a nonhost lettuce species

    NARCIS (Netherlands)

    Giesbers, Anne K J; Pelgrom, Alexandra J E; Visser, Richard G F; Niks, Rients E; Van den Ackerveken, Guido; Jeuken, Marieke J W

    2017-01-01

    Candidate effectors from lettuce downy mildew (Bremia lactucae) enable high-throughput germplasm screening for the presence of resistance (R) genes. The nonhost species Lactuca saligna comprises a source of B. lactucae R genes that has hardly been exploited in lettuce breeding. Its

  9. Journal of Genetics | Indian Academy of Sciences

    Indian Academy of Sciences (India)

    mildew-susceptible genotypes of opium poppy · Mukesh K. Dubey Ajit K. Shasany Om P. Dhawan Ashutosh K. Shukla Suman P. S. Khanuja · More Details Abstract Fulltext PDF. Downy mildew (DM) caused by Peronospora arborescens, is a ...

  10. Powdery mildew reaction of hop cultivars and USDA germplasm, 2015

    Science.gov (United States)

    This research was conducted to identify possible sources of resistance to the disease powdery mildew in publicly-available hop germplasm and cultivars. Germplasm with the highest levels of downy mildew resistance in the USDA collection and various cultivars of interest were screened for their reac...

  11. Final Environmental Assessment: For the M270 Multiple Launch Rocket System (MLRS) Expanded Training Use Areas at Avon Park Air Force Range, Florida

    Science.gov (United States)

    2005-11-10

    and the propagation and maintenance of a healthy, well-balanced population of fish and wildlife (Florida Administrative Code 62-302) by state...Pistia stratiotes Water lettuce Psidium cattleianum Strawberry guava Rhodomyrtus tomentosa Downy rose myrtle Ruellia brittoniana Mexican petunia

  12. RFLP of analyses of an intergenic spacer region of chloroplast DNA ...

    African Journals Online (AJOL)

    user

    2006-11-16

    Nov 16, 2006 ... amplified with PCR and digested with 6 restriction endonucleases (Hpa II, Alu I, Hinc II, Ava III, Nde I and. Hae III). According to results ... the environment, but DNA based techniques represent reliable tools and do not have many of ... existence of some variations in gene content (Downie and Palmer, 1992).

  13. Genome mapping in F 1 population of crossbred Italia and Mercan ...

    African Journals Online (AJOL)

    ... and Mercan), 60 F1 (Italia × Mercan population) and two reference grape cultivar (Cabarnet Sauvignon and Merlot), successfully amplifying 112 markers. When the resistance traits to fungal diseases were analyzed during the study, no markers related with resistance to Botrytis cinerea and downy mildew could be found.

  14. Genetic variation and trait correlations in a birdresistant pearl millet ...

    African Journals Online (AJOL)

    selection indices for effective improvement. There was significant genetic variation for grain yield and most yield component traits, indicating that selection within the population would be feasible. Genetic variation was, however not significant for the percent incidence of downy mildew, implying that selection for improving ...

  15. Response of grapevine leaves to plasmopara viticola infection by means of measurement of reflectance and fluorescence signals

    Czech Academy of Sciences Publication Activity Database

    Šebela, David; Olejníčková, Julie; Župčanová, A.; Sotolář, R.

    2012-01-01

    Roč. 27, č. 8 (2012), s. 229-237 ISSN 1211-8516 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:67179843 Keywords : Plasmopara viticola * downy mildew * grapevine * leaf tissue * susceptible varieties * chlorophyll fluorescence imaging * reflectance Subject RIV: GM - Food Processing

  16. Testing Carea varipes and Neostauropus alternus as biological control agents for the Florida invasive plant species Rhodomyrtus tomentosa.

    Science.gov (United States)

    Rhodomyrtus tomentosa (RT) a native plant to Southeastern Asia, commonly known as downy rose myrtle, is invasive to the regions of Central and South Florida. Introduced in the early 1920’s, this weed is currently considered a Category I invasive species by the Florida Exotic Pest Plant Council. RT...

  17. Improving Creative Problem-Solving in a Sample of Third Culture Kids

    Science.gov (United States)

    Lee, Young Ju; Bain, Sherry K.; McCallum, R. Steve

    2007-01-01

    We investigated the effects of divergent thinking training (with explicit instruction) on problem-solving tasks in a sample of Third Culture Kids (Useem and Downie, 1976). We were specifically interested in whether the children's originality and fluency in responding increased following instruction, not only on classroom-based worksheets and the…

  18. Study of the liquid vapor equilibrium in the bromine-hydrobromic acid-water system

    Science.gov (United States)

    Benizri, R.; Lessart, P.; Courvoisier, P.

    1984-01-01

    A glass ebullioscope was built and at atmospheric pressure, liquid-vapor equilibria relative to the Br2-HBr-H2O system, in the concentration range of interest for evaluation of the Mark 13 cycle was studied. Measurements were performed for the brome-azeotrope (HBr-H2O) pseudo-binary system and for the ternary system at temperatures lower than 125 C and in the bromine concentration range up to 13% wt.

  19. Grassland canopy parameters and their relationships to remotely sensed vegetation indices in the Nebraska Sand Hills

    Science.gov (United States)

    Wylie, Bruce K.; DeJong, Donovan D.; Tieszen, Larry L.; Biondini, Mario E.

    1996-01-01

    Relationships among spectral vegetation indices and grassland biophysical parameters including the effects of varying levels of standing dead vegetation, range sites, and range plant communities were examined. Range plant communities consisting of northern mixed grass prairie and a smooth brome field as well as range sites and management in a Sand Hills bluestem prairie were sampled with a ground radiometer and for LAI, biomass, chlorophy

  20. Assessing the biophysical naturalness of grassland in eastern North Dakota with hyperspectral imagery

    Science.gov (United States)

    Zhou, Qiang

    Over the past two decades, non-native species within grassland communities have quickly developed due to human migration and commerce. Invasive species like Smooth Brome grass (Bromus inermis) and Kentucky Blue Grass (Poa pratensis), seriously threaten conservation of native grasslands. This study aims to discriminate between native grasslands and planted hayfields and conservation areas dominated by introduced grasses using hyperspectral imagery. Hyperspectral imageries from the Hyperion sensor on EO-1 were acquired in late spring and late summer on 2009 and 2010. Field spectra for widely distributed species as well as smooth brome grass and Kentucky blue grass were collected from the study sites throughout the growing season. Imagery was processed with an unmixing algorithm to estimate fractional cover of green and dry vegetation and bare soil. As the spectrum is significantly different through growing season, spectral libraries for the most common species are then built for both the early growing season and late growing season. After testing multiple methods, the Adaptive Coherence Estimator (ACE) was used for spectral matching analysis between the imagery and spectral libraries. Due in part to spectral similarity among key species, the results of spectral matching analysis were not definitive. Additional indexes, "Level of Dominance" and "Band variance", were calculated to measure the predominance of spectral signatures in any area. A Texture co-occurrence analysis was also performed on both "Level of Dominance" and "Band variance" indexes to extract spatial characteristics. The results suggest that compared with disturbed area, native prairie tend to have generally lower "Level of Dominance" and "Band variance" as well as lower spatial dissimilarity. A final decision tree model was created to predict presence of native or introduced grassland. The model was more effective for identification of Mixed Native Grassland than for grassland dominated by a single

  1. Heterogeneity of terrestrial bromeliad colonies and regeneration of Acacia praecox (Fabaceae in a humid-subtropical-Chaco forest, Argentina

    Directory of Open Access Journals (Sweden)

    Ignacio M Barberis

    2005-09-01

    . Seedling survival of A. praecox was slightly higher in quadrats with bromeliads in only one of the three plots. No seedling survived inside the bromeliad tanks. Apparently, bromeliad colonies have no effect on seedling regeneration of A. praecox. Rev. Biol. Trop. 53(3-4: 377-385. Epub 2005 Oct 3.En varios bosques tropicales y subtropicales, las plantas del sotobosque actúan como filtro ecológico que afecta diferencialmente la regeneración de las especies leñosas. En los bosques de Schinopsis balansae (Anacardiaceae del Chaco Oriental existen densas colonias de bromeliáceas terrestres que afectarían su regeneración al interceptar el agua de lluvia y los propágulos dentro de sus tanques. Estas bromeliáceas tienen distribución agrupada dejando espacios libres entre ellas. Describimos la heterogeneidad de tres colonias y analizamos como afectan la regeneración de Acacia praecox. En enero 1996, colocamos en cada colonia tres transectos con 150 parcelas de 100 cm². En cada parcela registramos el tipo de cobertura (i.e. bromeliáceas, hierbas, hojarasca ó suelo desnudo y la presencia de semillas o plántulas de A. praecox. En julio 1996, registramos la supervivencia de plántulas. Las colonias de bromiliáceas mostraron una alta heterogeneidad interna. Casi la mitad de las 450 parcelas estuvo cubierto por dos bromeliáceas terrestres. Aechmea distichantha se registró en 81% de las parcelas con bromeliáceas y Bromelia serra en las otras. Todas las parcelas estuvieron cubiertas por hojarasca. La mitad de ellas estuvieron cubiertas por hojas de bromeliáceas y el resto ocupado por sus bases. Donde no había bromeliáceas, el suelo estuvo cubierto por mantillo (83%, herbáceas (11%, u otros. En enero registramos 127 semillas y 176 plántulas de A. praecox. La densidad de ambas fue similar en parcelas con y sin bromeliáceas, pero su variabilidad fue mayor dentro de cada colonia que entre ellas. La densidad de semillas fue mayor debajo de las hojas de bromeliáceas que

  2. Area Handbook Series Guatemala, A Country Study,

    Science.gov (United States)

    1983-05-01

    o’independencee, the cp tanc general of’ Guatemsala consisted of the present-day republics of’ C;entral Amierica-Guatemnala, El Salvador, (Ionduras, Nicar- agua ...countries that maintained significant political relationships with Guatemala were Chile and Argentina. Both had active military relationships with...1 d somiething tobreak (downi time, coliiitr\\s grossl\\yneItial 204 lburisf maZUrke’t San Anitoni o .Aguasv Cali’n tc. Resvidenats in San Antonio Aguas

  3. Eficiencia del ácido ascórbico, ácido salicílico y extracto de Dulcamara (Bryophyllum gastonis B.) en la prevención de Mildeo velloso (Peronospora pulverulenta) en Gypsophila (Gypsophila paniculata) variedad Party Time

    OpenAIRE

    Puma Quinchuango, Lupe Marlene

    2010-01-01

    This research was conducted at Finca Santa Martha to the application of salicylic acid, ascorbic acid, dulcamara extract and mix them to control downy mildew ( Peronospora pulverulenta) in the cultivation of (Gypsophila paniculata) variety Party Time. 8 treatments were evaluated during the crop phenological stages such as induction, elongation and flowering. We utilized an experimental design with 3 replications DBCA was evaluated in incidence and severity. Results and discu...

  4. Effects of Whole and Partial Body Exposure to Dry Heat on Certain Performance Measures.

    Science.gov (United States)

    1981-05-01

    Robert Bachert who assisted with the statistical analyses; and he acknowledges the support of the Lite Mr. George C. Frost for his advice on the...of the study and interpretation of data: Dr. Arthur L Dudycha, Dr. Barry H. Kantowitz, Dr. N. M. Downie, Dr. Ernest J. McCormick, and Dr. Robert D...D., Summers, W. C., & Smedley , D. C., November 1974, Evaluation of a water- cooled helmet liner (AMRL-TR-74-135). Aerospace Medical Research

  5. Harnessing sorghum and millet biotechnology for food and health

    CSIR Research Space (South Africa)

    O'Kennedy, MM

    2006-11-01

    Full Text Available , the causal agent of rust disease, and the oomycete S. graminicola, causal agent of downy mildew, resulted in a significant reduction of disease symptoms in comparison to wild type control plants. The disease resistance of pearl millet was increased by up... of a wound-inducible promoter from a maize protease inhibitor gene (mpi) were produced via particle bombardment of shoot apices (Girijashankar et al., 2005). Although reductions in leaf damage (60%), larval mortality (40%) and larval weight (36...

  6. Final Environmental Assessment/Overseas Environmental Assessment Joint Strile Fighter System Development and Demonstration Developmental Test Program

    Science.gov (United States)

    2007-01-01

    Thoroughwort Eupatorium album N Pumpkin Ash Fraxinus profunda N Downy Milk Pea Galactia volubilis N Clasping-leaved St. John’s-wort Hypericum...Department of Commerce. Regional Accounts Data. Internet : http://www.bea.gov/bea/regional/reis. Bureau of Labor Statistics (BLS) 2004. U.S...Department of Labor. Local Area Unemployment Statistics. Internet . <http://data.bls.gov/>. CARB 2005. California Air Resources Board (CARB), “Ambient Air

  7. Acquired hypertrichosis lanuginosa

    Directory of Open Access Journals (Sweden)

    Kumar Pramod

    1993-01-01

    Full Text Available Acquired hypertirichosis lanuginose developed rapidly in a patient with no detectable malignancy. Soft, fine, downy hair growth was noticed on the face, ears, limbs and trunk. Bilaterally symmetrical vitiliginous macules were present on the ear and preauricular region. This case is reported because of its rarity, absence of any detectable malignancy and development of vitiligo, which to our knowledge has not been reported earlier.

  8. Towards optical detection of plasmopara viticola infection in the field

    Czech Academy of Sciences Publication Activity Database

    Šebela, David; Olejníčková, Julie; Sotolář, R.; Vrchotová, Naděžda; Tříska, Jan

    2014-01-01

    Roč. 96, č. 2 (2014), s. 309-320 ISSN 1125-4653 R&D Projects: GA MŠk(CZ) ED1.1.00/02.0073 Institutional support: RVO:67179843 Keywords : Downy mildew * grapevine * UV-induced fluorescence * chlorophyll fluorescence * reflectance * transresveratrol * 2,4,6-trihydroxyphenanthrene-2-O-glucoside Subject RIV: EH - Ecology, Behaviour Impact factor: 1.043, year: 2014

  9. Evaluation of environmentally friendly products for control of fungal diseases of grapes

    OpenAIRE

    Schilder, A.M.C.; Gillett, J.M.; Sysak, R.W.; Wise, J.C.

    2002-01-01

    Various environmentally friendly products were tested for efficacy in controlling powdery mildew, downy mildew, black rot, Phomopsis, and Botrytis bunch rot in grapes over several years. The products tested were: JMS stylet oil (paraffinic oil), Serenade (Bacillus subtilis), Croplife (citrus and coconut extract) + Plant food (foliar fertilizer), Armicarb (potassium bicarbonate), Elexa (chitosan), Milsana (giant knotweed extract), and AQ10 (Ampelomyces quisqua/is). JMS Stylet Oil, Armicarb, Se...

  10. Environmental Assessment for A-29 Light Air Support (LAS) Training Beddown

    Science.gov (United States)

    2014-08-21

    cuckoo (Coccyzus americanus), ruby-throated hummingbird (Archilochus colubris), downy woodpecker (Picoides pubescens), flicker (Colaptes aurates...extreme events. Minimal additional measures would be needed to mitigate these occurrences since the A-29 operation is temporary and would end in 2018...minimal additional measures would be needed to mitigate these occurrences since the A-29 operation is temporary and would end in 2018. 3.10.3 Alternative

  11. Universally Primed-PCR indicates geographical variation of Peronospora farinosa ex. Chenopodium quinoa.

    Science.gov (United States)

    Danielsen, Solveig; Lübeck, Mette

    2010-02-01

    In the Andean region of South America downy mildew, caused by Peronospora farinosa, is the most important disease of quinoa (Chenopodium quinoa). Peronospora farinosa, a highly polyphyletic species, occurs on quinoa and wild relatives on all continents. However, very little is known about the geographic diversity of the pathogen. As the interest in quinoa as a novel crop is increasing worldwide, geographical differences in the population structure of the downy mildew pathogen must be taken into consideration in order to design appropriate control strategies under a variety of circumstances. As a step towards understanding the geographic diversity of P. farinosa from quinoa, 40 downy mildew isolates from the Andean highlands and Denmark were characterized using universally primed PCR (UP-PCR). Eight UP-PCR primers were tested. A combined analysis of markers separated the Danish and Andean isolates in two distinct clusters. This study raises new questions about the origin and spread of P. farinosa on quinoa, its geographic diversity and host specificity.

  12. Secondary plant succession on disturbed sites at Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Angerer, J.P.; Ostler, W.K.; Gabbert, W.D.; Schultz, B.W.

    1994-12-01

    This report presents the results of a study of secondary plant succession on disturbed sites created during initial site investigations in the late 1970s and early 1980s at Yucca Mountain, NV. Specific study objectives were to determine the rate and success of secondary plant succession, identify plant species found in disturbances that may be suitable for site-specific reclamation, and to identify environmental variables that influence succession on disturbed sites. During 1991 and 1992, fifty seven disturbed sites were located. Vegetation parameters, disturbance characteristics and environmental variables were measured at each site. Disturbed site vegetation parameters were compared to that of undisturbed sites to determine the status of disturbed site plant succession. Vegetation on disturbed sites, after an average of ten years, was different from undisturbed areas. Ambrosia dumosa, Chrysothamnus teretifolius, Hymenoclea salsola, Gutierrezia sarothrae, Atriplex confertifolia, Atriplex canescens, and Stephanomeria pauciflora were the most dominant species across all disturbed sites. With the exception of A. dumosa, these species were generally minor components of the undisturbed vegetation. Elevation, soil compaction, soil potassium, and amounts of sand and gravel in the soil were found to be significant environmental variables influencing the species composition and abundance of perennial plants on disturbed sites. The recovery rate for disturbed site secondary succession was estimated. Using a linear function (which would represent optimal conditions), the recovery rate for perennial plant cover, regardless of which species comprised the cover, was estimated to be 20 years. However, when a logarithmic function (which would represent probable conditions) was used, the recovery rate was estimated to be 845 years. Recommendations for future studies and site-specific reclamation of disturbances are presented

  13. Secondary plant succession on disturbed sites at Yucca Mountain, Nevada

    Energy Technology Data Exchange (ETDEWEB)

    Angerer, J.P.; Ostler, W.K.; Gabbert, W.D.; Schultz, B.W.

    1994-12-01

    This report presents the results of a study of secondary plant succession on disturbed sites created during initial site investigations in the late 1970s and early 1980s at Yucca Mountain, NV. Specific study objectives were to determine the rate and success of secondary plant succession, identify plant species found in disturbances that may be suitable for site-specific reclamation, and to identify environmental variables that influence succession on disturbed sites. During 1991 and 1992, fifty seven disturbed sites were located. Vegetation parameters, disturbance characteristics and environmental variables were measured at each site. Disturbed site vegetation parameters were compared to that of undisturbed sites to determine the status of disturbed site plant succession. Vegetation on disturbed sites, after an average of ten years, was different from undisturbed areas. Ambrosia dumosa, Chrysothamnus teretifolius, Hymenoclea salsola, Gutierrezia sarothrae, Atriplex confertifolia, Atriplex canescens, and Stephanomeria pauciflora were the most dominant species across all disturbed sites. With the exception of A. dumosa, these species were generally minor components of the undisturbed vegetation. Elevation, soil compaction, soil potassium, and amounts of sand and gravel in the soil were found to be significant environmental variables influencing the species composition and abundance of perennial plants on disturbed sites. The recovery rate for disturbed site secondary succession was estimated. Using a linear function (which would represent optimal conditions), the recovery rate for perennial plant cover, regardless of which species comprised the cover, was estimated to be 20 years. However, when a logarithmic function (which would represent probable conditions) was used, the recovery rate was estimated to be 845 years. Recommendations for future studies and site-specific reclamation of disturbances are presented.

  14. Nano and micro reoriented domains and their relation with the crystal structure in the new ferroelectric boracite Zn3B7O13Br

    International Nuclear Information System (INIS)

    Campa-Molina, J; Ulloa-Godinez, S; Barrera, A; Bucio, L; Mata, J

    2006-01-01

    A new zinc brome boracite Zn 3 B 7 O 13 Br has been grown by a chemical transport reaction in closed quartz ampoules at 920 K. The crystal structure was characterized by Rietveld refinement. Ferroelectric nano and micro reorientable domains were found in this material using polarizing optical microscopy (PLM), scanning electron microscopy (SEM) and transmission electron microscopy (TEM). Chemical analysis was performed with x-ray energy dispersive spectroscopy (EDX). In the crystal, a new structure transition at 586 K from orthorhombic (Pca 2 1 ) to cubic cell (F4-bar3c) has been found. This transition was corroborated by differential scanning calorimetry (DSC)

  15. Plant virus-resembling optical nano-materials conjugated with anti-EGFR for targeted cancer imaging

    Science.gov (United States)

    Gupta, Sharad; Wilder, Hailey; Rao, A. L. N.; Vullev, V. I.; Anvari, Bahman

    2012-03-01

    We recently reported the construction of a new type of optically active nano-particles composed of genome-depleted plant infecting brome mosaic virus (BMV) doped with indocyanine green (ICG), an FDA-approved chromophore . We refer to these constructs as optical viral ghosts (OVGs) since only the capsid protein (CP) subunits of BMV remain to encapsulate ICG. Herein, we covalently conjugated the surface of OVGs with anti-epidermal growth factor receptors (anti-EGFR) to target cancerous human bronchial epithelial cells (C-HBECs) in-vitro. Our preliminary results demonstrate the utility of conjugated OVGs for targeted imaging of cancer cells.

  16. Contact Mechanics of a Small Icosahedral Virus

    Science.gov (United States)

    Zeng, Cheng; Hernando-Pérez, Mercedes; Dragnea, Bogdan; Ma, Xiang; van der Schoot, Paul; Zandi, Roya

    2017-07-01

    A virus binding to a surface causes stress of the virus cage near the contact area. Here, we investigate the potential role of substrate-induced structural perturbation in the mechanical response of virus particles to adsorption. This is particularly relevant to the broad category of viruses stabilized by weak noncovalent interactions. We utilize atomic force microscopy to measure height distributions of the brome mosaic virus upon adsorption from solution on atomically flat substrates and present a continuum model that captures our observations and provides estimates of elastic properties and of the interfacial energy of the virus, without recourse to indentation.

  17. Use of Cellular Decapping Activators by Positive-Strand RNA Viruses

    Directory of Open Access Journals (Sweden)

    Jennifer Jungfleisch

    2016-12-01

    Full Text Available Positive-strand RNA viruses have evolved multiple strategies to not only circumvent the hostile decay machinery but to trick it into being a priceless collaborator supporting viral RNA translation and replication. In this review, we describe the versatile interaction of positive-strand RNA viruses and the 5′-3′ mRNA decay machinery with a focus on the viral subversion of decapping activators. This highly conserved viral trickery is exemplified with the plant Brome mosaic virus, the animal Flock house virus and the human hepatitis C virus.

  18. Comparative assessment of the phytomeliorative efficiency of perennial grasses on chernozems in the transural part of Bashkortostan

    Science.gov (United States)

    Khasanova, R. F.; Suyundukov, Ya. T.; Suyundukova, M. B.

    2010-01-01

    The phytomeliorative efficiency of different groups of perennial herbs was studied. The agrophysical properties of soils under natural grasses (the feather grasses Stipa pennata, S. zalesskii, and S. Lessingiana; the fescue grass Festuca pseudovina; and quack grass), sawn herbs (awnless brome, crested wheat grass, purple alfalfa, the holy clover Onobrychis sibirica, the galega Galega orientalis, and yellow sweet clover), and cereal crops (winter rye and spring wheat) were compared. The formation of the aboveground and underground phytomass and the influence of phytomeliorative herbs on the aggregate state of leached, ordinary, and southern chernozems in the Transural part of Bashkortostan were analyzed.

  19. Nano and micro reoriented domains and their relation with the crystal structure in the new ferroelectric boracite Zn3B7O13Br

    Science.gov (United States)

    Campa-Molina, J.; Ulloa-Godínez, S.; Barrera, A.; Bucio, L.; Mata, J.

    2006-05-01

    A new zinc brome boracite Zn3B7O13Br has been grown by a chemical transport reaction in closed quartz ampoules at 920 K. The crystal structure was characterized by Rietveld refinement. Ferroelectric nano and micro reorientable domains were found in this material using polarizing optical microscopy (PLM), scanning electron microscopy (SEM) and transmission electron microscopy (TEM). Chemical analysis was performed with x-ray energy dispersive spectroscopy (EDX). In the crystal, a new structure transition at 586 K from orthorhombic (Pca 21) to cubic cell (F\\overline 4 3c ) has been found. This transition was corroborated by differential scanning calorimetry (DSC).

  20. Atlantis FLEX (BAY 22010 H – a new herbicide in cereals with efficacy against grasses

    Directory of Open Access Journals (Sweden)

    Kerlen, Dirk

    2014-02-01

    Full Text Available Atlantis FLEX (Mesosulfuron-methyl; Propoxycarbazone-sodium; Mefenpyr-diethyl is a new cereal herbicide to control blackgrass (Alopecurus myosuroides, ryegrass (Lolium spec., brome grass (Bromus spec., wild oat (Avena fatua, loose silky-bentgrass (Apera spica-venti L, annual meadow-grass (Poa annua L. and dicot weeds. Atlantis FLEX can be used in winter wheat, winter triticale, winter rye, winter durum wheat and spelt. The publication is based on efficacy trials from two years of spring application with Atlantis FLEX. It will be shown, that Atlantis FLEX generates a good to excellent efficacy against grass-weeds.

  1. Development and characterization of negative photochromic compounds

    Science.gov (United States)

    Ciapurin, Igor V.; Robu, Stephan V.; Rotari, Eugeniu V.; Korshak, Oleg Y.; Lessard, Roger A.

    2002-06-01

    We report a new photochromic composite polymer that was evaluated in conjunction with its potential applications for optical holographic recording in the whole visible spectral range. It consists of poly-N-epoxypropylcarbazole (PEPC) polymeric matrix with a nitro-brome-substituted spiropyran (BNSP) photochromic dye. The PEPC+BNSP films can be considered as negative photochromic recording media. They are colored in the initial state and bleached upon irradiation within the whole visible spectra. When we placed the bleached samples to the darkness, they slowly revert to the colored form. The real-time holographic recording procedure in PEPC+BNSP films was studied.

  2. Atlantis Star – a new herbicide in cereals with efficacy against grasses and dicots

    Directory of Open Access Journals (Sweden)

    Kerlen, Dirk

    2016-02-01

    Full Text Available Atlantis Star (mesosulfuron-methyl; iodosulfuron-methyl-sodium; thiencarbazone-methyl; mefenpyr-diethyl is a new cereal herbicide to control blackgrass (Alopecurus myosuroides; sensitive and high infestation, brome grass (Bromus spec., ryegrass (Lolium spec., wild oat (Avena fatua, loose silky-bentgrass (Apera spica-venti L., annual meadow-grass (Poa annua L. and dicot weeds. Atlantis Star can be used in winter wheat, winter triticale, winter rye, winter durum wheat and spelt. The publication is based on efficacy trials from two years of spring application with Atlantis Star.

  3. Modulation of leptin, insulin, and growth hormone in obese pony mares under chronic nutritional restriction and supplementation with ractopamine hydrochloride.

    Science.gov (United States)

    Buff, Preston R; Johnson, Philip J; Wiedmeyer, Charles E; Ganjam, Venkataseshu K; Messer Iv, Nat T; Keisler, Duane H

    2006-01-01

    Horses fed beyond their nutritional requirement and that are physically inactive will develop obesity, which is often accompanied by insulin resistance and heightened risk of laminitis. The use of pharmacologic agents in combination with nutritional restriction may promote weight loss in obese horses unable to exercise because of laminitic pain. This study shows that reducing feed intake of brome grass hay to 75% of ad libitum intake in obese pony mares reduces body weight without induced exercise. Additional supplementation of ractopamine hydrochloride for 6 weeks resulted in a tendency for increased weight loss. Subsequent modulation of obesity-associated hormones, leptin and insulin, as a result of caloric restriction was observed.

  4. Utilizing virus-induced gene silencing for the functional characterization of maize genes during infection with the fungal pathogen Ustilago maydis.

    Science.gov (United States)

    van der Linde, Karina; Doehlemann, Gunther

    2013-01-01

    While in dicotyledonous plants virus-induced gene silencing (VIGS) is well established to study plant-pathogen interaction, in monocots only few examples of efficient VIGS have been reported so far. One of the available systems is based on the brome mosaic virus (BMV) which allows gene silencing in different cereals including barley (Hordeum vulgare), wheat (Triticum aestivum), and maize (Zea mays).Infection of maize plants by the corn smut fungus Ustilago maydis leads to the formation of large tumors on stem, leaves, and inflorescences. During this biotrophic interaction, plant defense responses are actively suppressed by the pathogen, and previous transcriptome analyses of infected maize plants showed comprehensive and stage-specific changes in host gene expression during disease progression.To identify maize genes that are functionally involved in the interaction with U. maydis, we adapted a VIGS system based on the Brome mosaic virus (BMV) to maize at conditions that allow successful U. maydis infection of BMV pre-infected maize plants. This setup enables quantification of VIGS and its impact on U. maydis infection using a quantitative real-time PCR (q(RT)-PCR)-based readout.

  5. Rapid in vitro labeling procedures for two-dimensional gel fingerprinting

    International Nuclear Information System (INIS)

    Lee, Y.F.; Fowlks, E.R.

    1982-01-01

    Improvements of existing in vitro procedures for labeling RNA radioactively, and modifications of the two-dimensional polyacrylamide gel electrophoresis system for making RNA fingerprints are described. These improvements are (a) inactivation of phosphatase with nitric acid at pH 2.0 eliminated the phenol-cholorform extraction step during 5'-end labeling with polynucleotide kinase and [γ- 32 P]ATP; (b) ZnSO 4 inactivation of R Nase T 1 results in a highly efficient procedure for 3'-end labeling with T4 ligase and [5'- 32 P]pCp; and (c) a rapid 4-min procedure for variable quantity range of 125 I and RNA results in a qualitative and quantitative sample for high-molecular weight RNA fingerprinting. Thus, these in vitro procedures become rapid and reproducible when combined with two-dimensional gel electrophoresis which eliminates simultaneously labeled impurities. Each labeling procedure is compared, using tobacco mosaic virus, Brome mosaic virus, and polio RNA. A series of Ap-rich oligonucleotides was discovered in the inner genome of Brome mosaic Virus RNA-3

  6. Sperm morphological and morphometric evaluation in captive collared peccaries (Pecari tajacu

    Directory of Open Access Journals (Sweden)

    Patrícia C. Sousa

    2013-07-01

    Full Text Available The aim of this study was to compare different staining methods for the evaluation of sperm morphology by light microscopy and also to describe the morphometry of the entire sperm in collared peccaries (Pecari tajacu. Semen from 10 males was obtained by electroejaculation and evaluated for sperm motility, vigor, and concentration. Semen smears were prepared through three different staining methods: Bengal rose, brome-phenol blue, and eosin-nigrosin. Smears were evaluated under light microscopy and sperm morphologic alterations were determined in percentage. In addition, sperm morphometric analysis was conducted by light microscopy coupled to image analyzer software. The smears stained with Bengal Rose provide the best results for the visualization of the sperm tail, midpiece, and head. The use of eosin-nigrosin stain did not allow an adequate impregnation, and some sperm presented a few contrasts with the background. A higher incidence of bent coiled tails was verified in the use of brome-phenol blue staining (P<0.05. Through morphometric evaluation, it was observed that the tail occupies the greatest proportion (89% of the sperm which presents a discretely elongated head. According to the results, the use of the Bengal Rose stain is recommended for the morphologic evaluation of the collared peccary sperm.

  7. Efficacité de quelques herbicides des céréales dans une culture du blé tendre conduite en semis direct

    Directory of Open Access Journals (Sweden)

    Badr HAJJAJ

    2016-12-01

    Full Text Available In order to evaluate the efficacy of 11 cereal herbicides on no till soft wheat, two trials were conducted in Chaouia region during 2014-2015 growing season. Dominant species of weed flora in Sidi El Aidi site were: Bromus rigidus, Lolium rigidum and Avena sterilis. Dominant species of weed flora in Ouled Said site were: Avena sterilis, Centaurea diluta and Papaver rhoeas. The obtained results showed that “Pyroxsulam” and “Mesosulfuron Sodium + Iodosulfuron sodium” gavethe best efficacy on rip gut brome. Prosulfocarb provided excellent control of ryegrass but no effect on ripgut brome or wild oat. Broadleaf herbicides provided moderate to good control. “Mesosulfuron Sodium +Iodosulfuron sodium” need to be completed with an broadleaf herbicide in case centaurea diluta is present. “Pyroxsulam” need to be tank mixed with a broadleaf herbicide to widen its weeds spectrum. Treatment with “Pendimethalin”as pre-emergence herbicide allowed an early complete control of weeds and good crop selectivity.

  8. Near-saturated surface soil hydraulic properties under different land uses in the St Denis National Wildlife Area, Saskatchewan, Canada

    Science.gov (United States)

    Bodhinayake, Waduwawatte; Si, Bing Cheng

    2004-10-01

    Surface soil hydraulic properties are key factors controlling the partition of rainfall and snowmelt into runoff and soil water storage, and their knowledge is needed for sound land management. The objective of this study was to evaluate the effects of three land uses (native grass, brome grass and cultivated) on surface soil hydraulic properties under near-saturated conditions at the St Denis National Wildlife Area, Saskatchewan, Canada. For each land use, water infiltration rates were measured using double-ring and tension infiltrometers at -0.3, -0.7, -1.5 and -2.2 kPa pressure heads. Macroporosity and unsaturated hydraulic properties of the surface soil were estimated. Mean field-saturated hydraulic conductivity (Kfs), unsaturated hydraulic conductivity at -0.3 kPa pressure head, inverse capillary length scale () and water-conducting macroporosity were compared for different land uses. These parameters of the native grass and brome grass sites were significantly (p 1.36 × 10-4 m in diameter in the three land uses. Land use modified near-saturated hydraulic properties of surface soil and consequently may alter the water balance of the area by changing the amount of surface runoff and soil water storage.

  9. Seed ecology of Bromus sterilis L.

    Directory of Open Access Journals (Sweden)

    Žďárková, Veronika

    2014-02-01

    Full Text Available Bromus sterilis L. (barren brome has become a troublesome weed of winter cereals in reduced tillage systems, mainly in South and North America, middle and Western Europe. In the Czech Republic, its importance has increased dramatically over the past 10 years. Barren brome is reported as a problem weed in other winter crops such as oil seed rape, in vineyards and in other cultivated places. In this study, the dormancy and germination under different temperatures, water and light regimes were investigated. Emergence from different depths and persistence in the soil profile were investigated under field conditions. The seeds of Bromus sterilis showed broad ecological valence to hydrothermal factors germinating in the wide range of 5 to 35 °C. Similarly, no strong effect on the germination in an environment with low water potential was observed. The response to light at various temperatures showed that seeds germinated better in darkness. The emergence declined significantly with burial depth (under 40 mm. The loss of primary dormancy was rapid in time and only 50% of the seeds germinated within 8 weeks after collecting from maternal plants. The seeds were not able to survive in the soil seed bank for a longer time and fall seeds lost viability 1 year after burial in a soil profile.

  10. Comparing the hydrology of grassed and cultivated catchments in the semi-arid Canadian prairies

    Science.gov (United States)

    van der Kamp, G.; Hayashi, M.; Gallén, D.

    2003-02-01

    At the St Denis National Wildlife Area in the prairie region of southern Saskatchewan, Canada, water levels in wetlands have been monitored since 1968. In 1980 and 1983 a total of about one-third of the 4 km2 area was converted from cultivation to an undisturbed cover of brome grass. A few years after this conversion all the wetlands within the area of grass dried out; they have remained dry since, whereas wetlands in adjacent cultivated lands have held water as before. Field measurements show that introduction of undisturbed grass reduces water input to the wetlands mainly through a combination of efficient snow trapping and enhanced infiltration into frozen soil. In winter, the tall brome grass traps most of the snowfall, whereas in the cultivated fields more wind transport of snow occurs, especially for short stubble and fallow fields. Single-ring infiltration tests were conducted during snowmelt, while the soil was still frozen, and again in summer. The infiltrability of the frozen soil in the grassland is high enough to absorb most or all of the snowmelt, whereas in the cultivated fields the infiltration into the frozen soil is limited and significant runoff occurs. In summer, the infiltrability increases for the cultivated fields, but the grassland retains a much higher infiltrability than the cultivated land. The development of enhanced infiltrability takes several years after the conversion from cultivation to grass, and is likely due to the gradual development of macropores, such as root holes, desiccation cracks, and animal burrows.

  11. Modeling Phosphorus Capture by Plants Growing in a Multispecies Riparian Buffer

    Directory of Open Access Journals (Sweden)

    J. M. Kelly

    2012-01-01

    Full Text Available The NST 3.0 mechanistic nutrient uptake model was used to explore P uptake to a depth of 120 cm over a 126 d growing season in simulated buffer communities composed of mixtures of cottonwood (Populus deltoids Bartr., switchgrass (Panicum virgatum L., and smooth brome (Bromus inermis Leyss. Model estimates of P uptake from pure stands of smooth brome and cottonwood were 18.9 and 24.5 kg ha−1, respectively. Uptake estimates for mixed stands of trees and grasses were intermediate to pure stands. A single factor sensitivity analysis of parameters used to calculate P uptake for each cover type indicated that Imax, k, ro, and Lo were consistently the most responsive to changes ranging from −50% to +100%. Model exploration of P uptake as a function of soil depth interval indicated that uptake was highest in the 0–30 cm intervals, with values ranging from 85% of total for cottonwood to 56% for switchgrass.

  12. Control of invasive weeds with prescribed burning

    Science.gov (United States)

    DiTomaso, Joseph M.; Brooks, Matthew L.; Allen, Edith B.; Minnich, Ralph; Rice, Peter M.; Kyser, Guy B.

    2006-01-01

    Prescribed burning has primarily been used as a tool for the control of invasive late-season annual broadleaf and grass species, particularly yellow starthistle, medusahead, barb goatgrass, and several bromes. However, timely burning of a few invasive biennial broadleaves (e.g., sweetclover and garlic mustard), perennial grasses (e.g., bluegrasses and smooth brome), and woody species (e.g., brooms and Chinese tallow tree) also has been successful. In many cases, the effectiveness of prescribed burning can be enhanced when incorporated into an integrated vegetation management program. Although there are some excellent examples of successful use of prescribed burning for the control of invasive species, a limited number of species have been evaluated. In addition, few studies have measured the impact of prescribed burning on the long-term changes in plant communities, impacts to endangered plant species, effects on wildlife and insect populations, and alterations in soil biology, including nutrition, mycorrhizae, and hydrology. In this review, we evaluate the current state of knowledge on prescribed burning as a tool for invasive weed management.

  13. The Arabidopsis microtubule-associated protein MAP65-3 supports infection by filamentous biotrophic pathogens by down-regulating salicylic acid-dependent defenses.

    Science.gov (United States)

    Quentin, Michaël; Baurès, Isabelle; Hoefle, Caroline; Caillaud, Marie-Cécile; Allasia, Valérie; Panabières, Franck; Abad, Pierre; Hückelhoven, Ralph; Keller, Harald; Favery, Bruno

    2016-03-01

    The oomycete Hyaloperonospora arabidopsidis and the ascomycete Erysiphe cruciferarum are obligate biotrophic pathogens causing downy mildew and powdery mildew, respectively, on Arabidopsis. Upon infection, the filamentous pathogens induce the formation of intracellular bulbous structures called haustoria, which are required for the biotrophic lifestyle. We previously showed that the microtubule-associated protein AtMAP65-3 plays a critical role in organizing cytoskeleton microtubule arrays during mitosis and cytokinesis. This renders the protein essential for the development of giant cells, which are the feeding sites induced by root knot nematodes. Here, we show that AtMAP65-3 expression is also induced in leaves upon infection by the downy mildew oomycete and the powdery mildew fungus. Loss of AtMAP65-3 function in the map65-3 mutant dramatically reduced infection by both pathogens, predominantly at the stages of leaf penetration. Whole-transcriptome analysis showed an over-represented, constitutive activation of genes involved in salicylic acid (SA) biosynthesis, signaling, and defense execution in map65-3, whereas jasmonic acid (JA)-mediated signaling was down-regulated. Preventing SA synthesis and accumulation in map65-3 rescued plant susceptibility to pathogens, but not the developmental phenotype caused by cytoskeleton defaults. AtMAP65-3 thus has a dual role. It positively regulates cytokinesis, thus plant growth and development, and negatively interferes with plant defense against filamentous biotrophs. Our data suggest that downy mildew and powdery mildew stimulate AtMAP65-3 expression to down-regulate SA signaling for infection. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  14. Elevated genetic diversity in an F2:6 population of quinoa (Chenopodium quinoa) developed through an inter-ecotype cross

    DEFF Research Database (Denmark)

    Benlhabib, Ouafae; Boujartani, Noura; Maughan, Peter J

    2016-01-01

    for quantitative and qualitative traits. Impressive transgressive segregation was measured for seed yield (22.42 g/plant), while plant height and maturity had higher heritabilities (73 and 89%, respectively). Other notable characters segregating in the population included panicle and stem color, panicle form......, and resistance to downy mildew. In the Principal Component analysis, the first axis explained 74% of the total variation and was correlated to plant height, panicle size, stem diameter, biomass, mildew reaction, maturation, and seed yield; those traits are relevant discriminatory characters. Yield correlated...

  15. Economic issues and perspectives on innovation in new resistant grapevine varieties in France

    Directory of Open Access Journals (Sweden)

    Montaigne Etienne

    2016-12-01

    Full Text Available The arrival in France of new varieties resistant to downy mildew and powdery mildew calls into question the aims of this “revolution” in a sector dominated by tradition. The proposed evaluation reviews the historical experience of cross-breeding programmes from an evolutionist standpoint before analysing the responses to the new technological paradigm of resistance to disease. Taking account of the time periods, dating their implementation and describing the opportunities open to winemakers, the paper revisits the scientific controversies, the institutional blockages to be eliminated, the means of recognition and the prospects.

  16. Evidence for a race-specific resistance factor in some lettuce (Lactuca sativa L.) cultivars previously considered to be universally susceptible to Bremia lactucae regel.

    Science.gov (United States)

    Crute, I R; Lebeda, A

    1981-05-01

    Previously undetected race-specific resistance to Bremia lactucae (downy mildew) was located in many lettuce cultivars hitherto considered to be universally susceptible to this disease. This resistance factor(s) may also be widely distributed in other cultivars known to carry combinations of already recognised factors R1 to R11. Specific virulence to match this resistance is almost invariably present in pathogen collections. This situation may be either a relic of the evolutionary history of the B. lactucae - L. sativa asssociation or may reflect a rare mutation in B. lactucae for avirulence on all but a few specialised L. sativa genotypes.

  17. Modeling ecotoxicity impacts in vineyard production: Addressing spatial differentiation for copper fungicides

    DEFF Research Database (Denmark)

    Peña, Nancy; Antón, Assumpció; Kamilaris, Andreas

    2018-01-01

    Application of plant protection products (PPP) is a fundamental practice for viticulture. Life Cycle Assessment (LCA) has proved to be a useful tool to assess the environmental performance of agricultural production, where including toxicity-related impacts for PPP use is still associated...... with methodological limitations, especially for inorganic (i.e. metal-based) pesticides. Downy mildew is one of the most severe diseases for vineyard production. For disease control, copper-based fungicides are the most effective and used PPP in both conventional and organic viticulture. This study aims to improve...

