WorldWideScience

Sample records for sargasso sea strain

  1. Teaching Wide Sargasso Sea in New Jersey

    Science.gov (United States)

    Jolley, Susan Arpajian

    2005-01-01

    High school teacher Susan Arpajian Jolley emphasizes experience and understanding by using the related novels "Wide Sargasso Sea" and "Jane Eyre" to help her students travel into unfamiliar cultural territory. "Wide Sargasso Sea" relates to Caribbean history and culture, feminism, race relations, colonialism, and personal identity.

  2. Teaching Wide Sargasso Sea in New Jersey

    Science.gov (United States)

    Jolley, Susan Arpajian

    2005-01-01

    High school teacher Susan Arpajian Jolley emphasizes experience and understanding by using the related novels "Wide Sargasso Sea" and "Jane Eyre" to help her students travel into unfamiliar cultural territory. "Wide Sargasso Sea" relates to Caribbean history and culture, feminism, race relations, colonialism, and…

  3. Mimivirus relatives in the Sargasso sea

    Directory of Open Access Journals (Sweden)

    Claverie Jean-Michel

    2005-08-01

    Full Text Available Abstract The discovery and genome analysis of Acanthamoeba polyphaga Mimivirus, the largest known DNA virus, challenged much of the accepted dogma regarding viruses. Its particle size (>400 nm, genome length (1.2 million bp and huge gene repertoire (911 protein coding genes all contribute to blur the established boundaries between viruses and the smallest parasitic cellular organisms. Phylogenetic analyses also suggested that the Mimivirus lineage could have emerged prior to the individualization of cellular organisms from the three established domains, triggering a debate that can only be resolved by generating and analyzing more data. The next step is then to seek some evidence that Mimivirus is not the only representative of its kind and determine where to look for new Mimiviridae. An exhaustive similarity search of all Mimivirus predicted proteins against all publicly available sequences identified many of their closest homologues among the Sargasso Sea environmental sequences. Subsequent phylogenetic analyses suggested that unknown large viruses evolutionarily closer to Mimivirus than to any presently characterized species exist in abundance in the Sargasso Sea. Their isolation and genome sequencing could prove invaluable in understanding the origin and diversity of large DNA viruses, and shed some light on the role they eventually played in the emergence of eukaryotes.

  4. Analysis of Antoinette’s Tragedy in Wide Sargasso Sea

    Institute of Scientific and Technical Information of China (English)

    刘英波; 王丹邱

    2015-01-01

    Jean Rhys published Wide Sargasso Sea in 1966,which won her the Royal Society of Literature Award.The article explores the fac-tors contributing to the protagonist Antoinette’s tragedy,namely social factors,family factors and personal factors and demonstrates the inevitability of Antoinette’s tragedy.

  5. Eukaryotes dominate new production in the Sargasso Sea

    Science.gov (United States)

    Fawcett, S. E.; Lomas, M. W.; Ward, B. B.; Casey, J. R.; Sigman, D. M.

    2010-12-01

    The vast subtropical ocean gyres are considered unproductive “deserts” due to the extremely low concentrations of essential nutrients in their sunlit surface waters. Because of intense upper ocean stratification, phytoplankton growth in the subtropical gyres is limited by the slow supply of nitrate from below, and is assumed to be supported predominantly by “regenerated” nitrogen (N): ammonium and other reduced N sources recycled in surface waters. The phytoplankton assemblage of the subtropical Sargasso Sea is dominated by the prokaryotic cyanobacteria, Prochlorococcus and Synechococcus, which occur in very high cell numbers compared to the rarer, and usually larger, eukaryotic algae. Coupling flow cytometry and a new high-sensitivity method for N isotope analysis, we measure the 15N/14N of major phytoplankton taxa and other biologically distinct particle populations collected from the surface waters of the Sargasso Sea during the stratified summer period. We find that the cyanobacteria and eukaryotic phytoplankton show distinct N isotope signatures, indicating that they utilize different sources of N for growth. Prochlorococcus and Synechococcus have a uniformly low 15N/14N, consistent with the expectation that these phytoplankton rely on regenerated N. However, the 15N/14N of eukaryotic phytoplankton is higher and more variable, with a mean 15N/14N comparable to the new nitrate supply from below, indicating that eukaryotes dominate the consumption of this nitrate and rely on it for more than half of their N requirement. Using our measured 15N/14N values for the various sorted autotrophic populations, we calculate eukaryote-specific summer f-ratios of 0.6-0.67 and total community summer f-ratios of 0.15-0.23. These values are higher than those based on comparison of primary production and sediment-trap derived organic carbon (C) export, and agree well with annual f-ratio estimates implied by geochemical tracers. The high 15N/14N of eukaryotic biomass can

  6. Horizontal and vertical distribution of Chaetognatha in the upper 1000 m of the western Sargasso Sea and the Central and South-east Atlantic.

    Digital Repository Service at National Institute of Oceanography (India)

    Pierrot-Bultsa, A.C.; Nair, V.R.

    in the Sargasso Sea (Ron Brown Cruise) and twenty along the eastern boundary of the Atlantic (the Polarstern Cruise). Sagitta hispida and Krohnitta mutabbii were restricted to the Sargasso Sea, and Sagitta tasmanica, S. gazellae, Eukrohnia macroneura and Krohnitta...

  7. All roads lead to home: panmixia of European eel in the Sargasso Sea.

    Science.gov (United States)

    Als, Thomas D; Hansen, Michael M; Maes, Gregory E; Castonguay, Martin; Riemann, Lasse; Aarestrup, Kim; Munk, Peter; Sparholt, Henrik; Hanel, Reinhold; Bernatchez, Louis

    2011-04-01

    European eels (Anguilla anguilla) spawn in the remote Sargasso Sea in partial sympatry with American eels (Anguilla rostrata), and juveniles are transported more than 5000 km back to the European and North African coasts. The two species have been regarded as classic textbook examples of panmixia, each comprising a single, randomly mating population. However, several recent studies based on continental samples have found subtle, but significant, genetic differentiation, interpreted as geographical or temporal heterogeneity between samples. Moreover, European and American eels can hybridize, but hybrids have been observed almost exclusively in Iceland, suggesting hybridization in a specific region of the Sargasso Sea and subsequent nonrandom dispersal of larvae. Here, we report the first molecular population genetics study based on analysis of 21 microsatellite loci in larvae of both Atlantic eel species sampled directly in the spawning area, supplemented by analysis of European glass eel samples. Despite a clear East-West gradient in the overlapping distribution of the two species in the Sargasso Sea, we only observed a single putative hybrid, providing evidence against the hypothesis of a wide marine hybrid zone. Analyses of genetic differentiation, isolation by distance, isolation by time and assignment tests provided strong evidence for panmixia in both the Sargasso Sea and across all continental samples of European eel after accounting for the presence of sibs among newly hatched larvae. European eel has declined catastrophically, and our findings call for management of the species as a single unit, necessitating coordinated international conservation efforts.

  8. A Study of Displacement in Jean Rhys' Novel "Wide Sargasso Sea"

    Science.gov (United States)

    Jamal, Inna Malissa bte Che; Singh, Hardev Kaur A/P Jujar; Mani, Manimangai

    2014-01-01

    "Wide Sargasso Sea," by Jean Rhys, is a novel filled with tragedy; two characters in conflict meet in circumstances not in their best interests but rather for other people. This novel is an illustration of the mad woman in the novel "Jane Eyre," by Charlotte Bronte, as the story of her life before madness is told in the novel…

  9. Race and Gender in Jean Rhys's Wide Sargasso Sea | Samb | Lwati ...

    African Journals Online (AJOL)

    Race and Gender in Jean Rhys's Wide Sargasso Sea. ... Journal Home · ABOUT · Advanced Search · Current Issue · Archives ... Whites and Blacks refer each to the racial others using stereotypical and over generalizing discourses. ... This paper analyses as well the gender issue within the framework of the patriarchal order ...

  10. A Study of Displacement in Jean Rhys’ Novel Wide Sargasso Sea

    Directory of Open Access Journals (Sweden)

    Inna Malissa bte Che Jamal

    2014-10-01

    Full Text Available Wide Sargasso Sea, by Jean Rhys, is a novel filled with tragedy; two characters in conflict meet in circumstances not in their best interests but rather for other people. This novel is an illustration of the mad woman in the novel Jane Eyre, by Charlotte Bronte, as the story of her life before madness is told in the novel Wide Sargasso Sea. This study attempts to elucidate reasons for the feelings of displacement that the Western husband faces during his stay in the Caribbean, and also to discover to what extent the situation contribute to the oppression faced by Antoinette and imposed on her by her Western husband. There are many concepts amongst the theory of post-colonialism, e.g. otherness, hybridity, and (double alienation. This research’s approach differs slightly from some previous research that has been done on this novel, as it focuses on the husband of Antoinette as the victim.

  11. Marine Spatial Planning Applied to the High Seas - Process and Results of an Exercise Focused on the Sargasso Sea

    Science.gov (United States)

    Siuda, A. N.; Smythe, T. C.

    2016-12-01

    The Sargasso Sea, at the center of the North Atlantic gyre, is recognized by the United Nations Convention on Biological Diversity as a globally unique ecosystem threatened by anthropogenic activity. In its stewardship capacity, the Sargasso Sea Commission works within the current system of international organizations and treaties to secure protection for particular species or areas. Without a single governing authority to implement and enforce protective measures across the region, a coordinated management plan for the region is lacking. A research team comprised of 20 advanced undergraduate scientists participating in the spring 2015 SEA Semester: Marine Biodiversity and Conservation program of Sea Education Association (Woods Hole, MA) engaged in a groundbreaking simulated high seas marine spatial planning process resulting in A Marine Management Proposal for the Sargasso Sea. Based on natural and social science research, the interdisciplinary Proposal outlines goals, objectives and realistic strategies that encompass ecological, economic, human use, and future use considerations. Notably, the Proposal is the product of a classroom-based simulation intended to improve emerging scientists' understanding of how research is integrated into the policy process and how organizations work across disciplinary boundaries to address complex ocean management problems. Student researchers identified several discrete management areas and associated policy recommendations for those areas, as well as strategies for coordinated management across the entire Sargasso Sea region. The latter include establishment of a United Nations Regional Ocean Management Organization as well as provisions for monitoring and managing high seas traffic. To make progress toward these strategies, significant attention to the importance of high seas regions for global-scale conservation will be necessary.

  12. Mesoscale and Sub-mesoscale Variability in Phytoplankton Community Composition in the Sargasso Sea

    Science.gov (United States)

    Bachman, B.; Richardson, T. L.; Lomas, M. W.

    2016-02-01

    The Sargasso Sea is a highly dynamic physical environment in which strong seasonal variability combines with forcing by mesoscale ( 100 km) eddies. Over four cruises (2011 and 2012), we investigated links between water column structure, nutrient regimes, and phytoplankton community composition at a range of time and space scales in the Sargasso Sea. On all cruises, cyanobacteria (Prochlorococcus and Synechococcus) dominated the phytoplankton numerically and haptophytes were the dominant eukaryotes (up to 60% total chl-a). We demonstrated significant effects of mesoscale and inferred sub-mesoscale forcing on phytoplankton community composition. Downwelling (in anticyclones) was coincident with Prochlorococcus abundances 22-66% higher compared to outside stations. We observed a shift in the taxonomic composition of haptophytes between a coccolithophores dominated community in a cyclone in spring 2012 (C2) and a non-coccolithophore community at BATS. At the center of cyclone C1 (summer 2011), we observed significantly higher haptophyte chl-a (non-coccolithophores) and lower cyanobacteria chl-a biomass at the center and edge as compared to BATS. In summer 2012, downwelling associated with anticyclone AC2 occurred at the edge of the eddy and we found significantly lower Synechococcus abundances and higher eukaryote chl-a compared to the center of AC2 and BATS. These along-transect nuances demonstrate the significance of small-scale perturbations that significantly alter phytoplankton community structure. Therefore, while seasonality in the North Atlantic is the primary driver of broad-scale trends in phytoplankton community composition, the effect of transient events must be considered when studying planktonic food webs in the Sargasso Sea.

  13. Qualitative assessment of the diet of European eel larvae in the Sargasso Sea resolved by DNA barcoding

    DEFF Research Database (Denmark)

    Riemann, L.; Alfredsson, H.; Hansen, Michael Møller

    2010-01-01

    European eels (Anguilla anguilla) undertake spawning migrations of more than 5000 km from continental Europe and North Africa to frontal zones in the Sargasso Sea. Subsequently, the larval offspring are advected by large-scale eastward ocean currents towards continental waters. However, the Sarga......European eels (Anguilla anguilla) undertake spawning migrations of more than 5000 km from continental Europe and North Africa to frontal zones in the Sargasso Sea. Subsequently, the larval offspring are advected by large-scale eastward ocean currents towards continental waters. However...

  14. Misrepresentations of Sargasso Sea temperatures by Arthur B. Robinson et al.

    Energy Technology Data Exchange (ETDEWEB)

    Keigwin, Lloyd (Woods Hole Oceanographic Institution Woods Hole, MA); Boslough, Mark Bruce Elrick

    2010-10-01

    Keigwin (Science 274:1504-1508, 1996) reconstructed the sea surface temperature (SST) record in the northern Sargasso Sea to document natural climate variability in recent millennia. The annual average SST proxy used {delta}{sup 18}O in planktonic foraminifera in a radiocarbon-dated 1990 Bermuda Rise box core. Keigwin's Fig. 4B (K4B) shows a 50-year-averaged time series along with four decades of SST measurements from Station S near Bermuda, demonstrating that the Sargasso Sea is now at its warmest in more than 400 years, and well above the most recent box-core temperature. Taken together, Station S and paleo-temperatures suggest there was an acceleration of warming in the 20th century, though this was not an explicit conclusion of the paper. Keigwin concluded that anthropogenic warming may be superposed on a natural warming trend. In an unpublished paper circulated with the anti-Kyoto 'Oregon Petition,' Robinson et al. ('Environmental Effects of Increased Atmospheric Carbon Dioxide,' 1998) reproduced K4B but (1) omitted Station S data, (2) incorrectly stated that the time series ended in 1975, (3) conflated Sargasso Sea data with global temperature, and (4) falsely claimed that Keigwin showed global temperatures 'are still a little below the average for the past 3,000 years.' Keigwin's Fig. 2 showed that {delta}{sup 18}O has increased over the past 6000 years, so SSTs calculated from those data would have a long term decrease. Thus, it is inappropriate to compare present-day SST to a long term mean unless the trend is removed. Slight variations of Robinson et al. (1998) have been repeatedly published with different author rotations. Various mislabeled, improperly-drawn, and distorted versions of K4B have appeared in the Wall Street Journal, in weblogs, and even as an editorial cartoon-all supporting baseless claims that current temperatures are lower than the long-term mean, and traceable to Robinson's misrepresentation

  15. Mesoscale and sub-mesoscale variability in phytoplankton community composition in the Sargasso Sea

    Science.gov (United States)

    Cotti-Rausch, Bridget E.; Lomas, Michael W.; Lachenmyer, Eric M.; Goldman, Emily A.; Bell, Douglas W.; Goldberg, Stacey R.; Richardson, Tammi L.

    2016-04-01

    The Sargasso Sea is a dynamic physical environment in which strong seasonal variability combines with forcing by mesoscale (~100 km) eddies. These drivers determine nutrient, light, and temperature regimes and, ultimately, the composition and productivity of the phytoplankton community. On four cruises (2011 and 2012; one eddy per cruise), we investigated links between water column structure and phytoplankton community composition in the Sargasso at a range of time and space scales. On all cruises, cyanobacteria (Prochlorococcus and Synechococcus) dominated the phytoplankton numerically, while haptophytes were the dominant eukaryotes (up to 60% of total chl-a). There were substantial effects of mesoscale and sub-mesoscale forcing on phytoplankton community composition in both spring and summer. Downwelling (in anticyclones) resulted in Prochlorococcus abundances that were 22-66% higher than at 'outside' stations. Upwelling (in cyclones) was associated with significantly higher abundances and POC biomass of nanoeukaryotes. In general, however, each eddy had its own unique characteristics. The center of anticyclone AC1 (spring 2011) had the lowest phytoplankton biomass (chl-a) of any eddy we studied and had lower nitrate+nitrite (N+N deep mixed layer, yet had relatively low nutrient concentrations. We observed a shift in the taxonomic composition of haptophytes between a coccolithophore-dominated community in C2 (98% of total haptophyte chl-a) and a non-coccolithophore community at BATS. In summer 2012, downwelling associated with anticyclone AC2 occurred at the edge of the eddy (not at the center), where AC2 interacted with a nearby cyclone. At the edge, we found significantly lower Synechococcus abundances and higher eukaryote chl-a compared to the center of AC2 and BATS. These along-transect nuances demonstrate the significance of small-scale perturbations that substantially alter phytoplankton community structure. Therefore, while seasonality in the North

  16. Picoplankton contribution to biogenic silica stocks and production rates in the Sargasso Sea

    Science.gov (United States)

    Krause, Jeffrey W.; Brzezinski, Mark A.; Baines, Stephen B.; Collier, Jackie L.; Twining, Benjamin S.; Ohnemus, Daniel C.

    2017-05-01

    Picocyanobacteria in the Sargasso Sea accumulate significant amounts of Si, a finding which questions how we interpret previous regional measurements of biogenic silica (bSi) production and the role of diatoms in the open ocean. The picoplankton (stock and its rate of production. The 100 m integrated bSi stock and bSi production rate in the stock and bSi production in cells stocks, which is masked by a dynamic bSi pool driven by larger cells. While a significant fraction of bSi production is attributable to picoplankton, their contributions are likely to have been included in previous analyses, making prior regional budgets still relevant. However, our understanding of the factors controlling regional bSi production and our interpretations of particulate matter elemental ratios (e.g., Si:C) may require revision.

  17. Distribution and production of plankton communities in the subtropical convergence zone of the Sargasso Sea. II. Protozooplankton and copepods

    DEFF Research Database (Denmark)

    Andersen, Nikolaj G.; Nielsen, Torkel Gissel; Jakobsen, Hans Henrik

    2011-01-01

    larvae and ostracods. Most of the recorded metazoan groups responded numerically to the frontal features (i.e. the surfacing of the isotherms) with high abundance in the STCZ compared with areas north and south of this. Juvenile copepod growth and egg production peaked in the STCZ, with a weight......The oligotrophic Sargasso Sea in the western part of the North Atlantic Ocean is influenced by a complex set of oceanographic features that might introduce nutrients and enhance productivity in certain areas. To increase our understanding of the variability in plankton communities and to determine...... the potential reasons why Atlantic eels Anguilla spp. use this area for spawning, we investigated the distribution and productivity of the zooplankton community across the Subtropical Convergence Zone (STCZ) in the Sargasso Sea in March and April 2007. The vertical and horizontal distributions of protozoans...

  18. Abyssal Scavenging Communities attracted to Sargassum and fish in the Sargasso Sea

    Science.gov (United States)

    Fleury, Aharon G.; Drazen, Jeffrey C.

    2013-02-01

    Deep-sea communities rely on epipelagic surface production as a primary source of energy and food. The flux of phytodetritus drives many abyssal ecological processes but the flux of large particles such as nekton carcasses, macroalgae, and wood may also be important. Recent baited camera experiments noted that some abyssal fish consumed spinach and phytoplankton placed on the seafloor. To evaluate if fish or other scavengers would consume natural plant or macroalgal material falling to the deep-sea floor we conducted camera experiments using Sargassum or mackerel bait in the Sargasso Sea. A benthic community of invertebrates was attracted to Sargassum, which naturally falls to the seafloor in this area. In five instances it was observed that an isopod Bathyopsurus sp. removed a piece of Sargassum from the main clump and left the field of view with it. An ophiuroid is also observed handling a piece of Sargassum. The group of scavengers attracted to mackerel bait was very different and was dominated by large ophidiid fish. In contrast to studies elsewhere in the abyssal North Atlantic, only a small number of rattails are observed, which could be related to water depth or an ichthyofaunal zonal change between oligotrophic and eutrophic regions.

  19. Empirical observations of the spawning migration of European eels: The long and dangerous road to the Sargasso Sea.

    Science.gov (United States)

    Righton, David; Westerberg, Håkan; Feunteun, Eric; Økland, Finn; Gargan, Patrick; Amilhat, Elsa; Metcalfe, Julian; Lobon-Cervia, Javier; Sjöberg, Niklas; Simon, Janek; Acou, Anthony; Vedor, Marisa; Walker, Alan; Trancart, Thomas; Brämick, Uwe; Aarestrup, Kim

    2016-10-01

    The spawning migration of the European eel (Anguilla anguilla L.) to the Sargasso Sea is one of the greatest animal migrations. However, the duration and route of the migration remain uncertain. Using fishery data from 20 rivers across Europe, we show that most eels begin their oceanic migration between August and December. We used electronic tagging techniques to map the oceanic migration from eels released from four regions in Europe. Of 707 eels tagged, we received 206 data sets. Many migrations ended soon after release because of predation events, but we were able to reconstruct in detail the migration routes of >80 eels. The route extended from western mainland Europe to the Azores region, more than 5000 km toward the Sargasso Sea. All eels exhibited diel vertical migrations, moving from deeper water during the day into shallower water at night. The range of migration speeds was 3 to 47 km day(-1). Using data from larval surveys in the Sargasso Sea, we show that spawning likely begins in December and peaks in February. Synthesizing these results, we show that the timing of autumn escapement and the rate of migration are inconsistent with the century-long held assumption that eels spawn as a single reproductive cohort in the springtime following their escapement. Instead, we suggest that European eels adopt a mixed migratory strategy, with some individuals able to achieve a rapid migration, whereas others arrive only in time for the following spawning season. Our results have consequences for eel management.

  20. Qualitative assessment of the diet of European eel larvae in the Sargasso Sea resolved by DNA barcoding.

    Science.gov (United States)

    Riemann, Lasse; Alfredsson, Hanna; Hansen, Michael M; Als, Thomas D; Nielsen, Torkel G; Munk, Peter; Aarestrup, Kim; Maes, Gregory E; Sparholt, Henrik; Petersen, Michael I; Bachler, Mirjam; Castonguay, Martin

    2010-12-23

    European eels (Anguilla anguilla) undertake spawning migrations of more than 5000 km from continental Europe and North Africa to frontal zones in the Sargasso Sea. Subsequently, the larval offspring are advected by large-scale eastward ocean currents towards continental waters. However, the Sargasso Sea is oligotrophic, with generally low plankton biomass, and the feeding biology of eel larvae has so far remained a mystery, hampering understanding of this peculiar life history. DNA barcoding of gut contents of 61 genetically identified A. anguilla larvae caught in the Sargasso Sea showed that even the smallest larvae feed on a striking variety of plankton organisms, and that gelatinous zooplankton is of fundamental dietary importance. Hence, the specific plankton composition seems essential for eel larval feeding and growth, suggesting a linkage between eel survival and regional plankton productivity. These novel insights into the prey of Atlantic eels may furthermore facilitate eel larval rearing in aquaculture, which ultimately may replace the unsustainable use of wild-caught glass eels.

  1. Jean Rhys’s Wide Sargasso Sea as a Hypertext of Charlotte Bronte’s Jane Eyre: A Postmodern Perspective

    Directory of Open Access Journals (Sweden)

    Nazila Herischian

    2012-11-01

    Full Text Available This study gains significance as the findings can shed more lights on the postmodern concept of hypertextuality to show that there is no originality in literature and any literary work can be the repetition, continuation, or mixture of previous texts. In the case of this study, that is to show, how a twentieth-century literary work like Rhys’s Wide Sargasso Sea can be the parody of Brontë’s nineteenth-century novel Jane Eyre. Moreover, such a postmodern perspective widens various ways of concentration on the literary works, so that, one could interpret in what ways two texts are united and grafted which results in either parody or pastiche. This study attempts to demonstrate mostly those focused aspects in Wide Sargasso Sea and Jane Eyre that highlight the concept of hypertextuality, including the analyses of Rochester’s character in the novels, as a Byronic hero in Jane Eyre and an anti-Byronic hero in Wide Sargasso Sea; and also the study of the characters of Jane Eyre and Antoinette Cosway, as women narrator of the novels as well as focusing on the dream texts of the novels. Key words: Hypertextuality, bildungsroman, Byronic hero, parody

  2. Distribution and potential sources and sinks of copper chelators in the Sargasso Sea

    Science.gov (United States)

    Moffett, J. W.; Zika, R. G.; Brand, L. E.

    1990-01-01

    Copper speciation has been studied at an oligotrophic station in the southwestern Sargasso Sea to determine the distribution of Cu binding ligands and evaluate their potential sources and sinks. Speciation was studied using a ligand exchange/liquid-liquid partition procedure used in a previous study in Florida coastal waters [ MOFFET and ZIKA (1987a) Marine Chemistry, 21, 301-313]. Copper speciation was dominated by organic complexation at all depths studied (16-950 m). Complexation was greatest in the region of the chlorophyll maximum. In this region, speciation was dominated by two ligands or ligand classes; L 1, with K cond. = 10 13.2, concentration = 2 nM, and a weaker but more abundant ligand class, L 2 with Kincond. = 10 9.7, concentration = 80 nM. From 140 to 16 m, [Cu(II)] free/[Cu(II)] total increases by a factor of 20, due to a decrease in [L 1] to a value below the ambient Cu concentration. Exposure of water from 140 m to sunlight indicated that photochemical decomposition of L 1 may account for the decrease. Below the chlorophyll maximum there is a gradual increase in [Cu(II)] free/[Cu(II)] total suggesting that the ligands are of recent biological origin rather than derived from refractory materials. Cultures of a ubiquitous marine cyanobacterium, Synechococcus sp. produced a ligand with K cond. comparable to L 1, indicating that a biological source is plausible.

  3. Seasonal expression of the picocyanobacterial phosphonate transporter gene phnD in the Sargasso Sea

    Directory of Open Access Journals (Sweden)

    Irina N Ilikchyan

    2010-12-01

    Full Text Available In phosphorus-limited marine environments, picocyanobacteria (Synechococcus and Prochlorococcus spp. can hydrolyze naturally occurring phosphonates as a P source. Utilization of 2-aminoethylphosphonate (2-AEP is dependent on expression of the phn genes, encoding functions required for uptake and C-P bond cleavage. Prior work has indicated that expression of picocyanobacterial phnD, encoding the phosphonate binding protein of the phosphonate ABC transporter, is a proxy for the assimilation of phosphonates in natural assemblages of Synechococcus spp. and Prochlorococcus spp (Ilikchyan et al. 2009. In this study, we expand this work to assess seasonal phnD expression in the Sargasso Sea. By RT-PCR, our data confirm that phnD expression is constitutive for the Prochlorococcus spp. detected, but in Synechococcus spp., phnD transcription follows patterns of phosphorus availability in the mixed layer. Specifically, our data suggest that phnD is repressed in the spring when P is bioavailable following deep winter mixing. In the fall, phnD expression follows a depth dependent pattern reflecting depleted P at the surface following summertime drawdown, and elevated P at depth.

  4. Overestimation of heterotrophic bacteria in the Sargasso Sea: direct evidence by flow and imaging cytometry

    Science.gov (United States)

    Sieracki, Michael E.; Haugen, Elin M.; Cucci, Terry L.

    1995-08-01

    Accurate measurements of bacterial biomass in the ocean are needed for modeling marine microbial food webs and global biogeochemical cycling. We present direct evidence that previous estimates of heterotrophic bacteria biomass in the oligotrophic ocean are confounded by the presence of the abundant photosynthetic procaryote, Prochlorococcus. The chlorophyll autofluorescence of these photosynthetic bacterial cells is very faint and fades rapidly under epifluorescence microscopy. Detection and enumeration of these cells thus far has almost exclusively been by flow cytometry. Using a cooled, charge-coupled device (CCD) camera we were able to image these cells for direct biovolume measurements. A double-exposed image of DAPI-stained Prochlorococcus cells shows that they are indistinguishable from heterotrophic bacteria in standard slide preparations. At two Sargasso Sea stations Prochlorococcus could cause an overestimation of surface (top 150 m) integrated heterotrophic bacterial biovolume (biomass) of 18 and 22% determined by standard microscope methods. At the subsurface chlorophyll maximum Prochlorococcus was 33 and 43% of the heterotrophic bacterial biovolume (biomass) at these stations. Prochlorococcus cell size increased from 0.05 μm 3 in the surface mixed layer to about 0.2 μm 3 below 100 m, confirming previous interpretations of flow cytometric light scatter measurements. Shifting biomass from the heterotrophic bacteria pool to the primary producer compartment has significant implications for ecosystem structure and trophic transfer in marine food webs.

  5. Diagnosis of Physical and Biological Controls on Phytoplankton Distribution in the Sargasso Sea

    Institute of Scientific and Technical Information of China (English)

    WANG Caixia; Paola Malanotte-Rizzoli

    2014-01-01

    The linkage between physical and biological processes is studied by applying a one-dimensional physical-biological coupled model to the Sargasso Sea. The physical model is the Princeton Ocean Model and the biological model is a five-component system including phytoplankton, zooplankton, nitrate, ammonium, and detritus. The coupling between the physical and biological model is accomplished through vertical mixing which is parameterized by the level 2.5 Mellor and Yamada turbulence closure scheme. The coupled model investigates the annual cycle of ecosystem production and the response to external forcing, such as heat flux, wind stress, and surface salinity, and the relative importance of physical processes in affecting the ecosystem. Sensitivity ex-periments are also carried out, which provide information on how the model bio-chemical parameters affect the biological system. The computed seasonal cycles compare reasonably well with the observations of the Bermuda Atlantic Time-series Study (BATS). The spring bloom of phytoplankton occurs in March and April, right after the weakening of the winter mixing and before the estab-lishment of the summer stratification. The bloom of zooplankton occurs about two weeks after the bloom of phytoplankton. The sen-sitivity experiments show that zooplankton is more sensitive to the variations of biochemical parameters than phytoplankton.

  6. Upper Water Column Dimethylated Sulfur Biogeochemical Cycling in the Sargasso Sea - Assessing the Oceanic DMS Source

    Science.gov (United States)

    Toole, D. A.; Dacey, J. W.; Bates, N. R.; Levine, N. M.; Neeley, A.

    2008-12-01

    Once ventilated to the atmosphere, the oxidation products of biologically produced DMS are non sea salt sulfate and methane sulfonate aerosols which potentially exert considerable control on the global climate via alterations in radiative properties, acid-base chemistry, halogen cycles, and aerosol iron availability. The most significant obstacle to assessing and quantifying any associated climate feedbacks, beyond uncertainties associated with flux parameterizations, is the lack of understanding of the mechanisms that regulate oceanic near surface DMS concentrations. To assess the seasonal variability in the oceanic DMS source, monthly vertical profiles of DMS and particulate and dissolved DMSP (DMSPp and DMSPd) concentrations and biogeochemical cycling rates were sampled in the Sargasso Sea commencing in September 2005 at the Bermuda Atlantic Time-series Study site (BATS). Clear seasonal cycles are evident for DMS and DMSPp concentrations, although they are poorly correlated to available biomass indicators. DMSPd was consistently low and did not exhibit a clear seasonality. Biological DMS consumption is characterized by seasonal minima and maxima observed above and below the mixed layer depth respectively during strong summertime stratification. No clear seasonal cycles are evident in microbial DMSPd consumption rates or DMS yield but they vary within a relatively narrow range. Modeled phytoplankton DMS production rates are extremely large, negatively correlated to phytoplankton biomass indicators, and peak in the summer confirming that DMS concentrations and turnover processes are also affected by the physical dynamics of the surface mixed layer and by meteorological forcing such as total solar radiation, UV radiation, and wind speed. This research provides the first time-series of open-ocean organic sulfur cycling rates which will not only refine our understanding of the controlling mechanisms but will also serve as a basis for future oceanic and atmospheric

  7. Abundance of broad bacterial Taxa in the Sargasso Sea explained by environmental conditions but not water mass

    DEFF Research Database (Denmark)

    Sjöstedt, Johanna; Martiny, Jennifer Bellanca Hughes; Munk, Peter;

    2014-01-01

    of Synechococcus, Prochlorococcus, and picoalgae were determined by flow cytometry. Linear multiple-regression models determining the relative effects of eight environmental variables and of water mass explained 35 to 86% of the variation in abundance of the quantified taxa, even though only one to three variables......To explore the potential linkage between distribution of marine bacterioplankton groups, environmental conditions, and water mass, we investigated the factors determining the abundance of bacterial taxa across the hydrographically complex Subtropical Convergence Zone in the Sargasso Sea. Based...

  8. “There is Always The Other Side”:Deconstruction of English Identity and Masculinity-Intertextuality between Wide Sargasso Sea and Jane Eyre

    Institute of Scientific and Technical Information of China (English)

    WU Juan-juan

    2015-01-01

    Jean Rhys’Wide Sargasso Sea is the classic revisionary novella of Charlotte Bronte’s Jane Eyre. It rewrites the tragic story of Mr. Rochester’s voiceless and lunatic ex-wife, Berthe Mason. This paper turns to the intertextual relationship between the two texts and argues that the subversive rewriting of Wide Sargasso Sea destabilizes and deconstructs Mr. Rochester’s English iden⁃tity and masculinity, which are manifestly presented in the pre-text. It therefore renders the young Mr. Rochester problematic and insufficient, reveals“the other side”of the story and articulately tells the truth about who is really the mad one.

  9. Phytoplankton responses to atmospheric metal deposition in the coastal and open-ocean Sargasso Sea.

    Science.gov (United States)

    Mackey, Katherine R M; Buck, Kristen N; Casey, John R; Cid, Abigail; Lomas, Michael W; Sohrin, Yoshiki; Paytan, Adina

    2012-01-01

    This study investigated the impact of atmospheric metal deposition on natural phytoplankton communities at open-ocean and coastal sites in the Sargasso Sea during the spring bloom. Locally collected aerosols with different metal contents were added to natural phytoplankton assemblages from each site, and changes in nitrate, dissolved metal concentration, and phytoplankton abundance and carbon content were monitored. Addition of aerosol doubled the concentrations of cadmium (Cd), cobalt (Co), copper (Cu), iron (Fe), manganese (Mn), and nickel (Ni) in the incubation water. Over the 3-day experiments, greater drawdown of dissolved metals occurred in the open ocean water, whereas little metal drawdown occurred in the coastal water. Two populations of picoeukaryotic algae and Synechococcus grew in response to aerosol additions in both experiments. Particulate organic carbon increased and was most sensitive to changes in picoeukaryote abundance. Phytoplankton community composition differed depending on the chemistry of the aerosol added. Enrichment with aerosol that had higher metal content led to a 10-fold increase in Synechococcus abundance in the oceanic experiment but not in the coastal experiment. Enrichment of aerosol-derived Co, Mn, and Ni were particularly enhanced in the oceanic experiment, suggesting the Synechococcus population may have been fertilized by these aerosol metals. Cu-binding ligand concentrations were in excess of dissolved Cu in both experiments, and increased with aerosol additions. Bioavailable free hydrated Cu(2+) concentrations were below toxicity thresholds throughout both experiments. These experiments show (1) atmospheric deposition contributes biologically important metals to seawater, (2) these metals are consumed over time scales commensurate with cell growth, and (3) growth responses can differ between distinct Synechococcus or eukaryotic algal populations despite their relatively close geographic proximity and taxonomic similarity.

  10. Phytoplankton responses to atmospheric metal deposition in the coastal and open-ocean Sargasso Sea

    Directory of Open Access Journals (Sweden)

    Katherine Rose Marie Mackey

    2012-10-01

    Full Text Available This study investigated the impact of atmospheric metal deposition on natural phytoplankton communities at open-ocean and coastal sites in the Sargasso Sea during the spring bloom. Locally collected aerosols with different metal contents were added to natural phytoplankton assemblages from each site, and changes in nitrate, dissolved metal concentration, and phytoplankton abundance and carbon content were monitored. Addition of aerosol doubled the concentrations of cadmium, cobalt, copper, iron, manganese and nickel in the incubation water. Over the three-day experiments, greater drawdown of dissolved metals occurred in the open ocean water, whereas little metal drawdown occurred in the coastal water. Two populations of picoeukaryotic algae and Synechococcus grew in response to aerosol additions in both experiments. Particulate organic carbon (POC increased and was most sensitive to changes in picoeukaryote abundance. Phytoplankton community composition differed depending on the chemistry of the aerosol added. Enrichment with aerosol that had higher metal content led to a 10-fold increase in Synechococcus abundance in the oceanic experiment but not in the coastal experiment. Enrichment of aerosol-derived cobalt (Co, manganese, and nickel were particularly enhanced in the oceanic experiment, suggesting the Synechococcus population may have been fertilized by these aerosol metals. Copper (Cu-binding ligand concentrations were in excess of dissolved Cu in both experiments, and increased with aerosol additions. Bioavailable free hydrated Cu2+ concentrations were below toxicity thresholds throughout both experiments. These experiments show (1 atmospheric deposition contributes biologically important metals to seawater, (2 these metals are consumed over time scales commensurate with cell growth, and (3 growth responses can differ between distinct Synechococcus or eukaryotic algal populations despite relatively close geographic proximity and taxonomic

  11. Ocean circulation and biogeochemistry moderate interannual and decadal surface water pH changes in the Sargasso Sea

    Science.gov (United States)

    Nathalie F. Goodkin,; Bo-Shian Wang,; Chen-Feng You,; Konrad Hughen,; Prouty, Nancy G.; Bates, Nicholas; Scott Doney,

    2015-01-01

    The oceans absorb anthropogenic CO2 from the atmosphere, lowering surface ocean pH, a concern for calcifying marine organisms. The impact of ocean acidification is challenging to predict as each species appears to respond differently and because our knowledge of natural changes to ocean pH is limited in both time and space. Here we reconstruct 222 years of biennial seawater pH variability in the Sargasso Sea from a brain coral, Diploria labyrinthiformis. Using hydrographic data from the Bermuda Atlantic Time-series Study and the coral-derived pH record, we are able to differentiate pH changes due to surface temperature versus those from ocean circulation and biogeochemical changes. We find that ocean pH does not simply reflect atmospheric CO2 trends but rather that circulation/biogeochemical changes account for >90% of pH variability in the Sargasso Sea and more variability in the last century than would be predicted from anthropogenic uptake of CO2 alone.

  12. Species composition and diversity of fish larvae in the Subtropical Convergence Zone of the Sargasso Sea from morphology and DNA barcoding

    DEFF Research Database (Denmark)

    Ayala, Daniel Jiro; Munk, Peter; Riemann, Lasse

    2016-01-01

    Specific regions of otherwise oligotrophic oceans seem to attract fish spawning and sustain significant abundances of fish larvae. The Sargasso Sea in the North Atlantic subtropical gyre is known as the spawning area of the Atlantic eels, but numerous other fish species also spawn in the area. In...

  13. Physical and chemical data collected from bottle casts in the Sargasso Sea from CAPE HENLOPEN and other platforms from 21 January 1988 to 10 December 1988 (NODC Accession 0000407)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Physical and chemical data were collected using bottle casts in the Sargasso sea from CAPE HENLOPEN, CAPE HATTERAS, and WEATHERBIRD from 21 January 1988 to 10...

  14. Mechanisms for Variation of Cellular P Stoichiometry: Diverse Cellular Phosphorus Allocation Strategies Across Microbial Groups from the Sargasso Sea

    Science.gov (United States)

    Popendorf, K.; Duhamel, S.

    2016-02-01

    Phosphorus is the least abundant of the three major macronutrients that define the canonical Redfield ratio, but its place in the backbone of nucleic acids and as an energy trafficking molecule lays a lower bound of cellular phosphorus content that is essential for all life. In addition to forming DNA, RNA, and adenosine triphosphate (ATP), significant amounts of cellular phosphorus may also be allocated to the production of phospholipids and polyphosphate. These latter two biochemicals in particular may occur in significant but highly variable amounts across different microbial groups, and the variation in cellular allocation to these biochemicals may be a contributing factor in defining the elemental stoichiometry of microbes. We investigated this variation in cellular phosphorus allocation across the most abundant microbial groups in the P-depleted Sargasso Sea: Prochlorococcus, Synechococcus, and heterotrophic bacteria. By coupling radioisotope tracing of phosphate and ATP with cell sorting flow cytometry and subsequent biochemical extractions, we made novel measurements of the P allocation to DNA, phospholipids, and polyphosphate in individual microbial groups from environmental populations. These results provide new insights into the cellular mechanisms of variation in stoichiometry and different microbial strategies for adaptation to low-P environments.

  15. Dynamics of Superoxide Production and Decay in Natural Trichodesmium Colonies from the Sargasso Sea: Implications for Cell Signaling

    Science.gov (United States)

    Hansel, C. M.; Buchwald, C.; Diaz, J. M.; Dyhrman, S.; Van Mooy, B. A. S.

    2014-12-01

    Reactive oxygen species (ROS) are key players in the biogeochemistry of the ocean, where they serve a critical role in the cycling of carbon and metals. Research in the past decade has introduced phytoplankton and, most recently, heterotrophic bacteria as significant sources of ROS, including superoxide, within both photic and aphotic regions of the ocean. ROS are both beneficial and detrimental to life. For instance, superoxide is a vital inter- and intra-cellular signaling molecule, yet at high concentrations it induces lipid peroxidation and initiates programmed cell death (PCD). In fact, superoxide has been implicated in PCD in the nitrogen-fixing diazotroph Trichodesmium, presumably leading to the demise of blooms within oligotrophic marine systems. Here, we explore the rates of superoxide production and decay by natural Trichodesmium populations obtained from various surface waters in the Sargasso Sea. We investigate also the role of light and colony density and morphology (puff v. raft) on superoxide fluxes. We find that Trichodesmium colonies produce extracellular superoxide at extremely high rates in the dark that are on par with those of the toxic raphidophyte Chattonella. The rates of superoxide production, however, rapidly decline with increasing cell density pointing to a role for superoxide in cell signaling in these organisms. We also find extremely rapid extracellular superoxide degradation by Trichodesmium. Together, this likely reflects a need for these organisms to maintain ROS at levels that will support signaling but below the threshold level that triggers PCD or oxidative damage. We also show differences in the effect of light on superoxide fluxes as a function of Trichodesmium colony morphology, suggesting differences in either colony physiology or associated bacterial symbionts. These findings point to complex physiological, ecological, and physical influences on ROS dynamics in phytoplankton that require further exploration.

  16. The Oceanic Flux Program: A three decade time-series of particle flux in the deep Sargasso Sea

    Science.gov (United States)

    Weber, J. C.; Conte, M. H.

    2010-12-01

    The Oceanic Flux Program (OFP), 75 km SE of Bermuda, is the longest running time-series of its kind. Initiated in 1978, the OFP has produced an unsurpassed, nearly continuous record of temporal variability in deep ocean fluxes, with a >90% temporal coverage at 3200m depth. The OFP, in conjunction with the co-located Bermuda-Atlantic Time Series (BATS) and the Bermuda Testbed Mooring (BTM) time-series, has provided key observations enabling detailed assessment of how seasonal and non-seasonal variability in the deep ocean is linked with the overlying physical and biogeochemical environment. This talk will focus on the short-term flux variability that overlies the seasonal flux pattern in the Sargasso Sea, emphasizing episodic extreme flux events. Extreme flux events are responsible for much of the year-to-year variability in mean annual flux and are most often observed during early winter and late spring when surface stratification is weak or transient. In addition to biological phenomena (e.g. salp blooms), passage of productive meso-scale features such as eddies, which alter surface water mixing characteristics and surface export fluxes, may initiate some extreme flux events. Yet other productive eddies show a minimal influence on the deep flux, underscoring the importance of upper ocean ecosystem structure and midwater processes on the coupling between the surface ocean environment and deep fluxes. Using key organic and inorganic tracers, causative processes that influence deep flux generation and the strength of the coupling with the surface ocean environment can be identified.

  17. A dynamic model of oceanic sulfur (DMOS) applied to the Sargasso Sea: Simulating the dimethylsulfide (DMS) summer paradox

    Science.gov (United States)

    Vallina, S. M.; Simó, R.; Anderson, T. R.; Gabric, A.; Cropp, R.; Pacheco, J. M.

    2008-03-01

    A new one-dimensional model of DMSP/DMS dynamics (DMOS) is developed and applied to the Sargasso Sea in order to explain what drives the observed dimethylsulfide (DMS) summer paradox: a summer DMS concentration maximum concurrent with a minimum in the biomass of phytoplankton, the producers of the DMS precursor dimethylsulfoniopropionate (DMSP). Several mechanisms have been postulated to explain this mismatch: a succession in phytoplankton species composition towards higher relative abundances of DMSP producers in summer; inhibition of bacterial DMS consumption by ultraviolet radiation (UVR); and direct DMS production by phytoplankton due to UVR-induced oxidative stress. None of these hypothetical mechanisms, except for the first one, has been tested with a dynamic model. We have coupled a new sulfur cycle model that incorporates the latest knowledge on DMSP/DMS dynamics to a preexisting nitrogen/carbon-based ecological model that explicitly simulates the microbial-loop. This allows the role of bacteria in DMS production and consumption to be represented and quantified. The main improvements of DMOS with respect to previous DMSP/DMS models are the explicit inclusion of: solar-radiation inhibition of bacterial sulfur uptakes; DMS exudation by phytoplankton caused by solar-radiation-induced stress; and uptake of dissolved DMSP by phytoplankton. We have conducted a series of modeling experiments where some of the DMOS sulfur paths are turned "off" or "on," and the results on chlorophyll-a, bacteria, DMS, and DMSP (particulate and dissolved) concentrations have been compared with climatological data of these same variables. The simulated rate of sulfur cycling processes are also compared with the scarce data available from previous works. All processes seem to play a role in driving DMS seasonality. Among them, however, solar-radiation-induced DMS exudation by phytoplankton stands out as the process without which the model is unable to produce realistic DMS simulations

  18. Storm impact on sea surface temperature and chlorophyll a in the Gulf of Mexico and Sargasso Sea based on daily cloud-free satellite data reconstructions

    Science.gov (United States)

    Shropshire, Taylor; Li, Yizhen; He, Ruoying

    2016-12-01

    Upper ocean responses to tropical storms/hurricanes have been extensively studied using satellite observations. However, resolving concurrent sea surface temperature (SST) and chlorophyll a (chl a) responses along storm tracks remains a major challenge due to extensive cloud coverage in satellite images. Here we produce daily cloud-free SST and chl a reconstructions based on the Data INterpolating Empirical Orthogonal Function method over a 10 year period (2003-2012) for the Gulf of Mexico and Sargasso Sea regions. Daily reconstructions allow us to characterize and contrast previously obscured subweekly SST and chl a responses to storms in the two main storm-impacted regions of the Atlantic Ocean. Statistical analyses of daily SST and chl a responses revealed regional differences in the response time as well as the response sensitivity to maximum sustained wind speed and translation speed. This study demonstrates that SST and chl a responses clearly depend on regional ocean conditions and are not as universal as might have been previously suggested.

  19. Phosphorus cycling in the Sargasso Sea: Investigation using the oxygen isotopic composition of phosphate, enzyme-labeled fluorescence, and turnover times

    Science.gov (United States)

    McLaughlin, Karen; Sohm, Jill A.; Cutter, Gregory A.; Lomas, Michael W.; Paytan, Adina

    2013-04-01

    Dissolved inorganic phosphorus (DIP) concentrations in surface water of vast areas of the ocean are extremely low (oxygen isotopic signature of dissolved phosphate (δ18OPO4) to investigate biogeochemical cycling of P in the Sargasso Sea, Atlantic Ocean. Additional techniques for studying P dynamics including 33P-based DIP turnover time estimates and percent of cells expressing alkaline phosphatase (AP) activity as measured by enzyme-labeling fluorescence are also used. In surface waters, δ18OPO4 values were lower than equilibrium by 3-6‰, indicative of dissolved organic phosphorous (DOP) remineralization by extracellular enzymes. An isotope mass balance model using a variety of possible combinations of enzymatic pathways and substrates indicates that DOP remineralization in the euphotic zone can account for a large proportion on P utilized by phytoplankton (as much as 82%). Relatively short DIP turnover times (4-8 h) and high expression of AP (38-77% of the cells labeled) are consistent with extensive DOP utilization and low DIP availability in the euphotoc zone. In deep water where DOP utilization rates are lower, δ18OPO4 values approach isotopic equilibrium and DIP turnover times are longer. Our data suggests that in the euphotic zone of the Sargasso Sea, DOP may be appreciably remineralized and utilized by phytoplankton and bacteria to supplement cellular requirements. A substantial fraction of photosynthesis in this region is supported by DOP uptake.

  20. Physical, nutrient, chlorophyll a and plankton abundance data collected from CTD and bottle casts aboard the R/Vs OCEANUS and ENDEAVOR in the Western Sargasso Sea and Northeast U.S. Shelf from 2004 to 2005 (NODC Accession 0053611)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Physical, chemical and biologic parameters were measured in the Western Sargasso Sea and Northeast U.S. shelf aboard the R/V Endeavor from 13 May to 31 May, 2004 and...

  1. L’image du père et du jardin : Jane Eyre de Charlotte Brontë  et WideSargasso Sea de Jean Rhys Of Father Figures and Gardens: Charlotte Brontë’s Jane Eyre and Jean Rhys’s Wide Sargasso Sea

    Directory of Open Access Journals (Sweden)

    Anne-Marie Baranowski

    2009-10-01

    Full Text Available Though no father actually appears as a character either in Jane Eyre or in Wide Sargasso Sea, the father figure looms large in both novels, as a complex, protean and paradoxical entity, playing a crucial part in the fate of the protagonists. Jane Eyre and Antoinette Cosway are orphaned at an early age, Rochester’s father is depicted as remote and insensitive; the surrogate fathers —Antoinette’s stepfather, Jane’s uncles— mostly fail when they try to replace the missing one. Rochester himself is an ambiguous character who appears in both novels as a son, lover and husband on the one side, as a father figure on the other. In Wide Sargasso Sea he acquires through his marriage to the heiress Antoinette Cosway a legal authority which he eventually uses to destroy his wife; in Jane Eyre he first appears as the wealthier, more knowledgeable, stronger character before he discovers a female counterpart who does more than merely hold her ground.These different aspects of the father figure are closely linked to the motif of the garden which mirrors the inner development of the —mostly— female characters. It is not entirely similar to nature itself, though it is part of it; the latter means in both novels lethal dangers and elemental violence, whereas the garden is a sheltered place. In Wide Sargasso Sea, the debased garden of Coulibri simultaneously conveys a distorted, though by no means untrue reflection of the father figure and a sanctuary from the harshness of the outside world. It also means a place of peace and of simple joys for Jane Eyre, making up for the deprived life at the Lowood boarding school; but contrasting with Coulibri it does not preclude the contact with the outside world which she actually longs for. Hence the garden mirrors the crucial moments and experiences in the lives of both heroines, including love, married life and loss.

  2. Net community production of oxygen derived from in vitro and in situ 1-D modeling techniques in a cyclonic mesoscale eddy in the Sargasso Sea

    Directory of Open Access Journals (Sweden)

    B. Mouriño-Carballido

    2009-08-01

    Full Text Available It has been proposed that the disagreement traditionally reported between in vitro incubation and in situ estimates of oxygen net community production (NCP could be explained, at least partially, by undersampling episodic pulses of net autotrophy associated with mesoscale dynamics. In this study we compare in vitro incubation estimates of net community production with in situ estimates, derived from oxygen profiles and a 1-D model, within a cyclonic eddy investigated in the Sargasso Sea in summer 2004. The in vitro NCP rates measured at the center of the eddy showed a shift from net autotrophy (7±3 mmol O2 m−2 d−1 to net heterotrophy (−25±5 mmol O2 m−2 d−1 from late June to early August. The model-derived NCP rates also showed a temporal decline (19±6 to −3±7 and 11±8 mmol O2 m−2 d−1, but they were systematically higher than the in vitro estimates and reported net autotrophy or balance for the sampling period. In this comparison episodic pulses in photosynthesis or respiration driven by mesoscale eddies can not explain the discrepancy between the in vitro and in situ estimates of NCP. This points to methodological artefacts or temporal or submesoscale variability as the mechanisms responsible for the disagreement between the techniques, at least in this dataset.

  3. Toward the Autonomous Recording and Transmission of Seismic Data from the Oceans: Testing the Son-O-Mermaid Float in the Sargasso Sea

    Science.gov (United States)

    Simon, J. D.; Simons, F. J.; Vincent, H. T.; Nolet, G.

    2015-12-01

    We report on the deployment of two new Son-O-Mermaid floats into theSargasso Sea during a cruise aboard the R/V Atlantic Explorer, whichdeparted from Bermuda in May of 2015. Son-O-Mermaid is a freelyfloating and autonomous oceangoing system composed of a surface buoyconnected to a length of cable from which a three-hydrophone array issuspended. The main objective of the Son-O-Mermaid project is torecord signals suitable for global tomography in the deep ocean andprovide the seismic community with an abundance of novel raypaths frompreviously unsampled regions of the Earth. The Son-O-Mermaid float,with its ability to continually record, analyze, and transmit seismicdata from the oceans in near-real time has the potential torevolutionize the field of seismology. We analyze new data returnedfrom this deployment, a previous Son-O-Mermaid test, as well as theongoing MERMAID mission in the time, spectral, and wavelet domains. Afull description of the float and deployment report will be presented.A short-term goal of the project is determining realistic magnitude,distance, and pressure relationships for teleseismic earthquakes thatare recorded in the water column. Our analysis of this question isaided by synthetics created using SPECFEM2D and guided by the data,especially noise records recorded by Son-O-Mermaid and MERMAID fromoceans throughout the world. Synthetics provide an idealized waveformuseful for understanding the often very messy and noisy arrivalscommon in midcolumn acoustic recordings. Notably, synthetics allowthe confirmation or rejection of unlikely phases which are matched toearthquake databases after arrivals are detected by automatic pickingalgorithms. Additionally, marine-acoustic processing techniques willbe improved once the underwater acoustic field is better modeled usingrealistic signal-to-noise ratios and noise spectra returned fromSon-O-Mermaid and MERMAID missions. This analysis, particularly whenimplemented in the wavelet domain, is proving

  4. A “Rosetta Stone” for metazoan zooplankton: DNA barcode analysis of species diversity of the Sargasso Sea (Northwest Atlantic Ocean)

    Science.gov (United States)

    Bucklin, Ann; Ortman, Brian D.; Jennings, Robert M.; Nigro, Lisa M.; Sweetman, Christopher J.; Copley, Nancy J.; Sutton, Tracey; Wiebe, Peter H.

    2010-12-01

    Species diversity of the metazoan holozooplankton assemblage of the Sargasso Sea, Northwest Atlantic Ocean, was examined through coordinated morphological taxonomic identification of species and DNA sequencing of a ˜650 base-pair region of mitochondrial cytochrome oxidase I (mtCOI) as a DNA barcode (i.e., short sequence for species recognition and discrimination). Zooplankton collections were made from the surface to 5,000 meters during April, 2006 on the R/V R.H. Brown. Samples were examined by a ship-board team of morphological taxonomists; DNA barcoding was carried out in both ship-board and land-based DNA sequencing laboratories. DNA barcodes were determined for a total of 297 individuals of 175 holozooplankton species in four phyla, including: Cnidaria (Hydromedusae, 4 species; Siphonophora, 47); Arthropoda (Amphipoda, 10; Copepoda, 34; Decapoda, 9; Euphausiacea, 10; Mysidacea, 1; Ostracoda, 27); and Mollusca (Cephalopoda, 8; Heteropoda, 6; Pteropoda, 15); and Chaetognatha (4). Thirty species of fish (Teleostei) were also barcoded. For all seven zooplankton groups for which sufficient data were available, Kimura-2-Parameter genetic distances were significantly lower between individuals of the same species (mean=0.0114; S.D. 0.0117) than between individuals of different species within the same group (mean=0.3166; S.D. 0.0378). This difference, known as the barcode gap, ensures that mtCOI sequences are reliable characters for species identification for the oceanic holozooplankton assemblage. In addition, DNA barcodes allow recognition of new or undescribed species, reveal cryptic species within known taxa, and inform phylogeographic and population genetic studies of geographic variation. The growing database of "gold standard" DNA barcodes serves as a Rosetta Stone for marine zooplankton, providing the key for decoding species diversity by linking species names, morphology, and DNA sequence variation. In light of the pivotal position of zooplankton in ocean

  5. A Choice between Imprisonment and Freedom---The Motivation Analysis of Antoinette in Wide Sargasso Sea%囚禁或自由--《茫茫藻海》中安托瓦内特的动机解析

    Institute of Scientific and Technical Information of China (English)

    韦铭

    2014-01-01

    运用马斯洛的需求层次理论,阐释《茫茫藻海》中主人公安托瓦内特最后走到火烧阁楼这一步的深层次动机,指出了她由于各个层次的需求得不到满足,导致精神彻底崩溃,最后为了自我实现的诉求,以“飞蛾扑火”之姿在大火中得到自由。%This article analyzes the heroine of Wide Sargasso Sea Antoinette ’ s deep motivation to burn the attic from the per-spective of Maslow ’ s theory of “hierarchy of needs”, and points out that due to all levels of her needs are not satisfied , she suffers a mental collapse.Finally, for her pursuit of self -actualization, like a flying moth darts into the fire, she gets freedom in the fire.

  6. 克里奥尔人的悲剧命运——《藻海无边》的人类学阐释%Creoles' Tragic Fates——On Wide Sargasso Sea from Anthropological Perspective

    Institute of Scientific and Technical Information of China (English)

    许佳媛; 原一川; 许汉卿

    2011-01-01

    Antoinette's family in Wide Sargasso Sea are typical representatives of Creole.They are not white;they are not black,either.They are minority group in the then society both from physiological and psychological perspectives.They are marginalized in the then society.The whole family tragically dies.Their tragic fates are identical with the archetypes of sacrifice in anthropological study.The root cause of violence and death lies in the system of scapegoat.Their tragic deaths are due to that the operation and maintain of black and white mainstream social ideology lie in not only the propaganda and commotion,but also sacrifices.%简·里斯在小说《藻海无边》中主要塑造了安托瓦内特一家人作为克里奥尔人的典型代表。,他们被赋予了不同的话语能力,然而悲剧性的结局却几近相同。文章从人类学的角度对其悲剧命运进行了阐释,认为他们的悲剧命运不是偶然的,不论从先天的生理特征还是后天的心理特征来说,他们自始至终都游离于主流权利话语之外。殖民者白人和本地土著黑人为了维持他们群体的各自意义系统的稳定,一切不满足他们神话标准的个体都会被强制驱逐与边缘化,安托瓦内特一家人正是他们献祭的替罪羊。

  7. The Victim of the Conflict between New Society and Old Society---An Interpretation of Wide Sargasso Sea from the Perspective of Postcolonialism%新旧社会冲突的牺牲者:从后殖民解读《藻海无边》

    Institute of Scientific and Technical Information of China (English)

    夏梅花

    2014-01-01

    Wide Sargasso Sea narrates the story taking place in the West Indies. It depicts the transitional period to establish new order after the disintegration of slavery. My paper starts with the influence of social changes on each class and race to interpret the conflicts be-tween the black representing the new society and the white hero representing the old society. Antoinette without common roots has not on-ly been deserted by old society, but also not been accepted by new society. She has been in a state of suspension and eventually ended in death.%《藻海无边》是发生在加勒比地区奴隶制解体后,强烈要求建立新秩序的过渡时期。本文通过《藻海无边》中社会变革对各阶层各民族的影响入手来对代表新社会的黑人群体及代表旧社会的男主人公白人的解读,阐释了在新旧秩序交替时期,没有共同根基的安托瓦内特既被旧社会遗弃又不为新社会所接纳,从而处于一种悬置状态,最终自我灭亡。

  8. SEA domain autoproteolysis accelerated by conformational strain: energetic aspects.

    Science.gov (United States)

    Sandberg, Anders; Johansson, Denny G A; Macao, Bertil; Härd, Torleif

    2008-04-04

    A subclass of proteins with the SEA (sea urchin sperm protein, enterokinase, and agrin) domain fold exists as heterodimers generated by autoproteolytic cleavage within a characteristic G(-1)S+1VVV sequence. Autoproteolysis occurs by a nucleophilic attack of the serine hydroxyl on the vicinal glycine carbonyl followed by an N-->O acyl shift and hydrolysis of the resulting ester. The reaction has been suggested to be accelerated by the straining of the scissile peptide bond upon protein folding. In an accompanying article, we report the mechanism; in this article, we provide further key evidence and account for the energetics of coupled protein folding and autoproteolysis. Cleavage of the GPR116 domain and that of the MUC1 SEA domain occur with half-life (t((1/2))) values of 12 and 18 min, respectively, with lowering of the free energy of the activation barrier by approximately 10 kcal mol(-1) compared with uncatalyzed hydrolysis. The free energies of unfolding of the GPR116 and MUC1 SEA domains were measured to approximately 11 and approximately 15 kcal mol(-1), respectively, but approximately 7 kcal mol(-1) of conformational energy is partitioned as strain over the scissile peptide bond in the precursor to catalyze autoproteolysis by substrate destabilization. A straining energy of approximately 7 kcal mol(-1) was measured by using both a pre-equilibrium model to analyze stability and cleavage kinetics data obtained with the GPR116 SEA domain destabilized by core mutations or urea addition, as well as the difference in thermodynamic stabilities of the MUC1 SEA precursor mutant S1098A (with a G(-1)A+1VVV motif) and the wild-type protein. The results imply that cleavage by N-->O acyl shift alone would proceed with a t((1/2)) of approximately 2.3 years, which is too slow to be biochemically effective. A subsequent review of structural data on other self-cleaving proteins suggests that conformational strain of the scissile peptide bond may be a common mechanism of

  9. Genome sequences of six Pseudoalteromonas strains isolated from Arctic sea ice.

    Science.gov (United States)

    Bian, Fei; Xie, Bin-Bin; Qin, Qi-Long; Shu, Yan-Li; Zhang, Xi-Ying; Yu, Yong; Chen, Bo; Chen, Xiu-Lan; Zhou, Bai-Cheng; Zhang, Yu-Zhong

    2012-02-01

    Yu et al. (Polar Biol. 32:1539-1547, 2009) isolated 199 Pseudoalteromonas strains from Arctic sea ice. We sequenced the genomes of six of these strains, which are affiliated to different Pseudoalteromonas species based on 16S rRNA gene sequences, facilitating the study of physiology and adaptation of Arctic sea ice Pseudoalteromonas strains.