  18. Video distribution system cost model

    Science.gov (United States)

    Gershkoff, I.; Haspert, J. K.; Morgenstern, B.

    1980-01-01

    A cost model that can be used to systematically identify the costs of procuring and operating satellite linked communications systems is described. The user defines a network configuration by specifying the location of each participating site, the interconnection requirements, and the transmission paths available for the uplink (studio to satellite), downlink (satellite to audience), and voice talkback (between audience and studio) segments of the network. The model uses this information to calculate the least expensive signal distribution path for each participating site. Cost estimates are broken downy by capital, installation, lease, operations and maintenance. The design of the model permits flexibility in specifying network and cost structure.

  19. Local infection of opium poppy leaves by Peronospora somniferi sporangia can give rise to systemic infections and seed infection in resistant cultivars

    Energy Technology Data Exchange (ETDEWEB)

    Montes-Borrego, M.; Muñoz-Ledesma, F.J.; Jiménez-Díaz, R.M.; Landa, B.B.

    2017-07-01

    Downy mildew (DM) of opium poppy (Papaver somniferum) caused by Peronospora somniferi is one of the most destructive diseases of this crop due to the systemic nature of infection as compared with local infections caused by Peronospora meconopsidis, the other downy mildew pathogen of this crop. We developed an inoculation method using Peronospora somniferi sporangia as inoculum and demonstrated for the first time that local infection of leaves by sporangia give rise to systemic infections in the plant as well as of seeds. Our results also showed that this inoculation protocol was very effective in reproducing disease symptoms and assessing the resistance response to DM in opium poppy genotypes under field conditions. More interestingly, results indicate that up to 100% of seed samples from some genotypes showing a complete (symptomless) resistant phenotype were infected by the pathogen when seeds were analyzed by a P. somniferi-specific nested-PCR protocol. This latter aspect deserves further attention while breeding opium poppy for resistance to P. somniferi.

  20. VineSens: An Eco-Smart Decision-Support Viticulture System

    Directory of Open Access Journals (Sweden)

    Josman P. Pérez-Expósito

    2017-02-01

    Full Text Available This article presents VineSens, a hardware and software platform for supporting the decision-making of the vine grower. VineSens is based on a wireless sensor network system composed by autonomous and self-powered nodes that are deployed throughout a vineyard. Such nodes include sensors that allow us to obtain detailed knowledge on different viticulture processes. Thanks to the use of epidemiological models, VineSens is able to propose a custom control plan to prevent diseases like one of the most feared by vine growers: downy mildew. VineSens generates alerts that warn farmers about the measures that have to be taken and stores the historical weather data collected from different spots of the vineyard. Such data can then be accessed through a user-friendly web-based interface that can be accessed through the Internet by using desktop or mobile devices. VineSens was deployed at the beginning in 2016 in a vineyard in the Ribeira Sacra area (Galicia, Spain and, since then, its hardware and software have been tested to prevent the development of downy mildew, showing during its first season that the system can led to substantial savings, to decrease the amount of phytosanitary products applied, and, as a consequence, to obtain a more ecologically sustainable and healthy wine.

  1. Transcriptome analysis of Phytophthora litchii reveals pathogenicity arsenals and confirms taxonomic status.

    Science.gov (United States)

    Sun, Jinhua; Gao, Zhaoyin; Zhang, Xinchun; Zou, Xiaoxiao; Cao, Lulu; Wang, Jiabao

    2017-01-01

    Litchi downy blight, caused by Peronophythora litchii, is one of the major diseases of litchi and has caused severe economic losses. P. litchii has the unique ability to produce downy mildew like sporangiophores under artificial culture. The pathogen had been placed in a new family Peronophytophthoraceae by some authors. In this study, the whole transcriptome of P. litchii from mycelia, sporangia, and zoospores was sequenced for the first time. A set of 23637 transcripts with an average length of 1284 bp was assembled. Using six open reading frame (ORF) predictors, 19267 representative ORFs were identified and were annotated by searching against several public databases. There were 4666 conserved gene families and various sets of lineage-specific genes among P. litchii and other four closely related oomycetes. In silico analyses revealed 490 pathogen-related proteins including 128 RXLR and 22 CRN effector candidates. Based on the phylogenetic analysis of 164 single copy orthologs from 22 species, it is validated that P. litchii is in the genus Phytophthora. Our work provides valuable data to elucidate the pathogenicity basis and ascertain the taxonomic status of P. litchii.

  2. Imbalanced lignin biosynthesis promotes the sexual reproduction of homothallic oomycete pathogens.

    Directory of Open Access Journals (Sweden)

    Michaël Quentin

    2009-01-01

    Full Text Available Lignin is incorporated into plant cell walls to maintain plant architecture and to ensure long-distance water transport. Lignin composition affects the industrial value of plant material for forage, wood and paper production, and biofuel technologies. Industrial demands have resulted in an increase in the use of genetic engineering to modify lignified plant cell wall composition. However, the interaction of the resulting plants with the environment must be analyzed carefully to ensure that there are no undesirable side effects of lignin modification. We show here that Arabidopsis thaliana mutants with impaired 5-hydroxyguaiacyl O-methyltransferase (known as caffeate O-methyltransferase; COMT function were more susceptible to various bacterial and fungal pathogens. Unexpectedly, asexual sporulation of the downy mildew pathogen, Hyaloperonospora arabidopsidis, was impaired on these mutants. Enhanced resistance to downy mildew was not correlated with increased plant defense responses in comt1 mutants but coincided with a higher frequency of oomycete sexual reproduction within mutant tissues. Comt1 mutants but not wild-type Arabidopsis accumulated soluble 2-O-5-hydroxyferuloyl-L-malate. The compound weakened mycelium vigor and promoted sexual oomycete reproduction when applied to a homothallic oomycete in vitro. These findings suggested that the accumulation of 2-O-5-hydroxyferuloyl-L-malate accounted for the observed comt1 mutant phenotypes during the interaction with H. arabidopsidis. Taken together, our study shows that an artificial downregulation of COMT can drastically alter the interaction of a plant with the biotic environment.

  3. Imbalanced lignin biosynthesis promotes the sexual reproduction of homothallic oomycete pathogens.

    Science.gov (United States)

    Quentin, Michaël; Allasia, Valérie; Pegard, Anthony; Allais, Florent; Ducrot, Paul-Henri; Favery, Bruno; Levis, Caroline; Martinet, Sophie; Masur, Clarissa; Ponchet, Michel; Roby, Dominique; Schlaich, Nikolaus L; Jouanin, Lise; Keller, Harald

    2009-01-01

    Lignin is incorporated into plant cell walls to maintain plant architecture and to ensure long-distance water transport. Lignin composition affects the industrial value of plant material for forage, wood and paper production, and biofuel technologies. Industrial demands have resulted in an increase in the use of genetic engineering to modify lignified plant cell wall composition. However, the interaction of the resulting plants with the environment must be analyzed carefully to ensure that there are no undesirable side effects of lignin modification. We show here that Arabidopsis thaliana mutants with impaired 5-hydroxyguaiacyl O-methyltransferase (known as caffeate O-methyltransferase; COMT) function were more susceptible to various bacterial and fungal pathogens. Unexpectedly, asexual sporulation of the downy mildew pathogen, Hyaloperonospora arabidopsidis, was impaired on these mutants. Enhanced resistance to downy mildew was not correlated with increased plant defense responses in comt1 mutants but coincided with a higher frequency of oomycete sexual reproduction within mutant tissues. Comt1 mutants but not wild-type Arabidopsis accumulated soluble 2-O-5-hydroxyferuloyl-L-malate. The compound weakened mycelium vigor and promoted sexual oomycete reproduction when applied to a homothallic oomycete in vitro. These findings suggested that the accumulation of 2-O-5-hydroxyferuloyl-L-malate accounted for the observed comt1 mutant phenotypes during the interaction with H. arabidopsidis. Taken together, our study shows that an artificial downregulation of COMT can drastically alter the interaction of a plant with the biotic environment.

  4. Hidden keys to survival: the type, density, pattern and functional role of emperor penguin body feathers.

    Science.gov (United States)

    Williams, Cassondra L; Hagelin, Julie C; Kooyman, Gerald L

    2015-10-22

    Antarctic penguins survive some of the harshest conditions on the planet. Emperor penguins breed on the sea ice where temperatures drop below -40°C and forage in -1.8°C waters. Their ability to maintain 38°C body temperature in these conditions is due in large part to their feathered coat. Penguins have been reported to have the highest contour feather density of any bird, and both filoplumes and plumules (downy feathers) are reported absent in penguins. In studies modelling the heat transfer properties and the potential biomimetic applications of penguin plumage design, the insulative properties of penguin plumage have been attributed to the single afterfeather attached to contour feathers. This attribution of the afterfeather as the sole insulation component has been repeated in subsequent studies. Our results demonstrate the presence of both plumules and filoplumes in the penguin body plumage. The downy plumules are four times denser than afterfeathers and play a key, previously overlooked role in penguin survival. Our study also does not support the report that emperor penguins have the highest contour feather density. © 2015 The Author(s).

  5. VineSens: An Eco-Smart Decision-Support Viticulture System.

    Science.gov (United States)

    Pérez-Expósito, Josman P; Fernández-Caramés, Tiago M; Fraga-Lamas, Paula; Castedo, Luis

    2017-02-25

    This article presents VineSens, a hardware and software platform for supporting the decision-making of the vine grower. VineSens is based on a wireless sensor network system composed by autonomous and self-powered nodes that are deployed throughout a vineyard. Such nodes include sensors that allow us to obtain detailed knowledge on different viticulture processes. Thanks to the use of epidemiological models, VineSens is able to propose a custom control plan to prevent diseases like one of the most feared by vine growers: downy mildew. VineSens generates alerts that warn farmers about the measures that have to be taken and stores the historical weather data collected from different spots of the vineyard. Such data can then be accessed through a user-friendly web-based interface that can be accessed through the Internet by using desktop or mobile devices. VineSens was deployed at the beginning in 2016 in a vineyard in the Ribeira Sacra area (Galicia, Spain) and, since then, its hardware and software have been tested to prevent the development of downy mildew, showing during its first season that the system can led to substantial savings, to decrease the amount of phytosanitary products applied, and, as a consequence, to obtain a more ecologically sustainable and healthy wine.

  6. Observations on the Behaviour of Different Populations of Plasmopara viticola Resistant to QoI Fungicides in Italian Vineyards

    Directory of Open Access Journals (Sweden)

    M.L. Gullino

    2004-12-01

    Full Text Available Grapevine downy mildew, caused by Plasmopara viticola, is probably the most damaging fungal disease of grapevine world-wide. Among the fungicides recently developed for downy mildew control is the QoI class of fungicides, which inhibits mitochondrial respiration. Since 1999, selected P. viticola populations in northern Italy have been monitored for resistance to QoI fungicides. Detached leaf discs and whole potted plants were used under controlled conditions to test the sampled populations. QoI-resistant populations of P. viticola were found in all the vineyards sampled in 2001 and 2002 in Trentino Alto Adige and Friuli Venezia Giulia, where failure in QoI control was reported. Many of the populations had minimum inhibition concentration (MIC values 3– 30 times higher than those of sensitive reference populations. Populations of P. viticola sampled from vineyards in Piedmont, where no QoI fungicides had previously been used, showed MIC values equal to, or lower than those of the reference populations. Most of the P. viticola populations collected in Trentino Alto Adige in 2001 showed high virulence in leaf disc test and were not controlled by QoI fungicides, applied both at field and double field rates in the whole plant test. Most of these populations retained their virulence in the subsequent leaf disc test in water.

  7. Optimization of the Extraction of Anthocyanins from the Fruit Skin of Rhodomyrtus tomentosa (Ait. Hassk and Identification of Anthocyanins in the Extract Using High-Performance Liquid Chromatography-Electrospray Ionization-Mass Spectrometry (HPLC-ESI-MS

    Directory of Open Access Journals (Sweden)

    Yuan-Ming Sun

    2012-05-01

    Full Text Available Anthocyanins are naturally occurring polyphenols that impart bright color to fruits, vegetables and plants. In this study, the extraction of anthocyanins from freeze-dried fruit skin of downy rose-myrtle (Rhodomyrtus tomentosa (Ait. Hassk var. Gangren was optimized using response surface methodology (RSM. Using 60% ethanol containing 0.1% (v/v hydrochloric acid as extraction solvent, the optimal conditions for maximum yields of anthocyanin (4.358 ± 0.045 mg/g were 15.7:1 (v/w liquid to solid ratio, 64.38 °C with a 116.88 min extraction time. The results showed good fits with the proposed model for the anthocyanin extraction (R2 = 0.9944. Furthermore, the results of high-performance liquid chromatography-electrospray ionization-mass spectrometry (HPLC-ESI-MS analysis of the anthocyanins extracted from the fruit skin of downy rose-myrtle revealed the presence of five anthocyanin components, which were tentatively identified as delphinidin-3-glucoside, cyanidin-3-glucoside, peonidin-3-glucoside, petunidin-3-glucoside and malvidin-3-glucoside.

  8. Cloning, Characterization, and Functional Investigation of VaHAESA from Vitis amurensis Inoculated with Plasmopara viticola

    Directory of Open Access Journals (Sweden)

    Shaoli Liu

    2018-04-01

    Full Text Available Plant pattern recognition receptors (PRRs are essential for immune responses and establishing symbiosis. Plants detect invaders via the recognition of pathogen-associated molecular patterns (PAMPs by PRRs. This phenomenon is termed PAMP-triggered immunity (PTI. We investigated disease resistance in Vitis amurensis to identify PRRs that are important for resistance against downy mildew, analyzed the PRRs that were upregulated by incompatible Plasmopara viticola infection, and cloned the full-length cDNA of the VaHAESA gene. We then analyzed the structure, subcellular localization, and relative disease resistance of VaHAESA. VaHAESA and PRR-receptor-like kinase 5 (RLK5 are highly similar, belonging to the leucine-rich repeat (LRR-RLK family and localizing to the plasma membrane. The expression of PRR genes changed after the inoculation of V. amurensis with compatible and incompatible P. viticola; during early disease development, transiently transformed V. vinifera plants expressing VaHAESA were more resistant to pathogens than those transformed with the empty vector and untransformed controls, potentially due to increased H2O2, NO, and callose levels in the transformants. Furthermore, transgenic Arabidopsis thaliana showed upregulated expression of genes related to the PTI pathway and improved disease resistance. These results show that VaHAESA is a positive regulator of resistance against downy mildew in grapevines.

  9. A de-novo-assembly-based Data Analysis Pipeline for Plant Obligate Parasite Metatranscriptomic Studies

    Directory of Open Access Journals (Sweden)

    Li Guo

    2016-07-01

    Full Text Available Current and emerging plant diseases caused by obligate parasitic microbes such as rusts, downy mildews, and powdery mildews threaten worldwide crop production and food safety. These obligate parasites are typically unculturable in the laboratory, posing technical challenges to characterize them at the genetic and genomic level. Here we have developed a data analysis pipeline integrating several bioinformatic software programs. This pipeline facilitates rapid gene discovery and expression analysis of a plant host and its obligate parasite simultaneously by next generation sequencing of mixed host and pathogen RNA (i.e. metatranscriptomics. We applied this pipeline to metatranscriptomic sequencing data of sweet basil (Ocimum basilicum and its obligate downy mildew parasite Peronospora belbahrii, both lacking a sequenced genome. Even with a single data point, we were able to identify both candidate host defense genes and pathogen virulence genes that are highly expressed during infection. This demonstrates the power of this pipeline for identifying genes important in host-pathogen interactions without prior genomic information for either the plant host or the obligate biotrophic pathogen. The simplicity of this pipeline makes it accessible to researchers with limited computational skills and applicable to metatranscriptomic data analysis in a wide range of plant-obligate-parasite systems.

  10. Local infection of opium poppy leaves by Peronospora somniferi sporangia can give rise to systemic infections and seed infection in resistant cultivars

    International Nuclear Information System (INIS)

    Montes-Borrego, M.; Muñoz-Ledesma, F.J.; Jiménez-Díaz, R.M.; Landa, B.B.

    2017-01-01

    Downy mildew (DM) of opium poppy (Papaver somniferum) caused by Peronospora somniferi is one of the most destructive diseases of this crop due to the systemic nature of infection as compared with local infections caused by Peronospora meconopsidis, the other downy mildew pathogen of this crop. We developed an inoculation method using Peronospora somniferi sporangia as inoculum and demonstrated for the first time that local infection of leaves by sporangia give rise to systemic infections in the plant as well as of seeds. Our results also showed that this inoculation protocol was very effective in reproducing disease symptoms and assessing the resistance response to DM in opium poppy genotypes under field conditions. More interestingly, results indicate that up to 100% of seed samples from some genotypes showing a complete (symptomless) resistant phenotype were infected by the pathogen when seeds were analyzed by a P. somniferi-specific nested-PCR protocol. This latter aspect deserves further attention while breeding opium poppy for resistance to P. somniferi.

  11. PLUTONIUM UPTAKE AND BEHAVIOR IN PLANTS OF THE DESERT SOUTHWEST: A PRELIMINARY ASSESSMENT

    Energy Technology Data Exchange (ETDEWEB)

    Caldwell, E.; Duff, M.; Ferguson, C.

    2011-03-01

    Eight species of desert vegetation and associated soils were collected from the Nevada National Security Site (N2S2) and analyzed for 238Pu and 239+240Pu concentrations. Amongst the plant species sampled were: atmospheric elemental accumulators (moss and lichen), the very slow growing, long-lived creosote bush and the rapidly growing, short-lived cheatgrass brome. The diversity of growth strategies provided insight into the geochemical behavior and bio-availability of Pu at the N2S2. The highest concentrations of Pu were measured in the onion moss (24.27 Bq kg-1 238Pu and 52.78 Bq kg-1 239+240Pu) followed by the rimmed navel lichen (8.18 Bq kg-1 and 18.4 Bq kg-1 respectively), pointing to the importance of eolian transport of Pu. Brome and desert globemallow accumulated between 3 and 9 times higher concentrations of Pu than creosote and sage brush species. These results support the importance of species specific elemental accumulation strategies rather than exposure duration as the dominant variable influencing Pu concentrations in these plants. Total vegetation elemental concentrations of Ce, Fe, Al, Sm and others were also analyzed. Strong correlations were observed between Fe and Pu. This supports the conclusion that Pu was accumulated as a consequence of the active accumulation of Fe and other plant required nutrients. Cerium and Pu are considered to be chemical analogs. Strong correlations observed in plants support the conclusion that these elements displayed similar geochemical behavior in the environment as it related to the biochemical uptake process of vegetation. Soils were also sampled in association with vegetation samples. This allowed for the calculation of a concentration ratio (CR). The CR values for Pu in plants were highly influenced by the heterogeneity of Pu distribution among sites. Results from the naturally occurring elements of concern were more evenly distributed between sample sites. This allowed for the development of a pattern of plant

  12. Ecophysiology of Trembling Aspen in Response to Root-Zone Conditions and Competition on Reclaimed Mine Soil.

    Science.gov (United States)

    Bockstette, S.; Landhäusser, S.; Pinno, B.; Dyck, M. F.

    2014-12-01

    Reclaimed soils are typically characterized by increased bulk densities, penetration resistances and poor soil structure as well as associated problems with hydrology and aeration. As a result, available rooting space for planted tree seedlings is often restricted to a shallow layer of topsoil, which is usually of higher quality and is cultivated prior to planting. This may hinder the development of healthy root systems, thus drastically increasing the risk for plant stress by limiting access to soil resources such as water, nutrients and oxygen. These problems are exacerbated when herbaceous plants compete for the same resources within this limited root-zone. To understand how limited rooting space affects the physiology of young trees, we experimentally manipulated soil conditions and levels of competition at a reclaimed mine site in central Alberta, Canada. The site was characterized by heavily compacted, fine textured subsoil (~2.0 Mg ha-1), capped with 15 cm of topsoil (~1.5 Mg ha-1). In a replicated study (n=6) half the plots were treated with a subsoil plow to a depth of about 60 cm to increase available rooting spece. Subsequently, trembling aspen (Populus tremuloides Michx.) and smooth brome (Bromus inermis L.) were planted to create four vegetation covers: aspen (a), brome (b), aspen + brome (ab) and control (c) (no vegetation). Various soil properties, including texture, bulk density, penetration resistance and water availability, in conjunction with plant parameters such as root and shoot growth, leaf area development, sap flow, and stomatal conductance have since been monitored, both in-situ and through destructive sampling. Our results indicate that the soil treatment was effective in lowering bulk densities and penetration resistance, while improving moisture retention characteristics. Tree seedling growth and leaf area development were significantly greater without competition, but did not differ between soil treatments. The soil treatment generally

  13. Mechanistic model of the inverted annular film boiling

    International Nuclear Information System (INIS)

    Seok, Ho; Chang, Soon Heung

    1989-01-01

    An analytical model is developed to predict the heat transfer coefficient and the friction factor in the inverted annular film boiling. The developed model is based on two-fluid mass, momentum and energy balance equations and a theoretical velocity profile. The predictions of the proposed model are compared with the experimental data and the well-established correlations. For the heat transfer coefficient, they agree with the experimental data and are more promising than those of Bromely and Berenson correlations. The present model also accounts the effects of the mass flux and subcooling on the heat transfer. The friction factor predictions agree qualitatively with the experimental measurements, while some cases show a similar behavior with those of the post-CHF dispersed flow obtained from Beattie's correlation

  14. Effect of capsid proteins to ICG mass ratio on fluorescent quantum yield of virus-resembling optical nano-materials

    Science.gov (United States)

    Gupta, Sharad; Ico, Gerardo; Matsumura, Paul; Rao, A. L. N.; Vullev, Valentine; Anvari, Bahman

    2012-03-01

    We recently reported construction of a new type of optical nano-construct composed of genome-depleted plant infecting brome mosaic virus (BMV) doped with Indocyanine green (ICG), an FDA-approved chromophore. We refer to these constructs as optical viral ghosts (OVGs) since only the capsid protein (CP) subunits of BMV remain to encapsulate ICG. To utilize OVGs as effective nano-probes in fluorescence imaging applications, their fluorescence quantum yield needs to be maximized. In this study, we investigate the effect of altering the CP to ICG mass ratio on the fluorescent quantum yield of OVGs. Results of this study provide the basis for construction of OVGs with optimal amounts of CP and ICG to yield maximal fluorescence quantum yield.

  15. Rehabilitation materials from surface- coal mines in western U.S.A. III. Relations between elements in mine soil and uptake by plants.

    Science.gov (United States)

    Severson, R.C.; Gough, L.P.

    1984-01-01

    Plant uptake of Cd, Co, Cu, Fe, Mn, Ni, Pb and Zn from mine soils was assessed using alfalfa Medicago sativa, sainfoin Onobrychis viciaefolia, smooth brome Bromus inermis, crested wheatgrass Agropyron cristatum, slender wheatgrass A. trachycaulum and intermediate wheatgrass A. intermedium; mine soil (cover-soil and spoil material) samples were collected from rehabilitated areas of 11 western US surface-coal mines in North Dakota, Montana, Wyoming and Colorado. Correlations between metals in plants and DTPA-extractable metals from mine soils were generally not statistically significant and showed no consistent patterns for a single metal or for a single plant species. Metal uptake by plants, relative to amounts in DTPA extracts of mine soil, was positively related to mine soil organic matter content or negatively related to mine soil pH. DTPA-extractable metal levels were significantly correlated with mine soil pH and organic-matter content.-from Authors

  16. The 'Big bang' in the Early Iron Age

    Directory of Open Access Journals (Sweden)

    Medović Aleksandar

    2010-01-01

    Full Text Available The Early Iron Age granaries of Tell Gradina upon Bosut exploded in a fire inferno in the 8th century B.C. The result of this catastrophe is 2-5 cm thick layer with mixed carbonized seeds and fruits. Recently, eight samples were taken from Gradina's profile for archaeobotanical analysis. The goal was to obtain basic information on land use and on major crops and weeds of that period. The most abundant were cereals, followed by millets, pulses and oil/fibre plants. The dominant cereals were einkorn (Triticum monococcum and hulled barley (Hordeum vulgare vulgare. Broomcorn millet (Panicum miliaceum was also very important. Pulses were represented with six and oil/fibre plants with three species. Among weeds and ruderals, most common are rye brome (Bromus secalinus, fat hen (Chenopodium album, darnel ryegrass (Lolium temulentum, hairy crabgrass (Digitaria sanguinalis and corncockle (Agrostemma githago.

  17. Formation of cogenetic quartz and nepheline syenites

    Science.gov (United States)

    Foland, K. A.; Landoll, J. D.; Henderson, C. M. B.; Chen, Jiangfeng

    1993-02-01

    Understanding the processes involved in the formation of cogenetic silica-undersaturated and silica-saturated felsic rocks in alkaline igneous complexes has been a long-standing enigma because of constraints imposed by phase equilibria relationships. This problem is discussed in general drawing upon relationships at two magmatic centers: Marangudzi in Zimbabwe and Mt. Brome in Quebec, Canada. At each locality, cogenetic quartz and nepheline syenites appear to be derived from common critically undersaturated magmas. Strontium and neodymium isotope results indicate that quartz syenites bear the signatures of substantial amounts of crustal assimilation whereas nepheline syenites lack or display lesser effects. In the model outlined, quartz syenite melts develop from felsic silica undersaturated magmas by assimilation of granitic crust coupled with fractional crystallization whereas nepheline syenites form without large amounts of contamination. This model is compatible with the constraints imposed by phase equilibria.

  18. Differential Thermal Analysis and Dielectric Studies on 2-Methyl-2-Nitro-Propane under High Pressure

    Science.gov (United States)

    Büsing, D.; Jenau, M.; Reuter, J.; Würflinger, A.; Tamarit, J. Li.

    1995-05-01

    Differential thermal analysis and dielectric studies under pressures up to 300 MPa and temperatures of about 200 to 350 K have been performed on 2-methyl-2-nitro-propane (TBN). TBN displays an orientationally disordered phase (ODIC), solid I, and two non-plastic phases, solids II and III. The coexistence region of the plastic phase I increases with increasing pressure, whereas the low-temperature phase II apparently vanishes at a triple point I, II, III, above 300 MPa. The static permittivity increases on freezing, characterizing the solid I as an ODIC phase. In the frame of the Kirkwood-Onsager-Fröhlich theory the g-factor is about unity, discounting specific dielectric correlations. The dielectric behaviour of TBN is similar to previously studied related compounds, such as 2-chloro-2-methyl-propane or 2-brome- 2-methyl-propane

  19. Comparison of selected parameters of biomass and coal

    Science.gov (United States)

    Lalak, Justyna; Martyniak, Danuta; Kasprzycka, Agnieszka; Żurek, Grzegorz; Moroń, Wojciech; Chmielewska, Mariola; Wiącek, Dariusz; Tys, Jerzy

    2016-10-01

    As a fuel, biomass differs in its properties from fossil fuels and acquisition thereof for energy purposes is limited; hence, the ongoing search for new bioenergetically useful plants. The article presents the results of physical and chemical analyses of seven species of perennial grasses: tall wheatgrass, tall wheatgrass `Bamar', brome grass, tall fescue ecotype, reed canary grass, giant miscanthus, and sorghum. The research involved technical and elemental analysis as well as analysis of the ash composition performed in order to determine their potential use for combustion process. The measurement results were compared with those obtained for hard coal and agricultural biomass, which is widely used in the energy industry. The results suggest that perennial grasses can successfully be combusted with similar performance to coal if burned in appropriate combustion installations.

  20. Forty years of vegetation change on the Missouri River floodplain

    Science.gov (United States)

    Johnson, W. Carter; Dixon, Mark D.; Scott, Michael L.; Rabbe, Lisa; Larson, Gary; Volke, Malia; Werner, Brett

    2012-01-01

    Comparative inventories in 1969 and 1970 and in 2008 of vegetation from 30 forest stands downstream of Garrison Dam on the Missouri River in central North Dakota showed (a) a sharp decline in Cottonwood regeneration; (b) a strong compositional shift toward dominance by green ash; and (c) large increases in invasive understory species, such as smooth brome, reed canary grass, and Canada thistle. These changes, and others discovered during remeasurement, have been caused by a complex of factors, some related to damming (altered hydrologic and sediment regimes, delta formation, and associated wet-dry cycles) and some not (diseases and expansion of invasive plants). Dominance of green ash, however, may be short lived, given the likelihood that the emerald ash borer will arrive in the Dakotas in 5-10 years, with potentially devastating effects. The prospects for recovery of this valuable ecosystem, rich in ecosystem goods and services and in American history, are daunting.

  1. Biological activity of the humus horizon of ordinary chernozems as an indicator of the ecological state of agroecosystems in Bashkortostan

    Science.gov (United States)

    Khasanova, R. F.; Suyundukov, Ya. T.; Semenova, I. N.

    2014-08-01

    A comparative analysis of the biological activity has been performed in the soils of Transural Bashkiria developing under natural perennial grasses and under sown herbs. It is shown that the structure of the microbial community in the soils under natural perennial grasses (fescue, brome grass, and couch grass) prevents the removal of nitrogen from the ecosystem and favors nitrogen fixation in the microbial pool of the trophic chain. The method of multisubstrate testing points to certain differences between the metabolic potentials of the microbial communities of the soils under natural grasses and sown herbs. The high values of the integral index of health of the microbial system in the soils under natural perennial grasses attests to their efficiency in sustaining the soil fertility.

  2. Systemic transport of Alfalfa mosaic virus can be mediated by the movement proteins of several viruses assigned to five genera of the 30K family.

    Science.gov (United States)

    Fajardo, Thor V M; Peiró, Ana; Pallás, Vicente; Sánchez-Navarro, Jesús

    2013-03-01

    We previously showed that the movement protein (MP) gene of Alfalfa mosaic virus (AMV) is functionally exchangeable for the cell-to-cell transport of the corresponding genes of Tobacco mosaic virus (TMV), Brome mosaic virus, Prunus necrotic ringspot virus, Cucumber mosaic virus and Cowpea mosaic virus. We have analysed the capacity of the heterologous MPs to systemically transport the corresponding chimeric AMV genome. All MPs were competent in systemic transport but required the fusion at their C terminus of the coat protein-interacting C-terminal 44 aa (A44) of the AMV MP. Except for the TMV MP, the presence of the hybrid virus in upper leaves correlated with the capacity to move locally. These results suggest that all the MPs assigned to the 30K superfamily should be exchangeable not only for local virus movement but also for systemic transport when the A44 fragment is present.

  3. Compactness of viral genomes: effect of disperse and localized random mutations

    Science.gov (United States)

    Lošdorfer Božič, Anže; Micheletti, Cristian; Podgornik, Rudolf; Tubiana, Luca

    2018-02-01

    Genomes of single-stranded RNA viruses have evolved to optimize several concurrent properties. One of them is the architecture of their genomic folds, which must not only feature precise structural elements at specific positions, but also allow for overall spatial compactness. The latter was shown to be disrupted by random synonymous mutations, a disruption which can consequently negatively affect genome encapsidation. In this study, we use three mutation schemes with different degrees of locality to mutate the genomes of phage MS2 and Brome Mosaic virus in order to understand the observed sensitivity of the global compactness of their folds. We find that mutating local stretches of their genomes’ sequence or structure is less disruptive to their compactness compared to inducing randomly-distributed mutations. Our findings are indicative of a mechanism for the conservation of compactness acting on a global scale of the genomes, and have several implications for understanding the interplay between local and global architecture of viral RNA genomes.

  4. Gerenciamento de resíduos químicos e águas servidas no laboratório de isótopos estáveis do CENA/USP Chemistry waste and residues waters management at the stable isotope laboratory of the CENA/USP

    Directory of Open Access Journals (Sweden)

    José Albertino Bendassolli

    2003-08-01

    Full Text Available A system for disposal and recovery of the main effluents and chemical waist from isotope separation plants and enriched compounds-15N and 34S production has been carried out at the Stable Isotope Laboratory (LIE of the CENA/USP. Around four hundred thousand liters of effluents has been recovered yearly. Among the recovered chemical wastes, the more relevant are: ammonia; brome; ammonium and sodium sulfate; sodium hydroxide; sulfur dioxide; and hydrochloric acid. Chemical wastes containg recoverable heavy metals (Ag, Cr and Cu and solvents (methanol, ethanol and acetone are processed and recovered. Gaseous emissions, mainly H2S are used for recovery of heavy metals solutions. The minimization of the residues waters, as well the reduction of electric energy consume was established using a water deionization system. A cost/effect balance of the process is reported.

  5. Treatment of depression.

    Science.gov (United States)

    Payk, T R

    1994-10-01

    Depressions are the most common psychiatric diseases. For treatment, plant extracts have been used for thousands of years: examples are extracts from the (sleeping) poppy (opium), deadly nightshade (Atropa belladonna), Indian hemp (hashish), henbane (hyoscyamine), thorn apple (scopolamine), and St. John's wort (hypericum oil). In addition, psychotherapeutic measures, like playing music, dancing, playing theatre, and also the temple sleep, were used. In the 19th century, the introduction of brome (1826), codeine (1832), chloral hydrate (1869), and paraldehyde (1882), as well as the barbiturates (at the turn of the century) introduced significant improvements in pharmacotherapy. The modern thymoleptica therapy started in 1957 with the introduction of imipramine. Now about 40 active antidepressants are marketed. New drug developments should be characterized mainly by an improvement in tolerance.

  6. The influence of cover crops and tillage on actual and potential soil erosion in an olive grove

    Science.gov (United States)

    Sastre, Blanca; Bienes, Ramón; García-Díaz, Andrés; Panagopoulos, Thomas; José Marqués, Maria

    2014-05-01

    The study was carried out in an olive grove in central Spain (South of Madrid; Tagus River Basin). In this semi-arid zone, the annual mean temperature is 13.8 ºC and the annual precipitation is 395 mm. Olive groves are planted in an erosion prone area due to steep slopes up to 15%. Soil is classified as Typic Haploxerept with clay loam texture. The land studied was formerly a vineyard, but it was replaced by the studied olive grove in 2004. It covers approximately 3 ha and olive trees are planted every 6 x 7 metres. They were usually managed by tillage to decrease weed competition. This conventional practice results in a wide surface of bare soil prone to erosion processes. In the long term soil degradation may lead to increase the desertification risk in the area. Storms have important consequences in this shallow and vulnerable soil, as more than 90 Mg ha-1 have been measured after one day with 40 mm of rainfall. In order to avoid this situation, cover crops between the olive trees were planted three years ago: sainfoin (Onobrychis viciifolia), barley (Hordeum vulgare), and purple false brome (Brachypodium distachyon), and they were compared with annual spontaneous vegetation after a minimum tillage treatment (ASV). The results regarding erosion control were positive. We observed (Oct. 2012/Sept. 2013) annual soil loss up to 11 Mg ha-1 in ASV, but this figure was reduced in the sown covers, being 8 Mg ha-1 in sainfoin treatment, 3,7 Mg ha-1 in barley treatment, and only 1,5 Mg ha-1 in false brome treatment. Those results are used to predict the risk of erosion in long term. Moreover, soil organic carbon (SOC) increased with treatments, this is significant as it reduces soil erodibility. The increases were found both in topsoil (up to 5 cm) and more in depth, in the root zone (from 5 to 10 cm depth). From higher to lower SOC values we found the false brome (1.05%), barley (0.92%), ASV (0.79%) and sainfoin (0.71%) regarding topsoil. In the root zone (5-10 cm depth

  7. Use of image analysis to assess color response on plants caused by herbicide application

    DEFF Research Database (Denmark)

    Asif, Ali; Streibig, Jens Carl; Duus, Joachim

    2013-01-01

    by herbicides. The range of color components of green and nongreen parts of the plants and soil in Hue, Saturation, and Brightness (HSB) color space were used for segmentation. The canopy color changes of barley, winter wheat, red fescue, and brome fescue caused by doses of a glyphosate and diflufenican mixture...... for the green and nongreen parts of the plants and soil were different. The relative potencies were not significantly different from one, indicating that visual and image analysis estimations were about the same. The comparison results suggest that image analysis can be used to assess color changes of plants......In herbicide-selectivity experiments, response can be measured by visual inspection, stand counts, plant mortality, and biomass. Some response types are relative to nontreated control. We developed a nondestructive method by analyzing digital color images to quantify color changes in leaves caused...

  8. Radiobiological and genetic effects of Bromus inermis seed progeny from populations of the East-Ural Radioactive Trace (Russia, Kyshtym accident) - Radiobiological and genetic effects for Bromus inermis Leyss. Populations at the East-Ural radioactive trace (Russia, Kyshtym accident in 1957)

    Energy Technology Data Exchange (ETDEWEB)

    Antonova, Elena V.; Pozolotna, Vera N. [Institute of Plant and Animal Ecology UB RAS, 8 Marta str. 202, 620144, Ekaterinburg (Russian Federation); Karimullina, Elina M. [Institute of Plant and Animal Ecology UB RAS, 8 Marta str. 202, 620144, Ekaterinburg (Russian Federation); Department of Developmental and Cell Biology, University of California, 2011 Biological Sciences III, Irvine, CA 92697-2300 (United States); Roeder, Marion S. [Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstrasse 3, D-06466, Gatersleben (Germany)

    2014-07-01

    This investigation dedicates the problem of remote consequences of radiation impact on plant populations. This is a part of a complex research, which includes the classic triad of radioecology (Timofeev-Ressovsky 1963): 'accumulation and migration of radionuclides in different components of ecosystems - assessment of radiation dose - investigation of radiobiological effects'. We used the populations of smooth brome (Bromus inermis Leyss.) as a model system for the investigation of radiobiological and genetic effects. It is radiosensitive plant (Preobrazhenskaya 1971). These species may be used as objects for bio-indication at the radioactive contaminated areas, and as well as large-scale radioecological studies, because the adaptation processes are faster for radiosensitive species (Shevchenko et al., 1992; Pozolotina et al. 2005). We calculated external and internal whole-body dose rates by ERICA Tool (Karimullina et al., 2013). The total dose rate for brome was under 100 mGy h{sup -1} at the most polluted site but 43-110 times (Tier 3) exceeded the background along the pollution gradient. Therefore it can be concluded that herbaceous plant populations currently exist under low level chronic exposure at the EURT area. During seven years we have studied variability of viability, mutability and radioresistance of brome seed progeny. The combined effects of radiation exposure and weather conductions at the EURT area were absent. It may be connect with wide variability of inter-population test parameters. At the same time the weather conductions had an influence on the quality of seed progeny at the background area. We analyzed also correlation between original viability and radioresistance of seed progeny from the all plots. This dependence was positive. It was shown negative dependence between original viability of seed progeny and low weight molecular antioxidants content too. Ionizing radiation is a mutagenic factor and, accordingly, elevated mutation

  9. Neutron Spectrometry Work at the CNEN; La spectrometrie neutronique au CNEN; Raboty po nejtronnoj spektrometrii v nkyaeh; Trabajos de espectrometria neutronica realizados en el CNEN

    Energy Technology Data Exchange (ETDEWEB)

    Caglioti, G; Ascarelli, P [Comitato Nazionale per L' energia Nucleare Euratom, G. C. R. Ispra, Varese (Italy)

    1963-01-15

    In this communication the main features of the triple axis spectrometer recently installed at the Ispra-1 reactor are presented. Preliminary results in the quasi elastic angular distribution of 1.4A neutrons scattered in liquid bromine are shown and briefly discussed. (author) [French] Dans ce memoire, l'auteur decrit les principales caracteristiques du spectrometre triaxial installe recemment au reacteur Ispra-1. Il donne et examine brievement les resultats preliminaires des experiences sur la distribution angulaire quasi elastique de neutrons de 1.4A a diffuses dans du brome liquide. (author) [Spanish] La memoria describe las principales caracteristicas del espectrometro triaxial recientemente instalado en el reactor lspra-1. Asimismo, expone brevemente los resultados iniciales de las determinaciones de distribucion angular de neutrones de 1,4 A dispersados en forma cuasi elastica por bromo liquido. (author)

  10. 17O NMR parameters of some substituted benzyl ethers components: Ab initio study

    Directory of Open Access Journals (Sweden)

    Mahdi Rezaei Sameti

    2016-09-01

    Full Text Available The 17O NMR chemical shielding tensors and chemical shift for a set of substituted benzyl ethers derivatives containing (methyl, ethyl, isopropyl, t-butyl, brome and lithium have been calculated. The molecular structures were fully optimized using B3LYP/6-31G(d,p. The calculation of the 17O shielding tensors employed the GAUSSIAN 98 implementation of the gauge-including atomic orbital (GIAO and continuous set of gauge transformations (CSGT by using 6-31G (d,p, 6-31++G(d,p and 6-311++G(d,p basis set methods at density functional levels of theories (DFT. The values determined using the GIAO and CSGT were found to give a good agreement with the experimental chemical shielding.

  11. Delineating the structural, functional and evolutionary relationships of sucrose phosphate synthase gene family II in wheat and related grasses

    Directory of Open Access Journals (Sweden)

    Khalil Zaynali

    2010-06-01

    Full Text Available Abstract Background Sucrose phosphate synthase (SPS is an important component of the plant sucrose biosynthesis pathway. In the monocotyledonous Poaceae, five SPS genes have been identified. Here we present a detailed analysis of the wheat SPSII family in wheat. A set of homoeologue-specific primers was developed in order to permit both the detection of sequence variation, and the dissection of the individual contribution of each homoeologue to the global expression of SPSII. Results The expression in bread wheat over the course of development of various sucrose biosynthesis genes monitored on an Affymetrix array showed that the SPS genes were regulated over time and space. SPSII homoeologue-specific assays were used to show that the three homoeologues contributed differentially to the global expression of SPSII. Genetic mapping placed the set of homoeoloci on the short arms of the homoeologous group 3 chromosomes. A resequencing of the A and B genome copies allowed the detection of four haplotypes at each locus. The 3B copy includes an unspliced intron. A comparison of the sequences of the wheat SPSII orthologues present in the diploid progenitors einkorn, goatgrass and Triticum speltoides, as well as in the more distantly related species barley, rice, sorghum and purple false brome demonstrated that intronic sequence was less well conserved than exonic. Comparative sequence and phylogenetic analysis of SPSII gene showed that false purple brome was more similar to Triticeae than to rice. Wheat - rice synteny was found to be perturbed at the SPS region. Conclusion The homoeologue-specific assays will be suitable to derive associations between SPS functionality and key phenotypic traits. The amplicon sequences derived from the homoeologue-specific primers are informative regarding the evolution of SPSII in a polyploid context.

  12. Soil Seed Bank Responses to Postfire Herbicide and Native Seeding Treatments Designed to Control Bromus tectorum in a Pinyon–Juniper Woodland at Zion National Park, USA

    Science.gov (United States)

    Brooks, Matthew L.; Hondo Brisbin, graduate student; Andrea Thode, Associate Professor; Karen Weber, graduate student

    2013-01-01

    The continued threat of an invasive, annual brome (Bromus) species in the western United States has created the need for integrated approaches to postfire restoration. Additionally, the high germination rate, high seed production, and seed bank carryover of annual bromes points to the need to assay soil seed banks as part of monitoring programs. We sampled the soil seed bank to help assess the effectiveness of treatments utilizing the herbicide Plateau® (imazapic) and a perennial native seed mix to control annual Bromus species and enhance perennial native plant establishment following a wildfire in Zion National Park, Utah. This study is one of few that have monitored the effects of imazapic and native seeding on a soil seed bank community and the only one that we know of that has done so in a pinyon–juniper woodland. The study made use of untreated, replicated controls, which is not common for seed bank studies. One year posttreatment, Bromus was significantly reduced in plots sprayed with herbicide. By the second year posttreatment, the effects of imazapic were less evident and convergence with the controls was evident. Emergence of seeded species was low for the duration of the study. Dry conditions and possible interactions with imazapic probably contributed to the lack of emergence of seeded native species. The perennial grass sand dropseed outperformed the other species included in the seed mix. We also examined how the treatments affected the soil seed bank community as a whole. We found evidence that the herbicide was reducing several native annual forbs and one nonnative annual forb. However, overall effects on the community were not significant. The results of our study were similar to what others have found in that imazapic is effective in providing a short-term reduction in Bromus density, although it can impact emergence of nontarget species.

  13. Calibration of an integrated land surface process and radiobrightness (LSP/R) model during summertime

    Science.gov (United States)

    Judge, Jasmeet; England, Anthony W.; Metcalfe, John R.; McNichol, David; Goodison, Barry E.

    2008-01-01

    In this study, a soil vegetation and atmosphere transfer (SVAT) model was linked with a microwave emission model to simulate microwave signatures for different terrain during summertime, when the energy and moisture fluxes at the land surface are strong. The integrated model, land surface process/radiobrightness (LSP/R), was forced with weather and initial conditions observed during a field experiment. It simulated the fluxes and brightness temperatures for bare soil and brome grass in the Northern Great Plains. The model estimates of soil temperature and moisture profiles and terrain brightness temperatures were compared with the observed values. Overall, the LSP model provides realistic estimates of soil moisture and temperature profiles to be used with a microwave model. The maximum mean differences and standard deviations between the modeled and the observed temperatures (canopy and soil) were 2.6 K and 6.8 K, respectively; those for the volumetric soil moisture were 0.9% and 1.5%, respectively. Brightness temperatures at 19 GHz matched well with the observations for bare soil, when a rough surface model was incorporated indicating reduced dielectric sensitivity to soil moisture by surface roughness. The brightness temperatures of the brome grass matched well with the observations indicating that a simple emission model was sufficient to simulate accurate brightness temperatures for grass typical of that region and surface roughness was not a significant issue for grass-covered soil at 19 GHz. Such integrated SVAT-microwave models allow for direct assimilation of microwave observations and can also be used to understand sensitivity of microwave signatures to changes in weather forcings and soil conditions for different terrain types.

  14. Mechanisms Controlling Species Responses to Climate Change: Thermal Tolerances and Shifting Range Limits. (Invited)

    Science.gov (United States)

    Sage, R. F.; Bykova, O.; Coiner, H.

    2010-12-01

    One of the main effects of anthropogenic climate change will be widespread shifts in species distribution, with the common assumption that they will migrate to higher elevation and latitude. While this assumption is supported by migration patterns following climate warming in the past 20,000 years, it has not been rigorously evaluated in terms of physiological mechanism, despite the implication that migration in response to climate warming is controlled by some form of thermal adaptation. We have been evaluating the degree to which species range limits are controlled by physiological patterns of thermal tolerance in bioinvaders of North America. Bioinvaders presumably have few biotic controls over their distribution and thus are more likely to fully exploit their thermal niche. In cheatgrass (Bromus tectorum), the minimum lethal temperature in winter is -32C, which corresponds to the mean winter minimum temperature at its northern range limit. In red brome (Bromus rubens), the minimum lethal temperature is also near -32C, which is well below the minimum winter temperature near -20C that corresponds to its northern distribution limit. In kudzu (Pueraria lobata), the minimum lethal temperature is near -20C, which corresponds to the midwinter minimum at its northern distribution limit; however, overwintering kudzu tissues are insulated by soil and snow cover, and thus do not experience lethal temperatures at kudzu's northern range limit. These results demonstrate that some invasive species can exploit the potential range defined by their low temperature tolerance and thus can be predicted by mechanistic models to migrate to higher latitudes with moderation of winter cold. The distribution of other invaders such as kudzu and red brome are not controlled by tolerance of midwinter cold. Developing mechanistic models of their distributions, and how these might change with climate warming, will require extensive physiological study.

  15. The use of less common grass varieties as a factor of increasing forage lands productivity

    Directory of Open Access Journals (Sweden)

    В. Д. Бугайов

    2017-03-01

    Full Text Available Purpose. To assess introduced samples of drought-resistant species of perennial grasses, select a promising parent material and create on its base high-yielding varie­ ies with economic characters. Methods. Field experiment, laboratory testing. Results. The results of studies on introduction and breeding were given aimed to improve drought tolerance of non-traditional perennial grasses under the conditions of the Right-Bank Forest-Steppe zone of Ukraine. Based on the selected parent material, varieties were created by the use of hybridization and ecotype breeding methods and then entered into the State Register of plant varieties suitable for dissemination in Ukraine, among them: intermediate wheatgrass (Elytrigia intermedia (Host Nevski – ‘Hors’, crested wheatgrass (Agropyron cristatum (L. Gaertn. – ‘Petrivskyi’; meadow brome (Bromus riparia Rehm. – ‘Boian’; slender wheatgrass (Roegneria trachycaulon (Link Nevski – ‘Co­umb’. As compared with conventional, relatively drought-tolerant species of smooth brome (Bromopsis inermis (Leyss. Holub – ‘Mars’, increment of dry matter content of these species in the extreme drought conditions of 2011 was increased by 1,52–3,73 t/ha. Under more sufficient moistening conditions of 2012, slender wheatgrass ‘Columb’ was at the level of the сheck variety in terms of this indicator. Other varieties exceeded it by 1.44–3.22 t/ha. The data was given including seed productivity and sowing quality indicators, after-ripening duration and economic fitness of seeds. Conclusions. The use of the recommended varieties of drought-resistant species of perennial grasses as part of grass mixtures will increase significantly the productivity of grasslands and pastures in the current context of climate change.

  16. Influence of richness and seeding density on invasion resistance in experimental tallgrass prairie restorations

    Science.gov (United States)

    Nemec, Kristine T.; Allen, Craig R.; Helzer, Christopher J.; Wedin, David A.

    2013-01-01

    In recent years, agricultural producers and non-governmental organizations and agencies have restored thousands of hectares of cropland to grassland in the Great Plains of the United States. However, little is known about the relationships between richness and seeding density in these restorations and resistance to invasive plant species. We assessed the effects of richness and seeding density on resistance to invasive and other unseeded plant species in experimental tallgrass prairie plots in central Nebraska. In 2006, twenty-four 55 m × 55 m plots were planted with six replicates in each of four treatments: high richness (97 species typically planted by The Nature Conservancy), at low and high seeding densities, and low richness (15 species representing a typical Conservation Reserve Program mix, CP25), at low and high seeding densities. There was a significant negative relationship between richness and basal cover of unseeded perennial forbs/legumes and unseeded perennial/annual grasses, abundance of bull thistle (Cirsium vulgare), and the number of inflorescences removed from smooth brome (Bromus inermis) transplants. Invasion resistance may have been higher in the high richness treatments because of the characteristics of the dominant species in these plots or because of greater interspecific competition for limiting resources among forbs/legumes with neighboring plants belonging to the same functional group. Seeding density was not important in affecting invasion resistance, except in the cover of unseeded grasses. Increasing seed mix richness may be more effective than increasing the seeding density for decreasing invasion by unseeded perennial species, bull thistle, and smooth brome.

  17. A deeper look at the response of oxygenated and non oxygenated VOC to mid-term drought over the seasonal cycle: the case study of a drought-resistant species

    Science.gov (United States)

    Saunier, Amelie; Ormeño Lafuente, Elena; Wortham, Henri; Temime-Roussel, Brice; Fernandez, Catherine

    2015-04-01

    At the end of this century, climatic models plan an intensification of summer drought in the Mediterranean area due to a 30% rain reduction and a temperature rise of 3.4 °C. Plants respond to drought by modifying their primary (growth) and their secondary metabolism, the later being partly represented by volatile organic compound (VOC) emissions, such as terpenes. With drought, oxygenated and non oxygenated terpene emissions have been observed to increase, decrease or remain unchanged according to drought severity and vegetal model. By contrast, the response of non-terpenic oxygenated compounds to drought has been poorly studied. The aim of this study is to determine the potential impact of a two-year drought period on the full screen of VOC released by Q. pubescens, with a focus on both isoprene and methanol, issued from plant anabolism , and the numerous highly volatile oxygenated VOC, issued from plant catabolism (i.e. issued from oxidation of isoprene or methanol). A 70 years-old Downy oak forest (Quercus pubescens), highly resistant to drought stress, was selected as model ecosystem since it is well widespread in Southern France occupying 321 000 ha. Downy oak also represents the major source of isoprene emissions in the Mediterranean area and, unlike the other major Quercus sp. of the region (i.e. Quercus ilex, a monoterpene emitter) the impact of watering withholding over years has never been tackled. The study was performed at the experimental platform of O3HP (Oak Observatory at Observatoire de Haute Provence) in Southern France which is equipped with both a rain exclusion (by 30 %) and a rain addition structure (simulating the rainiest years of the region), allowing for comparison with naturally watered trees. Using dynamic enclosure chambers at the branch level and PTR-MS-Q-ToF, we screened the anabolic VOC (isoprene, methanol) and the catabolic VOC (e.g. methacrolein, methyl vinyl ketone, C6 aldehydes and carboxylic acids) of trees located under the

  18. Recycling of wood- and peat-ash. A successful way to establish full plant cover and dense birch stand on a cut-away peatland

    Energy Technology Data Exchange (ETDEWEB)

    Huotari, N.

    2012-07-01

    Mechanical harvesting of peat changes the original mire ecosystem completely, and without active measures these areas may remain non-vegetated even for decades. Afforestation is one of the most popular after-use options for cut-away peatlands in Finland since it has both economic and aesthetic values. Recycling of wood-ash as a fertilizer has been studied extensively in peatlands drained for forestry. Wood-ash is reported to promote tree growth in these areas without any significant negative impact to the environment and could, therefore, be a suitable option also on cut-away peatlands. However, the environmental effects of ash-fertilization on cut-away areas and on ground vegetation are not fully understood. The impact of wood- and peat-ash application on the early establishment of ground vegetation and downy birch (Betula pubescens) seedlings and on post-fertilization element concentrations in plants and peat substrate were studied in a cut-away peatland. Six treatments of wood-ash, peat-ash, biotite or Forest PK-fertilizer were replicated in three blocks in different mixtures and quantities corresponding to 50 kg ha-1 of phosphorus. All the fertilizers accelerated the revegetation of the bare peat surface significantly, whereas the establishment of plants in the unfertilized area was non-existent even several years after the peat harvesting had ceased. The most striking difference between the wood- and peat-ash-fertilizers and the commercial Forest PK-fertilizer was the extensive coverage of fire-loving moss species in all the areas where ash was spread. Wood- and peat-ash application also accelerated the germination and early establishment of downy birch seedlings more efficiently than the PK-fertilizer. Ground vegetation proved to be highly important in increasing the early biomass production and carbon sequestration on ash-fertilized cut-away peatland. In addition, the below-ground biomass was equal to the above-ground biomass, or even greater. Both wood- and

  19. Synthesis and fungicidal activity of N-thiazol-4-yl-salicylamides, a new family of anti-oomycete compounds.

    Science.gov (United States)

    Sulzer-Mosse, Sarah; Cederbaum, Fredrik; Lamberth, Clemens; Berthon, Guillaume; Umarye, Jayant; Grasso, Valeria; Schlereth, Alexandra; Blum, Mathias; Waldmeier, Rita

    2015-05-01

    A novel class of experimental fungicides has been discovered, which consists of special N-thiazol-4-yl-salicylamides. They originated from amide reversion of lead structures from the patent literature and are highly active against important phytopathogens, such as Phytophthora infestans (potato and tomato late blight), Plasmopara viticola (grapevine downy mildew) and Pythium ultimum (damping-off disease). Structure-activity relationship studies revealed the importance of a phenolic or enolic hydroxy function in the β-position of a carboxamide. An efficient synthesis route has been worked out, which for the first time employs the carbonyldiimidazole-mediated Lossen rearrangement in the field of thiazole carboxylic acids. Copyright © 2015 Elsevier Ltd. All rights reserved.

  20. Chitosan and Laminarin as Alternatives to Copper for Plasmopara viticola Control: Effect on Grape Amino Acid.

    Science.gov (United States)

    Garde-Cerdán, T; Mancini, V; Carrasco-Quiroz, M; Servili, A; Gutiérrez-Gamboa, G; Foglia, R; Pérez-Álvarez, E P; Romanazzi, G

    2017-08-30

    Copper fungicide use is limited by the European regulation; therefore, new strategies have been developed to prevent grapevine downy mildew (GDM). However, there is poor information about their effects on grape amino acid composition. This field trial aimed to evaluate the effect on grape amino acid composition of chitosan and of a mixture of laminarin and Saccharomyces extracts (LamE), applied in different strategies with copper hydroxide. The results showed that all the treatments applied to grapevines decreased the concentration of several amino acids. Moreover, treatments that have mostly decreased these compounds are those with copper hydroxide, especially when applied individually. LamE applied individually or alternately with copper hydroxide had the least negative effect on grape amino acid content. These results provide further information about the negative effects of copper on grape quality, which can be reduced when it is used in strategy with LamE or chitosan in GDM control.

  1. Peptidoglycan from Fermentation By-Product Triggers Defense Responses in Grapevine

    Science.gov (United States)

    Chen, Yang; Takeda, Taito; Aoki, Yoshinao; Fujita, Keiko; Suzuki, Shunji; Igarashi, Daisuke

    2014-01-01

    Plants are constantly under attack from a variety of microorganisms, and rely on a series of complex detection and response systems to protect themselves from infection. Here, we found that a by-product of glutamate fermentation triggered defense responses in grapevine, increasing the expression of defense response genes in cultured cells, foliar chitinase activity, and resistance to infection by downy mildew in leaf explants. To identify the molecule that triggered this innate immunity, we fractionated and purified candidates extracted from Corynebacterium glutamicum, a bacterium used in the production of amino acids by fermentation. Using hydrolysis by lysozyme, a silkworm larva plasma detection system, and gel filtration analysis, we identified peptidoglycan as inducing the defense responses. Peptidoglycans of Escherichia coli, Bacillus subtilis, and Staphylococcus aureus also generated similar defensive responses. PMID:25427192

  2. Rock slopes and reservoirs - lessons learned

    International Nuclear Information System (INIS)

    Moore, D.P.

    1999-01-01

    Lessons learned about slope stability in the course of four decades of monitoring, and in some cases stabilizing, slopes along British Columbia's hydroelectric reservoirs are discussed. The lessons are illustrated by short case histories of some of the more important slopes such as Little Chief Slide, Dutchman's Ridge, Downie Slide, Checkerboard Creek and Wahleach. Information derived from the monitoring and other investigations are compared with early interpretations of geology and slope performance. The comparison serves as an indicator of progress in slope stability determination and as a measure of the value of accumulated experience in terms of the potential consequences to safety and cost savings over the long life-span of hydroelectric projects.14 refs., 2 tabs., 15 figs

  3. Gender Analysis of Risk in Innovation System

    DEFF Research Database (Denmark)

    Ayinde, Ope; Muchie, Mammo; Abaniyan, E. O.

    2011-01-01

    the new maize variety. The analytical tools used include descriptive statistics, regression model; risk utility functions and risk parameter analysis. The result showed that invasion by animals, disease and pest, lack of access to credit wind and price fluctuation were the major risk facing the maize......This study analyzed risk by gender in innovation in Kwara state, Nigeria, using downy mildew resistant maize production as case study. The study employed primary and secondary data. The primary data were collected from well-structured questionnaires administered to both male and female producing...... producers in the area in the usage of the new innovation. The study also revealed that male producers were willing to take risk in the new maize variety production than the female, while the females were more indifferent to the risk involved in the new maize production variety than males. None...

  4. Compte rendu de la 18e Conférence Internationale sur le Tournesol : Mar del Plata & Balcarce (Argentine, 2012

    Directory of Open Access Journals (Sweden)

    Pilorgé Étienne

    2012-11-01

    Full Text Available The 18th International Sunflower Conference took place in Mar del Plata, Argentina, in February, 2012. The key-points and evolutions of sunflower research were presented, in the fields of agronomy, physiology, genetics and genomics, crop protection, quality and markets. Major evolutions can be observed concerning the sequencing of sunflower genome, announced to be complete by the end of 2012, but also concerning the use of models and the progress in the studies on the interactions between varieties genetic pattern, environment and crop management practices. In crop protection aspects, the evolutions of the major pathogens, downy mildew and Orobanche cumana, have been discussed, as well as the breeding efforts for genetic resistances, or the advances concerning the herbicides tolerant varieties. Evolutions in oil quality aspects have been exposed too, such as varieties enriched in stearic acid, or tocopherols, or with low contents in saturated fatty acids.

  5. Discovery of a new Kittlitz's murrelet nest: Clues to habitat selection and nest-site fidelity

    Science.gov (United States)

    Piatt, John F.; Naslund, Nancy L.; van Pelt, Thomas I.

    1999-01-01

    On 13 June 1993, a new Kittlitz's murrelet (Brachyramphus brevirostris) nest was discovered near Red Mountain on the Kenai Peninsula, Alaska. The nest was on a 22° slope at about 900 m elevation with a northeast aspect, and contained a 60.2 × 40.6 mm egg that weighed 49.0 g. Downy feathers and weathered fecal material found at the nest indicated re-use from a previous year, suggesting possible nest site fidelity. The nest was located in an area scoured by winds and free of snow during early spring, suggesting that this may be an important mesoscale factor influencing selection of nesting habitat. Proximity to suitable foraging habitat, particularly sheltered bays and glacial river outflows, may affect breeding habitat choice over larger spatial scales.

  6. Spatial and temporal variation in lead and cadmium in the Laughing Gull, Larus atricilla

    Energy Technology Data Exchange (ETDEWEB)

    Reid, M; Hacker, C S

    1982-11-01

    Lead and cadmium concentrations were measured in eggs and in bone, kidney, liver and stomach contents of downy young, prefledgling, and adult Laughing Gulls collected from Matagorda Bay and Galveston Bay, Texas. Matagorda Bay drains a rural, moderately industrialized region while the Galveston Bay area is heavily urbanized and industrialized. Lead levels were lower in birds from Matagorda Bay and decreased in birds from Galveston Bay between 1977 and 1980. Cadmium levels were also lower in birds from Matagorda Bay but increased over the three-year period in those from Galveston Bay. The temporal decrease in lead may be associated with such environmental control efforts as reduced point source emissions and substitution of unleaded gasoline.

  7. DINÂMICA DE INÓCULOS E DOENÇAS EM VIDEIRA SOB SISTEMA CONVENCIONAL E PROTEGIDO

    Directory of Open Access Journals (Sweden)

    DIÓGENES DA CRUZ BATISTA

    2015-01-01

    Full Text Available The effect of the covered and conventional cultivation of grapevine (cv. Superior Seedless on the aerial dispersion of pathogen inoculum and dynamic of diseases was investigated in two-year (2009 and 2010 and period similar to the year. The experiment was conducted at the experimental station of Embrapa semiarid. The traps were maintained at 0.5 meters above the canopy of the grapevine, and the samples taken every 24 hours with the exchange of slides 9:00 a.m. Greater dispersion of pathogens (Plasmopara viticola, Phakopsora euvitis, Alternaria alternata and intensity of diseases (downy mildew, rust, and bacterial canker were detected in grapevines under conventional cultivation. The aerial dispersal of the fungus Lasiodiplodia theobromae was similar under grapevine covered and uncovered.

  8. Connection of Gnomonia intermedia to Discula betulina and its relationship to other taxa in Gnomoniaceae.

    Science.gov (United States)

    Green, Sarah; Castlebury, Lisa A

    2007-01-01

    Discula betulina is a foliar pathogen on birch (Betula) and Gnomonia intermedia is found on overwintered birch leaves. Perithecia of G. intermedia developed in vitro on colonies of D. betulina isolated from birch tissues in late summer, and single ascospores of G. intermedia consistently developed into colonies similar to D. betulina, producing typical D. betulina conidia. Isolates of D. betulina could be grouped into two mating types, which produced fertile perithecia of G. intermedia when mated with each other. Mycelia from single-ascospore and single-conidial isolates were inoculated onto shoots of downy birch, causing lesions and die-back from which D. betulina was consistently isolated. ITS region ribosomal DNA sequence analysis confirmed the results of the morphological and mating studies, and found that the closest known relatives of G. intermedia/D. betulina are Gnomoniella nana and Sirococcus clavigignenti-juglandacearum. The conclusion from these studies is that D. betulina is the anamorph of G. intermedia.

  9. Validation and global uncertainty of a liquid chromatographic with diode array detection method for the screening of azoxystrobin, kresoxim-methyl, trifloxystrobin, famoxadone, pyraclostrobin and fenamidone in grapes and wine.

    Science.gov (United States)

    de Melo Abreu, Susana; Caboni, Pierluigi; Cabras, Paolo; Garau, Vincenzo Luigi; Alves, Arminda

    2006-07-28

    Azoxystrobin, kresoxim-methyl, trifloxystrobin, pyraclostrobin, famoxadone and fenamidone are permitted Q(o) Inhibitor (Q(o)I) fungicides applied to vine in some European countries for the treatment of downy and powdery mildews. In this work, a method is validated for the analysis of these fungicides in grapes and wine. This screening method consists in a simple one step liquid-liquid extraction followed by liquid chromatography (LC) fitted with a diode array detector (DAD). Limits of detection for grapes and wine were below 0.2 mg kg(-1) or mg l(-1), precision was not above 13%, and recoveries were, on average, 95+/-5% for grapes and 104+/-6% for wine. Global uncertainties evaluated in the concentration range from 0.25 to 2.50 mg l(-1) were below 20%. A confirmatory method by gas chromatography (GC) with mass spectrometry (MS) detection was used.

  10. Identification of host fruit volatiles from domestic apple (Malus domestica), native black hawthorn (Crataegus douglasii) and introduced ornamental hawthorn (C. monogyna) attractive to Rhagoletis pomonella flies from the western United States.

    Science.gov (United States)

    Cha, Dong H; Yee, Wee L; Goughnour, Robert B; Sim, Sheina B; Powell, Thomas H Q; Feder, Jeffrey L; Linn, Charles E

    2012-03-01

    The apple maggot fly, Rhagoletis pomonella, infests apple (Malus domestica) and hawthorn species (most notably the downy hawthorn, Crataegus mollis) in the eastern USA. Evidence suggests that the fly was introduced into the western USA sometime in the last 60 years. In addition to apple, R. pomonella also infests two species of hawthorns in the western USA as major hosts: the native black hawthorn (C. douglasii) and the introduced ornamental English hawthorn, C. monogyna. Apple and downy hawthorn-origin flies in the eastern USA use volatile blends emitted from the surface of their respective ripening fruit to find and discriminate among host trees. To test whether the same is true for western flies, we used coupled gas chromatography and electroantennographic detection (GC-EAD) and developed a 7-component apple fruit blend for western apple-origin flies, an 8-component black hawthorn fruit blend for flies infesting C. douglasii, and a 9-component ornamental hawthorn blend for flies from C. monogyna. Crataegus douglasii and C. monogyna-origin flies showed similar levels of upwind directed flight to their respective natal synthetic fruit blends in flight tunnel assays compared to whole fruit adsorbent extracts, indicating that the blends contain all the behaviorally relevant fruit volatiles to induce maximal response levels. The black and ornamental hawthorn blends shared four compounds in common including 3-methylbutan-1-ol, which appears to be a key volatile for R. pomonella populations in the eastern, southern, and western USA that show a preference for fruit from different Crataegus species. However, the blends also differed from one another and from domesticated apple in several respects that make it possible that western R. pomonella flies behaviorally discriminate among fruit volatiles and form ecologically differentiated host races, as is the case for eastern apple and hawthorn flies.

  11. Breeding approaches in simultaneous selection for multiple stress tolerance of maize in tropical environments

    Directory of Open Access Journals (Sweden)

    Denić M.

    2007-01-01

    Full Text Available Maize is the principal crop and major staple food in the most countries of Sub-Saharan Africa. However, due to the influence of abiotic and biotic stress factors, maize production faces serious constraints. Among the agro-ecological conditions, the main constraints are: lack and poor distribution of rainfall; low soil fertility; diseases (maize streak virus, downy mildew, leaf blights, rusts, gray leaf spot, stem/cob rots and pests (borers and storage pests. Among the socio-economic production constraints are: poor economy, serious shortage of trained manpower; insufficient management expertise, lack of use of improved varieties and poor cultivation practices. To develop desirable varieties, and thus consequently alleviate some of these constraints, appropriate breeding approaches and field-based methodologies in selection for multiple stress tolerance, were implemented. These approaches are mainly based on: a Crossing selected genotypes with more desirable stress tolerant and other agronomic traits; b Using the disease/pest spreader row method, combined with testing and selection of created progenies under strong to intermediate pressure of drought and low soil fertility in nurseries; and c Evaluation of the varieties developed in multi-location trials under low and "normal" inputs. These approaches provide testing and selection of large number of progenies, which is required for simultaneous selection for multiple stress tolerance. Data obtained revealed that remarkable improvement of the traits under selection was achieved. Biggest progress was obtained in selection for maize streak virus and downy mildew resistance, flintiness and earliness. In the case of drought stress, statistical analyses revealed significant negative correlation between yield and anthesis-silking interval, and between yield and days to silk, but positive correlation between yield and grain weight per ear.

  12. Polyethylene mulch modifies greenhouse microclimate and reduces infection of phytophthora infestans in tomato and Pseudoperonospora cubensis in cucumber.

    Science.gov (United States)

    Shtienberg, D; Elad, Y; Bornstein, M; Ziv, G; Grava, A; Cohen, S

    2010-01-01

    The individual and joint effects of covering the soil with polyethylene mulch before planting and fungicides commonly used by organic growers on tomato late blight (caused by Phytophthora infestans) were studied in three experiments conducted from 2002 to 2005. Application of fungicides resulted in inconsistent and insufficient late blight suppression (control efficacy +/- standard error of 34.5 +/- 14.3%) but the polyethylene mulch resulted in consistent, effective, and highly significant suppression (control efficacy of 83.6 +/- 5.5%) of the disease. The combined effect of the two measures was additive. In a second set of three experiments carried out between 2004 and 2006, it was found that the type of polyethylene mulch used (bicolor aluminized, clear, or black) did not affect the efficacy of late blight suppression (control efficacy of 60.1 to 95.8%) and the differences in the effects among the different polyethylene mulches used were insignificant. Next, the ability of the mulch to suppress cucumber downy mildew (caused by Pseudoperonospora cubensis) was studied in four experiments carried out between 2006 and 2008. The mulch effectively suppressed cucumber downy mildew but the effect was less substantial (control efficacy of 34.9 +/- 4.8%) than that achieved for tomato late blight. The disease-suppressing effect of mulch appeared to come from a reduction in leaf wetness duration, because mulching led to reductions in both the frequency of nights when dew formed and the number of dew hours per night when it formed. Mulching also reduced relative humidity in the canopy, which may have reduced sporulation.

  13. GENETIC DIVERSITY OF INTERSPECIFIC HYBRIDS OF THE GENUS ALLIUM L.

    Directory of Open Access Journals (Sweden)

    V. S. Romanov

    2018-01-01

    Full Text Available Selection based on interspecific hybridization of fundamentally new plant forms with a unique combination of genetic material allows expanding the scope of genotypic and phenotypic variability. In this work the comparative analysis of plants of interspecific hybrids of genus Allium L. from various inbred descendants of combinations of crossing of species A. cepa х A. vavilovii and A. cepa х A. fistulosum on selection traits is carried out.Forms were identified: by mass of the bulb more than 100 g; with contrasting coloration of dry cover scales bulbs; by the index of the shape of the bulb; on the resistance to peronosporosis of plants of the first year of vegetation and seed plants; by the number of arrows; height of the arrow; on seed production with a sufficiently high percentage of fertile plants. Plants of interspecific hybrids of onions formed bulbs weighing from 20 to 120 g, with white, golden-yellow, dark golden-yellow, brownish and dark purple color of dry covering scales of a bulb. Plants of interspecific hybrids of onions were flat and round-flat shape of the bulb with the frequency of symptoms ranging from 6.9 to 93.3% and from 11.7 to 93.3%. In a phytopathological evaluation of interspecific hybrids of onions the first year of vegetation identified plants with resistance to downy mildew is from 0 to 4.0 points. Was studied the frequency of occurrence of plants in the progenies weight, colour, bulb type, number, height of the seedstalk, seed productivity and resistance to downy mildew. The increase of genetic diversity in onion plants obtained on the basis of interspecific hybridization, backcrossing and inbreeding is shown.

  14. Interspecific variation in resistance of Asian, European, and North American birches (Betula spp.) to bronze birch borer (Coleoptera: Buprestidae).

    Science.gov (United States)

    Nielsen, David G; Muilenburg, Vanessa L; Herms, Daniel A

    2011-06-01

    Bronze birch borer (Agrilus anxius Gory) is the key pest of birches (Betula spp.) in North America, several of which have been recommended for ornamental landscapes based on anecdotal reports of borer resistance that had not been confirmed experimentally. In a 20-yr common garden experiment initiated in 1979 in Ohio, North American birch species, including paper birch (Betula papyrifera Marshall), 'Whitespire' gray birch (Betula populifolia Marshall), and river birch (Betula nigra L.), were much more resistant to bronze birch borer than species indigenous to Europe and Asia, including European white birch (Betula pendula Roth), downy birch (Betula pubescens Ehrh.), monarch birch (Betula maximowicziana Regel), and Szechuan white birch (Betula szechuanica Jansson). Within 8 yr of planting, every European white, downy, and Szechuan birch had been colonized and killed, although 100% of monarch birch had been colonized and 88% of these plants were killed after nine years. Conversely, 97% of river birch, 76% of paper birch, and 73% Whitespire gray birch were alive 20 yr after planting, and river birch showed no evidence of colonization. This pattern is consistent with biogeographic theory of plant defense: North American birch species that share a coevolutionary history with bronze birch borer were much more resistant than naïve hosts endemic to Europe and Asia, possibly by virtue of evolution of targeted defenses. This information suggests that if bronze birch borer were introduced to Europe or Asia, it could threaten its hosts there on a continental scale. This study also exposed limitations of anecdotal observation as evidence of host plant resistance.

  15. Phytoremediation of disturbed lands in Polar Regions of Russia

    Science.gov (United States)

    Shamsutdinova, Evgeniya

    2017-04-01

    In the Northern regions the problem of restoration of disturbed lands as a result of anthropogenic activities is particularly acut. A large role for the success of native plants to take hold and re-establish themselves is to allow the natural process to work without human intervention. However observation shows that low reserves of available moisture, poor soil nutrients, exposure to wind and water erosion make impossible of a complete restoration of lands due to natural revegetation. One of the methods used to minimize the effect of these factors is the phytoremediation. Research on the Pelyatinskom gas condensate field in the Taimyr Dolgano-Nenets municipal district revealed the efficacy of biological remediation of awnless brome, wildrye siberian, red fescue and kentucky bluegrass. Geobotanical studies of the tailings fields in Yakutia showed that for the phytoremediation of tailings of alluvial deposits of diamonds slough grass can be successfully used, and on the dumps of coal deposits with a high degree of survival of the willow, poplar, larch, alder stand and pine. Development of technology for remediation of placer gold deposits of the Komsomol mine and Bilibino in Chukotka has shown the effectiveness of sowing common oat, wildrye and larch. The study of the experience of recultivation on objects of the "Transneft-Baltic" in the North-Western Federal district allowed us to select as the recommended mixtures of species: meadow fescue, cocksfoot, timothy grass, white and alsike clover and alfalfa. The multicomponent mixture of red fescue, awnless brome, meadow fescue, timothy grass, couch grass, kentucky bluegrass, beckman's grass were successfully used at the mine of the Bovanenkovo oil and gas condensate field. On the technological grounds of the complex pumping station in the Yamalo-Nenets Autonomous area willows were planted. Pine and willow trees were planted on quarry workings in the Northern taiga of Western Siberia land .Planting of pines has shown

  16. Monitoring and research at Walnut Creek National Wildlife Refuge

    Science.gov (United States)

    Roelle, James E.; Hamilton, David B.

    1993-01-01

    Walnut Creek National Wildlife Refuge-Prairie Learning Center (Walnut Creek or the Refuge) is one of the newest additions to the National Wildlife Refuge System, which consists of over 480 units throughout the United States operated by the U.S. Department of the Interior, Fish and Wildlife Service (the Service). Located about 20 miles east of Des Moines, Iowa, the Refuge has an approved acquisition boundary containing 8,654 acres (Figure 1). Acquisition is from willing sellers only, and to date the Service has purchased approximately 5,000 acres. The acquisition boundary encompasses about 43% of the watershed of Walnut Creek, which bisects the Refuge and drains into the Des Moines River to the southeast. Approximately 25%-30% of the Walnut Creek watershed is downstream of the Refuge. As authorized by Congress in 1990, the purposes of the Refuge are to (U.S. Fish and Wildlife Service 1992): • restore native tallgrass pairie, wetland, and woodland habitats for breeding and migratory waterfowl and resident wildlife; • serve as a major environmental education center providing opportunities for study; • provide outdoor recreation benefits to the public; and • provide assistance to local landowners to improve their lands for wildlife habitat. To implement these purposes authorized by Congress, the Refuge has established the goal of recreating as nearly as possible the natural communities that existed at the time of settlement by Euro-Americans (circa 1840). Current land use is largely agricultural, including 69% cropland, 17% grazed pasture, and 7.5% grassland (dominantly brome) enrolled in the Conservation Reserve Program). About 1,395 acres of relict native communities also exist on the Refuge, including prairie (725 acres), oak savanna and woodland (450 acres), and riparian or wetland areas (220 acres). Some of these relicts are highly restorable; others contain only a few prairie plants in a matrix of brome and will be more difficult to restore. When the

  17. Land use history, ecosystem type and species composition drive water use efficiency in annual maize and perennial grasslands in a humid temperate climate

    Science.gov (United States)

    Gelfand, I.; Abraha, M.; Chen, J.; Shao, C.; Su, Y. J.; Hamilton, S. K.; Robertson, G. P.

    2015-12-01

    Water use efficiency (WUE), carbon gained per unit water lost, is a fundamental plant and ecosystem function that regulates plant productivity, global hydrology and carbon cycles. We examined ecosystem (E) and intrinsic (i) WUEs derived from eddy covariance (EC) measurements and plant carbon isotope discrimination, respectively, to study how WUE is affected by land-use history, ecosystem type, and plants community composition. We measured EWUE and iWUE of three perennial grasslands planted to mixed-prairie, switchgrass and brome grass as compared to a fields planted to corn. Each of studied ecosystems was replicated on two fields with contrasting land-use histories: one field was managed under the USDA Conservation Reserve Program (CRP, planted to bromgrass) and another was in conventional agriculture (AGR) corn/soybean rotation for few decades before start of the experiment. In 2009, all but one CRP field were converted to no-till soybean. In 2010, the converted CRP and AGR fields were planted to mixed-prairie (C3 and C4 grasses), switchgrass (C4 grass), and no-till corn (C4 grass). During 2009-2013, we measured carbon and water exchange over each field using an EC technique and sampled plant tissue for 13C isotopes analysis. Land-use history, ecosystem type, and species composition had large effects on EWUEs. Intrinsic WUE of individual C3 grass species, however, was similar across the study period, despite drought in 2012. Corn and brome grass had the highest and lowest overall mean EWUE, 4.1 and 2.2 g C kg-1 H2O, respectively. Restored prairie on former AGR land had a mean EWUE of 3.0 g C kg-1 H2O, significantly greater than on former CRP land with a EWUE of 2.5 g C kg-1 H2O. Land use history had no effect on interannual variability of EWUE of corn. Prairie and switchgrass established on former CRP land exhibited no change of EWUE, as well. Same ecosystems established on former AGR land, oppositely, increased their WUEs over the study period from ~ 2.5 g C kg-1

  18. Ação de quitosana sobre o desenvolvimento de Plasmopara viticola e Elsinoe ampelina, in vitro e em videiras cv. Isabel Chitosan action on Plasmopara viticola and Elsinoe ampelina development in vitro and in grapevines cv. Isabel

    Directory of Open Access Journals (Sweden)

    Aline José Maia

    2010-09-01

    Full Text Available Este trabalho teve como objetivos avaliar o efeito da quitosana no controle dos fungos Plasmopara viticola e Elsinoe ampelina, agentes causais do míldio e da antracnose da videira, respectivamente. As concentrações de 0, 20, 40, 80 e 160 mg L-1 de quitosana foram utilizadas nos seguintes experimentos: testes de crescimento micelial, de germinação de esporos e ensaio em condições de campo. Para os dois últimos ensaios, adicionou-se tratamentos padrões com mancozeb e calda bordalesa. Verificou-se redução no crescimento micelial de E. ampelina sendo que a maior concentração de quitosana (160 mg L-1 reduziu em 57% o desenvolvimento do fungo, 192 horas após incubação. Nos testes de germinação, a dose de 160 mg L-1 de quitosana reduziu a germinação de esporos de E. ampelina em aproximadamente 98% e de P. viticola em 60%, não diferindo dos tratamentos com calda bordalesa e mancozeb. Nos ensaios a campo as maiores doses de quitosana (80 e 160 mg L-1 apresentaram um decréscimo na severidade de antracnose entre 93 e 81%. Para o míldio, a concentração de 160 mg L-1 apresentou um decréscimo de aproximadamente 81%. Baseando-se nestes resultados, pode-se concluir que a quitosana tem um grande potencial no controle do míldio e da antracnose da videira.This work aimed to evaluate the effect of chitosan on the control of fungi Elsinoe ampelina and Plasmopara viticola, the causal agents of downy mildew and anthracnose in grapevines, respectively. The concentrations of 0, 20, 40, 80 and 160 mg L-1 chitosan were used in the following trials: mycelial growth, spore germination, and experiment in field conditions. For the last two trials standard treatments with mancozeb and bordeax mixture were added. There was a reduction in E. ampelina mycelial growth and the highest chitosan concentration (160 mg L-1 decreased by 57% the fungus development at 192 hours after incubation. In the germination tests, the concentration of 160 mg L-1 chitosan

  19. Rumen volatile fatty acids and milk composition from cows fed hay, haylage, or urea-treated corn silage.

    Science.gov (United States)

    Schingoethe, D J; Voelker, H H; Beardsley, G L; Parsons, J G

    1976-05-01

    Alfalfa-brome hay, haylage, .5% urea-treated corn silage, or .5% urea plus 1% dried whey-treated corn silage was fed as the only forage to one of four groups of 10 lactating cows per group for a lactation trial of 10 wk. Rumen samples were collected via stomach tube 3 to 4 h after the morning feeding. The pH of the rumen samples from cows fed hay was higher than for cows fed haylage, urea-treated corn silage, and urea-whey corn silage, 6.69 versus 6.36, 6.40, and 6.50. Total volatile fatty acids and propionate were highest from cows fed urea-whey corn silage and were higher on all three fermented forages than cows fed hay. Acetate/propionate ratio was highest from cows fed hay and lowest from cows fed corn silages. Butyrate was highest from cows fed haylage or hay. Milk protein composition was not affected by ration although nonprotein nitrogen of milk was highest from cows fed the urea-treated corn silages. Oleic acid and total unsaturated fatty acids were lowest in milk fat from cows fed hay while palmitic acid was highest from cows fed hay and haylage. These results suggest that type of forage fed may cause small changes in rumen fermentation and in milk composition. The importance of these changes is unknown but may affect properties of dairy products produced from this milk.

  20. A Foxtail mosaic virus Vector for Virus-Induced Gene Silencing in Maize.

    Science.gov (United States)

    Mei, Yu; Zhang, Chunquan; Kernodle, Bliss M; Hill, John H; Whitham, Steven A

    2016-06-01

    Plant viruses have been widely used as vectors for foreign gene expression and virus-induced gene silencing (VIGS). A limited number of viruses have been developed into viral vectors for the purposes of gene expression or VIGS in monocotyledonous plants, and among these, the tripartite viruses Brome mosaic virus and Cucumber mosaic virus have been shown to induce VIGS in maize (Zea mays). We describe here a new DNA-based VIGS system derived from Foxtail mosaic virus (FoMV), a monopartite virus that is able to establish systemic infection and silencing of endogenous maize genes homologous to gene fragments inserted into the FoMV genome. To demonstrate VIGS applications of this FoMV vector system, four genes, phytoene desaturase (functions in carotenoid biosynthesis), lesion mimic22 (encodes a key enzyme of the porphyrin pathway), iojap (functions in plastid development), and brown midrib3 (caffeic acid O-methyltransferase), were silenced and characterized in the sweet corn line Golden × Bantam. Furthermore, we demonstrate that the FoMV infectious clone establishes systemic infection in maize inbred lines, sorghum (Sorghum bicolor), and green foxtail (Setaria viridis), indicating the potential wide applications of this viral vector system for functional genomics studies in maize and other monocots. © 2016 American Society of Plant Biologists. All Rights Reserved.

  1. Systemic virus-induced gene silencing allows functional characterization of maize genes during biotrophic interaction with Ustilago maydis.

    Science.gov (United States)

    van der Linde, Karina; Kastner, Christine; Kumlehn, Jochen; Kahmann, Regine; Doehlemann, Gunther

    2011-01-01

    Infection of maize (Zea mays) plants with the corn smut fungus Ustilago maydis leads to the formation of large tumors on the stem, leaves and inflorescences. In this biotrophic interaction, plant defense responses are actively suppressed by the pathogen, and previous transcriptome analyses of infected maize plants showed massive and stage-specific changes in host gene expression during disease progression. To identify maize genes that are functionally involved in the interaction with U. maydis, we adapted a virus-induced gene silencing (VIGS) system based on the brome mosaic virus (BMV) for maize. Conditions were established that allowed successful U. maydis infection of BMV-preinfected maize plants. This set-up enabled quantification of VIGS and its impact on U. maydis infection using a quantitative real-time PCR (qRT-PCR)-based readout. In proof-of-principle experiments, an U. maydis-induced terpene synthase was shown to negatively regulate disease development while a protein involved in cell death inhibition was required for full virulence of U. maydis. The results suggest that this system is a versatile tool for the rapid identification of maize genes that determine compatibility with U. maydis. © (2010) Max Planck Society. Journal compilation © New Phytologist Trust (2010).

  2. A Foxtail mosaic virus Vector for Virus-Induced Gene Silencing in Maize1[OPEN

    Science.gov (United States)

    Mei, Yu; Kernodle, Bliss M.; Hill, John H.