  10. 伯莎为何会“疯”?--论《藻海茫茫》女主角身份认同失败问题%Why is Bertha “Crazy” ? A Discussion on the Female Protagonist's Failure of Identification in Wilde Sargasso Sea

    Institute of Scientific and Technical Information of China (English)

    阳洋

    2014-01-01

    《藻海茫茫》因其特有的后殖民色彩而备受读者和批评家的关注。伯莎的“疯癫”及其纵火的行为,大多数评论者认为是遗传其母亲的缘故。此篇文章则认为这种“疯癫”是身份认同失败后身份迷失分裂的结果,伯莎分别在内部空间与外部空间中寻求认同却都以失败告终。其内部空间的认同在于与亲人的认同,外部空间的认同则为与黑人群体及白人群体的认同,内、外部空间身份认同的双重失败导致了伯莎偏激异常的心理及一系列行为,最终纵火而亡。%Wilde Sargasso Sea is known by readers and critics for its post - colonialism .Most people think that Bertha's mother is responsible for the craziness of Bertha and her act of arson .However ,this essay puts forward a new cause : her craziness and her act of arson is the loss caused by her failure to identify herself .In the novel ,Bertha has tried to search for identity from inner space and exterior space but failed .The identification in the inner space lies in that with her relatives and the identification in the exterior space is that with black people and white people .The double failure of identification in the two spaces results in her extreme and abnormal behavior and finally her arson and death .

  11. Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site.

    Science.gov (United States)

    Stingl, Ulrich; Tripp, Harry James; Giovannoni, Stephen J

    2007-08-01

    The introduction of high-throughput dilution-to-extinction culturing (HTC) of marine bacterioplankton using sterilized natural sea water as media yielded isolates of many abundant but previously uncultured marine bacterial clades. In early experiments, bacteria from the SAR11 cluster (class Alphaproteobacteria), which are presumed to be the most abundant prokaryotes on earth, were cultured. Although many additional attempts were made, no further strains of the SAR11 clade were obtained. Here, we describe improvements to the HTC technique, which led to the isolation of 17 new SAR11 strains from the Oregon coast and the Sargasso Sea, accounting for 28% and 31% of all isolates in these experiments. Phylogenetic analysis of the internal transcribed spacer (ITS) region showed that the isolates from the Oregon coast represent three different subclusters of SAR11, while isolates from the Sargasso Sea were more uniform and represented a single ITS cluster. A PCR assay proved the presence of proteorhodopsin (PR) in nearly all SAR11 isolates. Analysis of PR amino-acid sequences indicated that isolates from the Oregon coast were tuned to either green or blue light, while PRs from strains obtained from the Sargasso Sea were exclusively tuned to maximum absorbance in the blue. Interestingly, phylogenies based on PR and ITS did not correlate, suggesting lateral gene transfer. In addition to the new SAR11 strains, many novel strains belonging to clusters of previously uncultured or undescribed species of different bacterial phyla, including the first strain of the highly abundant alphaproteobacterial SAR116 clade, were isolated using the modified methods.

  12. Characterization of a Strain of Fukuyoa paulensis (Dinophyceae) from the Western Mediterranean Sea.

    Science.gov (United States)

    Laza-Martínez, Aitor; David, Helena; Riobó, Pilar; Miguel, Irati; Orive, Emma

    2016-07-01

    A single cell of the dinoflagellate genus Fukuyoa was isolated from the island of Formentera (Balearic Islands, west Mediterranean Sea), cultured, and characterized by morphological and molecular methods and toxin analyses. This is the first report of the Gambierdiscus lineage (genera Fukuyoa and Gambierdiscus) from the western Mediterranean Sea, which is cooler than its eastern basin. Molecular analyses revealed that the Mediterranean strain belongs to F. paulensis and that it bears LSU rDNA sequences identical to New Zealand, Australian, and Brazilian strains. It also shared an identical sequence of the more variable ITS-rDNA with the Brazilian strain. Toxin analyses showed the presence of maitotoxin, 54-deoxyCTX1B, and gambieric acid A. This is the first observation of the two latter compounds in a Fukuyoa strain. Therefore, both Gambierdiscus and Fukuyoa should be considered when as contributing to ciguatera fish poisoning. Different strains of Fukuyoa form a complex of morphologically cryptic lineages where F. paulensis stands as the most distantly related nominal species. The comparison of the ITS2 secondary structures revealed the absence of CBCs among strains. The study of the morphological and molecular traits depicted an unresolved taxonomic scenario impacted by the low strains sampling.

  13. Prophage-Encoded Staphylococcal Enterotoxin A: Regulation of Production in Staphylococcus aureus Strains Representing Different Sea Regions.

    Science.gov (United States)

    Zeaki, Nikoleta; Susilo, Yusak Budi; Pregiel, Anna; Rådström, Peter; Schelin, Jenny

    2015-12-09

    The present study investigates the nature of the link between the staphylococcal enterotoxin A (SEA) gene and the lifecycle of Siphoviridae bacteriophages, including the origin of strain variation regarding SEA production after prophage induction. Five strains representing three different genetic lines of the sea region were studied under optimal and prophage-induced growth conditions and the Siphoviridae lifecycle was followed through the phage replicative form copies and transcripts of the lysogenic repressor, cro. The role of SOS response on prophage induction was addressed through recA transcription in a recA-disruption mutant. Prophage induction was found to increase the abundance of the phage replicative form, the sea gene copies and transcripts and enhance SEA production. Sequence analysis of the sea regions revealed that observed strain variances were related to strain capacity for prophage induction, rather than sequence differences in the sea region. The impact of SOS response activation on the phage lifecycle was demonstrated by the absence of phage replicative form copies in the recA-disruption mutant after prophage induction. From this study it emerges that all aspects of SEA-producing strain, the Siphoviridae phage and the food environment must be considered when evaluating SEA-related hazards.

  14. Prophage-Encoded Staphylococcal Enterotoxin A: Regulation of Production in Staphylococcus aureus Strains Representing Different Sea Regions

    Directory of Open Access Journals (Sweden)

    Nikoleta Zeaki

    2015-12-01

    Full Text Available The present study investigates the nature of the link between the staphylococcal enterotoxin A (SEA gene and the lifecycle of Siphoviridae bacteriophages, including the origin of strain variation regarding SEA production after prophage induction. Five strains representing three different genetic lines of the sea region were studied under optimal and prophage-induced growth conditions and the Siphoviridae lifecycle was followed through the phage replicative form copies and transcripts of the lysogenic repressor, cro. The role of SOS response on prophage induction was addressed through recA transcription in a recA-disruption mutant. Prophage induction was found to increase the abundance of the phage replicative form, the sea gene copies and transcripts and enhance SEA production. Sequence analysis of the sea regions revealed that observed strain variances were related to strain capacity for prophage induction, rather than sequence differences in the sea region. The impact of SOS response activation on the phage lifecycle was demonstrated by the absence of phage replicative form copies in the recA-disruption mutant after prophage induction. From this study it emerges that all aspects of SEA-producing strain, the Siphoviridae phage and the food environment must be considered when evaluating SEA-related hazards.

  15. Laboratory-Cultured Strains of the Sea Anemone Exaiptasia Reveal Distinct Bacterial Communities

    KAUST Repository

    Herrera Sarrias, Marcela

    2017-05-02

    Exaiptasia is a laboratory sea anemone model system for stony corals. Two clonal strains are commonly used, referred to as H2 and CC7, that originate from two genetically distinct lineages and that differ in their Symbiodinium specificity. However, little is known about their other microbial associations. Here, we examined and compared the taxonomic composition of the bacterial assemblages of these two symbiotic Exaiptasia strains, both of which have been cultured in the laboratory long-term under identical conditions. We found distinct bacterial microbiota for each strain, indicating the presence of host-specific microbial consortia. Putative differences in the bacterial functional profiles (i.e., enrichment and depletion of various metabolic processes) based on taxonomic inference were also detected, further suggesting functional differences of the microbiomes associated with these lineages. Our study contributes to the current knowledge of the Exaiptasia holobiont by comparing the bacterial diversity of two commonly used strains as models for coral research.

  16. Antimicrobial Activity of Monoramnholipids Produced by Bacterial Strains Isolated from the Ross Sea (Antarctica

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    Pietro Tedesco

    2016-04-01

    Full Text Available Microorganisms living in extreme environments represent a huge reservoir of novel antimicrobial compounds and possibly of novel chemical families. Antarctica is one of the most extraordinary places on Earth and exhibits many distinctive features. Antarctic microorganisms are well known producers of valuable secondary metabolites. Specifically, several Antarctic strains have been reported to inhibit opportunistic human pathogens strains belonging to Burkholderia cepacia complex (Bcc. Herein, we applied a biodiscovery pipeline for the identification of anti-Bcc compounds. Antarctic sub-sea sediments were collected from the Ross Sea, and used to isolate 25 microorganisms, which were phylogenetically affiliated to three bacterial genera (Psychrobacter, Arthrobacter, and Pseudomonas via sequencing and analysis of 16S rRNA genes. They were then subjected to a primary cell-based screening to determine their bioactivity against Bcc strains. Positive isolates were used to produce crude extracts from microbial spent culture media, to perform the secondary screening. Strain Pseudomonas BNT1 was then selected for bioassay-guided purification employing SPE and HPLC. Finally, LC-MS and NMR structurally resolved the purified bioactive compounds. With this strategy, we achieved the isolation of three rhamnolipids, two of which were new, endowed with high (MIC < 1 μg/mL and unreported antimicrobial activity against Bcc strains.

  17. Antimicrobial Activity of Monoramnholipids Produced by Bacterial Strains Isolated from the Ross Sea (Antarctica) †

    Science.gov (United States)

    Tedesco, Pietro; Maida, Isabel; Palma Esposito, Fortunato; Tortorella, Emiliana; Subko, Karolina; Ezeofor, Chidinma Christiana; Zhang, Ying; Tabudravu, Jioji; Jaspars, Marcel; Fani, Renato; de Pascale, Donatella

    2016-01-01

    Microorganisms living in extreme environments represent a huge reservoir of novel antimicrobial compounds and possibly of novel chemical families. Antarctica is one of the most extraordinary places on Earth and exhibits many distinctive features. Antarctic microorganisms are well known producers of valuable secondary metabolites. Specifically, several Antarctic strains have been reported to inhibit opportunistic human pathogens strains belonging to Burkholderia cepacia complex (Bcc). Herein, we applied a biodiscovery pipeline for the identification of anti-Bcc compounds. Antarctic sub-sea sediments were collected from the Ross Sea, and used to isolate 25 microorganisms, which were phylogenetically affiliated to three bacterial genera (Psychrobacter, Arthrobacter, and Pseudomonas) via sequencing and analysis of 16S rRNA genes. They were then subjected to a primary cell-based screening to determine their bioactivity against Bcc strains. Positive isolates were used to produce crude extracts from microbial spent culture media, to perform the secondary screening. Strain Pseudomonas BNT1 was then selected for bioassay-guided purification employing SPE and HPLC. Finally, LC-MS and NMR structurally resolved the purified bioactive compounds. With this strategy, we achieved the isolation of three rhamnolipids, two of which were new, endowed with high (MIC < 1 μg/mL) and unreported antimicrobial activity against Bcc strains. PMID:27128927

  18. Infection of sea lamprey with an unusual strain of Aeromonas salmonicida

    Science.gov (United States)

    Diamanka, Arfang; Loch, Thomas P.; Cipriano, Rocco C.; Winters, Andrew D.; Faisal, Mohamed

    2014-01-01

    The invasion of the Laurentian Great Lakes by the fish-parasitic sea lamprey has led to catastrophic consequences, including the potential introduction of fish pathogens. Aeromonas salmonicida is a bacterial fish pathogen that causes devastating losses worldwide. Currently, there are five accepted subspecies of Aeromonas salmonicida: A. salmonicida subsp. salmonicida, masoucida, smithia, achromogenes, and pectinolytica. We discuss the discovery of an isolate of A. salmonicida that is pathogenic to rainbow trout (Oncorhynchus mykiss) and exhibits unique phenotypic and molecular characteristics. We examined 181 adult sea lamprey (Petromyzon marinus) from the Humber River (Lake Ontario watershed) and 162 adult sea lamprey from Duffins Creek (Lake Ontario watershed) during the spring seasons of 2005–11. Among those, 4/343 (1.2%) sea lamprey were culture positive for A. salmonicida, whereby biochemical and molecular studies identified three of the isolates as A. salmonicida subsp. salmonicida. The remaining isolate (As-SL1) recovered from Humber River sea lamprey was phenotypically more similar to A. salmonicida subsp. salmonicida than to the four other A. salmonicida subspecies. However, unlike A. salmonicida subsp. salmonicida, As-SL1 was sucrose positive, produced an acid-over-acid reaction on triple-sugar iron medium and did not amplify with A. salmonicida subsp. salmonicida specific primers. Phylogenetic analysis based on partial stretches of the 16S rRNA and DNA gyrase subunit B genes further confirmed that the As-SL1 isolate was not A. salmonicida subsp. masoucida, smithia, achromogenes, or pectinolytica. Based on our analyses, the As-SL1 isolate is either an unusual strain of A. salmonicida subsp. salmonicida or a novel A. salmonicida subspecies. The four A. salmonicida isolates that were recovered from sea lamprey were pathogenic to rainbow trout in experimental challenge studies. Our study also underscores the potential role of sea lamprey in the ecology of

  19. Diversity of Micromonospora strains from the deep Mediterranean Sea and their potential to produce bioactive compounds

    Directory of Open Access Journals (Sweden)

    Andrea Gärtner

    2016-06-01

    Full Text Available During studies on bacteria from the Eastern Mediterranean deep-sea, incubation under in situ conditions (salinity, temperature and pressure and heat treatment were used to selectively enrich representatives of Micromonospora. From sediments of the Ierapetra Basin (4400 m depth and the Herodotos Plain (2800 m depth, 21 isolates were identified as members of the genus Micromonospora. According to phylogenetic analysis of 16S rRNA gene sequences, the Micromonospora isolates could be assigned to 14 different phylotypes with an exclusion limit of ≥ 99.5% sequence similarity. They formed 7 phylogenetic clusters. Two of these clusters, which contain isolates obtained after enrichment under pressure incubation and phylogenetically are distinct from representative reference organism, could represent bacteria specifically adapted to the conditions in situ and to life in these deep-sea sediments. The majority of the Micromonospora isolates (90% contained at least one gene cluster for biosynthesis of secondary metabolites for non-ribosomal polypeptides and polyketides (polyketide synthases type I and type II. The determination of biological activities of culture extracts revealed that almost half of the strains produced substances inhibitory to the growth of Gram-positive bacteria. Chemical analyses of culture extracts demonstrated the presence of different metabolite profiles also in closely related strains. Therefore, deep-sea Micromonospora isolates are considered to have a large potential for the production of new antibiotic compounds.

  20. Isolation and Fatty Acid Profile of Selected Microalgae Strains from the Red Sea for Biofuel Production

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    Khalid M. Abu-Salah

    2013-05-01

    Full Text Available The isolation of lipid-rich autochthonous strains of microalgae is a crucial stage for the development of a microalgae-based biofuel production plant, as these microalgae already have the necessary adaptations to withstand competition, predation and the temperatures observed at each production site. This is particularly important in extreme climates such as in Saudi Arabia. Resorting to fluorescence activated cell sorting (FACS we screened for and isolated several microalgal strains from samples collected from the Red Sea. Relying on the fluorescence of BODIPY 505/515 (4,4-difluoro-1,3,5,7-tetramethyl-4-bora-3a,4a-diazasindacene and growth performance, four promising candidates were identified and the total lipid content and fatty acid profile was assessed for biofuels production. Selected isolates were classified as chlorophytes, belonging to three different genera: Picochlorum, Nannochloris and Desmochloris. The lipid contents were assessed microscopically by means of BODIPY 505/515-associated fluorescence to detect intracellular lipid bodies, which revealed several lipid drops in all selected strains. This result was confirmed by lipid gravimetric determination, which demonstrated that all strains under study presented inner cell lipid contents ranging from 20% to 25% of the biomass dry weight. Furthermore, the fatty acid methyl esters profile of all strains seems ideal for biodiesel production due to a low degree of polyunsaturated fatty acid methyl esters and high amount of palmitic and oleic acids.

  1. Measurement of antimicrobial activity of isolated bacteria from the Caspian sea and molecular identification of strains with antimicrobial effect

    Directory of Open Access Journals (Sweden)

    Sajad Harounabadi

    2015-12-01

    Full Text Available Introduction: Easy access and wide use of antimicrobial compounds led to the emergence of resistance among microorganisms. Therefore, screening and identifying antimicrobial compound with high effect of microorganisms in different environments is necessary and vital . Using microorganisms for biological aims change them to an important tool to control pathogens. Streptomyces griseus is one of them. The aim of this study is isolation of marine bacteria with antimicrobial effect against gram positive and negative bacteria. Finally, molecular identification of strains with antimicrobial activity. Materials and methods: In this study, 162 strains were isolated from the Caspian Sea .The strains were cultured on special medium and finally antimicrobial activity on references strains as measured. Among them four strains with remarkable antimicrobial activity were identified and selected. The strains were subjected to 16S rDNA PCR sequencing. The strains were submitted to NCBI as new Streptomyces griseus strains. Results: Among 162 strains, 4 strains had the most antimicrobial activity. The result showed, the strains were the most effective on Bacillus subtilis and Staphylococcus aureus (Gram positive bacteria and the least effect were observed on Escherichia coli and Pseudomonas aeruginosa (Gram negative bacteria. After sequencing, the strains were classified to sterptomyces griseus genu. Discussion and conclusion: In this study, 4 strains with antimicrobial activity were identified. According to the strength of these bacteria for controlling pathogenic bacteria resistant to antibiotic, we can have more pure microorganisms in optimized and controlled conditions for using in pharmaceutical industries and also for the treatment of dangerous pathogenic bacteria.

  2. Probiotic properties of Pediococcus strains isolated from jeotgals, salted and fermented Korean sea-food.

    Science.gov (United States)

    Lee, Kang Wook; Park, Ji Yeong; Sa, Hyun Deok; Jeong, Ji Hee; Jin, Dong Eun; Heo, Ho Jin; Kim, Jeong Hwan

    2014-08-01

    Three Pediococcus pentosaceus strains were isolated from jeotgals, salted and fermented Korean sea-foods, and their probiotic potentials were examined. After 2 h exposure to pH 3.0, P. pentosaceus F66 survived with the survival ratio of 32.6% followed by P. pentosaceus D56 (17.2%) and P. pentosaceus A24 (7.5%). P. pentosaceus F66 also survived better (26.6%) than P. pentosaceus A24 (13.7%) and P. pentosaceus D56 (5.8%) after 2 h exposure to 0.3% bile salts. Three strains grew slowly on MRS broth with 15% NaCl (w/v), reaching the OD600 values of 0.4-0.8 in 36 h. They adhered to Caco-2 cells (10.9-13.9 CFU/cell) with similar degree of adherence of a positive control, Lactobacillus rhamnosus GG (12.8 ± 0.5 CFU/cell). Three strains possess some desirable enzyme activities such as β-galactosidase, α-glucosidase, β-glucosidase, and N-acetyl-β-glucosidase. From these results, P. pentosaceus F66 seems qualified as a probiotic and can be utilized for fermented foods including jeotgals.

  3. Champacyclin, a New Cyclic Octapeptide from Streptomyces Strain C42 Isolated from the Baltic Sea

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    Alexander Pesic

    2013-12-01

    Full Text Available New isolates of Streptomyces champavatii were isolated from marine sediments of the Gotland Deep (Baltic Sea, from the Urania Basin (Eastern Mediterranean, and from the Kiel Bight (Baltic Sea. The isolates produced several oligopeptidic secondary metabolites, including the new octapeptide champacyclin (1a present in all three strains. Herein, we report on the isolation, structure elucidation and determination of the absolute stereochemistry of this isoleucine/leucine (Ile/Leu = Xle rich cyclic octapeptide champacyclin (1a. As 2D nuclear magnetic resonance (NMR spectroscopy could not fully resolve the structure of (1a, additional information on sequence and configuration of stereocenters were obtained by a combination of multi stage mass spectrometry (MSn studies, amino acid analysis, partial hydrolysis and subsequent enantiomer analytics with gas chromatography positive chmical ionization/electron impact mass spectrometry (GC-PCI/EI-MS supported by comparison to reference dipeptides. Proof of the head-to-tail cyclization of (1a was accomplished by solid phase peptide synthesis (SPPS compared to an alternatively side chain cyclized derivative (2. Champacyclin (1a is likely synthesized by a non-ribosomal peptide synthetase (NRPS, because of its high content of (d-amino acids. The compound (1a showed antimicrobial activity against the phytopathogen Erwinia amylovora causing the fire blight disease of certain plants.

  4. Structure and ecological roles of a novel exopolysaccharide from the arctic sea ice bacterium Pseudoalteromonas sp. Strain SM20310.

    Science.gov (United States)

    Liu, Sheng-Bo; Chen, Xiu-Lan; He, Hai-Lun; Zhang, Xi-Ying; Xie, Bin-Bin; Yu, Yong; Chen, Bo; Zhou, Bai-Cheng; Zhang, Yu-Zhong

    2013-01-01

    The structure and ecological roles of the exopolysaccharides (EPSs) from sea ice microorganisms are poorly studied. Here we show that strain SM20310, with an EPS production of 567 mg liter(-1), was screened from 110 Arctic sea ice isolates and identified as a Pseudoalteromonas strain. The EPS secreted by SM20310 was purified, and its structural characteristics were studied. The predominant repeating unit of this EPS is a highly complicated α-mannan with a molecular mass greater than 2 × 10(6) Da. The backbone of the EPS consists of 2-α-, 6-α-mannosyl residues, in which a considerable part of the 6-α-mannosyl residues are branched at the 2 position with either single t-mannosyl residues or two mannosyl residues. The structure of the described EPS is different from the structures of EPSs secreted by other marine bacteria. Analysis of the ecological roles of the identified EPS showed that the EPS could significantly enhance the high-salinity tolerance of SM20310 and improve the survival of SM20310 after freeze-thaw cycles. These results suggest that the EPS secreted by strain SM20310 enables the strain to adapt to the sea ice environment, which is characterized by low temperature, high salinity, and repeated freeze-thaw cycles. In addition to its functions in strain SM20310, this EPS also significantly improved the tolerance of Escherichia coli to freeze-thaw cycles, suggesting that it may have a universal impact on microorganism cryoprotection.

  5. Isolation and characterization of lactic acid bacteria strains with ornithine producing capacity from natural sea salt.

    Science.gov (United States)

    Yu, Jin-Ju; Oh, Suk-Heung

    2010-08-01

    Two lactic acid bacteria (LAB) having ornithine-producing capacity were isolated from Korean natural sea salt. They were Gram-positive, short rod-type bacteria, and able to grow anaerobically with CO(2) production. The isolates grew well on MRS broth at 30-37 degrees C and a pH of 6.5-8.0. The optimum temperature and pH for growth are 37 degrees C and pH 7.0. The isolates fermented D-ribose, D-galactose, D-lactose, D-maltose, Dcellobiose, D-tagatose, D-trehalose, sucrose, D-melezitose, gentiobiose, D-glucose but not D-melibiose, inositol, and L-sorbose. The 16S rDNA sequences of the two isolates showed 99.5% and 99.6% homology with the Weissella koreensis S5623 16S rDNA (Access no. AY035891). They were accordingly identified and named as Weissella koreensis MS1-3 and Weissella koreensis MS1-14, and produced intracellular ornithine at levels of 72 mg/100 g cell F.W. and 105 mg/100 g cell F.W. and extracellular ornithine at levels of 4.5 mg/100 ml and 4.6 mg/100 ml medium, respectively, by culturing in MRS broth supplemented with 1% arginine. High cell growth was maintained in MRS broth with a NaCl concentration of 0-6%. These results show for the first time that Korean natural sea salts contain lactic acid bacteria Weissella koreensis strains having ornithine producing capacity.

  6. Genetic and ecophysiological traits of Synechococcus strains isolated from coastal and open ocean waters of the Arabian Sea.

    Science.gov (United States)

    Bemal, Suchandan; Anil, Arga Chandrashekar

    2016-11-01

    The picocyanobacterium Synechococcus is a prominent primary producer in the marine environment. The marine Synechococcus strains are clustered into different clades representing ecologically distinct genotypes. In this study, we compared phylogeny, photophysiology and cell cycles of four novel phycoerythrin-containing Synechococcus strains (clade II of subcluster 5.1) isolated from different depths of the water column (surface and subsurface waters) in coastal and offshore regions of the eastern Arabian Sea. The surface water strains possessed a lesser number of thylakoid layers and had a higher zeaxanthin to chlorophyll a ratio than subsurface strains indicating possible influence of light intensity available at their niche. The DNA distribution pattern of the four strains was bimodal in optimal cellular physiology conditions with cell division restricted to the light period and synchronized with the light-dark cycle. The presence of phycourobilin or phycoerythrobilin and the ratio between these two chromophores in all four strains varied according to available spectral wavelength in situ This study indicates that the timing of cell division is conserved within these genotypically identical Synechococcus strains, despite their having different chromophore ratios. We conclude that the timing of cell division of the Synechococcus strains has a genetic basis rather than being determined by phenotypic characters, such as chromophore content and ratio.

  7. Antibiotic and heavy metal resistance in Shewanella putrefaciens strains isolated from shellfishes collected from West Sea, Korea.

    Science.gov (United States)

    Kang, Chang-Ho; So, Jae-Seong

    2016-11-15

    The aim of the present study was to determine the antibiotic resistance patterns and distribution of heavy-metal resistance in Shewanella putrefaciens strains isolated from shellfishes collected from West Sea; and to determine the relationship, if any, between antibiotic and heavy-metal resistance in these strains. Among the 15 strains isolated, two strains, SY1 and SY2, showed heavy-metal resistance in addition to high resistance to seven antibiotics: cephalothin, gentamicin, erythromycin, vancomycin, ampicillin, rifampicin, and streptomycin. We conclude that heavy-metal contamination imposes long-term, widespread, and recalcitrant selection pressure, which potentially contributes to the maintenance and spread of antibiotic resistance factors in bacteria. Moreover, this fact holds both environmental and clinical importance. Copyright © 2016. Published by Elsevier Ltd.

  8. Levantilides A and B, 20-Membered Macrolides from a Micromonospora Strain Isolated from the Mediterranean Deep Sea Sediment

    Directory of Open Access Journals (Sweden)

    Jutta Wiese

    2011-01-01

    Full Text Available Two new 20-membered macrolides, levantilide A and B, were isolated from the Micromonospora strain M71-A77. Strain M71-A77 was recovered from an Eastern Mediterranean deep-sea sediment sample and revealed to produce the levantilides under in situ salinity of 38.6‰. The chemical structures of the levantilides were elucidated on the basis of different one- and two- dimensional NMR experiments. Levantilide A exhibits a moderate antiproliferative activity against several tumor cell lines.

  9. In vitro antibacterial activity of venom protein isolated from sea snake Enhydrina schistosa against drugresistant human pathogenic bacterial strains

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    Palani Damotharan

    2015-06-01

    Full Text Available Objective: To evaluate the antibacterial activity of sea snake (Enhydrina schistosa venom protein against drug-resistant human pathogenic bacterial strains. Methods: The venom was collected by milking process from the live specimens of sea snake are using capillary tubes or glass plates. Venom was purified by ion exchange chromatography and it was tested for in-vitro antibacterial activity against 10 drug-resistant human pathogenic bacterial strains using the standard disc diffusion method. Results: The notable antibacterial activity was observed at 150 µg/mL concentration of purified venom and gave its minimum inhibitory concentrations values exhibited between 200-100 µg/mL against all the tested bacterial strains. The maximum zone of inhibition was observed at 16.4 mm against Salmonella boydii and the minimum activity was observed at 7.5 mm against Pseudomonas aeruginosa. After the sodium-dodecyl-sulfate-polyacrylamide gel electrophoresis there were a clear single band was detected in the gel that corresponding to purified venom protein molecular weight of 44 kDa. Conclusions: These results suggested that the sea snake venom might be a feasible source for searching potential antibiotics agents against human pathogenic diseases.

  10. Septicaemia and meningitis caused by infection of New Zealand sea lion pups with a hypermucoviscous strain of Klebsiella pneumoniae.

    Science.gov (United States)

    Roe, W D; Rogers, L; Pinpimai, K; Dittmer, K; Marshall, J; Chilvers, B L

    2015-04-17

    This study describes a syndrome of neonatal septicemia and meningitis in New Zealand sea lions, caused by a strain of Klebsiella pneumoniae that is phenotypically similar to strains causing environmentally-acquired septicemia and neuro-invasive disease in humans. Between late 2006 and early 2010, 123 pups from the Enderby Island breeding colony died of K. pneumoniae infection, with lesions including fibrinous to fibrinosuppurative meningitis, subdural hemorrhage, septic arthritis, herniation and hemorrhage of the cerebellar vermis, lymphadenitis and cellulitis. This infection was responsible for 58% of observed pup mortality over this time period, with most deaths occurring in the latter part of the breeding season (mid February onwards). The results of this study suggest that the pattern of this disease has changed since it was first described in 2002, when most deaths occurred early in the season (early to mid-January), and that it is an important and consistent cause of pup mortality in this population. In addition, a similar disease syndrome and bacterial strain was diagnosed in a single pup in a fragile recolonizing New Zealand sea lion population on mainland New Zealand, and the potential effect on this population is unknown but could have a negative impact on recolonisation at this site.

  11. Draft Genome Sequence of Pseudoalteromonas sp. Strain XI10 Isolated from the Brine-Seawater Interface of Erba Deep in the Red Sea

    KAUST Repository

    Zhang, Guishan

    2016-03-10

    Pseudoalteromonas sp. strain XI10 was isolated from the brine-seawater interface of Erba Deep in the Red Sea, Saudi Arabia. Here, we present the draft genome sequence of strain XI10, a gammaproteobacterium that synthesizes polysaccharides for biofilm formation when grown in liquid culture.

  12. Molecular typing of Escherichia coli strains associated with threatened sea ducks and near-shore marine habitats of southwest Alaska

    Science.gov (United States)

    Schamber, Jason L.

    2011-01-01

    In Alaska, sea ducks winter in coastal habitats at remote, non-industrialized areas, as well as in proximity to human communities and industrial activity. We evaluated prevalence and characteristics of Escherichia coli strains in faecal samples of Steller's eiders (Polysticta stelleri; n = 122) and harlequin ducks (Histrionicus histrionicus; n = 21) at an industrialized site and Steller's eiders (n = 48) at a reference site, and compared these strains with those isolated from water samples from near-shore habitats of ducks. The overall prevalence of E. coli was 16% and 67% in Steller's eiders and harlequin ducks, respectively, at the industrialized study site, and 2% in Steller's eiders at the reference site. Based on O and H antigen subtyping and genetic characterization by enterobacterial repetitive intergenic consensus polymerase chain reaction and pulsed-field gel electrophoresis, we found evidence of avian pathogenic E. coli (APEC) strains associated with both species and detected E. coli strains carrying virulence genes associated with mammals in harlequin ducks. Steller's eiders that carried APEC had lower serum total protein and albumin concentrations, providing further evidence of pathogenicity. The genetic profile of two E. coli strains from water matched an isolate from a Steller's eider providing evidence of transmission between near-shore habitats and birds.

  13. Colwellia psychrerythraea strains from distant deep sea basins show adaptation to local conditions

    Directory of Open Access Journals (Sweden)

    Stephen M Techtmann

    2016-05-01

    Full Text Available Many studies have shown that microbes, which share nearly identical 16S rRNA genes, can have highly divergent genomes. Microbes from distinct parts of the ocean also exhibit biogeographic patterning. Here we seek to better understand how certain microbes from the same species have adapted for growth under local conditions. The phenotypic and genomic heterogeneity of three strains of Colwellia psychrerythraea was investigated in order to understand adaptions to local environments. Colwellia are psychrophilic heterotrophic marine bacteria ubiquitous in cold marine ecosystems. We have recently isolated two Colwellia strains: ND2E from the Eastern Mediterranean and GAB14E from the Great Australian Bight. The 16S rRNA sequence of these two strains were greater than 98.2% identical to the well-characterized C. psychrerythraea 34H, which was isolated from arctic sediments. Salt tolerance, and carbon source utilization profiles for these strains were determined using Biolog Phenotype Microarrays’. These strains exhibited distinct salt tolerance, which was not associated with the salinity of sites of isolation. The carbon source utilization profiles were distinct with less than half of the tested carbon sources being metabolized by all three strains. Whole genome sequencing revealed that the genomes of these three strains were quite diverse with some genomes having up to 1600 strain-specific genes. Many genes involved in degrading strain-specific carbon sources were identified. There appears to be a link between carbon source utilization and location of isolation with distinctions observed between the Colwellia isolate recovered from sediment compared to water column isolates.

  14. Heading south or north: novel insights on European silver eel Anguilla anguilla migration in the North Sea

    NARCIS (Netherlands)

    Huisman, Jeroen; Verhelst, Pieterjan; Verhelst, Pieterjan; Deneudt, K.; Goethals, Peter; Moens, Tom; Nagelkerke, Leopold A.J.; Nolting, Carsten; Reubens, Jan; Schollema, Peter Paul; Winter, Hendrik V.; Mouton, Ans

    2016-01-01

    The European eel Anguilla anguilla L. is a critically endangered fish species that migrates from coastal and freshwater habitats to the Sargasso Sea to spawn. However, the exact migration routes and destination of European eel are still unknown. We are the first to observe southward migrating sil

  15. Oceanic fronts in the Sargasso Sea control the early life and drift of Atlantic eels

    DEFF Research Database (Denmark)

    Munk, Peter; Hansen, Michael Møller; Maas, Gregory E.;

    2010-01-01

    and steering their drift. The majority of the more westerly distributed American eel larvae are likely to follow a westerly/northerly drift route entrained in the Antilles/Florida Currents. European eel larvae are generally believed to initially follow the same route, but their more easterly distribution close...

  16. Differential timing of gene expression regulation between leptocephali of North Atlantic eels in the Sargasso Sea

    DEFF Research Database (Denmark)

    Bernatchez, Louis; Saint-Cyr, Jérôme; Maes, Gregory E.;

    2011-01-01

    The unique life-history characteristics of North Atlantic catadromous eels have long intrigued evolutionary biologists, especially with respect to mechanisms that could explain their persistence as two ecologically very similar but reproductively and geographically distinct species. Differential ...

  17. Oceanic Environmental Background Observations in the Sargasso Sea during September 1979.

    Science.gov (United States)

    1980-03-01

    current speed by counting the number of revolutions of a Savonius rotor over a chosen sampling time interval. Current direction is determined each...adColicn, instantaneous values of temperature, conductivity and pressure. The VACM measures current sp, eec using a Savonius rotor) and direction (using a

  18. Functional redundancy in phenol and toluene degradation in Pseudomonas stutzeri strains isolated from the Baltic Sea.

    Science.gov (United States)

    Heinaru, Eeva; Naanuri, Eve; Grünbach, Maarja; Jõesaar, Merike; Heinaru, Ain

    2016-09-01

    In the present study we describe functional redundancy of bacterial multicomponent monooxygenases (toluene monooxygenase (TMO) and toluene/xylene monooxygenase (XylAM) of TOL pathway) and cooperative genetic regulation at the expression of the respective catabolic operons by touR and xylR encoded regulatory circuits in five phenol- and toluene-degrading Pseudomonas stutzeri strains. In these strains both toluene degradation pathways (TMO and Xyl) are active and induced by toluene and phenol. The whole genome sequence of the representative strain 2A20 revealed the presence of complete TMO- and Xyl-upper pathway operons together with two sets of lower catechol meta pathway operons, as well as phenol-degrading operon in a single 292,430bp contig. The much lower GC content and analysis of the predicted ORFs refer to the plasmid origin of the approximately 130kb region of this contig, containing the xyl, phe and tou genes. The deduced amino acid sequences of the TMO, XylA and the large subunit of phenol monooxygenase (LmPH) show 98-100% identity with the respective gene products of the strain Pseudomonas sp. OX1. In both strains 2A20 and OX1 the meta-cleavage pathways for catechol degradation are coded by two redundant operons (phe and xyl). We show that in the strain 2A20 TouR and XylR are activated by different effector molecules, phenol and toluene, respectively, and they both control transcription of the xyl upper, tou (TMO) and phe catabolic operons. Although the growth parameters of redundant strains did not show advantage at toluene biodegradation, the functional redundancy could provide better flexibility to the bacteria in environmental conditions. Copyright © 2016 Elsevier B.V. All rights reserved.

  19. Strain localisation and population changes during fault system growth within the Inner Moray Firth, Northern North Sea

    Science.gov (United States)

    Walsh, J. J.; Childs, C.; Imber, J.; Manzocchi, T.; Watterson, J.; Nell, P. A. R.

    2003-02-01

    The evolution of fault populations is established for an area within the Late Jurassic Inner Moray Firth sub-basin of the North Sea. Sedimentation rates outstripped fault displacement rates resulting in the blanketing of fault scarps and the preservation of fault displacement histories. Displacement backstripping is used to establish the growth history of the fault system. Fault system evolution is characterised by early generation of the main fault pattern and progressive localisation of strain onto larger faults. This localisation is accompanied by the death of smaller faults and an associated change in the active fault population from power-law to scale-bound. Fault length populations evolve from a power-law frequency distribution containing all faults, to a power-law distribution with a marked non-power-law tail containing the largest faults. This change in population character is synchronous with the development of a fully-connected fault system extending across the mapped area and the accommodation of displacements almost exclusively on the largest faults. Strain localisation onto fewer and better connected faults represents the most efficient means of accommodating fault-related deformation and is considered to be a fundamental characteristic of the spatio-temporal evolution of fault systems. Progressive strain localisation requires complementary changes in the characteristics of associated earthquake populations.

  20. Limited genetic diversity among Sarcocystis neurona strains infecting southern sea otters precludes distinction between marine and terrestrial isolates.

    Science.gov (United States)

    Wendte, J M; Miller, M A; Nandra, A K; Peat, S M; Crosbie, P R; Conrad, P A; Grigg, M E

    2010-04-19

    Sarcocystis neurona is an apicomplexan parasite identified as a cause of fatal neurological disease in the threatened southern sea otter (Enhydra lutris nereis). In an effort to characterize virulent S. neurona strains circulating in the marine ecosystem, this study developed a range of markers relevant for molecular genotyping. Highly conserved sequences within the 18S ribosomal gene array, the plastid-encoded RNA polymerase (RPOb) and the cytochrome c oxidase subunit 1 mitochondrial gene (CO1) were assessed for their ability to distinguish isolates at the genus and species level. For within-species comparisons, five surface antigens (SnSAG1-SnSAG5) and one high resolution microsatellite marker (Sn9) were developed as genotyping markers to evaluate intra-strain diversity. Molecular analysis at multiple loci revealed insufficient genetic diversity to distinguish terrestrial isolates from strains infecting marine mammals. Furthermore, SnSAG specific primers applied against DNA from the closely related species, Sarcocystis falcatula, lead to the discovery of highly similar orthologs to SnSAG2, 3, and 4, calling into question the specificity of diagnostic tests based on these antigens. The results of this study suggest a population genetic structure for S. neurona similar to that reported for the related parasite, Toxoplasma gondii, dominated by a limited number of successful genotypes. Published by Elsevier B.V.

  1. Fossil DNA Stratigraphy revealed Multiple Sources of Alkenones in the Holocene Black Sea at the Strain Level: Implications for UK37 Paleothermometry

    Science.gov (United States)

    Coolen, M. J.; Saenz, J. P.; Trowbridge, N.; Eglinton, T.

    2007-12-01

    The fossil distribution of long-chain alkenones is now a widely accepted tool to reconstruct past sea surface temperatures (SST) (i.e. UK37-index). In most studies, the UK37 index is calibrated for the main source of alkenones, the coccolithophorid haptophyte Emiliania huxleyi. Besides temperature, additional factors such as salinity, growth conditions, or different or multiple biological sources seem to influence the level of unsaturation of alkenones and the reliability of the UK37-inferred SST. The Black Sea is an interesting setting to study such factors since unreliable SST were reconstructed from the Holocene sapropel with high concentrations of an unusual "Black Sea" alkenone (C36:2 ethyl ketone) whereas calcium-bearing microfossils (coccoliths) of haptophytes are lacking. To identify Holocene sources for alkenones in the Black Sea at the unprecedented strain-level and to refine paleoenvironmental conditions, we searched for multiple fossil genetic signatures of haptophytes. This revealed that the slow increase in salinity as a result of post-glacial introduction of Mediterranean waters in the paleo lacustrine Black Sea, caused a succession between alkenone-biosynthesizing haptophytes from Isochrysis spp. (which do not produce coccoliths), to a mixture of Isochrysis and E huxleyi strains, then only E. huxleyi strains, and when the salinity reached a threshold of 18 per mille at 3000 years BP, the fossilized calcium-bearing E. huxleyi strain was introduced. At least 11 E. huxleyi strains were identified and the first non-fossilizing strains already colonized the Black Sea 4000 years before the fossilized calcium-bearing strain appeared. Most E. huxleyi strains were likely sources of C36:2 eK but the presence of one fossil "phylotype" coincided with the highest levels of this unusual alkenone ( more than 80 percent of the total alkenone content) and unreliable past SST (varying between 5 and 30 degrees C; 7500-5500 years BP). C36:2 eK was not biosynthesized by

  2. ANTILISTERIAL ACTYVITY OF LACTIC ACID BACTERIA ISOLATED FROM GILTHEAD BREAMS AND SEA BASSES FILLETS PACKAGED MAP AGAINST PRIMITIVE STRAINS OF LISTERIA MONOCYTOGENES

    OpenAIRE

    M. Barile; A. Mormile; R Mercogliano; N. Murru

    2011-01-01

    Listeria monocytogenes is the causative agent of listeriosis typically caused by ready-to-eat processed food that have a refrigerated shelf-life, but lightly preserved fish products also belong to a high-risk category. Aim of the work was to evaluate antimicrobial activity linked bacteriocin-producing of LAB isolated from gilthead breams and sea basses fillets packaged in modified atmospheres. Fifty-five LAB strains were screened against 21 strains of Listeria monocytogenes, 1 Listeria innocu...

  3. Differences in cardiovascular risk profile between electrocardiographic hypertrophy versus strain in asymptomatic patients with aortic stenosis (from SEAS data)

    DEFF Research Database (Denmark)

    Greve, Anders M; Gerdts, Eva; Boman, Kurt

    2011-01-01

    Electrocardiograms are routinely obtained in clinical follow-up of patients with asymptomatic aortic stenosis (AS). The association with aortic valve, left ventricular (LV) response to long-term pressure load, and clinical covariates is unclear and the clinical value is thus uncertain. Data from...... clinical examination, electrocardiogram, and echocardiogram in 1,563 patients in the Simvastatin and Ezetimibe in Aortic Stenosis (SEAS) study were used. Electrocardiograms were Minnesota coded for arrhythmias and atrioventricular and intraventricular blocks; LV hypertrophy was assessed by Sokolow......-Lyon voltage and Cornell voltage-duration criteria; and strain by T-wave inversion and ST-segment depression. Degree of AS severity was evaluated by echocardiography as peak aortic jet velocity and LV mass was indexed by body surface area. After adjustment for age, gender, LV mass index, heart rate, systolic...

  4. Sea level differences across the Gulf Stream and Kuroshio extension

    Science.gov (United States)

    Zlotnicki, Victor

    1991-01-01

    The sea level differences between the Sargasso Sea and the slope waters across the Gulf Stream region, averaged between 73 and 61 deg W, and the comparable areas across the Kuroshio extension region, averaged between 143 and 156 deg E, were estimated using the Geosat altimeter data obtained between November 1986 and December 1988. The sea-level differences between the two regions showed a strong correlation between the northwest Atlantic and Pacific, dominated by annual cycles that peak in late-September to mid-October, with about 9 cm (the Gulf Stream region) and about 6.9 cm (Kuroshio region) amplitudes.

  5. Novel Cold-adaptive Penicillium Strain FS010 Secreting Thermo-labile Xylanase Isolated from Yellow Sea

    Institute of Scientific and Technical Information of China (English)

    Yun-Hua HOU; Tian-Hong WANG; Hao LONG; Hui-Yuan ZHU

    2006-01-01

    A novel cold-adaptive xylanolytic Penicillium strain FS010 was isolated from Yellow Sea sediments. The marine fungus grew well from 4 to 20 ℃; a lower (0 ℃) or higher (37 ℃) temperature limits its growth. The strain was identified as Penicillium chrysogenum. Compared with mesophilic P. chrysogenum,the cold-adaptive fungus secreted the cold-active xylanase (XYL) showing high hydrolytic activities at low temperature (2-15 ℃) and high sensitivity to high temperature (>50 ℃). The XYL gene was isolated from the cold-adaptive P. chrysogenum FS010 and designated as xyl. The deduced amino acid sequence of the protein encoded by xyl showed high homology with the sequence of glycoside hydrolase family 10. The gene was subcloned into an expression vector pGEX-4T-1 and the encoded protein was overexpressed as a fusion protein with glutathione-S-transferase in Escherichia coli BL21. The expression product was purified and subjected to enzymatic characterization. The optimal temperature and pH for recombinantXYL was 25 ℃ and 5.5, respectively. Recombinant XYL showed nearly 80% of its maximal activity at 4 ℃ and was active in the pH range 3.0-9.5.

  6. Potential biodegradation of crude petroleum oil by newly isolated halotolerant microbial strains from polluted Red Sea area.

    Science.gov (United States)

    Shetaia, Yousseria M H; El Khalik, Wafaa A A; Mohamed, Tarek M; Farahat, Laila A; ElMekawy, Ahmed

    2016-10-15

    Two microbial isolates from oil polluted Red Sea water in Egypt, designated as RS-Y1 and RS-F3, were found capable of degrading Belayim mix (BX) crude oil. Strains RS-Y1 and RS-F3 were assigned to the genera Lipomyces tetrasporus and Paecilomyces variotii based on their morphological and physiological characteristics. Both isolates were compared for the biodegradation of crude petroleum-oil hydrocarbons in basal salt medium supplemented with 5% (w/v) of BX-crude oil. Gas chromatography profile showed that the biodegradation of total petroleum hydrocarbons (TPHs) inoculated with L. tetrasporus (68.3%) and P. variotii (58.15%) along with their consortium (66%) significantly reduced TPHs levels as compared to the control after 30days. L. tetrasporus (44.5%) was more effective than P. variotii strain (32.89%) in reducing the unresolved complex mixtures (UCM) content from the medium. Both isolates exhibited a strong growth over a wide range of salinity (5-45g/L NaCl). Copyright © 2016 Elsevier Ltd. All rights reserved.

  7. Draft Genome Sequences of TwoThiomicrospiraStrains Isolated from the Brine-Seawater Interface of Kebrit Deep in the Red Sea

    KAUST Repository

    Zhang, Guishan

    2016-03-11

    Two Thiomicrospira strains, WB1 and XS5, were isolated from the Kebrit Deep brine-seawater interface in the Red Sea, Saudi Arabia. Here, we present the draft genome sequences of these gammaproteobacteria, which both produce sulfuric acid from thiosulfate in culture.

  8. Biological Activities and Chemical Composition of Methanolic Extracts of Selected Autochthonous Microalgae Strains from the Red Sea.

    Science.gov (United States)

    Pereira, Hugo; Custódio, Luísa; Rodrigues, Maria João; de Sousa, Carolina Bruno; Oliveira, Marta; Barreira, Luísa; Neng, Nuno da Rosa; Nogueira, José Manuel Florêncio; Alrokayan, Salman A; Mouffouk, Fouzi; Abu-Salah, Khalid M; Ben-Hamadou, Radhouan; Varela, João

    2015-06-03

    Four lipid-rich microalgal species from the Red Sea belonging to three different genera (Nannochloris, Picochlorum and Desmochloris), previously isolated as novel biodiesel feedstocks, were bioprospected for high-value, bioactive molecules. Methanol extracts were thus prepared from freeze-dried biomass and screened for different biological activities. Nannochloris sp. SBL1 and Desmochloris sp. SBL3 had the highest radical scavenging activity against 1,1-diphenyl-2-picrylhydrazyl, and the best copper and iron chelating activities. All species had potent butyrylcholinesterase inhibitory activity (>50%) and mildly inhibited tyrosinase. Picochlorum sp. SBL2 and Nannochloris sp. SBL4 extracts significantly reduced the viability of tumoral (HepG2 and HeLa) cells with lower toxicity against the non-tumoral murine stromal (S17) cells. Nannochloris sp. SBL1 significantly reduced the viability of Leishmania infantum down to 62% (250 µg/mL). Picochlorum sp. SBL2 had the highest total phenolic content, the major phenolic compounds identified being salicylic, coumaric and gallic acids. Neoxanthin, violaxanthin, zeaxanthin, lutein and β-carotene were identified in the extracts of all strains, while canthaxanthin was only identified in Picochlorum sp. SBL2. Taken together, these results strongly suggest that the microalgae included in this work could be used as sources of added-value products that could be used to upgrade the final biomass value.

  9. Biological Activities and Chemical Composition of Methanolic Extracts of Selected Autochthonous Microalgae Strains from the Red Sea

    Directory of Open Access Journals (Sweden)

    Hugo Pereira

    2015-06-01

    Full Text Available Four lipid-rich microalgal species from the Red Sea belonging to three different genera (Nannochloris, Picochlorum and Desmochloris, previously isolated as novel biodiesel feedstocks, were bioprospected for high-value, bioactive molecules. Methanol extracts were thus prepared from freeze-dried biomass and screened for different biological activities. Nannochloris sp. SBL1 and Desmochloris sp. SBL3 had the highest radical scavenging activity against 1,1-diphenyl-2-picrylhydrazyl, and the best copper and iron chelating activities. All species had potent butyrylcholinesterase inhibitory activity (>50% and mildly inhibited tyrosinase. Picochlorum sp. SBL2 and Nannochloris sp. SBL4 extracts significantly reduced the viability of tumoral (HepG2 and HeLa cells with lower toxicity against the non-tumoral murine stromal (S17 cells. Nannochloris sp. SBL1 significantly reduced the viability of Leishmania infantum down to 62% (250 µg/mL. Picochlorum sp. SBL2 had the highest total phenolic content, the major phenolic compounds identified being salicylic, coumaric and gallic acids. Neoxanthin, violaxanthin, zeaxanthin, lutein and β-carotene were identified in the extracts of all strains, while canthaxanthin was only identified in Picochlorum sp. SBL2. Taken together, these results strongly suggest that the microalgae included in this work could be used as sources of added-value products that could be used to upgrade the final biomass value.

  10. Biological Activities and Chemical Composition of Methanolic Extracts of Selected Autochthonous Microalgae Strains from the Red Sea

    Science.gov (United States)

    Pereira, Hugo; Custódio, Luísa; Rodrigues, Maria João; Bruno de Sousa, Carolina; Oliveira, Marta; Barreira, Luísa; Neng, Nuno da Rosa; Nogueira, José Manuel Florêncio; Alrokayan, Salman A.; Mouffouk, Fouzi; Abu-Salah, Khalid M.; Ben-Hamadou, Radhouan; Varela, João

    2015-01-01

    Four lipid-rich microalgal species from the Red Sea belonging to three different genera (Nannochloris, Picochlorum and Desmochloris), previously isolated as novel biodiesel feedstocks, were bioprospected for high-value, bioactive molecules. Methanol extracts were thus prepared from freeze-dried biomass and screened for different biological activities. Nannochloris sp. SBL1 and Desmochloris sp. SBL3 had the highest radical scavenging activity against 1,1-diphenyl-2-picrylhydrazyl, and the best copper and iron chelating activities. All species had potent butyrylcholinesterase inhibitory activity (>50%) and mildly inhibited tyrosinase. Picochlorum sp. SBL2 and Nannochloris sp. SBL4 extracts significantly reduced the viability of tumoral (HepG2 and HeLa) cells with lower toxicity against the non-tumoral murine stromal (S17) cells. Nannochloris sp. SBL1 significantly reduced the viability of Leishmania infantum down to 62% (250 µg/mL). Picochlorum sp. SBL2 had the highest total phenolic content, the major phenolic compounds identified being salicylic, coumaric and gallic acids. Neoxanthin, violaxanthin, zeaxanthin, lutein and β-carotene were identified in the extracts of all strains, while canthaxanthin was only identified in Picochlorum sp. SBL2. Taken together, these results strongly suggest that the microalgae included in this work could be used as sources of added-value products that could be used to upgrade the final biomass value. PMID:26047482

  11. Complete Genome Sequence of the Hyperthermophilic Archaeon Pyrococcus sp. Strain ST04, Isolated from a Deep-Sea Hydrothermal Sulfide Chimney on the Juan de Fuca Ridge

    Science.gov (United States)

    Jung, Jong-Hyun; Lee, Ju-Hoon; Holden, James F.; Seo, Dong-Ho; Shin, Hakdong; Kim, Hae-Yeong; Kim, Wooki; Ryu, Sangryeol

    2012-01-01

    Pyrococcus sp. strain ST04 is a hyperthermophilic, anaerobic, and heterotrophic archaeon isolated from a deep-sea hydrothermal sulfide chimney on the Endeavour Segment of the Juan de Fuca Ridge in the northeastern Pacific Ocean. To further understand the distinct characteristics of this archaeon at the genome level (polysaccharide utilization at high temperature and ATP generation by a Na+ gradient), the genome of strain ST04 was completely sequenced and analyzed. Here, we present the complete genome sequence analysis results of Pyrococcus sp. ST04 and report the major findings from the genome annotation, with a focus on its saccharolytic and metabolite production potential. PMID:22843576

  12. In vitro antibacterial activity of venom protein isolated from sea snake Enhydrina schistosa against drug-resistant human pathogenic bacterial strains

    Institute of Scientific and Technical Information of China (English)

    Palani Damotharan; Anguchamy Veeruraj; Muthuvel Arumugam; Thangavel Balasubramanian

    2015-01-01

    Objective:To evaluate the antibacterial activity of sea snake (Enhydrina schistosa) venom protein against drug-resistant human pathogenic bacterial strains. Methods:The venom was collected by milking process from the live specimens of sea snake are using capillary tubes or glass plates. Venom was purified by ion exchange chromatography and it was tested for in-vitro antibacterial activity against 10 drug-resistant human pathogenic bacterial strains using the standard disc diffusion method. Results:The notable antibacterial activity was observed at 150 µg/mL concentration of purified venom and gave its minimum inhibitory concentrations values exhibited between 200-100 µg/mL against all the tested bacterial strains. The maximum zone of inhibition was observed at 16.4 mm against Salmonella boydii and the minimum activity was observed at 7.5 mm against Pseudomonas aeruginosa. After the sodium-dodecyl-sulfate-polyacrylamide gel electrophoresis there were a clear single band was detected in the gel that corresponding to purified venom protein molecular weight of 44 kDa. Conclusions:These results suggested that the sea snake venom might be a feasible source for searching potential antibiotics agents against human pathogenic diseases.

  13. A less saline Baltic Sea promotes cyanobacterial growth, hampers intracellular microcystin production, and leads to strain-specific differences in allelopathy.

    Science.gov (United States)

    Brutemark, Andreas; Vandelannoote, Angélique; Engström-Öst, Jonna; Suikkanen, Sanna

    2015-01-01

    Salinity is one of the main factors that explain the distribution of species in the Baltic Sea. Increased precipitation and consequent increase in freshwater inflow is predicted to decrease salinity in some areas of the Baltic Sea. Clearly such changes may have profound effects on the organisms living there. Here we investigate the response of the commonly occurring cyanobacterium Dolichospermum spp. to three salinities, 0, 3 and 6. For the three strains tested we recorded growth, intracellular toxicity (microcystin) and allelopathic properties. We show that Dolichospermum can grow in all the three salinities tested with highest growth rates in the lowest salinity. All strains showed allelopathic potential and it differed significantly between strains and salinities, but was highest in the intermediate salinity and lowest in freshwater. Intracellular toxin concentration was highest in salinity 6. In addition, based on monitoring data from the northern Baltic Proper and the Gulf of Finland, we show that salinity has decreased, while Dolichospermum spp. biomass has increased between 1979 and 2013. Thus, based on our experimental findings it is evident that salinity plays a large role in Dolichospermum growth, allelopathic properties and toxicity. In combination with our long-term data analyses, we conclude that decreasing salinity is likely to result in a more favourable environment for Dolichospermum spp. in some areas of the Baltic Sea.

  14. A less saline Baltic Sea promotes cyanobacterial growth, hampers intracellular microcystin production, and leads to strain-specific differences in allelopathy.

    Directory of Open Access Journals (Sweden)

    Andreas Brutemark

    Full Text Available Salinity is one of the main factors that explain the distribution of species in the Baltic Sea. Increased precipitation and consequent increase in freshwater inflow is predicted to decrease salinity in some areas of the Baltic Sea. Clearly such changes may have profound effects on the organisms living there. Here we investigate the response of the commonly occurring cyanobacterium Dolichospermum spp. to three salinities, 0, 3 and 6. For the three strains tested we recorded growth, intracellular toxicity (microcystin and allelopathic properties. We show that Dolichospermum can grow in all the three salinities tested with highest growth rates in the lowest salinity. All strains showed allelopathic potential and it differed significantly between strains and salinities, but was highest in the intermediate salinity and lowest in freshwater. Intracellular toxin concentration was highest in salinity 6. In addition, based on monitoring data from the northern Baltic Proper and the Gulf of Finland, we show that salinity has decreased, while Dolichospermum spp. biomass has increased between 1979 and 2013. Thus, based on our experimental findings it is evident that salinity plays a large role in Dolichospermum growth, allelopathic properties and toxicity. In combination with our long-term data analyses, we conclude that decreasing salinity is likely to result in a more favourable environment for Dolichospermum spp. in some areas of the Baltic Sea.