    2016-01-01

    Plant viruses have been widely used as vectors for foreign gene expression and virus-induced gene silencing (VIGS). A limited number of viruses have been developed into viral vectors for the purposes of gene expression or VIGS in monocotyledonous plants, and among these, the tripartite viruses Brome mosaic virus and Cucumber mosaic virus have been shown to induce VIGS in maize (Zea mays). We describe here a new DNA-based VIGS system derived from Foxtail mosaic virus (FoMV), a monopartite virus that is able to establish systemic infection and silencing of endogenous maize genes homologous to gene fragments inserted into the FoMV genome. To demonstrate VIGS applications of this FoMV vector system, four genes, phytoene desaturase (functions in carotenoid biosynthesis), lesion mimic22 (encodes a key enzyme of the porphyrin pathway), iojap (functions in plastid development), and brown midrib3 (caffeic acid O-methyltransferase), were silenced and characterized in the sweet corn line Golden × Bantam. Furthermore, we demonstrate that the FoMV infectious clone establishes systemic infection in maize inbred lines, sorghum (Sorghum bicolor), and green foxtail (Setaria viridis), indicating the potential wide applications of this viral vector system for functional genomics studies in maize and other monocots. PMID:27208311

  3. Top 10 plant viruses in molecular plant pathology.

    Science.gov (United States)

    Scholthof, Karen-Beth G; Adkins, Scott; Czosnek, Henryk; Palukaitis, Peter; Jacquot, Emmanuel; Hohn, Thomas; Hohn, Barbara; Saunders, Keith; Candresse, Thierry; Ahlquist, Paul; Hemenway, Cynthia; Foster, Gary D

    2011-12-01

    Many scientists, if not all, feel that their particular plant virus should appear in any list of the most important plant viruses. However, to our knowledge, no such list exists. The aim of this review was to survey all plant virologists with an association with Molecular Plant Pathology and ask them to nominate which plant viruses they would place in a 'Top 10' based on scientific/economic importance. The survey generated more than 250 votes from the international community, and allowed the generation of a Top 10 plant virus list for Molecular Plant Pathology. The Top 10 list includes, in rank order, (1) Tobacco mosaic virus, (2) Tomato spotted wilt virus, (3) Tomato yellow leaf curl virus, (4) Cucumber mosaic virus, (5) Potato virus Y, (6) Cauliflower mosaic virus, (7) African cassava mosaic virus, (8) Plum pox virus, (9) Brome mosaic virus and (10) Potato virus X, with honourable mentions for viruses just missing out on the Top 10, including Citrus tristeza virus, Barley yellow dwarf virus, Potato leafroll virus and Tomato bushy stunt virus. This review article presents a short review on each virus of the Top 10 list and its importance, with the intent of initiating discussion and debate amongst the plant virology community, as well as laying down a benchmark, as it will be interesting to see in future years how perceptions change and which viruses enter and leave the Top 10. © 2011 The Authors. Molecular Plant Pathology © 2011 BSPP and Blackwell Publishing Ltd.

  4. In Search of the English Sabbat: Popular Conceptions of Witches’ Meetings in Early Modern England

    Directory of Open Access Journals (Sweden)

    James Sharpe

    2013-03-01

    Full Text Available This article explores the evidence for belief in the witches’ sabbat in early modern England. England is generally thought of as a country where the concept of the sabbat did not exist, and it was certainly largely absent from elite thinking on witchcraft, as displayed in the witchcraft statutes of 1563 and 1604 and Elizabethan and Jacobean demonological writings. But evidence entering the historical record mainly via deposi- tions taken by justices of the peace suggests that there was a widespread popular belief in the sabbat or in parallel forms of witches’ meetings, evidence that the concept of the sabbat existed in popular culture. In this, the English evidence seems to support Carlo Ginzburg’s model of the sabbat being essentially a popular construction in its origins. The article also examines a play based on one of the historical incidents analysed, Richard Brome and Thomas Heywood’s The Late Lancashire Witches (1634, and uses it as a starting point for a brief discussion of witchcraft motifs in contemporary drama, notably Shakespeare’s Macbeth.

  5. Forage seeding in rangelands increases production and prevents weed invasion

    Directory of Open Access Journals (Sweden)

    Josh Davy

    2017-07-01

    Full Text Available Increasing forage productivity in the Sierra foothill rangelands would help sustain the livestock industry as land availability shrinks and lease rates rise, but hardly any studies have been done on forage selections. From 2009 to 2014, in one of the first long-term and replicated studies of seeding Northern California's Mediterranean annual rangeland, we compared the cover of 22 diverse forages to determine their establishment and survivability over time. Among the annual herbs, forage brassica (Brassica napus L. and chicory (Cichorium intybus L. proved viable options. Among the annual grasses, soft brome (Bromus hordeaceus and annual ryegrass (Lolium multiflorum performed well. However, these species will likely require frequent reseeding to maintain dominance. Long-term goals of sustained dominant cover (> 3 years are best achieved with perennial grasses. Perennial grasses that persisted with greater than 50% cover were Berber orchardgrass (Dactylis glomerata, Flecha tall fescue (Lolium arundinaceum and several varieties of hardinggrass (Phalaris aquatica L., Perla koleagrass, Holdfast, Advanced AT. In 2014, these successful perennials produced over three times more dry matter (pounds per acre than the unseeded control and also suppressed annual grasses and yellow starthistle (Centaurea solstitialis L. cover.

  6. The induction of chromosomal aberrations by X irradiation during S-phase in cultured diploid Syrian hamster fibroblasts

    International Nuclear Information System (INIS)

    Savage, J.R.K.; Bhunya, S.P.

    1980-01-01

    The induction of chromosomal aberrations by 4.0 Gy of 250 kV X-rays in cell throughout S-phase has been investigated in untransformed diploid Syrian hamster fibroblasts. Using a method of subdividing S into catologically defined stages (on the basis of replication band patterns displayed after brome-deoxyuridine incorporation) it is shown that: (1) This dose does not perturb, measurable, the intracellular programme of synthesis at the chromosome band level, so that the cell classification criteria remain valid after radiation. (2) Mitotic delay and perturbation appears to be less for cells in very early S, but there is no evidence of a massive cell mixing of S cells. (3) S-phase is, in general, much less sensitive to aberration induction at all sub-phases than G 2 . (4) Both chromosome and chromatid-type aberrations are found in pre- S and S cells, but chromatid-types predominate in the latter at all sub-phases. (5) The frequency of chromatid-types, especially interchanges falls in eraly. (orig.)

  7. Spectral and holographic characterization of new photochromic compounds based on substituted spiropyrans

    Science.gov (United States)

    Ciapurin, Igor V.; Robu, Stephan V.; Vlad, Lyudmila A.; Lessard, Roger A.; Tork, Amir; Lafond, Christophe; Bolte, Michel

    2001-06-01

    We report a new photochromic composite polymer consisting of poly-N-epoxypropylcarbazole (PEPC) polymeric matrix with a nitro-brome-substituted spiropyran (BNSP) photochromic dye. The PEPC + BNSP films can be considered as negative photochromic recording media. They are colored in the initial state and bleached upon irradiation within the visible spectra. When we placed the bleached samples to the darkness, they slowly revert to the colored form. This process has strong temperature dependence, so one can either 'freeze'' or accelerate changing of the current coloration state in the PEPC + BNSP. The experimental measurements are evaluated in conjunction with its potential applications for optical holographic recording in the visible spectral range. The real-time holographic recording procedure in PEPC + BNSP films was studied. The diffraction efficiency values reached the maximum of 23 percent at spatial frequency of 1600 line pairs per mm, during direct hologram recording with the 532 nm Coherent VERDI laser irradiation. Light exposures were ranged from 70 to 280 mJ/cm2. The investigated compounds have good perspectives for use in holography, two-photon optical data storage, electro-optics, and optical-limiting applications due to coupling of some unique properties such as high optical non-linearity, well charge transport, short response times, no-limiting resolution ability, etc.

  8. Targeted imaging of ovarian cancer cells using viral nanoparticles doped with indocyanine green

    Science.gov (United States)

    Guerrero, Yadir; Bahmani, Baharak; Jung, Bonsu; Vullev, Valentine; Kundra, Vikas; Anvari, Bahman

    2013-03-01

    Our group has constructed a new type of viral nanoparticles (VNPs) from genome-depleted plant infecting brome mosaic virus (BMV) that encapsulates the FDA-approved near infrared (NIR) indocyanine green (ICG)[1]. We refer to these VNPs as optical viral ghosts (OVGs) since the constructs lack the genomic content of wild-type BMV. One of our areas of interest is the application of OVGs for real-time intraoperative NIR fluorescence imaging of small peritoneal ovarian tumor nodules. We target human epidermal growth factor receptor-2 (HER-2) expression in ovarian cancer as a biomarker associated with ovarian cancer, since its over-expression is linked to the disease's progression to death. We functionalize the OVGs with anti-HER-2 monoclonal antibodies using reductive amination methods. We used fluorescence imaging to visualize the SKOV-3 cells (high HER-2 expression) after incubation with free ICG, OVGs, and functionalized OVGs. Our results suggest the possibility of using anti-HER2 conjugated OVGs in conjunction with cytoreductive surgery to detect small tumor nodules (<5cm) which currently are not excised during surgery.

  9. Virus-resembling nano-structures for near infrared fluorescence imaging of ovarian cancer HER2 receptors

    Science.gov (United States)

    Guerrero, Yadir A.; Bahmani, Baharak; Singh, Sheela P.; Vullev, Valentine I.; Kundra, Vikas; Anvari, Bahman

    2015-10-01

    Ovarian cancer remains the dominant cause of death due to malignancies of the female reproductive system. The capability to identify and remove all tumors during intraoperative procedures may ultimately reduce cancer recurrence, and lead to increased patient survival. The objective of this study is to investigate the effectiveness of an optical nano-structured system for targeted near infrared (NIR) imaging of ovarian cancer cells that over-express the human epidermal growth factor receptor 2 (HER2), an important biomarker associated with ovarian cancer. The nano-structured system is comprised of genome-depleted plant-infecting brome mosaic virus doped with NIR chromophore, indocyanine green, and functionalized at the surface by covalent attachment of monoclonal antibodies against the HER2 receptor. We use absorption and fluorescence spectroscopy, and dynamic light scattering to characterize the physical properties of the constructs. Using fluorescence imaging and flow cytometry, we demonstrate the effectiveness of these nano-structures for targeted NIR imaging of HER2 receptors in vitro. These functionalized nano-materials may provide a platform for NIR imaging of ovarian cancer.

  10. Virus-resembling nano-structures for near infrared fluorescence imaging of ovarian cancer HER2 receptors

    International Nuclear Information System (INIS)

    Guerrero, Yadir A; Bahmani, Baharak; Vullev, Valentine I; Anvari, Bahman; Singh, Sheela P; Kundra, Vikas

    2015-01-01

    Ovarian cancer remains the dominant cause of death due to malignancies of the female reproductive system. The capability to identify and remove all tumors during intraoperative procedures may ultimately reduce cancer recurrence, and lead to increased patient survival. The objective of this study is to investigate the effectiveness of an optical nano-structured system for targeted near infrared (NIR) imaging of ovarian cancer cells that over-express the human epidermal growth factor receptor 2 (HER2), an important biomarker associated with ovarian cancer. The nano-structured system is comprised of genome-depleted plant-infecting brome mosaic virus doped with NIR chromophore, indocyanine green, and functionalized at the surface by covalent attachment of monoclonal antibodies against the HER2 receptor. We use absorption and fluorescence spectroscopy, and dynamic light scattering to characterize the physical properties of the constructs. Using fluorescence imaging and flow cytometry, we demonstrate the effectiveness of these nano-structures for targeted NIR imaging of HER2 receptors in vitro. These functionalized nano-materials may provide a platform for NIR imaging of ovarian cancer. (paper)

  11. How viral capsids adapt to mismatched cargoes—identifying mechanisms of morphology control with simulations

    Science.gov (United States)

    Elrad, Oren

    2009-03-01

    During the replication of many viruses, hundreds to thousands of protein subunits assemble around the viral nucleic acid to form a protein shell called a capsid. Most viruses form one particular structure with astonishing fidelity; yet, recent experiments demonstrate that capsids can assemble with different sizes and morphologies to accommodate nucleic acids or other cargoes such as functionalized nanoparticles. In this talk, we will explore the mechanisms of simultaneous assembly and cargo encapsidation with a computational model that describes the assembly of icosahedral capsids around functionalized nanoparticles. With this model, we find parameter values for which subunits faithfully form empty capsids with a single morphology, but adaptively assemble into different icosahedral morphologies around nanoparticles with different diameters. Analyzing trajectories in which adaptation is or is not successful sheds light on the mechanisms by which capsid morphology may be controlled in vitro and in vivo, and suggests experiments to test these mechanisms. We compare the simulation results to recent experiments in which Brome Mosaic Virus capsid proteins assemble around functionalized nanoparticles, and describe how future experiments can test the model predictions.

  12. A theory for viral capsid assembly around electrostatic cores

    Science.gov (United States)

    Hagan, Michael F.

    2009-03-01

    We develop equilibrium and kinetic theories that describe the assembly of viral capsid proteins on a charged central core, as seen in recent experiments in which brome mosaic virus capsids assemble around nanoparticles functionalized with polyelectrolyte. We model interactions between capsid proteins and nanoparticle surfaces as the interaction of polyelectrolyte brushes with opposite charge using the nonlinear Poisson Boltzmann equation. The models predict that there is a threshold density of functionalized charge, above which capsids efficiently assemble around nanoparticles, and that light scatter intensity increases rapidly at early times without the lag phase characteristic of empty capsid assembly. These predictions are consistent with and enable interpretation of preliminary experimental data. However, the models predict a stronger dependence of nanoparticle incorporation efficiency on functionalized charge density than measured in experiments and do not completely capture a logarithmic growth phase seen in experimental light scatter. These discrepancies may suggest the presence of metastable disordered states in the experimental system. In addition to discussing future experiments for nanoparticle-capsid systems, we discuss broader implications for understanding assembly around charged cores such as nucleic acids.

  13. High-resolution 40Ar/39Ar chronology of multiple intrusion igneous complexes

    Science.gov (United States)

    Foland, K. A.; Chen, J.-F.; Linder, J. S.; Henderson, C. M. B.; Whillans, I. M.

    1989-06-01

    The Mount Brome complex of the Monteregian province of southern Quebec, Canada, consits of several major intrusions ranging compositionally from gabbro to syenite. The relative ages of these intrusives have been investigated with high-resolution 40Ar/39Ar analyses, including a specially designed irradiation configuration to cancel the effects of fluence gradients. Small yet distinct apparent age differences are observed. While a number of analytical and geological factors could be proposed to explain the small variations, evaluation of these suggests the age differences reflect those in emplacement times. The gabbro and nepheline diorite were emplaced within a short span 123.1 Ma ago. Generally more evolved lithologies (biotite monzodiorite, pulaskite, nordmarkite) appear to have been emplaced within a restricted interval 1.4±0.3 Ma later. Whole-rock Rb-Sr systematics do not give acceptable isochrons because of significant scatter interpreted to reflect initial 87Sr/86Sr heterogeneities resulting from crustal contamination. Considering the variations in initial ratio, the Rb-Sr data are consistent with the 40Ar/39Ar age.

  14. An adaptive approach to invasive plant management on U.S. Fish and Wildlife Service-owned native prairies in the Prairie Pothole Region: decision support under uncertainity

    Science.gov (United States)

    Gannon, Jill J.; Moore, Clinton T.; Shaffer, Terry L.; Flanders-Wanner, Bridgette

    2011-01-01

    Much of the native prairie managed by the U.S. Fish and Wildlife Service (Service) in the Prairie Pothole Region (PPR) is extensively invaded by the introduced cool-season grasses smooth brome (Bromus inermis) and Kentucky bluegrass (Poa pratensis). The central challenge to managers is selecting appropriate management actions in the face of biological and environmental uncertainties. We describe the technical components of a USGS management project, and explain how the components integrate and inform each other, how data feedback from individual cooperators serves to reduce uncertainty across the whole region, and how a successful adaptive management project is coordinated and maintained on a large scale. In partnership with the Service, the U.S. Geological Survey is developing an adaptive decision support framework to assist managers in selecting management actions under uncertainty and maximizing learning from management outcomes. The framework is built around practical constraints faced by refuge managers and includes identification of the management objective and strategies, analysis of uncertainty and construction of competing decision models, monitoring, and mechanisms for model feedback and decision selection. Nineteen Service field stations, spanning four states of the PPR, are participating in the project. They share a common management objective, available management strategies, and biological uncertainties. While the scope is broad, the project interfaces with individual land managers who provide refuge-specific information and receive updated decision guidance that incorporates understanding gained from the collective experience of all cooperators.

  15. Sequencing and De Novo Transcriptome Assembly of Brachypodium sylvaticum (Poaceae

    Directory of Open Access Journals (Sweden)

    Samuel E. Fox

    2013-03-01

    Full Text Available Premise of the study: We report the de novo assembly and characterization of the transcriptomes of Brachypodium sylvaticum (slender false-brome accessions from native populations of Spain and Greece, and an invasive population west of Corvallis, Oregon, USA. Methods and Results: More than 350 million sequence reads from the mRNA libraries prepared from three B. sylvaticum genotypes were assembled into 120,091 (Corvallis, 104,950 (Spain, and 177,682 (Greece transcript contigs. In comparison with the B. distachyon Bd21 reference genome and GenBank protein sequences, we estimate >90% exome coverage for B. sylvaticum. The transcripts were assigned Gene Ontology and InterPro annotations. Brachypodium sylvaticum sequence reads aligned against the Bd21 genome revealed 394,654 single-nucleotide polymorphisms (SNPs and >20,000 simple sequence repeat (SSR DNA sites. Conclusions: To our knowledge, this is the first report of transcriptome sequencing of invasive plant species with a closely related sequenced reference genome. The sequences and identified SNP variant and SSR sites will provide tools for developing novel genetic markers for use in genotyping and characterization of invasive behavior of B. sylvaticum.

  16. Syngas Production from Pyrolysis of Nine Composts Obtained from Nonhybrid and Hybrid Perennial Grasses

    Directory of Open Access Journals (Sweden)

    Adéla Hlavsová

    2014-01-01

    Full Text Available A pyrolysis of compost for the production of syngas with an explicit H2/CO = 2 or H2/CO = 3 was investigated in this study. The composts were obtained from nonhybrid (perennial grasses (NHG and hybrid (perennial grasses (HG. Discrepancies in H2 evolution profiles were found between NHG and HG composts. In addition, positive correlations for NHG composts were obtained between (i H2 yield and lignin content, (ii H2 yield and potassium content, and (iii CO yield and cellulose content. All composts resulted in H2/CO = 2 and five of the nine composts resulted in H2/CO = 3. Exceptionally large higher heating values (HHVs of pyrolysis gas, very close to HHVs of feedstock, were obtained for composts made from mountain brome (MB, 16.23 MJ/kg, hybrid Becva (FB, 16.45 MJ/kg, and tall fescue (TF, 17.43 MJ/kg. The MB and FB composts resulted in the highest syngas formation with H2/CO = 2, whereas TF compost resulted in the highest syngas formation with H2/CO = 3.

  17. Host ESCRT proteins are required for bromovirus RNA replication compartment assembly and function.

    Directory of Open Access Journals (Sweden)

    Arturo Diaz

    2015-03-01

    Full Text Available Positive-strand RNA viruses genome replication invariably is associated with vesicles or other rearranged cellular membranes. Brome mosaic virus (BMV RNA replication occurs on perinuclear endoplasmic reticulum (ER membranes in ~70 nm vesicular invaginations (spherules. BMV RNA replication vesicles show multiple parallels with membrane-enveloped, budding retrovirus virions, whose envelopment and release depend on the host ESCRT (endosomal sorting complexes required for transport membrane-remodeling machinery. We now find that deleting components of the ESCRT pathway results in at least two distinct BMV phenotypes. One group of genes regulate RNA replication and the frequency of viral replication complex formation, but had no effect on spherule size, while a second group of genes regulate RNA replication in a way or ways independent of spherule formation. In particular, deleting SNF7 inhibits BMV RNA replication > 25-fold and abolishes detectable BMV spherule formation, even though the BMV RNA replication proteins accumulate and localize normally on perinuclear ER membranes. Moreover, BMV ESCRT recruitment and spherule assembly depend on different sets of protein-protein interactions from those used by multivesicular body vesicles, HIV-1 virion budding, or tomato bushy stunt virus (TBSV spherule formation. These and other data demonstrate that BMV requires cellular ESCRT components for proper formation and function of its vesicular RNA replication compartments. The results highlight growing but diverse interactions of ESCRT factors with many viruses and viral processes, and potential value of the ESCRT pathway as a target for broad-spectrum antiviral resistance.

  18. Introducing cattle grazing to a noxious weed-dominated rangeland shifts plant communities

    Directory of Open Access Journals (Sweden)

    Josh S. Davy

    2015-10-01

    Full Text Available Invasive weed species in California's rangelands can reduce herbaceous diversity, forage quality and wildlife habitat. Small-scale studies (5 acres or fewer have shown reductions of medusahead and yellow starthistle using prescribed grazing on rangelands, but little is published on the effects of pasture-scale (greater than 80 acres prescribed grazing on weed control and plant community responses. We report the results of a 6-year collaborative study of manager-applied prescribed grazing implemented on rangeland that had not been grazed for 4 years. Grazing reduced medusahead but did not alter yellow starthistle cover. Medusahead reductions were only seen in years that did not have significant late spring rainfall, suggesting that it is able to recover from heavy grazing if soil moisture is present. Later season grazing appears to have the potential to suppress medusahead in all years. In practice, however, such grazing is constrained by livestock drinking water availability and forage quality, which were limited even in years with late spring rainfall. Thus, we expect that grazing treatments under real-world constraints would reduce medusahead only in years with little late spring rainfall. After 10 years of grazing exclusion, the ungrazed plant communities began to shift, replacing medusahead with species that have little value, such as ripgut and red brome.

  19. Model estimation of land-use effects on water levels of northern Prairie wetlands

    Science.gov (United States)

    Voldseth, R.A.; Johnson, W.C.; Gilmanov, T.; Guntenspergen, G.R.; Millett, B.V.

    2007-01-01

    Wetlands of the Prairie Pothole Region exist in a matrix of grassland dominated by intensive pastoral and cultivation agriculture. Recent conservation management has emphasized the conversion of cultivated farmland and degraded pastures to intact grassland to improve upland nesting habitat. The consequences of changes in land-use cover that alter watershed processes have not been evaluated relative to their effect on the water budgets and vegetation dynamics of associated wetlands. We simulated the effect of upland agricultural practices on the water budget and vegetation of a semipermanent prairie wetland by modifying a previously published mathematical model (WETSIM). Watershed cover/land-use practices were categorized as unmanaged grassland (native grass, smooth brome), managed grassland (moderately heavily grazed, prescribed burned), cultivated crops (row crop, small grain), and alfalfa hayland. Model simulations showed that differing rates of evapotranspiration and runoff associated with different upland plant-cover categories in the surrounding catchment produced differences in wetland water budgets and linked ecological dynamics. Wetland water levels were highest and vegetation the most dynamic under the managed-grassland simulations, while water levels were the lowest and vegetation the least dynamic under the unmanaged-grassland simulations. The modeling results suggest that unmanaged grassland, often planted for waterfowl nesting, may produce the least favorable wetland conditions for birds, especially in drier regions of the Prairie Pothole Region. These results stand as hypotheses that urgently need to be verified with empirical data.

  20. Examining the Heterogeneous Genome Content of Multipartite Viruses BMV and CCMV by Native Mass Spectrometry

    Science.gov (United States)

    van de Waterbeemd, Michiel; Snijder, Joost; Tsvetkova, Irina B.; Dragnea, Bogdan G.; Cornelissen, Jeroen J.; Heck, Albert J. R.

    2016-06-01

    Since the concept was first introduced by Brian Chait and co-workers in 1991, mass spectrometry of proteins and protein complexes under non-denaturing conditions (native MS) has strongly developed, through parallel advances in instrumentation, sample preparation, and data analysis tools. However, the success rate of native MS analysis, particularly in heterogeneous mega-Dalton (MDa) protein complexes, still strongly depends on careful instrument modification. Here, we further explore these boundaries in native mass spectrometry, analyzing two related endogenous multipartite viruses: the Brome Mosaic Virus (BMV) and the Cowpea Chlorotic Mottle Virus (CCMV). Both CCMV and BMV are approximately 4.6 megadalton (MDa) in mass, of which approximately 1 MDA originates from the genomic content of the virion. Both viruses are produced as mixtures of three particles carrying different segments of the genome, varying by approximately 0.1 MDA in mass (~2%). This mixture of particles poses a challenging analytical problem for high-resolution native MS analysis, given the large mass scales involved. We attempt to unravel the particle heterogeneity using both Q-TOF and Orbitrap mass spectrometers extensively modified for analysis of very large assemblies. We show that manipulation of the charging behavior can provide assistance in assigning the correct charge states. Despite their challenging size and heterogeneity, we obtained native mass spectra with resolved series of charge states for both BMV and CCMV, demonstrating that native MS of endogenous multipartite virions is feasible.

  1. A physical interaction between viral replicase and capsid protein is required for genome-packaging specificity in an RNA virus.

    Science.gov (United States)

    Seo, Jang-Kyun; Kwon, Sun-Jung; Rao, A L N

    2012-06-01

    Genome packaging is functionally coupled to replication in RNA viruses pathogenic to humans (Poliovirus), insects (Flock house virus [FHV]), and plants (Brome mosaic virus [BMV]). However, the underlying mechanism is not fully understood. We have observed previously that in FHV and BMV, unlike ectopically expressed capsid protein (CP), packaging specificity results from RNA encapsidation by CP that has been translated from mRNA produced from replicating genomic RNA. Consequently, we hypothesize that a physical interaction with replicase increases the CP specificity for packaging viral RNAs. We tested this hypothesis by evaluating the molecular interaction between replicase protein and CP using a FHV-Nicotiana benthamiana system. Bimolecular fluorescence complementation in conjunction with fluorescent cellular protein markers and coimmunoprecipitation assays demonstrated that FHV replicase (protein A) and CP physically interact at the mitochondrial site of replication and that this interaction requires the N-proximal region from either amino acids 1 to 31 or amino acids 32 to 50 of the CP. In contrast to the mitochondrial localization of CP derived from FHV replication, ectopic expression displayed a characteristic punctate pattern on the endoplasmic reticulum (ER). This pattern was altered to relocalize the CP throughout the cytoplasm when the C-proximal hydrophobic domain was deleted. Analysis of the packaging phenotypes of the CP mutants defective either in protein A-CP interactions or ER localization suggested that synchronization between protein A-CP interaction and its subcellular localization is imperative to confer packaging specificity.

  2. Revegetation following artificial disturbance. Progress report, 1 June 1975--29 February 1976

    International Nuclear Information System (INIS)

    Fraley, L. Jr.

    1976-01-01

    Areas at Rocky Flats that had previously been reseeded by Rocky Flats personnel were evaluated for seeding success. Only one species in the seed mixture, Agropyron smithii (western wheatgrass) made a significant contribution to the stand. Two other species which made important contributions but were not in the seed mixture were Bromus tectorum (cheatgrass) and B. inermis (smooth brome). The vegetation receiving chronic exposure to ionizing radiation at the Grasslands Irradiation Study Area appears to be near equilibrium although electromagnet failure prevented irradiation for approximately 3 months during late summer 1975. Secondary succession is continuing in the sectors given a seasonal, short-term exposure in 1969 but at exposures where the dominant species, Bouteloua gracilis (blue grama) was killed there is no indication that any recovery of the B. gracilis is taking place. In plots that were artificially disturbed by burning, scraping and tilling, recovery patterns in the burned plots most nearly parallel recovery patterns of the areas receiving intermediate damage from exposure to ionizing radiation. For the scraped and tilled plots, recovery patterns most nearly paralleled those receiving heavy damage from exposure to ionizing radiation where all B. gracilis was killed

  3. Cell-to-cell movement of Alfalfa mosaic virus can be mediated by the movement proteins of Ilar-, bromo-, cucumo-, tobamo- and comoviruses and does not require virion formation.

    Science.gov (United States)

    Sánchez-Navarro, Jesús A; Carmen Herranz, María; Pallás, Vicente

    2006-03-01

    RNA 3 of Alfalfa mosaic virus (AMV) encodes the movement protein (MP) and coat protein (CP). Chimeric RNA 3 with the AMV MP gene replaced by the corresponding MP gene of Prunus necrotic ringspot virus, Brome mosaic virus, Cucumber mosaic virus or Cowpea mosaic virus efficiently moved from cell-to-cell only when the expressed MP was extended at its C-terminus with the C-terminal 44 amino acids of AMV MP. MP of Tobacco mosaic virus supported the movement of the chimeric RNA 3 whether or not the MP was extended with the C-terminal AMV MP sequence. The replacement of the CP gene in RNA 3 by a mutant gene encoding a CP defective in virion formation did not affect cell-to-cell transport of the chimera's with a functional MP. A GST pull-down technique was used to demonstrate for the first time that the C-terminal 44 amino acids of the MP of a virus belonging to the family Bromoviridae interact specifically with AMV virus particles. Together, these results demonstrate that AMV RNA 3 can be transported from cell-to-cell by both tubule-forming and non-tubule-forming MPs if a specific MP-CP interaction occurs.

  4. N resource of grasses and N2-fixation of alfalfa in mono-culture and mixture

    International Nuclear Information System (INIS)

    Zhu Shuxiu

    1992-01-01

    The N behavior in alfalfa and gramineous forage grasses, tall fescue, siberian wild rye, wheat grass and awnless brome were studied in potting and pasture experiments in 1986-1988 by using 15 N isotope dilution technique. Comparison was made between the mixed culture and mono-culture. The % Ndff and %Ndfs of grasses were decreased by 14.19% and 20.76% respectively, while %Ndfa of alfalfa was increased by 20.22% in mixed culture as compared with mono-culture. The 15 N and soil N uptake data revealed that this enhancement was largely due to a lower competitive ability for soil N by alfalfa than by grass in mixed stands, causing the alfalfa to depend more on atmospheric N 2 fixation. 20.62%of N of grasses in mixed culture was from the N 2 -fixation by alfalfa, causing N level in root-sphere of alfalfa decreasing, which was considered to be one of the reasons that %Ndfa increased in mixed culture. N transfer may be carried out by the decomposition of roots and nodules of alfalfa plants

  5. Induction of pulsatile secretion of leptin in horses following thyroidectomy.

    Science.gov (United States)

    Buff, Preston R; Messer, Nat T; Cogswell, Andria M; Wilson, David A; Johnson, Philip J; Keisler, Duane H; Ganjam, Venkataseshu K

    2007-02-01

    Endocrine characteristics of Quarter Horse-type mares were determined during a 68 h feed deprivation and again in the same mares following surgical thyroidectomy (THX). A crossover experimental design was implemented, in which mares received brome hay available ad libitum (FED) or were food deprived (RES) for 68 h. Blood samples were collected every 20 min for 48 h, beginning 20 h after the onset of food deprivation. Concentrations of triiodothyronine and thyroxine were undetectable post-THX. Plasma concentrations of thyrotropin were greater post-THX versus pre-THX (P<0 x 001). Plasma concentrations of leptin were greater in the THX FED group than in the THX RES group (P<0 x 01). The existence of leptin pulse secretion was found only in post-THX compared with the same horses pre-THX (P=0 x 02). We theorize that non-pulsatile secretion of leptin may have contributed to the survival of this species, as it evolved in the regions of seasonal availability of food. Lack of pulsatile secretion of leptin may contribute to the accumulation of energy stores by modulating leptin sensitivity.

  6. Vibrational dynamics of icosahedrally symmetric biomolecular assemblies compared with predictions based on continuum elasticity.

    Science.gov (United States)

    Yang, Zheng; Bahar, Ivet; Widom, Michael

    2009-06-03

    Coarse-grained elastic network models elucidate the fluctuation dynamics of proteins around their native conformations. Low-frequency collective motions derived by simplified normal mode analysis are usually involved in biological function, and these motions often possess noteworthy symmetries related to the overall shape of the molecule. Here, insights into these motions and their frequencies are sought by considering continuum models with appropriate symmetry and boundary conditions to approximately represent the true atomistic molecular structure. We solve the elastic wave equations analytically for the case of spherical symmetry, yielding a symmetry-based classification of molecular motions together with explicit predictions for their vibrational frequencies. We address the case of icosahedral symmetry as a perturbation to the spherical case. Applications to lumazine synthase, satellite tobacco mosaic virus, and brome mosaic virus show that the spherical elastic model efficiently provides insights on collective motions that are otherwise obtained by detailed elastic network models. A major utility of the continuum models is the possibility of estimating macroscopic material properties such as the Young's modulus or Poisson's ratio for different types of viruses.

  7. Evolutionary relationships between Rhynchosporium lolii sp. nov. and other Rhynchosporium species on grasses.

    Directory of Open Access Journals (Sweden)

    Kevin M King

    Full Text Available The fungal genus Rhynchosporium (causative agent of leaf blotch contains several host-specialised species, including R. commune (colonising barley and brome-grass, R. agropyri (couch-grass, R. secalis (rye and triticale and the more distantly related R. orthosporum (cocksfoot. This study used molecular fingerprinting, multilocus DNA sequence data, conidial morphology, host range tests and scanning electron microscopy to investigate the relationship between Rhynchosporium species on ryegrasses, both economically important forage grasses and common wild grasses in many cereal growing areas, and other plant species. Two different types of Rhynchosporium were found on ryegrasses in the UK. Firstly, there were isolates of R. commune that were pathogenic to both barley and Italian ryegrass. Secondly, there were isolates of a new species, here named R. lolii, that were pathogenic only to ryegrass species. R. lolii was most closely related to R. orthosporum, but exhibited clear molecular, morphological and host range differences. The species was estimated to have diverged from R. orthosporum ca. 5735 years before the present. The colonisation strategy of all of the different Rhynchosporium species involved extensive hyphal growth in the sub-cuticular regions of the leaves. Finally, new species-specific PCR diagnostic tests were developed that could distinguish between these five closely related Rhynchosporium species.

  8. Ciclo de vida de Anasa litigiosa (Hemiptera: Heteroptera: Coreidae Life cycle of Anasa litigiosa (Hemiptera: Heteroptera: Coreidae

    Directory of Open Access Journals (Sweden)

    Adriana Chacón-López

    2012-06-01

    Full Text Available El objetivo de este trabajo es el estudio del ciclo de vida de Anasa litigiosa Stål. Se recolectaron ejemplares adultos de esta especie que se encontraban sobre plantas de chayote y fueron cultivados en el laboratorio utilizando hojas, tallos y frutos de la misma planta. Se describen e ilustran en detalle todos los estadios de vida, incluyendo notas sobre su biología. Anasa litigiosa se ha recolectado sobre bromeliáceas y cucurbitáceas y es una plaga importante de estas últimas.The aim of this work was the study of the life cycle of Anasa litigiosa Stål. Adults were collected on chayote and they were reared in laboratory using leaves, stems and fruits of chayote. Descriptions and illustrations of all instars of, and notes on its biology are included. This species has been collected in bromeliads and on cucurbits, it is an important pest of cucurbits in Mexico.

  9. Adaptive restoration of river terrace vegetation through iterative experiments

    Science.gov (United States)

    Dela Cruz, Michelle P.; Beauchamp, Vanessa B.; Shafroth, Patrick B.; Decker, Cheryl E.; O’Neil, Aviva

    2014-01-01

    Restoration projects can involve a high degree of uncertainty and risk, which can ultimately result in failure. An adaptive restoration approach can reduce uncertainty through controlled, replicated experiments designed to test specific hypotheses and alternative management approaches. Key components of adaptive restoration include willingness of project managers to accept the risk inherent in experimentation, interest of researchers, availability of funding for experimentation and monitoring, and ability to restore sites as iterative experiments where results from early efforts can inform the design of later phases. This paper highlights an ongoing adaptive restoration project at Zion National Park (ZNP), aimed at reducing the cover of exotic annual Bromus on riparian terraces, and revegetating these areas with native plant species. Rather than using a trial-and-error approach, ZNP staff partnered with academic, government, and private-sector collaborators to conduct small-scale experiments to explicitly address uncertainties concerning biomass removal of annual bromes, herbicide application rates and timing, and effective seeding methods for native species. Adaptive restoration has succeeded at ZNP because managers accept the risk inherent in experimentation and ZNP personnel are committed to continue these projects over a several-year period. Techniques that result in exotic annual Bromus removal and restoration of native plant species at ZNP can be used as a starting point for adaptive restoration projects elsewhere in the region.

  10. The Use of Copper Pesticides in Germany and the Search for Minimization and Replacement Strategies

    Directory of Open Access Journals (Sweden)

    Stefan Kuehne

    2017-02-01

    Full Text Available Copper pesticides used to control fungal and bacterial diseases such as grapes downy mildew (Plasmopara viticola, downy mildew of hops (Pseudoperonospora humili, apple scab (Venturia spp., fireblight (Erwinia amylovora and potato late blight (Phytophthora infestans, play an important role in plant protection. In a 2013 survey of copper application in Germany we found, that while the amounts of copper used per hectare in conventional grape (0.8 kg ha−1, hop (1.7 kg ha−1 and potato-farming (0.8 kg ha−1 were well below those used in organic farming (2.3, 2.6 and 1.4 kg ha−1, respectively, they were nearly identical to those used in apple growing (1.4 kg ha−1. Due to the smaller farming area, only 24% (26.5 tonnes of the total amount of copper was applied in organic farming compared to 76% (84.8 tonnes in conventional farming. Since 2001, the Federal Agency for Agriculture and Food (BLE promoted a copper research and minimization strategy which was funded with a total of C10.2 million. Our status quo analysis of research in this field shows that some progress is being made concerning alternative compounds, resistant varieties and decision support systems. However, it also shows that new approaches are not yet able to replace copper pesticides completely, especially in organic farming. In integrated pest management, copper preparations are important for the necessary active substance rotation and successful resistance management. The availability of such products is often essential for organic grapes, hops and fruit production and for extending the organic farming of these crops. We conclude that the complete elimination of copper pesticides is not yet practicable in organic farming as the production of several organic crops would become unprofitable and may lead to organic farmers reverting to conventional production. Several existing copper reduction strategies were, however, identified, and some, like modified forecast models adapted to

  11. PERAKITAN VARIETAS HIBRIDA JAGUNG MANIS BERDAYA HASIL TINGGI DAN TAHAN TERHADAP PENYAKIT BULAI

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    Sriani Sujiprihati

    2012-12-01

    Full Text Available Sweet corn is a result of recessive mutation which occurs naturally in gene that controls the conversion of sugar into starch in corn seed endosperm. There are 3 main genes that affect corn sweetness, namely sugary gene (su, sugary enhancer gene (se, and shrunken gene (sh2. This study aims to obtain a general combining ability value for the sweet corn lines, which will be the parent in diallel crosses; obtain the information of general combining ability, specific combining ability, and heterosis value for sweet corn lines; and obtain one or more promising single cross hybrids that will be potential for high yield and resistance to downy mildew disease. The study was conducted from April 2009 until November 2011 at the Experimental Field Centre for Cereal Plant Study (BALITSEREAL, Maros, South Sulawesi. The results showed that five genotypes had moderately high yield: Mr4/SC/BC4-3-1B, Mr14/SC/BC4-6-1B, Mr11/SC/BC4-3-1B, Mr14/SC/BC3-8-1B, and Mr12/SC/BC4-6-1B. The attack level of downy mildew that was classified as resistant has 0 to 7% rate. The combination of crosses that produce better productivity than all the varieties are: C × A (Mr11/SC/BC4-2-1B-1 × Mr12/SC/BC4-5-B-1, A × D (Mr12/SC/BC4-5-B-1 × Mr11/SC/BC4-2-1B-1, E × B (Mr12/SC/BC3-3-1B -1 × Mr14/SC/BC4-6-1B-1, and B × D (Mr11/SC/BC4-2-1B-1 × Mr14/SC/BC4-6-1B-1 . Five hybrids can be continued for the preliminary testing of yields. Twelve candidate varieties do not have yield different than the checked varieties, so it can proceed to a multilocation trials to explore the advantages that can be released as new varieties.

  12. Características morfológicas e fitossanitárias de variedades de roseira na etapa de classificação Morphological and fitossanitary characteristics in rose varieties on classification stage

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    Beatriz Meireles Barguil

    2010-07-01

    Full Text Available A qualidade da haste floral de roseira é afetada por inúmeros defeitos, como botão pequeno ou presença de doenças e ferimentos. Este trabalho teve como objetivo avaliar as características morfológicas (comprimento e retidão da haste e do botão floral e fitossanitárias (incidência de míldio, oídio, mofo cinzento e dano causado por lagarta de sete variedades de roseira cultivadas em ambiente protegido. As características foram observadas em três avaliações. O comprimento médio de haste floral variou de 56,1 a 83,3cm, enquanto que o comprimento médio dos botões variou de 4,7 a 5,2cm. Foram observados sintomas de míldio, oídio, mofo cinzento e injúria causada por lagarta nas hastes florais, sendo o oídio o principal problema fitossanitário observado, tendo afetado de 2,9 a 41,3% das hastes, dependendo da variedade. Cerca de 70% das hastes de cada variedade apresentaram características do tipo de C ou D durante a etapa de classificação. Esses resultados reforçam a necessidade da avaliação das diversas características das variedades adquiridas, antes da implementação do cultivo comercial.The quality of the rose's floral stem can be affected by numerous faults as small button or diseases and injuries. This study aimed to evaluate the morphological (length and rightness of stem and rose bud and fitossanitary (downy mildew, powdery mildew, gray mold and caterpillar damage characteristics in seven varieties of rose grown in a greenhouse. The characteristics were analyzed three times. The average length of floral stems ranged from 56.1 to 83.3cm, while the average length of buttons ranged from 4.7 to 5.2cm in the varieties evaluated. Symptoms of downy mildew, powdery mildew, gray mold and damage caused by caterpillar were observed, although powdery mildew were the main problem witch affect from 2,9 to 41,3% of floral stems. About 70% of the stems of all varieties showed characteristics of type C or D during the

  13. Pengaruh Stomata dan Klorofil pada Ketahanan Beberapa Varietas Jagung terhadap Penyakit Bulai

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    Christine Agustamia

    2016-12-01

    Full Text Available Resistant varieties are more advisable for controlling maize downy mildew compared with fungicides which is not effective and not environmentally friendly. This study is aimed to determine resistance of some varieties of maize against downy mildew. The maize varieties used were BS 0114, BS 0214, BS 0314, PAC 105, Sweet Corn and BISI 2. The parameters measured were disease incidence and intensity, chlorophyll content of leaves, stomatal density and plants dry weight. Data were analyzed by using analysis of variance (ANOVA and Duncan's Multiple Range Test (DMRT. The results indicated that PAC 105, BS 0214 and BS 0314 were resistant varieties, while BS 0114, Sweet Corn and BISI 2 were susceptible. PAC 105 variety has the lowest stomatal density (65.353/mm2, and Sweet Corn variety has the highest stomatal density (110.79/mm2. Stomatal density was positively correlated with the disease intensity. Higher disease intensity has lower chlorophyll content compared with the lower intensity. PAC 105 variety has the highest chlorophyll content and plant dry weight, while Sweet Corn variety has the lowest chlorophyll content and plant dry weight.   INTISARI   Penggunaan varietas tahan bulai lebih dianjurkan digunakan dalam pengendalian penyakit bulai pada jagung dibandingkan dengan penggunaan fungisida karena tidak efektif dan tidak ramah lingkungan. Penelitian ini bertujuan untuk mengetahui ketahanan beberapa varietas jagung terhadap penyakit bulai. Varietas yang digunakan meliputi BS 0114, BS 0214, BS 0314, PAC 105, jagung manis, dan BISI 2. Parameter yang diamati adalah insidensi dan intensitas penyakit, kandungan klorofil setelah inokulasi, kerapatan stomata dan berat kering tanaman. Data yang diperoleh diuji dengan analisis varians (ANOVA dan uji lanjut dengan Duncan’s Multiple Range Test (DMRT. Hasil penelitian rumah kaca menunjukkan bahwa varietas PAC 105, BS 0214 dan BS 0314 merupakan varietas tahan, sedangkan varietas BS 0114, jagung manis dan

  14. DEVELOPMENT AND COMPREHENSIVE ASSESSMENT OF BULBOUS FORMS OF INTERSPECIFIC HYBRIDS OF ONION ALLIUM CEPA x A. FISTULOSUM

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    V. S. Romanov

    2016-01-01

    Full Text Available One of the way of increasing of genetic variability of onion (Allium cepa L. is the interspecific hybridization. Development of onion interspecific hybrids consists of the study of initial breeding forms, its heterogeneity, ways of crossing and pollination, overcoming of outbreeding problem, sterility and weak fertility of the hybrids of first and next generations, specifics of hybrid’s seeds development, identification and selection of recombinant forms with breeding valuable traits. The stages of development of the bulbous forms of interspecific hybrids of onion are presented in the article. The study was conducted in the “All-Russian Scientific Research Institute of vegetable breeding and seed production” of the Moscow region. The plants of inbreed progenies I1-5 from BC1-2F5 of bulb forms of interspecific hybrids A. cepa х A. Fistulosum as well as the parental forms were analyzed. The breeding and phytopathological assessment of recombinant forms of onion interspecific hybrids was done for qualitative and quantitative traits and for resistance to downy mildew. Using the individual selection for quality and quantity traits, it was found that the forms, whose traits were not undergo the inbreeding depression because of the higher homozygosity can be used for development of linear initial material for breeding for heterosis. The forms with the inbreeding depression have to be used for crossbreeding. Along with increasing of homozygosity, the new modified genotypes appear because of potential variability and genes recombination. It allows to make the purposive selection of recombinant forms for valuable traits. The selected onion forms from inbreed progenies of I1-5 from BC1-2F5 which have bulbs of flat and well-rounded-flat shape are characterized by high resistance to downy mildew and bulbs with good storage ability. The selection process of the recombinant forms from progenies of onion interspecific hybrids obtained based on repeated

  15. Multiple candidate effectors from the oomycete pathogen Hyaloperonospora arabidopsidis suppress host plant immunity.

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    Georgina Fabro

    2011-11-01

    Full Text Available Oomycete pathogens cause diverse plant diseases. To successfully colonize their hosts, they deliver a suite of effector proteins that can attenuate plant defenses. In the oomycete downy mildews, effectors carry a signal peptide and an RxLR motif. Hyaloperonospora arabidopsidis (Hpa causes downy mildew on the model plant Arabidopsis thaliana (Arabidopsis. We investigated if candidate effectors predicted in the genome sequence of Hpa isolate Emoy2 (HaRxLs were able to manipulate host defenses in different Arabidopsis accessions. We developed a rapid and sensitive screening method to test HaRxLs by delivering them via the bacterial type-three secretion system (TTSS of Pseudomonas syringae pv tomato DC3000-LUX (Pst-LUX and assessing changes in Pst-LUX growth in planta on 12 Arabidopsis accessions. The majority (~70% of the 64 candidates tested positively contributed to Pst-LUX growth on more than one accession indicating that Hpa virulence likely involves multiple effectors with weak accession-specific effects. Further screening with a Pst mutant (ΔCEL showed that HaRxLs that allow enhanced Pst-LUX growth usually suppress callose deposition, a hallmark of pathogen-associated molecular pattern (PAMP-triggered immunity (PTI. We found that HaRxLs are rarely strong avirulence determinants. Although some decreased Pst-LUX growth in particular accessions, none activated macroscopic cell death. Fewer HaRxLs conferred enhanced Pst growth on turnip, a non-host for Hpa, while several reduced it, consistent with the idea that turnip's non-host resistance against Hpa could involve a combination of recognized HaRxLs and ineffective HaRxLs. We verified our results by constitutively expressing in Arabidopsis a sub-set of HaRxLs. Several transgenic lines showed increased susceptibility to Hpa and attenuation of Arabidopsis PTI responses, confirming the HaRxLs' role in Hpa virulence. This study shows TTSS screening system provides a useful tool to test whether

  16. Downey mildew, powdery mildew and black spot in the agroecological production of roses

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    Márcia de Nazaré Oliveira Ribeiro

    2012-06-01

    Full Text Available The rosebush is a crop with high nutritional requirements, requiring frequent replacement of fertilizers, which can lead to soil salinity. The agroecological farming is an alternative to prevent the environmental impacts provided by the overuse of fertilizers and pesticides. The objective was to assess the incidence and severity of downey mildew, powdery mildew and black spot in cultivars of roses and observe which one would have better adjustment to agroecological farming system. The experiment was conducted at EPAMIG in São João del-Rei, MG, in open fields, in two production systems: agroecological and conventional. The experimental design was randomized blocks with six treatments corresponding to the agroecological farming of six cultivars of roses plus two additional treatments corresponding to the conventional cultivation of two cultivars of rose, totaling eight treatments (6+2 with four repetitions giving 32 experimental plots. Agroecosystem were tested in six cultivars of roses, which are: Hollywood, Capri, Carola, Grand Gala, Greta and Vegas. In the conventional system were tested cultivars Carola and Vegas. Agroecosystem production management used only authorized/registered products for organic agriculture and production techniques inherent in this system. Green manures Canavalia ensiformis and Arachis pintoi were planted between the lines and bed edges and fertilization was performed with biofertilizers. Weekly samples were taken assess incidence and severity of downy mildew, powdery mildew and black spot. Incidence was determined by the presence or absence of leaves with lesions in the experimental unit. Severity was obtained with aid of diagrammatic scales. Percentages of severity and incidence were transformed into areas under the curve of progress of severity (AUCPS and of incidence (AUCPI. It was observed that the cultivars Capri, Hollywood and Vegas in agroecological farming were more susceptible to black spot due to higher

  17. A review on important maize diseases and their management in Nepal

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    Subash Subedi

    2015-12-01

    Full Text Available In Nepal, maize ranks second after rice both in area and production. In recent years, maize area and production has shown a steady increase, but productivity has been low (2.46 t/ha. The major maize producing regions in Nepal are mid hill (72.85%, terai (17.36% and high hill (9.79% respectively. A literature review was carried out to explore major maize diseases and their management in Nepal. The omnipresent incidence of diseases at the pre harvest stage has been an important bottleneck in increasing production. Till now, a total of 78 (75 fungal and 3 bacterial species are pathogenic to maize crop in Nepal. The major and economically important maize diseases reported are Gray leaf spot, Northern leaf blight, Southern leaf Blight, Banded leaf and sheath blight, Ear rot, Stalk rot, Head smut, Common rust, Downy mildew and Brown spot. Information on bacterial and virus diseases, nematodes and yield loss assessment is also given. Description of the major maize diseases, their causal organisms, distribution, time and intensity of disease incidence, symptoms, survival, spreads, environmental factors for disease development, yield losses and various disease management strategies corresponded to important maize diseases of Nepal are gathered and compiled thoroughly from the available publications. Concerted efforts of NARC commodity programs, divisions, ARS and RARS involving research on maize pathology and their important outcomes are mentioned. The use of disease management methods focused on host resistance has also been highlighted.

  18. Lead pollution of road-side vegetation

    Energy Technology Data Exchange (ETDEWEB)

    Quinche, J P; Zuber, R; Bovay, E

    1969-01-01

    In Switzerland, investigations have been made in 1967/1968 concerning the distribution of lead issued from the antiknocking additive of petrol. Observations show that the deposits in meadows in the immediate surrounding (first meter) of roads and highways with high traffic density were especially high (50-100 ppm in dry matter). The pollution is still perceptible even as far as 50 meters from the road. Moreover, during the summer (July and August), a second zone of high lead accumulation (more than 100 ppm) was detected 50 to 100 m from the road, particularly along the highways. This probably is caused by certain climatic conditions and the increase of traffic volume. With regard to fruits, only the downy species (e.g. apricots, peaches) retain some quantities of lead on their skin. Vegetables with large leaves, e.g. lettuce, spinach, and particularly vegetables with definite dissected foliage, such as fennel and parsley, may accumulate relatively high quantities of lead. According to some authors, up to 50 percent of these deposits may be eliminated by washing with water. Conversely, root vegetables (e.g. carrots, onions) do not show a perceptible lead contamination. Likewise the flesh of fruits is not markedly polluted by lead. Trials with foddering milk cows using hay harvested along a highway are not yet analyzed. The results from these trials should permit determining the proportion of lead which remains in the tissues (meat etc.) or passes over into the milk.

  19. Inter- and intra-specific responses to elevated ozone and chamber climate in northern birches

    International Nuclear Information System (INIS)

    Manninen, S.; Huttunen, S.; Vanhatalo, M.; Pakonen, T.; Haemaelaeinen, A.

    2009-01-01

    We studied the responses of micropropagated, northern provenances of downy, mountain and silver birches to elevated ozone (O 3 ) and changing climate using open-top chambers (OTCs). Contrary to our hypothesis, northern birches were sensitive to O 3 , i.e. O 3 levels of 31-36 ppb reduced the leaf and root biomasses by -10%, whereas wood biomass was affected to a lesser extent. The warmer and drier OTC climate enhanced growth in general, though there were differences among the species and clones, e.g. in bud burst and biomass production. Inter- and intra-specific responses to O 3 and changing climate relate to traits such as allocation patterns between the above- and belowground parts (i.e. root/shoot ratio), which further relate to nutrient and water economy. Our experiments may have mimicked future conditions quite well, but only long-term field studies can yield the information needed to forecast responses at both tree and ecosystem levels. - Northern birches are responsive to ambient ozone levels.

  20. Preliminary study on biomarkers for the fungal resistance in Vitis vinifera leaves.

    Science.gov (United States)

    Batovska, Daniela Ilieva; Todorova, Iva Todorova; Nedelcheva, Daniela Valentinova; Parushev, Stoyan Parushev; Atanassov, Atanas Ivanov; Hvarleva, Tzvetanka Dimitrova; Djakova, Galina Jordanova; Bankova, Vassya Stefanova; Popov, Simeon Simeonov

    2008-05-26

    We examined the leaf chemical composition of six seedlings obtained by self-pollination of the Bulgarian wine-making variety Storgozia as well as the cultivar Bouquet, which is the susceptible parent of Storgozia. The chemical composition was investigated in the framework of a program for identification of metabolites associated with disease resistance in grape-vine. Acetone, dichloromethane and butanol extracts, as well as volatiles obtained from fresh material were analyzed by GC/MS. Based on the correlations of the GC/MS data and estimated resistance of the leaves towards the etiological agents of powdery mildew, downy mildew and botrytis as biomarkers for the fungal resistance, we proposed 16 individual metabolites--alpha- and gamma-tocopherol, squalene, alpha-amyrine, stigmasta-3,5-diene-7-one, hexahydrofarnesyl acetone, glycolic acid, 3-hydroxybutanoic acid, 3-hydroxycaproic acid, malic acid, tartaric acid, erythronic acid, arabinoic acid, monoethyl phosphate, undecyl laurate and isopropyl myristate. The obtained correlations were confirmed by cluster analysis.

  1. SOYBEAN AND CASEIN HYDROLYSATES INDUCE GRAPEVINE IMMUNE RESPONSES AND RESISTANCE AGAINST PLASMOPARA VITICOLA

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    Nihed eLachhab

    2014-12-01

    Full Text Available Plasmopara viticola, the causal agent of grapevine downy mildew, is one of the most devastating grape pathogen in Europe and North America. Although phytochemicals are used to control pathogen infections, the appearance of resistant strains and the concern for possible adverse effects on environment and human health are increasing the search for alternative strategies. In the present investigation, we successfully tested two protein hydrolysates from soybean (soy and casein (cas to trigger grapevine resistance against P. viticola. On Vitis vinifera cv. Marselan plants, the application of soy and cas reduced the infected leaf surface by 76 and 63%, as compared to the control, respectively. Since both hydrolysates might trigger the plant immunity, we investigated their ability to elicit grapevine defence responses. On grapevine cell suspensions, a different free cytosolic calcium signature was recorded for each hydrolysate, whereas a similar transient phosphorylation of two MAP kinases of 45 and 49 kDa was observed. These signalling events were followed by transcriptome reprogramming, including the up-regulation of defence genes encoding pathogenesis-related (PR proteins and the stilbene synthase enzyme responsible for the biosynthesis of resveratrol, the main grapevine phytoalexin. Liquid chromatography analyses confirmed the production of resveratrol and its dimer metabolites, δ- and ε-viniferins. Overall, soy effects were more pronounced as compared to the cas one. Both hydrolysates proved to act as elicitors to enhance grapevine immunity against pathogen attack.

  2. Antimicrobial Activity of Resveratrol Analogues

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    Malik Chalal

    2014-06-01

    Full Text Available Stilbenes, especially resveratrol and its derivatives, have become famous for their positive effects on a wide range of medical disorders, as indicated by a huge number of published studies. A less investigated area of research is their antimicrobial properties. A series of 13 trans-resveratrol analogues was synthesized via Wittig or Heck reactions, and their antimicrobial activity assessed on two different grapevine pathogens responsible for severe diseases in the vineyard. The entire series, together with resveratrol, was first evaluated on the zoospore mobility and sporulation level of Plasmopara viticola (the oomycete responsible for downy mildew. Stilbenes displayed a spectrum of activity ranging from low to high. Six of them, including the most active ones, were subsequently tested on the development of Botrytis cinerea (fungus responsible for grey mold. The results obtained allowed us to identify the most active stilbenes against both grapevine pathogens, to compare the antimicrobial activity of the evaluated series of stilbenes, and to discuss the relationship between their chemical structure (number and position of methoxy and hydroxy groups and antimicrobial activity.

  3. Triboelectric Nanogenerator Enabled Body Sensor Network for Self-Powered Human Heart-Rate Monitoring.

    Science.gov (United States)

    Lin, Zhiming; Chen, Jun; Li, Xiaoshi; Zhou, Zhihao; Meng, Keyu; Wei, Wei; Yang, Jin; Wang, Zhong Lin

    2017-09-26

    Heart-rate monitoring plays a critical role in personal healthcare management. A low-cost, noninvasive, and user-friendly heart-rate monitoring system is highly desirable. Here, a self-powered wireless body sensor network (BSN) system is developed for heart-rate monitoring via integration of a downy-structure-based triboelectric nanogenerator (D-TENG), a power management circuit, a heart-rate sensor, a signal processing unit, and Bluetooth module for wireless data transmission. By converting the inertia energy of human walking into electric power, a maximum power of 2.28 mW with total conversion efficiency of 57.9% was delivered at low operation frequency, which is capable of immediately and sustainably driving the highly integrated BSN system. The acquired heart-rate signal by the sensor would be processed in the signal process circuit, sent to an external device via the Bluetooth module, and displayed on a personal cell phone in a real-time manner. Moreover, by combining a TENG-based generator and a TENG-based sensor, an all-TENG-based wireless BSN system was developed, realizing continuous and self-powered heart-rate monitoring. This work presents a potential method for personal heart-rate monitoring, featured as being self-powered, cost-effective, noninvasive, and user-friendly.

  4. Morphological and genetic identification and isotopic study of the hair of a cave lion (Panthera spelaea Goldfuss, 1810) from the Malyi Anyui River (Chukotka, Russia)

    Science.gov (United States)

    Chernova, O. F.; Kirillova, I. V.; Shapiro, B.; Shidlovskiy, F. K.; Soares, A. E. R.; Levchenko, V. A.; Bertuch, F.

    2016-06-01

    We present the first detailed analyses of the preserved hair of a cave lion (Panthera spelaea Goldfuss, 1810). The hair was found in association with a skeleton that was recovered recently from perennially frozen Pleistocene sediments in the lower reaches of the Malyi Anyui River (Chukotka, Russia). We extract mitochondrial DNA from the hair to confirm its taxonomic identity, and perform detailed morphological analyses of the color and structure of the hair using light optical microscopy and SEM. In addition, we compare the cave lion hair to hair taken from the back and mane of an African lion. We find that cave lion hair is similar but not identical to that of the present-day lion. In addition to slightly different coloration, cave lions had a very thick and dense undercoat comprising closed and compressed wavy downy hair with a medulla. In addition, while the microstructures of the medulla and cortex of cave lion hair are similar in extinct and living lions, the cuticular scales of cave lion hair are higher than those in living lions, suggesting that cave lion hair is stronger and more robust than that of living lions. We hypothesize that the differences between cave lion hair and present-day lion hair may be due to adaptations of cave lions to the harsh climatic and environmental conditions of the Pleistocene Ice Ages.

  5. Quantitative determination on heavy metals in different stages of wine production by Total Reflection X-ray Fluorescence and Energy Dispersive X-ray Fluorescence: Comparison on two vineyards

    Energy Technology Data Exchange (ETDEWEB)

    Pessanha, Sofia [Centro Fisica Atomica, Departamento de Fisica, Faculdade de Ciencias, Universidade de Lisboa, Av. Prof. Gama Pinto, 2, 1649-003 Lisboa (Portugal); Carvalho, Maria Luisa, E-mail: luisa@cii.fc.ul.p [Centro Fisica Atomica, Departamento de Fisica, Faculdade de Ciencias, Universidade de Lisboa, Av. Prof. Gama Pinto, 2, 1649-003 Lisboa (Portugal); Becker, Maria; Bohlen, Alex von [Institute for analytical Sciences, Bunsen-Kirchhoff-Str. 11, 44139 Dortmund (Germany)

    2010-06-15

    The purpose of this study is to determine the elemental content, namely heavy metals, of samples of vine-leaves, grapes must and wine. In order to assess the influence of the vineyard age on the elemental content throughout the several stages of wine production, elemental determinations of trace elements were made on products obtained from two vineyards aged 6 and 14 years from Douro region. The elemental content of vine-leaves and grapes was determined by Energy Dispersive X-Ray Fluorescence (EDXRF), while analysis of the must and wine was performed by Total Reflection X-ray Fluorescence (TXRF). Almost all elements present in wine and must samples did not exceed the recommended values found in literature for wine. Bromine was present in the 6 years old wine in a concentration 1 order of magnitude greater than what is usually detected. The Cu content in vine-leaves from the older vineyard was found to be extremely high probably due to excessive use of Cu-based fungicides to control vine downy mildew. Higher Cu content was also detected in grapes although not so pronounced. Concerning the wine a slightly higher level was detected on the older vineyard, even so not exceeding the recommended value.

  6. Effector-mediated discovery of a novel resistance gene against Bremia lactucae in a nonhost lettuce species.

    Science.gov (United States)

    Giesbers, Anne K J; Pelgrom, Alexandra J E; Visser, Richard G F; Niks, Rients E; Van den Ackerveken, Guido; Jeuken, Marieke J W

    2017-11-01

    Candidate effectors from lettuce downy mildew (Bremia lactucae) enable high-throughput germplasm screening for the presence of resistance (R) genes. The nonhost species Lactuca saligna comprises a source of B. lactucae R genes that has hardly been exploited in lettuce breeding. Its cross-compatibility with the host species L. sativa enables the study of inheritance of nonhost resistance (NHR). We performed transient expression of candidate RXLR effector genes from B. lactucae in a diverse Lactuca germplasm set. Responses to two candidate effectors (BLR31 and BLN08) were genetically mapped and tested for co-segregation with disease resistance. BLN08 induced a hypersensitive response (HR) in 55% of the L. saligna accessions, but responsiveness did not co-segregate with resistance to Bl:24. BLR31 triggered an HR in 5% of the L. saligna accessions, and revealed a novel R gene providing complete B. lactucae race Bl:24 resistance. Resistant hybrid plants that were BLR31 nonresponsive indicated other unlinked R genes and/or nonhost QTLs. We have identified a candidate avirulence effector of B. lactucae (BLR31) and its cognate R gene in L. saligna. Concurrently, our results suggest that R genes are not required for NHR of L. saligna. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

  7. Rin4 causes hybrid necrosis and race-specific resistance in an interspecific lettuce hybrid.

    Science.gov (United States)

    Jeuken, Marieke J W; Zhang, Ningwen W; McHale, Leah K; Pelgrom, Koen; den Boer, Erik; Lindhout, Pim; Michelmore, Richard W; Visser, Richard G F; Niks, Rients E

    2009-10-01

    Some inter- and intraspecific crosses may result in reduced viability or sterility in the offspring, often due to genetic incompatibilities resulting from interactions between two or more loci. Hybrid necrosis is a postzygotic genetic incompatibility that is phenotypically manifested as necrotic lesions on the plant. We observed hybrid necrosis in interspecific lettuce (Lactuca sativa and Lactuca saligna) hybrids that correlated with resistance to downy mildew. Segregation analysis revealed a specific allelic combination at two interacting loci to be responsible. The allelic interaction had two consequences: (1) a quantitative temperature-dependent autoimmunity reaction leading to necrotic lesions, lethality, and quantitative resistance to an otherwise virulent race of Bremia lactucae; and (2) a qualitative temperature-independent race-specific resistance to an avirulent race of B. lactucae. We demonstrated by transient expression and silencing experiments that one of the two interacting genes was Rin4. In Arabidopsis thaliana, RIN4 is known to interact with multiple R gene products, and their interactions result in hypersensitive resistance to Pseudomonas syringae. Site-directed mutation studies on the necrosis-eliciting allele of Rin4 in lettuce showed that three residues were critical for hybrid necrosis.

  8. Rin4 Causes Hybrid Necrosis and Race-Specific Resistance in an Interspecific Lettuce Hybrid[W

    Science.gov (United States)

    Jeuken, Marieke J.W.; Zhang, Ningwen W.; McHale, Leah K.; Pelgrom, Koen; den Boer, Erik; Lindhout, Pim; Michelmore, Richard W.; Visser, Richard G.F.; Niks, Rients E.

    2009-01-01

    Some inter- and intraspecific crosses may result in reduced viability or sterility in the offspring, often due to genetic incompatibilities resulting from interactions between two or more loci. Hybrid necrosis is a postzygotic genetic incompatibility that is phenotypically manifested as necrotic lesions on the plant. We observed hybrid necrosis in interspecific lettuce (Lactuca sativa and Lactuca saligna) hybrids that correlated with resistance to downy mildew. Segregation analysis revealed a specific allelic combination at two interacting loci to be responsible. The allelic interaction had two consequences: (1) a quantitative temperature-dependent autoimmunity reaction leading to necrotic lesions, lethality, and quantitative resistance to an otherwise virulent race of Bremia lactucae; and (2) a qualitative temperature-independent race-specific resistance to an avirulent race of B. lactucae. We demonstrated by transient expression and silencing experiments that one of the two interacting genes was Rin4. In Arabidopsis thaliana, RIN4 is known to interact with multiple R gene products, and their interactions result in hypersensitive resistance to Pseudomonas syringae. Site-directed mutation studies on the necrosis-eliciting allele of Rin4 in lettuce showed that three residues were critical for hybrid necrosis. PMID:19855048

  9. Highly abundant and stage-specific mRNAs in the obligate pathogen Bremia lactucae.

    Science.gov (United States)

    Judelson, H S; Michelmore, R W

    1990-01-01

    Germinating spores of the obligate pathogen Bremia lactucae (lettuce downy mildew) contain several unusually abundant species of mRNA. Thirty-nine cDNA clones corresponding to prevalent transcripts were isolated from a library synthesized using poly(A)+ RNA from germinating spores; these clones represented only five distinct classes. Each corresponding mRNA accounted for from 0.4 to 9 percent by mass of poly(A)+ RNA from germinating spores and together represented greater than 20 percent of the mRNA. The expression of the corresponding genes, and a gene encoding Hsp70, was analyzed in spores during germination and during growth in planta. The Hsp70 mRNA and mRNA from one abundant cDNA clone (ham34) were expressed constitutively. Two clones (ham9 and ham12) hybridized only to mRNA from spores and germinating spores. Two clones (ham37 and ham27) showed hybridization specific to germinating spores. Quantification of the number of genes homologous to each cDNA clone indicated that four clones corresponded to one or two copies per haploid genome, and one hybridized to an approximately 11-member family of genes. A sequence of the gene corresponding to ham34 was obtained to investigate its function and to identify sequences conferring high levels of gene expression for use in constructing vectors for the transformation of B. lactucae.

  10. Columbia River wildlife mitigation habitat evaluation procedures report: Scotch Creek Wildlife Area, Berg Brothers, and Douglas County pygmy rabbit projects

    International Nuclear Information System (INIS)

    Ashley, P.R.; Ratassepp, J.; Berger, M.; Judd, S.L.

    1997-01-01

    This Habitat Evaluation Procedure study was conducted to determine baseline habitat units (HUs) on the Scotch Creek, Mineral Hill, Pogue Mountain, Chesaw and Tunk Valley Habitat Areas (collectively known as the Scotch Creek Wildlife Area) in Okanogan County, Sagebrush Flat and the Dormaler property in Douglas County, and the Berg Brothers ranch located in Okanogan County within the Colville Reservation. A HEP team comprised of individuals from the Washington Department of Fish and Wildlife, the Confederated Tribes of the Colville Reservation, and the Natural Resources Conservation Service (Appendix A) conducted baseline habitat surveys using the following HEP evaluation species: mule deer (Odocoileus hemionus), sharp-tailed grouse (Tympanuchus phasianellus), pygmy rabbit (Brachylagus idahoensis), white-tailed deer (Odocoileus virginiana), mink (Mustela vison), Canada goose (Branta canadensis), downy woodpecker (Picoides pubescens), Lewis woodpecker (Melanerpes lewis), and Yellow warbler (Dendroica petechia). Results of the HEP analysis are listed below. General ratings (poor, marginal, fair, etc.,) are described in Appendix B. Mule deer habitat was marginal lacking diversity and quantify of suitable browse species. Sharp-tailed grouse habitat was marginal lacking residual nesting cover and suitable winter habitat Pygmy rabbit habitat was in fair condition except for the Dormaier property which was rated marginal due to excessive shrub canopy closure at some sites. This report is an analysis of baseline habitat conditions on mitigation project lands and provides estimated habitat units for mitigation crediting purposes. In addition, information from this document could be used by wildlife habitat managers to develop management strategies for specific project sites

  11. Benzothiadiazole affects the leaf proteome in arctic bramble (Rubus arcticus).

    Science.gov (United States)

    Hukkanen, Anne; Kokko, Harri; Buchala, Antony; Häyrinen, Jukka; Kärenlampi, Sirpa

    2008-11-01

    Benzothiadiazole (BTH) induces resistance to the downy mildew pathogen, Peronospora sparsa, in arctic bramble, but the basis for the BTH-induced resistance is unknown. Arctic bramble cv. Mespi was treated with BTH to study the changes in leaf proteome and to identify proteins with a putative role in disease resistance. First, BTH induced strong expression of one PR-1 protein isoform, which was also induced by salicylic acid (SA). The PR-1 was responsive to BTH and exogenous SA despite a high endogenous SA content (20-25 microg/g fresh weight), which increased to an even higher level after treatment with BTH. Secondly, a total of 792 protein spots were detected in two-dimensional gel electrophoresis, eight proteins being detected solely in the BTH-treated plants. BTH caused up- or down-regulation of 72 and 31 proteins, respectively, of which 18 were tentatively identified by mass spectrometry. The up-regulation of flavanone-3-hydroxylase, alanine aminotransferase, 1-aminocyclopropane-1-carboxylate oxidase, PR-1 and PR-10 proteins may partly explain the BTH-induced resistance against P. sparsa. Other proteins with changes in intensity appear to be involved in, for example, energy metabolism and protein processing. The decline in ATP synthase, triosephosphate isomerase, fructose bisphosphate aldolase and glutamine synthetase suggests that BTH causes significant changes in primary metabolism, which provides one possible explanation for the decreased vegetative growth of foliage and rhizome observed in BTH-treated plants.

  12. Global associations between birds and vane-dwelling feather mites.

    Science.gov (United States)

    Doña, Jorge; Proctor, Heather; Mironov, Sergey; Serrano, David; Jovani, Roger

    2016-11-01

    Understanding host-symbiont networks is a major question in evolutionary ecology. Birds host a great diversity of endo- and ectosymbiotic organisms, with feather mites (Arachnida: Acariformes: Analgoidea, Pterolichoidea) being among the most diverse of avian symbionts. A global approach to the ecology and evolution of bird-feather-mite associations has been hampered because of the absence of a centralized data repository. Here we present the most extensive data set of associations between feather mites and birds. Data include 12 036 records of 1887 feather mite species located on the flight feathers of 2234 bird species from 147 countries. Feather mites typically located inside quills, on the skin, or on downy body feathers are not included. Data were extracted from 493 published sources dating from 1882 to 2015. Data exploration shows that although most continents and bird families are represented, most bird species remain unexplored for feather mites. Nevertheless, this is the most comprehensive data set available for enabling global macroecological analyses of feather mites and their hosts, such as ecological network analyses. This metadata file outlines the structure of these data and provides primary references for all records used. © 2016 by the Ecological Society of America.

  13. The Pomatocalpa maculosum Complex (Orchidaceae Resolved by Multivariate Morphometric Analysis

    Directory of Open Access Journals (Sweden)

    Santi Watthana

    2006-03-01

    Full Text Available Principal components analysis (PCA was employed to analyse the morphological variation among 63 herbarium specimens tentatively identified as Pomatocalpa andamanicum (Hook.f. J. J. Sm., P. koordersii (Rolfe J. J. Sm., P. latifolium (Lindl. J. J. Sm., P. linearifolium Seidenf., P. maculosum (Lindl. J. J. Sm., P. marsupiale (Kraenzl. J. J. Sm., P. naevatum J. J. Sm., or P. siamense (Rolfe ex Downie Summerh. Thirty-seven quantitative and 5 binary characters were included in the analyses. Taxa were delimited according to the observed clustering of specimens in the PCA plots, diagnostic characters were identified, and the correct nomenclature was established through examination of type material. Four species could be recognized viz, P. diffusum Breda (syn. P. latifolium, P. fuscum (Lindl. J. J. Sm. (syn. P. latifolium, P. marsupiale (syn. P. koordersii and P. maculosum. For the latter species, two subspecies could be recognized, viz P. maculosum (Lindl. J. J. Sm. subsp. maculosum (syn. P. maculosum, P. naevatum p.p. and P. maculosum (Lindl. J. J. Sm. subsp. andamanicum (Hook.f. S. Watthana (syn. P. andamanicum, P. linearifolium, P. siamense, P. naevatum p.p.. An identification key and a taxonomic synopsis are provided.

  14. Impact of agrochemicals on Peronospora sparsa and phenolic profiles in three Rubus arcticus cultivars.

    Science.gov (United States)

    Hukkanen, Anne; Kostamo, Katri; Kärenlampi, Sirpa; Kokko, Harri

    2008-02-13

    The main arctic bramble ( Rubus arcticus) cultivars are susceptible to downy mildew ( Peronospora sparsa), which seriously threatens the cultivation. The efficiency of Aliette, Euparen M, phosphite-containing Phosfik, Phostrol, Farm-Fos-44, and Kaliumfosfiet, as well as Bion was evaluated in the greenhouse. Fewer symptoms and less Peronospora DNA were found in plants treated with Euparen M and Bion, whereas Aliette, Phosfik, and Phostrol gave moderate protection. Three arctic bramble cultivars showed varying susceptibility to P. sparsa. An inexpensive and fast in vitro plate test gave results parallel with those obtained in the greenhouse. Quantitative differences were found in the phenolic profiles of the leaves of different cultivars and in different treatments. Several phenolic compounds were tentatively identified in arctic bramble for the first time, for example, monomeric and oligomeric ellagitannins and galloylglucoses. Negative correlation was found between the amount of P. sparsa DNA and flavonol glycosides and some ellagitannins in the leaves 8 days after inoculation, suggesting a possible role for these phenolics in the defense.

  15. Three new species of Trichoderma with hyaline ascospores from China.

    Science.gov (United States)

    Zhu, Z X; Zhuang, W Y

    2015-01-01

    Collections of Trichoderma having hyaline ascospores from different areas of China were examined. Using combined analyses of morphological data, culture characters and phylogenetic information based on rDNA sequences of partial nuc translation elongation factor 1-α encoding gene (TEF1-α) and the gene encoding the second largest nuc RNA polymerase subunit (RPB2), three new species, Trichoderma applanatum, T. oligosporum and T. sinoluteum, were discovered and are described. Trichoderma applanatum produces continuous flat to pulvinate, white to cream stromata with dense orange or pale brown ostioles, and simple acremonium-like to verticillium-like conidiophores, belongs to the Hypocreanum clade and is closely related to T. decipiens. Trichoderma oligosporum forms reddish brown stromata with a downy surface, hyaline conidia and gliocladium-like conidiophores, and is closely related to but distinct from T. crystalligenum in the Psychrophila clade. Trichoderma sinoluteum, as a member of the Polysporum clade, is characterized by pale yellow stromata, white pustulate conidiomata, pachybasium-like conidiophores, and hyaline conidia. Differences between the new species and their close relatives are discussed. © 2015 by The Mycological Society of America.

  16. Videographic evidence of endangered species depredation by feral cat

    Science.gov (United States)

    Judge, Seth; Lippert, Jill S.; Misajon, Kathleen; Hu, Darcy; Hess, Steven C.

    2012-01-01

    Feral cats (Felis cafus) have long been implicated as nest predators of endangered 'Ua'u (Hawaiian Petrel; Pterodroma sandwichensis) on Hawaii Island, but until recently, visual confirmation has been limited by available technology. 'Ua'u nest out of view, deep inside small cavities, on alpine lava flows. During the breeding seasons of 2007 and 2008, we monitored known burrows within Hawai'i Volcanoes National Park. Digital infrared video cameras assisted in determining the breeding behaviour and nesting success at the most isolated of burrows. With 7 cameras, we collected a total of 819 videos and 89 still photographs of adult and nestling 'Ua'u at 14 burrows. Videos also confirmed the presence of rats (Rattus spp.) at 2 burrows, 'Ōmao (Myadestes obscurus) at 8 burrows, and feral cats at 6 burrows. A sequence of videos showed a feral cat taking a downy 'Ua'u chick from its burrow, representing the first direct evidence of 'Ua'u depredation by feral cat in Hawai'i. This technique provides greater understanding of feral cat behaviour in 'Ua'u colonies, which may assist in the development of more targeted management strategies to reduce nest predation on endangered insular bird species.

  17. Isolation and characterization of an antifungal protein from Bacillus licheniformis HS10.

    Science.gov (United States)

    Wang, Zhixin; Wang, Yunpeng; Zheng, Li; Yang, Xiaona; Liu, Hongxia; Guo, Jianhua

    2014-11-07

    Bacillus licheniformis HS10 is a good biocontrol agent against Pseudoperonospora cubensis which caused cucumber downy disease. To identify and characterize the antifungal proteins produced by B.licheniformis HS10, the proteins from HS10 were isolated by using 30-60% ammonium sulfate precipitation, and purified with column chromatography on DEAE Sepharose Fast Flow, RESOURCE Q and Sephadex G-75. And the SDS-PAGE and MALDI-TOF/TOF-MS analysis results demonstrated that the antifungal protein was a monomer with molecular weight of about 55 kDa, identified as carboxypeptidase. Our experiments also showed that the antifungal protein from B. licheniformis HS10 had significantly inhibition on eight different kinds of plant pathogenic fungi, and it was stable with good biological activity at as high as 100°C for 30 min and in pH value ranged from 6 to 10. The biological activity was negatively affected by protease K and 10mM metal cations except Ca(2+). Copyright © 2014 Elsevier Inc. All rights reserved.

  18. Construction of a genome-anchored, high-density genetic map for melon (Cucumis melo L.) and identification of Fusarium oxysporum f. sp. melonis race 1 resistance QTL.

    Science.gov (United States)

    Branham, Sandra E; Levi, Amnon; Katawczik, Melanie; Fei, Zhangjun; Wechter, W Patrick

    2018-04-01

    Four QTLs and an epistatic interaction were associated with disease severity in response to inoculation with Fusarium oxysporum f. sp. melonis race 1 in a recombinant inbred line population of melon. The USDA Cucumis melo inbred line, MR-1, harbors a wealth of alleles associated with resistance to several major diseases of melon, including powdery mildew, downy mildew, Alternaria leaf blight, and Fusarium wilt. MR-1 was crossed to an Israeli cultivar, Ananas Yok'neam, which is susceptible to all of these diseases, to generate a recombinant inbred line (RIL) population of 172 lines. In this study, the RIL population was genotyped to construct an ultra-dense genetic linkage map with 5663 binned SNPs anchored to the C. melo genome and exhibits the overall high quality of the assembly. The utility of the densely genotyped population was demonstrated through QTL mapping of a well-studied trait, resistance to Fusarium wilt caused by Fusarium oxysporum f. sp. melonis (Fom) race 1. A major QTL co-located with the previously validated resistance gene Fom-2. In addition, three minor QTLs and an epistatic interaction contributing to Fom race 1 resistance were identified. The MR-1 × AY RIL population provides a valuable resource for future QTL mapping studies and marker-assisted selection of disease resistance in melon.

  19. Influence of Cultivars and Seed Thermal Treatment on the Development of Fungal Pathogens in Carrot and Onion Plants

    Directory of Open Access Journals (Sweden)

    Martin Koudela

    2016-01-01

    Full Text Available Carrot and onion are vegetables representing an important segment of fresh market. They suffer from serious fungal diseases that can inflict great damage on crops, i.e. alternaria leaf blight, peronospora downy mildew, and botrytis neck rot. The resistance of selected carrot and onion cultivars important for the production of vegetables in the Czech Republic was tested by exposure to targeted infection by the above fungal pathogens. The exposure of eleven carrot cultivars to spores of Alternaria dauci showed that the most resistant and sensitive cultivars were Katrin, Cortina F1, Afalon F1 and Favorit, Tinga, Berlika F1, respectively. A targeted infection of onion cultivars with Botrytis aclada clustered them into three groups: Amfora F1, Bolero, Tosca, Triumf F1 (strong resistance, Avalon, Grenada (medium resistance, Alice, Karmen, Všetana (low resistance. Similar groups were distinguished also after the infection with Peronospora destructor: Avalon, Bolero, Tosca (strong resistance, Alice, Amfora F1, Grenada, Karmen, Triumf F1 (medium resistance,Všetana (low resistance. Hot water treatment of carrot seeds applied after the inoculation with A. dauci decreased the development of the infection 1.3-2.3-fold, whereas the protective effect observed with onion seeds against the infection by P. destructor and B. aclada was lower.

  20. Remediation of copper in vineyards – A mini review

    International Nuclear Information System (INIS)

    Mackie, K.A.; Müller, T.; Kandeler, E.

    2012-01-01

    Viticulturists use copper fungicide to combat Downy Mildew. Copper, a non-degradable heavy metal, can accumulate in soil or leach into water sources. Its accumulation in topsoil has impacted micro and macro organisms, spurring scientists to research in situ copper removal methods. Recent publications suggest that microorganism assisted phytoextraction, using plants and bacteria to actively extract copper, is most promising. As vineyards represent moderately polluted sites this technique has great potential. Active plant extraction and chelate assisted remediation extract too little copper or risk leaching, respectively. However, despite interesting pot experiment results using microorganism assisted phytoextraction, it remains a challenge to find plants that primarily accumulate copper in their shoots, a necessity in vineyards where whole plant removal would be time consuming and financially cumbersome. Vineyard remediation requires a holistic approach including sustainable soil management, proper plant selection, increasing biodiversity and microorganisms. - Highlights: ► We describe copper distribution and availability in vineyards. ► We explain the environmental impact of copper on organisms, plants and processes. ► We detail possible remediation methods within vineyards. ► Microbially assisted phytoremediation is the most promising remediation method. ► A solution requires an interdisciplinary approach between plants, soil and vines. - This review is significant because it highlights prospective remediation methods usable in copper contaminated vineyards.

  1. Fine mapping of the sunflower resistance locus Pl(ARG) introduced from the wild species Helianthus argophyllus.

    Science.gov (United States)

    Wieckhorst, S; Bachlava, E; Dussle, C M; Tang, S; Gao, W; Saski, C; Knapp, S J; Schön, C-C; Hahn, V; Bauer, E

    2010-11-01

    Downy mildew, caused by Plasmopara halstedii, is one of the most destructive diseases in cultivated sunflower (Helianthus annuus L.). The dominant resistance locus Pl(ARG) originates from silverleaf sunflower (H. argophyllus Torrey and Gray) and confers resistance to all known races of P. halstedii. We mapped Pl(ARG) on linkage group (LG) 1 of (cms)HA342 × ARG1575-2, a population consisting of 2,145 F(2) individuals. Further, we identified resistance gene candidates (RGCs) that cosegregated with Pl(ARG) as well as closely linked flanking markers. Markers from the target region were mapped with higher resolution in NDBLOS(sel) × KWS04, a population consisting of 2,780 F(2) individuals that does not segregate for Pl(ARG). A large-insert sunflower bacterial artificial chromosome (BAC) library was screened with overgo probes designed for markers RGC52 and RGC151, which cosegregated with Pl(ARG). Two RGC-containing BAC contigs were anchored to the Pl(ARG) region on LG 1.

  2. Fine mapping of the sunflower resistance locus PlARG introduced from the wild species Helianthus argophyllus

    Science.gov (United States)

    Wieckhorst, S.; Bachlava, E.; Dußle, C. M.; Tang, S.; Gao, W.; Saski, C.; Knapp, S. J.; Schön, C.-C.; Hahn, V.

    2010-01-01

    Downy mildew, caused by Plasmopara halstedii, is one of the most destructive diseases in cultivated sunflower (Helianthus annuus L.). The dominant resistance locus PlARG originates from silverleaf sunflower (H. argophyllus Torrey and Gray) and confers resistance to all known races of P. halstedii. We mapped PlARG on linkage group (LG) 1 of (cms)HA342 × ARG1575-2, a population consisting of 2,145 F2 individuals. Further, we identified resistance gene candidates (RGCs) that cosegregated with PlARG as well as closely linked flanking markers. Markers from the target region were mapped with higher resolution in NDBLOSsel × KWS04, a population consisting of 2,780 F2 individuals that does not segregate for PlARG. A large-insert sunflower bacterial artificial chromosome (BAC) library was screened with overgo probes designed for markers RGC52 and RGC151, which cosegregated with PlARG. Two RGC-containing BAC contigs were anchored to the PlARG region on LG 1. Electronic supplementary material The online version of this article (doi:10.1007/s00122-010-1416-4) contains supplementary material, which is available to authorized users. PMID:20700574

  3. Conversion trials in mixed coppices of Gargano (Puglia, Italy: first results

    Directory of Open Access Journals (Sweden)

    2009-03-01

    Full Text Available Six plots have been drawn in an mixed aged coppice stand, 40 years after last coppicing; they represent a typical expression of Doronico-Carpinetum phytosociological association and they are characteristic of many woods of Gargano’s territory, composed by Quercus cerris L. (turkey oak, Quercus pubescens Willd. (downy oak, Acer opalus Mill. (italian maple, Carpinus betulus L. (european hornbeam, Ostrya carpinifolia Scop. (hop hornbeam. Compared treatments are: natural evolution of the coppice without thinning versus two thinning regimes with different intensity, both aimed to convert the stands into high forests. 1200 and 1600 stems per hectare were released in the conversion plots. Plots, control and treated in 2001, have been measured before and immediately after thinning and remeasured five years later. At the present time, stands are characterized by a basically monolayered structure, in which turkey oak is prevalent in term of basal area. Moreover in thinned areas, losses on the released shoots number are unimportant both in absolute and in percent terms; in control plot, instead, competition by plants of upper storey on the dominated ones means high values of mortality.