  15. High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China

    Science.gov (United States)

    Zhou, Yu; Li, Rui; Gao, Xiao-Yang; Lapidus, Alla; Han, James; Haynes, Matthew; Lobos, Elizabeth; Huntemann, Marcel; Pati, Amrita; Ivanova, Natalia N.; Rohde, Manfred; Mavromatis, Konstantinos; Tindall, Brian J.; Markowitz, Victor; Woyke, Tanja; Klenk, Hans-Peter; Kyrpides, Nikos C.; Li, Wen-Jun

    2014-01-01

    Halomonas zhanjiangensis Chen et al. 2009 is a member of the genus Halomonas, family Halomonadaceae, class Gammaproteobacteria. Representatives of the genus Halomonas are a group of halophilic bacteria often isolated from salty environments. The type strain H. zhanjiangensis JSM 078169T was isolated from a sea urchin (Hemicentrotus pulcherrimus) collected from the South China Sea. The genome of strain JSM 078169T is the fourteenth sequenced genome in the genus Halomonas and the fifteenth in the family Halomonadaceae. The other thirteen genomes from the genus Halomonas are H. halocynthiae, H. venusta, H. alkaliphila, H. lutea, H. anticariensis, H. jeotgali, H. titanicae, H. desiderata, H. smyrnensis, H. salifodinae, H. boliviensis, H. elongata and H stevensii. Here, we describe the features of strain JSM 078169T, together with the complete genome sequence and annotation from a culture of DSM 21076T. The 4,060,520 bp long draft genome consists of 17 scaffolds with the 3,659 protein-coding and 80 RNA genes and is a part of Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project. PMID:25197480

  16. High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169(T) (DSM 21076(T)) from a sea urchin in southern China.

    Science.gov (United States)

    Zhou, Yu; Li, Rui; Gao, Xiao-Yang; Lapidus, Alla; Han, James; Haynes, Matthew; Lobos, Elizabeth; Huntemann, Marcel; Pati, Amrita; Ivanova, Natalia N; Rohde, Manfred; Mavromatis, Konstantinos; Tindall, Brian J; Markowitz, Victor; Woyke, Tanja; Klenk, Hans-Peter; Kyrpides, Nikos C; Li, Wen-Jun

    2014-06-15

    Halomonas zhanjiangensis Chen et al. 2009 is a member of the genus Halomonas, family Halomonadaceae, class Gammaproteobacteria. Representatives of the genus Halomonas are a group of halophilic bacteria often isolated from salty environments. The type strain H. zhanjiangensis JSM 078169(T) was isolated from a sea urchin (Hemicentrotus pulcherrimus) collected from the South China Sea. The genome of strain JSM 078169(T) is the fourteenth sequenced genome in the genus Halomonas and the fifteenth in the family Halomonadaceae. The other thirteen genomes from the genus Halomonas are H. halocynthiae, H. venusta, H. alkaliphila, H. lutea, H. anticariensis, H. jeotgali, H. titanicae, H. desiderata, H. smyrnensis, H. salifodinae, H. boliviensis, H. elongata and H stevensii. Here, we describe the features of strain JSM 078169(T), together with the complete genome sequence and annotation from a culture of DSM 21076(T). The 4,060,520 bp long draft genome consists of 17 scaffolds with the 3,659 protein-coding and 80 RNA genes and is a part of Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project.

  17. Molecular typing of Escherichia coli strains associated with threatened sea ducks and near-shore marine habitats of south-west Alaska

    Science.gov (United States)

    Hollmén, Tuula E.; Debroy, C.; Flint, P.L.; Safine, D.E.; Schamber, J.L.; Riddle, A.E.; Trust, K.A.

    2011-01-01

    In Alaska, sea ducks winter in coastal habitats at remote, non-industrialized areas, as well as in proximity to human communities and industrial activity. We evaluated prevalence and characteristics of Escherichia coli strains in faecal samples of Steller's eiders (Polysticta stelleri; n=122) and harlequin ducks (Histrionicus histrionicus; n=21) at an industrialized site and Steller's eiders (n=48) at a reference site, and compared these strains with those isolated from water samples from near-shore habitats of ducks. The overall prevalence of E. coli was 16% and 67% in Steller's eiders and harlequin ducks, respectively, at the industrialized study site, and 2% in Steller's eiders at the reference site. Based on O and H antigen subtyping and genetic characterization by enterobacterial repetitive intergenic consensus polymerase chain reaction and pulsed-field gel electrophoresis, we found evidence of avian pathogenic E. coli (APEC) strains associated with both species and detected E. coli strains carrying virulence genes associated with mammals in harlequin ducks. Steller's eiders that carried APEC had lower serum total protein and albumin concentrations, providing further evidence of pathogenicity. The genetic profile of two E. coli strains from water matched an isolate from a Steller's eider providing evidence of transmission between near-shore habitats and birds. ?? 2010 Society for Applied Microbiology and Blackwell Publishing Ltd.

  18. Patterns of ecological specialization among microbial populations in the Red Sea and diverse oligotrophic marine environments

    KAUST Repository

    Thompson, Luke R

    2013-05-11

    Large swaths of the nutrient-poor surface ocean are dominated numerically by cyanobacteria (Prochlorococcus), cyanobacterial viruses (cyanophage), and alphaproteobacteria (SAR11). How these groups thrive in the diverse physicochemical environments of different oceanic regions remains poorly understood. Comparative metagenomics can reveal adaptive responses linked to ecosystem-specific selective pressures. The Red Sea is well-suited for studying adaptation of pelagic-microbes, with salinities, temperatures, and light levels at the extreme end for the surface ocean, and low nutrient concentrations, yet no metagenomic studies have been done there. The Red Sea (high salinity, high light, low N and P) compares favorably with the Mediterranean Sea (high salinity, low P), Sargasso Sea (low P), and North Pacific Subtropical Gyre (high light, low N). We quantified the relative abundance of genetic functions among Prochlorococcus, cyanophage, and SAR11 from these four regions. Gene frequencies indicate selection for phosphorus acquisition (Mediterranean/Sargasso), DNA repair and high-light responses (Red Sea/Pacific Prochlorococcus), and osmolyte C1 oxidation (Red Sea/Mediterranean SAR11). The unexpected connection between salinity-dependent osmolyte production and SAR11 C1 metabolism represents a potentially major coevolutionary adaptation and biogeochemical flux. Among Prochlorococcus and cyanophage, genes enriched in specific environments had ecotype distributions similar to nonenriched genes, suggesting that inter-ecotype gene transfer is not a major source of environment-specific adaptation. Clustering of metagenomes using gene frequencies shows similarities in populations (Red Sea with Pacific, Mediterranean with Sargasso) that belie their geographic distances. Taken together, the genetic functions enriched in specific environments indicate competitive strategies for maintaining carrying capacity in the face of physical stressors and low nutrient availability. 2013 The

  19. Patterns of ecological specialization among microbial populations in the Red Sea and diverse oligotrophic marine environments.

    Science.gov (United States)

    Thompson, Luke R; Field, Chris; Romanuk, Tamara; Ngugi, David; Siam, Rania; El Dorry, Hamza; Stingl, Ulrich

    2013-06-01

    Large swaths of the nutrient-poor surface ocean are dominated numerically by cyanobacteria (Prochlorococcus), cyanobacterial viruses (cyanophage), and alphaproteobacteria (SAR11). How these groups thrive in the diverse physicochemical environments of different oceanic regions remains poorly understood. Comparative metagenomics can reveal adaptive responses linked to ecosystem-specific selective pressures. The Red Sea is well-suited for studying adaptation of pelagic-microbes, with salinities, temperatures, and light levels at the extreme end for the surface ocean, and low nutrient concentrations, yet no metagenomic studies have been done there. The Red Sea (high salinity, high light, low N and P) compares favorably with the Mediterranean Sea (high salinity, low P), Sargasso Sea (low P), and North Pacific Subtropical Gyre (high light, low N). We quantified the relative abundance of genetic functions among Prochlorococcus, cyanophage, and SAR11 from these four regions. Gene frequencies indicate selection for phosphorus acquisition (Mediterranean/Sargasso), DNA repair and high-light responses (Red Sea/Pacific Prochlorococcus), and osmolyte C1 oxidation (Red Sea/Mediterranean SAR11). The unexpected connection between salinity-dependent osmolyte production and SAR11 C1 metabolism represents a potentially major coevolutionary adaptation and biogeochemical flux. Among Prochlorococcus and cyanophage, genes enriched in specific environments had ecotype distributions similar to nonenriched genes, suggesting that inter-ecotype gene transfer is not a major source of environment-specific adaptation. Clustering of metagenomes using gene frequencies shows similarities in populations (Red Sea with Pacific, Mediterranean with Sargasso) that belie their geographic distances. Taken together, the genetic functions enriched in specific environments indicate competitive strategies for maintaining carrying capacity in the face of physical stressors and low nutrient availability.

  20. Genomic Characterization of Two Novel SAR11 Isolates From the Red Sea, Including the First Strain of the SAR11 Ib clade

    KAUST Repository

    Jimenez Infante, Francy M.

    2017-06-22

    The SAR11 clade (Pelagibacterales) is a diverse group that forms a monophyletic clade within the Alphaproteobacteria, and constitutes up to one third of all prokaryotic cells in the photic zone of most oceans. Pelagibacterales are very abundant in the warm and highly saline surface waters of the Red Sea, raising the question of adaptive traits of SAR11 populations in this water body and warmer oceans through the world. In this study, two pure cultures were successfully obtained from surface waters on the Red Sea, one isolate of subgroup Ia and one of the previously uncultured SAR11 Ib lineage. The novel genomes were very similar to each other and to genomes of isolates of SAR11 subgroup Ia (Ia pan-genome), both in terms of gene content and synteny. Among the genes that were not present in the Ia pan-genome, 108 (RS39, Ia) and 151 genes (RS40, Ib) were strain-specific. Detailed analyses showed that only 51 (RS39, Ia) and 55 (RS40, Ib) of these strain-specific genes had not reported before on genome fragments of Pelagibacterales. Further analyses revealed the potential production of phosphonates by some SAR11 members and possible adaptations for oligotrophic life, including pentose sugar utilization and adhesion to marine particulate matter.

  1. ANTILISTERIAL ACTYVITY OF LACTIC ACID BACTERIA ISOLATED FROM GILTHEAD BREAMS AND SEA BASSES FILLETS PACKAGED MAP AGAINST PRIMITIVE STRAINS OF LISTERIA MONOCYTOGENES

    Directory of Open Access Journals (Sweden)

    M. Barile

    2011-04-01

    Full Text Available Listeria monocytogenes is the causative agent of listeriosis typically caused by ready-to-eat processed food that have a refrigerated shelf-life, but lightly preserved fish products also belong to a high-risk category. Aim of the work was to evaluate antimicrobial activity linked bacteriocin-producing of LAB isolated from gilthead breams and sea basses fillets packaged in modified atmospheres. Fifty-five LAB strains were screened against 21 strains of Listeria monocytogenes, 1 Listeria innocua held in the culture collection of Department of Zootechnical Sciences and Food Ispection (SIA and submitted to antagonistic activity using the spot on lawn and the agar well diffusion assay. Lactococcus lactis sub. lactis Sa31 was able to produce bacteriocin in agar and different broth medium. The bacteriocin man31 showed sensitivity to trypsin, pronase E and papain, inactivation at temperatures ≥ 100°C, bactericidal mode of action and antilisterial act, rapidly. The bacteriocin man31 caused a reduction of L. monocytogenes ½ c growth about log10 > 3 UFC/ml, when was applied on indicator strain at 20,480 AU/ml concentration, in vitro.

  2. Localised mixing and heterogeneity in the plankton food web in a frontal region of the Sargasso Sea

    DEFF Research Database (Denmark)

    Richardson, Katherine; Bendtsen, Joøgen; Christensen, Jens Tang

    2014-01-01

    the diatom communities at 10 m and > 100 m (in the deep chlorophyll maximum, DCM) than in other parts of the frontal region. Thorpe displacements supported the hypothesis of elevated mixing intensities around these stations, as did vertical mixing rates inferred from stratification and vertical current shear...... influence the plankton food web, as indicated by elevated values/concentrations of (1) primary production, (2) variable fluorescence (F-v/F-m) and (3) total seston. In addition, the fraction of the total biomass of both copepods and nauplii found closest to the DCM in the frontal region correlated...

  3. Distribution and production of plankton communities in the subtropical convergence zone of the Sargasso Sea. I. Phytoplankton and bacterioplankton

    DEFF Research Database (Denmark)

    Riemann, Lasse; Nielsen, Torkel Gissel; Kragh, Theis

    2011-01-01

    . With the aim of improving the understanding of physical and lower trophic level processes in the area, we carried out field studies of physical, chemical and biological characteristics along 3 transects crossing thermal fronts associated with the STCZ in March to April 2007. Thermal and chemical stratification...

  4. Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea

    DEFF Research Database (Denmark)

    Carlson, Craig A; Morris, Robert; Parsons, Rachel

    2009-01-01

    Bacterioplankton belonging to the SAR11 clade of a-proteobacteria were counted by fluorescence in situ hybridization (FISH) over eight depths in the surface 300 m at the Bermuda Atlantic Time-series Study (BATS) site from 2003 to 2005. SAR11 are dominant heterotrophs in oligotrophic systems; thus...... correlated with seasonal mixing and stratification of the water column. Terminal restriction fragment length polymorphism (T-RFLP) data generated from a decade of samples collected at BATS were combined with the FISH data to model the annual dynamics of SAR11 subclade populations. 16S rRNA gene clone...

  5. Localised mixing and heterogeneity in the plankton food web in a frontal region of the Sargasso Sea

    DEFF Research Database (Denmark)

    Richardson, Katherine; Bendtsen, Joøgen; Christensen, Jens Tang

    2014-01-01

    Previous studies have demonstrated that patches of eel larvae are found in the frontal region of the Subtropical Convergence Zone (STCZ), but to date no clear evidence of why this region might confer advantage to the larvae has been presented. This study demonstrates that there may be localized p...

  6. Localised mixing and heterogeneity in the plankton food web in a frontal region of the Sargasso Sea

    DEFF Research Database (Denmark)

    Richardson, Katherine; Bendtsen, Joøgen; Christensen, Jens Tang;

    2014-01-01

    influence the plankton food web, as indicated by elevated values/concentrations of (1) primary production, (2) variable fluorescence (F-v/F-m) and (3) total seston. In addition, the fraction of the total biomass of both copepods and nauplii found closest to the DCM in the frontal region correlated...

  7. Evidence for aggregation and export of cyanobacteria and nano-eukaryotes from the Sargasso Sea euphotic zone

    Directory of Open Access Journals (Sweden)

    M. W. Lomas

    2011-01-01

    Full Text Available Pico-plankton and nano-plankton are generally thought to represent a negligible fraction of the total particulate organic carbon (POC export flux in oligotrophic gyres due to their small size, slow individual sinking rates, and tight grazer control that leads to high rates of recycling in the euphotic zone. Based upon recent inverse modeling and network analysis however, it has been hypothesized that pico-plankton, including the cyanobacteria Synechococcus and Prochlorococcus, and nano-plankton contribute significantly to POC export, via formation and gravitational settling of aggregates and/or consumption of those aggregates by mesozooplankton, in proportion to their contribution to net primary production. This study presents total suspended particulate (>0.7 μm and particle size-fractionated (10–20 μm, 20–53 μm, >53 μm pigment concentrations from within and below the euphotic zone in the oligotrophic subtropical North Atlantic, collected using Niskin bottles and large volume in-situ pumps, respectively. Results show the indicator pigments for Synechococcus, Prochlorococcus and nano-eukaryotes are; (1 found at depths down to 500 m, and; (2 essentially constant, relative to the sum of all indicator pigments, across particle size fractions ranging from 10 μm to >53 μm. Based upon the presence of chlorophyll precursor and degradation pigments, and that in situ pumps do not effectively sample fecal pellets, it is concluded that these pigments were redistributed to deeper waters on larger, more rapidly sinking aggregates likely by gravitational settling and/or convective mixing. Using available pigment and ancillary data from these cruises, these Synechococcus, Prochlorococcus and nano-plankton derived aggregates are estimated to contribute 2–13% (5 ± 4%, 1–20% (5 ± 7%, and 6–43% (23 ± 14% of the total sediment trap POC flux measured on the same cruises, respectively. Furthermore, nano-eukaryotes contribute equally to POC export and autotrophic biomass, while cyanobacteria contributions to POC export are one-tenth of their contribution to autotrophic biomass. These field observations provide direct evidence that pico- and nano-plankton represent a significant contribution to the total POC export via formation of aggregates in this oligotrophic ocean gyre. We suggest that aggregate formation and fate should be included in ecosystem models, particularly as oligotrophic regions are hypothesized to expand in areal extent with warming and increased stratification in the future.

  8. Spring-summer imbalance of dissolved inorganic carbon in the mixed layer of the northwestern Sargasso Sea

    Energy Technology Data Exchange (ETDEWEB)

    Marchal, O.; Monfray, P. [Centre National de la Recherche Scientifique (CNRS), 91 - Gif-sur-Yvette (France). Centre des Faibles Radioactivites; Bates, N.R. [Bermuda Biological Station for Research, Ferry Reach (Bermuda)

    1995-02-01

    The surface concentration of dissolved inorganic carbon (DIC) at the Bermuda Atlantic Time-series Study site (BATS) decreased gradually by ca. 30 {mu}mol kg{sup -1} from April to October in 1989. This decrease occurred almost in the absence of measurable nitrate in the mixed layer. Although ancillary data about the C system point to the possible importance of lateral transport, horizontal gradients in surface DIC and the mean flow in the area indicate that local effects should prevail in the seasonal drawdown of DIC. On the basis of an one-dimensional model, we hence estimate the mixed layer budget of DIC for this period, from surface data, temperature profiles, and concomitant meteorological records. According to model uncertainties, the drawdown should be mostly explained (71-93%) by a net community production (NCP) averaging 1.4-2.3 mgC m{sup -3} d{sup -1}, and to a lesser extent, by outgassing of CO{sub 2} to the atmosphere. These losses are partially compensated by mixing with DIC-rich waters of the thermocline. This NCP must be regarded as a lower estimate, since the mean flow from the northeast should bring waters with slightly higher DIC to the mixed layer at the BATS site. The model, which is sensitive to short-term variations in atmospheric forcing (<1 day), indicates that this layer has never reached the nitrocline for spring-summer 1989, even as a hurricane passed through the region. Hence, the surface NCP should not have been supported by unsampled, pulse-like supplies of deep nutrients. Wet atmospheric deposition of nitrogen measured concurrently on Bermuda could contribute to the biological N requirement. According to historical estimates, N{sub 2} fixation seems however insufficient to meet the remaining demand. Comparison between NCP and primary production measured in situ suggests that most of photosynthetically fixed C is not respired in the mixed layer. 77 refs, 10 figs, 2 tabs

  9. Evidence for aggregation and export of cyanobacteria and nano-eukaryotes from the Sargasso Sea euphotic zone

    Directory of Open Access Journals (Sweden)

    M. W. Lomas

    2010-09-01

    Full Text Available Pico-plankton and nano-plankton are generally thought to represent a negligible fraction of the total particulate organic carbon (POC export flux in oligotrophic gyres due to their small size, slow individual sinking rates, and tight grazer control that leads to high rates of recycling in the euphotic zone. Based upon recent inverse modeling and network analysis however, it has been hypothesized that pico-plankton, including the cyanobacteria Synechococcus and Prochlorococcus, and nano-plankton contribute significantly to POC export, via formation of aggregates and consumption of those aggregates by mesozooplankton, in proportion to their contribution to net primary production. This study presents total suspended particulate (> 0.7 μm and particle size-fractionated (10–20 μm, 20–53 μm, > 53 μm pigment concentrations from within and below the euphotic zone in the oligotrophic subtropical North Atlantic, collected using Niskin bottles and large volume in-situ pumps, respectively. Results show the indicator pigments for Synechococcus, Prochlorococcus and nano-eukaryotes are; (1 found at depths down to 500 m, and; (2 essentially constant, relative to the sum of all indicator pigments, across particle size fractions ranging from 10 μm to > 53 μm. Based upon the presence of chlorophyll precursor and degradation pigments, and that in-situ pumps do not effectively sample fecal pellets, it is concluded that these pigments were redistributed to deeper waters on larger, more rapidly sinking aggregates. Using available pigment data and ancillary cruise data, these Synechococcus, Prochlorococcus and nano-plankton derived aggregates are estimated to contribute 2–13% (5 ± 4%, 1–20% (5 ± 7%, and 6–43% (23 ± 14% of the total sediment trap POC flux measured on the same cruises, respectively. Furthermore, nano-eukaryotes contribute equally to POC export and autotrophic biomass, while cyanobacteria contributions to POC export are one-tenth of their contribution to autotrophic biomass. These field observations provide direct evidence that pico- and nano-plankton represent a significant contribution to the total POC export in this oligotrophic ocean gyre. We suggest that this pathway should be included in ecosystem models, particularly as oligotrophic regions are hypothesized to expand in areal extent with warming and increased stratification in the future.

  10. Empirical observations of the spawning migration of European eels: The long and dangerous road to the Sargasso Sea

    DEFF Research Database (Denmark)

    Righton, David; Westerberg, H.; Feunteun, E.;

    2016-01-01

    Fresh data on the timing and speed of the oceanic spawning migration of European eels suggest a new paradigm for spawning ecology.......Fresh data on the timing and speed of the oceanic spawning migration of European eels suggest a new paradigm for spawning ecology....

  11. Temporal dynamics of dissolved combined neutral sugars and the quality of dissolved organic matter in the Northwestern Sargasso Sea

    Science.gov (United States)

    Goldberg, Stuart J.; Carlson, Craig A.; Hansell, Dennis A.; Nelson, Norm B.; Siegel, David A.

    2009-05-01

    The dynamics of dissolved combined neutral sugars (DCNS) were assessed in the upper 250 m at the Bermuda Atlantic Time-series Study (BATS) site between 2001 and 2004. Our results reveal a regular annual pattern of DCNS accumulation with concentrations increasing at a rate of 0.009-0.012 μmol C L -1 d -1 in the surface 40 m from March to July and reaching maximum mean concentrations of 2.2-3.3 μmol C L -1. Winter convective mixing (between January and March) annually exported surface-accumulated DCNS to the upper mesopelagic zone (100-250 m), as concentrations increased there by 0.3-0.6 μmol C L -1. The exported DCNS was subsequently removed over a period of weeks following restratification of the water column. Vertical and temporal trends in DCNS yield (% of DOC) supported its use as a diagenetic indicator of DOM quality. Higher DCNS yields in surface waters suggested a portion of the DOM accumulated relatively recently compared to the more recalcitrant material of the upper mesopelagic that had comparably lower yields. DCNS yields and mol% neutral sugar content, together, indicated differences in the diagenetic state of the surface-accumulated and deep pools of DOM. Seasonally accumulated, recently produced DOM with higher DCNS yields was characterized by elevated mol% of galactose and mannose+xylose levels. Conversely, more recalcitrant DOM from depths >100 m had lower DCNS yields but higher mol% of glucose. Lower DCNS yields and elevated mol% glucose were also observed in the surface waters during winter convective mixing, indicating an entrainment of a diagenetically altered DOM pool into the upper 100 m. A multivariate statistical analysis confirms the use of DCNS as an index of shifts in DOM quality at this site.

  12. Morphological and toxicity characteristics of Pseudo-nitzschia pungens strain PP0201-01 isolated from the East China Sea

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    The morphology and toxicity of Pseudo-nitzschia strain PP0201-01, isolated near the estuary of Changjiang (Yangtze) River in Year 2002 and tentatively identified as Pseudo-nitzschia pungens, were studied.The strain was identified morphologically as P. pungens using scanning electronic microscope (SEM). The analytical results of LC-PDA (liquid chromatography with photodiode array detector), LC-MS (liquid chromatography with mass detector), and the toxicity data from mouse bioassay, showed that no domoic acid was produced by the strain. However, the mechanism of domoic acid production by Pseudo-nitzschia species is complicated.More works are needed to assess the toxic species and to evaluate the potential risk of amnesic shellfish poisoning (ASP) in China.

  13. Distributions of phospholipid and glycolipid fatty acids in two strains of different functional Erythrobacter sp.isolated from South China Sea

    Institute of Scientific and Technical Information of China (English)

    Huan YANG; Xiangru MA; Qiang LI; Nianzhi JIAO; Shucheng XIE

    2009-01-01

    The comparison of the fatty acids between aerobic anoxygenic phototrophic bacteria (AAPB) and their phylogenetic relatives has been a fascinating but yet enigmatic topic, enhancing our understanding of physiological variations between these evolutionarily related microorganisms. Two strains of marine bacteria, both phylogenetically falling into Erythrobacter sp., were isolated from the South China Sea, and demonstrated, respectively, to be an aerobic anoxygenic phototrophic bacteria (AAPB) (JL475) which is capable of anoxygenic photosynthesis via BChl a, and an obligate heterotroph (JL316) with a lack of BChl a, on the basis ofphylogenetic analysis and pure culture cultivation. Phospholipid fatty acids (PLFA) and glycolipid fatty acids (GLFA) of the two swains were extracted and analyzed by gas chromatographymass spectrometry. The PLFA in JL475 AAPB arecharacterized by C18:1, C18:2w7,13 and C18:0, with the C18:2w7,13 being a specific compound for AAPB and in particular for Erythrobacter longus and some of its phylogenetically closely related relatives. The JL316 strain is characterized in PLFA by the presence of C18:1, C16:1and C16:1, and in particular C17:1. GLFA do not show any discrimination between the two strains. Four α,wdicarboxylic acids, including 1,8-octanedioic acid, 1,9-nonanedioic acid, 1,10-decanedioic acid and 1,11-undecanedioic acid, are present only in JL316 GLFA, presumably derived from metabolic products. C14-C16 2-hydroxy fatty acids were found in the two strains, probably assuming a similar function of their LPS in outer membranes.

  14. Differences in cardiovascular risk profile between electrocardiographic hypertrophy versus strain in asymptomatic patients with aortic stenosis (from SEAS data)

    DEFF Research Database (Denmark)

    Greve, Anders M; Gerdts, Eva; Boman, Kurt;

    2011-01-01

    Electrocardiograms are routinely obtained in clinical follow-up of patients with asymptomatic aortic stenosis (AS). The association with aortic valve, left ventricular (LV) response to long-term pressure load, and clinical covariates is unclear and the clinical value is thus uncertain. Data from...... clinical examination, electrocardiogram, and echocardiogram in 1,563 patients in the Simvastatin and Ezetimibe in Aortic Stenosis (SEAS) study were used. Electrocardiograms were Minnesota coded for arrhythmias and atrioventricular and intraventricular blocks; LV hypertrophy was assessed by Sokolow...

  15. Seismic imaging of deep low-velocity zone beneath the Dead Sea basin and transform fault: Implications for strain localization and crustal rigidity

    Science.gov (United States)

    ten Brink, U.S.; Al-Zoubi, A. S.; Flores, C.H.; Rotstein, Y.; Qabbani, I.; Harder, S.H.; Keller, Gordon R.

    2006-01-01

    New seismic observations from the Dead Sea basin (DSB), a large pull-apart basin along the Dead Sea transform (DST) plate boundary, show a low velocity zone extending to a depth of 18 km under the basin. The lower crust and Moho are not perturbed. These observations are incompatible with the current view of mid-crustal strength at low temperatures and with support of the basin's negative load by a rigid elastic plate. Strain softening in the middle crust is invoked to explain the isostatic compensation and the rapid subsidence of the basin during the Pleistocene. Whether the deformation is influenced by the presence of fluids and by a long history of seismic activity on the DST, and what the exact softening mechanism is, remain open questions. The uplift surrounding the DST also appears to be an upper crustal phenomenon but its relationship to a mid-crustal strength minimum is less clear. The shear deformation associated with the transform plate boundary motion appears, on the other hand, to cut throughout the entire crust. Copyright 2006 by the American Geophysical Union.

  16. Accumulation of Astaxanthin by a New Haematococcus pluvialis Strain BM1 from the White Sea Coastal Rocks (Russia

    Directory of Open Access Journals (Sweden)

    Konstantin Chekanov

    2014-08-01

    Full Text Available We report on a novel arctic strain BM1 of a carotenogenic chlorophyte from a coastal habitat with harsh environmental conditions (wide variations in solar irradiance, temperature, salinity and nutrient availability identified as Haematococcus pluvialis Flotow. Increased (25‰ salinity exerted no adverse effect on the growth of the green BM1 cells. Under stressful conditions (high light, nitrogen and phosphorus deprivation, green vegetative cells of H. pluvialis BM1 grown in BG11 medium formed non-motile palmelloid cells and, eventually, hematocysts capable of a massive accumulation of the keto-carotenoid astaxanthin with a high nutraceutical and therapeutic potential. Routinely, astaxanthin was accumulated at the level of 4% of the cell dry weight (DW, reaching, under prolonged stress, 5.5% DW. Astaxanthin was predominantly accumulated in the form of mono- and diesters of fatty acids from C16 and C18 families. The palmelloids and hematocysts were characterized by the formation of red-colored cytoplasmic lipid droplets, increasingly large in size and number. The lipid droplets tended to merge and occupied almost the entire volume of the cell at the advanced stages of stress-induced carotenogenesis. The potential application of the new strain for the production of astaxanthin is discussed in comparison with the H. pluvialis strains currently employed in microalgal biotechnology.

  17. Accumulation of astaxanthin by a new Haematococcus pluvialis strain BM1 from the white sea coastal rocks (Russia).

    Science.gov (United States)

    Chekanov, Konstantin; Lobakova, Elena; Selyakh, Irina; Semenova, Larisa; Sidorov, Roman; Solovchenko, Alexei

    2014-08-15

    We report on a novel arctic strain BM1 of a carotenogenic chlorophyte from a coastal habitat with harsh environmental conditions (wide variations in solar irradiance, temperature, salinity and nutrient availability) identified as Haematococcus pluvialis Flotow. Increased (25‰) salinity exerted no adverse effect on the growth of the green BM1 cells. Under stressful conditions (high light, nitrogen and phosphorus deprivation), green vegetative cells of H. pluvialis BM1 grown in BG11 medium formed non-motile palmelloid cells and, eventually, hematocysts capable of a massive accumulation of the keto-carotenoid astaxanthin with a high nutraceutical and therapeutic potential. Routinely, astaxanthin was accumulated at the level of 4% of the cell dry weight (DW), reaching, under prolonged stress, 5.5% DW. Astaxanthin was predominantly accumulated in the form of mono- and diesters of fatty acids from C16 and C18 families. The palmelloids and hematocysts were characterized by the formation of red-colored cytoplasmic lipid droplets, increasingly large in size and number. The lipid droplets tended to merge and occupied almost the entire volume of the cell at the advanced stages of stress-induced carotenogenesis. The potential application of the new strain for the production of astaxanthin is discussed in comparison with the H. pluvialis strains currently employed in microalgal biotechnology.

  18. Identification of Two Novel Anti-Fibrotic Benzopyran Compounds Produced by Engineered Strains Derived from Streptomyces xiamenensis M1-94P that Originated from Deep-Sea Sediments

    Directory of Open Access Journals (Sweden)

    Lei Feng

    2013-10-01

    Full Text Available The benzopyran compound obtained by cultivating a mangrove-derived strain, Streptomyces xiamenensis strain 318, shows multiple biological effects, including anti-fibrotic and anti-hypertrophic scar properties. To increase the diversity in the structures of the available benzopyrans, by means of biosynthesis, the strain was screened for spontaneous rifampicin resistance (Rif, and a mutated rpsL gene to confer streptomycin resistance (Str, was introduced into the S. xiamenensis strain M1-94P that originated from deep-sea sediments. Two new benzopyran derivatives, named xiamenmycin C (1 and D (2, were isolated from the crude extracts of a selected Str-Rif double mutant (M6 of M1-94P. The structures of 1 and 2 were identified by analyzing extensive spectroscopic data. Compounds 1 and 2 both inhibit the proliferation of human lung fibroblasts (WI26, and 1 exhibits better anti-fibrotic activity than xiamenmycin. Our study presents the novel bioactive compounds isolated from S. xiamenensis mutant strain M6 constructed by ribosome engineering, which could be a useful approach in the discovery of new anti-fibrotic compounds.

  19. Molecular Markers, MAT and Modeling: New Evidence for Leptospirosis Being Endemic in California Sea Lions, with Periodic Epizootics that Defy the Host-adapted Strain Paradigm

    Science.gov (United States)

    Leptospirosis is a zoonotic disease infecting a broad range of mammalian hosts, and is re-emerging globally in humans and domestic dogs. Disease outbreaks have occurred periodically in California sea lions (Zalophus californianus) off the central and northern coasts of California, with hundreds of a...

  20. Fermentative hydrogen production by two novel strains of Enterobacter aerogenes HGN-2 and HT 34 isolated from sea buried crude oil pipelines

    Energy Technology Data Exchange (ETDEWEB)

    Jayasinghearachchi, H.S.; Sarma, Priyangshu M.; Singh, Sneha; Mandal, Ajay K.; Lal, Banwari [Environmental and Industrial Biotechnology Division, The Energy and Resource Institute, Darbari Seth Block, Habitat Place, Lodhi Road, New Delhi 110 003 (India); Aginihotri, Anil [Corporate HSF, Oil and Natural Gas Corporation, New Delhi (India)

    2009-09-15

    Present study investigated fermentative hydrogen production of two novel isolates of Enterobacter aerogenes HGN-2 and HT 34 isolated from oil water mixtures. The two isolates were identified as novel strains of E. aerogenes based on 16S rRNA gene. The batch fermentations of two strains from glucose and xylose were carried out using economical culture medium under various conditions such as temperature, initial pH, NaCl, Ni{sup +}/Fe{sup ++}, substrate concentrations for enhanced fermentation process. Both the strains favoured wide range of pH (6.5-8.0) at 37 C for optimum production (2.20-2.23 mol H{sub 2}/mol-glucose), which occurred through acetate/butyrate pathway. At 55 C, both strains favoured 6.0-6.5 and acetate type fermentation was predominant in HT 34. Hydrogen production by HT 34 from xylose was highly pH dependant and optimum production was at pH 6.5 (circa 1.98 mol-H{sub 2}/mol-xylose) through acetate pathway. The efficiency of the strain HGN-2 at pH 6.5 was 1.92-1.94 mol-H{sub 2}/mol-xylose, and displayed both acetate and butyrate pathways. At 55 C, very low hydrogen production was detected (less than 0.5 m mol/mol-xylose). (author)

  1. Draft Genome Sequence of the Cyanobacterium Aphanizomenon flos-aquae Strain 2012/KM1/D3, Isolated from the Curonian Lagoon (Baltic Sea)

    National Research Council Canada - National Science Library

    Šulčius, Sigitas; Alzbutas, Gediminas; Kvederavičiūtė, Kotryna; Koreivienė, Judita; Zakrys, Linas; Lubys, Arvydas; Paškauskas, Ričardas

    2015-01-01

    We report here the de novo genome assembly of a cyanobacterium, Aphanizomenon flos-aquae strain 2012/KM1/D3, a harmful bloom-forming species in temperate aquatic ecosystems. The genome is 5.7 Mb with a G+C content of 38.2...

  2. Draft Genome Sequence of the Cyanobacterium Aphanizomenon flos-aquae Strain 2012/KM1/D3, Isolated from the Curonian Lagoon (Baltic Sea)

    OpenAIRE

    ?ul?ius, Sigitas; Alzbutas, Gediminas; Kvederavi?i?t?, Kotryna; Koreivien?, Judita; Zakrys, Linas; Lubys, Arvydas; Pa?kauskas, Ri?ardas

    2015-01-01

    We report here the de?novo genome assembly of a cyanobacterium, Aphanizomenon?flos-aquae strain 2012/KM1/D3, a harmful bloom-forming species in temperate aquatic ecosystems. The genome is 5.7?Mb with a G+C content of 38.2%, and it is enriched mostly with genes involved in amino acid and carbohydrate metabolism.

  3. Screen and analysis of degradation ability for crude oil degradation strains from South China Sea%南海高效石油降解菌的筛选及降解特性研究

    Institute of Scientific and Technical Information of China (English)

    姜肸; 高伟; 李倩; 崔志松; 张魁英; 郑立

    2012-01-01

    The study was performed to test the petroleum biodegradation ability of 52 bacterial strains using gravimetric method.All of these bacteria were collected from 10 samples of water from the South China Sea.Chemical analysis of biodegradation was accomplished with GC-MS,screening out six strains that had strong de-emulsification and degradation activity.The six bacterial strains was identified using 16S rRNA sequencing.The experimental results show that after screening test using the gravimetric method,the biodegradation rates of six bacterial strains were determined between 20% and 55%.The six selected strains of bacteria were compared to genus-species in Genbank through contrast of the BLAST.Three strains belonged to Bacillus,one strain to Pseudoalteromonas,and one strain to Alteromonas.The six strains showed high degradation rates,up to 40% with alkanes and 70% with polycyclic aromatic hydrocarbon(PAHs).The bacterial strain B08 500 m-3 had the highest rates with 75% reduction of alkanes and 87% degradation of PAHs.%以南海10个采样点采集到的样品为研究材料,以石油降解率为筛选依据,初筛获得52株石油降解菌,从中进一步筛选出6株对石油烃有降解能力的细菌,通过16S rRNA序列分析对筛选得到的6株菌进行初步鉴定,并使用GC-MS内标法测定降解产物,对降解菌的降解特性进行进一步研究.结果表明,采用重量法筛选出来的6株细菌对石油的降解率为20%~55%.与Genbank中的16S rRNA基因序列BLAST对比结果显示,所筛选出的6株菌株中,3株菌株属于芽孢杆菌属(Bacillus),2株菌株属于假交替单胞菌属(Pseudoalteromonas),1株属于交替单胞菌属(Alteromonas).降解特性分析表明,所筛选6株菌的烷烃降解率均在40%以上,多环芳烃降解率均在70%以上,其中,菌株B08500m-3对石油中总烷烃和总芳香烃的降解效果较好,降解率分别为75%和87%.

  4. Draft Genome Sequence of the Cyanobacterium Aphanizomenon flos-aquae Strain 2012/KM1/D3, Isolated from the Curonian Lagoon (Baltic Sea).

    Science.gov (United States)

    Šulčius, Sigitas; Alzbutas, Gediminas; Kvederavičiūtė, Kotryna; Koreivienė, Judita; Zakrys, Linas; Lubys, Arvydas; Paškauskas, Ričardas

    2015-01-15

    We report here the de novo genome assembly of a cyanobacterium, Aphanizomenon flos-aquae strain 2012/KM1/D3, a harmful bloom-forming species in temperate aquatic ecosystems. The genome is 5.7 Mb with a G+C content of 38.2%, and it is enriched mostly with genes involved in amino acid and carbohydrate metabolism. Copyright © 2015 Šulčius et al.

  5. Isolation of TDA-producing Phaeobacter strains from sea bass larval rearing units and their probiotic effect against pathogenic Vibrio spp. in Artemia cultures.

    Science.gov (United States)

    Grotkjær, Torben; Bentzon-Tilia, Mikkel; D'Alvise, Paul; Dourala, Nancy; Nielsen, Kristian Fog; Gram, Lone

    2016-05-01

    Fish-pathogenic Vibrio can cause large-scale crashes in marine larval rearing units and, since the use of antibiotics can result in bacterial antibiotic resistance, new strategies for disease prevention are needed. Roseobacter-clade bacteria from turbot larval rearing facilities can antagonize Vibrio anguillarum and reduce mortality in V. anguillarum-infected cod and turbot larvae. In this study, it was demonstrated that antagonistic Roseobacter-clade bacteria could be isolated from sea bass larval rearing units. In addition, it was shown that they not only antagonized V. anguillarum but also V. harveyi, which is the major bacterial pathogen in crustaceans and Mediterranean sea bass larvae cultures. Concomitantly, they significantly improved survival of V. harveyi-infected brine shrimp. 16S rRNA gene sequence homology identified the antagonists as Phaeobacter sp., and in silico DNA-DNA hybridization indicated that they could belong to a new species. The genomes contained genes involved in synthesis of the antibacterial compound tropodithietic acid (TDA), and its production was confirmed by UHPLC-TOFMS. The new Phaeobacter colonized live feed (Artemia) cultures and reduced Vibrio counts significantly, since they reached only 10(4)CFUmL(-1), as opposed to 10(8)CFUmL(-1) in non-Phaeobacter treated controls. Survival of V. anguillarum-challenged Artemia nauplii was enhanced by the presence of wild type Phaeobacter compared to challenged control cultures (89±1.0% vs 8±3.2%). In conclusion, TDA-producing Phaeobacter isolated from Mediterranean marine larviculture are promising probiotic bacteria against pathogenic Vibrio in crustacean live-feed cultures for marine fish larvae.

  6. Isolation and characterization of marine Brevibacillus sp. S-1 collected from South China Sea and a novel antitumor peptide produced by the strain.

    Directory of Open Access Journals (Sweden)

    Lanhong Zheng

    Full Text Available A Gram-positive, rod-shaped bacterium, designated as S-1, was isolated from a marine sediment sample collected from South China Sea. Phylogenetic analysis based on 16S rRNA gene sequence showed that S-1 belongs to the genus Brevibacillus. A novel cytotoxic peptide was isolated from the fermentation broth of the marine-derived bacterium Brevibacillus sp. S-1, using ion-exchange chromatography and reverse-phase HPLC chromatography. The molecular weight of this peptide was determined as 1570 Da by MALDI-TOF mass spectrometry, and its structure was proposed as a cyclic peptide elucidated by MALDI-TOF/TOF mass spectrometry and de novo sequencing. 3-(4,5-dimethyl-2-thiazolyl-2,5-diphenyl-2H-tetrazolium bromide (MTT assay showed that this peptide exhibited cytotoxicity against BEL-7402 human hepatocellular carcinoma cells, RKO human colon carcinoma cells, A549 human lung carcinoma cells, U251 human glioma cells and MCF-7 human breast carcinoma cells. Additionally, SBP exhibited low cytotoxicity against HFL1 human normal fibroblast lung cells. The result suggested that the cytotoxic effect of the peptide is specific to tumor cells.

  7. Antibiotic-resistant Escherichia coli bacteria, including strains with genes encoding the extended-spectrum beta-lactamase and QnrS, in waterbirds on the Baltic Sea Coast of Poland.

    Science.gov (United States)

    Literak, Ivan; Dolejska, Monika; Janoszowska, Dagmar; Hrusakova, Jolana; Meissner, Wlodzimierz; Rzyska, Hanna; Bzoma, Szymon; Cizek, Alois

    2010-12-01

    Individual cloacal swabs of mallards (Anas platyrhynchos) and of herring gulls (Larus argentatus), as well as samples of waterbird feces obtained in 2008 and 2009, were cultivated for Escherichia coli. Isolates of E. coli were tested for susceptibilities to 12 antimicrobial agents by the disk diffusion method. Moreover, the samples were subcultivated on MacConkey agar (MCA) containing cefotaxime (2 mg liter(-1)) to detect E. coli with extended-spectrum beta-lactamase (ESBL) and subsequently on MCA supplemented with ciprofloxacin (0.05 mg liter(-1)) and MCA with nalidixic acid (20 mg liter(-1)) to isolate fluoroquinolone-resistant E. coli. PCR was used to detect specific antibiotic resistance genes. We found 9 E. coli isolates producing ESBL with bla genes: bla(CTX-M-1) (6 isolates), bla(CTX-M-9) plus bla(TEM-1b) (1 isolate), bla(CTX-M-15) plus bla(OXA-1) (1 isolate), and bla(SHV-12) (1 isolate). In the isolate with bla(CTX-M-15), the gene aac(6)-Ib-cr was also detected. The bla genes were harbored by transferable plasmids of the IncN and IncI1 groups. Nine quinolone-resistant E. coli isolates with qnrS genes were found and characterized. The gene qnrS was associated with a Tn3-like transposon on the IncX1 plasmid together with bla(TEM-1) in two isolates. The gene qnrS was also harbored by conjugative plasmids of the IncN and IncX2 groups. Even if populations of wild birds are not directly influenced by antibiotic practice, we have demonstrated that antibiotic-resistant E. coli strains, including strains with various ESBL and qnrS genes, are found in the feces of wild birds on the coast of the Baltic Sea in Poland.

  8. Structural Confirmation of a Unique Carotenoid Lactoside, P457, in Symbiodinium sp. Strain nbrc 104787 Isolated from a Sea Anemone and its Distribution in Dinoflagellates and Various Marine Organisms.

    Science.gov (United States)

    Wakahama, Takahiro; Laza-Martínez, Aitor; Bin Haji Mohd Taha, Ahmad Iskandar; Okuyama, Hidetoshi; Yoshida, Kiyohito; Kogame, Kazuhiro; Awai, Koichiro; Kawachi, Masanobu; Maoka, Takashi; Takaichi, Shinichi

    2012-12-01

    The molecular structure of the carotenoid lactoside P457, (3S,5R,6R,3'S,5'R,6'S)-13'-cis-5,6-epoxy-3',5'-dihydroxy-3-(β-d-galactosyl-(1→4)-β-d-glucosyl)oxy-6',7'-didehydro-5,6,7,8,5',6'-hexahydro-β,β-caroten-20-al, was confirmed by spectroscopic methods using Symbiodinium sp. strain NBRC 104787 cells isolated from a sea anemone. Among various algae, cyanobacteria, land plants, and marine invertebrates, the distribution of this unique diglycosyl carotenoid was restricted to free-living peridinin-containing dinoflagellates and marine invertebrates that harbor peridinin-containing zooxanthellae. Neoxanthin appeared to be a common precursor for biosynthesis of peridinin and P457, although neoxanthin was not found in peridinin-containing dinoflagellates. Fucoxanthin-containing dinoflagellates did not possess peridinin or P457; green dinoflagellates, which contain chlorophyll a and b, did not contain peridinin, fucoxanthin, or P457; and no unicellular algae containing both peridinin and P457, other than peridinin-containing dinoflagellates, have been observed. Therefore, the biosynthetic pathways for peridinin and P457 may have been coestablished during the evolution of dinoflagellates after the host heterotrophic eukaryotic microorganism formed a symbiotic association with red alga that does not contain peridinin or P457.

  9. New production in the South China Sea

    Institute of Scientific and Technical Information of China (English)

    CAI; Pinghe

    2002-01-01

    [1]Dugdale, R. C., Goering, J. J., Uptake of new and regenerated nitrogen in primary productivity, Limnology and Oceanog-raphy, 1967, 12: 196-206.[2]Eppley, R. W., Peterson, B. J., Particulate organic matter flux and planktonic new production in the deep ocean, Nature, 1979, 282: 677-680.[3]Allen, C. B., Kanda, J., Laws, E. A., New production and photosynthetic rates within and outside a cyclonic mesoscale eddy in the North Pacific Subtropical gyre, Deep-Sea Research Ⅱ, 1996, 43(6): 917-936.[4]Jenkins, W. J., Tritium-helium dating in the Sargasso Sea: A measurement of oxygen utilization rates, Nature, 1977, 196: 291-292.[5]Spitzer, W. S., Jenkins, W. J., Rates of vertical mixing, gas exchange and new production: Estimates from seasonal gas cy-cle in the upper ocean near Bermuda, Journal of Marine Research, 1989, 47: 169-196.[6]Sarmiento, J. L., Thiele, G., Key, R. M. et al., Oxygen and nitrate new production and remineralization in the North At-lantic Subtropical Gyre, Journal of Geophysical Research, 1990, 95: 18303-18315.[7]Ku, T. L., Luo, S., Kusakabe, M. et al., 228Ra-derived nutrient budgets in upper equatorial Pacific and the role of "new" silicate in limiting productivity, Deep-Sea Research II, 1995, 42(2/3): 479-497.[8]Wheeler, P. A., Rates of nitrate assimilation at the equator during the US-JGOFS spring time series: Estimates of new pro-duction, EOS, Transactions, American Geophysical Union, 1992, 73: 281.[9]Huang, Y., Xie, Y., Chen, M. et al., Distribution feature of 228Ra in surface seawater of the Nansha sea area, in Isotopes Marine Chemistry of Nansha Islands Waters (in Chinese), Beijing: Ocean Press, 1996, 70-78.[10]Reid, D. F., Key, R. M., Schink, D., Radium, thorium and actinium extraction from seawater using an improved manga-nese-oxide-coated fiber, Earth and Planetary Science Letters, 1979, 43: 223-226.[11]Shi, W., Qiu, X., Huang, Y., Distribution of dissolved 226Ra in the Jiulongjiang-Xiamen bay

  10. Sea Legs

    Science.gov (United States)

    Macdonald, Kenneth C.

    Forty-foot, storm-swept seas, Spitzbergen polar bears roaming vast expanses of Arctic ice, furtive exchanges of forbidden manuscripts in Cold War Moscow, the New York city fashion scene, diving in mini-subs to the sea floor hot srings, life with the astronauts, romance and heartbreak, and invading the last bastions of male exclusivity: all are present in this fast-moving, non-fiction account of one woman' fascinating adventures in the world of marine geology and oceanography.

  11. Chemical Contaminants Found in the Gastrointestinal Tract of Loggerhead Sea Turtles (Caretta caretta)

    Science.gov (United States)

    Athey, S. N.; Seaton, P. J.; Mead, R. N.

    2016-02-01

    Plastic is becoming increasingly more abundant in the marine environment. Plastic ingestion has been shown to be a source of exposure to a variety of harmful compounds, such as polycyclic aromatic hydrocarbons (PAHs), bisphenol A (BPA), and phthalates, which are known for their negative physiological effects on the endocrine system as well as their ability to adsorb and leach from plastic into the bodies of marine organisms. The physiological effects of these compounds on loggerhead sea turtles (Caretta caretta) still remain unknown. This study investigated the presence of toxicants on marine plastic samples collected from Bermuda, the Sargasso Sea, and the North Atlantic Ocean. Gas chromatography/triple quadruple mass spectrometry (GC/MS) analysis showed PAHs were present on many plastic debris samples. Plastic additives such as phthalates and (BPA) were also found. ΣPAH concentrations for anthracene, chrysene, benzo[b]fluoranthene, and benzo[k]fluoranthene for 2013 environmental plastic samples averaged 26.7ng/g of plastic. This study also examined the presence of these compounds in fluids from the stomach, small intestine, and large intestine from two adult loggerhead turtles. GC/MS analysis also showed the presence of BPA and phthalates on plastic samples, as well as in two out of the six gastrointestinal fluids samples. Average ΣPAH concentration for GI fluids for the loggerheads in the study was 58.7 ng/mL. This study showed plastic could be a significant source of PAHs in sea turtles and the first to detect PAHs in sea turtle GI fluid. Loggerhead sea turtles are a long living species and could accumulate high concentrations of these endocrine-disrupting chemicals throughout their lifetime.

  12. Sea Ice

    Science.gov (United States)

    Perovich, D.; Gerland, S.; Hendricks, S.; Meier, Walter N.; Nicolaus, M.; Richter-Menge, J.; Tschudi, M.

    2013-01-01

    During 2013, Arctic sea ice extent remained well below normal, but the September 2013 minimum extent was substantially higher than the record-breaking minimum in 2012. Nonetheless, the minimum was still much lower than normal and the long-term trend Arctic September extent is -13.7 per decade relative to the 1981-2010 average. The less extreme conditions this year compared to 2012 were due to cooler temperatures and wind patterns that favored retention of ice through the summer. Sea ice thickness and volume remained near record-low levels, though indications are of slightly thicker ice compared to the record low of 2012.

  13. Sea level change

    Digital Repository Service at National Institute of Oceanography (India)

    Church, J.A.; Clark, P.U.; Cazenave, A.; Gregory, J.M.; Jevrejeva, S.; Levermann, A.; Merrifield, M.A.; Milne, G.A.; Nerem, R.S.; Nunn, P.D.; Payne, A.J.; Pfeffer, W.T.; Stammer, D.; Unnikrishnan, A.S.

    This chapter considers changes in global mean sea level, regional sea level, sea level extremes, and waves. Confidence in projections of global mean sea level rise has increased since the Fourth Assessment Report (AR4) because of the improved...

  14. Assessment of high and low enterotoxin A producing Staphylococcus aureus strains on pork sausage.

    Science.gov (United States)

    Zeaki, Nikoleta; Cao, Rong; Skandamis, Panagiotis N; Rådström, Peter; Schelin, Jenny

    2014-07-16

    Three Staphylococcus aureus strains representing different alleles of the Siphoviridae prophage-encoded enterotoxin A (SEA) gene, including two high-SEA-producing strains and one low-SEA-producing strain were studied to investigate sea expression and SEA formation on a frankfurter type of sausage. The effect of lactic acid, an antimicrobial compound used as a preservative in food, was also investigated on the same product. All three strains were grown on pork sausages at 15°C for 14days in the presence or absence of lactic acid (1 or 2% v/v). Growth, sea mRNA expression and SEA formation were regularly monitored and compared between non-treated and treated sausages. For all experiments performed, the extracellular SEA formation significantly differed between the high- and low-SEA-producing strains, although growth and viability were overall the same. For the low producer (Sa51), the accumulated amount of extracellular SEA formed after 14days was close to the detection limit (less than 1ng/g) in all conditions; while Sa21 and Sa17, the two high-producing strains, formed 250±25.37ng/g and 750±82.65ng/g in non-treated sausage and 150±75.75ng/g and 300±83.89ng/g when treated with 1% lactic acid, respectively, after 14days. Sausages treated with 2% lactic acid followed the same pattern as above, but with an extended lag phase to 4days and reduced levels of enterotoxin formed for all strains. The difference in the level of SEA between the two high-producing strains is most likely due to the different clonal lineages of the sea-encoded Siphoviridae phages where induction of the prophage potentially could be the reason for higher production of SEA in one of the lines. Furthermore, a prolonged expression of sea gene in the two high-producing strains was observed during the entire incubation period, while the sea expression was under the detection limit in the low-producing strain. This study indicates that the high-SEA-producing strains, especially the strains with the

  15. Survival of filamentous fungi in hypersaline Dead Sea water.

    Science.gov (United States)

    Kis-Papo, T; Oren, A; Wasser, S P; Nevo, E

    2003-02-01

    A variety of filamentous fungi have recently been isolated from the Dead Sea (340 g/L total dissolved salts). To assess the extent to which such fungi can survive for prolonged periods in Dead Sea water, we examined the survival of both spores and mycelia in undiluted Dead Sea water and in Dead Sea water diluted to different degrees with distilled water. Mycelia of Aspergillus versicolor and Chaetomium globosum strains isolated from the Dead Sea remained viable for up to 8 weeks in undiluted Dead Sea water. Four Dead Sea isolates (A. versicolor, Eurotium herbariorum, Gymnascella marismortui, and C. globosum) retained their viability in Dead Sea water diluted to 80% during the 12 weeks of the experiment. Mycelia of all species survived for the full term of the experiment in Dead Sea water diluted to 50% and 10% of its original salinity. Comparison of the survival of Dead Sea species and closely related isolates obtained from other locations showed prolonged viability of the strains obtained from the Dead Sea. Spores of isolates obtained from the terrestrial shore of the Dead Sea generally proved less tolerant to suspension in undiluted Dead Sea water than spores of species isolated from the water column. Spores of the species isolated from the control sites had lost their viability in undiluted Dead Sea water within 12 weeks. However, with the exception of Emericella spores, which showed poor survival, a substantial fraction of the spores of Dead Sea fungal isolates remained viable for that period. The difference in survival rate between spores and mycelia of isolates of the same species points to the existence of adapted halotolerant and/or halophilic fungi in the Dead Sea.

  16. Genome sequence of Kosmotoga olearia strain TBF 19.5.1, a thermophilic bacterium with a wide growth temperature range, isolated from the Troll B oil platform in the North Sea.

    Science.gov (United States)

    Swithers, Kristen S; DiPippo, Jonathan L; Bruce, David C; Detter, Christopher; Tapia, Roxanne; Han, Shunsheng; Goodwin, Lynne A; Han, James; Woyke, Tanja; Pitluck, Sam; Pennacchio, Len; Nolan, Matthew; Mikhailova, Natalia; Land, Miriam L; Nesbø, Camilla L; Gogarten, J Peter; Noll, Kenneth M

    2011-10-01

    Kosmotoga olearia strain TBF 19.5.1 is a member of the Thermotogales that grows best at 65°C and very well even at 37°C. Information about this organism is important for understanding the evolution of mesophiles from thermophiles. Its genome sequence reveals extensive gene gains and a large content of mobile genetic elements. It also contains putative hydrogenase genes that have no homologs in the other member of the Thermotogales.

  17. Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea

    Energy Technology Data Exchange (ETDEWEB)

    Swithers, Kristen S [University of Connecticut, Storrs; DiPippo, Jonathan L [University of Connecticut, Storrs; Bruce, David [Los Alamos National Laboratory (LANL); Detter, J. Chris [U.S. Department of Energy, Joint Genome Institute; Tapia, Roxanne [Los Alamos National Laboratory (LANL); Han, Cliff [Los Alamos National Laboratory (LANL); Goodwin, Lynne A. [Los Alamos National Laboratory (LANL); Han, James [U.S. Department of Energy, Joint Genome Institute; Woyke, Tanja [U.S. Department of Energy, Joint Genome Institute; Pitluck, Sam [U.S. Department of Energy, Joint Genome Institute; Pennacchio, Len [U.S. Department of Energy, Joint Genome Institute; Nolan, Matt [U.S. Department of Energy, Joint Genome Institute; Land, Miriam L [ORNL; Nesbo, Camilla [University of Oslo, Norway; Gogarten, Peter [University of Connecticut, Storrs; Noll, Kenneth M [University of Connecticut, Storrs

    2011-01-01

    Kosmotoga olearia strain TBF 19.5.1 is a member of the Thermotogales that grows best at 65 degrees C and very well even at 37 degrees C. Information about this organism is important for understanding the evolution of mesophiles from thermophiles. Its genome sequence reveals extensive gene gains and a large content of mobile genetic elements. It also contains putative hydrogenase genes that have no homologs in the other member of the Thermotogales.

  18. Hip flexor strain - aftercare

    Science.gov (United States)

    ... flexor - aftercare; Hip flexor injury - aftercare; Hip flexor tear - aftercare; Iliopsoas strain - aftercare; Strained iliopsoas muscle - aftercare; Torn iliopsoas muscle - aftercare; Psoas strain - aftercare

  19. Deep sequencing of the viral phoH gene reveals temporal variation, depth-specific composition, and persistent dominance of the same viral phoH genes in the Sargasso Sea

    Directory of Open Access Journals (Sweden)

    Dawn B. Goldsmith

    2015-06-01

    Full Text Available Deep sequencing of the viral phoH gene, a host-derived auxiliary metabolic gene, was used to track viral diversity throughout the water column at the Bermuda Atlantic Time-series Study (BATS site in the summer (September and winter (March of three years. Viral phoH sequences reveal differences in the viral communities throughout a depth profile and between seasons in the same year. Variation was also detected between the same seasons in subsequent years, though these differences were not as great as the summer/winter distinctions. Over 3,600 phoH operational taxonomic units (OTUs; 97% sequence identity were identified. Despite high richness, most phoH sequences belong to a few large, common OTUs whereas the majority of the OTUs are small and rare. While many OTUs make sporadic appearances at just a few times or depths, a small number of OTUs dominate the community throughout the seasons, depths, and years.

  20. On Rochester’ s Inferiority Compensation in Wide Sargasso Sea%优越情结的悲剧--《藻海无边》中罗切斯特的自卑补偿

    Institute of Scientific and Technical Information of China (English)

    邱晓军; 叶雅观

    2013-01-01

    根据阿德勒的自卑理论,《藻海无边》中主人公安托瓦内特和罗切斯特的婚姻悲剧部分源于主人公罗切斯特未能对自卑感做出适度的补偿,对自卑过度补偿导致优越情结。剖析其对自卑感补偿不当最终酿成悲剧,从一个侧面更好地阐释人物的心理特征和个性,把握他们的婚姻悲剧。%According to the theory of Alfred Adler ’ s Inferiority Complex , the thesis holds that marriage tragedy of Antoinette and Rochester is partly due to Rochester ’ s improper compensation for inferiority feelings .It is Rochester ’ s overcompensation that leads to the result of superiority complex .Analysis of the tragedy of Rochester ’ s inappropriate compensation will help to have a bet-ter examination of the character ’ s psychology and personality and understanding of the marriage tragedy .

  1. Recovery of atypical Aeromonas salmonicida from ulcerated fish from the Baltic Sea

    DEFF Research Database (Denmark)

    Wiklund, T.; Tabolina, I; Bezgachina, T.V.

    1999-01-01

    Ulcerated fish of six different species were collected during the BMB/ICES Sea-going Workshop "Fish Diseases and Parasites in the Baltic Sea", 25 November to 8 December 1994, and examined for bacteriological infections. Atypical Aeromonas salmonicida strains were isolated from the majority of the......, well-defined biotype of A. salmonicida. (C) 1999 International Council for the Exploration of the Sea....

  2. Mammals of the Sea.

    Science.gov (United States)

    Naturescope, 1986

    1986-01-01

    Presents information on sea mammals, including definitions and characteristics of cetaceans, pinnipeds, and sirenians. Contains descriptions of the teaching activities "Whale Music,""Draw A Whale to Scale,""Adopt a Sea Mammal," and "Sea Mammal Sleuths." (TW)

  3. Mammals of the Sea.

    Science.gov (United States)

    Naturescope, 1986

    1986-01-01

    Presents information on sea mammals, including definitions and characteristics of cetaceans, pinnipeds, and sirenians. Contains descriptions of the teaching activities "Whale Music,""Draw A Whale to Scale,""Adopt a Sea Mammal," and "Sea Mammal Sleuths." (TW)

  4. Simulating transoceanic migrations of young loggerhead sea turtles: merging magnetic navigation behavior with an ocean circulation model.

    Science.gov (United States)

    Putman, Nathan F; Verley, Philippe; Shay, Thomas J; Lohmann, Kenneth J

    2012-06-01

    Young loggerhead sea turtles (Caretta caretta) from eastern Florida, USA, undertake a transoceanic migration in which they gradually circle the Sargasso Sea before returning to the North American coast. Loggerheads possess a 'magnetic map' in which regional magnetic fields elicit changes in swimming direction along the migratory pathway. In some geographic areas, however, ocean currents move more rapidly than young turtles can swim. Thus, the degree to which turtles can control their migratory movements has remained unclear. In this study, the movements of young turtles were simulated within a high-resolution ocean circulation model using several different behavioral scenarios, including one in which turtles drifted passively and others in which turtles swam briefly in accordance with experimentally derived data on magnetic navigation. Results revealed that small amounts of oriented swimming in response to regional magnetic fields profoundly affected migratory routes and endpoints. Turtles that engaged in directed swimming for as little as 1-3 h per day were 43-187% more likely than passive drifters to reach the Azores, a productive foraging area frequented by Florida loggerheads. They were also more likely to remain within warm-water currents favorable for growth and survival, avoid areas on the perimeter of the migratory route where predation risk and thermal conditions pose threats, and successfully return to the open-sea migratory route if carried into coastal areas. These findings imply that even weakly swimming marine animals may be able to exert strong effects on their migratory trajectories and open-sea distributions through simple navigation responses and minimal swimming.

  5. Ecological studies on Prochlorococcus in China seas

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Prochlorococcus, a tiny oxygenic photosynthetic picoplankton with unique pigment composition, has been found to be ubiquitous and abundant in the world oceans, and has been recognized to be closely related to living resources and environmental issues. It has attracted the interest of marine biologists since its discovery, and field data on it over global oceans have accumulated rapidly in the past 10 years. In China, we have studied Prochlorococcus for 8 years, achieving a basic ecological understanding. The presence of Prochlorococcus in China seas, marginal seas of the west Pacific, was confirmed, and its distribution patterns were also brought to light. Prochlorococcus is very abundant in the South China Sea and the offshore regions of the East China Sea. It is seasonally present in the southeast part of the Yellow Sea and absent in the Bohai Sea. Temporal and spatial variations of the abundance of Prochlorococcus and their affecting factors, physiological and ecological characteristics of Prochlorococcus and their relationships to the other groups of picoplankton, and the importance of Prochlorococcus in total biomass and possible roles in living resources and environmental problems are discussed. In the future, isolation of different Prochlorococcus strains from the China seas and their physiological characteristics, genetic diversity, phylogenies and gene exploiture, etc. are important issues to be addressed.

  6. Geobacteraceae strains and methods

    Science.gov (United States)

    Lovley, Derek R.; Nevin, Kelly P.; Yi, Hana

    2015-07-07

    Embodiments of the present invention provide a method of producing genetically modified strains of electricigenic microbes that are specifically adapted for the production of electrical current in microbial fuel cells, as well as strains produced by such methods and fuel cells using such strains. In preferred embodiments, the present invention provides genetically modified strains of Geobacter sulfurreducens and methods of using such strains.

  7. White sea radioactivity assessment

    Energy Technology Data Exchange (ETDEWEB)

    Aliev, R.A. [Lomonosov Moscow State Univ. (Russian Federation). Skobeltsyn Inst. of Nuclear Physics]|[Lomonosov Moscow State Univ. (Russian Federation). Chemistry Dept.]|[Russian Academy of Sciences, Moscow (Russian Federation). Shirshov Inst. of Oceanology; Kalmykov, S.N.; Lisitzin, A.P. [Lomonosov Moscow State Univ. (Russian Federation). Chemistry Dept.

    2004-07-01

    The aim of the present work is to estimate potential sources and chronology of pollution of the White Sea (Russia) by artificial radionuclides. White Sea is semi-closed water body connected with Barents Sea by a narrow strait. Thus, pollution of White Sea may be caused by highly polluted Barents waters and river (mainly Northern Dvina) run-off. This is the first detailed investigation of radioactivity of White Sea sediment records. (orig.)

  8. 深海低温脂肪酶基因工程菌LIP001发酵条件的优化%Fermentation Conditions Optimization of Deep Sea Gene Engineering Strain LIP001 Producing Cold-adaptive Lipase

    Institute of Scientific and Technical Information of China (English)

    产竹华; 刘洋; 苏玉斌; 单大鹏; 王水琦; 曾润颖

    2011-01-01

    对从深海沉积物宏基因组文库中获得的产低温脂肪酶基因工程菌LIP001进行了发酵条件优化.通过单因素试验对LIP001产脂肪酶的主要影响条件进行了探讨,确定了培养条件为30℃、pH7.0、接种量5%、装液量50ml.在单因素的基础上通过正交试验优化了影响重组菌uP00l产酶主要因素:橄榄油、酵母粉、磷酸盐、MgSO,确定了培养基为橄榄油1%、酵母粉0.5%、蛋白胨1%、硫酸铵0.5%、磷酸盐0.5%、MgSO为0.2%、氯霉素12.5 μg/ml,优化后的脂肪酶活为1980U/ml,比优化前提高了54.7%,为大规模发酵奠定了基础.采用5升发酵罐方法试验,酶活达到2420U/ml.%One clone ( LIPOO1) producing cold-active lipase was selected from metagenomic library of deep sea sediment for the optimization study of fermentation conditions. The effects of main factors on the growth and lipase-producing of LIPOO1 were determined by single-factor test. The results showed that the optimal condition were 30℃ , pH7.0, and inoculum size 5% , liquid volume 50ml in 250ml flask, respectively. The fermentation conditions for the lipase-producing of LIPOO1 were further optimized by orthogonal experiment on the basis of single factor test. The major factors and their concentrations were as follows: olive oil (1% ) , yeast extract (0. 5% ) , peptone (1% ) , ( NH4 )2SO4 (0. 5% ) , phosphate (0. 5% ) , MgSO4 (0. 2% ) . and chloromycetin (12.5μg/ml) , respectively. Under the optimized condition, the lipase activity was 1980U/ml which was increased by 54. 7% . For 5L fermentor research , the lipase activity was 2420U/ml.

  9. 3株深海细菌的生理及分子生物学鉴定%Identification of 3 strains of deep-sea bacteria by physiologi-cal and molecular biological methods

    Institute of Scientific and Technical Information of China (English)

    侯兆君; 张明; 蒋富清; 张宝玉

    2013-01-01

      从西菲律宾海底4954 m深的沉积物中分离到一批深海细菌,对其中编号为B2、B5、B6的3株细菌进行了生理、光学显微镜和扫描电镜观察,并且进行了分子水平鉴定。菌落呈圆球形,光滑,3株菌均带有颜色, B6菌呈乳白色, B2和 B5菌分别呈现鲜艳的橙色和红色。扫描电镜观察表明 B2和B6呈杆状,但B6菌外面覆有鞘膜, B5菌呈球状。生理实验表明,3株菌温度生长范围在37℃以下,最适生长温度分别为20、28、28℃,属于耐冷菌范畴。pH耐受范围为6~14,最适pH分别为8、8、12。3株细菌16S rRNA基因序列同源性分析表明,它们分属于芽孢杆菌(Bacillus)、节杆菌(Arthrobacter)、蛋白菌(Acinetobacter)3个不同的菌属。%  The investigated samples were collected from old, sediment-covered lava flows in the rift valley at a water depth around 4 954 m. Three strains of bacteria were purified and denoted as B2, B5 and B6. They were characterized with physiological, microscope, scanning electron microscope (SEM) and molecular methods. The bacteria were round, smooth and with different color. B6 showed ivory yellow, while B2 and B5 showed vivid or-ange and red, respectively. SEM results showed that B2 and B6 is rod shape, but B6 is coved with tunica vaginalis. B5 is globular. The growth temperature of these three strains is below 37 ℃, the optimum growth temperature for B2, B5 and B6 was 20, 28 and 28℃, respectively, The pH tolerance range was 6~14, and the optimum pH was 8, 8 and 12, respectively. 16S rRNA sequence analysis showed that they belong to 3 different genus, and they are Bacil-lus (Bacillus), Arthrobacter (Arthrobacter) and protein in bacteria (Acinetobacter), respectively.

  10. Sprains and Strains

    Science.gov (United States)

    ... wrestling put people at risk for strains. Gymnastics, tennis, rowing, golf, and other sports that require extensive gripping can increase the risk of hand and forearm strains. Elbow strains sometimes occur in people who participate in ...

  11. Muscle strain treatment

    Science.gov (United States)

    Treatment - muscle strain ... Question: How do you treat a muscle strain ? Answer: Rest the strained muscle and apply ice for the first few days after the injury. Anti-inflammatory medicines or acetaminophen ( ...

  12. Muscle strain (image)

    Science.gov (United States)

    A muscle strain is the stretching or tearing of muscle fibers. A muscle strain can be caused by sports, exercise, a ... something that is too heavy. Symptoms of a muscle strain include pain, tightness, swelling, tenderness, and the ...

  13. Local adaptation and oceanographic connectivity patterns explain genetic differentiation of a marine diatom across the North Sea-Baltic Sea salinity gradient.

    Science.gov (United States)

    Sjöqvist, C; Godhe, A; Jonsson, P R; Sundqvist, L; Kremp, A

    2015-06-01

    Drivers of population genetic structure are still poorly understood in marine micro-organisms. We exploited the North Sea-Baltic Sea transition for investigating the seascape genetics of a marine diatom, Skeletonema marinoi. Eight polymorphic microsatellite loci were analysed in 354 individuals from ten locations to analyse population structure of the species along a 1500-km-long salinity gradient ranging from 3 to 30 psu. To test for salinity adaptation, salinity reaction norms were determined for sets of strains originating from three different salinity regimes of the gradient. Modelled oceanographic connectivity was compared to directional relative migration by correlation analyses to examine oceanographic drivers. Population genetic analyses showed distinct genetic divergence of a low-salinity Baltic Sea population and a high-salinity North Sea population, coinciding with the most evident physical dispersal barrier in the area, the Danish Straits. Baltic Sea populations displayed reduced genetic diversity compared to North Sea populations. Growth optima of low salinity isolates were significantly lower than those of strains from higher native salinities, indicating local salinity adaptation. Although the North Sea-Baltic Sea transition was identified as a barrier to gene flow, migration between Baltic Sea and North Sea populations occurred. However, the presence of differentiated neutral markers on each side of the transition zone suggests that migrants are maladapted. It is concluded that local salinity adaptation, supported by oceanographic connectivity patterns creating an asymmetric migration pattern between the Baltic Sea and the North Sea, determines genetic differentiation patterns in the transition zone.

  14. Sea Education Association's sailing research vessels as innovative platforms for long-term research and education

    Science.gov (United States)

    Joyce, P.; Carruthers, E. A.; Engels, M.; Goodwin, D.; Lavender Law, K. L.; Lea, C.; Schell, J.; Siuda, A.; Witting, J.; Zettler, E.

    2012-12-01

    Sea Education Association's (SEA) two research vessels, the SSV Corwith Cramer and the SSV Robert C. Seamans are unique in the research world. Not only do these ships perform advanced research using state of the art equipment, they do so under sail with high school, undergraduate, and graduate students serving as both the science team and the crew. Because of SEA's educational mission and reliance on prevailing winds for sailing, the vessels have been studying repeated tracks for decades, providing valuable long-term data sets while educating future marine scientists. The Corwith Cramer has been collecting data in the North Atlantic between New England, the Sargasso Sea, Bermuda, and the Caribbean since 1987 while the Robert C. Seamans has been operating in the Eastern Pacific between the US West Coast, Hawaii, and French Polynesia since 2001. The ships collect continuous electronic data from hull mounted ADCP, chirp, and a clean flowing seawater system logging temperature, salinity, in-vivo chlorophyll and CDOM fluorescence, and beam attenuation. The ships also periodically collect data from profiling CTDs with chlorophyll and CDOM fluorometers, transmissometers, and dissolved oxygen and PAR sensors. In addition to electronic data, archived long term data sets include physical samples from net tows such as marine plastic debris and tar, and plankton including Halobates (a marine insect), leptocephali (eel larvae), and phyllosoma (spiny lobster larvae). Both vessels are 134' brigantine rig tall ships and are designated sailing school vessels (SSV) by the US Coast Guard, and both have received instrumentation grants from NSF to provide high quality, reliable data that is submitted to the NSF R2R archives. Students sailing on these ships spend time on shore at the SEA campus in Woods Hole, MA taking classes in oceanography, nautical science, maritime studies and public policy. Each student is required to write a proposal for their research before heading to sea, and

  15. 7 CFR 1437.310 - Sea grass and sea oats.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 10 2010-01-01 2010-01-01 false Sea grass and sea oats. 1437.310 Section 1437.310 Agriculture Regulations of the Department of Agriculture (Continued) COMMODITY CREDIT CORPORATION, DEPARTMENT... Determining Coverage Using Value § 1437.310 Sea grass and sea oats. (a) Sea grass and sea oats are value...

  16. Sea Turtle Interaction Report

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Sea Turtle Interaction Report is a report sent out in pdf format to authorized individuals that summarizes sea turtle interactions in the longline fishery. The...

  17. Sea Turtle Interaction Report

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Sea Turtle Interaction Report is a report sent out in pdf format to authorized individuals that summarizes sea turtle interactions in the longline fishery. The...

  18. Sea Lion Diet Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — California sea lions pup and breed at four of the nine Channel Islands in southern California. Since 1981, SWFSC MMTD has been conducting a diet study of sea lions...

  19. All That Unplowed Sea

    Science.gov (United States)

    MOSAIC, 1975

    1975-01-01

    Hunting and gathering at sea may fast be approaching their productive limits. Aquaculture - farming at sea - linked to conservation represents the sea's promise. If the system works, it might prove to be the key to supplying large amounts of food and fresh water at no cost in nonrenewable energy resources. (BT)

  20. The Caspian Sea Environment

    Science.gov (United States)

    Kostianoy, Andrey; Kosarev, A.

    The systematic description of the knowledge accumulated on the physical oceanography, marine chemistry and pollution, and marine biology of the Caspian Sea forms the basis of this book. It presents the principal characteristic features of the environmental conditions of the sea and their changes in the second half of the 20th century. At present, the principal problems of the Caspian Sea are related to the interannual sea level changes and their forecast and to the estimation of the intensity of the chemical pollution of the sea and its impact upon the biota.

  1. SEA and planning

    DEFF Research Database (Denmark)

    Stoeglehner, G.; Brown, A.L.; Kørnøv, Lone

    2009-01-01

    As the field of strategic environmental assessment (SEA) has matured, the focus has moved from the development of legislation, guidelines and methodologies towards improving the effectiveness of SEA. Measuring and of course achieving effectiveness is both complex and challenging. This paper...... suggests that SEA professionals need to consider 'democratic effectiveness' as well as 'environmental effectiveness' in both 'direct' and 'indirect' outputs. The effectiveness of SEA depends critically on the context within which SEA legislation and guidelines are understood and implemented......, and the relationship of the SEA to the planning activity itself. This paper focuses on the influence that planners have in these implementation processes, postulating the hypothesis that these are key players in achieving effectiveness in SEA. Based upon implementation theory and empirical experience, the paper...

  2. Baltic Sea: Radionuclides

    DEFF Research Database (Denmark)

    Nielsen, Sven Poul; Lüning, Maria; Ilus, Erkki

    2011-01-01

    about 14%. For 90Sr in the Baltic Sea, input from atmospheric fallout from nuclear weapons tests has contributed about 81%, while the contribution from Chernobyl fallout was about 13%. Cesium-137 is the main indicator of Baltic seawater with respect to anthropogenic radioactivity. The highest....... Radioactivity inputs into the Baltic Sea from nuclear reprocessing plants in Western Europe have become of minor importance due to significant reduction of discharges in recent years. In terms of input of 137Cs into the Baltic Sea, Chernobyl fallout has contributed about 82% and nuclear weapons test fallout...... 137Cs values due to their higher concentration factors (CFs). The larger 137Cs values of pike were observed at the coast of the Bothnian Sea. The Baltic Sea is the regional sea in the world with the highest concentrations of 137Cs. The Baltic Sea ranks third in the world with respect to 90Sr...

  3. Baltic Sea: Radionuclides

    DEFF Research Database (Denmark)

    Nielsen, Sven Poul; Lüning, Maria; Ilus, Erkki

    2010-01-01

    about 14%. For 90Sr in the Baltic Sea, input from atmospheric fallout from nuclear weapons tests has contributed about 81%, while the contribution from Chernobyl fallout was about 13%. Cesium-137 is the main indicator of Baltic seawater with respect to anthropogenic radioactivity. The highest....... Radioactivity inputs into the Baltic Sea from nuclear reprocessing plants in Western Europe have become of minor importance due to significant reduction of discharges in recent years. In terms of input of 137Cs into the Baltic Sea, Chernobyl fallout has contributed about 82% and nuclear weapons test fallout...... 137Cs values due to their higher concentration factors (CFs). The larger 137Cs values of pike were observed at the coast of the Bothnian Sea. The Baltic Sea is the regional sea in the world with the highest concentrations of 137Cs. The Baltic Sea ranks third in the world with respect to 90Sr...

  4. Sea piracy and law of the sea

    OpenAIRE

    Hanif, Muhammad Tahir

    2010-01-01

    As the sea become world’s largest source to trade between the nations during the last few decades. Of course there are lots of problems in this regards when we are using the sea on such a large scale. The problem of piracy is most dangerous problems, among the all problems of the sea at the same time. Nations are trying to control this crime individually and collectively but the problem is still on its peak. Lots of international and national laws and conventions are held in this ...

  5. Revealing Holobiont Structure and Function of Three Red Sea Deep-Sea Corals

    KAUST Repository

    Yum, Lauren

    2014-12-01

    Deep-sea corals have long been regarded as cold-water coral; however a reevaluation of their habitat limitations has been suggested after the discovery of deep-sea coral in the Red Sea where temperatures exceed 20˚C. To gain further insight into the biology of deep-sea corals at these temperatures, the work in this PhD employed a holotranscriptomic approach, looking at coral animal host and bacterial symbiont gene expression in Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus sp. sampled from the deep Red Sea. Bacterial community composition was analyzed via amplicon-based 16S surveys and cultured bacterial strains were subjected to bioprospecting in order to gauge the pharmaceutical potential of coralassociated microbes. Coral host transcriptome data suggest that coral can employ mitochondrial hypometabolism, anaerobic glycolysis, and surface cilia to enhance mass transport rates to manage the low oxygen and highly oligotrophic Red Sea waters. In the microbial community associated with these corals, ribokinases and retron-type reverse transcriptases are abundantly expressed. In its first application to deep-sea coral associated microbial communities, 16S-based next-generation sequencing found that a single operational taxonomic unit can comprise the majority of sequence reads and that a large number of low abundance populations are present, which cannot be visualized with first generation sequencing. Bioactivity testing of selected bacterial isolates was surveyed over 100 cytological parameters with high content screening, covering several major organelles and key proteins involved in a variety of signaling cascades. Some of these cytological profiles were similar to those of several reference pharmacologically active compounds, which suggest that the bacteria isolates produce compounds with similar mechanisms of action as the reference compounds. The sum of this work offers several mechanisms by which Red Sea deep-sea corals cope with environmental

  6. Salish Sea Genetics - Salish Sea genetic inventory

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Salish Sea comprises most of the Puget Sound water area. Marine species are generally assemblages of discrete populations occupying various ecological niches....

  7. Draft Genome Sequence of Halomonas elongata Strain K4, an Endophytic Growth-Promoting Bacterium Enhancing Salinity Tolerance In Planta

    KAUST Repository

    Lafi, Feras Fawzi

    2016-11-04

    Halomonas elongata strain K4 is an endophytic bacterial strain that was isolated from roots of Cyperus conglomeratus collected at the Red Sea coast in Thuwal, Saudi Arabia. Here, we present a draft genome sequence of this strain, highlighting a number of pathways involved in plant growth promotion under salt stress.

  8. Draft Genome Sequence of Halomonas elongata Strain K4, an Endophytic Growth-Promoting Bacterium Enhancing Salinity Tolerance In Planta

    Science.gov (United States)

    Lafi, Feras F.; Ramirez-Prado, Juan S.; Alam, Intikhab; Bajic, Vladimir B.

    2016-01-01

    Halomonas elongata strain K4 is an endophytic bacterial strain that was isolated from roots of Cyperus conglomeratus collected at the Red Sea coast in Thuwal, Saudi Arabia. Here, we present a draft genome sequence of this strain, highlighting a number of pathways involved in plant growth promotion under salt stress. PMID:27811099

  9. Linking scales in sea ice mechanics

    Science.gov (United States)

    Weiss, Jérôme; Dansereau, Véronique

    2017-02-01

    Mechanics plays a key role in the evolution of the sea ice cover through its control on drift, on momentum and thermal energy exchanges between the polar oceans and the atmosphere along cracks and faults, and on ice thickness distribution through opening and ridging processes. At the local scale, a significant variability of the mechanical strength is associated with the microstructural heterogeneity of saline ice, however characterized by a small correlation length, below the ice thickness scale. Conversely, the sea ice mechanical fields (velocity, strain and stress) are characterized by long-ranged (more than 1000 km) and long-lasting (approx. few months) correlations. The associated space and time scaling laws are the signature of the brittle character of sea ice mechanics, with deformation resulting from a multi-scale accumulation of episodic fracturing and faulting events. To translate the short-range-correlated disorder on strength into long-range-correlated mechanical fields, several key ingredients are identified: long-ranged elastic interactions, slow driving conditions, a slow viscous-like relaxation of elastic stresses and a restoring/healing mechanism. These ingredients constrained the development of a new continuum mechanics modelling framework for the sea ice cover, called Maxwell-elasto-brittle. Idealized simulations without advection demonstrate that this rheological framework reproduces the main characteristics of sea ice mechanics, including anisotropy, spatial localization and intermittency, as well as the associated scaling laws. This article is part of the themed issue 'Microdynamics of ice'.

  10. Summer Arctic sea fog

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Synchronous or quasi-synchronous sea-land-air observations were conducted using advanced sea ice, atmospheric and marine instruments during China' s First Arctic Expedition. Based on the Precious data from the expedition, it was found that in the Arctic Ocean, most part of which is covered with ice or is mixed with ice, various kinds of sea fog formed such as advection fog, radiation fog and vapor fog. Each kind has its own characteristic and mechanics of creation. In the southern part of the Arctic Ocean, due to the sufficient warm and wet flow there, it is favorable for advection fog to form,which is dense and lasts a long time. On ice cap or vast floating ice, due to the strong radiation cooling effect, stable radiating fog is likely to form. In floating ice area there forms vapor fog with the appearance of masses of vapor from a boiling pot, which is different from short-lasting land fog. The study indicates that the reason why there are many kinds of sea fog form in the Arctic Ocean is because of the complicated cushion and the consequent sea-air interaction caused by the sea ice distribution and its unique physical characteristics. Sea fog is the atmospheric phenomenon of sea-air heat exchange. Especially, due to the high albedo of ice and snow surface, it is diffcult to absorb great amount of solar radiation during the polar days. Besides, ice is a poor conductor of heat; it blocks the sea-air heat exchange.The sea-air exchange is active in floating ice area where the ice is broken. The sea sends heat to the atmosphere in form of latent heat; vapor fog is a way of sea-air heat exchange influencing the climate and an indicator of the extent of the exchange. The study also indicates that the sea also transports heat to the atmosphere in form of sensible heat when vapor fog occurs.

  11. Obturator internus muscle strains

    Directory of Open Access Journals (Sweden)

    Caoimhe Byrne, MB BCh, BAO

    2017-03-01

    Full Text Available We report 2 cases of obturator internus muscle strains. The injuries occurred in young male athletes involved in kicking sports. Case 1 details an acute obturator internus muscle strain with associated adductor longus strain. Case 2 details an overuse injury of the bilateral obturator internus muscles. In each case, magnetic resonance imaging played a crucial role in accurate diagnosis.

  12. [Hydrolytic activity of microorganisms of the Dead Sea coastal ecosystems].

    Science.gov (United States)

    Varbanets', L D; Matseliukh, O V; Avdiiuk, K V; Hudzenko, O V; Nidialkova, N A; Romanovs'ka, V O; Tashirev, O B

    2014-01-01

    All strains tested are characterized by proteolytic (caseinolytic) activity, while elastase one was revealed only in two Gracilibacillus strains 6T2 and 7Tl. The activity was high enough (23.1 and 34.7 E/Ml, respectively). These values are at the level of bacterial producers which are described in literature: Bacillus mesentericus 316 M (6 E/Ml), Bacillus thuringiensis IMB B-7324 (50-55 E/Ml). The ability of two strains tested to synthesize enzyme, active against elastine, is important, so far as microbial enzyme may be perspective for using in medicine: elastases are able to dissociation of elastin fibres of connective tissues. These two strains display also fibrinolytic activity, however it was insignificant. Six of eight strains studied manifested alpha-amylase activity (0.01 - 1.173 E/Ml). It was shown that no strains, isolated from the Dead Sea costal ecosystems are able to manifest alpha-L-rhamnosidase activity.

  13. Photosynthetic activity in marine and brackish water strains of Fucus vesiculosus and Fucus radicans (Phaeophyceae) at different light qualities.

    Science.gov (United States)

    Svahn, Carina; Maria Gylle, A; Ekelund, Nils G A

    2012-01-01

    This study investigates the effects of different light qualities on the photosynthetic capacity of the brown algae Fucus vesiculosus, from the Norwegian Sea, and Fucus radicans and F. vesiculosus, from the Bothnian Sea. The electron transport rates (ETR) obtained for F. vesiculosus from the Norwegian Sea showed significantly higher levels of light saturation compared with both species of algae from the Bothnian Sea. The maximum of ETR values for the Norwegian Sea strain showed no significant changes due to varying light quality compared with the initial values. For F. vesiculosus, from the Bothnian Sea, treatment with blue light showed an effect after 1 week of 30 and 90 μmol photons m(-2) s(-1) (Pvesiculosus from the Norwegian Sea, the photosynthetic efficiency (α) was significantly higher regardless of light quality and irradiance compared with the initial values. Variation in light quality and irradiance had minor effects on the F(v):F(m) values of the three algal strains studied.

  14. Complete Genome Sequence of a Giant Sea Perch Iridovirus in Kaohsiung, Taiwan

    Science.gov (United States)

    Hong, Jiann-Ruey

    2016-01-01

    We report here the complete genome sequence of a megalocytivirus strain, GSIV-K1, isolated from a farmed giant sea perch (Lates calcarifer) in Kaohsiung, Taiwan. GSIV-K1 causes mortality in farmed marine fish, including giant sea perch and groupers. The genome sequence is nearly identical to the genome of the orange-spotted grouper iridovirus. PMID:27125488

  15. Arctic Sea Level Reconstruction

    DEFF Research Database (Denmark)

    Svendsen, Peter Limkilde

    Reconstruction of historical Arctic sea level is very difficult due to the limited coverage and quality of tide gauge and altimetry data in the area. This thesis addresses many of these issues, and discusses strategies to help achieve a stable and plausible reconstruction of Arctic sea level from...... 1950 to today.The primary record of historical sea level, on the order of several decades to a few centuries, is tide gauges. Tide gauge records from around the world are collected in the Permanent Service for Mean Sea Level (PSMSL) database, and includes data along the Arctic coasts. A reasonable...... amount of data is available along the Norwegian and Russian coasts since 1950, and most published research on Arctic sea level extends cautiously from these areas. Very little tide gauge data is available elsewhere in the Arctic, and records of a length of several decades,as generally recommended for sea...

  16. Sea lamprey mark type, marking rate, and parasite-host relationships for lake trout and other species in Lake Ontario

    Science.gov (United States)

    Lantry, Brian F.; Adams, Jean V.; Christie, Gavin; Schaner, Teodore; Bowlby, James; Keir, Michael; Lantry, Jana; Sullivan, Paul; Bishop, Daniel; Treska, Ted; Morrison, Bruce

    2015-01-01

    We examined how attack frequency by sea lampreys on fishes in Lake Ontario varied in response to sea lamprey abundance and preferred host abundance (lake trout > 433 mm). For this analysis we used two gill net assessment surveys, one angler creel survey, three salmonid spawning run datasets, one adult sea lamprey assessment, and a bottom trawl assessment of dead lake trout. The frequency of fresh sea lamprey marks observed on lake trout from assessment surveys was strongly related to the frequency of sea lamprey attacks observed on salmon and trout from the creel survey and spawning migrations. Attack frequencies on all salmonids examined were related to the ratio between the abundances of adult sea lampreys and lake trout. Reanalysis of the susceptibility to sea lamprey attack for lake trout strains stocked into Lake Ontario reaffirmed that Lake Superior strain lake trout were among the most and Seneca Lake strain among the least susceptible and that Lewis Lake strain lake trout were even more susceptible than the Superior strain. Seasonal attack frequencies indicated that as the number of observed sea lamprey attacks decreased during June–September, the ratio of healing to fresh marks also decreased. Simulation of the ratios of healing to fresh marks indicated that increased lethality of attacks by growing sea lampreys contributed to the decline in the ratios and supported laboratory studies about wound healing duration.

  17. South China Sea Challenge

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    China's attempts to solve disputes with ASEAN over the South China Sea help regional peace China's marine economy and security are currently faced with new challenges, requiring careful handling, especially in disputes with ASEAN countries and in promoting common development of the South China Sea. The outcome of how this is dealt with could undoubtedly pave the way for solutions to other oceanic disputes. The South China Sea is located south of

  18. Dilemmas in SEA application

    DEFF Research Database (Denmark)

    Lyhne, Ivar

    Dilemmas in SEA Application: The DK Energy SectorIvar Lyhne - lyhne@plan.aau.dk. Based on three years of collaborative research, this paper outlines dilemmas in the application of SEA in the strategic development of the Danish energy sector. The dilemmas are based on concrete examples from practice...... the Danish energy sector) are starting to get it right. Lessons for SEA implementation in similar contexts are proposed....

  19. A strain gauge

    DEFF Research Database (Denmark)

    2016-01-01

    The invention relates to a strain gauge of a carrier layer and a meandering measurement grid positioned on the carrier layer, wherein the strain gauge comprises two reinforcement members positioned on the carrier layer at opposite ends of the measurement grid in the axial direction....... The reinforcement members are each placed within a certain axial distance to the measurement grid with the axial distance being equal to or smaller than a factor times the grid spacing. The invention further relates to a multi-axial strain gauge such as a bi-axial strain gauge or a strain gauge rosette where each...... of the strain gauges comprises reinforcement members. The invention further relates to a method for manufacturing a strain gauge as mentioned above....

  20. Where's the P in Plankton? Phosphorus Allocation to DNA across Diverse Marine Picoplankton

    Science.gov (United States)

    Raney, S. E.; Popendorf, K.; Duhamel, S.

    2016-02-01

    Phosphorus (P) is a critical nutrient for survival, particularly in oligotrophic environments such as the Sargasso Sea. Microbes require phosphorus to build and maintain cellular components, including DNA, RNA, and lipids. We expect variation across microbes in the fraction of cellular P allocated to each of these components. We hypothesized that a high but variable percentage of cellular P will be allocated towards DNA. Studying cellular P allocation can offer insight into the role of different microbes in phosphorus cycling in low-P regions like the Sargasso Sea. To assess allocation of P to DNA, we first tested the efficiency of different DNA extraction methods and then analyzed the amount of extracted DNA from different microbial groups. We performed DNA extractions using four different extraction kits and determined Promega Reliaprep Blood gDNA Miniprep System to be the most efficient. We extracted DNA from cultured picoplankton which are representative of the most abundant species in the Sargasso Sea: Synechococcus (WH8102), Prochlorococcus (MED4 and MIT9301), and heterotrophic bacteria (HTCC2516 and HTCC2601). We found that the percentage of P allocated towards DNA varies across microbial species and across strains within the same genera. Additionally, we estimated the relative number of copies of the genome per cell, and found that more copies of the genome per cell, not necessarily a larger genome size, may correlate with allocating a larger percentage of cellular P towards DNA. By understanding how phosphorus cycling works on the molecular level in different species of picoplankton, we can develop a greater understanding of the role of these picoplankton in phosphorus cycling as a whole in the Sargasso Sea.

  1. Pelagic sea snakes dehydrate at sea

    Science.gov (United States)

    Lillywhite, Harvey B.; Sheehy, Coleman M.; Brischoux, François; Grech, Alana

    2014-01-01

    Secondarily marine vertebrates are thought to live independently of fresh water. Here, we demonstrate a paradigm shift for the widely distributed pelagic sea snake, Hydrophis (Pelamis) platurus, which dehydrates at sea and spends a significant part of its life in a dehydrated state corresponding to seasonal drought. Snakes that are captured following prolonged periods without rainfall have lower body water content, lower body condition and increased tendencies to drink fresh water than do snakes that are captured following seasonal periods of high rainfall. These animals do not drink seawater and must rehydrate by drinking from a freshwater lens that forms on the ocean surface during heavy precipitation. The new data based on field studies indicate unequivocally that this marine vertebrate dehydrates at sea where individuals may live in a dehydrated state for possibly six to seven months at a time. This information provides new insights for understanding water requirements of sea snakes, reasons for recent declines and extinctions of sea snakes and more accurate prediction for how changing patterns of precipitation might affect these and other secondarily marine vertebrates living in tropical oceans. PMID:24648228

  2. Pelagic sea snakes dehydrate at sea.

    Science.gov (United States)

    Lillywhite, Harvey B; Sheehy, Coleman M; Brischoux, François; Grech, Alana

    2014-05-07

    Secondarily marine vertebrates are thought to live independently of fresh water. Here, we demonstrate a paradigm shift for the widely distributed pelagic sea snake, Hydrophis (Pelamis) platurus, which dehydrates at sea and spends a significant part of its life in a dehydrated state corresponding to seasonal drought. Snakes that are captured following prolonged periods without rainfall have lower body water content, lower body condition and increased tendencies to drink fresh water than do snakes that are captured following seasonal periods of high rainfall. These animals do not drink seawater and must rehydrate by drinking from a freshwater lens that forms on the ocean surface during heavy precipitation. The new data based on field studies indicate unequivocally that this marine vertebrate dehydrates at sea where individuals may live in a dehydrated state for possibly six to seven months at a time. This information provides new insights for understanding water requirements of sea snakes, reasons for recent declines and extinctions of sea snakes and more accurate prediction for how changing patterns of precipitation might affect these and other secondarily marine vertebrates living in tropical oceans.

  3. Sea surface temperatures and salinities from platforms in the Barents Sea, Sea of Japan, North Atlantic Ocean, Philippine Sea, Red Sea, and the South China Sea (Nan Hai) from 1896-1950 (NODC Accession 0000506)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Surface temperatures and salinities were collected in the Barents Sea, Sea of Japan, North Atlantic Ocean, Philippine Sea, Red Sea, and South China Sea (Nan Hai)...

  4. Isolation of novel psychrophilic bacteria from Arctic sea ice

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    The phylogenetic diversity of culturable psychrophilic bacteria associated with sea ice from the high latitude regions of Canadian Basin and Chukchi Sea, Arctic, was investigated. A total of 34 psychropilic strains were isolated using three methods of (Ⅰ) dilution plating (at 4 ℃), (Ⅱ) bath culturing (at -1 ℃) and dilution plating, and (Ⅲ) cold shock (-20 ℃ for 24 h), bath culturing and dilution plating under aerobic conditions. Sea-ice samples were exposed to -20 ℃ for 24 h that might reduce the number of common microorganisms and encourage outgrowth of psychrophilic strains. This process might be able to be introduced to isolation psychrophilic bacteria from other environmental samples in future study. 16S rDNA nearly full-length sequence analysis revealed that psychrophilic strains felled in two phylogenetic divisions, γ-proteobacteria (in the genera Colwellia、Marinobacter、Shewanella、Glaciecola、Marinomonas and Pseudoalteromonas) and Cytophaga-Flexibacter-Bacteroides (Flavobacterium and Psychroflexus). Fifteen of bacterial isolates quite likely represented novel species (16S rDNA sequence similarity below 98%). One of strains (BSi20002) from Canadian Basin showed 100% sequence similarity to that of Marinobacter sp. ANT8277 isolated from the Antarctic Weddell sea ice, suggesting bacteria may have a bipolar distribution at the species level.

  5. Strain y strain rate para dummies

    Directory of Open Access Journals (Sweden)

    Pastor Olaya, MD

    2011-11-01

    Full Text Available Desarrollos recientes en el campo de la ecocardiografía han permitido a los cardiólogos cuantificar de manera objetiva la función miocárdica regional y global con base en los conceptos de deformación (strain y velocidad de deformación (strain rate que pueden calcularse de manera no invasiva tanto en el ventrículo izquierdo como en el derecho, y suministrar valiosa información en múltiples escenarios clínicos. Dado que esta técnica novedosa y promisoria se utiliza cada vez más en la clínica y en estudios de investigación, se hace necesario el conocimiento adecuado de sus principios, así como de sus aspectos técnicos, alcances y limitaciones para una mejor implementación. En este artículo se busca dar explicación a los conceptos fundamentales y las potenciales aplicaciones clínicas de la strain y la strain rate derivados por speckle tracking (strain 2D.

  6. Somalia ... From the Sea

    Science.gov (United States)

    2009-07-01

    from the Sea, p. 7. 65. Robert D. Heinl, Jr., “Inchon, 1950,” in As- sault from the Sea: Essays on the History of Amphibious Warfare, ed. Merrill L...Mohamed Haji. Historical Dictionary of Somalia. New ed. Lanham, Md.: Scare- crow , 2003. Natsios, Andrew S. U.S. Foreign Policy and the Four Horsemen of

  7. SEA in Southern Africa

    CSIR Research Space (South Africa)

    Audouin, M

    2011-01-01

    Full Text Available in a number of them. Despite these trends, however, the opportunities that SEA can offer to facilitate sustainable development are not being realized. In this chapter, the authors describe the emergence of SEA in the post-colonial, democratic context...

  8. Oceanography of marginal seas

    Digital Repository Service at National Institute of Oceanography (India)

    DileepKumar, M.

    dioxide in intermediate layers falls from approx. 1000 mu atm in the southern end to approx. 500 mu atm in the northern Red Sea. Temperature in Atlantis II deep and brine level in Discovery deep in the Red Sea seem to be increasing in recent years...

  9. Three dimensional strained semiconductors

    Energy Technology Data Exchange (ETDEWEB)

    Voss, Lars; Conway, Adam; Nikolic, Rebecca J.; Leao, Cedric Rocha; Shao, Qinghui

    2016-11-08

    In one embodiment, an apparatus includes a three dimensional structure comprising a semiconductor material, and at least one thin film in contact with at least one exterior surface of the three dimensional structure for inducing a strain in the structure, the thin film being characterized as providing at least one of: an induced strain of at least 0.05%, and an induced strain in at least 5% of a volume of the three dimensional structure. In another embodiment, a method includes forming a three dimensional structure comprising a semiconductor material, and depositing at least one thin film on at least one surface of the three dimensional structure for inducing a strain in the structure, the thin film being characterized as providing at least one of: an induced strain of at least 0.05%, and an induced strain in at least 5% of a volume of the structure.

  10. Dilemmas in SEA application

    DEFF Research Database (Denmark)

    Lyhne, Ivar

    Dilemmas in SEA Application: The DK Energy SectorIvar Lyhne - lyhne@plan.aau.dk. Based on three years of collaborative research, this paper outlines dilemmas in the application of SEA in the strategic development of the Danish energy sector. The dilemmas are based on concrete examples from practice...... in the implementation of SEA in the sector, and they concern, e.g., strategic choices in transmission network development and ministerial choices on location of energy production units. The paper outlines the roots of the dilemmas as well as their implications for timing and content of SEA. The verdict is that we (in...... the Danish energy sector) are starting to get it right. Lessons for SEA implementation in similar contexts are proposed....

  11. IOMASA SEA ICE DEVELOPMENTS

    DEFF Research Database (Denmark)

    Andersen, Søren; Tonboe, Rasmus; Heygster, Georg

    2005-01-01

    Sensitivity studies show that the radiometer ice concentration estimate can be biased by +10% by anomalous atmospheric emissivity and -20% by anomalous ice surface emissivity. The aim of the sea ice activities in EU 5th FP project IOMASA is to improve sea ice concentration estimates at higher...... spatial resolution. The project is in the process of facilitating an ice concentration observing system through validation and a better understanding of the microwave radiative transfer of the sea ice and overlying snow layers. By use of a novel modelling approach, it is possible to better detect...... and determine the circumstances that may lead to anomalous sea ice concentration retrieval as well as to assess and possibly minimize the sensitivities of the retrieval system. Through an active partnership with the SAF on Ocean and Sea Ice, a prototype system will be implemented as an experimental product...

  12. Indicators and SEA

    DEFF Research Database (Denmark)

    Gao, Jingjing; Kørnøv, Lone; Christensen, Per

    Abstract: Indicators are widely used in SEA to measure, communicate and monitor impacts from a proposed policy, plan or programme, and can improve the effectiveness for the SEA by simplifying the complexity of both assessment and presentation. Indicators can be seen as part of the implementation...... process helping to understand, communicate and, integrate important environmental issues in planning and decision-making. On the other hand, use of indicators can also limit SEA effectiveness, if the ones chosen are biased or limited, if the aggregation gives incorrect interpretation...... and if the information requirement for different target groups is not addressed. Indicators are widely used in SEA to measure, communicate and monitor impacts from a proposed policy, plan or programme, and can improve the effectiveness for the SEA by simplifying the complexity of both assessment and presentation...

  13. IOMASA SEA ICE DEVELOPMENTS

    DEFF Research Database (Denmark)

    Andersen, Søren; Tonboe, Rasmus; Heygster, Georg

    2005-01-01

    Sensitivity studies show that the radiometer ice concentration estimate can be biased by +10% by anomalous atmospheric emissivity and -20% by anomalous ice surface emissivity. The aim of the sea ice activities in EU 5th FP project IOMASA is to improve sea ice concentration estimates at higher...... spatial resolution. The project is in the process of facilitating an ice concentration observing system through validation and a better understanding of the microwave radiative transfer of the sea ice and overlying snow layers. By use of a novel modelling approach, it is possible to better detect...... and determine the circumstances that may lead to anomalous sea ice concentration retrieval as well as to assess and possibly minimize the sensitivities of the retrieval system. Through an active partnership with the SAF on Ocean and Sea Ice, a prototype system will be implemented as an experimental product...

  14. Strain-engineered MOSFETs

    CERN Document Server

    Maiti, CK

    2012-01-01

    Currently strain engineering is the main technique used to enhance the performance of advanced silicon-based metal-oxide-semiconductor field-effect transistors (MOSFETs). Written from an engineering application standpoint, Strain-Engineered MOSFETs introduces promising strain techniques to fabricate strain-engineered MOSFETs and to methods to assess the applications of these techniques. The book provides the background and physical insight needed to understand new and future developments in the modeling and design of n- and p-MOSFETs at nanoscale. This book focuses on recent developments in st

  15. CICE, The Los Alamos Sea Ice Model

    Energy Technology Data Exchange (ETDEWEB)

    2017-05-12

    The Los Alamos sea ice model (CICE) is the result of an effort to develop a computationally efficient sea ice component for a fully coupled atmosphere–land–ocean–ice global climate model. It was originally designed to be compatible with the Parallel Ocean Program (POP), an ocean circulation model developed at Los Alamos National Laboratory for use on massively parallel computers. CICE has several interacting components: a vertical thermodynamic model that computes local growth rates of snow and ice due to vertical conductive, radiative and turbulent fluxes, along with snowfall; an elastic-viscous-plastic model of ice dynamics, which predicts the velocity field of the ice pack based on a model of the material strength of the ice; an incremental remapping transport model that describes horizontal advection of the areal concentration, ice and snow volume and other state variables; and a ridging parameterization that transfers ice among thickness categories based on energetic balances and rates of strain. It also includes a biogeochemical model that describes evolution of the ice ecosystem. The CICE sea ice model is used for climate research as one component of complex global earth system models that include atmosphere, land, ocean and biogeochemistry components. It is also used for operational sea ice forecasting in the polar regions and in numerical weather prediction models.

  16. Can the Gulf Stream induce coherent short-term fluctuations in sea level along the US East Coast? A modeling study

    Science.gov (United States)

    Ezer, Tal

    2016-02-01

    Much attention has been given in recent years to observations and models that show that variations in the transport of the Atlantic Meridional Overturning Circulation (AMOC) and in the Gulf Stream (GS) can contribute to interannual, decadal, and multi-decadal variations in coastal sea level (CSL) along the US East Coast. However, less is known about the impact of short-term (time scales of days to weeks) fluctuations in the GS and their impact on CSL anomalies. Some observations suggest that these anomalies can cause unpredictable minor tidal flooding in low-lying areas when the GS suddenly weakens. Can these short-term CSL variations be attributed to changes in the transport of the GS? An idealized numerical model of the GS has been set up to test this proposition. The regional model uses a 1/12° grid with a simplified coastline to eliminate impacts from estuaries and small-scale coastal features and thus isolate the GS impact. The GS in the model is driven by inflows/outflows, representing the Florida Current (FC), the Slope Current (SC), and the Sargasso Sea (SS) flows. Forcing the model with an oscillatory FC transport with a period of 2, 5, and 10 days produced coherent CSL variations from Florida to the Gulf of Maine with similar periods. However, when imposing variations in the transports of the SC or the SS, they induce CSL variations only north of Cape Hatteras. The suggested mechanism is that variations in GS transport produce variations in sea level gradient across the entire GS length and this large-scale signal is then transmitted into the shelf by the generation of coastal-trapped waves (CTW). In this idealized model, the CSL variations induced by variations of ˜10 Sv in the transport of the GS are found to resemble CSL variations induced by ˜5 m s-1 zonal wind fluctuations, though the mechanisms of wind-driven and GS-driven sea level are quite different. Better understanding of the relation between variations in offshore currents and CSL will help

  17. Investigation and Isolation of Cellulase-Producing microorganisms in the Red Sea

    KAUST Repository

    Fatani, Siham

    2016-05-01

    Cellulolytic microorganisms are considered to be key players in biorefinery, especially for the utilization of plant biomass. These organisms have been isolated from various environments. The Red Sea is one of the seas with high biodiversity and a unique environment, characterized by high water temperature and high salinity . However, there is little information regarding cellulases in Red Sea environments. The aim of the present study is to evaluate the Red Sea as a gene resource for microbial cellulase. I first surveyed microbial cellulases in the Red Sea using a method called metagenomes, and then investigated their abundance and diversity. My survey revealed that the Red Sea biome has a substantial abundance and a wide range of cellulase enzymes with substantial abundance, when compared with those in other environments. Next, I tried to isolate cellulase-active microorganisms from the Red Sea and I successfully obtained seven strains of four different taxonomic groups. These strains showed a similarity of 99% identity to Aspergillus ustus, 99% to Staphylococcus pasteuri, 99% to Bacillus aerius and 99% to Bacillus subtilis. The enzyme assay I conducted, revealed that these strains actually secreted active cellulases. These results suggest that the Red Sea environment can be, indeed, an excellent gene resource of microbial cellulases.

  18. Sprains and Strains

    Science.gov (United States)

    ... and chronic. An acute strain occurs when a muscle becomes strained or pulled — or may even tear — when it stretches unusually far or abruptly. Acute ... and increases joint range of motion, making the muscles less tight and less prone to trauma ... Environmental conditions. Slippery or uneven surfaces can make ...

  19. Highly Strained Organophosphorus Compounds

    NARCIS (Netherlands)

    Slootweg, J.C.

    2005-01-01

    In our research on small, strained organophosphorus ring systems we became interested in the synthesis and applications of species that are even more strained than the parent phosphirane, by introducing an exocyclic double bond (methylenephosphirane), and by cyclopropyl spirofusion to the edge (e.g

  20. A Preliminary Study of the Microbial Resources and Their Biological Activities of the East China Sea

    Directory of Open Access Journals (Sweden)

    Xiaoling Lu

    2011-01-01

    Full Text Available East China Sea is one of the four sea areas in China, which possesses peculiar ecological environment and many kinds of living creatures, especially the microorganisms. We established the East China Sea microorganism library (during 2006–2010 for the first time, which stored about 30000 strains that covered most kinds of the species. In this paper, 395 pure strains of East China Sea microorganism library which belong to 33 different genera were mainly introduced. Sulfitobacter, Halomonas, Bacillus, Pseudoalteromonas, and Idiomarina were the most dominant species. On the large-scale biological activity screening of the 395 strains, 100 strains possess different biological activities based on different screening models, of which 11.4% strains have antibacterial activities, 15.9% have cytotoxicity activities, and 6.1% have antioxidation activities. Besides, the secondary metabolites of 6 strains with strong biological activities were studied systematically; diketopiperazines and macrocyclic lactones are the active secondary metabolites. The species and the biological activity of microorganisms diversity, the abundant structure type of the secondary metabolites, and their bioactivities all indicate that East China Sea is a potent marine microorganisms-derived developing resource for drug discovery.

  1. Dead sea water intoxication.

    Science.gov (United States)

    Levy-Khademi, Floris; Brooks, Rebecca; Maayan, Channa; Tenenbaum, Ariel; Wexler, Isaiah D

    2012-08-01

    Near drowning in the Dead Sea is associated with both respiratory manifestations and severe electrolyte abnormalities. It is often difficult to distinguish between the contributions of sea water aspiration or ingestion to clinical manifestations. We present a unique case of accidental ingestion of a large amount of Dead Sea water through a gastrostomy tube in which a patient with familial dysautonomia presented with severe electrolyte disturbances. Forced diuresis with large amounts of intravenous fluids resulted in clinical and biochemical improvement. Full recovery was achieved after 2 days of treatment.

  2. Strain y strain rate para dummies Strain and strain rate for dummies

    Directory of Open Access Journals (Sweden)

    Pastor Olaya

    2011-12-01

    Full Text Available Desarrollos recientes en el campo de la ecocardiografía han permitido a los cardiólogos cuantificar de manera objetiva la función miocárdica regional y global con base en los conceptos de deformación (strain y velocidad de deformación (strain rate que pueden calcularse de manera no invasiva tanto en el ventrículo izquierdo como en el derecho, y suministrar valiosa información en múltiples escenarios clínicos. Dado que esta técnica novedosa y promisoria se utiliza cada vez más en la clínica y en estudios de investigación, se hace necesario el conocimiento adecuado de sus principios, así como de sus aspectos técnicos, alcances y limitaciones para una mejor implementación. En este artículo se busca dar explicación a los conceptos fundamentales y las potenciales aplicaciones clínicas de la strain y la strain rate derivados por speckle tracking (strain 2D.Recent developments in the field of echocardiography have allowed cardiologists to objectively quantify regional and global myocardial function based on the deformation (strain and strain rate which can be calculated non-invasively in both the left or right ventricle, and provide valuable information in multiple clinical settings. Since this new technique is promising and is being increasingly used in clinical and research studies, the adequate knowledge of its principles and its technical aspects, scope and limitations are necessary for its better implementation. This article seeks to explain fundamental concepts and potential clinical applications of strain and strain rate derived by speckle tracking (2D strain.

  3. The north Sulu Sea productivity

    Science.gov (United States)

    Xiao, Z.

    2009-12-01

    The Sulu Sea is a part of the western North Pacific. It is a closed sea for its deep water and a semi-closed sea for its upper layer. The Sulu Sea exchanges mainly surface waters with the South China Sea and the Celebes Sea. The Sulu Sea is more productive than the adjacent South China Sea (Jones, 2002). On the basis of MERIS satellite observations from 2002 to 2008, we focus on the high-chlorophyll area as an indicator of the abundance of primary productivity in the Sulu Sea. Strong chlorophyll concentration in the north Sulu Sea close to the Mindoro Strait mainly occurs from December to March and low chlorophyll concentration happens in April to November. The adjacent South China Sea on the other side of Mindoro Strait has shown persistent signs of low chlorophyll concentration. Based on 1/8° Global Navy Coastal Ocean Model, the intrusion of the South China Sea waters through the Mindoro Strait to the Sulu Sea from April to November is the main reason for the low chlorophyll concentration observed in the north Sulu Sea. During April to November, the South China Sea waters flow through the Mindoro Strait and stay on the surface of the north Sulu Sea because of their low density. The north Sulu Sea waters mix with fresher waters coming from the South China Sea without new nutrients supply. When the inflow from South China Sea to Sulu Sea ceases in December to March, the upwelling due to the summer monsoon wind becomes an important mechanism supplying deep nutrients to the surface water which lead to high chlorophyll concentration. Jones, I.S.F., 2002. Primary production in the Sulu Sea. Proceedings of the Indian Academy of Sciences-Earth and Planetary Sciences 111, 209-213.

  4. Sea Scallop Survey

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The standardized NEFSC Sea Scallop Survey began in 1980 and has covered an area from Cape Hatteras to Georges Bank. The survey aims to determine the distribution and...

  5. Pollution of coastal seas

    Digital Repository Service at National Institute of Oceanography (India)

    Varkey, M.J.

    cities. Various types of wastes, if not properly treated, would cause serious pollution of these shallow seas endangering marine life and spoiling recreational facilities. Different polluting agents like sewage, chemicals, industrial coolants etc...

  6. A Sea Floor Penetrometer.

    Science.gov (United States)

    processed through an analog-to-digital (A/D) converter, and stored in the memory of a mini-computer. Computer algorithms are applied to the deceleration data to provide real-time sea floor classification.

  7. Baltic Sea: Radionuclides

    DEFF Research Database (Denmark)

    Nielsen, Sven Poul; Lüning, Maria; Ilus, Erkki

    2011-01-01

    The most significant source of anthropogenic radioactivity in the Baltic Sea is fallout from the accident at the Chernobyl nuclear power plant in 1986. The second most important source is global fallout from atmospheric nuclear weapons tests carried out during the late 1950s and early 1960s....... Radioactivity inputs into the Baltic Sea from nuclear reprocessing plants in Western Europe have become of minor importance due to significant reduction of discharges in recent years. In terms of input of 137Cs into the Baltic Sea, Chernobyl fallout has contributed about 82% and nuclear weapons test fallout...... about 14%. For 90Sr in the Baltic Sea, input from atmospheric fallout from nuclear weapons tests has contributed about 81%, while the contribution from Chernobyl fallout was about 13%. Cesium-137 is the main indicator of Baltic seawater with respect to anthropogenic radioactivity. The highest...

  8. South China Sea.

    Science.gov (United States)

    Morton, B; Blackmore, G

    2001-12-01

    The South China Sea is poorly understood in terms of its marine biota, ecology and the human impacts upon it. What is known is most often contained in reports and workshop and conference documents that are not available to the wider scientific community. The South China Sea has an area of some 3.3 million km2 and depths range from the shallowest coastal fringe to 5377 m in the Manila Trench. It is also studded with numerous islets, atolls and reefs many of which are just awash at low tide. It is largely confined within the Tropic of Cancer and, therefore, experiences a monsoonal climate being influenced by the Southwest Monsoon in summer and the Northeast Monsoon in winter. The South China Sea is a marginal sea and, therefore, largely surrounded by land. Countries that have a major influence on and claims to the sea include China, Malaysia, the Philippines and Vietnam, although Thailand, Indonesia and Taiwan have some too. The coastal fringes of the South China Sea are home to about 270 million people that have had some of the fastest developing and most vibrant economies on the globe. Consequently, anthropogenic impacts, such as over-exploitation of resources and pollution, are anticipated to be huge although, in reality, relatively little is known about them. The Indo-West Pacific biogeographic province, at the centre of which the South China Sea lies, is probably the world's most diverse shallow-water marine area. Of three major nearshore habitat types, i.e., coral reefs, mangroves and seagrasses, 45 mangrove species out of a global total of 51, most of the currently recognised 70 coral genera and 20 of 50 known seagrass species have been recorded from the South China Sea. The island groups of the South China Sea are all disputed and sovereignty is claimed over them by a number of countries. Conflicts have in recent decades arisen over them because of perceived national rights. It is perhaps because of this that so little research has been undertaken on the

  9. South China Sea

    Energy Technology Data Exchange (ETDEWEB)

    Morton, Brian [Hong Kong Univ., Swire Inst. of Marine Science, Hong Kong (China); Hong Kong Univ., Dept. of Ecology and Biodiversity, Hong Kong (China); Blackmore, Graham [Hong Kong Univ. of Science and Technology, Dept. of Biology, Hong Kong (China)

    2001-07-01

    The South China Sea is poorly understood in terms of its marine biota, ecology and the human impacts upon it. What is known is most often contained in reports and workshops and conference documents that are not available to the wider scientific community. The South China Sea has an area of some 3.3 million km{sup 2} and depths range from the shallowest coastal fringe to 5377m in the Manila Trench. It is also studded with numerous islets, atolls and reefs many of which are just awash at low tide. It is largely confined within the Tropic of Cancer and, therefore, experiences a monsoonal climate being influenced by the Southwest Monsoon in summer and the Northeast Monsoon in winter. The South China Sea is a marginal sea and, therefore, largely surrounded by land. Countries that have a major influence on and claims to the sea include China, Malaysia, the Philippines and Vietnam, although Thailand, Indonesia and Taiwan have some too. The coastal fringes of the South China Sea are home to about 270 million people that have had some of the fastest developing and most vibrant economics on the globe. Consequently, anthropogenic impacts, such as over-exploitation of resources and pollution, are anticipated to be huge although, in reality, relatively little is known about them. The Indo-West Pacific biogeographic province, at the centre of which the South China Sea lies, is probably the world's most diverse shallow-water marine area. Of three major nearshore habitat types, i.e., coral reefs, mangroves and seagrasses, 45 mangrove species out of a global total of 51, most of the currently recognised 70 coral genera and 20 of 50 known seagrass species have been recorded from the South China Sea. The island groups of the South China Sea are all disputed and sovereignty is claimed over them by a number of countries. Conflicts have in recent decades arisen over them because of perceived national rights. It is perhaps because of this that so little research has been undertaken

  10. South China Sea

    Science.gov (United States)

    Morton, Brian; Blackmore, Graham

    2001-01-01

    The South China Sea is poorly understood in terms of its marine biota, ecology and the human impacts upon it. What is known is most often contained in reports and workshop and conference documents that are not available to the wider scientific community. The South China Sea has an area of some 3.3 million km2 and depths range from the shallowest coastal fringe to 5377 m in the Manila Trench. It is also studded with numerous islets, atolls and reefs many of which are just awash at low tide. It is largely confined within the Tropic of Cancer and, therefore, experiences a monsoonal climate being influenced by the Southwest Monsoon in summer and the Northeast Monsoon in winter. The South China Sea is a marginal sea and, therefore, largely surrounded by land. Countries that have a major influence on and claims to the sea include China, Malaysia, the Philippines and Vietnam, although Thailand, Indonesia and Taiwan have some too. The coastal fringes of the South China Sea are home to about 270 million people that have had some of the fastest developing and most vibrant economies on the globe. Consequently, anthropogenic impacts, such as over-exploitation of resources and pollution, are anticipated to be huge although, in reality, relatively little is known about them. The Indo-West Pacific biogeographic province, at the centre of which the South China Sea lies, is probably the world's most diverse shallow-water marine area. Of the three major nearshore habitat types, i.e., coral reefs, mangroves and seagrasses, 45 mangrove species out of a global of 51, most of the currently recognised 70 coral genera and 20 of 50 known seagrass species have been recorded from the South China Sea. The island groups of the South China Sea are all disputed and sovereignty is claimed over them by a number of countries. Conflicts have in recent decades arisen over them because of perceived national rights. It is perhaps because of this that so little research has been undertaken on the South

  11. Contemporary sea level rise.

    Science.gov (United States)

    Cazenave, Anny; Llovel, William

    2010-01-01

    Measuring sea level change and understanding its causes has considerably improved in the recent years, essentially because new in situ and remote sensing observations have become available. Here we report on most recent results on contemporary sea level rise. We first present sea level observations from tide gauges over the twentieth century and from satellite altimetry since the early 1990s. We next discuss the most recent progress made in quantifying the processes causing sea level change on timescales ranging from years to decades, i.e., thermal expansion of the oceans, land ice mass loss, and land water-storage change. We show that for the 1993-2007 time span, the sum of climate-related contributions (2.85 +/- 0.35 mm year(-1)) is only slightly less than altimetry-based sea level rise (3.3 +/- 0.4 mm year(-1)): approximately 30% of the observed rate of rise is due to ocean thermal expansion and approximately 55% results from land ice melt. Recent acceleration in glacier melting and ice mass loss from the ice sheets increases the latter contribution up to 80% for the past five years. We also review the main causes of regional variability in sea level trends: The dominant contribution results from nonuniform changes in ocean thermal expansion.