  4. Assessment of pest and pesticide trends in vegetable crops in united arab emirates and sultanate of oman

    International Nuclear Information System (INIS)

    Waakeh, W.; Aldahmani, J.H.; Deadman, M.L.; Saadi, A.A.

    2007-01-01

    A preliminary survey on pesticide uses in 40 vegetable-growing farms representing different agricultural areas in Oman and the UAE, twenty farms from each country, revealed that all the vegetable farms used pesticides for crop protection. Among the major insect-pests, white flies (Bemisia tabaci), leafminers (Liriomyza trifolii), melon fruit flies (Bactrocera ciliatus), aphids (Aphis spp.) and tobacco leafworm (Spodoptera litteralis) were recorded in Omani farms. In the UAE, white flies, leafminers, cutworms (Agrotis ypsilan), tomato fruitworms (Helicoverpa armigera) and eggplant fruitworms (Leucinodes orbonalis) were the 5 top insect-pests. Among the plant diseases, powdery mildew (Erysiphe spp.), blight (Alternaria spp.), damping off (Pythium spp.), leafspot (Alternaria spp.) and mosaic (CMV) Were major cause of vegetable diseases in Omani farms; whereas, damping off (Pythium aphanidermatum), downy mildew (Pseudoperonspora cubensis), early blight (Alternaria solani), septoria leaf spot (Septoria lycopersici) and anthracnose rip rot (colletotrichum spp.) were the most predominant diseases encountered in most UAE farms. Among the most commonly used pesticides, 29 insecticides, 16 fungicides and 3 herbicides were used by the vegetable farmers. Around 55% of Omani farms used routine application of pesticides, irrespective of the pest presence. Whereas, in the UAE, most farmers started to spray pesticides at 6-20% pest (insect, disease and weeds) infection. Over 65 of the farms, in both the countries, received chemical pest management information from the sales representatives. (author)

  5. Sulforaphane Modifies Histone H3, Unpacks Chromatin, and Primes Defense.

    Science.gov (United States)

    Schillheim, Britta; Jansen, Irina; Baum, Stephani; Beesley, Alexander; Bolm, Carsten; Conrath, Uwe

    2018-03-01

    Modern crop production calls for agrochemicals that prime plants for enhanced defense. Reliable test systems for spotting priming-inducing chemistry, however, are rare. We developed an assay for the high-throughput search for compounds that prime microbial pattern-induced secretion of antimicrobial furanocoumarins (phytoalexins) in cultured parsley cells. The screen produced 1-isothiocyanato-4-methylsulfinylbutane (sulforaphane; SFN), a secondary metabolite in many crucifers, as a novel defense priming compound. While elucidating SFN's mode of action in defense priming, we found that in Arabidopsis ( Arabidopsis thaliana ) the isothiocyanate provokes covalent modification (K4me3, K9ac) of histone H3 in the promoter and promoter-proximal region of defense genes WRKY6 and PDF1 2 , but not PR1 SFN-triggered H3K4me3 and H3K9ac coincide with chromatin unpacking in the WRKY6 and PDF1 2 regulatory regions, primed WRKY6 expression, unprimed PDF1 2 activation, and reduced susceptibility to downy mildew disease ( Hyaloperonospora arabidopsidis ). Because SFN also directly inhibits H arabidopsidis and other plant pathogens, the isothiocyanate is promising for the development of a plant protectant with a dual mode of action. © 2018 American Society of Plant Biologists. All Rights Reserved.

  6. Combating plant diseases--the Darwin connection.

    Science.gov (United States)

    Hollomon, Derek W; Brent, Keith J

    2009-11-01

    Although Darwin knew of plant diseases, he did not study them as part of his analysis of natural selection. Effective plant disease control has only been developed after his death. This article explores the relevance of Darwin's ideas to three problem areas with respect to diseases caused by fungi: emergence of new diseases, loss of disease resistance bred into plants and development of fungicide resistance. Darwin's concept of change through natural or artificial selection relied on selection of many small changes, but subsequent genetic research has shown that change can also occur through large steps. Appearance of new diseases can involve gene duplication, transfer or recombination, but all evidence points to both host plant resistance and fungicide susceptibility being overcome through point mutations. Because the population size of diseases such as rusts and powdery and downy mildews is so large, all possible point mutations are likely to occur daily, even during moderate epidemics. Overcoming control measures therefore reflects the overall fitness of these mutants, and much resource effort is being directed towards assessment of their fitness, both in the presence and in the absence of selection. While recent developments in comparative genomics have caused some revision of Darwin's ideas, experience in managing plant disease control measures clearly demonstrates the relevance of concepts he introduced 150 years ago. It also reveals the remarkable speed and the practical impact of adaptation in wild microorganism populations to changes in their environment, and the difficulty of stopping or delaying such adaptation. (c) 2009 Society of Chemical Industry.

  7. Long-term experience with sodium chondroitin sulfate in patients with painful bladder syndrome.

    Science.gov (United States)

    Tornero, J I; Olarte, H; Escudero, F; Gómez, G

    2013-09-01

    To assess the response of patients diagnosed with painful bladder syndrome to treatment with instillations of sodium chondroitin sulfate. We present a series of cases of patients with painful bladder syndrome who followed a bladder instillation protocol with sodium chondroitin sulfate, according to our centre's regimen. The response to treatment was assessed with respect to pain, according to the Downie scale; urinary frequency, according to the voiding diary; and subjective improvement, according to the Patient Global Impression of Improvement (PGI-I) scale. A total of 28 patients with a median age of 59 years (range 22-90) followed this protocol. From the medical histories, 19.4% had suffered an infection of the urinary tract, 3.8% had suffered urinary tuberculosis, 7.6% received pelvic radiation therapy and 26.9% had taken anticholinergic drugs for overactive bladder syndrome. We evaluated the response to treatment at 0, 3, 6 and 12 months and found that at the end of treatment 72.3% of the patients had improved bladder pain and 75% were significantly better. Treatment with sodium chondroitin sulfate through endovesical instillation in painful bladder syndrome improves pain, voiding frequency and quality of life in the long term. Copyright © 2013 AEU. Published by Elsevier Espana. All rights reserved.

  8. Evaluation of a New Temporary Immersion Bioreactor System for Micropropagation of Cultivars of Eucalyptus, Birch and Fir

    Directory of Open Access Journals (Sweden)

    Edward Businge

    2017-06-01

    Full Text Available The use of liquid instead of solid culture medium for the micropropagation of plants offers advantages such as better access to medium components and scalability through possible automation of the processes. The objective of this work was to compare a new temporary immersion bioreactor (TIB to solid medium culture for the micropropagation of a selection of tree species micropropagated for commercial use: Nordmann fir (Abies nordmanniana (Steven Spach, Eucalyptus (E. grandis x E. urophylla, Downy birch (Betula pubescens Ehrh, and Curly birch (Betula pendula var. carelica. Cultivation of explants in the TIB resulted in a significant increase of multiplication rate and fresh weight of Eucalyptus and B. pendula, but not Betula pubescens. In addition, the fresh weight of embryogenic tissue and the maturation frequency of somatic embryos increased significantly when an embryogenic cell line of A. nordmanniana was cultivated in the TIB compared to solid culture medium. These results demonstrate the potential for scaling up and automating micropropagation by shoot multiplication and somatic embryogenesis in commercial tree species using a temporary immersion bioreactor.

  9. Inter- and intra-specific responses to elevated ozone and chamber climate in northern birches.

    Science.gov (United States)

    Manninen, S; Huttunen, S; Vanhatalo, M; Pakonen, T; Hämäläinen, A

    2009-05-01

    We studied the responses of micropropagated, northern provenances of downy, mountain and silver birches to elevated ozone (O(3)) and changing climate using open-top chambers (OTCs). Contrary to our hypothesis, northern birches were sensitive to O(3), i.e. O(3) levels of 31-36 ppb reduced the leaf and root biomasses by -10%, whereas wood biomass was affected to a lesser extent. The warmer and drier OTC climate enhanced growth in general, though there were differences among the species and clones, e.g. in bud burst and biomass production. Inter- and intra-specific responses to O(3) and changing climate relate to traits such as allocation patterns between the above- and belowground parts (i.e. root/shoot ratio), which further relate to nutrient and water economy. Our experiments may have mimicked future conditions quite well, but only long-term field studies can yield the information needed to forecast responses at both tree and ecosystem levels.

  10. A Framework for Optimizing Phytosanitary Thresholds in Seed Systems.

    Science.gov (United States)

    Choudhury, Robin Alan; Garrett, Karen A; Klosterman, Steven J; Subbarao, Krishna V; McRoberts, Neil

    2017-10-01

    Seedborne pathogens and pests limit production in many agricultural systems. Quarantine programs help prevent the introduction of exotic pathogens into a country, but few regulations directly apply to reducing the reintroduction and spread of endemic pathogens. Use of phytosanitary thresholds helps limit the movement of pathogen inoculum through seed, but the costs associated with rejected seed lots can be prohibitive for voluntary implementation of phytosanitary thresholds. In this paper, we outline a framework to optimize thresholds for seedborne pathogens, balancing the cost of rejected seed lots and benefit of reduced inoculum levels. The method requires relatively small amounts of data, and the accuracy and robustness of the analysis improves over time as data accumulate from seed testing. We demonstrate the method first and illustrate it with a case study of seedborne oospores of Peronospora effusa, the causal agent of spinach downy mildew. A seed lot threshold of 0.23 oospores per seed could reduce the overall number of oospores entering the production system by 90% while removing 8% of seed lots destined for distribution. Alternative mitigation strategies may result in lower economic losses to seed producers, but have uncertain efficacy. We discuss future challenges and prospects for implementing this approach.

  11. Agronomic Evaluation of Bunching Onion in the Colombian Cundiboyacense High Plateau

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    Carlos H. Galeano Mendoza

    2018-01-01

    Full Text Available Bunching onion (Allium fistulosum L. is a strategic crop for Colombia due to its economic relevance within fresh and processed food markets, and therefore, there is a demand for high yielding genotypes adapted to specific regions. For this reason, after carrying out a clonal selection process including 62 genotypes, ten of these, including a regional control, were evaluated for six different traits in Boyacá (Colombia during 2012 and 2013. These traits were grouped into agronomic, yield, and processing categories. In general, these showed significant differences (p≤0.01 for genotypes, location, and genotypes × location interaction. Compared with the regional control and based on the multienvironmental analysis the genotypes Clone 30 and Clone 38 were the most promising new cultivars identified in this study. These two clones showed comparative advantages on earliness and yield, and they moreover showed some level of resistance to downy mildew and root rot, the most limiting diseases for Boyacá’s bunch onion farmers. Therefore, Clone 30 and Clone 38 were registered as new bunching onion cultivars for the Cundiboyacense High Plateau region under the names Corpoica Aquitania-1 and Corpoica Tota-1, respectively. Finally, further approaches and initiatives on bunching onion breeding are discussed.

  12. Columbia River Wildlife Mitigation Habitat Evaluation Procedures Report / Scotch Creek Wildlife Area, Berg Brothers, and Douglas County Pygmy Rabbit Projects.

    Energy Technology Data Exchange (ETDEWEB)

    Ashley, Paul R.

    1997-01-01

    This Habitat Evaluation Procedure study was conducted to determine baseline habitat units (HUs) on the Scotch Creek, Mineral Hill, Pogue Mountain, Chesaw and Tunk Valley Habitat Areas (collectively known as the Scotch Creek Wildlife Area) in Okanogan County, Sagebrush Flat and the Dormaler property in Douglas County, and the Berg Brothers ranch located in Okanogan County within the Colville Reservation. A HEP team comprised of individuals from the Washington Department of Fish and Wildlife, the Confederated Tribes of the Colville Reservation, and the Natural Resources Conservation Service (Appendix A) conducted baseline habitat surveys using the following HEP evaluation species: mule deer (Odocoileus hemionus), sharp-tailed grouse (Tympanuchus phasianellus), pygmy rabbit (Brachylagus idahoensis), white-tailed deer (Odocoileus virginiana), mink (Mustela vison), Canada goose (Branta canadensis), downy woodpecker (Picoides pubescens), Lewis woodpecker (Melanerpes lewis), and Yellow warbler (Dendroica petechia). Results of the HEP analysis are listed below. General ratings (poor, marginal, fair, etc.,) are described in Appendix B. Mule deer habitat was marginal lacking diversity and quantify of suitable browse species. Sharp-tailed grouse habitat was marginal lacking residual nesting cover and suitable winter habitat Pygmy rabbit habitat was in fair condition except for the Dormaier property which was rated marginal due to excessive shrub canopy closure at some sites. This report is an analysis of baseline habitat conditions on mitigation project lands and provides estimated habitat units for mitigation crediting purposes. In addition, information from this document could be used by wildlife habitat managers to develop management strategies for specific project sites.

  13. Water relations, stomatal response and transpiration of Quercus pubescens trees during summer in a Mediterranean carbon dioxide spring

    Energy Technology Data Exchange (ETDEWEB)

    Tognetti, R.; Miglietta, F.; Raschi, A. [Consiglio Nazionale della Ricerche, Firenze (Italy); Longobucco, A. [Centro Studi per l`Informatica applicata all`Agricoltura, Firenze (Italy)

    1999-04-01

    Variations in water relations and stomatal response of downy oak (Quercus pubescens) were analyzed under Mediterranean field conditions during two consecutive summers at two locations characterized by different atmospheric CO{sub 2} concentrations due to the presence of a CO{sub 2} spring at one of the locations. The heat-pulse velocity technique was used to estimate water use during a five-month period from June to November 1994. At the end of the sap flow measurements, the trees were harvested and foliage and sapwood area measured. The effect of elevated CO{sub 2} concentration on leaf conductance was less at high leaf-to-air water vapour pressure difference than at low leaf-to-air water vapour pressure difference. Mean and diurnal sap fluxes were consistently higher in trees at the control site than in the trees at the CO{sub 2} spring site. Results are discussed in terms of effects of elevated CO{sub 2} concentration on plant water use at the organ and whole-tree level. 76 refs., 9 figs.

  14. Arboreal ants use the "Velcro(R principle" to capture very large prey.

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    Alain Dejean

    2010-06-01

    Full Text Available Plant-ants live in a mutualistic association with host plants known as "myrmecophytes" that provide them with a nesting place and sometimes with extra-floral nectar (EFN and/or food bodies (FBs; the ants can also attend sap-sucking Hemiptera for their honeydew. In return, plant-ants, like most other arboreal ants, protect their host plants from defoliators. To satisfy their nitrogen requirements, however, some have optimized their ability to capture prey in the restricted environment represented by the crowns of trees by using elaborate hunting techniques. In this study, we investigated the predatory behavior of the ant Azteca andreae which is associated with the myrmecophyte Cecropia obtusa. We noted that up to 8350 ant workers per tree hide side-by-side beneath the leaf margins of their host plant with their mandibles open, waiting for insects to alight. The latter are immediately seized by their extremities, and then spread-eagled; nestmates are recruited to help stretch, carve up and transport prey. This group ambush hunting technique is particularly effective when the underside of the leaves is downy, as is the case for C. obtusa. In this case, the hook-shaped claws of the A. andreae workers and the velvet-like structure of the underside of the leaves combine to act like natural Velcro that is reinforced by the group ambush strategy of the workers, allowing them to capture prey of up to 13,350 times the mean weight of a single worker.

  15. Sesquiterpene volatile organic compounds (VOCs are markers of elicitation by sulfated laminarine in grapevine

    Directory of Open Access Journals (Sweden)

    Malik eChalal

    2015-05-01

    Full Text Available Inducing resistance in plants by application of elicitors of defense reactions is an attractive plant protection strategy, especially for grapevine (Vitis vinifera which is susceptible to severe fungal diseases. Though induced resistance (IR can be successful in controlled conditions, under outdoor conditions IR is in most cases not effective enough for practical disease control. Progress in the application of IR requires a better understanding of grapevine defense mechanisms and the ability to monitor defense markers in order to identify factors (physiological, environmental… that can impact IR in the vineyard.Volatile organic compounds (VOCs are well-known plant defenses compounds that have only received little or no attention in the case of grape-pathogen interactions to date. This prompted us to investigate whether an elicitor, the sulfated laminarin (PS3, actually induces the production of VOCs in grapevine. Online analysis (PTR-QMS of VOC emissions in dynamic cuvettes and passive sampling in gas tight bags with solid phase micro extraction (SPME-GC-MS under greenhouse conditions showed that PS3 elicited emission of VOCs. Some of them (as (E,E-α-farnesene might be good candidates as biomarkers of elicitor-IR whereas methyl salicylate appears to be rather a biomarker of downy mildew infection. A negative correlation between VOC emission and disease severity suggests a positive role of VOCs in grape defense against diseases.

  16. Using Image Texture and Spectral Reflectance Analysis to Detect Yellowness and Esca in Grapevines at Leaf-Level

    Directory of Open Access Journals (Sweden)

    Hania Al-Saddik

    2018-04-01

    Full Text Available Plant diseases are one of the main reasons behind major economic and production losses in the agricultural field. Current research activities enable large fields monitoring and plant disease detection using innovative and robust technologies. French grapevines have a reputation for producing premium quality wines, however, these major fruit crops are susceptible to many diseases, including Esca, Downy mildew, Powdery mildew, Yellowing, and many others. In this study, we focused on two main infections (Esca and Yellowing, and data were gathered from fields that were located in Aquitaine and Burgundy regions, France. Since plant diseases can be diagnosed from the properties of the leaf, we acquired both Red-Green-Blue (RGB digital image and hyperspectral reflectance data from infected and healthy leaves. Biophysical parameters that were produced by the PROSPECT model inversion together with texture parameters compiled from the literature were deduced. Then we investigated their relationship to damage caused by Yellowing and Esca. This study examined whether spectral and textural data can identify the two diseases through the use of Neural Networks. We obtained an overall accuracy of 99% for both of the diseases when textural and spectral data are combined. These results suggest that, first, biophysical parameters present a valid dimension reduction tool that could replace the use of complete hyperspectral data. Second, remote sensing using spectral reflectance and digital images can make an overall nondestructive, rapid, cost-effective, and reproducible technique to determine diseases in grapevines with a good level of accuracy.

  17. Quantitative determination on heavy metals in different stages of wine production by Total Reflection X-ray Fluorescence and Energy Dispersive X-ray Fluorescence: Comparison on two vineyards

    International Nuclear Information System (INIS)

    Pessanha, Sofia; Carvalho, Maria Luisa; Becker, Maria; Bohlen, Alex von

    2010-01-01

    The purpose of this study is to determine the elemental content, namely heavy metals, of samples of vine-leaves, grapes must and wine. In order to assess the influence of the vineyard age on the elemental content throughout the several stages of wine production, elemental determinations of trace elements were made on products obtained from two vineyards aged 6 and 14 years from Douro region. The elemental content of vine-leaves and grapes was determined by Energy Dispersive X-Ray Fluorescence (EDXRF), while analysis of the must and wine was performed by Total Reflection X-ray Fluorescence (TXRF). Almost all elements present in wine and must samples did not exceed the recommended values found in literature for wine. Bromine was present in the 6 years old wine in a concentration 1 order of magnitude greater than what is usually detected. The Cu content in vine-leaves from the older vineyard was found to be extremely high probably due to excessive use of Cu-based fungicides to control vine downy mildew. Higher Cu content was also detected in grapes although not so pronounced. Concerning the wine a slightly higher level was detected on the older vineyard, even so not exceeding the recommended value.

  18. An emerging crisis across northern prairie refuges: Prevalence of invasive plants and a plan for adaptive management

    Science.gov (United States)

    Grant, T.A.; Flanders-Wanner, B.; Shaffer, T.L.; Murphy, R.K.; Knutsen, G.A.

    2009-01-01

    In the northern Great Plains, native prairies managed by the U.S. Fish and Wildlife Service (Service) can be pivotal in conservation of North America's biological diversity. From 2002 to 2006, we surveyed 7,338 belt transects to assess the general composition of mixed-grass and tallgrass prairie vegetation across five "complexes" (i.e., administrative groupings) of national wildlife refuges managed by the Service in North Dakota and South Dakota. Native grasses and forbs were common (mean frequency of occurrence 47%-54%) on two complexes but uncommon (4%-13%) on two others. Conversely, an introduced species of grass, smooth brome (Bromus inermis), accounted for 45% to 49% of vegetation on two complexes and another species, Kentucky bluegrass (Poa pratensis) accounted for 27% to 36% of the vegetation on three of the complexes. Our data confirm prior suspicions of widespread invasion by introduced species of plants on Service-owned tracts of native prairie, changes that likely stem in part from a common management history of little or no disturbance (e.g., defoliation by grazing or fire). However, variability in the degree and type of invasion among prairie tracts suggests that knowledge of underlying causes (e.g., edaphic or climatic factors, management histories) could help managers more effectively restore prairies. We describe an adaptive management approach to acquire such knowledge while progressing with restoration. More specifically, we propose to use data from inventories of plant communities on Service-owned prairies to design and implement, as experiments, optimal restoration strategies. We will then monitor these experiments and use the results to refine future strategies. This comprehensive, process-oriented approach should yield reliable and robust recommendations for restoration and maintenance of native prairies in the northern Great Plains. 2009 by the Board of Regents of the University of Wisconsin System.

  19. Overland Transport of Rotavirus and the Effect of Soil Type and Vegetation

    Directory of Open Access Journals (Sweden)

    Paul C. Davidson

    2016-03-01

    Full Text Available Soil and vegetation are two critical factors for controlling the overland transport kinetics of pathogens in a natural environment. With livestock operations moving more towards concentrated animal operations, the need to dispose of a very large amount of manure in a localized area is becoming increasingly important. Animal manure contains a substantial amount of microbial pathogens, including rotavirus, which may pose a threat of contamination of water resources. This study examined the kinetics of rotavirus in overland transport, with an overall objective of optimizing the design of best management practices, especially vegetative filter strips. The overland transport of rotavirus was studied using three soil types (Catlin silt-loam, Darwin silty-clay, Alvin fine sandy-loam, spanning the entire spectrum of typical Illinois soil textures. A 20-min rainfall event was produced using a small-scale (1.07 m × 0.66 m laboratory rainfall simulator over a soil box measuring 0.610 m × 0.305 m. Each soil type was tested for rotavirus transport kinetics with bare surface conditions, as well as with Smooth Brome and Fescue vegetative covers. Surface runoff, near-surface runoff, soil cores, and vegetation were each analyzed for infective rotavirus particles using cell-culture infectivity assays. Results show that vegetation reduces the recovery of infective rotavirus particles in surface runoff by an average of 73%, in addition to delaying the time to peak recovery. The vegetation, in general, appeared to decrease the recovery of infective rotavirus particles in surface runoff by impeding surface flow and increasing the potential for infiltration into the soil profile.

  20. Carbon balances during land conversion in early bioenergy systems

    Science.gov (United States)

    Zenone, T.; Chen, J.; Gelfand, I.; Robertson, G. P.; Hamilton, S. K.

    2012-12-01

    In this study, we established a field experiment and deployed seven eddy-covariance towers to quantify the roles of land use change and the subsequent carbon (C) balances of three different bioenergy systems (corn, switchgrass, and mixed prairie species) that were developed from two historical land use types: monocultural grasslands dominated by smooth brome (Bromus inermis Leyss) and lands in the Conservation Reserve Program (CRP). Three CRP fields and three cropland fields were converted to soybean in 2009 (conversion year) before establishing the cellulosic biofuel cropping systems in 2010 (establishment year). A CRP perennial grassland site was kept undisturbed as a reference. Conversion of CRP to soybean induced net C emissions during the conversion year (134 -262 g C m-2 yr-1), while in the same year the net C balance at the CRP grassland reference was -35 g C m-2 yr-1 (i.e., net C sequestration). The establishment of switchgrass and mixed prairie induced a cumulative C balance of -113 g C m-2 (switchgrass from CRP), 250 g C m-2 (switchgrass from cropland), 706 g C m-2 (mixed prairie from CRP), and 59 g C m-2 (mixed prairie from cropland) over the three-year study period. The cumulative three-year C balance of corn converted from CRP and from cropland was -151 g C m-2 and -183 g C m-2, respectively. Eddy flux measurements during cellulosic biofuel crop establishment reveal annual changes in C balance that cannot be detected using conventional mass balance approaches. When end-use of harvested biomass was considered, the C balances for all studied systems, except the reference site, exhibited large C emissions ranging from 150 to 990 g C m-2 over the three-year conversion phase.

  1. Systematic identification of novel, essential host genes affecting bromovirus RNA replication.

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    Brandi L Gancarz

    Full Text Available Positive-strand RNA virus replication involves viral proteins and cellular proteins at nearly every replication step. Brome mosaic virus (BMV is a well-established model for dissecting virus-host interactions and is one of very few viruses whose RNA replication, gene expression and encapsidation have been reproduced in the yeast Saccharomyces cerevisiae. Previously, our laboratory identified ∼100 non-essential host genes whose loss inhibited or enhanced BMV replication at least 3-fold. However, our isolation of additional BMV-modulating host genes by classical genetics and other results underscore that genes essential for cell growth also contribute to BMV RNA replication at a frequency that may be greater than that of non-essential genes. To systematically identify novel, essential host genes affecting BMV RNA replication, we tested a collection of ∼900 yeast strains, each with a single essential gene promoter replaced by a doxycycline-repressible promoter, allowing repression of gene expression by adding doxycycline to the growth medium. Using this strain array of ∼81% of essential yeast genes, we identified 24 essential host genes whose depleted expression reproducibly inhibited or enhanced BMV RNA replication. Relevant host genes are involved in ribosome biosynthesis, cell cycle regulation and protein homeostasis, among other cellular processes. BMV 2a(Pol levels were significantly increased in strains depleted for a heat shock protein (HSF1 or proteasome components (PRE1 and RPT6, suggesting these genes may affect BMV RNA replication by directly or indirectly modulating 2a(Pol localization, post-translational modification or interacting partners. Investigating the diverse functions of these newly identified essential host genes should advance our understanding of BMV-host interactions and normal cellular pathways, and suggest new modes of virus control.

  2. Belowground Water Dynamics Under Contrasting Annual and Perennial Plant Communities in an Agriculturally-Dominated Landscape

    Science.gov (United States)

    Mora, G.; Asbjornsen, H.; Helmers, M. J.; Shepherd, G. W.

    2005-12-01

    The conversion from grasslands and forests to row-crops in the Midwest has affected soil water cycling because plant characteristics are one of the main parameters determining soil storage capacity, infiltration rates, and surface runoff. Little is known, however, about the extent of modification of soil water dynamics under different plant communities. To address this important issue, we are documenting soil water dynamics under contrasting perennial and annual plant communities in an agriculturally-dominated landscape. Measurements of soil moisture and depths of uptake of source water were obtained for six vegetative cover types (corn and soybean field, brome pasture, degraded savanna, restored savanna, and restored prairie) at the Neal Smith National Wildlife Refuge in Prairie City, Iowa. The depths of uptake of soil water were determined on the basis of oxygen isotope composition of soil water and stem water. Measurements were performed once a month during an entire growing season. Preliminary results indicate that soil water present under the different vegetation types show similar profiles with depth during the dry months. Soil water in the upper 5 cm is enriched in oxygen-18 by about 5 per mil relative to soil water at 100 cm. Our preliminary results also indicate that the isotopic composition of stem water from annual plants is typically higher by about 2 per mil relative to that of stem water from perennial plants during the dry period. Whereas the oxygen isotopic composition for corn stem water is -5.49 per mil, that for elm and oak stem water is -7.62 and -7.51 per mil, respectively. The higher isotope values for corn suggest that annual crop plants are withdrawing water from shallower soil horizons relative to perennial plants. Moreover, our preliminary data suggest lower moisture content in soil under annual plant cover. We propose that the presence of deeper roots in the perennial vegetation allows these plants to tap into deeper water sources when

  3. Soil modification by invasive plants: Effects on native and invasive species of mixed-grass prairies

    Science.gov (United States)

    Jordan, N.R.; Larson, D.L.; Huerd, S.C.

    2008-01-01

    Invasive plants are capable of modifying attributes of soil to facilitate further invasion by conspecifics and other invasive species. We assessed this capability in three important plant invaders of grasslands in the Great Plains region of North America: leafy spurge (Euphorbia esula), smooth brome (Bromus inermis) and crested wheatgrass (Agropyron cristatum). In a glasshouse, these three invasives or a group of native species were grown separately through three cycles of growth and soil conditioning in both steam-pasteurized and non-pasteurized soils, after which we assessed seedling growth in these soils. Two of the three invasive species, Bromus and Agropyron, exhibited significant self-facilitation via soil modification. Bromus and Agropyron also had significant facilitative effects on other invasives via soil modification, while Euphorbia had significant antagonistic effects on the other invasives. Both Agropyron and Euphorbia consistently suppressed growth of two of three native forbs, while three native grasses were generally less affected. Almost all intra- and interspecific effects of invasive soil conditioning were dependent upon presence of soil biota from field sites where these species were successful invaders. Overall, these results suggest that that invasive modification of soil microbiota can facilitate plant invasion directly or via 'cross-facilitation' of other invasive species, and moreover has potential to impede restoration of native communities after removal of an invasive species. However, certain native species that are relatively insensitive to altered soil biota (as we observed in the case of the forb Linum lewisii and the native grasses), may be valuable as 'nurse'species in restoration efforts. ?? 2007 Springer Science+Business Media B.V.

  4. Applications of atomic force microscopy to the studies of biomaterials in biomolecular systems

    Science.gov (United States)

    Ma, Xiang

    Atomic force microscopy (AFM) is a unique tool for the studies of nanoscale structures and interactions. In this dissertation, I applied AFM to study transitions among multiple states of biomaterials in three different microscopic biomolecular systems: MukB-dependent DNA condensation, holdfast adhesion, and virus elasticity. To elucidate the mechanism of MukB-dependent DNA condensation, I have studied the conformational changes of MukB proteins as indicators for the strength of interactions between MukB, DNA and other molecular factors, such as magnesium and ParC proteins, using high-resolution AFM imaging. To determine the physical origins of holdfast adhesion, I have investigated the dynamics of adhesive force development of the holdfast, employing AFM force spectroscopy. By measuring rupture forces between the holdfast and the substrate, I showed that the holdfast adhesion is strongly time-dependent and involves transformations at multiple time scales. Understanding the mechanisms of adhesion force development of the holdfast will be critical for future engineering of holdfasts properties for various applications. Finally, I have examined the elasticity of self-assembled hepatitis B virus-like particles (HBV VLPs) and brome mosaic virus (BMV) in response to changes of pH and salinity, using AFM nanoindentation. The distributions of elasticity were mapped on a single particle level and compared between empty, RNA- and gold-filled HBV VLPs. I found that a single HBV VLP showed heterogeneous distribution of elasticity and a two-step buckling transition, suggesting a discrete property of HBV capsids. For BMV, I have showed that viruses containing different RNA molecules can be distinguished by mechanical measurements, while they are indistinguishable by morphology. I also studied the effect of pH on the elastic behaviors of three-particle BMV and R3/4 BMV. This study can yield insights into RNA presentation/release mechanisms, and could help us to design novel drug

  5. Status and management of non-native plant invasion in three of the largest national parks in the United States

    Directory of Open Access Journals (Sweden)

    Scott Abella

    2015-06-01

    Full Text Available Globally, invasion by non-native plants threatens resources that nature reserves are designated to protect. We assessed the status of non-native plant invasion on 1,662, 0.1-ha plots in Death Valley National Park, Mojave National Preserve, and Lake Mead National Recreation Area. These parks comprise 2.5 million ha, 23% of the national park land in the contiguous USA. At least one non-native species inhabited 82% of plots. Thirty-one percent of plots contained one non-native species, 30% two, 17% three, and 4% four to ten non-native species. Red brome (Bromus rubens, an ‘ecosystem engineer’ that alters fire regimes, was most widespread, infesting 60% of plots. By identifying frequency of species through this assessment, early detection and treatment can target infrequent species or minimally invaded sites, while containment strategies could focus on established invaders. We further compared two existing systems for prioritizing species for management and found that a third of species on plots had no rankings available. Moreover, rankings did not always agree between ranking systems for species that were ranked. Presence of multiple non-native species complicates treatment, and while we found that 40% of plots contained both forb and grass invaders, exploiting accelerated phenology of non-natives (compared to native annuals might help manage multi-species invasions. Large sizes of these parks and scale of invasion are formidable challenges for management. Yet, precisely because of their size, these reserves represent opportunities to conserve large landscapes of native species by managing non-native plant invasions.

  6. The Longevity of Crop Seeds Stored Under Long-term Condition in the National Gene Bank of Bulgaria

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    Desheva Gergana

    2016-10-01

    Full Text Available Seed accessions from 7 plant families and 28 species stored for above 20 years in the National gene bank of Bulgaria were evaluated. All seed accessions were maintained as base collection under long-term storage conditions with low moisture contents (5±2% in hermetically closed containers at −18°C. On the basis of experimental data, the seed storage characters σ (standard deviation of seed death in storage, P50% (the time for viability to fall to 50% and P10% (the time for viability reduction of 10% were determined allowing the prediction of seed storage life and the regeneration needs. The results showed significant differences in loss of seed viability among species and within the species. After 20–24 years of storage, eleven crops showed minimal viability decline under 5% as compared to the initial viability (oats, barley, maize, bread wheat, durum wheat, smooth brome grass, faba bean, chickpea, sunflower, cucumber and pepper. For the same storage time, another group of crops (sorghum, triticale, orchard grass, tall fescue, common vetch, grass pea, lentil, common bean, rapeseed, tobacco, flax, cabbage and tomatoes presented 5–10% reduction of seed viability. More significant changes in seed viability – above 10% – were detected for peanuts, lettuce, soybean and rye. The σ values varied from 20.41 years (Arachis hypogaea L. to 500 years (for Avena sativa L. and Triticum aestivum L. There was wide variation across species, both in time taken for the viability to fall to 50% and in time taken for the seed viability reduction of 10%. The study illustrates the positive effect of both seed storability early monitoring and prediction of regeneration needs as a tool for limiting undesired losses.

  7. Los primeros objetos de bronce en el occidente de Europa

    Directory of Open Access Journals (Sweden)

    Fernández-Miranda, Manuel

    1995-06-01

    Full Text Available The alloy of copper with tin is used to show cultural relations and exchanges between Bronze Age cultures in western and central Europe. At the beginning, the distribution and location of tin resources explains the variations in bronze composition, but interregional ex-change leads later to a more homogeneous alloy. During the Early Bronze Age the Iberian Peninsula was not connected to the exchange networks of western Europe, and the first true bronzes appear at least two centuries la ter. The tin alloy spread over Iberia from north to south, and arrive to South-east at the end of the Middle Brome Age, due to the isolation of this region.

    A través del uso de la aleación de cobre y estaño en la tecnología metalúrgica de la Edad del Bronce europea se analizan las relaciones culturales e intercambios que tienen lugar entre los diversos grupos culturales. Al principio la disponibilidad de recursos minerales de estaño condicionó la composición de la aleación, pero más tarde el establecimiento de relaciones comerciales condujo a una mayor homogeneización en la producción. La Península Ibérica aparece durante el Bronce Antiguo desconectada de las interacciones actuantes en el Occidente de Europa, acusando un retraso en el conocimiento del bronce de al menos dos siglos. La difusión de la aleación se produce de norte a sur, llegando al Sureste a fines del Bronce Medio como consecuencia de su aislamiento.

  8. Composes inter-halogenes sous pression: etude des transformations structurales dans le monobromure d'iode sous forme dense

    Science.gov (United States)

    Bouchard, Alexandre

    La famille des composes halogenes et inter-halogenes representent des solides moleculaires adoptant des phases denses communes avec des solides moleculaires diatomiques comme l'azote et l'hydrogene. Parmi les transformations structurales et electroniques induites sous haute pression et observees dans ces solides, on note, entre autres, la dissociation moleculaire et la metallisation. De plus, l'etude des phases denses de l'iode a permis recemment l'observation d'une structure cristalline possedant une modulation dite incommensurable, c'est-a-dire une modulation possedant une periodicite differente de celle de la structure cristalline, jetant ainsi une lumiere nouvelle sur le processus de dissociation moleculaire dans les solides halogenes. Dans ce memoire, on propose d'etudier les changements structuraux dans monobromure d'iode (IBr), un compose inter-halogene possedant des proprietes structurales semblables a celles de deux composes halogenes, soit l'iode (I 2) et le brome (Br2) sous leur forme solide. Des experiences de diffraction des rayons X de poudres en utilisant un rayonnement synchrotron ont ete realisees a temperature ambiante sur l'IBr en variant la pression jusqu'aux environs de 60 GPa. La nature chimique particuliere du compose IBr a necessite la mise au point de techniques de chargement d'echantillon destinees a preserver l'integrite chimique de la substance utilisee. On rapporte egalement l'observation d'une phase de l'IBr presentant une modulation incommensurable. Les phases observees dans l'IBr permettent d'etablir des paralleles avec les phases denses rapportees dans I2 et Br2 par le biais d'un modele phenomenologique decrivant la sequence structurale des solides halogenes sous forme condensee.

  9. The molecular variability analysis of the RNA 3 of fifteen isolates of Prunus necrotic ringspot virus sheds light on the minimal requirements for the synthesis of its subgenomic RNA.

    Science.gov (United States)

    Aparicio, Frederic; Pallás, Vicente

    2002-01-01

    The nucleotide sequences of the RNA 3 of fifteen isolates of Prunus necrotic ringspot virus (PNRSV) varying in the symptomatology they cause in six different Prunus spp. were determined. Analysis of the molecular variability has allowed, in addition to study the phylogenetic relationships among them, to evaluate the minimal requirements for the synthesis of the subgenomic RNA in Ilarvirus genus and their comparison to other members of the Bromoviridae family. Computer assisted comparisons led recently to Jaspars (Virus Genes 17, 233-242, 1998) to propose that a hairpin structure in viral minus strand RNA is required for subgenomic promoter activity of viruses from at least two, and possibly all five, genera in the family of Bromoviridae. For PNRSV and Apple mosaic virus two stable hairpins were proposed whereas for the rest of Ilarviruses and the other four genera of the Bromoviridae family only one stable hairpin was predicted. Comparative analysis of this region among the fifteen PNRSV isolates characterized in this study revealed that two of them showed a 12-nt deletion that led to the disappearance of the most proximal hairpin to the initiation site. Interestingly, the only hairpin found in these two isolates is very similar in primary and secondary structure to the one previously shown in Brome mosaic virus to be required for the synthesis of the subgenomic RNA. In this hairpin, the molecular diversity was concentrated mostly at the loop whereas compensatory mutations were observed at the base of the stem strongly suggesting its functional relevance. The evolutionary implications of these observations are discussed.

  10. Plant growth and trace-element uptake on acidic coal refuse amended with lime or fly ash

    Energy Technology Data Exchange (ETDEWEB)

    Jastrow, J.D. (Argonne National Lab., IL); Zimmerman, C.A.; Dvorak, A.J.; Hinchman, R.R.

    1981-04-01

    Two commonly used revegetation species, Kentucky 31 tall fescue (Festuca arundinacea Schreb.) and Lincoln smooth brome (Bromus inermis Leyss.), were grown for 60 days in pots containing coarse coal mine refuse (referred to as gob, pH = 3.5) amended with either lime or alkaline powerplant fly ash. Both species were also grown in pots containing a silt loam surface soil as a control. Morphological growth parameters were measured over time; dry weights and shoot/root ratios were determined at harvest. Concentrations of Al, As, Cd, Co, Cr, Cu, Fe, Hg, Mn, Ni, Pb, Se, V, and Zn in the plant shoots were determined by atomic absorption spectrophotometry. Plant growth of both species was not as good on either lime- or fly ash-amended gob as it was on surface soil; however, more vigorous growth occurred on lime-amended gob than on fly ash-amended gob. Significant differences (rho < 0.05) in the tissue concentrations of Cd, Co, Fe, Hg, Mn, Pb, V, and Zn were found among the plants grown on the three substrates. Except for Hg and Pb, these elements were higher in plants grown on at least one of the amended-gob substrates than in plants grown on surface soil. Significant substrate differences were not observed for Al, As, Cr, Cu, Ni, and Se. The tissue concentrations of some elements - notably Al, Cu, Fe, Mn, V, and Zn - were high enough in plants from one or more of the substrates to either approach or exceed concentrations which have been reported to be associated with toxic effects in some plant species.

  11. Analysis of the solvent accessibility of cysteine residues on Maize rayado fino virus virus-like particles produced in Nicotiana benthamiana plants and cross-linking of peptides to VLPs.

    Science.gov (United States)

    Natilla, Angela; Hammond, Rosemarie W

    2013-02-14

    displayed on the surface of plant viruses such as, Brome mosaic virus, Carnation mottle virus, Cowpea chlorotic mottle virus, Tobacco mosaic virus, Turnip yellow mosaic virus, and MRFV.

  12. Effect of fiber-based creep feed on intake, digestion, ruminal fermentation, and microbial efficiency in nursing calves.

    Science.gov (United States)

    Soto-Navarro, S A; Knight, M H; Lardy, G P; Bauer, M L; Caton, J S

    2004-12-01

    Six Angus crossbred cow-calf pairs (653 +/- 35 kg and 157 +/- 10 kg initial BW for cows and calves, respectively) were used to evaluate the influence of a fiber-based creep feed on intake, ruminal fermentation, digestion characteristics, and microbial efficiency in nursing beef calves. Cow-calf pairs were stratified by calf age and assigned randomly to one of two treatments: control (no supplement) or supplemented. Supplemented calves received 0.9 kg of a 49% soy hulls, 44% wheat middlings, 6% molasses, and 1% limestone supplement (DM basis) daily. All calves were cannulated in the rumen and duodenum and given ad libitum access to chopped brome hay (Bromus inermus L; 7.43% CP, 40.96% ADF, and 63.99% NDF; DM basis). Supplementation was initiated on May 1 (88 +/- 10.3 d calf age). Three sampling periods were conducted throughout the study (June 14 to 25, July 5 to 16, and August 9 to 20). Supplement and forage were offered at 0800 daily. Total, hay, and milk OM intakes of nursing calves were not affected by supplementation (2,014 vs. 2,328 +/- 288.8, 1,486 vs. 1,029 +/- 3,06.9, and 528 vs. 575 +/- 87.0 g/d, respectively). Milk OM intake was less (P 0.40) total-tract OM digestibility during June and August; however, during July, total-tract OM digestibility was lower (P = 0.03) for the control calves. Ruminal ammonia concentration, total VFA, and butyrate molar proportion increased (P effects on OM intake, total-tract OM digestibility, and ruminal fermentation characteristics in nursing beef calves.