  12. Projecting future sea level

    Science.gov (United States)

    Cayan, Daniel R.; Bromirski, Peter; Hayhoe, Katharine; Tyree, Mary; Dettinger, Mike; Flick, Reinhard

    2006-01-01

    California’s coastal observations and global model projections indicate that California’s open coast and estuaries will experience increasing sea levels over the next century. Sea level rise has affected much of the coast of California, including the Southern California coast, the Central California open coast, and the San Francisco Bay and upper estuary. These trends, quantified from a small set of California tide gages, have ranged from 10–20 centimeters (cm) (3.9–7.9 inches) per century, quite similar to that estimated for global mean sea level. So far, there is little evidence that the rate of rise has accelerated, and the rate of rise at California tide gages has actually flattened since 1980, but projections suggest substantial sea level rise may occur over the next century. Climate change simulations project a substantial rate of global sea level rise over the next century due to thermal expansion as the oceans warm and runoff from melting land-based snow and ice accelerates. Sea level rise projected from the models increases with the amount of warming. Relative to sea levels in 2000, by the 2070–2099 period, sea level rise projections range from 11–54 cm (4.3–21 in) for simulations following the lower (B1) greenhouse gas (GHG) emissions scenario, from 14–61 cm (5.5–24 in) for the middle-upper (A2) emission scenario, and from 17–72 cm (6.7–28 in) for the highest (A1fi) scenario. In addition to relatively steady secular trends, sea levels along the California coast undergo shorter period variability above or below predicted tide levels and changes associated with long-term trends. These variations are caused by weather events and by seasonal to decadal climate fluctuations over the Pacific Ocean that in turn affect the Pacific coast. Highest coastal sea levels have occurred when winter storms and Pacific climate disturbances, such as El Niño, have coincided with high astronomical tides. This study considers a range of projected future

  13. Hamstring strain - aftercare

    Science.gov (United States)

    ... Elsevier Saunders; 2015:chap 88. Reider B, Davies GJ, Provencher MT. Muscle strains about the hip and thigh. In: Reider B, Davies GJ, Provencher MT, eds. Orthopaedic Rehabilitation of the Athlete . ...

  14. The strained state cosmology

    CERN Document Server

    Tartaglia, Angelo

    2015-01-01

    Starting from some relevant facts concerning the behaviour of the universe over large scale and time span, the analogy between the geometric approach of General Relativ- ity and the classical description of an elastic strained material continuum is discussed. Extending the elastic deformation approach to four dimensions it is shown that the accelerated expansion of the universe is recovered. The strain field of space-time repro- duces properties similar to the ones ascribed to the dark energy currently called in to explain the accelerated expansion. The strain field in the primordial universe behaves as radiation, but asymptotically it reproduces the cosmological constant. Subjecting the theory to a number of cosmological tests confirms the soundness of the approach and gives an optimal value for the one parameter of the model, i.e. the bulk modulus of the space-time continuum. Finally various aspects of the Strained State Cosmology (SSC) are discussed and contrasted with some non-linear massive gravity theor...

  15. Sea lamprey mark type, wounding rate, and parasite-host preference and abundance relationships for lake trout and other species in Lake Ontario

    Science.gov (United States)

    Lantry, Brian F.; Adams, Jean; Christie, Gavin; Schaner, Teodore; Bowlby, James; Keir, Michael; Lantry, Jana; Sullivan, Paul; Bishop, Daniel; Treska, Ted; Morrison, Bruce

    2015-01-01

    We examined how attack frequency by sea lampreys on fishes in Lake Ontario varied in response to sea lamprey abundance and preferred host abundance (lake trout > 433 mm). For this analysis we used two gill net assessment surveys, one angler creel survey, three salmonid spawning run datasets, one adult sea lamprey assessment, and a bottom trawl assessment of dead lake trout. The frequency of fresh sea lamprey marks observed on lake trout from assessment surveys was strongly related to the frequency of sea lamprey attacks observed on salmon and trout from the creel survey and spawning migrations. Attack frequencies on all salmonids examined were related to the ratio between the abundances of adult sea lampreys and lake trout. Reanalysis of the susceptibility to sea lamprey attack for lake trout strains stocked into Lake Ontario reaffirmed that Lake Superior strain lake trout were among the most and Seneca Lake strain among the least susceptible and that Lewis Lake strain lake trout were even more susceptible than the Superior strain. Seasonal attack frequencies indicated that as the number of observed sea lamprey attacks decreased during June–September, the ratio of healing to fresh marks also decreased. Simulation of the ratios of healing to fresh marks indicated that increased lethality of attacks by growing sea lampreys contributed to the decline in the ratios and supported laboratory studies about wound healing duration.

  16. Virulence Profiles of Vibrio vulnificus in German Coastal Waters, a Comparison of North Sea and Baltic Sea Isolates

    Directory of Open Access Journals (Sweden)

    Nadja Bier

    2015-12-01

    Full Text Available Vibrio vulnificus is a halophilic bacterium of coastal environments known for sporadically causing severe foodborne or wound infections. Global warming is expected to lead to a rising occurrence of V. vulnificus and an increasing incidence of human infections in Northern Europe. So far, infections in Germany were exclusively documented for the Baltic Sea coast, while no cases from the North Sea region have been reported. Regional variations in the prevalence of infections may be influenced by differences in the pathogenicity of V. vulnificus populations in both areas. This study aimed to compare the distribution of virulence-associated traits and genotypes among 101 V. vulnificus isolates from the Baltic Sea and North Sea in order to assess their pathogenicity potential. Furthermore, genetic relationships were examined by multilocus sequence typing (MLST. A high diversity of MLST sequences (74 sequence types and differences regarding the presence of six potential pathogenicity markers were observed in the V. vulnificus populations of both areas. Strains with genotypes and markers associated with pathogenicity are not restricted to a particular geographic region. This indicates that lack of reported cases in the North Sea region is not caused by the absence of potentially pathogenic strains.

  17. Psychological strain between nurses

    Directory of Open Access Journals (Sweden)

    Andrea Obročníková

    2015-12-01

    Full Text Available Aim: The aim of the study was to identify differences in perception of work (mental workload among nurses providing acute and chronic nursing care. Design: Study design is cross-sectional and descriptive. Methods: The sample of respondents consisted of 97 nurses working in departments Neurology, Anesthesiology and Intensive Care Unit of the hospital St. James in Bardejov, University Hospital of L. Pasteur in Košice and University Hospital J. A. Reiman in Prešov. To measure psychological strain, Meister's questionnaire for neuropsychological strain was used. Results: Increased psychological strain was observed in nurses providing acute care versus nurses providing chronic care, particularly in job satisfaction, long-term tolerance, time constraints, high responsibility, nervousness, fatigue and satiety. In comparison with the population norm, nurses in acute care achieved significantly higher indicators of factor I (strain and gross score as nurses in neurological care. A statistically significant relationship between psychological stress and age of nurses working in anesthesiology and intensive care departments was confirmed. Nurses with long term practical experience are exposed to intense mental stress (especially in the areas of strain and monotony. Conclusion: The results of our study suggest the reality that variable qualities of work related strain among nurses can lead to physical and emotional exhaustion.

  18. Photothermal strain imaging

    Science.gov (United States)

    Choi, Changhoon; Ahn, Joongho; Jeon, Seungwan; Kim, Chulhong

    2017-07-01

    Vulnerable plaques are the major cause of cardiovascular disease, but they are difficult to detect with conventional intravascular imaging techniques. Techniques are needed to identify plaque vulnerability based on the presence of lipids in plaque. Thermal strain imaging (TSI) is an imaging technique based on ultrasound (US) wave propagation speed, which varies with the medium temperature. In TSI, the strain that occurs during tissue temperature change can be used for lipid detection because it has a different tendency depending on the type of tissue. Here, we demonstrate photothermal strain imaging (pTSI) using an intravascular ultrasound catheter. pTSI is performed by slightly and selectively heating lipid using a relatively inexpensive continuous laser source. We applied a speckle-tracking algorithm to US B-mode images for strain calculations. As a result, the strain produced in porcine fat was different from the strain produced in water-bearing gelatin phantom, which made it possible to distinguish the two. This suggests that pTSI could potentially be a way of differentiating lipids in coronary artery.

  19. The Dead Sea

    Science.gov (United States)

    2006-01-01

    The Dead Sea is the lowest point on Earth at 418 meters below sea level, and also one of the saltiest bodies of water on Earth with a salinity of about 300 parts-per-thousand (nine times greater than ocean salinity). It is located on the border between Jordan and Israel, and is fed by the Jordan River. The Dead Sea is located in the Dead Sea Rift, formed as a result of the Arabian tectonic plate moving northward away from the African Plate. The mineral content of the Dead Sea is significantly different from that of ocean water, consisting of approximately 53% magnesium chloride, 37% potassium chloride and 8% sodium chloride. In the early part of the 20th century, the Dead Sea began to attract interest from chemists who deduced that the Sea was a natural deposit of potash and bromine. From the Dead Sea brine, Israel and Jordan produce 3.8 million tons potash, 200,000 tons elemental bromine, 45,000 tons caustic soda, 25, 000 tons magnesium metal, and sodium chloride. Both countries use extensive salt evaporation pans that have essentially diked the entire southern end of the Dead Sea. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet. ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products. The broad spectral coverage and high spectral resolution of ASTER provides scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active volcanoes; identifying crop stress; determining

  20. The Dead Sea

    Science.gov (United States)

    2006-01-01

    The Dead Sea is the lowest point on Earth at 418 meters below sea level, and also one of the saltiest bodies of water on Earth with a salinity of about 300 parts-per-thousand (nine times greater than ocean salinity). It is located on the border between Jordan and Israel, and is fed by the Jordan River. The Dead Sea is located in the Dead Sea Rift, formed as a result of the Arabian tectonic plate moving northward away from the African Plate. The mineral content of the Dead Sea is significantly different from that of ocean water, consisting of approximately 53% magnesium chloride, 37% potassium chloride and 8% sodium chloride. In the early part of the 20th century, the Dead Sea began to attract interest from chemists who deduced that the Sea was a natural deposit of potash and bromine. From the Dead Sea brine, Israel and Jordan produce 3.8 million tons potash, 200,000 tons elemental bromine, 45,000 tons caustic soda, 25, 000 tons magnesium metal, and sodium chloride. Both countries use extensive salt evaporation pans that have essentially diked the entire southern end of the Dead Sea. With its 14 spectral bands from the visible to the thermal infrared wavelength region, and its high spatial resolution of 15 to 90 meters (about 50 to 300 feet), ASTER images Earth to map and monitor the changing surface of our planet. ASTER is one of five Earth-observing instruments launched December 18, 1999, on NASA's Terra satellite. The instrument was built by Japan's Ministry of Economy, Trade and Industry. A joint U.S./Japan science team is responsible for validation and calibration of the instrument and the data products. The broad spectral coverage and high spectral resolution of ASTER provides scientists in numerous disciplines with critical information for surface mapping, and monitoring of dynamic conditions and temporal change. Example applications are: monitoring glacial advances and retreats; monitoring potentially active volcanoes; identifying crop stress; determining

  1. Strain: Fact or Fiction?

    Science.gov (United States)

    Heilbronner, Renée

    2017-04-01

    2017 marks the 50th anniversary of the publication of John Ramsay's well known textbook "Folding and Fracturing of Rocks" - ... and the 30th anniversary of the rejection of a rather less well known paper entitled "Strain: Fact or Fiction?" submitted by Renée Panozzo to the Journal of Structural Geology. The gist of the paper was simple and straight forward: it was argued that not every fabric that can be observed in deformed rocks is necessarily a measure of the amount of strain the rock incurred. A distinction was made between a general "fabric", i.e., the traceable geometry of grain boundaries, for example, and a so-called "strain fabric", i.e., the model geometry that would result from homogeneously straining an initially isotropic fabric and that would exhibit at least orthorhombic symmetry. To verify if a given fabric was indeed a strain fabric it was therefore suggested to use the SURFOR method (published by Panozzo) and to carry out a so-called strain test, i.e., a check of symmetry, before interpreting the results of a fabric analysis in terms of strain. The problem with the paper was that it was very obviously written out of frustration. The frustration came form having reviewed a number of manuscripts which tried to use the then novel SURFOR method for strain analysis without first checking if the the fabric was a indeed a "strain fabric" or not, and then blaming the SURFOR method for producing ambiguous results. As a result, the paper was not exactly well balanced and carefully thought out. It was considered "interesting but not scholarly" by one of the reviewers and down-right offensive by the second. To tell the truth, however, the paper was not formally rejected. The editor Sue Treagus strongly encouraged Panozzo to revise the paper, ... and 30 years later, I will follow her advise and offer a revised paper as a tribute to John Ramsay. To quote from the original manuscript: "We should be a little more impressed that strain works so well, and less

  2. Kara Sea radioactivity assessment

    Energy Technology Data Exchange (ETDEWEB)

    Osvath, I.; Povinec, P.P.; Baxter, M.S. [Marine Environment Laboratory, International Atomic Energy Agency, B.P. 800 MC (Monaco)

    1999-09-30

    Investigations following five international expeditions to the Kara Sea have shown that no radiologically significant contamination has occurred outside of the dumping sites in Novaya Zemlya bays. Increased levels of radionuclides in sediment have only been observed in Abrosimov and Stepovoy Bays very close to dumped containers. Evaluations of radionuclide inventories in water and sediment of the open Kara Sea and Novaya Zemlya bays as well as soil from the shore of Abrosimov bay have shown that radionuclide contamination of the open Kara Sea is mainly due to global fallout, with smaller contributions from the Sellafield reprocessing plant, the Chernobyl accident run-off from the Ob and Yenisey rivers and local fallout. Computer modelling results have shown that maximum annual doses of approximately 1 mSv are expected for a hypothetical critical group subsisting on fish caught in the Novaya Zemlya bays whereas populations living on the mainland can be expected to receive doses at least three orders of magnitude lower.

  3. Sea Spray Aerosols

    DEFF Research Database (Denmark)

    Butcher, Andrew Charles

    emissions produced directly from bubble bursting as the result of air entrainment from breaking waves and particles generated from secondary emissions of volatile organic compounds. In the first paper, we study the chemical properties of particles produced from several sea water proxies with the use...... of a cloud condensation nuclei ounter. Proxy solutions with high inorganic salt concentrations and some organics produce sea spray aerosol particles with little change in cloud condensation activity relative to pure salts. Comparison is made between a frit based method for bubble production and a plunging...... a relationship between plunging jet particle ux, oceanic particle ux, and energy dissipation rate in both systems. Previous sea spray aerosol studies dissipate an order of magnitude more energy for the same particle ux production as the open ocean. A scaling factor related to the energy expended in air...

  4. Sea Spray Aerosols

    DEFF Research Database (Denmark)

    Butcher, Andrew Charles

    emissions produced directly from bubble bursting as the result of air entrainment from breaking waves and particles generated from secondary emissions of volatile organic compounds. In the first paper, we study the chemical properties of particles produced from several sea water proxies with the use...... of a cloud condensation nuclei ounter. Proxy solutions with high inorganic salt concentrations and some organics produce sea spray aerosol particles with little change in cloud condensation activity relative to pure salts. Comparison is made between a frit based method for bubble production and a plunging...... a relationship between plunging jet particle ux, oceanic particle ux, and energy dissipation rate in both systems. Previous sea spray aerosol studies dissipate an order of magnitude more energy for the same particle ux production as the open ocean. A scaling factor related to the energy expended in air...

  5. Draft Genome Sequence of Plant Growth–Promoting Micrococcus luteus Strain K39 Isolated from Cyperus conglomeratus in Saudi Arabia

    KAUST Repository

    Lafi, Feras Fawzi

    2017-01-27

    Micrococcus luteus strain K39 is an endophyte bacterium isolated from roots of the desert plant Cyperus conglomeratus collected from the Red Sea shore, Thuwal, Saudi Arabia. The draft genome sequence of strain K39 revealed a number of enzymes involved in salinity and oxidative stress tolerance or having herbicide-resistance activity.

  6. Draft Genome Sequence of Plant Growth–Promoting Micrococcus luteus Strain K39 Isolated from Cyperus conglomeratus in Saudi Arabia

    Science.gov (United States)

    Lafi, Feras F.; Ramirez-Prado, Juan S.; Alam, Intikhab; Bajic, Vladimir B.

    2017-01-01

    ABSTRACT Micrococcus luteus strain K39 is an endophyte bacterium isolated from roots of the desert plant Cyperus conglomeratus collected from the Red Sea shore, Thuwal, Saudi Arabia. The draft genome sequence of strain K39 revealed a number of enzymes involved in salinity and oxidative stress tolerance or having herbicide-resistance activity. PMID:28126944

  7. Dynamics of sea level variations in the coastal Red Sea

    Science.gov (United States)

    Churchill, James; Abulnaja, Yasser; Nellayaputhenpeedika, Mohammedali; Limeburner, Richard; Lentz, Steven

    2016-04-01

    Sea level variations in the central Red Sea coastal zone span a range of roughly 1.2 m. Though relatively small, these water level changes can significantly impact the environment over the shallow reef tops prevalent in the central Red Sea, altering the water depth by a factor or two or more. While considerable scientific work has been directed at tidal and seasonal variations of Red Sea water level, very little attention has been given to elevation changes in an 'intermediate' frequency band, with periods of 2-30 d, even though motions in this band account for roughly half of the sea level variance in central Red Sea. We examined the sea level signal in this band using AVISO sea level anomaly (SLA) data, COARDAS wind data and measurements from pressure sensors maintained for more than five years at a number of locations in Saudi Arabian coastal waters. Empirical orthogonal function analysis of the SLA data indicates that longer-period (10-30 d) sea level variations in the intermediate band are dominated by coherent motions in a single mode that extends over most of the Red Sea axis. Idealized model results indicate that this large-scale mode of sea level motion is principally due to variations in the large-scale gradient of the along-axis wind. Our analysis indicates that coastal sea level motions at shorter periods (2-10 d) are principally generated by a combination of direct forcing by the local wind stress and forcing associated with large-scale wind stress gradients. However, also contributing to coastal sea level variations in the intermediate frequency band are mesoscale eddies, which are prevalent throughout the Red Sea basin, have a sea level signal of 10's of cm and produce relatively small-scale (order 50 km) changes in coastal sea level.

  8. Mediterranean, our sea

    Science.gov (United States)

    Markaki, Foteini

    2017-04-01

    My school (1o EPAL Ymittos -Athens, Greece) is a technical school of secondary education and throughout this school year being drafted a program of environmental education. The main theme is the Mediterranean Sea, the biggest closed sea extending between three continents. Topics studied: 1. Biodiversity and the risks threat. 2. The geophysics that characterize (earthquakes, volcanoes explosions, etc). 3. The Mediterranean Sea as environment anthropogenesis, a mosaic of other cultures and even place current notions of social phenomena (refugees). Pedagogical Objectives: Cognitive/Enviromental: 1. To investigate and understand the biodiversity of the Mediterranean Sea and the risks to threaten and phenomena that characterize. 2. To understand the position of the Mediterranean Sea in the land and the role of the historical, cultural and social human environment. 3. To come in contact with texts literary, social, articles on the Mediterranean. Psychomotor: 1. To work together and collect information for the Mediterranean Sea. 2. Experiential approach to the natural environment. 3. Develop critical thinking. 4. Undertake responsibilities for the presentation of the program. Emotional: 1. To feel joy from participation in the program. 2. Being sensitized and configure attitudes and actions of respect towards the environment. Methodology implementation: Teamwork. Interdisciplinary - holistic to dissemination of program recordings to courses curriculum. Study in the field. Gathering information from newspapers, magazines, internet, maps, and photographs. Experiential method- Project. Assessment methods and self-assessment. Fields of courses: Greek language- History- Biology- Chemistry- Technology Dissemination of results: Make a page of social media (facebook), a blog, enhancing environmental awareness via video, make an electronic poster.

  9. Filamentous phages prevalent in Pseudoalteromonas spp. confer properties advantageous to host survival in Arctic sea ice.

    Science.gov (United States)

    Yu, Zi-Chao; Chen, Xiu-Lan; Shen, Qing-Tao; Zhao, Dian-Li; Tang, Bai-Lu; Su, Hai-Nan; Wu, Zhao-Yu; Qin, Qi-Long; Xie, Bin-Bin; Zhang, Xi-Ying; Yu, Yong; Zhou, Bai-Cheng; Chen, Bo; Zhang, Yu-Zhong

    2015-03-17

    Sea ice is one of the most frigid environments for marine microbes. In contrast to other ocean ecosystems, microbes in permanent sea ice are space confined and subject to many extreme conditions, which change on a seasonal basis. How these microbial communities are regulated to survive the extreme sea ice environment is largely unknown. Here, we show that filamentous phages regulate the host bacterial community to improve survival of the host in permanent Arctic sea ice. We isolated a filamentous phage, f327, from an Arctic sea ice Pseudoalteromonas strain, and we demonstrated that this type of phage is widely distributed in Arctic sea ice. Growth experiments and transcriptome analysis indicated that this phage decreases the host growth rate, cell density and tolerance to NaCl and H2O2, but enhances its motility and chemotaxis. Our results suggest that the presence of the filamentous phage may be beneficial for survival of the host community in sea ice in winter, which is characterized by polar night, nutrient deficiency and high salinity, and that the filamentous phage may help avoid over blooming of the host in sea ice in summer, which is characterized by polar day, rich nutrient availability, intense radiation and high concentration of H2O2. Thus, while they cannot kill the host cells by lysing them, filamentous phages confer properties advantageous to host survival in the Arctic sea ice environment. Our study provides a foremost insight into the ecological role of filamentous phages in the Arctic sea ice ecosystem.

  10. Seasonal Change of Steric Sea Level in the GIN Seas

    Institute of Scientific and Technical Information of China (English)

    LI Lei; WANG Huijuan; SUN Ruili

    2011-01-01

    The Greenland Sea, Iceland Sea, and Norwegian Sea (GIN seas) form the main channel connecting the Arctic Ocean with other Oceans, where significant water and energy exchange take place, and play an important role in global climate change. In this study steric sea level, associated with temperature and salinity, in the GIN seas is examined based on analysis of the monthly temperature and salinity fields from Polar science center Hydrographic Climatology (PHC3.0). A method proposed by Tabata et al. is used to calculate steric sea level, in which, steric sea level change due to thermal expansion and haline contraction is termed as the thermosteric component (TC) and the halosteric component (SC), recpectively. Total steric sea level (TSSL) change is the sum of TC and SC. The study shows that SC is making more contributions than TC to the seasonal change of TSSL in the Greenland Sea, whereas TC contributes more in the Norwegian and the Iceland Seas. Annual variation of TSSL is larger than 50ram over most regions of the GIN Seas, and can be larger than 200mm at some locations such as 308mm at 76.5°N, 12.5°E and 246mm at 77.50N, 17.5°W.

  11. Analysis of Sea Spikes in Radar Sea Clutter Data

    NARCIS (Netherlands)

    Melief, H.W.; Greidanus, H.; Genderen, P. van; Hoogeboom, P.

    2006-01-01

    Abstract—In this paper three sets of high-resolution, coherent, and polarimetric radar sea clutter data are analyzed and compared with radar sea clutter models. The nature of the data allows a thorough analysis of the power, polarization and velocity of the sea clutter. It is shown that these

  12. Analysis of Sea Spikes in Radar Sea Clutter Data

    NARCIS (Netherlands)

    Melief, H.W.; Greidanus, H.; Genderen, P. van; Hoogeboom, P.

    2006-01-01

    Abstract—In this paper three sets of high-resolution, coherent, and polarimetric radar sea clutter data are analyzed and compared with radar sea clutter models. The nature of the data allows a thorough analysis of the power, polarization and velocity of the sea clutter. It is shown that these quanti

  13. Air-sea exchange studies at the North Sea

    NARCIS (Netherlands)

    Leeuw, G. de; Eijk, A.M.J. van; Kunz, G.J.; Veefkind, P.J.

    1996-01-01

    The North Sea can be considered as a local 'inner' sea in which many processes are quite different from these over the open ocean. The surrounding land has a major influence, being the source for man-made aerosols and gases, whereas the North Sea acts as a sink for these. At the same time the North

  14. SEA LEVEL (TOPEX/POSEIDON)

    Data.gov (United States)

    National Aeronautics and Space Administration — Sea level rise is caused by the thermal expansion of sea water due to climate warming and widespread melting of land ice. The TOPEX/POSEIDON mission a joint...

  15. Atlantic Flyway Sea Duck Survey

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The Atlantic Flyway Sea Duck Survey, conducted from 1991 to 2002 by the U.S. Fish and Wildlife Service, was established to record sea duck numbers using near shore...

  16. Seafloor Control on Sea Ice

    Science.gov (United States)

    Nghiem, S. V.; Clemente-Colon, P.; Rigor, I. G.; Hall, D. K.; Neumann, G.

    2011-01-01

    The seafloor has a profound role in Arctic sea ice formation and seasonal evolution. Ocean bathymetry controls the distribution and mixing of warm and cold waters, which may originate from different sources, thereby dictating the pattern of sea ice on the ocean surface. Sea ice dynamics, forced by surface winds, are also guided by seafloor features in preferential directions. Here, satellite mapping of sea ice together with buoy measurements are used to reveal the bathymetric control on sea ice growth and dynamics. Bathymetric effects on sea ice formation are clearly observed in the conformation between sea ice patterns and bathymetric characteristics in the peripheral seas. Beyond local features, bathymetric control appears over extensive ice-prone regions across the Arctic Ocean. The large-scale conformation between bathymetry and patterns of different synoptic sea ice classes, including seasonal and perennial sea ice, is identified. An implication of the bathymetric influence is that the maximum extent of the total sea ice cover is relatively stable, as observed by scatterometer data in the decade of the 2000s, while the minimum ice extent has decreased drastically. Because of the geologic control, the sea ice cover can expand only as far as it reaches the seashore, the continental shelf break, or other pronounced bathymetric features in the peripheral seas. Since the seafloor does not change significantly for decades or centuries, sea ice patterns can be recurrent around certain bathymetric features, which, once identified, may help improve short-term forecast and seasonal outlook of the sea ice cover. Moreover, the seafloor can indirectly influence cloud cover by its control on sea ice distribution, which differentially modulates the latent heat flux through ice covered and open water areas.

  17. Muscle strain injuries.

    Science.gov (United States)

    Garrett, W E

    1996-01-01

    One of the most common injuries seen in the office of the practicing physician is the muscle strain. Until recently, little data were available on the basic science and clinical application of this basic science for the treatment and prevention of muscle strains. Studies in the last 10 years represent action taken on the direction of investigation into muscle strain injuries from the laboratory and clinical fronts. Findings from the laboratory indicate that certain muscles are susceptible to strain injury (muscles that cross multiple joints or have complex architecture). These muscles have a strain threshold for both passive and active injury. Strain injury is not the result of muscle contraction alone, rather, strains are the result of excessive stretch or stretch while the muscle is being activated. When the muscle tears, the damage is localized very near the muscle-tendon junction. After injury, the muscle is weaker and at risk for further injury. The force output of the muscle returns over the following days as the muscle undertakes a predictable progression toward tissue healing. Current imaging studies have been used clinically to document the site of injury to the muscle-tendon junction. The commonly injured muscles have been described and include the hamstring, the rectus femoris, gastrocnemius, and adductor longus muscles. Injuries inconsistent with involvement of a single muscle-tendon junction proved to be at tendinous origins rather than within the muscle belly. Important information has also been provided regarding injuries with poor prognosis, which are potentially repairable surgically, including injuries to the rectus femoris muscle, the hamstring origin, and the abdominal wall. Data important to the management of common muscle injuries have been published. The risks of reinjury have been documented. The early efficacy and potential for long-term risks of nonsteroidal antiinflammatory agents have been shown. New data can also be applied to the field

  18. Studies on culture condition and extracellular hydrolase of psychrophilic bacteria from Arctic sea ice

    Institute of Scientific and Technical Information of China (English)

    Li Xiaohui; Yu Yong; Li Huirong; Zhang Lin; Jiang Xinyin; Ren Daming

    2008-01-01

    Arctic sea ice in the polar region provides a cold habitat for microbial community.Arctic sea ice microorganisms are revealed to be of considerable importance in basic research and potential in biotechnological application.This paper investigated the culture condition and extracellular hydrolase of 14 strains of different Arctic sea ice bacteria.The results showed that optimal growth temperature of strains is 15 ℃ or 20 ℃.The optimal pH is about 8.0.They hardly grow at acid condition.3% NaCl is necessary for better growth.These strains have different abilities in producing amylase,protease,cellulase and lipase.Pseudoalteronomas sp.Bsi429 and Pseudoalteronomas sp.Bsi539 produced both cellulose,protease and lipase.These results provide a basis for further developing and exploiting the cold adapted marine enzyme resources.

  19. Pollution around Malta's sea

    OpenAIRE

    Formosa, Nicolette; Duca, Edward

    2014-01-01

    Marine littering is a global concern and every single year tons of litter end up in the ocean all around the globe. It has become such a problem that the waste has amalgamated into huge ‘islands’ floating in the world’s oceans. http://www.um.edu.mt/think/pollution-around-maltas-sea/

  20. Wadden Sea Mud

    DEFF Research Database (Denmark)

    Møller-Jensen, P.

    The present thesis deals with the transport phenomena of estuarine cohesive sediment from a laboratory and a numerical point of view. The cohesive sediment used throughout the whole process was natural mud from the Danish part of the Wadden sea, Ho Bay. In the laboratory, the work was concentrated...

  1. Sailing the Cyber Sea

    Science.gov (United States)

    2012-04-01

    years, the Internet 4 years, and the iPod 3 years, while Facebook added 200 million users in less than 1 year. And finally, if Facebook were a... Apple ] gets an iPhone. It’s not an acceptable trade.” New Thinking In the context of security, unleashing the power of the Cyber Sea has changed

  2. Wadden Sea Mud

    DEFF Research Database (Denmark)

    Møller-Jensen, P.

    The present thesis deals with the transport phenomena of estuarine cohesive sediment from a laboratory and a numerical point of view. The cohesive sediment used throughout the whole process was natural mud from the Danish part of the Wadden sea, Ho Bay. In the laboratory, the work was concentrated...

  3. Pollution around Malta's sea

    OpenAIRE

    Formosa, Nicolette

    2014-01-01

    Marine littering is a global concern and every single year tons of litter end up in the ocean all around the globe. It has become such a problem that the waste has amalgamated into huge ‘islands’ floating in the world’s oceans. http://www.um.edu.mt/think/pollution-around-maltas-sea/

  4. Solar Sea Power

    Science.gov (United States)

    Zener, Clarence

    1976-01-01

    In their preoccupation with highly complex new energy systems, scientists and statesmen may be overlooking the possibilities of Ocean Thermal Energy Conversion (OTEC). That is the view of a Carnegie-Mellon University physicist who is in the forefront of solar sea power investigation. (Author/BT)

  5. Baltic Sea: Radionuclides

    DEFF Research Database (Denmark)

    Nielsen, Sven Poul; Lüning, Maria; Ilus, Erkki

    2010-01-01

    The most significant source of anthropogenic radioactivity in the Baltic Sea is fallout from the accident at the Chernobyl nuclear power plant in 1986. The second most important source is global fallout from atmospheric nuclear weapons tests carried out during the late 1950s and early 1960s. Radi...

  6. Solomon's Sea and [Pi

    Science.gov (United States)

    Simoson, Andrew J.

    2009-01-01

    This paper is a whimsical survey of the various explanations which might account for the biblical passage in I Kings 7:23 that describes a round object--a bronze basin called Solomon's Sea--as having diameter ten cubits and circumference thirty cubits. Can the biblical pi be any number other than 3? We offer seven different perspectives on this…

  7. Deep-sea fungi

    Digital Repository Service at National Institute of Oceanography (India)

    Raghukumar, C.; Damare, S.

    The deep-sea environment, despite being rich in mineral nutrients and near-saturation levels of oxygen, because of its darkness is not conducive to photosynthesis, the process that sustains life on earth. If a liigh abundance and diversity of life...

  8. Genome Sequence of Halomonas sp. Strain MCTG39a, a Hydrocarbon-Degrading and Exopolymeric Substance-Producing Bacterium.

    Science.gov (United States)

    Gutierrez, Tony; Whitman, William B; Huntemann, Marcel; Copeland, Alex; Chen, Amy; Kyrpides, Nikos; Markowitz, Victor; Pillay, Manoj; Ivanova, Natalia; Mikhailova, Natalia; Ovchinnikova, Galina; Andersen, Evan; Pati, Amrita; Stamatis, Dimitrios; Reddy, T B K; Ngan, Chew Yee; Chovatia, Mansi; Daum, Chris; Shapiro, Nicole; Cantor, Michael N; Woyke, Tanja

    2015-07-16

    Halomonas sp. strain MCTG39a was isolated from coastal sea surface water based on its ability to utilize n-hexadecane. During growth in marine medium the strain produces an amphiphilic exopolymeric substance (EPS) amended with glucose, which emulsifies a variety of oil hydrocarbon substrates. Here, we present the genome sequence of this strain, which is 4,979,193 bp with 4,614 genes and an average G+C content of 55.0%.

  9. Outdoor mass culture of Spirulina maxima in sea-water

    Energy Technology Data Exchange (ETDEWEB)

    Tredici, M.R.; Papuzzo, T.; Tomaselli, L.

    1986-04-01

    The results of a whole year experiment on the outdoor mass culture of Spirulina maxima strain 4Mx on fertilized sea-water are reported. Carbonate and phosphate precipitation in the seawater media was prevented by maintaining a low concentration of phosphate and by controlling the pH in the range of 8.0-8.3. The mean annual yield of biomass on sea-water plus urea as nitrogen source was 7.35 g(dry weight)m/sup -2/.day/sup -1/, a value slightly lower than that obtained on the standard bicarbonate medium (8.14 g.m/sup -2/.day/sup -1/). On sea-water plus nitrate the yield was only 5.2 g.m/sup -2/.day/sup -1/. The nitrogen content of the biomass was higher in summer and lower in winter. The seasonal effect was more evident when nitrate was the nitrogen source.

  10. Particle tracking in the eastern Irish Sea

    Science.gov (United States)

    Wolf, Judith; Amoudry, Karen; Phillips, Hazel; Brown, Jenny

    2017-04-01

    The unstructured grid finite volume community ocean model (FVCOM) has been applied to the west coast of the UK, in order to examine the circulation and transport in the eastern Irish Sea. Tides, freshwater river discharge and meteorological forcing for the year 2008 were used to force the baroclinic hydrodynamic circulation. The hydrodynamics of the Irish Sea are largely governed by the semidiurnal tide, which has a tidal range reaching 10m at Liverpool is the eastern Irish Sea. Tidal currents reach 1 ms-1 over the majority of the area, which means that much of Irish Sea is vertically well-mixed throughout the year period, with a few areas affected by seasonal stratification, such as the cyclonic gyre in the deep channel off Ireland in the western Irish Sea which experiences thermal stratification in summer. In Liverpool Bay, horizontal density gradients, created through freshwater influence from estuaries along the coastline interact with the strong tidal current to produce a phenomenon known as strain-induced periodic stratification (SIPS). There are water quality concerns due to the tendency to eutrophication, as the area is often exposed to industrial pollution and excess nutrients from effluent waters and rivers. There is also concern about the fate of radioactive materials discharged from the Sellafield nuclear reprocessing plant since 1952. In addition to the present discharges from the site, it has been estimated that it is likely that all of the americium and plutonium and around 10% of the caesium entering the Irish Sea were originally assimilated into deposits of silt and mud sediments; this material may be regarded as a considerable potential source of radionuclides. Determining suspended sediment pathways in this region is important in order to identify potential areas vulnerable to deposition of radioactive material, particularly as radionuclide uptake onto sediments takes place in the offshore 'mud patch' before returning to the coast to be deposited

  11. Occurrence of Plasmids in the Aromatic Degrading Bacterioplankton of the Baltic Sea

    OpenAIRE

    Ain Heinaru; Jaanis Juhanson; Eve Vedler; Eeva Heinaru; Jekaterina Jutkina

    2011-01-01

    Plasmids are mobile genetic elements that provide their hosts with many beneficial traits including in some cases the ability to degrade different aromatic compounds. To fulfill the knowledge gap regarding catabolic plasmids of the Baltic Sea water, a total of 209 biodegrading bacterial strains were isolated and screened for the presence of these mobile genetic elements. We found that both large and small plasmids are common in the cultivable Baltic Sea bacterioplankton and are particularly p...

  12. Well Conductor Strain Monitoring

    Science.gov (United States)

    2014-05-06

    comply with a collection of information if it does not display a currently valid OMB control number. 1. REPORT DATE JUL 2014 2. REPORT TYPE 3. DATES...849,429; filed on June 26, 2013 by the inventor, Dr. Anthony Ruffa and entitled “ SUBSEA WELL CONDUCTOR STRAIN MONITORING”. STATEMENT OF

  13. Active NE-SW Compressional Strain Within the Arabian Plate

    Science.gov (United States)

    Floyd, M. A.; ArRajehi, A.; King, R. W.; McClusky, S.; Reilinger, R. E.; Douad, M.; Sholan, J.; Bou-Rabee, F.

    2012-12-01

    Motion of the Arabian plate with respect to Eurasia has been remarkably steady over more than 25 Myr as revealed by comparison of geodetic and plate tectonic reconstructions (e.g., McQuarrie et al., 2003, GRL; ArRajehi et al., 2010, Tectonics). While internal plate deformation is small in comparison to the rate of Arabia-Eurasia convergence, the improved resolution of GPS observations indicate ~ NE-SW compressional strain that appears to affect much of the plate south of latitude ~ 30°N. Seven ~ NE-SW oriented inter-station baselines all indicated shortening at rates in the range of 0.5-2 mm/yr, for the most part with 1-sigma velocity uncertainties < 0.4 mm/yr. Plate-scale strain rates exceed 2×10-9/yr. The spatial distribution of strain can not be resolved from the sparse available data, but strain appears to extend at least to Riyadh, KSA, ~ 600 km west of the Zagros Fold and Thrust Belt that forms the eastern, collisional boundary of the Arabian plate with Eurasia (Iran). Geodetic velocities in the plate tectonic reference frame for Arabia, derived from magnetic anomalies in the Red Sea (Chu and Gordon, 1998, GJI), show no significant E-W motion for GPS stations located along the Red Sea coast (i.e., geodetic and plate tectonic spreading rates across the Red Sea agree within their resolution), in contrast to sites in the plate interior and along the east side of the plate that indicate east-directed motions. In addition, NE-SW contraction is roughly normal to ~ N-S striking major structural folds in the sedimentary rocks within the Arabian Platform. These relationships suggest that geodetically observed contraction has characterized the plate for at least the past ~ 3 Myr. Broad-scale contraction of the Arabian plate seems intuitively reasonable given that the east and north sides of the plate are dominated by active continental collision (Zagros, E Turkey/Caucasus) while the west and south sides are bordered by mid-ocean ridge spreading (Red Sea and Gulf of

  14. Intraspecific Diversity of Aureobasidium pullulans Strains from Different Marine Environments

    Institute of Scientific and Technical Information of China (English)

    LIU Jia; LIU Zhiqiang; CHI Zhenming; ZHANG Liang; ZHANG Dechao

    2009-01-01

    Totally more than 500 yeast strains were isolated from seawater, sea sediments, mud of sea salterns, marine fish guts and marine algae. The results of routine and molecular biology identification methods show that nine strains among these marine yeasts belong to Aureobasidium pullulans, although the morphologies of their colonies are very different. The marine yeasts isolated from different marine environments indicate that A. pullulans is widely distributed in different environmental conditions. These Aureobasidium pullulans strains include A. pullulans 4#2, A. pullulans N13d, A. pullulans HN3-11, A. pullulans HN2-3, A. pullulans JHSc,A. pullulans HN4.7, A. pullulans HN5.3, A. pullulans HN6.2 and A. pullulans W13a. A. pullulans 4#2 could produce cellulase and single cell protein. A. pullulans N13d could produce protease, lipase, amylase and cellulase. Both A. pullulans HN3-11 and A. pullulans HN2-3 were able to produce protease, lipase and cellulase. A. pullulans JHSc could secrete cellulase and killer toxin. Both A.pullulans HN4.7 and A. pullulans HN5.3 could yield lipase and cellulase. A. pullulans W13a was able to secrete extracellular amylase and cellulase while A. pullulans HN4.7 and A. pullulans N13d could produce siderophores. This means that different A. pullulans strains from different marine environments have different physiological characteristics, which may be applied in many different biotechnological industries.

  15. Intraspecific diversity of Aureobasidium pullulans strains from different marine environments

    Science.gov (United States)

    Liu, Jia; Liu, Zhiqiang; Chi, Zhenming; Zhang, Liang; Zhang, Dechao

    2009-09-01

    Totally more than 500 yeast strains were isolated from seawater, sea sediments, mud of sea salterns, marine fish guts and marine algae. The results of routine and molecular biology identification methods show that nine strains among these marine yeasts belong to Aureobasidium pullulans, although the morphologies of their colonies are very different. The marine yeasts isolated from different marine environments indicate that A. pullulans is widely distributed in different environmental conditions. These Aureobasidium pullulans strains include A. pullulans 4#2, A. pullulans N13d, A. pullulans HN3-11, A. pullulans HN2-3, A. pullulans JHSc, A. pullulans HN4.7, A. pullulans HN5.3, A. pullulans HN6.2 and A. pullulans W13a. A. pullulans 4#2 could produce cellulase and single cell protein. A. pullulans N13d could produce protease, lipase, amylase and cellulase. Both A. pullulans HN3-11 and A. pullulans HN2-3 were able to produce protease, lipase and cellulase. A. pullulans JHSc could secrete cellulase and killer toxin. Both A. pullulans HN4.7 and A. pullulans HN5.3 could yield lipase and cellulase. A. pullulans W13a was able to secrete extracellular amylase and cellulase while A. pullulans HN4.7 and A. pullulans N13d could produce siderophores. This means that different A. pullulans strains from different marine environments have different physiological characteristics, which may be applied in many different biotechnological industries.

  16. Diversity of Vibrio navarrensis Revealed by Genomic Comparison: Veterinary Isolates Are Related to Strains Associated with Human Illness and Sewage Isolates While Seawater Strains Are More Distant

    Directory of Open Access Journals (Sweden)

    Keike Schwartz

    2017-09-01

    Full Text Available Strains of Vibrio navarrensis are present in aquatic environments like seawater, rivers, and sewage. Recently, strains of this species were identified in human clinical specimens. In this study, V. navarrensis strains isolated from livestock in Germany were characterized that were found in aborted fetuses and/or placentas after miscarriages. The veterinary strains were analyzed using phenotypical and genotypical methods and compared to isolates from marine environments of the Baltic Sea and North Sea. The investigated phenotypical traits were similar in all German strains. Whole genome sequencing (WGS was used to evaluate a phylogenetic relationship by performing a single nucleotide polymorphism (SNP analysis. For the SNP analysis, WGS data of two American human pathogenic strains and two Spanish environmental isolates from sewage were included. A phylogenetic analysis of concatenated sequences of five protein-coding housekeeping genes (gyrB, pyrH, recA, atpA, and rpoB, was additionally performed. Both phylogenetic analyses reveal a greater distance of the environmental seawater strains to the other strains. The phylogenetic tree constructed from concatenated sequences of housekeeping genes places veterinary, human pathogenic and Spanish sewage strains into one cluster. Presence and absence of virulence-associated genes were investigated based on WGS data and confirmed by PCR. However, this analysis showed no clear pattern for the potentially pathogenic strains. The detection of V. navarrensis in human clinical specimens strongly suggests that this species should be regarded as a potential human pathogen. The identification of V. navarrensis strains in domestic animals implicates a zoonotic potential of this species. This could indicate a potential threat for humans, as according to the “One Health” concept, human, animal, and environmental health are linked. Future studies are necessary to search for reservoirs of these bacteria in the

  17. Draft Genome Sequence of Thalassospira xiamenensis Strain MCCC 1A03042T

    Science.gov (United States)

    Li, Meiqing; Yang, Shuo; Lai, Qiliang

    2017-01-01

    ABSTRACT Thalassospira xiamenensis strain MCCC 1A03042T was isolated from deep-sea sediment of the Indian Ocean, and it was characterized with heavy-metal arsenic tolerance. Here, we present the draft genome of strain MCCC 1A03042T, which contains 4,786,207 bp with a G+C content of 52.6% and 4,359 protein-coding genes. PMID:28254975

  18. The North Sea - A shelf sea in the Anthropocene

    Science.gov (United States)

    Emeis, Kay-Christian; van Beusekom, Justus; Callies, Ulrich; Ebinghaus, Ralf; Kannen, Andreas; Kraus, Gerd; Kröncke, Ingrid; Lenhart, Hermann; Lorkowski, Ina; Matthias, Volker; Möllmann, Christian; Pätsch, Johannes; Scharfe, Mirco; Thomas, Helmuth; Weisse, Ralf; Zorita, Eduardo

    2015-01-01

    Global and regional change clearly affects the structure and functioning of ecosystems in shelf seas. However, complex interactions within the shelf seas hinder the identification and unambiguous attribution of observed changes to drivers. These include variability in the climate system, in ocean dynamics, in biogeochemistry, and in shelf sea resource exploitation in the widest sense by societies. Observational time series are commonly too short, and resolution, integration time, and complexity of models are often insufficient to unravel natural variability from anthropogenic perturbation. The North Sea is a shelf sea of the North Atlantic and is impacted by virtually all global and regional developments. Natural variability (from interannual to multidecadal time scales) as response to forcing in the North Atlantic is overlain by global trends (sea level, temperature, acidification) and alternating phases of direct human impacts and attempts to remedy those. Human intervention started some 1000 years ago (diking and associated loss of wetlands), expanded to near-coastal parts in the industrial revolution of the mid-19th century (river management, waste disposal in rivers), and greatly accelerated in the mid-1950s (eutrophication, pollution, fisheries). The North Sea is now a heavily regulated shelf sea, yet societal goals (good environmental status versus increased uses), demands for benefits and policies diverge increasingly. Likely, the southern North Sea will be re-zoned as riparian countries dedicate increasing sea space for offshore wind energy generation - with uncertain consequences for the system's environmental status. We review available observational and model data (predominantly from the southeastern North Sea region) to identify and describe effects of natural variability, of secular changes, and of human impacts on the North Sea ecosystem, and outline developments in the next decades in response to environmental legislation, and in response to

  19. Strains in General Relativity

    CERN Document Server

    Bini, Donato; Geralico, Andrea

    2014-01-01

    The definition of relative accelerations and strains among a set of comoving particles is studied in connection with the geometric properties of the frame adapted to a "fiducial observer." We find that a relativistically complete and correct definition of strains must take into account the transport law of the chosen spatial triad along the observer's congruence. We use special congruences of (accelerated) test particles in some familiar spacetimes to elucidate such a point. The celebrated idea of Szekeres' compass of inertia, arising when studying geodesic deviation among a set of free-falling particles, is here generalized to the case of accelerated particles. In doing so we have naturally contributed to the theory of relativistic gravity gradiometer. Moreover, our analysis was made in an observer-dependent form, a fact that would be very useful when thinking about general relativistic tests on space stations orbiting compact objects like black holes and also in other interesting gravitational situations.

  20. SEA/WOMAN

    OpenAIRE

    Furse, Anna F. D.

    2011-01-01

    A new laboratory research performance by Anna Furse, Athletes of the Heart, UK) in collaboration with Maja Mitic (DAH Teatar, Serbia) and Antonella Diana (Teatret OM, Denmark) based on Henrik Ibsen's 'The lady from the sea' (1888). The project is an AHRC/ACE funded project as part of the Pinter Centre for Performance and Creative Writing's Fractured Narratives project. It has been touring in the UK and to Beirut, Lebanon.

  1. SEA/WOMAN

    OpenAIRE

    Furse, Anna F. D.

    2011-01-01

    A new laboratory research performance by Anna Furse, Athletes of the Heart, UK) in collaboration with Maja Mitic (DAH Teatar, Serbia) and Antonella Diana (Teatret OM, Denmark) based on Henrik Ibsen's 'The lady from the sea' (1888).\\ud \\ud The project is an AHRC/ACE funded project as part of the Pinter Centre for Performance and Creative Writing's Fractured Narratives project. It has been touring in the UK and to Beirut, Lebanon.

  2. Sea Basing Logistiek

    Science.gov (United States)

    2007-11-01

    iets wat nu voor zware goederen niet mogeljk is met de middelen binnen de Nederlandse krijgsmachit. Nederland heeft bijvoorbeeld (nog) geen specifieke...weer gevechtsklaar zijn. Nederlandse troepen voeren de reconstitute fase in het algemeen uit in Nederland . [Kang&Gue] A special concern in sea based...besluit Nederland zelf in te grijpen. De Nederlandse vredesmissie bevindt zich nabij de kust. maar ver van de grens met buurlanden. De operatie kan niet

  3. Armada puts to sea

    Energy Technology Data Exchange (ETDEWEB)

    Esau, I.

    1995-04-01

    This article describes the operational success of British Gas in exploiting the Armada gas field. Armada consists of three separate reservoirs (Fleming, Drake and Hawkins) and lies in the central North Sea. British Gas has successfully exploited this field on behalf of a group of co-venturers. This article describes the economic, technical and political difficulties faced by the company in operating this innovative method of management. (UK)

  4. Dead Sea rhodopsins revisited.

    Science.gov (United States)

    Bodaker, Idan; Suzuki, Marcelino T; Oren, Aharon; Béjà, Oded

    2012-12-01

    The Dead Sea is a unique hypersaline ecosystem with near toxic magnesium levels (∼2 M), dominance of divalent cations and a slightly acidic pH. Previously, we reported a haloarchaeon related to Halobacterium salinarum to dominate in a microbial bloom that developed in 1992 in the upper water layers of the lake following massive freshwater runoff. Whether this clade also dominated an earlier bloom in 1980-1982 cannot be ascertained as no samples for cultivation-independent analysis were preserved. The presence of the light-driven proton pump bacteriorhodopsin was reported in the 1980-1982 bloom of prokaryotes that had developed in the Dead Sea. To test the hypothesis that bacteriorhodopsin proton pumping may play a major role in determining what type of haloarchaea may dominate in specific bloom conditions, we compared rhodopsin genes recovered from Dead Sea biomass collected in different periods with genes coding for retinal proteins in isolated haloarchaea. Novel bacteriorhodopsin and sensory rhodopsin genes were found in samples collected in 2007 and 2010. The fact that no rhodopsin genes were recovered from samples collected during the 1992 bloom, which was dominated by a single species, suggests that different clades were present in the 1980-1982 and 1992 blooms, and that bacteriorhodopsin proton pumping did not necessarily play a determinative role in the dominance of specific halophiles in the blooms.

  5. What Are Sprains and Strains?

    Science.gov (United States)

    ... hands and arms a lot. Examples are gymnastics, tennis, rowing, and golf. People who play these sports sometimes strain their hand or arm. Elbow strains can also happen when playing sports. What ...

  6. Strain measurement based battery testing

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Jeff Qiang; Steiber, Joe; Wall, Craig M.; Smith, Robert; Ng, Cheuk

    2017-05-23

    A method and system for strain-based estimation of the state of health of a battery, from an initial state to an aged state, is provided. A strain gauge is applied to the battery. A first strain measurement is performed on the battery, using the strain gauge, at a selected charge capacity of the battery and at the initial state of the battery. A second strain measurement is performed on the battery, using the strain gauge, at the selected charge capacity of the battery and at the aged state of the battery. The capacity degradation of the battery is estimated as the difference between the first and second strain measurements divided by the first strain measurement.

  7. Legal Status Of The Caspian Sea: History And Present

    Directory of Open Access Journals (Sweden)

    Ardak Kapyshev

    2012-09-01

    Full Text Available At  the  present  stage  one  of  the  unsolved   problems in  interstate relations of  Caspian bordering countries is defining international­legal status of the Caspian Sea. It is noted in the article that this problem is not a new one at all. The history of “division” of the Caspian Sea begins in the ancient age, namely in VIII century. It is underlined that the basic stumbling block  is the position of Iran on the right to use the Caspian Sea, and also occurrence of extra regional players, such as  the USA, China, etc. First of  all, it is connected with rich oil fields and other minerals, and also with convenient geopolitical and geostrategic position. The only way to worry out the international­legal delimitation of the Caspian Sea problem is a negotiating process. By now, despite of  certain disagreements on  legal status of  the Caspian Sea, five Caspian bordering countries managed to achieve certain progress, admitting the possibility of applying the principle of sectorial sectioning on the Caspian Sea.  Clear proof  of  it is the agreements on  division of ground on the northern part of Caspian Sea signed between Kazakhstan, Russia and Azerbaijan. It is important that Kazakhstan, Russia, Azerbaijan and Turkmenistan clearly stated their positions and agreed to make a compromise in their official statements. More than likely, in the near future Iran will soften its position, considering its present  situation and   strained relations with the USA. It has been alleged that the constructive  dialog  already  started; everything depends on  the mobility,  concurrency and rationality of actions of all Caspian bordering countries.

  8. Arctic Sea Ice

    Science.gov (United States)

    Stroeve, J. C.; Fetterer, F.; Knowles, K.; Meier, W.; Serreze, M.; Arbetter, T.

    2004-12-01

    Of all the recent observed changes in the Arctic environment, the reduction of sea ice cover stands out most prominantly. Several independent analysis have established a trend in Arctic ice extent of -3% per decade from the late 1970s to the late 1990s, with a more pronounced trend in summer. The overall downward trend in ice cover is characterized by strong interannual variability, with a low September ice extent in one year typically followed by recovery the next September. Having two extreme minimum years, such as what was observed in 2002 and 2003 is unusual. 2004 marks the third year in a row of substantially below normal sea ice cover in the Arctic. Early summer 2004 appeared unusual in terms of ice extent, with May a record low for the satellite period (1979-present) and June also exhibiting below normal ice extent. August 2004 extent is below that of 2003 and large reductions in ice cover are observed once again off the coasts of Siberia and Alaska and the Greenland Sea. Neither the 2002 or 2003 anomaly appeared to be strongly linked to the positive phase of the Arctic Oscillation (AO) during the preceding winter. Similarly, the AO was negative during winter 2003/2004. In the previous AO framework of Rigor et al (2002), a positive winter AO implied preconditioning of the ice cover to extensive summer decay. In this hypothesis, the AO does not explain all aspects of the recent decline in Arctic ice cover, such as the extreme minima of 2002, 2003 and 2004. New analysis by Rigor and Wallace (2004) suggest that the very positive AO state from 1989-1995 can explain the recent sea ice minima in terms of changes in the Arctic surface wind field associated with the previous high AO state. However, it is also reasonable to expect that a general decrease in ice thickness accompanying warming would manifest itself as greater sensitivity of the ice pack to wind forcings and albedo feedbacks. The decrease in multiyear ice and attendant changes in ice thickness

  9. Force balance and deformation characteristics of anisotropic Arctic sea ice (a high resolution study)

    Science.gov (United States)

    Feltham, D. L.; Heorton, H. D.; Tsamados, M.

    2016-12-01

    The spatial distribution of Arctic sea ice arises from its deformation, driven by external momentum forcing, thermodynamic growth and melt. The deformation of Arctic sea ice is observed to have structural alignment on a broad range of length scales. By considering the alignment of diamond-shaped sea ice floes, an anisotropic rheology (known as the Elastic Anisotropic Plastic, EAP, rheology) has been developed for use in a climate sea ice model. Here we present investigations into the role of anisotropy in determining the internal ice stress gradient and the complete force balance of Arctic sea ice using a state-of-the-art climate sea ice model. Our investigations are focused on the link between external imposed dynamical forcing, predominantly the wind stress, and the emergent properties of sea ice, including its drift speed and thickness distribution. We analyse the characteristics of deformation events for different sea ice states and anisotropic alignment over different regions of the Arctic Ocean. We present the full seasonal stress balance and sea ice state over the Arctic ocean. We have performed 10 km basin-scale simulations over a 30-year time scale, and 2 km and 500 m resolution simulations in an idealised configuration. The anisotropic EAP sea ice rheology gives higher shear stresses than the more customary isotropic EVP rheology, and these reduce ice drift speed and mechanical thickening, particularly important in the Archipelago. In the central Arctic the circulation of sea ice is reduced allowing it to grow thicker thermodynamically. The emergent stress-strain rate correlations from the EAP model suggest that it is possible to characterise the internal ice stresses of Arctic sea ice from observable basin-wide deformation and drift patterns.

  10. Highly variable Pliocene sea surface conditions in the Norwegian Sea

    Science.gov (United States)

    Bachem, Paul E.; Risebrobakken, Bjørg; De Schepper, Stijn; McClymont, Erin L.

    2017-09-01

    The Pliocene was a time of global warmth with small sporadic glaciations, which transitioned towards the larger-scale Pleistocene glacial-interglacial variability. Here, we present high-resolution records of sea surface temperature (SST) and ice-rafted debris (IRD) in the Norwegian Sea from 5.32 to 3.14 Ma, providing evidence that the Pliocene surface conditions of the Norwegian Sea underwent a series of transitions in response to orbital forcing and gateway changes. Average SSTs are 2 °C above the regional Holocene mean, with notable variability on millennial to orbital timescales. Both gradual changes and threshold effects are proposed for the progression of regional climate towards the Late Pliocene intensification of Northern Hemisphere glaciation. Cooling from 4.5 to 4.3 Ma may be linked to the onset of poleward flow through the Bering Strait. This cooling was further intensified by a period of cool summers due to weak obliquity forcing. A 7 °C warming of the Norwegian Sea at 4.0 Ma suggests a major increase in northward heat transport from the North Atlantic, leading to an enhanced zonal SST gradient in the Nordic Seas, which may be linked to the expansion of sea ice in the Arctic and Nordic Seas. A warm Norwegian Sea and enhanced zonal temperature gradient between 4.0 and 3.6 Ma may have been a priming factor for increased glaciation around the Nordic Seas due to enhanced evaporation and precipitation at high northern latitudes.

  11. The Distribution of 18 Enterotoxin and Enterotoxin-Like Genes in Staphylococcus aureus Strains from Different Sources in East China.

    Science.gov (United States)

    Cheng, Jinghua; Wang, Yan; Cao, Yongzhong; Yan, Wenguang; Niu, Xiaosai; Zhou, Liping; Chen, Jianhao; Sun, Ying; Li, Chenxi; Zhang, Xiaorong; Wu, Yantao

    2016-04-01

    The distribution of 18 staphylococcal enterotoxin (SE) or SE-like (SEl) genes in Staphylococcus aureus strains from different sources in east China was investigated. Among all 496 S. aureus strains, 291 strains carried one or more SE genes. The more frequently occurred genes were sea, seb, seg, selk, sell, selm, selo, and seq; the less frequent occurred genes were sec, selj, and ser. The classic SE genes and the enterotoxin gene cluster (egc) (seg, sei, selm, seln, selo, and/or selu) accounted for 25.67% and 61.68% of all detected genes, respectively. There were three gene clusters (egc, sea-sek-seq, and sed-sej-ser), of which the egc cluster was the important one that could generate novel complexes, and the sea-sek-seq cluster was a close relative to the hospital-acquired methicillin-resistant S. aureus. The SE gene distributions were different among strains of different sources and formed diverse toxin gene profiles. The human- and foodborne-origin strains harbored classic and novel SE and SEl genes, whereas animal-origin strains harbored egc and other novel SE and SEl genes mainly. The foodborne- and human-origin strains were the main dangerous factors of classic staphylococcal foodborne poisoning, whereas the strains (especially from animals) that carried egc and other novel genes mainly should be new potential dangerous factors for food safety.

  12. Tessaracoccus arenae sp. nov., isolated from sea sand.

    Science.gov (United States)

    Thongphrom, Chutimon; Kim, Jong-Hwa; Bora, Nagamani; Kim, Wonyong

    2017-06-01

    A Gram-stain positive, non-spore-forming, non-motile, facultatively anaerobic bacterial strain, designated CAU 1319T, was isolated from sea sand and the strain's taxonomic position was investigated using a polyphasic approach. Strain CAU 1319T grew optimally at 30 °C and at pH 7.5 in the presence of 2 % (w/v) NaCl. Phylogenetic analysis, based on the 16S rRNA gene sequence, revealed that strain CAU 1319T belongs to the genus Tessaracoccus, and is closely related to Tessaracoccus lapidicaptus IPBSL-7T (similarity 97.69 %), Tessaracoccus bendigoensis Ben 106T (similarity 95.64 %) and Tessaracoccus flavescens SST-39T (similarity 95.84 %). Strain CAU 1319T had ll-diaminopimelic acid as the diagnostic diamino acid in the cell-wall peptidoglycan, MK-9 (H4) as the predominant menaquinone, and anteiso-C15 : 0 as the major fatty acid. The polar lipids consisted of phosphatidylglycerol, phosphatidylinositol, two unidentified aminolipids, three unidentified phospholipids and one unidentified glycolipid. Predominant polyamines were spermine and spermidine. The DNA-DNA hybridization value between strain CAU 1319T and T. lapidicaptus IPBSL-7T was 24 %±0.2. The DNA G+C content of the novel strain was 69.5 mol%. On the basis of phenotypic and chemotaxonomic properties, as well as phylogenetic relatedness, strain CAU 1319Tshould be classified as a novel species of the genus Tessaracoccus, for which the name Tessaracoccus arenae sp. nov. is proposed. The type strain is CAU 1319T(=KCTC 39760T=NBRC 111973T).

  13. Phylogenetic analysis of cultivable bacteria isolated from Arctic sea-ice

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Phylogenetic analysis based on 16S rDNA of 8 strains of cultivable bacteria isolated from Arctic sea-ice was studied. The results showed that strain BJ1 belonged to genus Planococcus, which was a genus of low mole percent G+C gram-positive bacteria; strain BJ6 belonged to genus Burkholderia of β- proteobacteria and the rest 6 strain all belonged to γ-proteobacteria, of which strain BJ8 was a species of Pseudoalteromonas, strain BJ2-BJ5 and BJ7 were members of genus Psychrobacter. Phylogenetic analysis also indicated that bacteria of genus Psychrobacter of the isolates formed a relatively independent phylogenetic cluster in comparison with other bacteria belonged to genus Psychrobacter.

  14. Bioprospecting of Novel and Bioactive Compounds from Marine Actinomycetes Isolated from South China Sea Sediments.

    Science.gov (United States)

    Yang, Na; Song, Fuhang

    2017-09-16

    Marine actinomycetes are less investigated compared to terrestrial strains as potential sources of natural products. To date, few investigations have been performed on culturable actinomycetes associated with South China Sea sediments. In the present study, twenty-eight actinomycetes were recovered from South China Sea sediments after dereplication by traditional culture-dependent method. The 16S rRNA gene sequences analyses revealed that these strains related to five families and seven genera. Twelve representative strains possessed at least one of the biosynthetic genes coding for polyketide synthase I, II, and nonribosomal peptide synthetase. Four strains had anti-Mycobacterium phlei activities and five strains had activities against methicillin-resistant Staphylococcus aureus. 10 L-scale fermentation of strains Salinispora sp. NHF45, Nocardiopsis sp. NHF48, and Streptomyces sp. NHF86 were carried out for novel and bioactive compounds discovery. Finally, we obtained a novel α-pyrone compound from marine Nocardiopsis sp. NHF48, an analogue of paulomenol from marine Streptomyces sp. NHF86 and a new source of rifamycin B, produced by Salinispora sp. NHF45. The present study concluded that marine actinomycetes, which we isolated from South China Sea sediments, will be a suitable source for the development of novel and bioactive compounds.

  15. Involvement of the cell-specific pigment genes pks and sult in bacterial defense response of sea urchins Strongylocentrotus intermedius.

    Science.gov (United States)

    Kiselev, Konstantin V; Ageenko, Natalya V; Kurilenko, Valeria V

    2013-03-26

    Bacterial infections are one of the most important problems in mass aquaculture, causing the loss of millions of juvenile organisms. We isolated 22 bacterial strains from the cavity fluid of the sea urchin Strongylocentrotus pallidus and used phylogenetic analysis based on 16S rRNA gene sequences to separate the bacterial strains into 9 genera (Aliivibrio, Bizionia, Colwellia, Olleya, Paenibacillus, Photobacterium, Pseudoalteromonas, Shewanella, and Vibrio). Incubating Strongylocentrotus intermedius larvae with a strain from each of the 9 bacterial genera, we investigated the viability of the larvae, the amount of pigment cells, and the level of polyketide synthase (pks) and sulfotransferase (sult) gene expression. Results of the assay on sea urchin development showed that all bacterial strains, except Pseudoalteromonas and Bizionia, suppressed sea urchin development (resulting in retardation of the embryos' development with cellular disorders) and reduced cell viability. We found that pks expression in the sea urchin larvae after incubation with the bacteria of 9 tested genera was significantly increased, while the sult expression was increased only after the treatment with Pseudoalteromonas and Shewanella. Shikimic acid, which is known to activate the biosynthesis of naphthoquinone pigments, increased the tolerance of the sea urchin embryos to the bacteria. In conclusion, we show that the cell-specific pigment genes pks and sult are involved in the bacterial defense response of sea urchins.

  16. Bindin from a sea star

    OpenAIRE

    Patiño, Susana; Jan E. Aagaard; MacCoss, Michael J.; Swanson, Willie J.; Hart, Michael W

    2009-01-01

    The genetic basis for the evolution of development includes genes that encode proteins expressed on the surfaces of sperm and eggs. Previous studies of the sperm acrosomal protein bindin have helped to characterize the adaptive evolution of gamete compatibility and speciation in sea urchins. The absence of evidence for bindin expression in taxa other than the Echinoidea has limited such studies to sea urchins, and led to the suggestion that bindin might be a sea urchin-specific molecule. Here...

  17. Sea Salt Source Function over the Baltic Sea

    Science.gov (United States)

    Petelski, Tomasz; Makuch, Przemyslaw; Markuszewski, Piotr; Jankowski, Andrzej; Zieliński, Tymon

    2013-04-01

    Studies of production and transport of aerosol over the sea are very important for many areas of knowledge. Marine aerosol emitted from the sea surface helps to clean the boundary layer from other aerosol particles. The emitted droplets do not dry out in the highly humid surface layer air and because of their sizes most of them are deposited quickly at the sea surface. Therefore, marine aerosol has many features of rain i.e. the deposition in the marine boundary layer in high wind events is controlled not only by the "dry" processes but also by the "wet" scavenging. While many cruises conducted on board S/Y Oceania, we collected many data which were used to calculate sea salt source function over the Baltic Sea. Our cruises held between 2009 and 2012. Measurements were carried out using gradient method. For this method we used Laser Particle Counter (PMS model CSASP-100_HV) placed on one oft the mast of S/Y Oceania. Measurements were performed on five different levels around sea level: 8, 11, 14, 17 and 20 meters. Based on the averaged vertical concentration, profiles were calculated, using Monin-Obuchow theory, vertical sea spray fluxes in the near water layer. Based on fluxes calculated from vertical concentration profiles was calculated sea salt source function over the Baltic Sea. This function gives emission for different particle size, depending on environmental parameters. Emission of sea spray depends of the size of energy lost by the wind waves in process of collapse. Acknowledgements: The support for this study was provided by the project Satellite Monitoring of the Baltic Sea Environment - SatBałtyk founded by European Union through European Regional Development Fund contract No. POIG 01.01.02-22-011/09.

  18. Experiencing the Full Research Process at Sea Education Association (SEA)

    Science.gov (United States)

    Harris, S. E.; Joyce, P.; Jaroslow, G.; Graziano, L.; Lea, C.; Witting, J.; Bower, A.

    2003-12-01

    While some undergraduate research experiences include only a small piece of the research process, students attending Sea Education Association's SEA Semester complete all aspects of oceanographic research in an intensive 12 week program that earns a full semester's credit. In the first half of the program, students read and discuss background literature on a subject, ask questions, pose hypotheses, and develop a written research proposal, which they defend orally. The second half of the course takes place at sea on one of SEA's state-of-the-art oceanographic research vessels where students carry out their sampling plans, analyze samples and data, write a final paper and present their results before the vessel reaches port, completing the course. At sea, students participate in sample collection and analysis for all student projects in addition to learning the general oceanography along their cruise track. This structure exposes students to the realities of research from start to finish and allows them to take full ownership of their projects. In addition to honing writing, public speaking, and problem-solving skills, students learn that research requires dedication, flexibility, and creativity, particularly when their results are unexpected or negate their hypothesis. SEA's undergraduate research program has been developing since 1971. Over that time, SEA has collected an extensive historical oceanographic database in the western Atlantic and Caribbean, plus Pacific data since 2001. This database is available to both students and outside research scientists. Collaborations with scientists outside SEA enhance the student experience and help facilitate oceanographic research by providing "ship-of-opportunity" sampling in remote locations. SEA Semester provides an excellent model for undergraduate research experiences with over 5000 alumni, about 30% of whom enter graduate school. About half the students in SEA's undergraduate programs are non-science majors. Although

  19. A strain gauge

    DEFF Research Database (Denmark)

    2017-01-01

    The invention relates to a strain gauge of a carrier layer and a meandering measurement grid (101) positioned on the carrier layer, wherein the measurement grid comprises a number of measurement grid sections placed side by side with gaps in between, and a number of end loops (106) interconnecting...... the measurement grid sections at their ends. The end loops at both ends of the measurement grid extend a length (L, 500) in the axial direction in millimetres of a factor times a ratio between a width of a grid section and the gap distance, wherein the factor is larger or equal to 1.5. The invention further...

  20. Sea-Ice Deformation in a Coupled Ocean-Sea Ice Model and in Satellite Remote Sensing Data

    Science.gov (United States)

    Spreen, G.; Kwok, R.; Menemenlis, D.; Nguyen, A. T.

    2016-12-01

    A realistic representation of sea-ice deformation in models is important for accurate simulation of the sea ice mass balance. Simulated sea-ice deformation strain rates from model simulations with 4.5, 9, and 18-km horizontal grid spacing are compared with Synthetic Aperture Radar (SAR) satellite observations (RGPS). The used MITgcm model employs a viscous-plastic sea ice rheology. The figure below shows the ice thickness distributions for the three simulations on 15 November 1999. More ice fracturing and leads are visible in the 4.5 km solution. All three simulations can reproduce the large-scale ice deformation patterns, but small-scale sea-ice deformations and linear kinematic features are not adequately reproduced. The mean sea-ice total deformation rate is about 50% lower in all model solutions than in the satellite observations, especially in the seasonal sea ice zone. A decrease in model grid spacing, however, produces a higher density and more localized ice deformation features. The spatial scaling and probability density functions of all three model solutions follow a power-law similar to the RGPS observations, and contrary to what is found in other studies. Overall, the 4.5-km simulation produces the lowest misfits in divergence, vorticity, and shear when compared with RGPS data. Model sensitivity experiments show a strong impact of the ice strength parametrization on the Arctic Basin sea ice volume, which increased by 7% and 35% for a decrease in ice strength of, respectively, 30% and 70%, after 8 years of model integration. This volume increase is caused by a combination of dynamic and thermodynamic processes: the ice thickness increased by enhanced deformation and ice growth in leads, which is followed by a decrease in ice export. The balance of these processes leads to a new equilibrium Arctic Basin ice volume. Not addressed in this study is whether the differences between simulated and observed deformation rates are an intrinsic limitation of the

  1. Waves in the seas

    Digital Repository Service at National Institute of Oceanography (India)

    Varkey, M.J.

    or change. If ini- tially, only a thin layer of air close to the water surface matters in the mo- mentum transfer from wind to water, afterwards with strong winds, a layer of air upto say 15 to 30 metres comes Small sand waves formed on a seashore due... it breaks with a heading wind or on a beach). Consider an open sea of say 1000 square kilometres wherein billions of 'pushes' and 'pulls' happen over tens of hours, causing uncountable number of waves and wave groups of various types moving in different...

  2. Polarimetric signatures of sea ice in the Greenland Sea

    DEFF Research Database (Denmark)

    Skriver, Henning; Pedersen, Leif Toudal

    1995-01-01

    Polarimetric SAR data of sea ice have been acquired by the Danish polarimetric SAR (EMISAR) during a mission at the Greenland Sea in August 1994. Video recordings from a low-altitude acquisition have been used for interpretation of the SAR data. Also, ERS-1 SAR data and NOAA AVHRR-data have been...

  3. NOAA NDBC SOS - sea_floor_depth_below_sea_surface

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The NOAA NDBC SOS server is part of the IOOS DIF SOS Project. The stations in this dataset have sea_floor_depth_below_sea_surface data. Because of the nature of SOS...

  4. Sadovskii vortex in strain

    Science.gov (United States)

    Freilich, Daniel; Llewellyn Smith, Stefan

    2014-11-01

    A Sadovskii vortex is a patch of fluid with uniform vorticity surrounded by a vortex sheet. Using a boundary element type method, we investigate the steady states of this flow in an incompressible, inviscid straining flow. Outside the vortex, the fluid is irrotational. In the limiting case where the entire circulation is due to the vortex patch, this is a patch vortex (Moore & Saffman, Aircraft wake turbulence and its detection 1971). In the other limiting case, where all the circulation is due to the vortex sheet, this is a hollow vortex (Llewellyn Smith and Crowdy, J. Fluid Mech. 691, 2012). This flow has two governing nondimensional parameters, relating the strengths of the straining field, vortex sheet, and patch vorticity. We study the relationship between these two parameters, and examine the shape of the resulting vortices. We also work towards a bifurcation diagram of the steady states of the Sadovskii vortex in an attempt to understand the connection between vortex sheet and vortex patch desingularizations of the point vortex. Support from NSF-CMMI-0970113.

  5. EASE-Grid Sea Ice Age

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides weekly estimates of sea ice age for the Arctic Ocean from remotely sensed sea ice motion and sea ice extent. The ice age data are derived from...

  6. Sea modeling and rendering

    Science.gov (United States)

    Cathala, Thierry; Latger, Jean

    2010-10-01

    More and more defence and civil applications require simulation of marine synthetic environment. Currently, the "Future Anti-Surface-Guided-Weapon" (FASGW) or "anti-navire léger" (ANL) missile needs this kind of modelling. This paper presents a set of technical enhancement of the SE-Workbench that aim at better representing the sea profile and the interaction with targets. The operational scenario variability is a key criterion: the generic geographical area (e.g. Persian Gulf, coast of Somalia,...), the type of situation (e.g. peace keeping, peace enforcement, anti-piracy, drug interdiction,...)., the objectives (political, strategic, or military objectives), the description of the mission(s) (e.g. antipiracy) and operation(s) (e.g. surveillance and reconnaissance, escort, convoying) to achieve the objectives, the type of environment (Weather, Time of day, Geography [coastlines, islands, hills/mountains]). The paper insists on several points such as the dual rendering using either ray tracing [and the GP GPU optimization] or rasterization [and GPU shaders optimization], the modelling of sea-surface based on hypertextures and shaders, the wakes modelling, the buoyancy models for targets, the interaction of coast and littoral, the dielectric infrared modelling of water material.

  7. Modelling sea ice dynamics

    Science.gov (United States)

    Murawski, Jens; Kleine, Eckhard

    2017-04-01

    Sea ice remains one of the frontiers of ocean modelling and is of vital importance for the correct forecasts of the northern oceans. At large scale, it is commonly considered a continuous medium whose dynamics is modelled in terms of continuum mechanics. Its specifics are a matter of constitutive behaviour which may be characterised as rigid-plastic. The new developed sea ice dynamic module bases on general principles and follows a systematic approach to the problem. Both drift field and stress field are modelled by a variational property. Rigidity is treated by Lagrangian relaxation. Thus one is led to a sensible numerical method. Modelling fast ice remains to be a challenge. It is understood that ridging and the formation of grounded ice keels plays a role in the process. The ice dynamic model includes a parameterisation of the stress associated with grounded ice keels. Shear against the grounded bottom contact might lead to plastic deformation and the loss of integrity. The numerical scheme involves a potentially large system of linear equations which is solved by pre-conditioned iteration. The entire algorithm consists of several components which result from decomposing the problem. The algorithm has been implemented and tested in practice.

  8. Draft Genome Sequence of the Plant Growth–Promoting Pseudomonas punonensis Strain D1-6 Isolated from the Desert Plant Erodium hirtum in Jordan

    Science.gov (United States)

    Lafi, Feras F.; AlBladi, Maha L.; Salem, Nida M.; Al-Banna, Luma; Alam, Intikhab; Bajic, Vladimir B.

    2017-01-01

    ABSTRACT Pseudomonas punonensis strain D1-6 was isolated from roots of the desert plant Erodium hirtum, near the Dead Sea in Jordan. The genome of strain D1-6 reveals several key plant growth–promoting and herbicide-resistance genes, indicating a possible specialized role for this endophyte. PMID:28082490

  9. Draft Genome Sequence of the Plant Growth–Promoting Pseudomonas punonensis Strain D1-6 Isolated from the Desert Plant Erodium hirtum in Jordan

    KAUST Repository

    Lafi, Feras Fawzi

    2017-01-13

    Pseudomonas punonensis strain D1-6 was isolated from roots of the desert plant Erodium hirtum, near the Dead Sea in Jordan. The genome of strain D1-6 reveals several key plant growth-promoting and herbicide-resistance genes, indicating a possible specialized role for this endophyte.

  10. PHYSIOLOGICAL ECOLOGY OF CLOSTRIDIUM GLYCOLICUM RD-1, AN AEROTOLERANT ACETOGEN ISOLATED FROM SEA GRASS ROOTS

    Science.gov (United States)

    An anaerobic, H2-utilizing bacterium, strain RD-1, was isolated from the highest growth-positive dilution series of a root homogenate prepared from the sea grass Halodule wrightii. Cells of RD-1 were gram-positive, spore-forming, motile rods that were linked by connecting filamen...

  11. PHYSIOLOGICAL ECOLOGY OF CLOSTRIDIUM GLYCOLICUM RD-1, AN AEROTOLERANT ACETOGEN ISOLATED FROM SEA GRASS ROOTS

    Science.gov (United States)

    An anaerobic, H2-utilizing bacterium, strain RD-1, was isolated from the highest growth-positive dilution series of a root homogenate prepared from the sea grass Halodule wrightii. Cells of RD-1 were gram-positive, spore-forming, motile rods that were linked by connecting filamen...

  12. Vibrio galatheae sp. nov., a novel member of the Vibrionaceae family isolated from the Solomon Sea

    DEFF Research Database (Denmark)

    Giubergia, Sonia; Machado, Henrique; Mateiu, Ramona Valentina

    2015-01-01

    Based on genetic, chemotaxonomic and phenotypic characteristics, a novel species belonging to the genus Vibrio is described. The facultative anaerobic strain S2757T was isolated from a mussel collected in the Solomon Sea (Solomon Islands). Phylogenetic analyses based on sequences of 16S r...

  13. Echocardiographic assessment of myocardial strain.

    Science.gov (United States)

    Gorcsan, John; Tanaka, Hidekazu

    2011-09-27

    Echocardiographic strain imaging, also known as deformation imaging, has been developed as a means to objectively quantify regional myocardial function. First introduced as post-processing of tissue Doppler imaging velocity converted to strain and strain rate, strain imaging has more recently also been derived from digital speckle tracking analysis. Strain imaging has been used to gain greater understanding into the pathophysiology of cardiac ischemia and infarction, primary diseases of the myocardium, and the effects of valvular disease on myocardial function, and to advance our understanding of diastolic function. Strain imaging has also been used to quantify abnormalities in the timing of mechanical activation for heart failure patients undergoing cardiac resynchronization pacing therapy. Further advances, such as 3-dimensional speckle tracking strain imaging, have emerged to provide even greater insight. Strain imaging has become established as a robust research tool and has great potential to play many roles in routine clinical practice to advance the care of the cardiovascular patient. This perspective reviews the physiology of myocardial strain, the technical features of strain imaging using tissue Doppler imaging and speckle tracking, their strengths and weaknesses, and the state-of-the-art present and potential future clinical applications.

  14. Colony Dimorphism in Bradyrhizobium Strains

    Science.gov (United States)

    Sylvester-Bradley, Rosemary; Thornton, Philip; Jones, Peter

    1988-01-01

    Ten isolates of Bradyrhizobium spp. which form two colony types were studied; the isolates originated from a range of legume species. The two colony types differed in the amount of gum formed or size or both, depending on the strain. Whole 7-day-old colonies of each type were subcultured to determine the proportion of cells which had changed to the other type. An iterative computerized procedure was used to determine the rate of switching per generation between the two types and to predict proportions reached at equilibrium for each strain. The predicted proportions of the wetter (more gummy) or larger colony type at equilibrium differed significantly between strains, ranging from 0.9999 (strain CIAT 2383) to 0.0216 (strain CIAT 2469), because some strains switched faster from dry to wet (or small to large) and others switched faster from wet to dry (or large to small). Predicted equilibrium was reached after about 140 generations in strain USDA 76. In all but one strain (CIAT 3030) the growth rate of the wetter colony type was greater than or similar to that of the drier type. The mean difference in generation time between the two colony types was 0.37 h. Doubling times calculated for either colony type after 7 days of growth on the agar surface ranged from 6.0 to 7.3 h. The formation of two persistent colony types by one strain (clonal or colony dimorphism) may be a common phenomenon among Bradyrhizobium strains. Images PMID:16347599

  15. SeaPort-e Workshop

    Science.gov (United States)

    2014-08-01

    aquilent.com 22 QUESTIONS?? 23 Back-up 24 Program Evolution Category SeaPort Original (2001 – 2004) SeaPort-Enhanced (2004...Function = Industry User Function External System Interfaces: Create Purchase Request (Navy ERP ) Receive CAR Data (FPDS-NG) Receive Award Documents (EDA) Receive Award Data (SPS)

  16. Her Husband Is at Sea

    Institute of Scientific and Technical Information of China (English)

    1997-01-01

    Out in the sea of China are Chinese offshore oil workers. They battle against wind, waves, loneliness and monotony. Their profession requires not only bravery and endurance from the employees themselves, but also from their spouses. It is because of the wives’support that the husbands can work at sea. This,for women, means double family responsibilities, loneliness, worries and endless waiting.

  17. The Law of the Sea

    Science.gov (United States)

    Levy, Jean-Pierre

    1978-01-01

    Recounts problems related to the law of the sea and suggests that these problems could be dealt with in the classroom in an interdisciplinary manner. Problems include pollution control, fishing rights, development of deep sea mineral deposits, and shore access. (Author/DB)

  18. Plastic in North Sea Fish

    NARCIS (Netherlands)

    Foekema, E.M.; Gruijter, de C.; Mergia, M.T.; Franeker, van J.A.; Murk, A.J.; Koelmans, A.A.

    2013-01-01

    To quantify the occurrence of ingested plastic in fish species caught at different geographical positions in the North Sea, and to test whether the fish condition is affected by ingestion of plastics, 1203 individual fish of seven common North Sea species were investigated: herring, gray gurnard, wh

  19. Sea level and climate variations

    NARCIS (Netherlands)

    Oerlemans, J.

    1985-01-01

    Review paper, ESA Symposium on Application of Satellite Data to Climate Modelling. Alpbach (Austria) Sea level is an essential component of the climate system, on which many human activities in the coastal zone depend. Climate variations leading to changes in relative sea level are

  20. The environmental state at sea

    NARCIS (Netherlands)

    Tatenhove, van J.P.M.

    2016-01-01

    Seas and oceans are confronted with a plethora of environmental problems, caused by land-based activities (agriculture, industries, and ports) and by maritime activities (such as shipping, fishing, oil and gas drilling, tourism, and navigational dredging). Environmental problems at sea challenge the

  1. Sea Level Rise Data Discovery

    Science.gov (United States)

    Quach, N.; Huang, T.; Boening, C.; Gill, K. M.

    2016-12-01

    Research related to sea level rise crosses multiple disciplines from sea ice to land hydrology. The NASA Sea Level Change Portal (SLCP) is a one-stop source for current sea level change information and data, including interactive tools for accessing and viewing regional data, a virtual dashboard of sea level indicators, and ongoing updates through a suite of editorial products that include content articles, graphics, videos, and animations. The architecture behind the SLCP makes it possible to integrate web content and data relevant to sea level change that are archived across various data centers as well as new data generated by sea level change principal investigators. The Extensible Data Gateway Environment (EDGE) is incorporated into the SLCP architecture to provide a unified platform for web content and science data discovery. EDGE is a data integration platform designed to facilitate high-performance geospatial data discovery and access with the ability to support multi-metadata standard specifications. EDGE has the capability to retrieve data from one or more sources and package the resulting sets into a single response to the requestor. With this unified endpoint, the Data Analysis Tool that is available on the SLCP can retrieve dataset and granule level metadata as well as perform geospatial search on the data. This talk focuses on the architecture that makes it possible to seamlessly integrate and enable discovery of disparate data relevant to sea level rise.

  2. Scaling the Baltic Sea environment

    DEFF Research Database (Denmark)

    Larsen, Henrik Gutzon

    2008-01-01

    The Baltic Sea environment has since the early 1970s passed through several phases of spatial objectification in which the ostensibly well-defined semi-enclosed sea has been framed and reframed as a geographical object for intergovernmental environmental politics. Based on a historical analysis...

  3. The Syndrome of Sea Cucumber (Apostichopus japonicus) Infected by Virus and Bacteria

    Institute of Scientific and Technical Information of China (English)

    Huan DENG; Zun-chun ZHOU; Nian-bin WANG; Chang LIU

    2008-01-01

    A outbreak of disease with symptoms of evisceration and skin ulteration led to mass mortality in sea cucumber Apostichopus japonicus cultivated in indoor ponds near the Dalian coast from December 2004 to April 2005. Spherical virus particles with a diameter of 75-200 nm were found in the cytoplasm of cells in the water-system, the alimentary canal and in the respiratory trees of the diseased and dying sea cucumber individuals by electron microscopic observation of ultrathin sections. Examination by negative stained samples revealed that all the diseased sea cucumbers were infected by the virus, while the healthly ones cultivated outside the contagious area were not. Two bacterial strains were also isolated from the diseased animals. When exposed to a medium containing the virus particles, regardless of whether the bacterial suspension was added,healthy sea cucumbers exhibited identical disease symptoms as the ones in the indoor ponds, and had a mortality of 90%-100%. However, when exposed to a medium in which there was only one of the two bacterial strains, 30%-80% of the sea cucumbers were infected and nearly 20% died. Negative staining showed that the viral particles were detected only in the bodies of the tested animals that were exposed to the viral medium. Histopathologically, the diseased sea cucumbers are characterized by karyopycnosis, and disintegration of the endoplasmic reticula and mitochondria in the epithelial cells in the water-system, the respiratory tree and the alimentary canal.

  4. Seasonal patterns in growth, blood consumption, and effects on hosts by parasitic-phase sea lampreys in the Great Lakes: an individual-based model approach

    Science.gov (United States)

    Madenjian, Charles P.; Cochran, Philip A.; Bergstedt, Roger A.

    2003-01-01

    An individual-based model (IBM) was developed for sea lamprey (Petromyzon marinus) populations in the Laurentian Great Lakes. The IBM was then calibrated to observed growth, by season, for sea lampreys in northern Lake Huron under two different water temperature regimes: a regime experienced by Seneca-strain lake trout (Salvelinus namaycush) and a regime experienced by Marquettestrain lake trout. Modeling results indicated that seasonal blood consumption under the Seneca regime was very similar to that under the Marquette regime. Simulated mortality of lake trout directly due to blood removal by sea lampreys occurred at nearly twice the rate during August and September under the Marquette regime than under the Seneca regime. However, cumulative sea lamprey-induced mortality on lake trout over the entire duration of the sea lamprey's parasitic phase was only 7% higher for the Marquette regime compared with the Seneca regime. Thus, these modeling results indicated that the strain composition of the host (lake trout) population was not important in determining total number of lake trout deaths or total blood consumption attributable to the sea lamprey population, given the sea lamprey growth pattern. Regardless of water temperature regime, both blood consumption rate by sea lampreys and rate of sea lamprey-induced mortality on lake trout peaked in late October. Elevated blood consumption in late October appeared to be unrelated to changes in water temperature. The IBM approach should prove useful in optimizing control of sea lampreys in the Laurentian Great Lakes.

  5. Two Streptomyces species producing antibiotic, antitumor, and anti-inflammatory compounds are widespread among intertidal macroalgae and deep-sea coral reef invertebrates from the central Cantabrian Sea.

    Science.gov (United States)

    Braña, Alfredo F; Braña, Afredo F; Fiedler, Hans-Peter; Nava, Herminio; González, Verónica; Sarmiento-Vizcaíno, Aida; Molina, Axayacatl; Acuña, José L; García, Luis A; Blanco, Gloria

    2015-04-01

    Streptomycetes are widely distributed in the marine environment, although only a few studies on their associations to algae and coral ecosystems have been reported. Using a culture-dependent approach, we have isolated antibiotic-active Streptomyces species associated to diverse intertidal marine macroalgae (Phyllum Heterokontophyta, Rhodophyta, and Chlorophyta), from the central Cantabrian Sea. Two strains, with diverse antibiotic and cytotoxic activities, were found to inhabit these coastal environments, being widespread and persistent over a 3-year observation time frame. Based on 16S rRNA sequence analysis, the strains were identified as Streptomyces cyaneofuscatus M-27 and Streptomyces carnosus M-40. Similar isolates to these two strains were also associated to corals and other invertebrates from deep-sea coral reef ecosystem (Phyllum Cnidaria, Echinodermata, Arthropoda, Sipuncula, and Anelida) living up to 4.700-m depth in the submarine Avilés Canyon, thus revealing their barotolerant feature. These two strains were also found to colonize terrestrial lichens and have been repeatedly isolated from precipitations from tropospheric clouds. Compounds with antibiotic and cytotoxic activities produced by these strains were identified by high-performance liquid chromatography (HPLC) and database comparison. Antitumor compounds with antibacterial activities and members of the anthracycline family (daunomycin, cosmomycin B, galtamycin B), antifungals (maltophilins), anti-inflamatory molecules also with antituberculosis properties (lobophorins) were identified in this work. Many other compounds produced by the studied strains still remain unidentified, suggesting that Streptomyces associated to algae and coral ecosystems might represent an underexplored promising source for pharmaceutical drug discovery.

  6. Strain Pattern in Supercooled Liquids

    Science.gov (United States)

    Illing, Bernd; Fritschi, Sebastian; Hajnal, David; Klix, Christian; Keim, Peter; Fuchs, Matthias

    2016-11-01

    Investigations of strain correlations at the glass transition reveal unexpected phenomena. The shear strain fluctuations show an Eshelby-strain pattern [˜cos (4 θ ) /r2 ], characteristic of elastic response, even in liquids, at long times. We address this using a mode-coupling theory for the strain fluctuations in supercooled liquids and data from both video microscopy of a two-dimensional colloidal glass former and simulations of Brownian hard disks. We show that the long-ranged and long-lived strain signatures follow a scaling law valid close to the glass transition. For large enough viscosities, the Eshelby-strain pattern is visible even on time scales longer than the structural relaxation time τ and after the shear modulus has relaxed to zero.

  7. Draft Genome Sequence of the Hydrocarbon-Degrading Bacterium Alcanivorax dieselolei KS-293 Isolated from Surface Seawater in the Eastern Mediterranean Sea

    KAUST Repository

    Barbato, Marta

    2015-12-10

    We report here the draft genome sequence of Alcanivorax dieselolei KS-293, a hydrocarbonoclastic bacterium isolated from the Mediterranean Sea, by supplying diesel oil as the sole carbon source. This strain contains multiple putative genes associated with hydrocarbon degradation pathways and that are highly similar to those described in A. dieselolei type strain B5.

  8. Highly variable Pliocene sea surface conditions in the Norwegian Sea

    Directory of Open Access Journals (Sweden)

    P. E. Bachem

    2017-09-01

    Full Text Available The Pliocene was a time of global warmth with small sporadic glaciations, which transitioned towards the larger-scale Pleistocene glacial–interglacial variability. Here, we present high-resolution records of sea surface temperature (SST and ice-rafted debris (IRD in the Norwegian Sea from 5.32 to 3.14 Ma, providing evidence that the Pliocene surface conditions of the Norwegian Sea underwent a series of transitions in response to orbital forcing and gateway changes. Average SSTs are 2 °C above the regional Holocene mean, with notable variability on millennial to orbital timescales. Both gradual changes and threshold effects are proposed for the progression of regional climate towards the Late Pliocene intensification of Northern Hemisphere glaciation. Cooling from 4.5 to 4.3 Ma may be linked to the onset of poleward flow through the Bering Strait. This cooling was further intensified by a period of cool summers due to weak obliquity forcing. A 7 °C warming of the Norwegian Sea at 4.0 Ma suggests a major increase in northward heat transport from the North Atlantic, leading to an enhanced zonal SST gradient in the Nordic Seas, which may be linked to the expansion of sea ice in the Arctic and Nordic Seas. A warm Norwegian Sea and enhanced zonal temperature gradient between 4.0 and 3.6 Ma may have been a priming factor for increased glaciation around the Nordic Seas due to enhanced evaporation and precipitation at high northern latitudes.

  9. Strain localization along micro-boudinage

    Science.gov (United States)

    Chatziioannou, Eleftheria; Rogowitz, Anna; Grasemann, Bernhard; Habler, Gerlinde; Soukis, Konstantinos; Schneider, David

    2016-04-01

    The progressive development of boudinage strongly depends on the kinematic framework and the mechanical properties of the boudinaged layer and host rock. A common type of boudin, which can often be observed in natural examples, is the domino boudinage. This boudin type typically reflects a strong competency contrast of the interlayered rock sequences. Numerical models have shown that a relatively high amount of strain is necessary in order to develop separated boudin segments. With ongoing deformation and consequent rotation of the individual segments into the shear direction, the terminal sectors tend to experience a higher rotation rate, progressively resulting in isoclinal folding. Whereas most investigations of domino boudinage are cm- to dm-scale examples, we examined one order of magnitude smaller examples, where the deformation mechanism between the segments and the matrix could be directly investigated. The samples are from Kalymnos Island located in the southeastern Aegean Sea (Dodecanese islands-Greece). The analysed sample belongs to the upper unit of the pre-Alpidic basement, which consists of a succession of marbles, which were deformed under lower-greenschist facies conditions during the Variscan orogeny. 40Ar/39Ar geochronological dating on white micas in the adjacent upper quartz-mica schists unit yielded deformation ages between 240 and 334 Ma. The calcitic marble comprises boudinaged dolomite layers with thickness varying between 1 and 20 mm. Progressive deformation of the boudinaged layers resulted in the development of ptygmatic folds with fold axes parallel to the stretching lineation. The grain size from the host rock marbles (10 μm) decreases towards the boudinaged dolomite layer (5 μm) indicating strain localization adjacent to the dolomite layers. Furthermore, strain is localized within micro shear zones which nucleate in the necks of rotated boudin segments. Crystallographic preferred orientations (CPO) derived from electron backscatter

  10. The First Molecular Characterization of Picocyanobacteria from the Argentine Sea

    Directory of Open Access Journals (Sweden)

    Macarena Perez-Cenci

    2014-01-01

    Full Text Available Picocyanobacteria are abundant throughout the world’s oceans. Particularly, it has been reported that Synechococcus strains have a wide latitudinal distribution, from polar to tropical waters. However, their molecular characterization in the Southwest Atlantic Ocean is still missing. We analyzed Synechococcus genetic diversity in a sector of the Argentine Sea, one of the richest biological areas of the world oceans. 16S rRNA amplicons obtained after PCR amplification of environmental DNA extracted from water samples of this area were used for DGGE and sequenced. Only Synechococcus sequences could be retrieved. On the other hand, we isolated two Synechococcus strains from the environment. Our analyses revealed that the clade I group was widespread from latitude 38°S to 48°S and that can coexist with clade IV strains in shelf waters. The cooccurrence of these two clades may be related to an adaptation to high-nutrient/low-temperature waters. Our data are the first report on Synechococcus ecotypes that would be important contributors to phytoplankton biomass in the Argentine Sea, one of the richest biological areas of the world oceans.

  11. Hydrogen production from microbial strains

    Science.gov (United States)

    Harwood, Caroline S; Rey, Federico E

    2012-09-18

    The present invention is directed to a method of screening microbe strains capable of generating hydrogen. This method involves inoculating one or more microbes in a sample containing cell culture medium to form an inoculated culture medium. The inoculated culture medium is then incubated under hydrogen producing conditions. Once incubating causes the inoculated culture medium to produce hydrogen, microbes in the culture medium are identified as candidate microbe strains capable of generating hydrogen. Methods of producing hydrogen using one or more of the microbial strains identified as well as the hydrogen producing strains themselves are also disclosed.

  12. Evaluation of Strain Hardening Parameters

    Institute of Scientific and Technical Information of China (English)

    DING Zong-hai; Pavel Huml; YANG Wei

    2004-01-01

    The plane-strain compression test for three kinds of materials was carried out in a temperature range between room temperature and 400 ℃. The σ - ε curves and strain-hardening rate at different temperatures were simulated and a reasonable fit to the experimental data was obtained. A modified model created by data inference and computer simulation was developed to describe the strain hardening at a large deformation, and the predicted strain hardening are in a good agreement with that observed in a large range of stress. The influences of different parameters on strain hardening behaviour under large deformation were analysed. The temperature increase within the test temperatures for stainless steel 18/8 Ti results in dropping of flow stress and strain-hardening rate. For favourable γ-fibre texture to obtain high r, the cold rolling was applied at large reduction. In the experimental procedure, the X-ray diffraction test was carried out to compare the strain hardening and microstructure under large deformation for a bcc steel (low carbon steel SS-1142). The results indicate that the high strain-hardening rate possibly occurs when the primary slip plane {110} is parallel to the rolling plane and the strain-hardening rate decreases when lots of {110} plane rotate out from the orientation {110}∥RP.

  13. Chartering the high seas

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1997-03-01

    Far from being a standard exercise, the transportation of coal by sea involves different players and procedures depending on the buyers and the sellers own strategy. This article, extracted from a new report by Drewry Shipping Consultants, identifies the strategies of the main players in the seaborne coal trade. In the coking coal market there is a long established preference for direct producer consumer purchase contracts, with the buyer undertaking the trading function, rather than purchasing through third parties. However, trading companies play a more important role in the steam coal market, acting either as principals or agents - or in some cases both. Both steam and coking coal are contracted mainly on a long-term basis. This guarantees supplies form sources which offer the optimum grades of coal for their plant. Diversity of supply is also an issue in case there are problems in obtaining the chosen coal. Shipping practices in Japan, Europe and elsewhere are examined. 2 figs., 3 tabs.

  14. Effects of different microbes on fermenting feed for sea cucumber ( Apostichopus japonicus)

    Science.gov (United States)

    Jiang, Yan; Wang, Yingeng; Mai, Kangsen; Zhang, Zheng; Liao, Meijie; Rong, Xiaojun

    2015-10-01

    The effects of different microbes on fermenting feed for sea cucumber ( Apostichopus japonicus) were compared to select the optimal fermentation strain in this study. Saccharomgces cerevisae, Candida utilis, Bacillus subtilis and Geotrichum candidum were independently added into the experimental compound feed, while only saline was mixed with the control feed. The fermentation treatments were inoculated with 10% seed solution under the condition of 25°C and 70% water content, which lasted for 5 days to elucidate the optimal microbe strain for fermenting effect. Physicochemical indexes and sensorial characteristics were measured per day during the fermentation. The indexes included dry matter recovery (DMR), crude protein (CP), the percentage of amino acid nitrogen to total nitrogen (AA-N/tN), the percentage of ammonia nitrogen to total nitrogen (NH3-N/tN), and the ratio of fermentation strains and vibrios to the total microbes, color, smell and viscosity. The results showed that DMR, CP and AA-N/tN of the S. cerevisae group reached the highest level on day 3, but the ratio of fermentation strain was second to C. utilis group. In addition, its NH3-N/tN and the ratio of vibrios were maintained at low levels, and the sensory evaluation score including smell, color and viscosity was the highest in S. cerevisae group on day 3. Therefore, S. cerevisae could be the optimal strain for the feed fermentation for sea cucumber. This research developed a new production method of fermentation feed for sea cucumber.

  15. Arctic Sea Ice Predictability and the Sea Ice Prediction Network

    Science.gov (United States)

    Wiggins, H. V.; Stroeve, J. C.

    2014-12-01

    Drastic reductions in Arctic sea ice cover have increased the demand for Arctic sea ice predictions by a range of stakeholders, including local communities, resource managers, industry and the public. The science of sea-ice prediction has been challenged to keep up with these developments. Efforts such as the SEARCH Sea Ice Outlook (SIO; http://www.arcus.org/sipn/sea-ice-outlook) and the Sea Ice for Walrus Outlook have provided a forum for the international sea-ice prediction and observing community to explore and compare different approaches. The SIO, originally organized by the Study of Environmental Change (SEARCH), is now managed by the new Sea Ice Prediction Network (SIPN), which is building a collaborative network of scientists and stakeholders to improve arctic sea ice prediction. The SIO synthesizes predictions from a variety of methods, including heuristic and from a statistical and/or dynamical model. In a recent study, SIO data from 2008 to 2013 were analyzed. The analysis revealed that in some years the predictions were very successful, in other years they were not. Years that were anomalous compared to the long-term trend have proven more difficult to predict, regardless of which method was employed. This year, in response to feedback from users and contributors to the SIO, several enhancements have been made to the SIO reports. One is to encourage contributors to provide spatial probability maps of sea ice cover in September and the first day each location becomes ice-free; these are an example of subseasonal to seasonal, local-scale predictions. Another enhancement is a separate analysis of the modeling contributions. In the June 2014 SIO report, 10 of 28 outlooks were produced from models that explicitly simulate sea ice from dynamic-thermodynamic sea ice models. Half of the models included fully-coupled (atmosphere, ice, and ocean) models that additionally employ data assimilation. Both of these subsets (models and coupled models with data

  16. Sea Surface Temperature Climate Data Record for the North Sea and Baltic Sea

    DEFF Research Database (Denmark)

    Høyer, Jacob L.; Karagali, Ioanna

    2016-01-01

    A 30-yr climate data record (CDR) of sea surface temperature (SST) has been produced with daily gap-free analysis fields for the North Sea and the Baltic Sea region from 1982 to 2012 by combining the Pathfinder AVHRR satellite data record with the Along-Track Scanning Radiometer (ATSR) Reprocessing...... observations on average. Validation against independent in situ observations shows a very stable performance of the data record, with a mean difference of -0.06 °C compared to moored buoys and a 0.46 °C standard deviation of the differences. The mean annual biases of the SST CDR are small for all years......, with a negligible temporal trend when compared against drifting and moored buoys. Analysis of the SST CDR reveals that the monthly anomalies for the North Sea, the Danish straits, and the central Baltic Sea regions show a high degree of correlation for interannual and decadal time scales, whereas the monthly...

  17. Strain correction in interleaved strain-encoded (SENC) cardiac MR

    Science.gov (United States)

    Motaal, Abdallah G.; Osman, Nael F.

    2010-03-01

    The strain encoding (SENC) technique directly encodes regional strain of the heart into the acquired MR images and produces two images with two different tunings so that longitudinal strain, on the short-axis view, or circumferential strain on the long-axis view, are measured. Interleaving acquisition is used to shorten the acquisition time of the two tuned images by 50%, but it suffers from errors in the strain calculations due to inter-tunings motion of the heart. In this work, we propose a method to correct for the inter-tunings motion by estimating the motion-induced shift in the spatial frequency of the encoding pattern, which depends on the strain rate. Numerical data was generated to test the proposed method and real images of human subjects were used for validation. The proposed method corrected the measured strain values so they became nearly identical to the original ones. The results show an improvement in strain calculations so as to relax the imaging constraints on spatial and temporal resolutions and improve image quality.

  18. Will the swine strain crowd out the seasonal influenza strain?

    CERN Document Server

    Schinazi, Rinaldo B

    2010-01-01

    We use spatial and non spatial models to argue that competition alone may explain why two influenza strains do not usually coexist. The more virulent strain is likely to crowd out the less virulent one. This can be seen as a consequence of the Exclusion Principle of Ecology. We exhibit, however, a spatial model for which coexistence is possible.

  19. Role of sea ice in air-sea exchange and its relation to sea fog

    Institute of Scientific and Technical Information of China (English)

    解思梅; 包澄澜; 姜德中; 邹斌

    2001-01-01

    Synchronous or quasi-synchronous stereoscopic sea-ice-air comprehensive observation was conducted during the First China Arctic Expedition in summer of 1999. Based on these data, the role of sea ice in sea-air exchange was studied. The study shows that the kinds, distribution and thickness of sea ice and their variation significantly influence the air-sea heat exchange. In floating ice area, the heat momentum transferred from ocean to atmosphere is in form of latent heat; latent heat flux is closely related to floating ice concentration; if floating ice is less, the heat flux would be larger. Latent heat flux is about 21 23.6 W*m-2, which is greater than sensible heat flux. On ice field or giant floating ice, heat momentum transferred from atmosphere to sea ice or snow surface is in form of sensible heat. In the floating ice area or polynya, sea-air exchange is the most active, and also the most sensible for climate. Also this area is the most important condition for the creation of Arctic vapor fog. The heat exchange of a large-scale vapor fog process of about 500000 km2 on Aug. 21 22,1999 was calculated; the heat momentum transferred from ocean to air was about 14.8×109 kW. There are various kinds of sea fog, radiation fog, vapor fog and advection fog, forming in the Arctic Ocean in summer. One important cause is the existence of sea ice and its resultant complexity of both underlying surface and sea-air exchange.

  20. Bacterial and viral pathogens detected in sea turtles stranded along the coast of Tuscany, Italy.

    Science.gov (United States)

    Fichi, G; Cardeti, G; Cersini, A; Mancusi, C; Guarducci, M; Di Guardo, G; Terracciano, G

    2016-03-15

    During 2014, six loggerhead turtles, Caretta caretta and one green turtle, Chelonia mydas, found stranded on the Tuscany coast of Italy, were examined for the presence of specific bacterial and viral agents, along with their role as carriers of fish and human pathogens. Thirteen different species of bacteria, 10 Gram negative and 3 Gram positive, were identified. Among them, two strains of Vibrio parahaemolyticus and one strain of Lactococcus garviae were recovered and confirmed by specific PCR protocols. No trh and tdh genes were detected in V. parahaemolyticus. The first isolation of L. garviae and the first detection of Betanodavirus in sea turtles indicate the possibility for sea turtles to act as carriers of fish pathogens. Furthermore, the isolation of two strains of V. parahaemolyticus highlights the possible role of these animals in human pathogens' diffusion. Copyright © 2016 Elsevier B.V. All rights reserved.

  1. GeoSEA: Geodetic Earthquake Observatory on the Seafloor

    Science.gov (United States)

    Kopp, Heidrun; Lange, Dietrich; Flueh, Ernst R.; Petersen, Florian; Behrmann, Jan-Hinrich; Devey, Colin

    2014-05-01

    Space geodetic observations of crustal deformation have contributed greatly to our understanding of plate tectonic processes in general, and plate subduction in particular. Measurements of interseismic strain have documented the active accumulation of strain, and subsequent strain release during earthquakes. However, techniques such as GPS cannot be applied below the water surface because the electromagnetic energy is strongly attenuated in the water column. Evidence suggests that much of the elastic strain build up and release (and particularly that responsible for both tsunami generation and giant earthquakes) occurs offshore. To quantify strain accumulation and assess the resultant hazard potential we urgently need systems to resolve seafloor crustal deformation. Here we report on first results of sea trials of a newly implemented seafloor geodesy array. The GeoSEA (Geodetic Earthquake Observatory on the Seafloor) array consists of a seafloor transponder network comprising 35 units and a wave glider acting as a surface unit (GeoSURF) to ensure satellite correspondence, data transfer and monitor system health. Seafloor displacement occurs in the horizontal (x,y) and vertical direction (z). The vertical displacement is measured by monitoring pressure variations at the seafloor. Horizontal seafloor displacement can be measured either using an acoustic/GPS combination to provide absolute positioning (requiring a suitably equipped vessel to perform repeated cruises to provide the GPS fixes) or by long-term acoustic telemetry between different beacons fixed on the seafloor to determine relative distances by using the travel time observations to each other, which is the technique tested during our short sea trials. For horizontal direct path measurements, the system utilizes acoustic ranging techniques with a ranging precision better than 15 mm and long term stability over 2 km distances. Vertical motion is obtained from pressure gauges. Integrated inclinometers

  2. Burial stress and elastic strain of carbonate rocks

    DEFF Research Database (Denmark)

    Fabricius, Ida Lykke

    2014-01-01

    mechanisms. The principle is illustrated by comparing carbonate sediments and sedimentary rocks from the North Sea Basin and three oceanic settings: a relatively shallow water setting dominated by coarse carbonate packstones and grainstones and two deep water settings dominated by fine‐grained carbonate......Burial stress on a sediment or sedimentary rock is relevant for predicting compaction or failure caused by changes in, e.g., pore pressure in the subsurface. For this purpose, the stress is conventionally expressed in terms of its effect: “the effective stress” defined as the consequent elastic...... strain multiplied by the rock frame modulus. We cannot measure the strain directly in the subsurface, but from the data on bulk density and P‐wave velocity, we can estimate the rock frame modulus and Biot's coefficient and then calculate the “effective vertical stress” as the total vertical stress minus...

  3. Production of staphylococcal enterotoxins in microbial broth and milk by Staphylococcus aureus strains harboring seh gene.

    Science.gov (United States)

    Schubert, Justyna; Podkowik, Magdalena; Bystroń, Jarosław; Bania, Jacek

    2016-10-17

    Twenty Staphylococcus aureus strains harboring seh gene, including one carrying also sec gene and 11 sea gene, were grown in BHI+YE broth and milk and were tested for SEA, SEC and SEH production. All strains decreased pH of BHI+YE broth at 24h and increased them at 48h. Seventeen S. aureus strains grown in milk changed pH for no >0.3 unit until 48h. Three other S. aureus strains significantly decreased pH during growth in milk. All S. aureus produced SEH in BHI+YE broth in amounts ranging from 95 to 1292ng/ml, and from 170 to 4158ng/ml at 24 and 48h, respectively. SEH production in milk by 17 strains did not exceed 23ng/ml at 24h and 36ng/ml at 48h. Three S. aureus strains able to decrease milk pH produced 107-3029ng/ml and 320-4246ng/ml of SEH in milk at 24 and 48h, respectively. These strains were grown in milk and BHI+YE broth with pH stabilized at values near neutral leading to a significant decrease of SEH production. Representative weak SEH producers were grown in milk at reduced pH resulting in moderate increase in SEH production. SEA was produced in milk by 10S. aureus strains at 24-151ng/ml at 24h, and 31-303ng/ml at 48h. SEA production in milk was higher or comparable as in BHI+YE broth in 3 strains and lower for remaining strains. Production of SEC by sec-positive S. aureus strains was lower in milk than in BHI+YE broth, ranging from 131 to 2319ng/ml at 24 and 48h in milk and 296-30,087ng/ml in BHI+YE at 24 and 48h. Both lacE and lacG transcripts involved in lactose metabolism were significantly up-regulated in milk in strong SEH producers. In these strains hld, rot and sarA transcripts were up-regulated in milk as compared to weak SEH producers. Stabilization of milk pH at a value of raw milk significantly down-regulated hld, rot and sarA RNA in strong SEH producers. Milk was generally found unfavorable for enterotoxin production. However, certain S. aureus strains were not restricted in SEH and SEA expression in milk, unlike SEC which remained down

  4. Sea surface temperature anomalies in the Arabian Sea

    Digital Repository Service at National Institute of Oceanography (India)

    RameshKumar, M.R.

    . Further analysis has shown that the sea surface anomalies are well correlated to the anomalies of air temperature and latent heat flux values; whereas they are least correlated to the anomalies of wind stress and net radiation values, except over...

  5. Sea otters and Alaska's developing sea farming industry

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The objectives of this paper are to give an overview of the current status of the industry in Alaska, identify potential problems between mariculture and sea otters...

  6. Chemical oceanography of the Arabian Sea Part iv Laccadive sea

    Digital Repository Service at National Institute of Oceanography (India)

    SenGupta, R.; Moraes, C.; Kureishy, T.W.; Sankaranarayanan, V.N.; Jana, T.K.; Naqvi, S.W.A.; Rajagopal, M.D.

    Patterns of distribution of nutrients and nutrients-oxygen relationships are similar to those observed in other parts of the Arabian Sea High magnesium and low fluoride concentrations in the water indicate probable loss of the latter as insoluble ion...

  7. Iridium in sea-water.

    Science.gov (United States)

    Fresco, J; Weiss, H V; Phillips, R B; Askeland, R A

    1985-08-01

    Iridium in sea-water has been measured (after isolation from the saline matrix by reduction with magnesium) by neutron bombardment, radiochemical purification and high-resolution gamma-ray spectroscopy. The concentration obtained in a Pacific coastal water was 1.02 +/- 0.26 x 10(-14) g per g of sea-water. At such extremely low concentrations, seawater is an extremely unlikely source for anomalously high iridium concentrations measured in the Cretaceous-Tertiary boundary layer of deep-sea sediments.

  8. Iridium in sea-water

    Energy Technology Data Exchange (ETDEWEB)

    Fresco, J.; Weiss, H.V.; Phillips, R.B.; Askeland, R.A.

    1985-08-01

    Iridium in sea-water has been measured (after isolation from the saline matrix by reduction with magnesium) by neutron bombardment, radiochemical purification and high resolution ..gamma..-ray spectroscopy. The concentration obtained in a Pacific coastal water was 1.02 +- 0.26 x 10/sup 14/ g per g of sea-water. At such extremely low concentrations, seawater is an extremely unlikely source for anomalously high iridium concentrations measured in the Cretaceous-Tertiary boundary layer of deep-sea sediments.

  9. How SEA can inform lenders

    DEFF Research Database (Denmark)

    Banhalmi-Zakar, Zsuzsa; Larsen, Sanne Vammen

    SEA can be a powerful tool to improve decision-making for plans, policies and programmes, but it can also be a useful for banks. SEA can help lenders address the reputational risks they are exposed to through financing projects that may have a negative impact on the environment and it can also help......, such as in the credit policies. It was also found that in some cases lenders become involved in project planning at a very early stage, when projects are conceptualized, and certainly before formal approval is sought from relevant authorities and an EIA is conducted. This suggests that SEA can be a useful tool...

  10. The politics of SEA indicators

    DEFF Research Database (Denmark)

    Gao, Jingjing; Kørnøv, Lone; Christensen, Per

    2013-01-01

    The use of indicators is not only technical and science-led, but also a value-laden social process, and thus concerns public participation, political judgment and decision-making. This article approaches the Chinese SEA indicator system from a science-policy interface and aims at: 1) contributing...... to the general recognition of indicators functioning at science-policy interfaces in SEA, and 2) analysing, through a Chinese case-study, to what extent national guidelines mediate the science-policy interaction. The overall finding is a strong emphasis on technical/science aspects found in the Chinese SEA...

  11. Strained graphene Hall bar

    Science.gov (United States)

    Milovanović, S. P.; Peeters, F. M.

    2017-02-01

    The effects of strain, induced by a Gaussian bump, on the magnetic field dependent transport properties of a graphene Hall bar are investigated. The numerical simulations are performed using both classical and quantum mechanical transport theory and we found that both approaches exhibit similar characteristic features. The effects of the Gaussian bump are manifested by a decrease of the bend resistance, R B, around zero-magnetic field and the occurrence of side-peaks in R B. These features are explained as a consequence of bump-assisted scattering of electrons towards different terminals of the Hall bar. Using these features we are able to give an estimate of the size of the bump. Additional oscillations in R B are found in the quantum description that are due to the population/depopulation of Landau levels. The bump has a minor influence on the Hall resistance even for very high values of the pseudo-magnetic field. When the bump is placed outside the center of the Hall bar valley polarized electrons can be collected in the leads.

  12. Summer sea ice characteristics of the Chukchi Sea

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    During August 1999, we investigated sea ice characteristics; its distribution, surface feature, thickness, ice floe movement, and the temperature field around inter-borders of air/ice/seawater in the Chukchi Sea. Thirteen ice cores were drilled at 11 floe stations in the area of 72°24′ 77°18′N, 153°34′ 163°28′W and the ice core structure was observed. From field observation, three melting processes of ice were observed; surface layer melting, surface and bottom layers melting, and all of ice melting. The observation of temperature fields around sea ice floes showed that the bottom melting under the ice floes were important process. As ice floes and open water areas were alternately distributed in summer Arctic Ocean; the water under ice was colder than the open water by 0.4 2.8℃. The sun radiation heated seawater in open sea areas so that the warmer water went to the bottom when the ice floes move to those areas. This causes ice melting to start at the bottom of the ice floes. This process can balance effectively the temperature fluctuating in the sea in summer. From the crystalline structure of sea ice observed from the cores, it was concluded that the ice was composed of ice crystals and brine-ice films. During the sea ice melting, the brine-ice films between ice crystals melted firstly; then the ice crystals were encircled by brine films; the sea ice became the mixture of ice and liquid brine. At the end of melting, the ice crystals would be separated each other, the bond between ice crystals weakens and this leads to the collapse of the ice sheet.

  13. SMOS Sea Surface Salinity Validation in the South China Sea

    Science.gov (United States)

    Ren, Yongzheng; Li, Xiaoming; Dong, Qing

    2013-01-01

    In November 2009, the European Space Agency (ESA) launched the first soil moisture and ocean salinity (SMOS) satellite, which represented the first use of spaceborne remote sensing tools to probe global sea surface salinity (SSS). The SMOS satellite carries a microwave imaging radiometer with aperture synthesis (MIRAS) for detection in the microwave L-band as the only payload. The MIRAS instrument is expected to provide a global SSS distribution with a spatial resolution of approximately 100 km and an accuracy of 0.1-0.2 practical salinity units (psu). The South China Sea is semi-enclosed, and the sea conditions are relatively complex. The suitability of ESA SMOS salinity products for the South China Sea has not been validated. Therefore, using SSS data measured during an expedition in the South China Sea, which was sponsored by China Natural Science Foundation and conducted in the fall of 2011, this paper validated the SSS products released by ESA, which were retrieved using three sea surface roughness models. To analyze the effect of the spatial resolution on the weekly average SMOS SSS distribution, the weekly average salinity data were averaged to reduce the spatial resolution to 0.25 ° x 0.25°. These average data were then compared to the measured data, followed by an analysis of the error variation. In addition, the effects of the orbital track (ascending or descending) on the SSS retrieval were analyzed.

  14. Residual strains in conduit arteries.

    Science.gov (United States)

    Rachev, A; Greenwald, S E

    2003-05-01

    Residual strains and stresses are those that exist in a body when all external loads are removed. Residual strains in arteries can be characterized by the opening angle of the sector-like cross-section which arises when an unloaded ring segment is radially cut. A review of experimental methods for measuring residual strains and the main results about the variation of the opening angle with arterial localization, age, smooth muscle activity, mechanical environment and certain vascular pathologies are presented and discussed. It is shown that, in addition to their well-established ability to homogenize the stress field in the arterial wall, residual strains make arteries more compliant and thereby improve their performance as elastic reservoirs and ensure more effective local control of the arterial lumen by smooth muscle cells. Finally, evidence that, in some cases, residual strains remain in arteries even after they have been cut radially is discussed.

  15. Building a bio-based industry in the Middle East through harnessing the potential of the Red Sea biodiversity

    DEFF Research Database (Denmark)

    Nielsen, Jens; Archer, John; Essack, Magbubah

    2017-01-01

    of microbes is their great biological diversity, which offers a much larger “catalog” of molecules than the one obtainable by chemical synthesis. Adaptation to different environments is one of the important drives behind microbial diversity. We argue that the Red Sea, which is a rather unique marine niche......, have established important leads on the Red Sea biological potential, with newly isolated strains of Bacilli and Cyanobacteria. We argue that these two groups of local organisms are currently most promising in terms of developing cell factories, due to their ability to operate in saline conditions...... needed to overcome the hurdles of developing efficient cell factories from the Red Sea isolates....

  16. Joseph O’Connor. Star of the Sea

    Directory of Open Access Journals (Sweden)

    Alexandra POULAIN

    2007-10-01

    Full Text Available It has become a commonplace to note that although the Irish Famine was a major cataclysm, and one which contributed to the complete reshaping of Ireland in the late nineteenth-century, it has not often found its way into Irish literature – arguably because it was simply too traumatic for representation: as Terry Eagleton puts it, “the events strains at the limits of the inarticulable.” In Star of the Sea, however, the young Irish novelist Joseph O’Connor not only vividly conjures up the memor...

  17. Towards Good Order at Sea

    DEFF Research Database (Denmark)

    Mandrup, Thomas; Vreÿ, Francois

    . The problems originating from the resultant “bad order at sea” can be directly felt on land, when smuggling, terrorism and related criminal activities operate more or less unhindered. The book provides an important mapping of the challenges preventing good order at sea off the African coast and East Africa......This book addresses a timely and important theme in the debate on how to create good governance at sea in general, but specifically in the Western Indian Ocean. In a security milieu where the number of piracy attacks originating from Somalia has decreased, there is an urgent need to address...... structural problems facing attempts to create and maintain good order at sea off East Africa. As mentioned in one of the chapters, the most secure place for a criminal in East Africa to be is at sea, because most African littoral states have only limited capacity to police their territorial waters...

  18. USGS Sea Ice Email Script

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — Daily sea ice imagery and charting benefits logistics and navigational planning in the Alaskan Arctic waters, yet access to these data often requires high bandwidth...