  13. Comparative Study of Non-Enveloped Icosahedral Viruses Size.

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    Nikolai Nikitin

    Full Text Available Now, as before, transmission electron microscopy (TEM is a widely used technique for the determination of virions size. In some studies, dynamic light scattering (DLS has also been applied for this purpose. Data obtained by different authors and using different methods could vary significantly. The process of TEM sample preparation involves drying on the substrate, which can cause virions to undergo morphology changes. Therefore, other techniques should be used for measurements of virions size in liquid, (i.e. under conditions closer to native. DLS and nanoparticle tracking analysis (NTA provide supplementary data about the virions hydrodynamic diameter and aggregation state in liquid. In contrast to DLS, NTA data have a higher resolution and also are less sensitive to minor admixtures. In the present work, the size of non-enveloped icosahedral viruses of different nature was analyzed by TEM, DLS and NTA: the viruses used were the encephalomyocarditis virus (animal virus, and cauliflower mosaic virus, brome mosaic virus and bean mild mosaic virus (plant viruses. The same, freshly purified, samples of each virus were used for analysis using the different techniques. The results were compared with earlier published data and description databases. DLS data about the hydrodynamic diameter of bean mild mosaic virus, and NTA data for all examined viruses, were obtained for the first time. For all virus samples, the values of size obtained by TEM were less than virions sizes determined by DLS and NTA. The contribution of the electrical double layer (EDL in virions hydrodynamic diameter was evaluated. DLS and NTA data adjusted for EDL thickness were in better agreement with TEM results.

  14. Legume finishing provides beef with positive human dietary fatty acid ratios and consumer preference comparable with grain-finished beef.

    Science.gov (United States)

    Chail, A; Legako, J F; Pitcher, L R; Griggs, T C; Ward, R E; Martini, S; MacAdam, J W

    2016-05-01

    Consumer liking, proximate composition, pH, Warner-Bratzler shear force, fatty acid composition, and volatile compounds were determined from the LM (longissimus thoracis) of cattle ( = 6 per diet) finished on conventional feedlot (USUGrain), legume, and grass forage diets. Forage diets included a condensed tannin-containing perennial legume, birdsfoot trefoil (; USUBFT), and a grass, meadow brome ( Rehmann; USUGrass). Moreover, representative retail forage (USDA Certified Organic Grass-fed [OrgGrass]) and conventional beef (USDA Choice, Grain-fed; ChGrain) were investigated ( = 6 per retail type). The ChGrain had the greatest ( 0.05) to that of both USUGrain and USUGrass. Both grain-finished beef treatments were rated greater ( Consumer liking of USUBFT beef tenderness, fattiness, and overall liking were comparable ( > 0.05) with that of USUGrain and ChGrain. Flavor liking was rated greatest ( 0.05) to those of ChGrain, USUGrass, and OrgGrass. Cumulative SFA and MUFA concentrations were greatest ( 0.05) to those of USUGrain and USUGrass. Each forage-finished beef treatment, USUGrass, OrgGrass, and USUBFT, had lower ( < 0.001) ratios of -6:-3 fatty acids. Hexanal was the most numerically abundant volatile compound. The concentration of hexanal increased with increasing concentrations of total PUFA. Among all the lipid degradation products (aldehydes, alcohols, furans, carboxylic acids, and ketones) measured in this study, there was an overall trend toward greater quantities in grain-finished products, lower quantities in USUGrass and OrgGrass, and intermediate quantities in USUBFT. This trend was in agreement with IMF content, fatty acid concentrations, and sensory attributes. These results suggest an opportunity for a birdsfoot trefoil finishing program, which results in beef comparable in sensory quality with grain-finished beef but with reduced -6 and SFA, similar to grass-finished beef.

  15. Solar radiation affects grapevine susceptibility to Plasmopara Viticola Radiação solar e susceptibilidade da videira à Plasmopara Viticola

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    Anna Dalla Marta

    2008-12-01

    Full Text Available Solar radiation plays an important role in the development of some fungal diseases due to its direct action on the microorganisms and also its indirect effect on the production of specific plant compounds. This experiment examined the effect of two light environments (100% and 35% of full strength on the polyphenolic content of grapevine leaves and quantified their relation to resistance to downy mildew (Plasmopara viticola. Leaf epidermal polyphenolic contents were non-destructively measured during the growing season 2006 using the Dualex chlorophyll fluorescence-based portable leaf-clip. The experimental design consisted of six parcels of 30 vines and measurements were performed on the 12 central vines. The leaves were inoculated with a sporangia suspension containing 50,000 sporangia of P. viticola per mL and the disease severity was assessed after the appearance of symptoms. Leaves maintained at 100% sun had high polyphenolic content and significantly lower disease severity compared to leaves under shading nets. These results indicate an inverse relationship between produced polyphenolics and downy mildew severity.A radiação solar exerce papel importante no desenvolvimento de algumas doenças fúngicas, devido à sua ação direta sobre os microorganismos e também devido ao seu efeito indireto sobre a produção de compostos específicos nas plantas. Este experimento examinou o efeito de dois ambientes de luz (100% e 35% da intensidade máxima sobre o conteúdo de polifenóis nas folhas da videira e quantificou sua relação com a resistência ao míldio (Plasmopara viticola. As concentrações de polifenóis na epiderme das folhas foram quantificadas de forma não destrutiva, durante a estação de crescimento de 2006, usando o equipamento portátil Dualex, baseado na fluorescência da clorofila. O delineamento experimental consistiu de seis parcelas de 30 videiras e as medidas foram feitas nas 12 plantas centrais. As folhas foram

  16. Habitat Evaluation Procedures (HEP) Report : Hellsgate Project, 1999-2000 Technical Report.

    Energy Technology Data Exchange (ETDEWEB)

    Berger, Matthew

    2000-05-01

    A Habitat Evaluation Procedure (HEP) study was conducted on lands acquired and/or managed (4,568 acres total) by the Hellsgate Big Game Winter Range Wildlife Mitigation Project (Hellsgate project) to mitigate some of the losses associated with the original construction and operation of Grand Coulee Dam and inundation of habitats behind the dams. Three separate properties, totaling 2,224 acres were purchased in 1998. One property composed of two separate parcels, mostly grassland lies southeast of the town of Nespelem in Okanogan County (770 acres) and was formerly called the Hinman property. The former Hinman property lies within an area the Tribes have set aside for the protection and preservation of the sharp-tailed grouse (Agency Butte unit). This special management area minus the Hinman acquisition contains 2,388 acres in a long-term lease with the Tribes. The second property lies just south of the Silver Creek turnoff (Ferry County) and is bisected by the Hellsgate Road (part of the Friedlander unit). This parcel contains 60 acres of riparian and conifer forest cover. The third property (now named the Sand Hills unit) acquired for mitigation (1,394 acres) lies within the Hellsgate Reserve in Ferry County. This new acquisition links two existing mitigation parcels (the old Sand Hills parcels and the Lundstrum Flat parcel, all former Kuehne purchases) together forming one large unit. HEP team members included individuals from the Colville Confederated Tribes Fish and Wildlife Department (CTCR), Washington Department of Fish and Wildlife (WDFW), and Bureau of Land Management (BLM). The HEP team conducted a baseline habitat survey using the following HEP species models: mule deer (Odocoileus hemionus), mink (Mustela vison), downy woodpecker (Picoides pubescens), bobcat (Lynx rufus), yellow warbler (Dendroica petechia), and sharp-tailed grouse (Tympanuchus phasianellus columbianus). HEP analysis and results are discussed within the body of the text. The cover types

  17. The sulfated laminarin triggers a stress transcriptome before priming the SA- and ROS-dependent defenses during grapevine's induced resistance against Plasmopara viticola.

    Directory of Open Access Journals (Sweden)

    Adrien Gauthier

    Full Text Available Grapevine (Vitis vinifera is susceptible to many pathogens which cause significant losses to viticulture worldwide. Chemical control is available, but agro-ecological concerns have raised interest in alternative methods, especially in triggering plant immunity by elicitor treatments. The β-glucan laminarin (Lam and its sulfated derivative (PS3 have been previously demonstrated to induce resistance in grapevine against downy mildew (Plasmopara viticola. However, if Lam elicits classical grapevine defenses such as oxidative burst, pathogenesis-related (PR-proteins and phytoalexin production, PS3 triggered grapevine resistance via a poorly understood priming phenomenon. The aim of this study was to identify the molecular mechanisms of the PS3-induced resistance. For this purpose we studied i the signaling events and transcriptome reprogramming triggered by PS3 treatment on uninfected grapevine, ii grapevine immune responses primed by PS3 during P. viticola infection. Our results showed that i PS3 was unable to elicit reactive oxygen species (ROS production, cytosolic Ca(2+ concentration variations, mitogen-activated protein kinase (MAPK activation but triggered a long lasting plasma membrane depolarization in grapevine cells, ii PS3 and Lam shared a common stress-responsive transcriptome profile that partly overlapped the salicylate- (SA and jasmonate-(JA-dependent ones. After P. viticola inoculation, PS3 specifically primed the SA- and ROS-dependent defense pathways leading to grapevine induced resistance against this biotroph. Interestingly pharmacological approaches suggested that the plasma membrane depolarization and the downstream ROS production are key events of the PS3-induced resistance.

  18. Identification of Biomarkers for Defense Response to Plasmopara viticola in a Resistant Grape Variety

    Directory of Open Access Journals (Sweden)

    Giulia Chitarrini

    2017-09-01

    Full Text Available Downy mildew (Plasmopara viticola is one of the most destructive diseases of the cultivated species Vitis vinifera. The use of resistant varieties, originally derived from backcrosses of North American Vitis spp., is a promising solution to reduce disease damage in the vineyards. To shed light on the type and the timing of pathogen-triggered resistance, this work aimed at discovering biomarkers for the defense response in the resistant variety Bianca, using leaf discs after inoculation with a suspension of P. viticola. We investigated primary and secondary metabolism at 12, 24, 48, and 96 h post-inoculation (hpi. We used methods of identification and quantification for lipids (LC-MS/MS, phenols (LC-MS/MS, primary compounds (GC-MS, and semi-quantification for volatile compounds (GC-MS. We were able to identify and quantify or semi-quantify 176 metabolites, among which 53 were modulated in response to pathogen infection. The earliest changes occurred in primary metabolism at 24–48 hpi and involved lipid compounds, specifically unsaturated fatty acid and ceramide; amino acids, in particular proline; and some acids and sugars. At 48 hpi, we also found changes in volatile compounds and accumulation of benzaldehyde, a promoter of salicylic acid-mediated defense. Secondary metabolism was strongly induced only at later stages. The classes of compounds that increased at 96 hpi included phenylpropanoids, flavonols, stilbenes, and stilbenoids. Among stilbenoids we found an accumulation of ampelopsin H + vaticanol C, pallidol, ampelopsin D + quadrangularin A, Z-miyabenol C, and α-viniferin in inoculated samples. Some of these compounds are known as phytoalexins, while others are novel biomarkers for the defense response in Bianca. This work highlighted some important aspects of the host response to P. viticola in a commercial variety under controlled conditions, providing biomarkers for a better understanding of the mechanism of plant defense and a

  19. Disease resistance breeding in rose: current status and potential of biotechnological tools.

    Science.gov (United States)

    Debener, Thomas; Byrne, David H

    2014-11-01

    The cultivated rose is a multispecies complex for which a high level of disease protection is needed due to the low tolerance of blemishes in ornamental plants. The most important fungal diseases are black spot, powdery mildew, botrytis and downy mildew. Rose rosette, a lethal viral pathogen, is emerging as a devastating disease in North America. Currently rose breeders use a recurrent phenotypic selection approach and perform selection for disease resistance for most pathogen issues in a 2-3 year field trial. Marker assisted selection could accelerate this breeding process. Thus far markers have been identified for resistance to black spot (Rdrs) and powdery mildew and with the ability of genotyping by sequencing to generate 1000s of markers our ability to identify markers useful in plant improvement should increase exponentially. Transgenic rose lines with various fungal resistance genes inserted have shown limited success and RNAi technology has potential to provide virus resistance. Roses, as do other plants, have sequences homologous to characterized R-genes in their genomes, some which have been related to specific disease resistance. With improving next generation sequencing technology, our ability to do genomic and transcriptomic studies of the resistance related genes in both the rose and the pathogens to reveal novel gene targets to develop resistant roses will accelerate. Finally, the development of designer nucleases opens up a potentially non-GMO approach to directly modify a rose's DNA to create a disease resistant rose. Although there is much potential, at present rose breeders are not using marker assisted breeding primarily because a good suite of marker/trait associations (MTA) that would ensure a path to stable disease resistance is not available. As our genomic analytical tools improve, so will our ability to identify useful genes and linked markers. Once these MTAs are available, it will be the cost savings, both in time and money, that will

  20. Current Status and Challenges in Identifying Disease Resistance Genes in Brassica napus

    Science.gov (United States)

    Neik, Ting Xiang; Barbetti, Martin J.; Batley, Jacqueline

    2017-01-01

    Brassica napus is an economically important crop across different continents including temperate and subtropical regions in Europe, Canada, South Asia, China and Australia. Its widespread cultivation also brings setbacks as it plays host to fungal, oomycete and chytrid pathogens that can lead to serious yield loss. For sustainable crop production, identification of resistance (R) genes in B. napus has become of critical importance. In this review, we discuss four key pathogens affecting Brassica crops: Clubroot (Plasmodiophora brassicae), Blackleg (Leptosphaeria maculans and L. biglobosa), Sclerotinia Stem Rot (Sclerotinia sclerotiorum), and Downy Mildew (Hyaloperonospora parasitica). We first review current studies covering prevalence of these pathogens on Brassica crops and highlight the R genes and QTL that have been identified from Brassica species against these pathogens. Insights into the relationships between the pathogen and its Brassica host, the unique host resistance mechanisms and how these affect resistance outcomes is also presented. We discuss challenges in identification and deployment of R genes in B. napus in relation to highly specific genetic interactions between host subpopulations and pathogen pathotypes and emphasize the need for common or shared techniques and research materials or tighter collaboration between researchers to reconcile the inconsistencies in the research outcomes. Using current genomics tools, we provide examples of how characterization and cloning of R genes in B. napus can be carried out more effectively. Lastly, we put forward strategies to breed resistant cultivars through introgressions supported by genomic approaches and suggest prospects that can be implemented in the future for a better, pathogen-resistant B. napus. PMID:29163558

  1. Arboreal Ants Use the “Velcro® Principle” to Capture Very Large Prey

    Science.gov (United States)

    Dejean, Alain; Leroy, Céline; Corbara, Bruno; Roux, Olivier; Céréghino, Régis; Orivel, Jérôme; Boulay, Raphaël

    2010-01-01

    Plant-ants live in a mutualistic association with host plants known as “myrmecophytes” that provide them with a nesting place and sometimes with extra-floral nectar (EFN) and/or food bodies (FBs); the ants can also attend sap-sucking Hemiptera for their honeydew. In return, plant-ants, like most other arboreal ants, protect their host plants from defoliators. To satisfy their nitrogen requirements, however, some have optimized their ability to capture prey in the restricted environment represented by the crowns of trees by using elaborate hunting techniques. In this study, we investigated the predatory behavior of the ant Azteca andreae which is associated with the myrmecophyte Cecropia obtusa. We noted that up to 8350 ant workers per tree hide side-by-side beneath the leaf margins of their host plant with their mandibles open, waiting for insects to alight. The latter are immediately seized by their extremities, and then spread-eagled; nestmates are recruited to help stretch, carve up and transport prey. This group ambush hunting technique is particularly effective when the underside of the leaves is downy, as is the case for C. obtusa. In this case, the hook-shaped claws of the A. andreae workers and the velvet-like structure of the underside of the leaves combine to act like natural Velcro® that is reinforced by the group ambush strategy of the workers, allowing them to capture prey of up to 13,350 times the mean weight of a single worker. PMID:20593032

  2. Experimentation of grapevine cultivation in organic system, on five different Romanian vineyards

    Directory of Open Access Journals (Sweden)

    Aurora Maria Ranca

    2016-11-01

    Full Text Available In five Romanian vineyards, in 2013-2014 period was experimented organic system growing on  grape varieties for wine representative for each area, here are applied organic growing technology in parallel with the conventional (control. White varieties studied are: Chardonnay (Murfatlar and Valea Calugareasca, Sauvignon blanc and Muscat Ottonel(Tarnave, Feteasca regala (Tarnave, Bujoru and Copou-Iasi. Red varieties are Cabernet Sauvignon (Murfatlar and Valea Calugareasca and Merlot (Bujoru. Concerning evolution of main climatic factors for the years 2013-2014 it is show that the annual average air temperature increase compared with the average of the years 1991-2010; is observed an increasing in mean annual temperature, mean temperature during the growing season and the value of sum of sunshine hours. The water regime was kept constant, registering values close to the annual average, both during the growing season and at entire year. The weeds spectrum is represented both by dicotyledonous as knotweed (Polygonum aviculare, Veronica (Stellaria media, news (Amaranthus retroflexus, bindweed (Convolvurus arvensis and monocotyledonous as grass thick (Cynodon dactylon. Concerning the phytosanitary status, at Murfatlar were registered problems with oidium attack, with all main disease at Dealu Mare and with downy mildew at Bujoru. In all areas the pest has been found are: grape mouth (Lobesia botrana and spiders (Tetranichus sp.. Schemes of treatments focused generally on substances bassed on copper and sulfur to combat diseases and for pests have been used pheromonal traps or other certified organic products. The grapes harvest was lower in organic plots with till 25%; their quality being close at both growing variants.

  3. Rapid Determination of Thiabendazole Pesticides in Rape by Surface Enhanced Raman Spectroscopy.

    Science.gov (United States)

    Lin, Lei; Dong, Tao; Nie, Pengcheng; Qu, Fangfang; He, Yong; Chu, Bingquan; Xiao, Shupei

    2018-04-04

    Thiabendazole is widely used in sclerotium blight, downy mildew and black rot prevention and treatment in rape. Accurate monitoring of thiabendazole pesticides in plants will prevent potential adverse effects to the Environment and human health. Surface Enhanced Raman Spectroscopy (SERS) is a highly sensitive fingerprint with the advantages of simple operation, convenient portability and high detection efficiency. In this paper, a rapid determination method of thiabendazole pesticides in rape was conducted combining SERS with chemometric methods. The original SERS were pretreated and the partial least squares (PLS) was applied to establish the prediction model between SERS and thiabendazole pesticides in rape. As a result, the SERS enhancing effect based on silver Nano-substrate was better than that of gold Nano-substrate, where the detection limit of thiabendazole pesticides in rape could reach 0.1 mg/L. Moreover, 782, 1007 and 1576 cm −1 could be determined as thiabendazole pesticides Raman characteristic peaks in rape. The prediction effect of thiabendazole pesticides in rape was the best ( R p 2 = 0.94, RMSEP = 3.17 mg/L) after the original spectra preprocessed with 1st-Derivative, and the linear relevance between thiabendazole pesticides concentration and Raman peak intensity at 782 cm −1 was the highest ( R² = 0.91). Furthermore, five rape samples with unknown thiabendazole pesticides concentration were used to verify the accuracy and reliability of this method. It was showed that prediction relative standard deviation was 0.70–9.85%, recovery rate was 94.71–118.92% and t value was −1.489. In conclusion, the thiabendazole pesticides in rape could be rapidly and accurately detected by SERS, which was beneficial to provide a rapid, accurate and reliable scheme for the detection of pesticides residues in agriculture products.

  4. Rapid Determination of Thiabendazole Pesticides in Rape by Surface Enhanced Raman Spectroscopy

    Directory of Open Access Journals (Sweden)

    Lei Lin

    2018-04-01

    Full Text Available Thiabendazole is widely used in sclerotium blight, downy mildew and black rot prevention and treatment in rape. Accurate monitoring of thiabendazole pesticides in plants will prevent potential adverse effects to the Environment and human health. Surface Enhanced Raman Spectroscopy (SERS is a highly sensitive fingerprint with the advantages of simple operation, convenient portability and high detection efficiency. In this paper, a rapid determination method of thiabendazole pesticides in rape was conducted combining SERS with chemometric methods. The original SERS were pretreated and the partial least squares (PLS was applied to establish the prediction model between SERS and thiabendazole pesticides in rape. As a result, the SERS enhancing effect based on silver Nano-substrate was better than that of gold Nano-substrate, where the detection limit of thiabendazole pesticides in rape could reach 0.1 mg/L. Moreover, 782, 1007 and 1576 cm−1 could be determined as thiabendazole pesticides Raman characteristic peaks in rape. The prediction effect of thiabendazole pesticides in rape was the best ( R p 2 = 0.94, RMSEP = 3.17 mg/L after the original spectra preprocessed with 1st-Derivative, and the linear relevance between thiabendazole pesticides concentration and Raman peak intensity at 782 cm−1 was the highest (R2 = 0.91. Furthermore, five rape samples with unknown thiabendazole pesticides concentration were used to verify the accuracy and reliability of this method. It was showed that prediction relative standard deviation was 0.70–9.85%, recovery rate was 94.71–118.92% and t value was −1.489. In conclusion, the thiabendazole pesticides in rape could be rapidly and accurately detected by SERS, which was beneficial to provide a rapid, accurate and reliable scheme for the detection of pesticides residues in agriculture products.

  5. A new disjunct eddy-covariance system for BVOC flux measurements - validation on CO2 and H2O fluxes

    Science.gov (United States)

    Baghi, R.; Durand, P.; Jambert, C.; Jarnot, C.; Delon, C.; Serça, D.; Striebig, N.; Ferlicoq, M.; Keravec, P.

    2012-12-01

    The disjunct eddy covariance (DEC) method is an interesting alternative to the conventional eddy covariance (EC) method because it allows the estimation of turbulent fluxes of species for which fast sensors are not available. We have developed and validated a new disjunct sampling system (called MEDEE). This system is built with chemically inert materials. Air samples are taken quickly and alternately in two cylindrical reservoirs, the internal pressures of which are regulated by a moving piston. The MEDEE system was designed to be operated either on the ground or aboard an aircraft. It is also compatible with most analysers since it transfers the air samples at a regulated pressure. To validate the system, DEC and EC measurements of CO2 and latent heat fluxes were performed concurrently during a field campaign. EC fluxes were first compared to simulated DEC (SDEC) fluxes and then to actual DEC fluxes. Both the simulated and actual DEC fluxes showed a good agreement with EC fluxes in terms of correlation. The determination coefficients (R2) were 0.93 and 0.91 for DEC and SDEC latent heat fluxes, respectively. For DEC and SDEC CO2 fluxes R2 was 0.69 in both cases. The conditions of low fluxes experienced during the campaign impaired the comparison of the different techniques especially for CO2 flux measurements. Linear regression analysis showed an 14% underestimation of DEC fluxes for both CO2 and latent heat compared to EC fluxes. A first field campaign, focusing on biogenic volatile organic compound (BVOC) emissions, was carried out to measure isoprene fluxes above a downy oak (Quercus Pubescens) forest in the south-east of France. The measured standard emission rate was in the lower range of reported values in earlier studies. Further analysis will be conducted through ground-based and airborne campaigns in the coming years.

  6. Assessment of Cu applications in two contrasting soils-effects on soil microbial activity and the fungal community structure.

    Science.gov (United States)

    Keiblinger, Katharina M; Schneider, Martin; Gorfer, Markus; Paumann, Melanie; Deltedesco, Evi; Berger, Harald; Jöchlinger, Lisa; Mentler, Axel; Zechmeister-Boltenstern, Sophie; Soja, Gerhard; Zehetner, Franz

    2018-03-01

    Copper (Cu)-based fungicides have been used in viticulture to prevent downy mildew since the end of the 19th century, and are still used today to reduce fungal diseases. Consequently, Cu has built up in many vineyard soils, and it is still unclear how this affects soil functioning. The present study aimed to assess the short and medium-term effects of Cu contamination on the soil fungal community. Two contrasting agricultural soils, an acidic sandy loam and an alkaline silt loam, were used for an eco-toxicological greenhouse pot experiment. The soils were spiked with a Cu-based fungicide in seven concentrations (0-5000 mg Cu kg -1 soil) and alfalfa was grown in the pots for 3 months. Sampling was conducted at the beginning and at the end of the study period to test Cu toxicity effects on total microbial biomass, basal respiration and enzyme activities. Fungal abundance was analysed by ergosterol at both samplings, and for the second sampling, fungal community structure was evaluated via ITS amplicon sequences. Soil microbial biomass C as well as microbial respiration rate decreased with increasing Cu concentrations, with EC 50 ranging from 76 to 187 mg EDTA-extractable Cu kg -1 soil. Oxidative enzymes showed a trend of increasing activity at the first sampling, but a decline in peroxidase activity was observed for the second sampling. We found remarkable Cu-induced changes in fungal community abundance (EC 50 ranging from 9.2 to 94 mg EDTA-extractable Cu kg -1 soil) and composition, but not in diversity. A large number of diverse fungi were able to thrive under elevated Cu concentrations, though within the order of Hypocreales several species declined. A remarkable Cu-induced change in the community composition was found, which depended on the soil properties and, hence, on Cu availability.

  7. Defining an adequate sample of earlywood vessels for retrospective injury detection in diffuse-porous species.

    Directory of Open Access Journals (Sweden)

    Estelle Arbellay

    Full Text Available Vessels of broad-leaved trees have been analyzed to study how trees deal with various environmental factors. Cambial injury, in particular, has been reported to induce the formation of narrower conduits. Yet, little or no effort has been devoted to the elaboration of vessel sampling strategies for retrospective injury detection based on vessel lumen size reduction. To fill this methodological gap, four wounded individuals each of grey alder (Alnus incana (L. Moench and downy birch (Betula pubescens Ehrh. were harvested in an avalanche path. Earlywood vessel lumina were measured and compared for each tree between the injury ring built during the growing season following wounding and the control ring laid down the previous year. Measurements were performed along a 10 mm wide radial strip, located directly next to the injury. Specifically, this study aimed at (i investigating the intra-annual duration and local extension of vessel narrowing close to the wound margin and (ii identifying an adequate sample of earlywood vessels (number and intra-ring location of cells attesting to cambial injury. Based on the results of this study, we recommend analyzing at least 30 vessels in each ring. Within the 10 mm wide segment of the injury ring, wound-induced reduction in vessel lumen size did not fade with increasing radial and tangential distances, but we nevertheless advise favoring early earlywood vessels located closest to the injury. These findings, derived from two species widespread across subarctic, mountainous, and temperate regions, will assist retrospective injury detection in Alnus, Betula, and other diffuse-porous species as well as future related research on hydraulic implications after wounding.

  8. Biochar and compost as amendments in copper-enriched vineyard soils - stabilization or mobilization of copper?

    Science.gov (United States)

    Soja, Gerhard; Fristak, Vladimir; Wimmer, Bernhard; Bell, Stephen; Chamier Glisczinski, Julia; Pardeller, Georg; Dersch, Georg; Rosner, Franz; Wenzel, Walter; Zehetner, Franz

    2016-04-01

    Copper is an important ingredient for several fungicides that have been used in agriculture. For organic viticulture, several diseases as e.g. downy mildew (Plasmopara viticola) can only be antagonized with Cu-containing fungicides. This long-lasting dependence on Cu-fungicides has led to a gradual Cu enrichment of vineyard soils in traditional wine-growing areas, occasionally exceeding 300 mg/kg. Although these concentrations do not affect the vines or wine quality, they may impair soil microbiological functions in the top soil layer or the root growth of green cover plants. Therefore measures are demanded that reduce the bioavailability of copper, thereby reducing the ecotoxicological effects. The use of biochar and compost as soil amendment has been suggested as a strategy to immobilize Cu and reduce the exchangeable fractions. This study consisted of lab and greenhouse experiments that were designed to test the sorption and desorption behavior of copper in vineyard soils with or without biochar and/or compost as soil amendment. Slightly acidic soils (pHeffects were more evident for a reduction of the ionic form Cu2+ than for total soluble copper, even in alkaline soils. Biochar modified with citric or tartaric acid did not significantly decrease the solubility of copper based on total dissolved concentrations although CEC was higher than in unmodified biochar. Treatments consisting of compost only or that had an equal amount of compost and biochar rather had a mobilizing effect on biochar. Sorption experiments with different DOC concentrations and biochar, however, showed a positive effect on copper sorption. Apparently in vineyard soils the predisposition to form organic-Cu-complexes may outbalance the binding possibilities of these complexes to biochar, occasionally resulting in enhanced mobilization. Presumably immobilization of copper with biochar would work best in acidic soils low in organic carbon and with low or no compost addition although this might

  9. Dinamika Populasi Hama dan Penyakit Utama Tanaman Jagung Manis (Zea mays saccharata Sturt pada Lahan Basah dengan Sistem Budidaya Konvensional serta Pengaruhnya terhadap Hasil di Denpasar-Bali

    Directory of Open Access Journals (Sweden)

    SALBERD FERDINAN RONDO

    2016-11-01

    Full Text Available Dynamics of Pest Population and Main Diseases of Sweet Corn Plants (Zeamays saccharata Sturt at Wetland with Conventional Cultivation Systemand Their Effect on Yields in Denpasar-Bali. The study was conducted usingsurvey techniques of pests and diseases in paddy fields belonging to farmers in Denpasar-Bali, which consists of three fields. The three areas were Sidakarya, Renon and Kesiman.Plant samples in each land were taken using the sample plot diagonal method, with the areaof diagonal plot in each land was 3 m x 3 m. Plot observations on each of the specified areaof plant samples was done randomly (lottery as much as 25% of the total number of plantsper-plot, then observation was done for population growth of pests and diseases, temperature,humidity and crop yield. The observations was started from 1week old plants after planting(MST to 1 week before harvesting, with intervals of 1 week. Recording the population ofpests and diseases from week to week, the temperature condition and humidity in each areaand the condition of the field ( the existing other plants, mulching. Recorded informationabout conventional cultivation systems applied by each farmer were be explored throughinterview techniques. The data were then analyzed using correlation and regression and weredescriptively explained. The results showed that there were four main types of pests (locusts,seed flies, armyworm and caterpillars cob and three kinds of major diseases (blight, rust anddowny mildew associated with sweet corn. The results also showed that there was nosignificant between the correlation dynamics of pest population and diseases withtemperature and humidity. As for the commercial harvest, significant effect was shown by thediseases that had an impact on the decrease in yield in quantity especially downy mildew andpest impact on the quality of yields, especially caterpillar cob.

  10. Elevated genetic diversity in an F2:6 population of quinoa (Chenopodium quinoa developed through an inter-ecotype cross

    Directory of Open Access Journals (Sweden)

    Ouafae Benlhabib

    2016-08-01

    Full Text Available Quinoa (Chenopodium quinoa is a seed crop of the Andean highlands and Araucanian coastal regions of South America that has recently expanded in use and production beyond its native range. This is largely due its superb nutritional value, consisting of protein that is rich in essential amino acids along with vitamins and minerals. Quinoa also presents a remarkable degree of tolerance to saline conditions, drought, and frost. The present study involved 72 F2:6 recombinant inbred lines (RIL and parents developed through hybridization between highland (0654 and coastal (NL-6 germplasm groups. The purpose was to characterize the quinoa germplasm developed, to assess the discriminating potential of 21 agro-morpho phenological traits, and to evaluate the extent of genetic variability recovered through selfing. A vast amount of genetic variation was detected among the 72 lines evaluated for quantitative and qualitative traits. Impressive transgressive segregation was measured for seed yield (22.42 g/plant, while plant height and maturity had higher heritabilities (73 and 89%, respectively. Other notable characters segregating in the population included panicle and stem color, panicle form, and resistance to downy mildew. In the Principal Component analysis, the first axis explained 74% of the total variation and was correlated to plant height, panicle size, stem diameter, biomass, mildew reaction, maturation, and seed yield; those traits are relevant discriminatory characters. Yield correlated positively with panicle length and biomass. UPGMA based cluster analysis identified three groups: one consisting of late, mildew-resistant, high yielding lines; one having semi-late lines with intermediate yield and mildew susceptibility; and a third cluster consisting of early to semi-late accessions with low yield and mildew susceptibility. This study highlighted the extended diversity regenerated among the 72 accessions and helped to identify potentially

  11. Effect of heat treatment of wood on the morphology, surface roughness and penetration of simulated and human blood.

    Science.gov (United States)

    Rekola, J; Lassila, L V J; Nganga, S; Ylä-Soininmäki, A; Fleming, G J P; Grenman, R; Aho, A J; Vallittu, P K

    2014-01-01

    Wood has been used as a model material for the development of novel fiber-reinforced composite bone substitute biomaterials. In previous studies heat treatment of wood was perceived to significantly increase the osteoconductivity of implanted wood material. The objective of this study was to examine some of the changing attributes of wood materials that may contribute to improved biological responses gained with heat treatment. Untreated and 140°C and 200°C heat-treated downy birch (Betula pubescens Ehrh.) were used as the wood materials. Surface roughness and the effect of pre-measurement grinding were measured with contact and non-contact profilometry. Liquid interaction was assessed with a dipping test using two manufactured liquids (simulated blood) as well as human blood. SEM was used to visualize possible heat treatment-induced changes in the hierarchical structure of wood. The surface roughness was observed to significantly decrease with heat treatment. Grinding methods had more influence on the surface contour and roughness than heat treatment. The penetration of the human blood in the 200°C heat-treated exceeded that in the untreated and 140°C heat-treated materials. SEM showed no significant change due to heat treatment in the dry-state morphology of the wood. The results of the liquid penetration test support previous findings in literature concerning the effects of heat treatment on the biological response to implanted wood. Heat-treatment has only a marginal effect on the surface contour of wood. The highly specialized liquid conveyance system of wood may serve as a biomimetic model for the further development of tailored fiber-composite materials.

  12. Gene transfer from wild Helianthus to sunflower: topicalities and limits

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    Breton Catherine

    2010-03-01

    Full Text Available Sunflower (2n=17 belongs to the Helianthus genus (Asteraceae. Wild Helianthus species display morphological variation for branching and stem number, for architecture and seed size, and for resistance to abiotic and biotic stresses due to which they thrive in different environments in North America. The genus is divided into botanical sections, two for annual as sunflower, and two for perennial species as Jerusalem artichoke that produces rhizomes (tubers. We explain the difficulties and successes obtained by crossing sunflower with these species to improve the agronomic traits of the sunflower crop. It is easier to cross the annual species than the perennials’ with sunflower. Several traits such as Cytoplasmic male sterility and restorer Rf-PET1 genes, Downy mildew resistance, Phomopsis resistance, Sclerotinia resistance, Rust resistance, and Orobanche resistance have already been introduced from annual species into sunflower crop, but the complex genomic organization of these species compared to sunflower limits their important potential. Perennial species are much more diverse, and their genomes display 2n, 4n, or 6n chromosomes for n 17. The realities of inter-specific hybridization are relatively disappointing due to the introgression lines that have low oil and low seed yield. We report here several attempts to introgress agronomic traits from these species to sunflower, and we present as a case study, an introgressed progenies from H. mollis, a diploid species with sessile small leaves. We constructed a preliminary genetic map with AFLP markers in 21 BC1 plants, and we then showed that some progenies display 6 to 44% of introgression from H. mollis. Although this study is promising due to the novel compact architecture of the progenies, we cannot estimate the transferability from H. mollis to other perennial Helianthus to improve sunflower.

  13. Current Status and Challenges in Identifying Disease Resistance Genes in Brassica napus

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    Ting Xiang Neik

    2017-11-01

    Full Text Available Brassica napus is an economically important crop across different continents including temperate and subtropical regions in Europe, Canada, South Asia, China and Australia. Its widespread cultivation also brings setbacks as it plays host to fungal, oomycete and chytrid pathogens that can lead to serious yield loss. For sustainable crop production, identification of resistance (R genes in B. napus has become of critical importance. In this review, we discuss four key pathogens affecting Brassica crops: Clubroot (Plasmodiophora brassicae, Blackleg (Leptosphaeria maculans and L. biglobosa, Sclerotinia Stem Rot (Sclerotinia sclerotiorum, and Downy Mildew (Hyaloperonospora parasitica. We first review current studies covering prevalence of these pathogens on Brassica crops and highlight the R genes and QTL that have been identified from Brassica species against these pathogens. Insights into the relationships between the pathogen and its Brassica host, the unique host resistance mechanisms and how these affect resistance outcomes is also presented. We discuss challenges in identification and deployment of R genes in B. napus in relation to highly specific genetic interactions between host subpopulations and pathogen pathotypes and emphasize the need for common or shared techniques and research materials or tighter collaboration between researchers to reconcile the inconsistencies in the research outcomes. Using current genomics tools, we provide examples of how characterization and cloning of R genes in B. napus can be carried out more effectively. Lastly, we put forward strategies to breed resistant cultivars through introgressions supported by genomic approaches and suggest prospects that can be implemented in the future for a better, pathogen-resistant B. napus.

  14. Dwarf mutant of Papaver somniferum with high morphine content

    International Nuclear Information System (INIS)

    Chauhan, S.P.; Patra, N.K.; Srivastava, H.K.

    1987-01-01

    Opium poppy, Papaver somniferum L. is an important medicinal plant known for its morphine, codeine, and thebaine alkaloids. This Institute had earlier released two latex opium yielding poppy varieties, Shyama and Shweta, which are now cultivated by the farmers under the supervision of the Narcotic Department of the Government of India. However, both these varieties became susceptible to downy mildew (Peronospora arborescens). Lodging due to heavy capsule weight is another problem affecting latex yield. With these problems in mind, we undertook mutation breeding on the above mentioned two varieties employing gamma rays (5 kR, 15 kR, 20 kR) and EMS (0.2%, 0.4%, 0.6%) and combined mutagens (5 kR + 0.2% EMS, 5 kR + 0.4% EMS and 5 kR + 0.6% EMS). M 1 from the treated seeds (405 plants) was raised in winter 1984-85. M 2 generation of 13,500 plants (i.e. 270 M 1 progenies x 50 plants) was raised in winter 1985/86. A dwarf mutant with high morphine content was identified in M 2 from the variety Shweta treated with 5 kR + 0.4% EMS. The mutant differs by its dwarf stature, compact leaf arrangements, multilocular capsules, increased capsule number, and small capsule size. The mutant is under testing for its superior morphine production. It may be used as dwarf gene source in hybridization for improving lodging resistance. This mutant is a novel type, which was not available in our germplasm collection

  15. The morphology of neoptile feathers: ancestral state reconstruction and its phylogenetic implications.

    Science.gov (United States)

    Foth, Christian

    2011-04-01

    Avian neoptile feathers are defined as the first feather generation, which covers the chick after hatching, and usually described as simple structures consisting of numerous downy barbs which are radially symmetrically arranged and come together in a short calamus. In contrast, in some birds (e.g., Anas platyrhynchos, Dromaius novaehollandiae) the neoptile feathers have a prominent rhachis, and therefore display clear bilateral symmetry. Because the symmetrical variety found in neoptile feathers is poorly understood, their morphology was studied in a more comprehensive and phylogenetic approach. Neoptile body feathers from over 22 bird species were investigated using light microscopy, SEM, and MicroCT. Characters such as an anterior-posterior axis, a central rhachis, medullary cells, and structure of the calamus wall were defined and mapped onto recent phylogenetic hypotheses for extant birds. It can be shown that bilaterally symmetric neoptile feathers (with a solid calamus wall) were already present in the stem lineage of crown-group birds (Neornithes). In contrast, simple radially symmetric neoptile feathers (with a fragile calamus wall) are an apomorphic character complex for the clade Neoaves. The simple morphology of this feather type may be the result of a reduced period of development during embryogenesis. To date, embryogenesis of neoptile feathers from only a few bird species was used as a model to reconstruct feather evolution. Because this study shows that the morphology of neoptile feathers is more diverse and even shows a clear phylogenetic signal, it is necessary to expand the spectrum of "model organisms" to species with bilaterally symmetric neoptile feathers and compare differences in the frequency of feather development from a phylogenetic point of view. Copyright © 2011 Wiley-Liss, Inc.

  16. In Planta Functional Analysis and Subcellular Localization of the Oomycete Pathogen Plasmopara viticola Candidate RXLR Effector Repertoire

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    Yunxiao Liu

    2018-04-01

    Full Text Available Downy mildew is one of the most destructive diseases of grapevine, causing tremendous economic loss in the grape and wine industry. The disease agent Plasmopara viticola is an obligate biotrophic oomycete, from which over 100 candidate RXLR effectors have been identified. In this study, 83 candidate RXLR effector genes (PvRXLRs were cloned from the P. viticola isolate “JL-7-2” genome. The results of the yeast signal sequence trap assay indicated that most of the candidate effectors are secretory proteins. The biological activities and subcellular localizations of all the 83 effectors were analyzed via a heterologous Agrobacterium-mediated Nicotiana benthamiana expression system. Results showed that 52 effectors could completely suppress cell death triggered by elicitin, 10 effectors could partially suppress cell death, 11 effectors were unable to suppress cell death, and 10 effectors themselves triggered cell death. Live-cell imaging showed that the majority of the effectors (76 of 83 could be observed with informative fluorescence signals in plant cells, among which 34 effectors were found to be targeted to both the nucleus and cytosol, 29 effectors were specifically localized in the nucleus, and 9 effectors were targeted to plant membrane system. Interestingly, three effectors PvRXLR61, 86 and 161 were targeted to chloroplasts, and one effector PvRXLR54 was dually targeted to chloroplasts and mitochondria. However, western blot analysis suggested that only PvRXLR86 carried a cleavable N-terminal transit peptide and underwent processing in planta. Many effectors have previously been predicted to target organelles, however, to the best of our knowledge, this is the first study to provide experimental evidence of oomycete effectors targeted to chloroplasts and mitochondria.

  17. EDR2 negatively regulates salicylic acid-based defenses and cell death during powdery mildew infections of Arabidopsis thaliana

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    Nishimura Marc

    2007-07-01

    Full Text Available Abstract Background The hypersensitive necrosis response (HR of resistant plants to avirulent pathogens is a form of programmed cell death in which the plant sacrifices a few cells under attack, restricting pathogen growth into adjacent healthy tissues. In spite of the importance of this defense response, relatively little is known about the plant components that execute the cell death program or about its regulation in response to pathogen attack. Results We isolated the edr2-6 mutant, an allele of the previously described edr2 mutants. We found that edr2-6 exhibited an exaggerated chlorosis and necrosis response to attack by three pathogens, two powdery mildew and one downy mildew species, but not in response to abiotic stresses or attack by the bacterial leaf speck pathogen. The chlorosis and necrosis did not spread beyond inoculated sites suggesting that EDR2 limits the initiation of cell death rather than its spread. The pathogen-induced chlorosis and necrosis of edr2-6 was correlated with a stimulation of the salicylic acid defense pathway and was suppressed in mutants deficient in salicylic acid signaling. EDR2 encodes a novel protein with a pleckstrin homology and a StAR transfer (START domain as well as a plant-specific domain of unknown function, DUF1336. The pleckstrin homology domain binds to phosphatidylinositol-4-phosphate in vitro and an EDR2:HA:GFP protein localizes to endoplasmic reticulum, plasma membrane and endosomes. Conclusion EDR2 acts as a negative regulator of cell death, specifically the cell death elicited by pathogen attack and mediated by the salicylic acid defense pathway. Phosphatidylinositol-4-phosphate may have a role in limiting cell death via its effect on EDR2. This role in cell death may be indirect, by helping to target EDR2 to the appropriate membrane, or it may play a more direct role.