  19. Doppler characteristics of sea clutter.

    Energy Technology Data Exchange (ETDEWEB)

    Raynal, Ann Marie; Doerry, Armin Walter

    2010-06-01

    Doppler radars can distinguish targets from clutter if the target's velocity along the radar line of sight is beyond that of the clutter. Some targets of interest may have a Doppler shift similar to that of clutter. The nature of sea clutter is different in the clutter and exo-clutter regions. This behavior requires special consideration regarding where a radar can expect to find sea-clutter returns in Doppler space and what detection algorithms are most appropriate to help mitigate false alarms and increase probability of detection of a target. This paper studies the existing state-of-the-art in the understanding of Doppler characteristics of sea clutter and scattering from the ocean to better understand the design and performance choices of a radar in differentiating targets from clutter under prevailing sea conditions.

  20. A Can of Sea Worms

    Science.gov (United States)

    Zinn, Donald J.

    1977-01-01

    A comprehensive discussion of the free-living worms that inhabit the beaches and subtidal bottoms of the Cape Cod shoreline is presented. Methods for the location, collection, preservation, and identification of sea worms are identified. (BT)

  1. Temperature measurement in the sea

    Digital Repository Service at National Institute of Oceanography (India)

    Krishnamacharyulu, R.J.; Rao, L.V.G.

    ), their advantages and limitations are also touched upon. Calibration of various instruments used for temperature measurement in the sea and the special setup/facilities needed for this purpose are also discussed...

  2. Sea otter studies in Alaska

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — The final objective of the present Fish and Wildlife sea otter program is to learn enough of the ecology, population, reproductive potential, and requirements in...

  3. Spirulina culture in sea water

    Energy Technology Data Exchange (ETDEWEB)

    Materassi, R.; Tredici, M.; Waldemaro, B.

    1984-01-01

    Laboratory experiments using small raceway ponds have shown that Spirulina maxima can be adapted easily to grow in sea-water supplemented with nitrate, phosphate, bicarbonate, and Fe-EDTA. To prevent precipitate formation, phosphate was supplied by diffusion through a dialysis membrane; the amount of Na-bicarbonate added was low (100 ppm) and the pH was kept in the range 8.6 - 8.8 by bubbling CO/sub 2/ into the culture. No significant differences have been noticed in productivity or in the chemical composition of the biomass between cultures in sea-water and in the standard bicarbonate medium. Cultures subjected to light/dark cycles of 12/12 hours showed a higher respiration rate in sea-water than in the bicarbonate medium. The higher weight loss in the sea-water medium in the dark was counterbalanced by an increased synthesis of carbohydrates during the light period. 9 references.

  4. Black Sea Bass genetic connectivity

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Microsatellite analysis of black sea bass was undertaken to determine magnitude and direction of mixing of black seabass across the Hatteras boundary, as well as...

  5. Sea Turtle Acoustic Telemetry Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Acoustic tags were attached to sea turtles captured in various fishing gear and the animals are either actively or passively tracked

  6. Sea bed mapping and inspection

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2006-07-01

    The conference has 24 presentations on the topics: Sea bed mapping, inspection, positioning, hydrography, marine archaeology, remote operation vehicles and computerized simulation technologies, oil field activities and plans, technological experiences and problems. (tk)

  7. High temperature strain measurement with a resistance strain gage

    Science.gov (United States)

    Lei, Jih-Fen; Fichtel, ED; Mcdaniel, Amos

    1993-01-01

    A PdCr based electrical resistance strain gage was demonstrated in the laboratory to be a viable sensor candidate for static strain measurement at high temperatures. However, difficulties were encountered while transferring the sensor to field applications. This paper is therefore prepared for recognition and resolution of the problems likely to be encountered with PdCr strain gages in field applications. Errors caused by the measurement system, installation technique and lead wire attachment are discussed. The limitations and some considerations related to the temperature compensation technique used for this gage are also addressed.

  8. Diversity and Bioactivity of Actinomycetes from Marine Sediments of the Yellow Sea

    Institute of Scientific and Technical Information of China (English)

    ZHANG Shumin; YE Liang; TANG Xuexi

    2012-01-01

    Among the 116 actinomycetes collected from marine sediments of the Yellow Sea,56 grew slowly and appeared after 2-3 weeks of incubation.Among the 56 strains,only 3 required seawater (SW) for growth,and 21 grew well in the medium prepared with SW rather than distilled water (DW),while the remaining 32 grew well either with SW or with DW.Six representatives with different morphological characteristics,including 1 SW-requiring strain and 5 well-growing with SW strains,were selected for phylogenetic analysis based on 16S rRNA gene.Two strains belong to Micrococcaceae and Nocardiopsaceae respectively.The other 4strains belong to the family of Streptomycetaceae.In the analyzed 6 strains,one was related to Nocardiopsis spp.and the other three were related to Streptomyces spp.,representing new taxa.Bioactivity testing of fermentation products from 3 SW-requiring strains and 21 well-growing with SW strains revealed that 17 strains possessed remarkable activities against gram-positive pathogen or/and tumor cells,suggesting that they were prolific resources for natural drug discovery.

  9. Diversity and bioactivity of actinomycetes from marine sediments of the Yellow Sea

    Science.gov (United States)

    Zhang, Shumin; Ye, Liang; Tang, Xuexi

    2012-03-01

    Among the 116 actinomycetes collected from marine sediments of the Yellow Sea, 56 grew slowly and appeared after 2-3 weeks of incubation. Among the 56 strains, only 3 required seawater (SW) for growth, and 21 grew well in the medium prepared with SW rather than distilled water (DW), while the remaining 32 grew well either with SW or with DW. Six representatives with different morphological characteristics, including 1 SW-requiring strain and 5 well-growing with SW strains, were selected for phylogenetic analysis based on 16S rRNA gene. Two strains belong to Micrococcaceae and Nocardiopsaceae respectively. The other 4 strains belong to the family of Streptomycetaceae. In the analyzed 6 strains, one was related to Nocardiopsis spp. and the other three were related to Streptomyces spp., representing new taxa. Bioactivity testing of fermentation products from 3 SW-requiring strains and 21 well-growing with SW strains revealed that 17 strains possessed remarkable activities against gram-positive pathogen or/and tumor cells, suggesting that they were prolific resources for natural drug discovery.

  10. Dynamic Topography of the Bering Sea

    Science.gov (United States)

    2011-01-01

    Bering Sea. Comparisons also indicate that MDT estimates derived from the latest Gravity Recovery and Climate Experiment geoid model have more in common...with the presented sea surface topography than with the MDTs based on earlier versions of the geoid . The presented MDT will increase the accuracy of...estimating the geoid in the Bering Sea. 15. SUBJECT TERMS dynamic topography, sea surface height, Bering Sea, 4DVar 16. SECURITY CLASSIFICATION OF: a

  11. Alien seas oceans in space

    CERN Document Server

    Lopes, Rosaly

    2013-01-01

    In the early days of planetary observation, oceans were thought to exist in all corners of the Solar System. Carbonated seas percolated beneath the clouds of Venus. Features on the Moon's surface were given names such as "the Bay of Rainbows” and the "Ocean of Storms." With the advent of modern telescopes and spacecraft exploration these ancient concepts of planetary seas have been replaced by the reality of something even more exotic. Alien Seas serves up the current research, past beliefs, and new theories to offer a rich array of the "seas" on other worlds. It is organized by location and by the material composing the oceans under discussion, with expert authors penning chapters on their  specialty. Each chapter features new original art depicting alien seas, as well as the latest ground-based and spacecraft images. With the contributors as guides, readers can explore the wild seas of Jupiter's watery satellite Europa, believed similar in composition to battery acid. Saturn's planet-sized moon Titan see...

  12. Stress, strain rate and anisotropy in Kyushu, Japan

    Science.gov (United States)

    Savage, M. K.; Aoki, Y.; Unglert, K.; Ohkura, T.; Umakoshi, K.; Shimizu, H.; Iguchi, M.; Tameguri, T.; Ohminato, T.; Mori, J.

    2016-04-01

    correlate positively with stress ratio (c = 0.43, significant at 99% confidence). All three orientations are E-W in central Kyushu, where the compressional strain rate is highest. Both splitting and stress suggest plate-boundary-parallel maximum principal stress just off the coast of Kyushu, where strain rate measurements are sparse. South western Kyushu has the largest difference between directions of strain rate and stress. Φ from shallow and deep earthquakes are not well aligned, suggesting that the deep earthquake waveforms are not simply split in the crust. Causes for the anisotropy may be olivine crystals aligned by drag of the subducting Philippine Sea plate in the mantle and stress-aligned microcracks in the crust.

  13. Aureimonas glaciistagni sp. nov., isolated from a melt pond on Arctic sea ice.

    Science.gov (United States)

    Cho, Yirang; Lee, Inae; Yang, Yoon Y; Baek, Kiwoon; Yoon, Soo J; Lee, Yung M; Kang, Sung-Ho; Lee, Hong K; Hwang, Chung Y

    2015-10-01

    A Gram-staining-negative, motile, aerobic and rod-shaped bacterial strain, PAMC 27157T, was isolated from a melt pond on sea ice in the Chukchi Sea. Phylogenetic analysis of the 16S rRNA gene sequence of strain PAMC 27157T revealed an affiliation to the genus Aureimonas with the closest sequence similarity (96.2 %) to that of Aureimonas phyllosphaerae. Strain PAMC 27157T grew optimally at 30 °C and pH 7.0 in the presence of 3.5 % (w/v) NaCl. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylmonomethylethanolamine, sulfoquinovosyldiacylglycerol and an unidentified aminolipid. The major cellular fatty acid was summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c, 83.1 %) and the major respiratory quinone was Q-10. The genomic DNA G+C content was 69.1 mol%. The combined phylogenetic, phenotypic and chemotaxonomic data showed that strain PAMC 27157T could be clearly distinguished from species of the genus Aureimonas with validly published names. Thus, strain PAMC 27157T should be classified as representing a novel species in the genus Aureimonas, for which the name Aureimonas glaciistagni sp. nov. is proposed. The type strain is PAMC 27157T ( = KCCM 43049T = JCM 30183T).

  14. Sulfate-Reducing Prokaryotes from North Sea Oil reservoirs; organisms, distribution and origin

    Energy Technology Data Exchange (ETDEWEB)

    Beeder, Janiche

    1996-12-31

    During oil production in the North Sea, anaerobic seawater is pumped in which stimulates the growth of sulphate-reducing prokaryotes that produce hydrogen sulphide. This sulphide causes major health hazards, economical and operational problems. As told in this thesis, several strains of sulphate reducers have been isolated from North Sea oil field waters. Antibodies have been produced against these strains and used to investigate the distribution of sulphate reducers in a North Sea oil reservoir. The result showed a high diversity among sulphate reducers, with different strains belonging to different parts of the reservoir. Some of these strains have been further characterized. The physiological and phylogenetic characterization showed that strain 7324 was an archaean. Strain A8444 was a bacterium, representing a new species of a new genus. A benzoate degrading sulphate reducing bacterium was isolated from injection water, and later the same strain was detected in produced water. This is the first field observations indicating that sulphate reducers are able to penetrate an oil reservoir. It was found that the oil reservoir contains a diverse population of thermophilic sulphate reducers able to grow on carbon sources in the oil reservoir, and to live and grow in this extreme environment of high temperature and pressure. The mesophilic sulphate reducers are established in the injection water system and in the reservoir near the injection well during oil production. The thermophilic sulphate reducers are able to grow in the reservoir prior to, as well as during production. It appears that the oil reservoir is a natural habitat for thermophilic sulphate reducers and that they have been present in the reservoir long before production started. 322 refs., 9 figs., 11 tabs.

  15. Mercury retention in several strains and strain crosses of chickens

    Energy Technology Data Exchange (ETDEWEB)

    Miller, V.L.; Bearse, G.E.; Csonka, E.

    1970-01-01

    The retention of mercury from injections of mercuric chloride was determined in 32 samples of chicks from various strains and strain crosses of egg type stock. The chicks retaining the most mercury had some four times as much mercury in the liver and kidneys as the chicks retaining the lowest amount. The chicks selected for resistance to leukosis retained more mercury than the susceptible chicks within several leukosis breeding programs.

  16. Roll bonding of strained aluminium

    DEFF Research Database (Denmark)

    Staun, Jakob M.

    2003-01-01

    This report investigates roll bonding of pre-strained (å ~ 4) aluminium sheets to produce high strain material from high purity aluminium (99.996%) and commercial pure aluminium (99.6%). The degree of bonding is investigated by optical microscopy and ultrasonic scanning. Under the right...... of the cross rolled volume fraction is found. To further asses this effect, and the anisotropy, it is necessary to acquire knowledge about both texture and microstructure, e.g. by TEM. Roll bonding of pre-strained aluminium is found to be a possible alternative to ARB in the quest for ultra-fine grained...

  17. Roll bonding of strained aluminium

    DEFF Research Database (Denmark)

    Staun, Jakob M.

    2003-01-01

    This report investigates roll bonding of pre-strained (å ~ 4) aluminium sheets to produce high strain material from high purity aluminium (99.996%) and commercial pure aluminium (99.6%). The degree of bonding is investigated by optical microscopy and ultrasonic scanning. Under the right...... of the cross rolled volume fraction is found. To further asses this effect, and the anisotropy, it is necessary to acquire knowledge about both texture and microstructure, e.g. by TEM. Roll bonding of pre-strained aluminium is found to be a possible alternative to ARB in the quest for ultra-fine grained...

  18. Sea otter investigation, Amchitka Island, 1954, and proposed plan of research for sea otters

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report describes a sea otter investigation on Amchitka Island during 1954 and a proposed plan of research for sea otters. The report covers capturing wild sea...

  19. DNA and lipid molecular stratigraphic records of haptophyte succession in the Black Sea during the Holocene

    Science.gov (United States)

    Coolen, Marco J. L.; Saenz, James P.; Giosan, Liviu; Trowbridge, Nan Y.; Dimitrov, Petko; Dimitrov, Dimitar; Eglinton, Timothy I.

    2009-07-01

    Previous studies suggest that the coccolithophorid haptophyte Emiliania huxleyi entered the Black Sea ~ 3400 yrs ago and since then a coccolith ooze defined as Unit I has developed. Unit I sediments contain long-chain alkenones derived from E. huxleyi whereas the alkenone distribution of the deeper coccolith-free sapropel (Unit II) is rather unusual. Alkenone-derived past sea surface temperature (SST) estimates suggest a large difference between Unit II and Unit I, which is likely a result of unusual biological precursors of the alkenones in Unit II. Here, we report a high-resolution stratigraphic analysis of ancient haptophyte DNA to establish the Holocene succession of haptophytes as sources of the alkenones in the Black Sea. Haptophytes related to brackish Isochrysis spp. were the initial sources of alkenones, and appeared immediately after the onset of sapropel deposition (~ 7550 yrs before present [a BP]). As salinity increased, Isochrysis-related haptophytes were slowly replaced by a complex suite of E. huxleyi strains as sources of alkenones. Our paleogenetic data showed that E. huxleyi colonized the Black Sea shortly after the onset of sapropel deposition, ~ 4000 yrs earlier than previously recognized based on their preserved coccoliths. E. huxleyi strains were the most likely source of the previously reported abundant and unusual C 36 di-unsaturated "Black Sea alkenone". Strong haptophyte species and strain-specific effects were observed on the level of unsaturation of alkenones which resulted in spurious alkenone-derived SST estimates before 5250 a BP. In contrast, from ~ 5250 a BP onwards a relatively stable haptophyte assemblage dominated by a different suite of E. huxleyi strains yielded robust alkenone-SST values and indicated a gradual cooling from 19 °C to ~ 15 °C at the top of the record (~ 450 a BP).

  20. Deep-sea Hexactinellida (Porifera) of the Weddell Sea

    Science.gov (United States)

    Janussen, Dorte; Tabachnick, Konstantin R.; Tendal, Ole S.

    2004-07-01

    New Hexactinellida from the deep Weddel Sea are described. This moderately diverse hexactinellid fauna includes 14 species belonging to 12 genera, of which five species and one subgenus are new to science: Periphragella antarctica n. sp., Holascus pseudostellatus n. sp., Caulophacus (Caulophacus) discohexactinus n. sp., C. ( Caulodiscus) brandti n. sp., C. ( Oxydiscus) weddelli n. sp., and C. ( Oxydiscus) n. subgen. So far, 20 hexactinellid species have been reported from the deep Weddell Sea, 15 are known from the northern part and 10 only from here, while 10 came from the southern area, and five of these only from there. However, this apparent high "endemism" of Antarctic hexactinellid sponges is most likely the result of severe undersampling of the deep-sea fauna. We find no reason to believe that a division between an oceanic and a more continental group of species exists. The current poor database indicates that a substantial part of the deep hexactinellid fauna of the Weddell Sea is shared with other deep-sea regions, but it does not indicate a special biogeographic relationship with any other ocean.

  1. Toxic Algae and Early Warning Management in Yellow Sea and Bohai Sea of China

    Institute of Scientific and Technical Information of China (English)

    Song; Lun; Song; Guangjun; Song; Yonggang; Xu; Xiaohong

    2014-01-01

    The research status of toxic algae in Yellow Sea and Bohai Sea are reviewed from the aspects of toxicity characteristics,toxic mechanism and early warning management,and the existing toxic algae and their toxicity in Yellow Sea and Bohai Sea are analyzed in the paper. The early warning level of toxic algae in Yellow Sea and Bohai Sea of China is put forward,and the research direction of shellfish poisoning in future is summarized.

  2. Magnetohydrodynamic sea water propulsion

    Energy Technology Data Exchange (ETDEWEB)

    Petrick, M.; Thomas, A.; Genens, L.; Libera, J.; Nietert, R.; Bouillard, J.; Pierson, E.; Hill, D.; Picologlou, B.; Ohlsson, O.; Kasprzyk, T.; Berry, G.

    1991-01-01

    An experimental and theoretical investigation of a large scale MHD propulsor has been undertaken whose objectives are to (1) investigate the transient and steady state performance of the thruster over operating parameter ranges that are compatible with achievement of high efficiency, (2) to quantify the principal loss mechanisms within the thruster and (3) to obtain preliminary hydroacoustic data. The performance of the thruster was first investigated theoretically with a 3-D code to quantify the loss mechanisms and identify experimental parameter ranges of interest. The loss mechanisms of interest are ohmic losses within the channel and those resulting from electrical currents at the entrance and exit of the thruster, and enhanced frictional losses. The analysis indicated that the relative importance of the loss mechanisms was a function of the thruster design and operating parameters. The experimental investigation of the large scale propulsor is being conducted on a sea water test facility that was designed to match the capabilities of a large 6-T superconducting magnet. The facility design was such that {approximately}90{degrees} of all losses occurred within the propulsion test train (inlet nozzle, propulsor and diffuser) thus facilitating isolation of the loss mechanisms. The test thruster itself is heavily instrumented to provide local measurements of velocity, pressure, and electric fields. The predicted overall thruster performance and value of the loss mechanisms will be compared with measured values. Comparisons will also be presented of the voltage gradients between electrodes, overall thruster efficiency, axial pressure gradients across the propulsor, change in velocity profiles, axial and vertical current distributions and exit distribution of the electrolytic gases.

  3. Magnetohydrodynamic sea water propulsion

    Energy Technology Data Exchange (ETDEWEB)

    Petrick, M.; Thomas, A.; Genens, L.; Libera, J.; Nietert, R.; Bouillard, J.; Pierson, E.; Hill, D.; Picologlou, B.; Ohlsson, O.; Kasprzyk, T.; Berry, G.

    1991-12-31

    An experimental and theoretical investigation of a large scale MHD propulsor has been undertaken whose objectives are to (1) investigate the transient and steady state performance of the thruster over operating parameter ranges that are compatible with achievement of high efficiency, (2) to quantify the principal loss mechanisms within the thruster and (3) to obtain preliminary hydroacoustic data. The performance of the thruster was first investigated theoretically with a 3-D code to quantify the loss mechanisms and identify experimental parameter ranges of interest. The loss mechanisms of interest are ohmic losses within the channel and those resulting from electrical currents at the entrance and exit of the thruster, and enhanced frictional losses. The analysis indicated that the relative importance of the loss mechanisms was a function of the thruster design and operating parameters. The experimental investigation of the large scale propulsor is being conducted on a sea water test facility that was designed to match the capabilities of a large 6-T superconducting magnet. The facility design was such that {approximately}90{degrees} of all losses occurred within the propulsion test train (inlet nozzle, propulsor and diffuser) thus facilitating isolation of the loss mechanisms. The test thruster itself is heavily instrumented to provide local measurements of velocity, pressure, and electric fields. The predicted overall thruster performance and value of the loss mechanisms will be compared with measured values. Comparisons will also be presented of the voltage gradients between electrodes, overall thruster efficiency, axial pressure gradients across the propulsor, change in velocity profiles, axial and vertical current distributions and exit distribution of the electrolytic gases.

  4. Molecular Diversity and Predictability of Vibrio parahaemolyticus along the Georgian coastal zone of the Black Sea

    Directory of Open Access Journals (Sweden)

    Bradd J. Haley

    2014-02-01

    Full Text Available Vibrio parahaemolyticus is a leading cause of seafood-related gastroenteritis and is also an autochthonous member of marine and estuarine environments worldwide. One hundred seventy strains of V. parahaemolyticus were isolated from water and plankton samples collected along the Georgian coast of the Black Sea during 28 months of sample collection. All isolated strains were tested for presence of tlh, trh, and tdh. A subset of strains were serotyped and tested for additional factors and markers of pandemicity. Twenty-six serotypes, five of which are clinically relevant, were identified. Although all 170 isolates were negative for tdh, trh, and the Kanagawa Phenomenon, 7 possessed the GS-PCR sequence and 27 the 850 bp sequence of V. parahaemolyticus pandemic strains. The V. parahaemolyticus population in the Black Sea was estimated to be genomically heterogeneous by rep-PCR and the serodiversity observed did not correlate with rep-PCR genomic diversity. Statistical modeling was used to predict presence of V. parahaemolyticus as a function of water temperature, with strongest concordance observed for Green Cape site samples (Percent of total variance = 70, P < 0.001. Results demonstrate a diverse population of V. parahaemolyticus in the Black Sea, some of which carry pandemic markers, with increased water temperature correlated to an increase in abundance of V. parahaemolyticus.

  5. Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data

    Directory of Open Access Journals (Sweden)

    Wilhelm Larry J

    2007-11-01

    Full Text Available Abstract Background One objective of metagenomics is to reconstruct information about specific uncultured organisms from fragmentary environmental DNA sequences. We used the genome of an isolate of the marine alphaproteobacterium SAR11 ('Candidatus Pelagibacter ubique'; strain HTCC1062, obtained from the cold, productive Oregon coast, as a query sequence to study variation in SAR11 metagenome sequence data from the Sargasso Sea, a warm, oligotrophic ocean gyre. Results The average amino acid identity of SAR11 genes encoded by the metagenomic data to the query genome was only 71%, indicating significant evolutionary divergence between the coastal isolates and Sargasso Sea populations. However, an analysis of gene neighbors indicated that SAR11 genes in the Sargasso Sea metagenomic data match the gene order of the HTCC1062 genome in 96% of cases (> 85,000 observations, and that rearrangements are most frequent at predicted operon boundaries. There were no conserved examples of genes with known functions being found in the coastal isolates, but not the Sargasso Sea metagenomic data, or vice versa, suggesting that core regions of these diverse SAR11 genomes are relatively conserved in gene content. However, four hypervariable regions were observed, which may encode properties associated with variation in SAR11 ecotypes. The largest of these, HVR2, is a 48 kb region flanked by the sole 5S and 23S genes in the HTCC1062 genome, and mainly encodes genes that determine cell surface properties. A comparison of two closely related 'Candidatus Pelagibacter' genomes (HTCC1062 and HTCC1002 revealed a number of "gene indels" in core regions. Most of these were found to be polymorphic in the metagenomic data and showed evidence of purifying selection, suggesting that the same "polymorphic gene indels" are maintained in physically isolated SAR11 populations. Conclusion These findings suggest that natural selection has conserved many core features of SAR11

  6. Dead sea asphalts: historical aspects

    Energy Technology Data Exchange (ETDEWEB)

    Nissenbaum, A.

    1978-05-01

    Asphalts are present in the Dead Sea basin in three forms: (1) huge blocks, up to 100 tons in weight, composed of extremely pure (>99.99%) solid asphalt occasionally found floating on the lake, (2) veins, seepages, and cavity and fissure fillings in Lower Cretaceous to Holocene rocks, and (3) ozocerite veins on the eastern shore of the lake. Dead Sea asphalts probably have been documented over a longer period of time than any other hydrocarbon deposit--from antiquity to the 19th century. Major uses of asphalt from the Dead Sea have been as an ingredient in the embalming process, for medicinal purposes, for fumigation, and for agriculture. The first known war for control of a hydrocarbon deposit was in the Dead Sea area in 312 B.C. between the Seleucid Syrians and the Nabatean Arabs who lived around the lake. Surface manifestations of asphalt are linked closely to tectonic activity. In the lake itself, the asphalt is associated with diapirs During certain historic periods, tectonic and diapiric activity caused frequent liberation to the Dead Sea surface of semiliquid asphalt associated with large amounts of hydrogen sulfide gas. When the tectonic activity was attenuated, as in the 19th and 20th centuries, the rate of asphalt seepage to the bottom sediments of the Dead Sea was much slower and the asphalt solidified on the lake bottom. The release of asphalt to the surface became much more sporadic, and may have resulted in part from earthquakes. Thus, future asphalt prospecting in the Dead Sea area should be conducted along the boundaries of diapirs or their associated faults.

  7. Thioclava arenosa sp. nov., isolated from sea sand.

    Science.gov (United States)

    Thongphrom, Chutimon; Kim, Jong-Hwa; Bora, Nagamani; Kim, Wonyong

    2017-06-01

    A Gram-staining-negative, non-spore-forming, non-motile, rod-shaped, facultatively anaerobe bacterial strain, designated CAU 1312T, was isolated from sea sand of Eurwangri beach, South Korea. The strain's taxonomic position was investigated using a polyphasic approach. CAU 1312T grew at temperatures from 20 to 40 °C, in the range of pH 6.0-9.0 and at salinities from 1-4 % (w/v). The results of phylogenetic analysis based on the 16S rRNA gene sequence revealed that CAU 1312T represented a member of the genus Thioclava and was most closely related to Thioclava atlantica 13D2W-2T (similarity 96.53 %). The strain contained Q-10 as the predominant menaquinone and summed feature 8 (C18 : 1ω7c/ω6c) as the major fatty acid. The polar lipids of CAU 1312T consisted of phosphatidylethanolamine, phosphatidylglycerol, two aminophospholipids, a phosphoglycolipid, and two unidentified phospholipids. The DNA G+C content was 64.7 mol%. On the basis of phenotypic and chemotaxonomic properties and phylogenetic inference, CAU 1312T is considered to represent a novel species of the genus Thioclava, for which the name Thioclava arenosa sp. nov. is proposed. The type strain is CAU 1312T(=KCTC 52190T=NBRC 111989T).

  8. Detection and characterization of diverse coccidian protozoa shed by California sea lions

    Directory of Open Access Journals (Sweden)

    Yvette A. Girard

    2016-04-01

    Full Text Available Tissue-cyst forming coccidia in the family Sarcocystidae are etiologic agents of protozoal encephalitis in marine mammals including the federally listed Southern sea otter (Enhydra lutris. California sea lions (Zalophus californianus, whose coastal habitat overlaps with sea otters, are definitive hosts for coccidian protozoa provisionally named Coccidia A, B and C. While Coccidia A and B have unknown clinical effects on aquatic wildlife hosts, Coccidia C is associated with severe protozoal disease in harbor seals (Phoca vitulina. In this study, we conducted surveillance for protozoal infection and fecal shedding in hospitalized and free-ranging California sea lions on the Pacific Coast and examined oocyst morphology and phenotypic characteristics of isolates via mouse bioassay and cell culture. Coccidia A and B were shed in similar frequency, particularly by yearlings. Oocysts shed by one free-ranging sea lion sampled at Año Nuevo State Park in California were previously unidentified in sea lions and were most similar to coccidia infecting Guadalupe fur seals (Arctocephalus townsendi diagnosed with protozoal disease in Oregon (USA. Sporulated Coccidia A and B oocysts did not replicate in three strains of mice or in African green monkey kidney cells. However, cultivation experiments revealed that the inoculum of fecally-derived Coccidia A and B oocysts additionally contained organisms with genetic and antigenic similarity to Sarcocystis neurona; despite the absence of detectable free sporocysts in fecal samples by microscopic examination. In addition to the further characterization of Coccidia A and B in free-ranging and hospitalized sea lions, these results provide evidence of a new role for sea lions as putative mechanical vectors of S. neurona, or S. neurona-like species. Future work is needed to clarify the distribution, taxonomical status, and pathogenesis of these parasites in sea lions and other marine mammals that share their the near

  9. Detection and characterization of diverse coccidian protozoa shed by California sea lions

    Science.gov (United States)

    Girard, Yvette A.; Johnson, Christine K.; Fritz, Heather M.; Shapiro, Karen; Packham, Andrea E.; Melli, Ann C.; Carlson-Bremer, Daphne; Gulland, Frances M.; Rejmanek, Daniel; Conrad, Patricia A.

    2015-01-01

    Tissue-cyst forming coccidia in the family Sarcocystidae are etiologic agents of protozoal encephalitis in marine mammals including the federally listed Southern sea otter (Enhydra lutris). California sea lions (Zalophus californianus), whose coastal habitat overlaps with sea otters, are definitive hosts for coccidian protozoa provisionally named Coccidia A, B and C. While Coccidia A and B have unknown clinical effects on aquatic wildlife hosts, Coccidia C is associated with severe protozoal disease in harbor seals (Phoca vitulina). In this study, we conducted surveillance for protozoal infection and fecal shedding in hospitalized and free-ranging California sea lions on the Pacific Coast and examined oocyst morphology and phenotypic characteristics of isolates via mouse bioassay and cell culture. Coccidia A and B were shed in similar frequency, particularly by yearlings. Oocysts shed by one free-ranging sea lion sampled at Año Nuevo State Park in California were previously unidentified in sea lions and were most similar to coccidia infecting Guadalupe fur seals (Arctocephalus townsendi) diagnosed with protozoal disease in Oregon (USA). Sporulated Coccidia A and B oocysts did not replicate in three strains of mice or in African green monkey kidney cells. However, cultivation experiments revealed that the inoculum of fecally-derived Coccidia A and B oocysts additionally contained organisms with genetic and antigenic similarity to Sarcocystis neurona; despite the absence of detectable free sporocysts in fecal samples by microscopic examination. In addition to the further characterization of Coccidia A and B in free-ranging and hospitalized sea lions, these results provide evidence of a new role for sea lions as putative mechanical vectors of S. neurona, or S. neurona-like species. Future work is needed to clarify the distribution, taxonomical status, and pathogenesis of these parasites in sea lions and other marine mammals that share their the near-shore marine

  10. Detection and characterization of diverse coccidian protozoa shed by California sea lions.

    Science.gov (United States)

    Girard, Yvette A; Johnson, Christine K; Fritz, Heather M; Shapiro, Karen; Packham, Andrea E; Melli, Ann C; Carlson-Bremer, Daphne; Gulland, Frances M; Rejmanek, Daniel; Conrad, Patricia A

    2016-04-01

    Tissue-cyst forming coccidia in the family Sarcocystidae are etiologic agents of protozoal encephalitis in marine mammals including the federally listed Southern sea otter (Enhydra lutris). California sea lions (Zalophus californianus), whose coastal habitat overlaps with sea otters, are definitive hosts for coccidian protozoa provisionally named Coccidia A, B and C. While Coccidia A and B have unknown clinical effects on aquatic wildlife hosts, Coccidia C is associated with severe protozoal disease in harbor seals (Phoca vitulina). In this study, we conducted surveillance for protozoal infection and fecal shedding in hospitalized and free-ranging California sea lions on the Pacific Coast and examined oocyst morphology and phenotypic characteristics of isolates via mouse bioassay and cell culture. Coccidia A and B were shed in similar frequency, particularly by yearlings. Oocysts shed by one free-ranging sea lion sampled at Año Nuevo State Park in California were previously unidentified in sea lions and were most similar to coccidia infecting Guadalupe fur seals (Arctocephalus townsendi) diagnosed with protozoal disease in Oregon (USA). Sporulated Coccidia A and B oocysts did not replicate in three strains of mice or in African green monkey kidney cells. However, cultivation experiments revealed that the inoculum of fecally-derived Coccidia A and B oocysts additionally contained organisms with genetic and antigenic similarity to Sarcocystis neurona; despite the absence of detectable free sporocysts in fecal samples by microscopic examination. In addition to the further characterization of Coccidia A and B in free-ranging and hospitalized sea lions, these results provide evidence of a new role for sea lions as putative mechanical vectors of S. neurona, or S. neurona-like species. Future work is needed to clarify the distribution, taxonomical status, and pathogenesis of these parasites in sea lions and other marine mammals that share their the near-shore marine

  11. Biscogniauxone, a New Isopyrrolonaphthoquinone Compound from the Fungus Biscogniauxia mediterranea Isolated from Deep-Sea Sediments

    Directory of Open Access Journals (Sweden)

    Bin Wu

    2016-11-01

    Full Text Available The properties and the production of new metabolites from the fungal strain LF657 isolated from the Herodotes Deep (2800 m depth in the Mediterranean Sea are reported in this study. The new isolate was identified as Biscogniauxia mediterranea based on ITS1-5.8S-ITS2 and 28S rRNA gene sequences. A new isopyrrolonaphthoquinone with inhibitory activity against glycogen synthase kinase (GSK-3β was isolated from this fungus. This is the first report of this class of compounds from a fungus isolated from a deep-sea sediment, as well as from a Biscogniauxia species.

  12. Canning Tests on Mushroom Strain

    OpenAIRE

    Gormley, T. R. (Thomas Ronan); MacCanna, C.

    1980-01-01

    Canning tests were carried out on 5 mushroom strains from 2 flushes of 4 separate crops. Particular attention was given to the ratio of whole closed canned mushrooms to that of whole closed canned mushrooms plus canned stems and pieces - i.e. total yield. Factors considered in the tests included grading prior to processing, blanching and retort losses, shrinkage in size and mushroom whiteness. Cream and off-white strains had the highest level of open and misshapen mushrooms prior to processin...

  13. PLASTICITY AND NON-LINEAR ELASTIC STRAINS

    Science.gov (United States)

    conditions existing in plane waves in an extended medium to give the time rate of change of stress as a function of the time rate of change of strain, the stress invariants, the total strain and the plastic strain. (Author)

  14. Microscopic Strain Mapping in Nanostructured and Microstructured Alumina-Titania Coatings Under 4-point Compressive and Tensile Bending

    Science.gov (United States)

    2010-06-01

    resistance, including resistance to build-up of deposits from sea salts; - Mechanical wear resistance; - Spallation / cracking / chipping resistance...indentation crack resistance, adhesion strength, spallation resistance against bend- and cut test, abrasive wear resistance, sliding wear resistance. XRD...this area are explicitly destructive and involve theoretical modeling of the strain fields accompanying material removal (e.g. hole drilling and

  15. Marinobacter xestospongiae sp. nov., isolated from the marine sponge Xestospongia testudinaria collected from the Red Sea

    KAUST Repository

    Lee, O. O.

    2011-10-14

    A Gram-negative, catalase- and oxidase-positive, non-sporulating, rod-shaped and slightly halophilic bacterial strain, designated UST090418-1611(T), was isolated from the marina sponge Xestospongia testudinaria collected from the Red Sea coast of Saudi Arabia. Phylogenetic trees based on the 16S rRNA gene sequence placed strain UST090418-1611(T) in the family Alteromonadaceae with the closest relationship to the genus Marinobacter. The 16S rRNA gene sequence similarity between the strain and the type strains of recognized Marinobacter species ranged from 92.9 to 98.3%. Although strain UST090418-1611(T) shared high 16S rRNA gene sequence similarity with Marinobacter mobilis CN46(T), M. zhejiangensis CN74(T) and M. sediminum R65(T) (98.3, 97.4 and 97.3%, respectively), the relatedness of the strain to these three strains in DNA DNA hybridization was only 58, 56 and 33%, respectively, supporting the novelty of the strain. In contrast to most strains in the genus Marinobacter, strain UST090418-1611(T) tolerated only 6% (w/v) NaCl, and optimal growth occurred at 2.0% (w/v) NaCl, pH 7.0-8.0 and 28-36 degrees C. The predominant cellular fatty acids were C-12:0 3-OH, C-16:0, C-12:0 and summed feature 3 (C-16.1 omega 6c and/or C-16:1 omega 7c) The genomic DNA G+C content was 57.1 mol%. Based on the physiological, phylogenetic and chemotaxonomic characteristics presented in this study, we suggest that the strain represents a novel species in the genus Marinobacter, for which the name Marinobacter xestospongiae sp. nov. is proposed, with UST090418-1611(T) (=JCM 17469(T) =NRRL B-59512(T)) as the type strain.

  16. Integrating out the Dirac sea

    Energy Technology Data Exchange (ETDEWEB)

    Karbstein, Felix

    2009-07-08

    We introduce a new method for dealing with fermionic quantum field theories amenable to a mean-field-type approximation. In this work we focus on the relativistic Hartree approximation. Our aim is to integrate out the Dirac sea and derive a no-sea effective theory'' with positive energy single particle states only. As the derivation of the no-sea effective theory involves only standard Feynman diagrams, our approach is quite general and not restricted to particular space-time dimensions. We develop and illustrate the approach in the ''large N'' limit of the Gross-Neveu model family in 1+1 dimensions. As the Gross-Neveu model has been intensely studied and several analytical solutions are known for this model, it is an ideal testing ground for our no-sea effective theory approach. The chiral Gross-Neveu model, also referred to as 1+1 dimensional Nambu-Jona-Lasinio model, turns out to be of particular interest. In this case, we explicitly derive a consistent effective theory featuring both elementary ''{pi} meson'' fields and (positive energy) ''quark'' fields, starting from a purely fermionic quantum field theory. In the second part of this work, we apply our approach to the Walecka model in 1+1 and 3+1 dimensions. As the Dirac sea caused considerable difficulties in attempts to base nuclear physics on field theoretic models like the Walecka model, mean-field calculations were typically done without the sea. We confront several of these mean-field theory results with our no-sea effective theory approach. The potential of our approach is twofold. While the no-sea effective theory can be utilized to provide new analytical insights in particular parameter regimes, it also sheds new light on more fundamental issues as the explicit emergence of effective, Dirac-sea induced multi-fermion interactions in an effective theory with positive energy states only. (orig.)

  17. Understanding the Amundsen Sea Low

    Science.gov (United States)

    McDonald, Adrian

    2016-04-01

    The Amundsen Sea Low (ASL) is a climatological low pressure system located between 170-300 ° E and 60-75°S and is a key component of the non-zonal climatological circulation at high southern latitudes. With reanalysis output identifying that climatologically the low in the Amundsen Sea is the deepest of three mean sea level pressure (MSLP) centres observed around Antarctica. The ASL strongly modulates West Antarctic climate with impacts on sea ice extent, temperature and precipitation, via its controlling influence on the variability of the meridional wind field. It has also been shown to have a significant influence on the atmospheric circulation in the Ross Sea region and to strongly modulate temperature and moisture advection over the Antarctic Peninsula. Previous work has demonstrated strong relationships between the depth of the ASL and cyclone densities in the region. However, interestingly a recent review identified that it is not easy to relate the storm density and depths of the cyclones to the climatological ASL, since the climatological location of the ASL does not occur at a clear maximum of storm activity. This study examines output from the ERA-interim reanalyses around Antarctica to further understand the contributors to the climatological pattern, partially in an effort to identify whether a more physically meaningful ASL depth index (normally simply defined as the monthly minimum MSLP) can be created. In this effort, storm track data derived from the ERA-Interim reanalysis and mean sea level pressure data bandpass filtered to accentuate synoptic scale variability are first examined. The contribution of persistent positive anomalies in the mean sea level pressure (defined as 8hPa positive anomalies from the climatological mean for a period of 5 days) in the region surrounding the Amundsen sea is also examined to identify whether blocking plays a role. Finally, the frequency of persistent negative anomalies (defined as a negative 8hPa occurring for

  18. Sea Ice Concentration and Extent

    Science.gov (United States)

    Comiso, Josefino C.

    2014-01-01

    Among the most seasonal and most dynamic parameters on the surface of the Earth is sea ice which at any one time covers about 3-6% of the planet. In the Northern Hemisphere, sea ice grows in extent from about 6 x 10(exp 6) sq km to 16 x 10(exp 6) sq km, while in the Southern Hemisphere, it grows from about 3 x 10(exp 6) sq km to about 19 x 10(exp 6) sq km (Comiso, 2010; Gloersen et al., 1992). Sea ice is up to about 2-3 m thick in the Northern Hemisphere and about 1 m thick in the Southern Hemisphere (Wadhams, 2002), and compared to the average ocean depth of about 3 km, it is a relatively thin, fragile sheet that can break due to waves and winds or melt due to upwelling of warm water. Being constantly advected by winds, waves, and currents, sea ice is very dynamic and usually follows the directions of the many gyres in the polar regions. Despite its vast expanse, the sea ice cover was previously left largely unstudied and it was only in recent years that we have understood its true impact and significance as related to the Earths climate, the oceans, and marine life.

  19. Sea Ice Concentration and Extent

    Science.gov (United States)

    Comiso, Josefino C.

    2014-01-01

    Among the most seasonal and most dynamic parameters on the surface of the Earth is sea ice which at any one time covers about 3-6% of the planet. In the Northern Hemisphere, sea ice grows in extent from about 6 x 10(exp 6) sq km to 16 x 10(exp 6) sq km, while in the Southern Hemisphere, it grows from about 3 x 10(exp 6) sq km to about 19 x 10(exp 6) sq km (Comiso, 2010; Gloersen et al., 1992). Sea ice is up to about 2-3 m thick in the Northern Hemisphere and about 1 m thick in the Southern Hemisphere (Wadhams, 2002), and compared to the average ocean depth of about 3 km, it is a relatively thin, fragile sheet that can break due to waves and winds or melt due to upwelling of warm water. Being constantly advected by winds, waves, and currents, sea ice is very dynamic and usually follows the directions of the many gyres in the polar regions. Despite its vast expanse, the sea ice cover was previously left largely unstudied and it was only in recent years that we have understood its true impact and significance as related to the Earths climate, the oceans, and marine life.

  20. Evidence of Brucella strain ST27 in bottlenose dolphin (Tursiops truncatus) in Europe.

    Science.gov (United States)

    Cvetnić, Željko; Duvnjak, Sanja; Đuras, Martina; Gomerčić, Tomislav; Reil, Irena; Zdelar-Tuk, Maja; Špičić, Silvio

    2016-11-30

    Marine mammal brucellosis has been known for more than 20 years, but recent work suggests it is more widespread than originally thought. Brucella (B.) pinnipedialis has been isolated from pinnipeds, while B. ceti strains have been associated with cetaceans. Here we report a Brucella strain isolated from multiple lymph nodes of one bottlenose dolphin (Tursiops truncatus) during routine examination of dolphin carcasses found in the Croatian part of the northern Adriatic Sea during the summer of 2015. Classical bacteriological biotyping, PCR-based techniques (single, multiplex, PCR-RFLP) and 16S rRNA DNA sequencing were used to identify Brucella spp. Multiple-locus variable number tandem repeat analysis of 16 loci and multilocus sequence typing of 9 loci were used for genotyping and species determination. The combination of bacteriological, molecular and genotyping techniques identified our strain as ST27, previously identified as a human pathogen. This report provides, to our knowledge, the first evidence of ST27 in the Adriatic Sea in particular and in European waters in general. The zoonotic nature of the strain and its presence in the Adriatic, which is inhabited by bottlenose dolphins, suggest that the strain may pose a significant threat to human health. Copyright © 2016 Elsevier B.V. All rights reserved.

  1. Iodine emissions from the sea ice of the Weddell Sea

    Directory of Open Access Journals (Sweden)

    H. M. Atkinson

    2012-05-01

    Full Text Available Iodine compounds were measured above, below and within the sea ice of the Weddell Sea during a cruise in 2009, to elucidate the mechanism of local enhancement and volatilisation of iodine. I2 mixing ratios of up to 12.4 pptv were measured 10 m above the sea ice, and up to 31 pptv was observed above surface snow on the nearby Brunt Ice Shelf – large amounts. Atmospheric IO of up to 7 pptv was measured from the ship, and the average sum of HOI and ICl was 1.9 pptv. These measurements confirm the Weddell Sea as an iodine hotspot. Average atmospheric concentrations of CH3I, C2H5I, CH2ICl, 2-C3H7I, CH2IBr and 1-C3H7I were each 0.2 pptv or less. On the Brunt Ice Shelf, enhanced concentrations of CH3I and C2H5I (up to 0.5 and 1 pptv, respectively were observed in firn air, with a diurnal profile that suggests the snow may be a source. In the sea ice brine, iodocarbons concentrations were over 10 times those of the sea water below. The sum of iodide + iodate was depleted in sea ice samples, suggesting some missing iodine chemistry. Flux calculations suggest I2 dominates the iodine atom flux to the atmosphere, but models cannot reconcile the observations and suggest either a missing iodine source or other deficiencies in our understanding of iodine chemistry. The observation of new particle formation, consistent with the model predictions, strongly suggests an iodine source. This combined study of iodine compounds is the first of its kind in this unique region of sea ice rich in biology and rich in iodine chemistry.

  2. Iodine emissions from the sea ice of the Weddell Sea

    Directory of Open Access Journals (Sweden)

    H. M. Atkinson

    2012-11-01

    Full Text Available Iodine compounds were measured above, below and within the sea ice of the Weddell Sea during a cruise in 2009, to make progress in elucidating the mechanism of local enhancement and volatilisation of iodine. I2 mixing ratios of up to 12.4 pptv were measured 10 m above the sea ice, and up to 31 pptv was observed above surface snow on the nearby Brunt Ice Shelf – large amounts. Atmospheric IO of up to 7 pptv was measured from the ship, and the average sum of HOI and ICl was 1.9 pptv. These measurements confirm the Weddell Sea as an iodine hotspot. Average atmospheric concentrations of CH3I, C2H5I, CH2ICl, 2-C3H7I, CH2IBr and 1-C3H7I were each 0.2 pptv or less. On the Brunt Ice Shelf, enhanced concentrations of CH3I and C2H5I (up to 0.5 and 1 pptv respectively were observed in firn air, with a diurnal profile that suggests the snow may be a source. In the sea ice brine, iodocarbons concentrations were over 10 times those of the sea water below. The sum of iodide + iodate was depleted in sea ice samples, suggesting some missing iodine chemistry. Flux calculations suggest I2 dominates the iodine atom flux to the atmosphere, but models cannot reconcile the observations and suggest either a missing iodine source or other deficiencies in our understanding of iodine chemistry. The observation of new particle formation, consistent with the model predictions, strongly suggests an iodine source. This combined study of iodine compounds is the first of its kind in this unique region of sea ice rich in biology and rich in iodine chemistry.

  3. [In vitro sensitivity of Mycobacterium chelonae strains to various antimicrobial agents].

    Science.gov (United States)

    Hernández García, A M; Arias, A; Felipe, A; Alvarez, R; Sierra, A

    1995-12-01

    The in vitro susceptibility of 32 Mycobacterium chelonae strains to 10 antimicrobial agents was determined. The sources of the different strains were: clinical samples from patients treated at the Hospital Universitario de Canarias and Hospital del Tórax (General and Chest facilities) and from environmental sources (water supply, sewage, swimming pools and the sea). The susceptibility tests were performed by a broth microdilution method (Mueller-Hinton Broth). The results showed amikacin as the most effective antimicrobial agent against M. chelonae isolates, then ofloxacin and cefoxitin. However no statistical difference was detected among them. The least effective was imipenem, followed by ciprofloxacin and norfloxacin.

  4. Alone by the Sea

    Directory of Open Access Journals (Sweden)

    Zoran Ferić

    2015-06-01

    Full Text Available 1.At first the island is just a sign on a yellow board with a drawing of a vessel and the letters saying “Car Ferry,” then it is a grayish silhouette in the blue of the sea, and then, later still, an acquaintance working on the ferry, who just nods briefly in greeting. Jablanac, ferry port, its pleasant lobby, and then, from the upper deck, a giant rock approaching. That is the object of a year-long desire: the moment of stepping off the boat and smelling the rosemary, diesel and sheep droppings, seeing the sharp rocks looking at the Strait of Senj, coarse limestone in sharp opposition to the signs that say: Benvenuti, Welcome, Willkommen!At home, on the terrace, in the shade of the oleander, there’s no wish to eat. Only swimming trunks are put on and then, barefoot, without a towel or sun-tanning lotion, off to the beach.“Why won’t you eat something?” grandma asks.She knows that there’s an exciting world waiting out there, but she knows nothing of the details. All friends went on a boat trip. And suddenly one step from the shade of a path covered with oleanders and acacias leads into the burning sun of the afternoon. The light screams, just like children in the water, just like white objects that radiate as if there are some powerful light bulbs within. The feeling of freedom of someone who has just arrived in a foreign place and can now do anything. There’s no one familiar on the beach, they all got in the boat and left. The seafront leading to the camp is full of people, naked children with dirty faces licking ice cream, young families pushing strollers, groups of teenagers who have just woken up from their last night’s party. But there’s no one that must be greeted. The feeling of freedom that’s at the same time close to death. Suddenly, all paths are open. That there are no obligations or friends waiting, this afternoon, until they come back, is a complete boon.

  5. Pigment signatures of some diatoms isolated from China seas

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    The photosynthetic pigments of 12 species (14 strains) of cultured diatoms from six genera under specific conditions were examined by the HPLC. The diatom genera were Skeletonema, Thalassiosira, Chaetoceros, Nitzschia, Phaeodactylum and Meuniera. All strains were isolated from China seas and most of them were from the Jiaozhou Bay, China. Fifteen pigments were identified and eight of them were various chlorophyll a derivatives. Chlorophyll a, c2 and c1 and the carotenoids fucoxanthin, diadinoxanthin, diatoxanthin and β,β-carotene existed in all species. The ratios of each pigment to chlorophyll a were compared with the results in literatures. The pigment ratios of this study generally fall within the ranges reported by the literatures although the maximum ratio of fucoxanthin to chlorophyll a was higher and the ratios of chlorophyll c and diatoxanthin to chlorophyll a were low. The pigment ratios are useful to understanding the pigment signatures of diatoms in the Jiaozhou Bay, China, and to setting up the chemotaxonomic method ofphytoplankton in these sea areas.

  6. On The Black Sea Surozhian

    Science.gov (United States)

    Caraivan, Glicherie; Corneliu, Cerchia

    2016-04-01

    Some Black Sea researchers still support the idea of no other connection to the Mediterranean Sea between LGM and Karangatian Stage (Riss - Wurm). We try to clarify the source of these disagreements. C14 AMS age data (HERAS Project) made on undisturbed samples from a new Mamaia drilling hole where compared with the classical Black Sea stratigraphic schemes. A first transgressive event (Zone D) is found between 38.00 - 20.20 m depth. Zone D4 shows a fairly rapid rise of sea level, about 10 m below the present one indicating an inner shelf marine polyhaline environment. AMS age data show 14C ages between 53690 - 47359 y (MIS 1), corresponding to the "Surozhian Beds" of Popov. The "beach rock" from Zone E marks the decrease of the sea level after the maximum reached in Zone D4. Zone E mollusc shells AMS data, indicate 14C ages of 48724 - 44604 y, suggesting a long-time reworked material from the previous D4 zone sediments, and represents the beginning of the "regressive Tarkankutian" sequence.The Last Glacial Maximum (LGM) led to the retreat of the sea level down to about 100 m below the current one (27-17 ky BP), followed by an retreat of the shoreline to the present position. At the beginning of the Holocene - MIS 1 (8408-8132 cal. y BP), Black Sea brackish water level grew rapidly, up to -14 m below the present one (Zone F: 22, 57-20, 20 m). Zone F deposits could be correlated with the Bugazian strata. Then, a continuous rising of the Black Sea level is recorded up to a maximum of -2 m under the present one, about 6789 - 7063 cal. y BP, when a transgressive spurt ("Neolithic transgression") may have taken place. After that, given a weak Danubian sedimentary input, coastal erosion intensified. The coarse sandy sediments were reworked and pushed over the previous peat deposits, and suggest a classical "sedimentary regression", not a sea-level decrease. During the last 1.5 ky, sea level has risen towards the current one. Previous C14 dates from "Karangatian

  7. Vulnerability of marginal seas to sea level rise

    Science.gov (United States)

    Gomis, Damia; Jordà, Gabriel

    2017-04-01

    Sea level rise (SLR) is a serious thread for coastal areas and has a potential negative impact on society and economy. SLR can lead for instance to land loss, beach reduction, increase of the damage of marine storms on coastal infrastructures and to the salinization of underground water streams. It is well acknowledged that future SLR will be inhomogeneous across the globe, with regional differences of up to 100% with respect to global mean sea level (GMSL). Several studies have addressed the projections of SLR at regional scale, but most of them are based on global climate models (GCMs) that have a relatively coarse spatial resolution (>1°). In marginal seas this has proven to be a strong limitation, as their particular configurations require spatial resolutions that are not reachable by present GCMs. A paradigmatic case is the Mediterranean Sea, connected to the global ocean through the Strait of Gibraltar, a narrow passage of 14 km width. The functioning of the Mediterranean Sea involves a variety of processes including an overturning circulation, small-scale convection and a rich mesoscale field. Moreover, the long-term evolution of Mediterranean sea level has been significantly different from the global mean during the last decades. The observations of present climate and the projections for the next decades have lead some authors to hypothesize that the particular characteristics of the basin could allow Mediterranean mean sea level to evolve differently from the global mean. Assessing this point is essential to undertake proper adaptation strategies for the largely populated Mediterranean coastal areas. In this work we apply a new approach that combines regional and global projections to analyse future SLR. In a first step we focus on the quantification of the expected departures of future Mediterranean sea level from GMSL evolution and on the contribution of different processes to these departures. As a result we find that, in spite of its particularities

  8. GHRSST Level 4 DMI_OI North Sea and Baltic Sea Regional Foundation Sea Surface Temperature Analysis (GDS version 1)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A Group for High Resolution Sea Surface Temperature (GHRSST) Level 4 sea surface temperature analysis produced daily on an operational basis by the Danish...

  9. Geometrical constraints on the evolution of ridged sea ice

    Science.gov (United States)

    Amundrud, Trisha L.; Melling, Humfrey; Ingram, R. Grant

    2004-06-01

    A numerical model of the evolving draft distribution of seasonal pack ice is driven by freezing and ice field compression in one dimension. Spatial transects of sea ice draft acquired during winter in the Beaufort Sea are used to evaluate the model. Histograms obtained by ice-profiling sonar on subsea moorings reveal changes in the draft distribution, while observations of ice velocity by Doppler sonar allow calculation of the strain to which the draft distribution is responding. Numerical diffusion in thermal ice growth is controlled using a remapping algorithm. Mechanical redistribution algorithms in common use generate much more deep ridged ice than is observed. Geometric constraints on ridge-keel development that reflect the finite extent of level floes available for ridge building and the true average shape of keels produce more realistic results. In the seasonal pack ice of the Beaufort Sea, 75% of all floes are too small to provide a volume of ice sufficient to construct a keel of draft equal to that commonly assumed in ice dynamics modeling. On average, the distribution of draft within keels has a negative exponential form, implying a cusped keel shape with more area on the thinner flanks than at the crest; models commonly assume a uniform redistribution of ice into a keel of triangular shape. Clearly, the spatial organization of ice within seasonal pack or, equivalently, the existence of ridges and floes should be an acknowledged factor in redistribution theory for pack ice thickness.

  10. How SEA can inform lenders

    DEFF Research Database (Denmark)

    Banhalmi-Zakar, Zsuzsa; Larsen, Sanne Vammen

    SEA can be a powerful tool to improve decision-making for plans, policies and programmes, but it can also be a useful for banks. SEA can help lenders address the reputational risks they are exposed to through financing projects that may have a negative impact on the environment and it can also help...... with identifying the financial incentives that ‘green’ projects attract. Although bank lending decisions apply to projects, examination of the lending practices of an Australian and a Hungarian bank have shown that decisions about the type of projects to target or avoid are also made at strategic level......, such as in the credit policies. It was also found that in some cases lenders become involved in project planning at a very early stage, when projects are conceptualized, and certainly before formal approval is sought from relevant authorities and an EIA is conducted. This suggests that SEA can be a useful tool...

  11. Coccidioidomycosis in southern sea otters

    Science.gov (United States)

    Thomas, Nancy J.; Pappagianis, Demosthenes; Creekmore, Lynn H.; Duncan, Ruth M.

    1994-01-01

    Disseminated coccidioidomycosis was diagnosed postmortem in six southern sea otters (Enhydra lutris nereis) found dying or dead along the Pacific Coast of California at San Luis Obispo County.  These otters were found during winter or summer 1992, 1993, and 1994.  Coccidioides immitis was identified by its morphology in tissue impression smears and by histopathology, and was confirmed by culture.  Positive serologic results were obtained from four of five sea otters tested.  The lungs, pleura, tracheobronchial lymph nodes, liver, and spleen were involved in each case.  There was meningeal involvement in half of the affected animals.  Coccidioidomycosis has been reported in a wild sea otter only once previously, in 1976, and that otter was also found on the coast of San Luis Obispo County.

  12. Mapping the deep sea floor

    DEFF Research Database (Denmark)

    Nielsen, Kristian Hvidtfelt

    By the early 20th century, oceanographers intensified their efforts to map the deep sea. The great depth of the Philippine Trench was first observed by the German Planet Expedition in 1912. During World War II, the US naval vessel Cape Johnson used directional echo-sounding to obtain a depth of 10......,497 m. In 1951, the Danish Galathea Deep Sea Expedition from 1950 to 1952 verified the result of the Cape Johnson sounding. Today, the greatest depth in the Philippine Trench is the Galathea Depth of 10,540 m. The Galathea Expedition produced several echograms of the deepest parts of the Philippine...... Trench in order to map its bathymetric features. The resulting maps are presented in this poster. Unlike many other contemporary developments in deep sea topography and cartography that were shaped by the Cold War, the Galathea maps of the Philippine Trench were intimately connected with the expedition...

  13. EXPERIMENTS OF SEA ICE SIMULATION

    Institute of Scientific and Technical Information of China (English)

    LIU Xi-ying; ZHANG Xue-hong; YU Ru-cong; LIU Hai-long; YU Yong-qiang

    2005-01-01

    As a substitute for the original displaced pole grids, a simple rotated spherical coordinate system was introduced into the Community Sea Ice Model version 4(CSIM4), which is a component of the Community Climate System Model(CCSM) of the American National Center of Atmospheric Research(NCAR), to deal with the "pole problems".In the new coordinates, both the geographical North Pole and South Pole lie in the model equator and grid sizes near the polar region are more uniform.With reanalysis dataset of American National Centers for Environment Prediction(NCEP) and Levitus dataset without considering sub-mixed layer heat flux, the model was integrated for 100 years with thermodynamics process involved only in the former 49 years and both dynamic and thermodynamic processes involved in the left time.Inner consistency of model results was checked with no contradiction found.The results of last 10 years' model output were analyzed and it is shown that the simulated sea ice seasonal variation is rational whereas sea ice extent in the Barents Sea in winter is larger than that of observation.Numerical experiment on influence of sub-mixed layer heat flux was also carried out and it is shown that the sub-mixed layer heat flux can modulate seasonal variation of sea ice greatly.As a model component, the sea ice model with rotated spherical coordinates was coupled with other models (the oceanic general circulation model is the LASG/IAP Climate System Ocean Model(LICOM) with reduced grid, other models are components of NCAR CCSM2) forming a climate system model and its preliminary results were also given briefly.

  14. The non-tidal loading by the Baltic Sea can be detected in GNSS coordinate time series

    Science.gov (United States)

    Virtanen, J. V.; Nordman, M.; Virtanen, H.; Nyberg, S.; Makinen, J.

    2013-12-01

    The Baltic Sea is a well-monitored semi-enclosed sea in northern Europe. The tides in the Baltic Sea are minute and variation in the mass distribution of the sea is mostly caused by atmospheric pressure changes and wind. The same factors also control the so-called fill level of the Baltic, i.e., the amount of water exchange with the North Sea. The variation in the sea level can be abrupt and large, for example during storms. The variable load causes significant effects in geodetic measurements, especially near the coastline. Unlike tidal ocean loading, non-tidal ocean loading is so far not routinely corrected for in geodetic measurements. We have computed the time series of non-tidal loading due to Baltic Sea at 193 geodetic stations in northern Europe, for all the main geodetic observables: 3-D position, gravity, tilt and strain. For this we have used hourly observations of the sea level at the tide gauges of the Baltic Operational Oceanographic Service (BOOS, http://boos.org), to estimate the momentary sea level over the whole basin of the Baltic Sea. These sea level models are then convolved with Green's functions using the program SPOTL (Agnew, 2012, http://escholarship.org/uc/item/954322pg). The time period is four years, February 2008 to February 2012. The time series can be used for several purposes, e.g. for the studies of other error sources, to create stable time series and also to correct campaign measurements, which take place in varying conditions. Here we concentrate on the computed 3-D deformation. We compare it with daily GPS coordinate time series, both from precise point positioning and from double-difference solutions. Both vertical and horizontal deformation due to the Baltic loading can be detected in the GPS time series. The standard deviation of time series of coordinate differences are reduced by up to 30% when the loading is corrected for.