  18. Some Diagnosis and Therapy Techniques in Rainbow Trout (Oncorhynchus Mykiss Furunculosis, in Intensive System Bred

    Directory of Open Access Journals (Sweden)

    Octavian Negrea

    2010-10-01

    Full Text Available Clinical and paraclinical investigations (morpho-pathologic, bacterioscopic, bacteriologic and sensitiveness test toantibodies done on 20 fish (rainbow trout, dead or in agony state, taken from a furunculosis pesthole in Salmonidaeand proceeded from an intensive exploitation unit of trout, in Cluj county, put in evidence the following aspects :Toclinical exam, in breeding basins, it appears individuals (5 % which have presented locomotor troubles, listless anduntidy swimming in water surface, lateral swimming anorexia, and on tegument it is observed diffuse hemorrhagiczones, lost of fish scale and necrosis of fins. It appears also secondary infections with fungi of Saprolegnia genusunder the form of a white- dirty, downy film. From the 20 trut corpses were isolated 2 bacterial strains, from anteriorkidney and from raclage in fin basis, with congestive lesions. Bacteria isolated are developing only after anincubation at 20 – 250 C and does not grow up to 370 C, and to microscopic exam directly from sauce, the mobility isabsent Classic biochemical tests put in evidence the following positive biochemic properties: cataloze, oxidaze,indolal and the presence of hemolytic activity. Biochemical properties testing on API20E gallery also puts inevidence properties as : positive gelatinousis and sucraze fermentation. Based on bacterial strains developmentisolated only to 20 - 250C and the above mentioned biochemic properties, respectively the absence of pigment,bacterial strains isolated are appointed in Aeromonas genus, Aeromonas salmonicida species, achromogenessubspecies. By sensitiveness test in different medicine substances, using antibiogram technique, bacterial strainsisolated from pesthole are sensitive in a decreasing order to: nalidixic acid, oxitetracycline, florfenicol andeurofloxacin and resistant to ampicyline, amoxiclav and colistin.

  19. Elevated Genetic Diversity in an F2:6 Population of Quinoa (Chenopodium quinoa) Developed through an Inter-ecotype Cross.

    Science.gov (United States)

    Benlhabib, Ouafae; Boujartani, Noura; Maughan, Peter J; Jacobsen, Sven E; Jellen, Eric N

    2016-01-01

    Quinoa (Chenopodium quinoa) is a seed crop of the Andean highlands and Araucanian coastal regions of South America that has recently expanded in use and production beyond its native range. This is largely due to its superb nutritional value, consisting of protein that is rich in essential amino acids along with vitamins and minerals. Quinoa also presents a remarkable degree of tolerance to saline conditions, drought, and frost. The present study involved 72 F2:6 recombinant-inbred lines and parents developed through hybridization between highland (0654) and coastal (NL-6) germplasm groups. The purpose was to characterize the quinoa germplasm developed, to assess the discriminating potential of 21 agro-morpho-phenological traits, and to evaluate the extent of genetic variability recovered through selfing. A vast amount of genetic variation was detected among the 72 lines evaluated for quantitative and qualitative traits. Impressive transgressive segregation was measured for seed yield (22.42 g/plant), while plant height and maturity had higher heritabilities (73 and 89%, respectively). Other notable characters segregating in the population included panicle and stem color, panicle form, and resistance to downy mildew. In the Principal Component analysis, the first axis explained 74% of the total variation and was correlated to plant height, panicle size, stem diameter, biomass, mildew reaction, maturation, and seed yield; those traits are relevant discriminatory characters. Yield correlated positively with panicle length and biomass. Unweighted Pair Group Method with Arithmetic Mean-based cluster analysis identified three groups: one consisting of late, mildew-resistant, high-yielding lines; one having semi-late lines with intermediate yield and mildew susceptibility; and a third cluster consisting of early to semi-late accessions with low yield and mildew susceptibility. This study highlighted the extended diversity regenerated among the 72 accessions and helped to

  20. Transfer of elements relevant to nuclear fuel cycle from soil to boreal plants and animals in experimental meso- and microcosms

    Energy Technology Data Exchange (ETDEWEB)

    Tuovinen, Tiina S., E-mail: tiina.tuovinen@uef.fi [Department of Environmental Science, University of Eastern Finland, P.O. Box 1627, FI-70211 Kuopio (Finland); Kasurinen, Anne; Häikiö, Elina [Department of Environmental Science, University of Eastern Finland, P.O. Box 1627, FI-70211 Kuopio (Finland); Tervahauta, Arja [Department of Biology, University of Eastern Finland, P.O. Box FI-70211, Kuopio (Finland); Makkonen, Sari; Holopainen, Toini; Juutilainen, Jukka [Department of Environmental Science, University of Eastern Finland, P.O. Box 1627, FI-70211 Kuopio (Finland)

    2016-01-01

    Uranium (U), cobalt (Co), molybdenum (Mo), nickel (Ni), lead (Pb), thorium (Th) and zinc (Zn) occur naturally in soil but their radioactive isotopes can also be released into the environment during the nuclear fuel cycle. The transfer of these elements was studied in three different trophic levels in experimental mesocosms containing downy birch (Betula pubescens), narrow buckler fern (Dryopteris carthusiana) and Scandinavian small-reed (Calamagrostis purpurea ssp. Phragmitoides) as producers, snails (Arianta arbostorum) as herbivores, and earthworms (Lumbricus terrestris) as decomposers. To determine more precisely whether the element uptake of snails is mainly via their food (birch leaves) or both via soil and food, a separate microcosm experiment was also performed. The element uptake of snails did not generally depend on the presence of soil, indicating that the main uptake route was food, except for U, where soil contact was important for uptake when soil U concentration was high. Transfer of elements from soil to plants was not linear, i.e. it was not correctly described by constant concentration ratios (CR) commonly applied in radioecological modeling. Similar nonlinear transfer was found for the invertebrate animals included in this study: elements other than U were taken up more efficiently when element concentration in soil or food was low. - Highlights: • We studied transfer of elements in boreal food chain using meso- and microcosms. • Elements related to nuclear fuel cycle and mining were examined. • Higher uptake at lower soil concentrations was observed for primary producers. • Snails took up elements mainly from food but for U also soil was an element source. • Non-linear transfer of essential elements was observed for herbivore and decomposer.

  1. Silencing of the major family of NBS-LRR-encoding genes in lettuce results in the loss of multiple resistance specificities.

    Science.gov (United States)

    Wroblewski, Tadeusz; Piskurewicz, Urszula; Tomczak, Anna; Ochoa, Oswaldo; Michelmore, Richard W

    2007-09-01

    The RGC2 gene cluster in lettuce (Lactuca sativa) is one of the largest known families of genes encoding nucleotide binding site-leucine-rich repeat (NBS-LRR) proteins. One of its members, RGC2B, encodes Dm3 which determines resistance to downy mildew caused by the oomycete Bremia lactucae carrying the cognate avirulence gene, Avr3. We developed an efficient strategy for analysis of this large family of low expressed genes using post-transcriptional gene silencing (PTGS). We transformed lettuce cv. Diana (carrying Dm3) using chimeric gene constructs designed to simultaneously silence RGC2B and the GUS reporter gene via the production of interfering hairpin RNA (ihpRNA). Transient assays of GUS expression in leaves accurately predicted silencing of both genes and were subsequently used to assay silencing in transgenic T(1) plants and their offspring. Levels of mRNA were reduced not only for RGC2B but also for all seven diverse RGC2 family members tested. We then used the same strategy to show that the resistance specificity encoded by the genetically defined Dm18 locus in lettuce cv. Mariska is the result of two resistance specificities, only one of which was silenced by ihpRNA derived from RGC2B. Analysis of progeny from crosses between transgenic, silenced tester stocks and lettuce accessions carrying other resistance genes previously mapped to the RGC2 locus indicated that two additional resistance specificities to B. lactucae, Dm14 and Dm16, as well as resistance to lettuce root aphid (Pemphigus bursarius L.), Ra, are encoded by RGC2 family members.

  2. Evaluarea rezistenţei unor genotipuri de floarea-soarelui la mană şi rugină în condiţii naturale de infectare

    Directory of Open Access Journals (Sweden)

    Aliona CUCEREAVÎI

    2017-12-01

    Full Text Available In field experiments conducted in 2013-2014 sunflower breeding material (maternal and paternal lines of different origin and hybrids from the collection of the company “AMG-Agroselect Comert” (Republic of Moldova were evaluated for their resistance to natural infection by downy mildew (Plasmopara halstedii and rust (Puccinia helianthi. During the experiments the number of attacked plants and the percentage of attack per plant were recorded as well as disease frequency and intensity and the degree of disease attack were calculated. The data of the field observations were correlated with the results of the molecular studies on the presence or absence of downy mildew and rust resistance genes (Pl6, Pl5/8 and R1, which were performed previously. Thus, the genotypes which contain Pl6, Pl5/8 genes were not infected at all or exhibited an insignificant level of infection by Plasmopara halstedii (maximum 2.4%. The infection by Puccinia helianthi was detected in all maternal lines with cytoplasmic male sterility which lack rust resistance gene (R1. The degree of attack ranged from 0.1 to 93.5%. The paternal lines and the hybrids that possess R1 gene were not attacked by the pathogen. The established correlations denote the effectiveness of molecular screening in rapid and accurate evaluation of the material used in plant breeding and of the obtained hybrids. The native MS-2570C line (adapted to the pedoclimate and cultivation conditions specific to the region and characterized by a low degree of attack or the complete lack thereof is of a particular interest to plant breeding programs as a source of downy mildew and rust resistance. Rezumat.În experienţe de câmp realizate în a. 2013-2014 s-a testat materialul de ameliorare (linii materne şi paterne de provenienţă diferită şi unii hibrizi de floarea-soarelui din colecţia companiei „AMG-Agroselect Comerţ” în scopul evaluării rezistenţei la infecţia naturală cu mană (Plasmopara

  3. Progress on the Magnetic Trapping of Ultra-cold Neutrons

    Science.gov (United States)

    Doyle, John M.

    1998-04-01

    Ultra-cold neutrons (UCN) have been instrumental in making improved measurements of the neutron beta-decay lifetime and in searches for a permanent electric dipole moment.(R. Golub, D. Richardson and S.K. Lamoreaux, Ultra-cold Neutrons), Adam Hilger, 1991 The most accurate experiments have taken place using in-core devices at ILL (Grenoble, France) and PNPI (St. Petersburg, Russia). Superthermal techniques offer the promise of high-density sources of UCN via scattering of cold neutrons. Cold neutron beams are available at many neutron facilities. We are currently working on the development of a superfluid helium UCN source using the Cold Neutron Research Facility at the NIST Research Reactor (Gaithersburg) . Our first experiment plans to use superthermal scattering of neutrons in superfluid helium to produce UCN within a magnetic trapping volume. A magnetic trap 30 cm long and 4 cm diameter will be filled with helium at about 100 mK. Cold neutrons (around 11 K) will be introduced into the trapping region where some of them scatter to low enough energies (around 1 mK) so that they are magnetically trapped. Once trapped the UCN travel undisturbed; they have a very small probability of upscattering. Detection will be accomplished as the UCN beta-decay. The resultant high-energy electron creates excited molecular helium dimers, a portion which decay in less than 10 ns and emit radiation in the XUV (50-100 nm). We have developed techniques to measure these scintillations. Analysis indicates that a high accuracy measurement of the neutron beta decay lifetime should be possible using our techniques. An apparatus has been constructed and initial runs are underway. An overview of the experiment, discussion of systematic errors and recent experimental progress will be presented. This work is done in collaboration with C. Brome, J. Butterworth, S. Dzhosyuk, P. Huffman, C. Mattoni, D. McKinsey, M. Cooper, G. Greene, S. Lamoreaux, R. Golub, K. Habicht, K. Coakley, S. Dewey, D

  4. Latitudinal variations in intermediate depth ventilation and biological production over northeastern Pacific Oxygen Minimum Zones during the last 60 ka

    Science.gov (United States)

    Cartapanis, Olivier; Tachikawa, Kazuyo; Bard, Edouard

    2012-10-01

    Mechanisms affecting past variability in the Oxygen Minimum Zone (OMZ) in the Eastern Tropical North Pacific (ETNP) are poorly known. We analyzed core MD02-2524, obtained from the Nicaragua Margin in the present ETNP OMZ for major and minor elements (titanium (Ti), brome (Br), silicon (Si), potassium (K), and calcium (Ca)) using an X-ray Fluorescence (XRF) core scanner, and redox-sensitive trace elements (uranium (U), molybdenum (Mo), and nickel (Ni)) determined by ICP-MS. The U and Mo content was higher during the deglaciation than during the Holocene and the last glacial maximum, whereas enrichment was not observed for Ni, an element closely associated with organic matter. High-resolution XRF scanning indicated that the Ca-based carbonate content had millennial-scale variability inversely correlated with Br-based organic matter and Si/K-based opal content during the last glacial period. The available data suggest no clear regional trend in biological productivity during the last deglaciation, but significant local variability in the coastal eastern equatorial Pacific. The trace element enrichment and the lack of a concomitant increase in biogenic phases indicated that an enhanced ETNP OMZ, at least between 15°N and 12°N at a water depth of 500-900 m, was principally caused by a reduced oxygen supply driven by oceanic circulation to the Nicaragua Basin during the deglaciation. The observed patterns can be interpreted as the distinct changes in the oxygenation state of northern and southern water masses at intermediate depths. We also found evidence for a decoupling between local productivity and pore water oxygenation for several millennial-scale events during Marine Isotopic Stage 3, indicating that remote oxygen consumption and/or oceanic ventilation impacted OMZ intensity. Multi-millennial scale variations of the productivity at Papagayo upwelling cell displayed an opposite trend from productivity at the Costa Rica Dome, in relation with the latitudinal shift

  5. Contrasting patterns of groundwater evapotranspiration in grass and tree dominated riparian zones of a temperate agricultural catchment

    Science.gov (United States)

    Satchithanantham, Sanjayan; Wilson, Henry F.; Glenn, Aaron J.

    2017-06-01

    Consumptive use of shallow groundwater by phreatophytic vegetation is a significant part of the water budget in many regions, particularly in riparian areas. The influence of vegetation type on groundwater level fluctuations and evapotranspiration has rarely been quantified for contrasting plant communities concurrently although it has implications for downstream water yield and quality. Hourly groundwater evapotranspiration (ETG) rates were estimated for grass and tree riparian vegetation in southwestern Manitoba, Canada using two modified White methods. Groundwater table depth was monitored in four 21 m transects of five 3 m deep monitoring wells in the riparian zone of a stream reach including tree (Acer negundo; boxelder) and grass (Bromus inermis; smooth brome) dominated segments. The average depths to the groundwater table from the surface were 1.4 m and 1 m for the tree and grass segments, respectively, over the two-year study. During rain free periods of the growing season ETG was estimated for a total of 70 days in 2014 and 79 days in 2015 when diurnal fluctuations were present in groundwater level. Diurnal groundwater level fluctuations were observed during dry periods under both segments, however, ETG was significantly higher (p < 0.001) under trees compared to grass cover in 2014 (a wet year with 72% higher than normal growing season precipitation) and 2015 (a drier year with 15% higher than normal growing season precipitation). The two methods used to estimate ETG produced similar daily and seasonal values for the two segments. In 2014, total ETG was approximately 50% (148 mm) and 100% (282-285 mm) of reference evapotranspiration (ETref, 281 mm) for the grass and tree segments, respectively. In 2015, total ETG was approximately 40% (106-127 mm) and 120% (369-374 mm) of ETref (307 mm) for the grass and tree segments, respectively. Results from the study show the tree dominated portions of the stream reach consumed approximately 2.4 ML ha-1 yr-1 more

  6. Development of a regional-scale pollen emission and transport modeling framework for investigating the impact of climate change on allergic airway disease

    Science.gov (United States)

    Zhang, R.; Duhl, T.; Salam, M. T.; House, J. M.; Flagan, R. C.; Avol, E. L.; Gilliland, F. D.; Guenther, A.; Chung, S. H.; Lamb, B. K.; VanReken, T. M.

    2014-03-01

    Exposure to bioaerosol allergens such as pollen can cause exacerbations of allergenic airway disease (AAD) in sensitive populations, and thus cause serious public health problems. Assessing these health impacts by linking the airborne pollen levels, concentrations of respirable allergenic material, and human allergenic response under current and future climate conditions is a key step toward developing preventive and adaptive actions. To that end, a regional-scale pollen emission and transport modeling framework was developed that treats allergenic pollens as non-reactive tracers within the coupled Weather Research and Forecasting Community Multiscale Air Quality (WRF/CMAQ) modeling system. The Simulator of the Timing and Magnitude of Pollen Season (STaMPS) model was used to generate a daily pollen pool that can then be emitted into the atmosphere by wind. The STaMPS is driven by species-specific meteorological (temperature and/or precipitation) threshold conditions and is designed to be flexible with respect to its representation of vegetation species and plant functional types (PFTs). The hourly pollen emission flux was parameterized by considering the pollen pool, friction velocity, and wind threshold values. The dry deposition velocity of each species of pollen was estimated based on pollen grain size and density. An evaluation of the pollen modeling framework was conducted for southern California (USA) for the period from March to June 2010. This period coincided with observations by the University of Southern California's Children's Health Study (CHS), which included O3, PM2.5, and pollen count, as well as measurements of exhaled nitric oxide in study participants. Two nesting domains with horizontal resolutions of 12 and 4 km were constructed, and six representative allergenic pollen genera were included: birch tree, walnut tree, mulberry tree, olive tree, oak tree, and brome grasses. Under the current parameterization scheme, the modeling framework tends to

  7. Negative impacts of invasive plants on conservation of sensitive desert wildlife

    Science.gov (United States)

    Drake, K. Kristina; Bowen, Lizabeth; Nussear, Kenneth E.; Esque, Todd C.; Berger, Andrew J.; Custer, Nathan; Waters, Shannon C.; Johnson, Jay D.; Miles, A. Keith; Lewison, Rebecca L.

    2016-01-01

    . rubens, indicating potential greater susceptibility to disease or other health-related problems. This study highlights the negative indirect effects of invasive grasses, such as red brome, in desert ecosystems, and provides definitive evidence of a larger negative consequence to health, survival, and ultimately population recruitment for Mojave Desert tortoises than previously understood.

  8. Application of radioactivity to subterranean hydraulic engineering (1961); Application de la radioactivite a l'hydraulique souterraine (1961)

    Energy Technology Data Exchange (ETDEWEB)

    Hours, R [Commissariat a l' Energie Atomique, Saclay (France). Centre d' Etudes Nucleaires

    1961-07-01

    The search for radioactive tracers for water capable of percolating through permeable grounds without significant absorption has led to the choosing of two isotopes, bromine 82 (half-life 36 hours) and iodine (half-life 8 days), both {gamma} emitters; various combinations of other {gamma} emitters with longer half-lives have been tried but with only partial success. The recent progress in the dosage of tritium should make it possible to widen the field of application of this tracer which is unique in its kind. Being detectable at concentrations of 10{sup -6} to 10{sup -8} curies per cubic meter, the radioactive tracers are suitable for all the usual applications of conventional tracers; furthermore, some original techniques have been devised for measurements of flow, of reservoir capacity, of porosity and of permeability. Techniques based on the absorption and scattering of {gamma}-rays have also been developed for the measurement of the density, the humidity and the porosity of soils, and also for their analysis. Up to the present, radioactivity has been mainly applied to the study of oil-bearing formations. Furthermore, the study of the distribution of natural of thermonuclear tritium has contributed greatly to the study of the hydrological cycle. (author) [French] La recherche de traceurs radioactifs de l'eau susceptibles de circuler a travers les terrains permeables sans retention notable a abouti a la selection de deux isotopes, le brome 82 (periodes 36 heures) et l'iode (periode 8 jours), tous deux emetteurs {gamma}; diverses combinaisons mettant en jeu des emetteurs {gamma} de periode plus longue ont ete essayees, mais avec un succes partiel. Les progres recemment accomplis dans le dosage du tritium doivent permettre une rapide extension de l'emploi de ce traceur unique en son genre. Decelables a des concentrations de 10{sup -6} a 10{sup -8} curies par metre cube, les traceurs radioactifs se pretent a toutes les applications des traceurs classiques; de plus

  9. Comparison of lime and fly ash as amendments to acidic coal mine refusej growth responses and trace-element uptake of two grasses

    Energy Technology Data Exchange (ETDEWEB)

    Jasrow, J. D.; Zimmerman, C. A.; Dvorak, A. J.; Hinchman, R. R.

    1979-10-01

    Two commonly used revegetation species, Kentucky 31 tall fescue (Festuca arundinacea Schreb.) and Lincoln smooth brome (Bromus inermis Leyss.) were grown for 60 days in pots containing coarse coal mine refuse (referred to as gob, pH = 3.5) that was amended with lime or alkaline fly ash. Both species were also grown in pots containing a silt-loam surface soil as a control. Morphological growth parameters were measured over time; dry weights and shoot:root ratios were determined at harvest. Concentrations of Al, As, Cd, Co, Cr, Cu, Fe, Hg, Mn, Ni, Pb, Se, V, and Zn in the plant shoots were determined by atomic absorption spectrophotometry. Plant growth of both species was not as good on either lime- or fly ash-amended gob as it was on surface soil. Although plant height and length of the longest lead were not significantly different (p > 0.10) at the end of the experiment for plants grown on the two amended-gob substrates, parameters giving an indication of plant vigor (i.e., number of leaves and stems, width of the longest lead, and biomass) were significantly greater (p < 0.01) for plants grown on lime-amended gob than for those grown on fly ash-amended gob. Significant (p < 0.05) differences in the tissue concentrations of Cd, Co, Fe, Hg, Mn, Pb, V, and Zn were found among the plants grown on the three substrates. Except for Hg and Pb, these elements were higher in plants grown on at least one of the amended-gob substrates than in plants grown on surface soil. Significant substrate differences were not observed for Al, As, Cr, Cu, Ni, and Se. The tissue concentrations of some elements - notably Al, Cu, Fe, Mn, V, and Zn - were high enough in plants from one or more of the substrates to either approach or exceed concentrations that have been reported to be associated with toxic effects in some plant species.

  10. Tillandsia recurvata L. (Bromeliaceae: aspectos farmacognósticos

    Directory of Open Access Journals (Sweden)

    Alex Lucena de Vasconcelos

    2013-01-01

    Full Text Available A cobertura superior das florestas tropicais, formada pelas copas das árvores, constitui um ambiente de extrema diversidade vegetal. Contribuindo com a grande riqueza dessas florestas encontram-se as espécies botânicas epífitas, cuja importância pode ser observada do ponto de vista ecológico, faunístico, etnobotânico e até mesmo farmacológico. Dentre as espécies adaptadas à vida epifítica podemos citar as bromeliáceas, que compõem uma das famílias mais representativas dessa flora com elevada variabilidade genética. Tillandsia recurvata é uma espécie epífita cosmopolita, nativa, adaptada a habitats áridos, utilizada para o tratamento de diversas doenças, mas pouco se tem publicado a respeito das comprovações científicas de suas propriedades. O presente trabalho revisa os aspectos etnofarmacológicos, atividades biológicas e compostos químicos relacionados à espécie em questão, pertencente à Bromeliaceae. A partir do levantamento de dados realizado, observa-se que esta se trata de uma espécie de conhecido uso popular no tratamento de diferentes distúrbios, com alguns estudos farmacológicos que comprovam suas propriedades terapêuticas. Do ponto de vista químico observa-se a presença de terpenos, flavonoides e derivados cinâmicos em sua constituição, em que alguns compostos isolados ilustram a potencialidade desta espécie como fonte de biomoléculas de interesse. Todos estes aspectos considerados nesta revisão contribuem para o conhecimento a respeito da importância biológica e o potencial terapêutico acerca dos metabólitos desta promissora espécie.

  11. Genetic structure and diversity of the selfing model grass Brachypodium stacei (Poaceae in Western Mediterranean: out of the Iberian Peninsula and into the islands

    Directory of Open Access Journals (Sweden)

    Valeriia Shiposha

    2016-09-01

    Full Text Available Annual Mediterranean species of the genus Brachypodium are promising model plants for energy crops since their selfing nature and short-life cycles are an advantage in breeding programs. The false brome, B. distachyon, has already been sequenced and new genomic initiatives have triggered the de-novo genome sequencing of its close relatives such as B. stacei, a species that was until recently mistaken for B. distachyon. However, the success of these initiatives hinges on detailed knowledge about the distribution of genetic variation within and among populations for the effective use of germplasm in a breeding program. Understanding population genetic diversity and genetic structure is also an important prerequisite for designing effective experimental populations for genomic wide studies. However, population genetic data are still limited in B. stacei. We therefore selected and amplified 10 nuclear microsatellite markers to depict patterns of population structure and genetic variation among 181 individuals from 19 populations of B. stacei occurring in its predominant range, the western Mediterranean area: mainland Iberian Peninsula, continental Balearic Islands and oceanic Canary Islands. Our genetic results support the occurrence of a predominant selfing system with extremely high levels of homozygosity across the analyzed populations. Despite the low level of genetic variation found, two different genetic clusters were retrieved, one clustering all SE Iberian mainland populations and the island of Minorca and another one grouping all S Iberian mainland populations, the Canary Islands and all Majorcan populations except one that clustered with the former group. These results, together with a high sharing of alleles (89% suggest different colonization routes from the mainland Iberian Peninsula into the islands. A recent colonization scenario could explain the relatively low levels of genetic diversity and low number of alleles found in the Canary

  12. Genetic structure and diversity of the selfing model grass Brachypodium stacei (Poaceae) in Western Mediterranean: out of the Iberian Peninsula and into the islands.

    Science.gov (United States)

    Shiposha, Valeriia; Catalán, Pilar; Olonova, Marina; Marques, Isabel

    2016-01-01

    Annual Mediterranean species of the genus Brachypodium are promising model plants for energy crops since their selfing nature and short-life cycles are an advantage in breeding programs. The false brome, B. distachyon, has already been sequenced and new genomic initiatives have triggered the de-novo genome sequencing of its close relatives such as B. stacei, a species that was until recently mistaken for B. distachyon. However, the success of these initiatives hinges on detailed knowledge about the distribution of genetic variation within and among populations for the effective use of germplasm in a breeding program. Understanding population genetic diversity and genetic structure is also an important prerequisite for designing effective experimental populations for genomic wide studies. However, population genetic data are still limited in B. stacei. We therefore selected and amplified 10 nuclear microsatellite markers to depict patterns of population structure and genetic variation among 181 individuals from 19 populations of B. stacei occurring in its predominant range, the western Mediterranean area: mainland Iberian Peninsula, continental Balearic Islands and oceanic Canary Islands. Our genetic results support the occurrence of a predominant selfing system with extremely high levels of homozygosity across the analyzed populations. Despite the low level of genetic variation found, two different genetic clusters were retrieved, one clustering all SE Iberian mainland populations and the island of Minorca and another one grouping all S Iberian mainland populations, the Canary Islands and all Majorcan populations except one that clustered with the former group. These results, together with a high sharing of alleles (89%) suggest different colonization routes from the mainland Iberian Peninsula into the islands. A recent colonization scenario could explain the relatively low levels of genetic diversity and low number of alleles found in the Canary Islands

  13. Realization of an electromagnetic isotope separator. Application to the isotopes of the mass 93 from the molybdenum and the technetium; Realisation d'un separateur electromagnetique d'isotope. Application a l'etude des isotopes de masse 93 du molybdene et du technetium

    Energy Technology Data Exchange (ETDEWEB)

    Bernas, R [Commissariat a l' Energie Atomique, Saclay (France). Centre d' Etudes Nucleaires

    1954-07-15

    Analysis of focusing properties of a homogeneous magnetic field leads the author to use a magnetic sector of 60 deg, for the realization of an electromagnetic separator. The sources of realized ions provide ionic debits of 10 mA. The currents ionic detached isotopes to the collector vary from 1 to 5 mA. The separation efficiency is of 125 for a current collected of 1 mA. A survey of the neutralization of the space charge permitted to specify the role of the negative ions in this phenomenon. A method of neutralization of the space charge is proposed and gave excellent results. A report will be given of the separations of some elements: mercury, bromine, thorium, etc... The application of the separator to the study of the isomeric transfers in the molybdenum and the technetium permitted to assign definitely for {sup 93}Mo and {sup 93}Tc two radiances {gamma} of respective energies 260 and 390 keV. A new process of fast chemical separation Mo/Tc is described. (author) [French] L'analyse des proprietes de focalisation d'un champ magnetique homogene conduit l'auteur, pour la realisation d'un separateur electromagnetique, a employer un secteur magnetique de 60 deg. Les sources d'ions realisees fournissent des debits ioniques de 10 mA. Les courants ioniques d'isotopes separes au collecteur varient de 1 a 5 mA. Le pouvoir separateur est de 125 pour un courant collecte de 1 mA. Une etude de la neutralisation de la charge d'espace a permis de preciser le role des ions negatifs dans ce phenomene. Une methode de neutralisation de la charge d'espace est proposee et a donne d'excellents resultats. On donne le compte rendu des separations de quelques elements: mercure, brome, thorium, etc... L'application du separateur a l'etude des translations isomeriques dans le molybdene et le technetium a permis d'attribuer definitivement a {sup 93}Mo et a {sup 93}Tc deux rayonnements {gamma} d'energies respectives 260 et 390 keV. Un nouveau procede de separation chimique rapide Mo c est

  14. Realization of an electromagnetic isotope separator. Application to the isotopes of the mass 93 from the molybdenum and the technetium; Realisation d'un separateur electromagnetique d'isotope. Application a l'etude des isotopes de masse 93 du molybdene et du technetium

    Energy Technology Data Exchange (ETDEWEB)

    Bernas, R. [Commissariat a l' Energie Atomique, Saclay (France). Centre d' Etudes Nucleaires

    1954-07-15

    Analysis of focusing properties of a homogeneous magnetic field leads the author to use a magnetic sector of 60 deg, for the realization of an electromagnetic separator. The sources of realized ions provide ionic debits of 10 mA. The currents ionic detached isotopes to the collector vary from 1 to 5 mA. The separation efficiency is of 125 for a current collected of 1 mA. A survey of the neutralization of the space charge permitted to specify the role of the negative ions in this phenomenon. A method of neutralization of the space charge is proposed and gave excellent results. A report will be given of the separations of some elements: mercury, bromine, thorium, etc... The application of the separator to the study of the isomeric transfers in the molybdenum and the technetium permitted to assign definitely for {sup 93}Mo and {sup 93}Tc two radiances {gamma} of respective energies 260 and 390 keV. A new process of fast chemical separation Mo/Tc is described. (author) [French] L'analyse des proprietes de focalisation d'un champ magnetique homogene conduit l'auteur, pour la realisation d'un separateur electromagnetique, a employer un secteur magnetique de 60 deg. Les sources d'ions realisees fournissent des debits ioniques de 10 mA. Les courants ioniques d'isotopes separes au collecteur varient de 1 a 5 mA. Le pouvoir separateur est de 125 pour un courant collecte de 1 mA. Une etude de la neutralisation de la charge d'espace a permis de preciser le role des ions negatifs dans ce phenomene. Une methode de neutralisation de la charge d'espace est proposee et a donne d'excellents resultats. On donne le compte rendu des separations de quelques elements: mercure, brome, thorium, etc... L'application du separateur a l'etude des translations isomeriques dans le molybdene et le technetium a permis d'attribuer definitivement a {sup 93}Mo et a {sup 93}Tc deux rayonnements {gamma} d'energies respectives 260 et 390

  15. Chemical Effects of Nuclear Recoil in Organic Halide Systems: A New Theoretical Treatment and Experimental Verification of the Theory; Effets Chimiques du Recul Nucleaire dans des Systemes Organiques Halogenes: Nouveau Traitement Theorique et Verification Experimentale de la Theorie; Khimicheskie vozdejstviya yadernoj otdachi v organicheskikh galoidnykh sistemakh: novoe teoreticheskoe tolkovanie i ehksperimental'noe podtverzhdenie teorii; Efectos Quimicos del Retroceso Nuclear en Sistemas de Haluros Organicos: Nuevo Tratamiento Teorico y Verificacion Experimental de la Teoria

    Energy Technology Data Exchange (ETDEWEB)

    Kontis, S. S.; Sanitwongs, P.; Weston, M. [Londonderry Laboratory for Radiochemistry, University of Durham, Durham (United Kingdom)

    1965-04-15

    mecanisme de la 'boule de billard' pour le marquage par l'atome chaud, auquel Libby a donne son nom, et les retentions sont exprimees en fonction de deux types de parametres, savoir: 1. la probabilite que le choc entre un atome chaud de radiohalogene et une molecule donnee determine la retention de l'atome chaud dans cette molecule; 2. les limites superieure et inferieure des energies pour lesquelles un atome de brome est dit chaud. Les auteurs montrent comment le premier type de parametre peut etre derive d'experiences sur des melanges binaires d'un halogenure organique et de l'halogene libre correspondant; le second type de parametre doit etre deduit des constantes nucleaires et chimiques. Des etudes sur les systemes C{sub 2}H{sub 5}Br/CCl{sub 4}/Br{sub 2} et C{sub 2}H{sub 5}Br/C{sub 6}H{sub 5}Br/Br{sub 2} ont permis de faire l'essai de ces methodes. Les valeurs de retention calculees (en Utilisant des parametres derives d'etudes des systemes C{sub 2}H{sub 5}Br/Br{sub 2}, CCl{sub 4}/Br{sub 2} et C{sub 6}H{sub 5}Br/Br{sub 2}) concordent avec celles qui sont determinees experimentalement dans des melanges ou la fraction molaire de brome est superieure a 0,1 environ. Par consequent, les auteurs considerent que le mecanisme Libby permet d'expliquer les retentions organiques observees dans ces melanges. Lorsque la fraction molaire de brome devient inferieure a 0,1, les retentions observees augmentent progressivement par rapport aux valeurs calculees, ce qui est sans doute du au fait que d'autres modes de marquage par l'atome chaud interviennent lorsque la concentration en brome n'est pas assez elevee pour assurer un bon 'balayage' des radicaux. (author) [Spanish] Los autores elaboraron metodos para calcular la probable retencion organica de los halogenos radiactivos despues de activar con neutrones mezclas de dos haluros organicos y el correspondiente halogeno libre; Los metodos se basan en la teoria del proceso de ' bolas de billar ' de Hbby para la marcacion con atomos

  16. Vegetation changes over 12 years in ungrazed and grazed Conservation Reserve Program Grasslands in the central and southern plains

    Science.gov (United States)

    Cade, Brian S.; Vandever, Mark W.; Allen, Arthur W.; Terrell, James W.

    2005-01-01

    years. The species of grass established in seeded grasslands can have a major influence on the potential quality of wildlife habitat where vegetation is maintained over a multi-year period. Different species of grass may have comparable abilities to alleviate soil erosion but furnish dissimilar qualities of wildlife habitat (fig. 1). For example, smooth brome, an introduced cool-season grass (grass species and scientific names are presented in table 1), is highly valued for its erosion control and forage attributes (Casler and Carlson, 1995). Switchgrass, a native warm-season grass, also is valued for its soil and water conservation qualities (Moser and Vogel, 1995) but provides greater benefits for some species of wildlife (Clubine, 1995). The quality of nesting and winter cover for ring-necked pheasants (Phasianus colchicus) furnished by smooth brome on northeastern Colorado CRP lands is inferior to that provided by the taller, more robust switchgrass (Allen, 1994). Characteristics of the agricultural landscape surrounding individual CRP fields also play a role in the wildlife habitat potential of CRP plantings (Weber and others, 2002; Nusser and others, 2004). of native and seeded grasslands change in response to the presence (and absence) of physical disturbances such as fire, grazing, tillage, and haying (Hobbs and Huenneke, 1992; Millenbah and others, 1996; Allen and others, 2001; Renfrew and Ribic, 2001; Swengel and Swengel, 2001). The perpetuation of diversity in species composition and vegetation structure following disturbance sustains desirable habitat for a variety of grassland-dependent wildlife (Hall and Willig, 1994; Barnes and others, 1995; King and Savidge, 1995; Granfors and others, 1996; Herkert and others, 1996; Kurzejeski, 1996; Patterson and Best, 1996; Klute and others, 1997). Undisturbed grasslands have lower grass and forb species diversity, greater amounts of dead plant material, decreased as well as seasonally delayed productivity, and

  17. Current floristic and phytogeographic knowledge of Mexican Bromeliaceae

    Directory of Open Access Journals (Sweden)

    Adolfo Espejo Serna

    1998-09-01

    the fact that there is a lack of sufficient collections; however, we suppose that several species are surely endangered.Se presenta el estado del conocimiento florístico-fitogeográfico que se tiene actualmente sobre los representantes silvestres de la familia Bromeliaceae para México. Hasta el momento se tienen registrados a nivel nacional 22 géneros representados por 326 especies. Ursulaea género con 2 especies es endémico al país, en tanto que Hechtia tiene su centro principal de radiación en México, ya que 48 de sus 50 especies se presentan en la República Mexicana, siendo 43 de ellas, (91.5 %, endémicas. Los géneros con mayor número de especies son Tillandsia (175 spp, Hechtia (48 spp y Pitcairnia (46 spp. Se presenta un análisis comparativo de las Bromeliáceas mexicanas con las de otras regiones de América, con base en tratamientos para la familia recientemente publicados, particularmente para el área mesoamericana, Venezuela, Ecuador y las Guyanas. Los resultados de dicho análisis nos permiten concluir que la flora bromeliológica presente en cada área es distinta y que se observa un decremento en el valor del índice de Simpson en relación con la lejanía de las áreas con respecto a México. Asimismo el análisis general de las especies presentes en los diversos tipos de vegetación, muestra una clara preferencia de las mismas por los bosques de coníferas y de encinos seguidos por los bosques tropicales caducifolios. También es significativa su representación en otros tipos de vegetación como los bosques mesófilos y los bosques tropicales perennifolios. Generalmente las especies de Bromeliáceas mexicanas presentan poblaciones escasas y esparcidas y en muchos casos se las encuentra en riscos y acantilados en áreas muy restringidas. En lo relativo a la distribución geográfica de los géneros mexicanos, el 77.27 % son neotropicales, el 4.54 % son sudamericanos y el porcentaje restantes pertence a taxa mexicanos y centroamericanos. El

  18. Продуктивность костреца безостого в зависимости от внекорневой подкормки

    Directory of Open Access Journals (Sweden)

    СЕРЕВЕТНИК Е. В.

    2016-06-01

    Full Text Available This paper presents the results of three-year research regarding the influence of the dates and dose of foliar fertilization using the organic microfertilizer Ekogreyn on the seed yield of smooth brome grass (variety Mars. According to the research results, it was found out that the organic microfertilizer Ekogreyn has a positive effect on the growth and development of plants of smooth brome grass, as well as on the levelof their productivity. The best indicators of seed yield were recorded by the experimental variant, as it undergone two foliar fertilizations using the organic microfertilizer Ekogreyn in the phase of stem elongation (1,3 l/ha-1 and earing (1,3 l/ha combined with the application of the basic fertilizer N60 P45 K45. The level of seed productivity in this variant was of 300 kg/ha, which is by 134 kg/ha or 80.4% more than in the variant without foliar fertilization (control variant. Реферат. Изложены результаты трехлетних исследований влияния срока и нормы внесения внекорневой подкормки органическим микроудобрением Екогрейн на урожайность семян костреца безостого сорта Марс. По результатам исследований выявлено, что органическое микроудобрение Екогрейн положительно влияло на рост и развитие растений костреца безостого, а также на уровень урожайности данной культуры. Наилучшие показатели урожайности семян костреца были отмечены на варианте опыта, где проводили две внекорневые подкормки в фазе выхода в трубку (1,3 л/га и колошения (1,3 л/га на фоне

  19. Concentrations and fluxes of isoprene and oxygenated VOCs at a French Mediterranean oak forest

    International Nuclear Information System (INIS)

    Kalogridis, C.; Gros, V.; Sarda-Esteve, R.; Bonsang, B.; Bonnaire, N.; Boissard, C.; Baisnee, D.; Lathiere, J.

    2014-01-01

    The CANOPEE project aims to better understand the biosphere-atmosphere exchanges of biogenic volatile organic compounds (BVOCs) in the case of Mediterranean ecosystems and the impact of in-canopy processes on the atmospheric chemical composition above the canopy. Based on an intensive field campaign, the objective of our work was to determine the chemical composition of the air inside a canopy as well as the net fluxes of reactive species between the canopy and the boundary layer. Measurements were carried out during spring 2012 at the field site of the Oak Observatory of the Observatoire de Haute Provence (O3HP) located in the southeast of France. The site is a forest ecosystem dominated by downy oak, Quercus pubescens Willd., a typical Mediterranean species which features large isoprene emission rates. Mixing ratios of isoprene, its degradation products methylvinylketone (MVK) and methacrolein (MACR) and several other oxygenated VOC (OxVOC) were measured above the canopy using an online proton transfer reaction mass spectrometer (PTR-MS), and fluxes were calculated by the disjunct eddy covariance approach. The O3HP site was found to be a very significant source of isoprene emissions, with daily maximum ambient concentrations ranging between 2-16 ppbv inside and 2-5 ppbv just above the top of the forest canopy. Significant isoprene fluxes were observed only during daytime, following diurnal cycles with midday net emission fluxes from the canopy ranging between 2.0 and 9.7 mgm -2 h -1 . Net isoprene normalized flux (at 30 C, 1000 μmol quantam -2 s -1 ) was estimated at 7.4 mgm -2 h -1 . Evidence of direct emission of methanol was also found exhibiting maximum daytime fluxes ranging between 0.2 and 0.6 mgm -2 h -1 , whereas flux values for monoterpenes and others OxVOC such as acetone and acetaldehyde were below the detection limit. The MVK+MACR-to-isoprene ratio provided useful information on the oxidation of isoprene, and is in agreement with recent findings

  20. Resistance to Plasmopara viticola in a grapevine segregating population is associated with stilbenoid accumulation and with specific host transcriptional responses

    Directory of Open Access Journals (Sweden)

    Delledonne Massimo

    2011-08-01

    Full Text Available Abstract Background Downy mildew, caused by the oomycete Plasmopara viticola, is a serious disease in Vitis vinifera, the most commonly cultivated grapevine species. Several wild Vitis species have instead been found to be resistant to this pathogen and have been used as a source to introgress resistance into a V. vinifera background. Stilbenoids represent the major phytoalexins in grapevine, and their toxicity is closely related to the specific compound. The aim of this study was to assess the resistance response to P. viticola of the Merzling × Teroldego cross by profiling the stilbenoid content of the leaves of an entire population and the transcriptome of resistant and susceptible individuals following infection. Results A three-year analysis of the population's response to artificial inoculation showed that individuals were distributed in nine classes ranging from total resistance to total susceptibility. In addition, quantitative metabolite profiling of stilbenoids in the population, carried out using HPLC-DAD-MS, identified three distinct groups differing according to the concentrations present and the complexity of their profiles. The high producers were characterized by the presence of trans-resveratrol, trans-piceid, trans-pterostilbene and up to thirteen different viniferins, nine of them new in grapevine. Accumulation of these compounds is consistent with a resistant phenotype and suggests that they may contribute to the resistance response. A preliminary transcriptional study using cDNA-AFLP selected a set of genes modulated by the oomycete in a resistant genotype. The expression of this set of genes in resistant and susceptible genotypes of the progeny population was then assessed by comparative microarray analysis. A group of 57 genes was found to be exclusively modulated in the resistant genotype suggesting that they are involved in the grapevine-P. viticola incompatible interaction. Functional annotation of these transcripts