  15. Black Sea coastal forecasting system

    Directory of Open Access Journals (Sweden)

    A. I. Kubryakov

    2012-03-01

    Full Text Available The Black Sea coastal nowcasting and forecasting system was built within the framework of EU FP6 ECOOP (European COastalshelf sea OPerational observing and forecasting system project for five regions: the south-western basin along the coasts of Bulgaria and Turkey, the north-western shelf along the Romanian and Ukrainian coasts, coastal zone around of the Crimea peninsula, the north-eastern Russian coastal zone and the coastal zone of Georgia. The system operates in the real-time mode during the ECOOP project and afterwards. The forecasts include temperature, salinity and current velocity fields. Ecosystem model operates in the off-line mode near the Crimea coast.

  16. Sailing In Sea of Commerce

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The law of big fish swallowing little fish has expired when it comes to the era of new economy.What prevails nowadays in the sea of commerce is quick fish swallowing slow fish.In the Internet economy,small companies are not destined to lose to giants,but slow ones are doomed to become prey of their quick counterparts. The swiftly rising Yongkang Group has made a breakthrough in dental treatment by translating the law into practice.It is called"Law of the Sea."‘Law of the Sea’

  17. [Resistance of microorganisms of coastal ecosystems of the Dead Sea to extremal factors].

    Science.gov (United States)

    Romanovskaia, V A; Avdeeva, L V; Gladka, G V; Pritula, I R; Kharkhota, M A; Tashirev, A B

    2013-01-01

    Such extreme factors as UV radiation, high temperature and salinity, and also the small amount of accessible water have an influence on microorganisms of coastal ecosystems of the Dead Sea. Resistance to these factors of the microorganisms isolated from ecosystems of this region (vertical steep gorge around the Dead Sea, clay-salt plain and black highly mineralized muds) is studied. Aerobic, chemoorganotrophic, thermotolerant, moderately halophilic bacteria which, according to their morphological and physiological properties, are similar to species Gracilibacillus halotolerans, Salimicrobium album and genus Caryophanon have been isolated from these ecosystems. All strains grew at 0-10% of NaCl in the medium (one strain--at 15% of NaCl), in the range of 30-50 degrees C. Resistance to UV radiation has been revealed in all the investigated bacteria Lethal doses of UV (LD90 and LD99.99) for spore-forming strains of genus Gracilibacillus were 100-170 and 1100-1500 J/m2, respectively; for strain Salimicrobium 6t1 (does not form spores)--70 and 400 J/m2; for the strain lt4 (genus Caryophanon), forming filamentous (or trychomes)--150 and 1400 J/m2. Some strains of genus Gracilibacillus had strong antagonistic effect on conditionally pathogenic test cultures Staphylococcus aureus 209p and Candida albicans UCM Y-690. It is conceivable that resistance of microorganisms of coastal ecosystems of the Dead Sea to extreme factors was generated under the influence of abiotic (physical and chemical) factors typical of this region.

  18. Temperature, salinity, and nutrients data collected from North Atlantic Ocean, White Sea, Mediterranean Sea, Black Sea, and Sea of Azov from 1924-03-19 to 1989-11-19 by multiple Soviet Union institutes (NODC Accession 0077413)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Temperature, salinity, and nutrients data collected from North Atlantic Ocean, White Sea, Mediterranean Sea, Black Sea, and Sea of Azov from 1924-03-19 to 1989-11-19...

  19. Effective Hamiltonian of strained graphene.

    Science.gov (United States)

    Linnik, T L

    2012-05-23

    Based on the symmetry properties of the graphene lattice, we derive the effective Hamiltonian of graphene under spatially nonuniform acoustic and optical strains. Comparison with the published results of the first-principles calculations allows us to determine the values of some Hamiltonian parameters, and suggests the validity of the derived Hamiltonian for acoustical strain up to 10%. The results are generalized for the case of graphene with broken plane reflection symmetry, which corresponds, for example, to the case of graphene placed on a substrate. Here, essential modifications to the Hamiltonian give rise, in particular, to the gap opening in the spectrum in the presence of the out-of-plane component of optical strain, which is shown to be due to the lifting of the sublattice symmetry. The developed effective Hamiltonian can be used as a convenient tool for analysis of a variety of strain-related effects, including electron-phonon interaction or pseudo-magnetic fields induced by the nonuniform strain.

  20. Rotation and strain rate of Sulawesi from geometrical velocity field

    Science.gov (United States)

    Sarsito, D. A.; Susilo, Simons, W. J. F.; Abidin, H. Z.; Sapiie, B.; Triyoso, W.; Andreas, H.

    2017-07-01

    One of methods that can be used to determine the tectonic deformation status is rate estimation from geometric rotation and strain using quantitative velocity data from GPS observations. Microplate Sulawesi region located in the zone of triple junction (Eurasia, Australia and Philippine Sea Plates) has very complex tectonic and seismic condition, which is why become very important to know its recent deformation status in order to study neo-tectonic and disaster mitigation. Deformation rate quantification is estimated in two parameters: rotation and geodetic strain rate of each GPS station Delaunay triangle in the study area. The analysis in this study is not done using the grids since there is no rheological information at location that can be used as the interpolation-extrapolation constraints. Our analysis reveals that Sulawesi is characterized by rapid rotation in several different domains and compression-strain pattern that varies depending on the type and boundary conditions of microplate. This information is useful for studying neo tectonic deformation status and earthquake disaster mitigation.

  1. 2010 USGS Lidar: Salton Sea (CA)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The USGS Salton Sea project encompasses a 5-kilometer buffer around the Salton Sea, California. Dewberry classified LiDAR for a project boundary that touches 623...

  2. Extended Reconstructed Sea Surface Temperature (ERSST)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Extended Reconstructed Sea Surface Temperature (ERSST) dataset is a global monthly sea surface temperature analysis derived from the International Comprehensive...

  3. Erective Sea Embankment with PCC Piles

    Institute of Scientific and Technical Information of China (English)

    LIU Han-long; FEI Kang; DENG An; ZHANG Ting

    2005-01-01

    The sea embankment is a critical civil works in marine and coastal engineering. In this study, an innovative technique is proposed for constructing erective sea embankments. In the construction of sea embankments, this technique integrates PCC pile installation, PVDs drainage systems, and geotextile reinforcements, resulting in sea embankments with PCC piles. In the application of a sea embankment with PCC piles, PCC piles are employed as the retaining structures;the soft sea ground inside PCC piles is drained and improved by PVDs and vacuum-surcharge combined preloading; geotextile-reinforced backfills lying over the improved soft ground form the embankment body. Brief descrptions of the fundamentals, design and construction of the sea embankment with PCC piles are presented. A case study on the stability of sea embankment with PCC piles is presented as well.

  4. Range Extent for southern sea otters 2016

    Data.gov (United States)

    U.S. Geological Survey, Department of the Interior — The GIS shapefile "Range extent of southern sea otters 2016" is a simple polyline representing the geographic distribution of the southern sea otter (Enhydra lutris...

  5. Biogeochemistry of iron in the Arabian sea

    Digital Repository Service at National Institute of Oceanography (India)

    Moffett, J.W.; Vedamati, J.; Goepfert, T.J.; Pratihary, A.K.; Gauns, M.; Naqvi, S.W.A.

    The Arabian Sea is a productive basin where seasonal upwelling and convective mixing result in high surface nutrient concentrations and widespread algal blooms. The factors controlling primary productivity in the Arabian Sea are of interest because...

  6. Quarterly Fishery Surveys - Salton Sea [ds428

    Data.gov (United States)

    California Department of Resources — In the spring of 2003, California Department of Fish and Game (CDFG) personnel began quarterly sampling of Salton Sea fish at fourteen stations around the sea, as...

  7. Implementing the European SEA Directive in planning

    DEFF Research Database (Denmark)

    Kørnøv, Lone

    The paper describes how the European SEA Directive can complement the existing planning practice in Denmark.......The paper describes how the European SEA Directive can complement the existing planning practice in Denmark....

  8. Sea turtles sightings in North Carolina

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Sea turtles sightings are reported to the NMFS Beaufort Laboratory sea turtle program by the general public as they are fishing, boating, etc. These sightings...

  9. Actinomycetes from the South China Sea sponges: isolation, diversity and potential for aromatic polyketides discovery

    Directory of Open Access Journals (Sweden)

    Zhiyong eLi

    2015-10-01

    Full Text Available Marine sponges often harbor dense and diverse microbial communities including actinobacteria. To date no comprehensive investigation has been performed on the culturable diversity of the actinomycetes associated with South China Sea sponges. Structurally novel aromatic polyketides were recently discovered from marine sponge-derived Streptomyces and Saccharopolyspora strains, suggesting that sponge-associated actinomycetes can serve as a new source of aromatic polyketides. In this study, a total of 77 actinomycete strains were isolated from 15 South China Sea sponge species. Phylogenetic characterization of the isolates based on 16S rRNA gene sequencing supported their assignment to 12 families and 20 genera, among which three rare genera (Marihabitans, Polymorphospora and Streptomonospora were isolated from marine sponges for the first time. Subsequently, β-ketoacyl synthase (KSα gene was used as marker for evaluating the potential of the actinomycete strains to produce aromatic polyketides. As a result, KSα gene was detected in 35 isolates related to 7 genera (Kocuria, Micromonospora, Nocardia, Nocardiopsis, Saccharopolyspora, Salinispora and Streptomyces. Finally, ten strains were selected for small-scale fermentation, and one angucycline compound was detected from the culture extract of Streptomyces anulatus strain S71. This study advanced our knowledge of the sponge-associated actinomycetes regarding their diversity and potential in producing aromatic polyketides.

  10. Actinomycetes from the South China Sea sponges: isolation, diversity, and potential for aromatic polyketides discovery

    Science.gov (United States)

    Sun, Wei; Zhang, Fengli; He, Liming; Karthik, Loganathan; Li, Zhiyong

    2015-01-01

    Marine sponges often harbor dense and diverse microbial communities including actinobacteria. To date no comprehensive investigation has been performed on the culturable diversity of the actinomycetes associated with South China Sea sponges. Structurally novel aromatic polyketides were recently discovered from marine sponge-derived Streptomyces and Saccharopolyspora strains, suggesting that sponge-associated actinomycetes can serve as a new source of aromatic polyketides. In this study, a total of 77 actinomycete strains were isolated from 15 South China Sea sponge species. Phylogenetic characterization of the isolates based on 16S rRNA gene sequencing supported their assignment to 12 families and 20 genera, among which three rare genera (Marihabitans, Polymorphospora, and Streptomonospora) were isolated from marine sponges for the first time. Subsequently, β-ketoacyl synthase (KSα) gene was used as marker for evaluating the potential of the actinomycete strains to produce aromatic polyketides. As a result, KSα gene was detected in 35 isolates related to seven genera (Kocuria, Micromonospora, Nocardia, Nocardiopsis, Saccharopolyspora, Salinispora, and Streptomyces). Finally, 10 strains were selected for small-scale fermentation, and one angucycline compound was detected from the culture extract of Streptomyces anulatus strain S71. This study advanced our knowledge of the sponge-associated actinomycetes regarding their diversity and potential in producing aromatic polyketides. PMID:26483773

  11. Antimicrobial and antistaphylococcal biofilm activity from the sea urchin Paracentrotus lividus

    DEFF Research Database (Denmark)

    Schillaci, D.; Arizza, V.; Parrinello, N.

    2010-01-01

    Aims: Staphylococcal biofilm-associated infections are resistant to conventional antibiotics. Consequently, new agents are needed to treat them. With this aim, we focused on the effector cells (coelomocytes) of the sea urchin Paracentrotus lividus immune system. Methods and Results: We tested...... and antibiofilm properties of 5-CC against staphylococcal biofilms of reference strains Staphylococcus epidermidis DSM 3269 and Staphylococcus aureus ATCC 29213. The antimicrobial efficacy of 5-CC against the biofilms of clinical strain Staph. epidermidis 1457 was also tested using live/dead staining...

  12. 50 CFR 697.12 - At-sea sea sampler/observer coverage.

    Science.gov (United States)

    2010-10-01

    ... ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) ATLANTIC COASTAL FISHERIES COOPERATIVE... must: (1) Notify the sea sampler/observer of any sea turtles, marine mammals, or other specimens taken by the vessel. (2) Provide the sea sampler/observer with sea turtles, marine mammals, or...

  13. Estimating sea floor dynamics in the Southern North Sea to improve bathymetric survey planning

    NARCIS (Netherlands)

    Dorst, Leendert Louis

    2009-01-01

    Safe nautical charts require a carefully designed bathymetric survey policy, especially in shallow sandy seas that potentially have dynamic sea floor patterns. Bathymetric resurveying at sea is a costly process with limited resources, though. A pattern on the sea floor known as tidal sand waves is c

  14. Multiscale Models of Melting Arctic Sea Ice

    Science.gov (United States)

    2014-09-30

    1 Multiscale Models of Melting Arctic Sea Ice Kenneth M. Golden University of Utah, Department of Mathematics phone: (801) 581-6851...feedback has played a major role in the recent declines of the summer Arctic sea ice pack. However, understanding the evolution of melt ponds and sea...Models of Melting Arctic Sea Ice 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) 5d. PROJECT NUMBER 5e. TASK NUMBER

  15. Intergranular strains in textured steel

    Energy Technology Data Exchange (ETDEWEB)

    Daymond, M.R. [Los Alamos Neutron Science Center (LANSCE), Los Alamos, NM (United States); Tome, C.N. [Los Alamos National Lab., NM (United States). Materials Science and Technology Div.; Bourke, M.A.M. [Los Alamos Neutron Science Center (LANSCE), Los Alamos, NM (United States); Los Alamos National Lab., NM (United States). Materials Science and Technology Div.

    2000-07-01

    Tensile specimens were machined from heat treated austenitic stainless steel plate prior to and after 70% reduction by uni-directional rolling. In addition to a specimen from the as-received plate, two specimens were cut from the rolled plate, with axes parallel and perpendicular to the rolling direction respectively. In situ measurements of the strain response of multiple hkl lattice planes to an applied uniaxial tensile load were made using neutron diffraction. The experimental results are compared with predictions from a self-consistent Hill-Hutchinson model. The measured texture in the plate was approximately 3 times random, however its effect on the hkl response was small compared to the residual strains left by rolling. The apparent elastic modulus and Poisson's ratios of the planes is affected by the residual strains, which is attributed to the effect of micro-plasticity. Interpretation of residual stress measurements is considered in light of these results. (orig.)

  16. Strain Growth in Containment Vessels

    Institute of Scientific and Technical Information of China (English)

    DONG Q; LI Q M; ZHENG J Y

    2006-01-01

    Strain growth is a phenomenon observed in containment vessels subjected to internal blast loading.The elastic response of the vessel may become larger in a later stage compared to its response during the initial stage.The dynamic responses of infinitely long cylindrical containment vessels subjected to uniformly-distributed internal blast loading are studied using LS-DYNA.The development of bending modes and the interaction between the breathing mode and bending modes are observed.The methodology developed for dynamic elastic buckling analysis is employed to study the strain growth phenomenon in explosion containment vessels.It is shown that the dynamic instable vibration of a containment vessel is the basic mechanism of strain growth.

  17. Infection of California sea lions (Zalophus californianus) with terrestrial Brucella spp.

    Science.gov (United States)

    Avalos-Téllez, Rosalía; Ramírez-Pfeiffer, Carlos; Hernández-Castro, Rigoberto; Díaz-Aparicio, Efrén; Sánchez-Domínguez, Carlos; Zavala-Norzagaray, Alan; Arellano-Reynoso, Beatriz; Suárez-Güemes, Francisco; Aguirre, A Alonso; Aurioles-Gamboa, David

    2014-10-01

    Infections with Brucella ceti and pinnipedialis are prevalent in marine mammals worldwide. A total of 22 California sea lions (Zalophus californianus) were examined to determine their exposure to Brucella spp. at San Esteban Island in the Gulf of California, Mexico, in June and July 2011. Although samples of blood, vaginal mucus and milk cultured negative for these bacteria, the application of rose Bengal, agar gel immunodiffusion, PCR and modified fluorescence polarization assays found that five animals (22.7%) had evidence of exposure to Brucella strains. The data also suggested that in two of these five sea lions the strains involved were of terrestrial origin, a novel finding in marine mammals. Further work will be required to validate and determine the epidemiological significance of this finding.

  18. The first isolation of a cyanophage-Synechococcus system from the East China Sea.

    Science.gov (United States)

    Zhang, Yan; Xu, Min; Zhao, Yijun; Cheng, Kai

    2013-10-01

    A cyanophage strain and its host Synechococcus were isolated from the East China Sea. The host Synechococcus sp. SJ01 was characterized by its 16S rRNA, ITS, and psbA gene sequences as well as by its morphological appearance and pigmentation. The cyanophage, strain S-SJ2, was able to cause a lytic infection of the coastal Synechococcus. TEM of negative-stained specimens showed that the phage isolate has an isometric head with a diameter of 68 nm and a long tail with a length of 280 nm. The cyanophage-Synechococcus system from the East China Sea shares many properties with other marine cyanophage-Synechococcus systems worldwide.

  19. [Multiple scattering of visible and infrared light by sea fog over wind driving rough sea surface].

    Science.gov (United States)

    Sun, Xian-Ming; Wang, Hai-Hua; Lei, Cheng-Xin; Shen, Jin

    2013-08-01

    The present paper is concerned with computing the multiple scattering characteristics of a sea fog-sea surface couple system within this context. The single scattering characteristics of sea fog were studied by Mie theory, and the multiple scattering of sunlight by single sea fog layer was studied by radiative transfer theory. The reflection function of a statistically rough ocean surface was obtained using the standard Kirchhoff formulation, with shadowing effects taken into account. The reflection properties of the combined sea fog and ocean surface were obtained employing the adding method, and the results indicated that the reflected light intensity of sea fog increased with the sea background.

  20. Increased CO2 uptake due to sea ice growth and decay in the Nordic Seas

    DEFF Research Database (Denmark)

    Rysgaard, Søren; Bendtsen, Jørgen; Petersen, L.T.

    2009-01-01

    uptake in the Nordic Seas is currently unknown. We present evidence from 50 localities in the Arctic Ocean that dissolved inorganic carbon is rejected together with brine from growing sea ice and that sea ice melting during summer is rich in carbonates. Model calculations show that melting of sea ice......The uptake rates of atmospheric CO2 in the Nordic Seas are among the highest in the world's oceans. This has been ascribed mainly to a strong biological drawdown, but chemical processes within the sea ice itself have also been suggested to play a role. The importance of sea ice for the carbon...

  1. India and the South China Sea Dispute

    Institute of Scientific and Technical Information of China (English)

    Ma Jiali

    2012-01-01

    South China Sea is a sea area of great significance. It lies between the Pacific and Indian Oceans, a crucial waterway bridging East Asia, Southeast Asia and South Asia. In general, South China Sea is a rich deposit of oil and fishing resources, a transportation hub of strategic importance, and an important buffer zone to safeguard China's maritime rights and interests.

  2. Messinian events in the Black Sea

    NARCIS (Netherlands)

    van Baak, Christiaan G C; Radionova, Eleanora P.; Golovina, Larisa A.; Raffi, Isabella; Kuiper, Klaudia F.; Vasiliev, Iuliana; Krijgsman, Wout

    2015-01-01

    Past hydrological interactions between the Mediterranean Sea and Black Sea are poorly resolved due to complications in establishing a high-resolution time frame for the Black Sea. We present a new greigite-based magnetostratigraphic age model for the Mio-Pliocene deposits of DSDP Hole 380/380A,

  3. 33 CFR 2.22 - Territorial sea.

    Science.gov (United States)

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Territorial sea. 2.22 Section 2... Jurisdictional Terms § 2.22 Territorial sea. (a) With respect to the United States, the following apply— (1) Territorial sea means the waters, 12 nautical miles wide, adjacent to the coast of the United States...

  4. Biogeographic classification of the Caspian Sea

    DEFF Research Database (Denmark)

    Fendereski, F.; Vogt, M.; Payne, Mark

    2014-01-01

    using the Hierarchical Agglomerative Clustering (HAC) method. From an initial set of 12 potential physical variables, 6 independent variables were selected for the classification algorithm, i.e., sea surface temperature (SST), bathymetry, sea ice, seasonal variation of sea surface salinity (DSSS), total...... confirms the relevance of the ecoregions as proxies for habitats with common biological characteristics....

  5. 50 CFR 223.205 - Sea turtles.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 7 2010-10-01 2010-10-01 false Sea turtles. 223.205 Section 223.205... Threatened Marine and Anadromous Species § 223.205 Sea turtles. (a) The prohibitions of section 9 of the Act (16 U.S.C. 1538) relating to endangered species apply to threatened species of sea turtle, except...

  6. Parasites in the Wadden Sea food web

    NARCIS (Netherlands)

    Thieltges, D.W.; Engelsma, M.Y.; Wendling, C.C.; Wegner, M.

    2013-01-01

    While the free-living fauna of the Wadden Sea has received much interest, little is known on the distribution and effects of parasites in the Wadden Sea food web. However, recent studies on this special type of trophic interaction indicate a high diversity of parasites in the Wadden Sea and suggest

  7. Redescription of the sea anemone Bunodeopsis Pelagica

    NARCIS (Netherlands)

    Fisher, Elaine

    1976-01-01

    There are two species of sea anemone occurring on the floating sea weed Sargassum natans in the Caribbean sea: Bunodeopsis pelagica (Quoy & Gaimard) and Anemonia sargassensis Hargitt. The anemones are readily distinguished from one another by their colour and the nature of their tentacles. B.

  8. Parasites in the Wadden Sea food web

    NARCIS (Netherlands)

    Thieltges, D.W.; Engelsma, M.Y.; Wendling, C.C.; Wegner, K.M.

    2013-01-01

    While the free-living fauna of the Wadden Sea has received much interest, little is known on the distribution and effects of parasites in the Wadden Sea food web. However, recent studies on this special type of trophic interaction indicate a high diversity of parasites in the Wadden Sea and suggest

  9. OW NASA SeaWIFS Ocean Color

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The dataset contains satellite-derived sea-surface ocean color (chlorophyll-a) measurements collected by means of the Sea-viewing Wide Field-of-view Sensor (SeaWiFS)...

  10. Laterally transferred elements and high pressure adaptation in Photobacterium profundum strains

    Directory of Open Access Journals (Sweden)

    Malacrida Giorgio

    2005-09-01

    Full Text Available Abstract Background Oceans cover approximately 70% of the Earth's surface with an average depth of 3800 m and a pressure of 38 MPa, thus a large part of the biosphere is occupied by high pressure environments. Piezophilic (pressure-loving organisms are adapted to deep-sea life and grow optimally at pressures higher than 0.1 MPa. To better understand high pressure adaptation from a genomic point of view three different Photobacterium profundum strains were compared. Using the sequenced piezophile P. profundum strain SS9 as a reference, microarray technology was used to identify the genomic regions missing in two other strains: a pressure adapted strain (named DSJ4 and a pressure-sensitive strain (named 3TCK. Finally, the transcriptome of SS9 grown under different pressure (28 MPa; 45 MPa and temperature (4°C; 16°C conditions was analyzed taking into consideration the differentially expressed genes belonging to the flexible gene pool. Results These studies indicated the presence of a large flexible gene pool in SS9 characterized by various horizontally acquired elements. This was verified by extensive analysis of GC content, codon usage and genomic signature of the SS9 genome. 171 open reading frames (ORFs were found to be specifically absent or highly divergent in the piezosensitive strain, but present in the two piezophilic strains. Among these genes, six were found to also be up-regulated by high pressure. Conclusion These data provide information on horizontal gene flow in the deep sea, provide additional details of P. profundum genome expression patterns and suggest genes which could perform critical functions for abyssal survival, including perhaps high pressure growth.

  11. [Comparative analysis of sea-ice diatom species composition in the seas of Russian Arctic].

    Science.gov (United States)

    Il'iash, L V; Zhitina, L S

    2009-01-01

    Comparative analysis of species composition of ice diatom algae (IDA) of the White, Barents, Kara, Laptev, East Siberian, Chukchi Seas and the Basin of the Arctic Ocean was conducted on the basis of both original and published data. Species composition of IDA counts 567 taxa including 122 centric and 446 pennate diatoms. The freshwater algae composed about 18% of the total species number. In the White Sea, IDA were the most numerous (272 taxa), in the Kara Sea they are the least numerous (57 taxa). The species compositions in different seas differ significantly from each other. Similarity of IDA was consistent with the Arctic Ocean circulation and ice drift. IDA of Chukchi, East Siberian and Laptev Seas are the most similar, as are IDA of White and Kara Seas. Similarity of IDA of Chukchi Sea to those of other seas decrease in the west direction. IDA species differences between regions within one sea could be greater than those between different seas.

  12. Radar for Mapping Sea Ice

    Science.gov (United States)

    Barath, F. T.; Jordan, R. L.

    1983-01-01

    X-band system has 100-m2 resolution. Wide swath imaging radar of synthetic aperature type transmits signal to ground station for subsequent processing into imagery. Concept meets functional requirements for continuously mapping sea ice in north and south polar regions.

  13. Performance and sickness at sea

    NARCIS (Netherlands)

    Bos, J.E.; Bles, W.

    2000-01-01

    Human performance at sea generally decreases with increasing severity of seasickness. Seasickness predictions can be made, be it that motions are assumed to be translational along a vertical axis only and sinusoidal. Here, a deterministic model is presented based on physiological knowledge of the ve

  14. Chicken Porridge with Sea Cucumber

    Institute of Scientific and Technical Information of China (English)

    1994-01-01

    Main ingredients: 50 grams of chicken breast, 200 grams of gray sea cucumbers Supplementary ingredients: 100 grams of water chestnut, the whites of four eggs, MSG, salt, wine, meat soup, starch, sugar, scallions, ginger, soy sauce Directions: Chop up the chicken breast and water chestnut into small

  15. IAHR List of Sea Parameters

    DEFF Research Database (Denmark)

    Frigaard, Peter; Helm-Petersen, J; Klopman, G.

    1997-01-01

    A Working Group on multidirectional waves formed by the International Association for Hydraulic Research has proposed an update of the IAHR List of Sea State Parameters from 1986 in the part concerning directional. Especially wave structure interaction with reflection of the waves have been treated....

  16. The Sea Ice Board Game

    Science.gov (United States)

    Bertram, Kathryn Berry

    2008-01-01

    The National Science Foundation-funded Arctic Climate Modeling Program (ACMP) provides "curriculum resource-based professional development" materials that combine current science information with practical classroom instruction embedded with "best practice" techniques for teaching science to diverse students. The Sea Ice Board…

  17. Climate change challenges for SEA

    DEFF Research Database (Denmark)

    Larsen, Sanne Vammen

    This paper takes a theoretical perspective on the challenges that climate changes pose for SEA. The theoretical framework used is the sociologist Ulrich Beck’s theory of risk society and the aspects that characterise this society. Climate change is viewed as a risk, and the theory is used to derive...

  18. The Sea Ice Board Game

    Science.gov (United States)

    Bertram, Kathryn Berry

    2008-01-01

    The National Science Foundation-funded Arctic Climate Modeling Program (ACMP) provides "curriculum resource-based professional development" materials that combine current science information with practical classroom instruction embedded with "best practice" techniques for teaching science to diverse students. The Sea Ice Board…

  19. Chaetognatha of the Andaman Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Nair, V.R.; Achuthankutty, C.T.; Nair, S.R.S.; Madhupratap, M.

    Chaetognatha of the Andaman Sea were studied during 51 and 52 cruises of R.V Gaveshani (Jan to Feb 1979) The area between southeast of Andaman island and north of Nicobar island had relatively higher density Total population of chaetognaths ranged...

  20. Generic Hurricane Extreme Seas State

    DEFF Research Database (Denmark)

    Wehmeyer, Christof; Skourup, Jesper; Frigaard, Peter

    2012-01-01

    the US east coast and the Gulf of Mexico (1851 - 2009) and Japanese east coast (1951 -2009) form the basis for Weibull extreme value analyses to determine return period respective maximum wind speeds. Unidirectional generic sea state spectra are obtained by application of the empirical models...

  1. Meiofauna of the Andaman Sea

    Digital Repository Service at National Institute of Oceanography (India)

    Ansari, Z.A.; Parulekar, A.H.

    Total meiofauna of the Andaman Sea, in the depth range 30-2150m was between 68 and 438/10cm2 (X-bar = 247.8). The biomass was within the range 3.57 and 32.8mg/10cm 2 (X-bar = 14.46). faunal components were maximum in sandy sediments which contained...

  2. Past and present Aral Sea

    Science.gov (United States)

    Dukhovniy, Viktor; Stulina, Galina; Eshchanov, Odylbek

    2013-04-01

    The tragedy of disappearing of Aral Sea is well known to the World. Before and after collapse of Soviet Union, a huge quantity of scientific and popular editions described with grief the situation around the Aral Sea. After the NIS states became independent, World Bank, UNDP, UNEP in proper competition with each other had provided some assessment of the situation through presentation of some small and medium grants, but after 2000, the local population remained alone with own problems. Although on the eyes of the present generation a unique transformation of great water body into deserts took place, the global scientific community did not find forces and financing for real and detail investigation of the processes accompanying the Sea shrinking and land formation. We should acknowledge and give big respect to NATO, later to German Government that through GTZ (now GIZ) - German International Collaboration Agency - and GFZ (Potzdam) paid attention to this area of environment crisis and organized scientific and protective design in the so-called Priaralie - the territory around the drying Sea and delta of the two rivers - Amudarya and Syrdarya. Thank to this assistance, the local specialists in collaboration with limited a number of foreign scientists (N.Aladin, P.Zavialov, Joop de Schutter, Hans Wilps, Hedi Oberhansli) organized significant works for detail socioeconomic, ecological and hydrological assessment situation in Priaralie and on the Aral sea coast. On this base, Ministry of Agriculture and Water resources of Uzbekistan and State Committee of Water resources of Kazakhstan developed a plan of rehabilitation of Amudarya and Syrdarya deltas and started implementation of these projects. If Kazakh water authority moved ahead in wetland restoration faster, a forestation of delta and drying bed of Aral Sea got big success in Uzbek territory. 244 thousands hectares of saxsaul and tamarix were planted for protection of the Priaralie. By request of GTZ SIC, ICWC

  3. Salton Sea Ecosystem Monitoring Project

    Science.gov (United States)

    Miles, A. Keith; Ricca, Mark A.; Meckstroth, Anne; Spring, Sarah E.

    2009-01-01

    The Salton Sea is critically important for wintering and breeding waterbirds, but faces an uncertain future due to water delivery reductions imposed by the Interstate and Federal Quantification Settlement Agreement of 2003. The current preferred alternative for wetland restoration at the Salton Sea is saline habitat impoundments created to mitigate the anticipated loss of wetland habitat. In 2006, a 50-hectare experimental complex that consisted of four inter-connected, shallow water saline habitat ponds (SHP) was constructed at the southeastern shoreline of the Salton Sea and flooded with blended waters from the Alamo River and Salton Sea. The present study evaluated ecological risks and benefits of the SHP concept prior to widespread restoration actions. This study was designed to evaluate (1) baseline chemical, nutrient, and contaminant measures from physical and biological constituents, (2) aquatic invertebrate community structure and colonization patterns, and (3) productivity of and contaminant risks to nesting waterbirds at the SHP. These factors were evaluated and compared with those of nearby waterbird habitat, that is, reference sites.

  4. Climate change challenges for SEA

    DEFF Research Database (Denmark)

    Larsen, Sanne Vammen

    This paper takes a theoretical perspective on the challenges that climate changes pose for SEA. The theoretical framework used is the sociologist Ulrich Beck’s theory of risk society and the aspects that characterise this society. Climate change is viewed as a risk, and the theory is used to derive...

  5. Myocardial Strain and Strain Rate Imaging: Comparison between Doppler Derived Strain Imaging and Speckle Tracking Echocardiography

    Directory of Open Access Journals (Sweden)

    Anita Sadeghpour

    2013-05-01

    Full Text Available Regional myocardial function has been traditionally assessed by visual estimation (1. Echocardiographic strain imaging which is known as deformation imaging, has been emerged as a quantitative technique to accurately estimate regional myocardial function and contractility. Currently, strain imaging has been regarded as a research tool in the most echocardiography laboratories. However, in recent years, strain imaging has gain momentum in daily clinical practice (2. The following two techniques have dominated the research arena of echocardiography: (1 Doppler based tissue velocity measurements, frequently referred to tissue Doppler or myocardial Doppler, and (2 speckle tracking on the basis of displacement measurements (3. Over the past two decades, Tissue Doppler Imaging (TDI and Doppler –derived strain (S and strain rate (SR imaging were introduced to quantify regional myocardial function. However, Doppler–derived strain variables faced criticisms, with regard to the angle dependency, noise interference, and substantial intraobserver and interobserver variability. The angle dependency is the major weakness of Doppler based methodology; however, it has the advantage of online measurements of velocities and time intervals with excellent temporal resolution, which is essential for the assessment of ischemia (4. Speckle-tracking echocardiography (STE or Non Doppler 2D strain echocardiography is a relatively new, largely angle-independent technique that analyzes motion by tracking natural acoustic reflections and interference patterns within an ultrasonic window. The image-processing algorithm tracks elements with approximately 20 to 40 pixels containing stable patterns and are described as ‘‘speckles’’ or ‘‘fingerprints’’. The speckles seen in grayscale B-mode (2D images are tracked consecutively frame to frame (5, 6. Assessment of 2D strain by STE is a semiautomatic method that requires definition of the myocardium

  6. Haloactinomyces albus gen. nov., sp. nov., isolated from Dead Sea.

    Science.gov (United States)

    Lai, Hangxian; Jiang, Yingying; Chen, Xiu; Li, Qinyuan; Jiang, Chenglin; Jiang, Yi; Wei, Xiaomin

    2017-01-10

    A novel halophilic, filamentous actinomycete strain, designated AFM 10258T, was isolated from a sediment sample collected from Dead Sea of Israel. The isolate grew with 10-35% NaCl and did not grow without NaCl. The isolate formed white aerial mycelium and long spore chains, and two spores were separated by sterile mycelium. The spores were non-motile, spherical and rugose-surfaced. The isolate contained meso-diaminopimelic acid as the diagnostic diamino acid and galactose and arabinose as the major whole-cell sugars. The polar lipids were diphosphatidylglycerol, phosphatidylmethylethanolamine, phosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylinositol and three unknown phospholipids. Major fatty acids were anteiso-C17:0, iso-C16:0 and iso-C15:0. MK-9(H4) was the predominant menaquinone and the DNA G+C content was 62.8 mol%. 16S rRNA gene sequence analysis indicated that strain AFM 10258T shared low sequence similarity with the closely related representatives of the families Pseudonocardiaceae (below 94.47%) and Actinopolysporaceae (below 93.76%). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain AFM 10258T formed a robust clade with members of the family Actinopolysporaceae. On the basis of analysis of phenotypic, chemical and molecular characteristics, strain AFM 10258T is considered to represent a novel species of a new genus , for which the name Haloactinomyces albus gen. nov., sp. nov., is proposed. The type strain is AFM 10258T (=DSM 45977T = CGMCC 4.7115T).

  7. Antimicrobial properties of sea anemone Anthopleura nigrescens from Pacific coast of Costa Rica

    Institute of Scientific and Technical Information of China (English)

    Henry Borbon; Sandra Valdes; Javier Alvarado-Mesen; Roy Soto; Ilena Vega

    2016-01-01

    Objective: To evaluate the antimicrobial and antifungal activities of the aqueous and partitioned extract of sea anemone Anthopleura nigrescens (A. nigrescens). Methods: The sea anemone A. nigrescens was collected, minced, homogenized, lyophilized and then further partitioned with diethyl ether, acetone, ethanol and water. These fractions were evaluated for antimicrobial activity against bacterial and fungal pathogens. Results: Acetone extract was found to produce a pronounced inhibition of 7.0 mm against Proteus vulgaris and diethyl ether extract inhibited Pseudomonas aeruginosa with an inhibition zone of 6.5 mm. In antifungal activity, ethanol extract showed good activity against Botrytis cinerea, Trichoderma harzianum and Rhizopus oryzae compared with other strains. Acetone and ethanol extract of A. nigrescens showed activity against all of pathogens tested. Slight activity was observed in the water extract with inhibition zone of 1.5 mm. Conclusions: The present study revealed that sea anemone A. nigrescens may also contain some biologically active agents which have potential activity against pathogenic microorganisms.

  8. Sunlight, Sea Ice, and the Ice Albedo Feedback in a Changing Arctic Sea Ice Cover

    Science.gov (United States)

    2015-09-30

    the Arctic Ocean and surrounding seas, with particular emphasis on the Chukchi and Beaufort Seas. Some of the largest changes to the sea ice cover are...Changing Arctic Sea Ice Cover Don Perovich ERDC – CRREL 72 Lyme Road Hanover, NH 03755 Phone: 603-646-4255 Email: donald.k.perovich...quantitative understanding of the partitioning of solar radiation by the Arctic sea ice cover and its impact on the heat and mass balance of the ice and upper

  9. Facing up to sea rise.

    Science.gov (United States)

    Pernetta, J

    1994-01-01

    A milder and less extreme climate, abundance of fish and mollusks, transport and communication, and fertile land at low altitudes have drawn humans to coastal areas and river valleys for centuries. More than 60% of the world's population occupy the 150 km closest to the coast. Millions of tourists come to coastlines and small tropical islands for recreation. About 80% of the global fish supply originates from the 19 km closest to the shore. Fish are the only protein source for the rapidly growing populations in many developing countries. Global climate change is increasing the sea level so much that by 2050, the mean increase will be about 38 cm (24-52 cm). The Intergovernmental Panel on Climate Change (IPCC) notes that the effects of sea level rise will differ from place to place. Direct effects are flooding of low-lying coastal areas and increased erosion rates. An indirect effect includes higher water tables and intrusion of saline water into aquifers, resulting in loss of fresh ground water resources. These effects may make coastal areas less suitable for settlement and agriculture. Coral sand settled on top of coral reefs makes up the unstable, small atoll islands of the Pacific and Indian Oceans. People on these islands depend almost entirely on the sea for their livelihood and on the small amount of fresh water with which they grow root crops and drink. Rising sea levels also threaten low lying countries, e.g., Bangladesh, and densely populated deltas, e.g., the Nile. Changes in the frequency and severity of flooding will increase Bangladesh's dependence on foreign aid. IPCC sees 3 possible responses to the rising sea level: defense, retreat, and accommodation. Accommodation is the only practical choice for many developing countries. A switch from rice cultivation to mariculture of prawns and fish is an example of accommodation. We need to more completely understand the natural processes in coastal environments to be better prepared for climate change.

  10. Temperature, Salinity, Oxygen, Phosphate, pH and Alkalinity data collected in the North Atlantic Ocean, Baltic Sea, Barents Sea, Greenland Sea, North Sea, Norwegian Sea and White Sea from R/Vs Artemovsk, Atlantida, Okeanograf, Professor Rudovits, and ice observations, 1957 - 1995 (NODC Accession 0073674)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Temperature, Salinity, Oxygen, Phosphate, pH and Alkalinity data collected in the North Atlantic Ocean, Baltic Sea, Barents Sea, Greenland Sea, North Sea, Norwegian...

  11. Photoacoustic spectroscopy of Entamoeba histolytica strains

    Science.gov (United States)

    Acosta-Avalos, D.; Alvarado-Gil, J. J.; Silva, E. F.; Orozco, E.; de Menezes, L. F.; Vargas, H.

    2005-06-01

    Pathogenic and non-pathogenic strains of E. histolytica are studied using photoacoustic spectroscopy. It is shown that the pathogenic strain presents a spectrum similar to that of iron sulfur proteins. The non-pathogenic strain does not show any relevant absorption at the studied wavelength range. The differences observed between the optical absorption spectra of both strains opens the possibility of using photoacoustic spectroscopy as a reliable and simple technique to identify different types of E. histolytica strains.

  12. Thermal biology of sea snakes and sea kraits.

    Science.gov (United States)

    Heatwole, Harold; Grech, Alana; Monahan, John F; King, Susan; Marsh, Helene

    2012-08-01

    Temperature probably had no direct effect on the evolution of sea kraits within their center of origin, a geologically stable thermal zone straddling the equator, but may have indirectly affected expansions and contractions in distributions beyond that zone through global fluctuations that caused alternation of higher and lower sea levels. The northern limit of the Laticauda colubrina complex seems to be the 20°C isotherm; in the south, the range does not reach that isotherm because there is no land (also a habitat requirement of sea kraits) within the zone of suitable temperature. The relationship of temperature to the pattern of geographic variation in morphology supports either the hypothesis of peripheral convergence or the developmental hypothesis but does not distinguish between them. Quadratic surfaces relating cumulative scores for coloration and morphological characters to global position showed a strong latitudinal component and an even stronger longitudinal one in which the direction of the latitudinal effect was reversed between east and west. A multivariate analysis revealed that while morphological characters vary significantly by location and climate when tested separately, when the influence of location on morphology is taken into account, no residual relationship between climate and morphology remains. Most marine snakes have mean upper temperature tolerances between 39°C and 40°C and operate at temperatures much nearer their upper thermal limits than their lower limits but still avoid deleterious extremes by diving from excessively hot water to deeper, cooler strata, and by surfacing when water is cold. At the surface in still water in sunlight, Pelamis can maintain its body temperature slightly above that of the water, but whether this is significant in nature is questionable. As temperature falls below 18-20°C, survival time is progressively reduced, accompanied by the successive occurrence of cessation of feeding, cessation of swimming, and

  13. Jet formation at the sea ice edge

    Science.gov (United States)

    Feltham, D. L.; Heorton, H. D.

    2014-12-01

    The sea ice edge presents a region of many feedback processes between the atmosphere, ocean and sea ice, which are inadequately represented in current climate models. Here we focus on on-ice atmospheric and oceanic flows at the sea ice edge. Mesoscale jet formation due to the Coriolis effect is well understood over sharp changes in surface roughness such as coastlines. This sharp change in surface roughness is experienced by the atmosphere flowing over, and ocean flowing under, a compacted sea ice edge. We have studied a dynamic sea ice edge responding to atmospheric and oceanic jet formation. The shape and strength of atmospheric and oceanic jets during on-ice flows is calculated from existing studies of the sea ice edge and prescribed to idealised models of the sea ice edge. An idealised analytical model of sea ice drift is developed and compared to a sea ice climate model (the CICE model) run on an idealised domain. The response of the CICE model to jet formation is tested at various resolutions. We find that the formation of atmospheric jets during on-ice winds at the sea ice edge increases the wind speed parallel to the sea ice edge and results in the formation of a sea ice edge jet. The modelled sea ice edge jet is in agreement with an observed jet although more observations are needed for validation. The increase in ice drift speed is dependent upon the angle between the ice edge and wind and can result in a 40% increase in ice transport along the sea ice edge. The possibility of oceanic jet formation during on-ice currents and the resultant effect upon the sea ice edge is less conclusive. Observations and climate model data of the polar oceans has been analysed to show areas of likely atmospheric jet formation, with the Fram Strait being of particular interest.

  14. Occurrence of diverse alkane hydroxylase alkB genes in indigenous oil-degrading bacteria of Baltic Sea surface water.

    Science.gov (United States)

    Viggor, Signe; Jõesaar, Merike; Vedler, Eve; Kiiker, Riinu; Pärnpuu, Liis; Heinaru, Ain

    2015-12-30

    Formation of specific oil degrading bacterial communities in diesel fuel, crude oil, heptane and hexadecane supplemented microcosms of the Baltic Sea surface water samples was revealed. The 475 sequences from constructed alkane hydroxylase alkB gene clone libraries were grouped into 30 OPFs. The two largest groups were most similar to Pedobacter sp. (245 from 475) and Limnobacter sp. (112 from 475) alkB gene sequences. From 56 alkane-degrading bacterial strains 41 belonged to the Pseudomonas spp. and 8 to the Rhodococcus spp. having redundant alkB genes. Together 68 alkB gene sequences were identified. These genes grouped into 20 OPFs, half of them being specific only to the isolated strains. Altogether 543 diverse alkB genes were characterized in the brackish Baltic Sea water; some of them representing novel lineages having very low sequence identities with corresponding genes of the reference strains.

  15. Profundibacterium mesophilum gen. nov., sp. nov., a novel member in the family Rhodobacteraceae isolated from deep-sea sediment in the Red Sea, Saudi Arabia

    KAUST Repository

    Lai, PokYui

    2012-06-08

    A slow-growing, strictly aerobic, Gram-negative, coccus bacterial strain, designated KAUST100406-0324T, was isolated from sea-floor sediment collected from the Red Sea, Saudi Arabia. The catalase- and oxidase-positive strain was non-sporulating and only slightly halophilic. Optimum growth occurred at 20-25 °C and at pH values ranging from 7.0 to 8.0. The major cellular fatty acids of the strain were unsaturated C18: 1ω6c and/or C18:1ω7c, C18:1ω7c 11-methyl and C16:1ω7c and/or C16:1ω6c. The major polar lipids were phosphatidylglycerol, phosphatidylethanolamine and two unidentified phospholipids. Ubiquinone 10 was the predominant lipoquinone. The DNA G+C content of strain KAUST100406-0324T was 64.0 mol%. Phylogenetic analysis of 16S rRNA gene sequences revealed that the novel strain belonged to the family Rhodobacteraceae of the class Alphaproteobacteria but formed a distinct evolutionary lineage from other bacterial species with validly published names. The 16S rRNA gene sequence of the novel strain was distantly related, but formed a monophyletic cluster with, those of bacteria from two moderately halophilic genera, Hwanghaeicola and Maribius. The similarity of the sequence between the novel strain KAUST100406-0324T and the type strains Hwanghaeicola aestuarii Y26T (accession number FJ230842), Maribius pelagius B5-6T (DQ514326) and Maribius salinus CL-SP27T (AY906863) were 94.5 %, 95.2 % and 95.3 %, respectively. Based on the physiological, phylogenetic and chemotaxonomic characteristics presented in this study, we propose that this strain represents a novel species of a new genus in the family Rhodobacteraceae, for which the name of Profundibacterium mesophilum gen. nov., sp. nov. was proposed, with KAUST100406-0324T (= JCM 17872T = NRRL B-59665T) as the type strain. © 2013 IUMS.

  16. Biogeography of Persephonella in deep-sea hydrothermal vents of the Western Pacific.

    Directory of Open Access Journals (Sweden)

    Sayaka eMino

    2013-04-01

    Full Text Available Deep-sea hydrothermal vent fields are areas on the seafloor with high biological productivity fueled by microbial chemosynthesis. Members of the Aquificales genus Persephonella are obligately chemosynthetic bacteria, and appear to be key players in carbon, sulfur, and nitrogen cycles in high temperature habitats at deep-sea vents. Although this group of bacteria has cosmopolitan distribution in deep-sea hydrothermal ecosystem around the world, little is known about their population structure such as intraspecific genomic diversity, distribution pattern, and phenotypic diversity. We developed the multi-locus sequence analysis (MLSA scheme for their genomic characterization. Sequence variation was determined in five housekeeping genes and one functional gene of 36 P. hydrogeniphila strains originated from the Okinawa Trough and the South Mariana Trough. Although the strains share > 98.7% similarities in 16S rRNA gene sequences, MLSA revealed 35 different sequence types, indicating their extensive genomic diversity. A phylogenetic tree inferred from all concatenated gene sequences revealed the clustering of isolates according to the geographic origin. In addition, the phenotypic clustering pattern inferred from whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF/MS analysis can be correlated to their MLSA clustering pattern. This study represents the first MLSA combined with phenotypic analysis indicative of allopatric speciation of deep-sea hydrothermal vent bacteria.

  17. Meta-omic analyses of Baltic Sea cyanobacteria: diversity, community structure and salt acclimation.

    Science.gov (United States)

    Celepli, Narin; Sundh, John; Ekman, Martin; Dupont, Chris L; Yooseph, Shibu; Bergman, Birgitta; Ininbergs, Karolina

    2017-02-01

    Cyanobacteria are important phytoplankton in the Baltic Sea, an estuarine-like environment with pronounced north to south gradients in salinity and nutrient concentrations. Here, we present a metagenomic and -transcriptomic survey, with subsequent analyses targeting the genetic identity, phylogenetic diversity, and spatial distribution of Baltic Sea cyanobacteria. The cyanobacterial community constituted close to 12% of the microbial population sampled during a pre-bloom period (June-July 2009). The community was dominated by unicellular picocyanobacteria, specifically a few highly abundant taxa (Synechococcus and Cyanobium) with a long tail of low abundance representatives, and local peaks of bloom-forming heterocystous taxa. Cyanobacteria in the Baltic Sea differed genetically from those in adjacent limnic and marine waters as well as from cultivated and sequenced picocyanobacterial strains. Diversity peaked at brackish salinities 3.5-16 psu, with low N:P ratios. A shift in community composition from brackish to marine strains was accompanied by a change in the repertoire and expression of genes involved in salt acclimation. Overall, the pre-bloom cyanobacterial population was more genetically diverse, widespread and abundant than previously documented, with unicellular picocyanobacteria being the most abundant clade along the entire Baltic Sea salinity gradient. © 2017 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

  18. [Selected properties of Bacteroides fragilis enterotoxigenic strains].

    Science.gov (United States)

    Rokosz, A; Meisel-Mikołajczyk, F

    1995-01-01

    Seven B. fragilis strains were examined. One strain was reference, non-enterotoxigenic, representing serotype E2 according to Beerens et al. (1971). Six strains produced enterotoxin (ETBF). Four of them were isolated from human feces and two of them from swine feces. All strains were investigated morphologically, biochemically (ATB Expression, France) and by means of direct immunofluorescence (Bacteroides--IF test, Poland). Their resistance to chemotherapeutics was tested (ATB Expression, France). The MIC values of clindamycin and metronidazole were determined using E test strips (AB Biodisk, Sweden). Each strain formed capsules. The percentage of encapsulated cells was high (80-100%). Some strains produced thick capsules. Biochemical patterns were similar and typical for B. fragilis rods. One enterotoxigenic strain produced gelatinase and three ETBF strains fermented trehalose. All strains reacted in direct immunofluorescence exclusively with conjugate against serotype E of BFG. Thus, each strain showed antigenic pattern E. Drug susceptibility of all strains was similar. One enterotoxigenic strain was resistant to clindamycin. All strains were susceptible to metronidazole. These studies indicate that on the basis of morphological, biochemical and serological features (IF), enterotoxigenic B. fragilis strains cannot be distinguished from the nonenterotoxigenic one. Also, the correlation between toxigenicity and drug sensitivity of the examined strains is not observed.

  19. Global Warming and Caspian Sea Level Fluctuations

    CERN Document Server

    Ardakanian, Reza

    2013-01-01

    Coastal regions have a high social, economical and environmental importance. Due to this importance the sea level fluctuations can have many bad consequences. In this research the correlation between the increasing trend of temperature in coastal stations due to Global Warming and the Caspian Sea level has been established. The Caspian Sea level data has been received from the Jason-1 satellite. It was resulted that the monthly correlation between the temperature and sea level is high and also positive and almost the same for all the stations. But the yearly correlation was negative. It means that the sea level has decreased by the increase in temperature.

  20. Deep-sea fungi: Occurrence and adaptations

    Digital Repository Service at National Institute of Oceanography (India)

    Damare, S.

    in it being the least understood environments on the earth. The understanding of deep sea will unravel a lot of exciting information about the history of life existing on earth. The deep sea was thought to be a very difficult environment for life forms.... Danovaro R, Fabiano M, Della Croce N (1995) Labile organic matter and microbial biomasses in deep-sea sediments (Eastern Mediterranean Sea). Deep-Sea Research I, 40: 953-65. DasSarma S, Arora P (2001) Halophiles. Encyclopedia of Life Sciences. Macmillan...

  1. Ecological consequences of sea-ice decline.

    Science.gov (United States)

    Post, Eric; Bhatt, Uma S; Bitz, Cecilia M; Brodie, Jedediah F; Fulton, Tara L; Hebblewhite, Mark; Kerby, Jeffrey; Kutz, Susan J; Stirling, Ian; Walker, Donald A

    2013-08-02

    After a decade with nine of the lowest arctic sea-ice minima on record, including the historically low minimum in 2012, we synthesize recent developments in the study of ecological responses to sea-ice decline. Sea-ice loss emerges as an important driver of marine and terrestrial ecological dynamics, influencing productivity, species interactions, population mixing, gene flow, and pathogen and disease transmission. Major challenges in the near future include assigning clearer attribution to sea ice as a primary driver of such dynamics, especially in terrestrial systems, and addressing pressures arising from human use of arctic coastal and near-shore areas as sea ice diminishes.

  2. Extreme Temperature Strain Measurement System

    Science.gov (United States)

    1990-08-01

    Road, Lantham, New York 12110, Phone (518) 785-2323, noncontacting, " Fotonic " fiber bundle sensor * Dual Core Fiber Optic Strain Gage with Laser input...Lantham, New York 12110, Phone (518) 456-4131, Reflective Light, Fiber bundles, " Fotonic Sensors", to 600°F "• Moire’ Technique, optical interference

  3. Asymptomatic bacteriuria Escherichia coli strains

    DEFF Research Database (Denmark)

    Hancock, Viktoria; Nielsen, E.M.; Klemm, Per

    2006-01-01

    Urinary tract infections (UTIs) affect millions of people each year. Escherichia coli is the most common organism associated with asymptomatic bacteriuria (ABU) in humans. Persons affected by ABU may carry a particular E. coli strain for extended periods of time without any symptoms. In contrast...

  4. Bacteriocins and novel bacterial strains.

    Science.gov (United States)

    Poultry is thought to be a significant source of Campylobacter in human disease. We evaluated anti-Campylobacter activity among 365 Bacillus and Paenibacillus isolates from poultry. One novel antagonistic Bacillus circulans and three Paenibacillus polymyxa strains were identified and further studi...

  5. Job strain and alcohol intake

    DEFF Research Database (Denmark)

    Heikkilä, Katriina; Nyberg, Solja T; Fransson, Eleonor I

    2012-01-01

    The relationship between work-related stress and alcohol intake is uncertain. In order to add to the thus far inconsistent evidence from relatively small studies, we conducted individual-participant meta-analyses of the association between work-related stress (operationalised as self-reported job...... strain) and alcohol intake....

  6. Asymptomatic bacteriuria Escherichia coli strains

    DEFF Research Database (Denmark)

    Hancock, Viktoria; Nielsen, E.M.; Klemm, Per

    2006-01-01

    Urinary tract infections (UTIs) affect millions of people each year. Escherichia coli is the most common organism associated with asymptomatic bacteriuria (ABU) in humans. Persons affected by ABU may carry a particular E. coli strain for extended periods of time without any symptoms. In contrast...

  7. Computational strain gradient crystal plasticity

    DEFF Research Database (Denmark)

    Niordson, Christian Frithiof; Kysar, Jeffrey W.

    2014-01-01

    of plane crystal plasticity are studied: pure shear of a single crystal between rigid platens as well as plastic deformation around cylindrical voids in hexagonal close packed and face centered cubic crystals. Effective in-plane constitutive slip parameters for plane strain deformation of specifically...

  8. Job strain and tobacco smoking

    DEFF Research Database (Denmark)

    Heikkilä, Katriina; Nyberg, Solja T; Fransson, Eleonor I

    2012-01-01

    Tobacco smoking is a major contributor to the public health burden and healthcare costs worldwide, but the determinants of smoking behaviours are poorly understood. We conducted a large individual-participant meta-analysis to examine the extent to which work-related stress, operationalised as job...... strain, is associated with tobacco smoking in working adults....

  9. Screening for biohydrogen production by cyanobacteria isolated from the Baltic Sea and Finnish lakes

    Energy Technology Data Exchange (ETDEWEB)

    Allahverdiyeva, Yagut; Leino, Hannu; Shunmugam, Sumathy; Aro, Eva-Mari [Department of Biochemistry and Food Chemistry, Plant Physiology and Molecular Biology, University of Turku, Tykistokatu 6 A, FIN-20014 Turku (Finland); Saari, Lyudmila; Fewer, David P.; Sivonen, Kaarina [Department of Applied Chemistry and Microbiology, University of Helsinki, P.O. Box 56, FI-00014 (Finland)

    2010-02-15

    Cyanobacteria are the only bacteria capable of performing oxygenic photosynthesis in which they harness solar energy and convert it into chemical energy stored in carbohydrates. Under specific conditions, cyanobacteria can use solar energy to produce also molecular hydrogen. Biodiversity among cyanobacteria for H{sub 2} production has not been efficiently studied. Here we report the screening of 400 cyanobacterial strains isolated from the Baltic Sea and Finnish lakes for efficient H{sub 2} producers. Approximately 50% of these strains produced detectable amounts of H{sub 2}. Ten strains produced similar or up to 4 times as much of H{sub 2} as the hydrogenase mutants of Anabaena PCC 7120 and Nostoc punctiforme ATCC 29133 specifically engineered in different laboratories to produce higher amounts of H{sub 2}. All ten H{sub 2} producers are N{sub 2}-fixing filamentous, heterocystous strains, seven of them are benthic and three are planktonic strains. Different culturing parameters, such as light intensity, cell density, pH and temperature had a pronounced effect on the H{sub 2} production rates of the two good H{sub 2} producers, Calothrix 336/3 and XPORK 5E strains. Notably, the culture conditions for optimal H{sub 2} production varied between different cyanobacterial strains. (author)

  10. Heterotrophic bacteria from brackish water of the southern Baltic Sea: biochemical and molecular identification and characterisation

    Directory of Open Access Journals (Sweden)

    Agnieszka Cabaj

    2006-12-01

    Full Text Available Six bacterial strains isolated from the surface water of thesouthern Baltic Sea were described on the basis of their morphological,physiological and biochemical features, and were classified onthe basis of 16S rDNA sequence analysis. Comparative analysesof the 16S rDNA sequences of five of the six bacterial strainsexamined displayed a ≥98% similarity to the sequences availablein the NCBI GenBank. The 16S rDNA sequence of strain 2 sharedonly a 96% similarity with other published sequences, whichsuggests that this is a new, hitherto unknown species. The isolatedheterotrophic bacteria belong to the families Bacillaceae(strain 1, Flexibacteriaceae (strain 2, Sphingomonadaceae(strains 3, 5, Micrococcaceae (strain 4 and Aurantimonadaceae(strain 6.    This is the first study in which the polyphasic approach hasbeen applied to the identification of heterotrophic bacteriafrom the brackish waters of the Gulf of Gdańsk and Gdańsk Deep.

  11. On the Sea, From the Sea, Of the Sea: The Physics of maritime Governance

    Science.gov (United States)

    James, Royce; Page, Eric

    2014-03-01

    The United States Coast Guard Academy Physics Section is proud to present our initial conceptions of ``On the Sea, From the Sea, Of the Sea: The Physics of Maritime Governance,'' a program funded by an APS Outreach Grant in 2013. In our classes, the Physics Section has focused on active student engagement for the past ten years. Recently, we have refined our program to make heavy use of Interactive Lecture Demonstrations (ILDs) and our own highly interactive adaptation which we call Interactive Lecture Labs (ILLs). ``On the Sea'' is a unique opportunity to investigate their use in a different learning modality from our standard college level military academic use. Multigenerational science, technology, engineering, and mathematics (STEM) projects are a prolific source of academic discourse, while learning through play has been touted as an effective learning tool. We plan to investigate group and individual participation, intragroup communication, demographics, and prior skill (or education) in comparison to outcomes in learning objectives through projects designed to educate the Coast Guard Academy and surrounding community on the physics of the Coast Guard's missions. Progress on the lab and demonstration designs, community participation, and our emerging ILL and ILD pedagogical methods, will be reported.

  12. Deglacial sea level history of the East Siberian Sea and Chukchi Sea margins

    Science.gov (United States)

    Cronin, Thomas M.; O'Regan, Matt; Pearce, Christof; Gemery, Laura; Toomey, Michael; Semiletov, Igor; Jakobsson, Martin

    2017-09-01

    Deglacial (12.8-10.7 ka) sea level history on the East Siberian continental shelf and upper continental slope was reconstructed using new geophysical records and sediment cores taken during Leg 2 of the 2014 SWERUS-C3 expedition. The focus of this study is two cores from Herald Canyon, piston core SWERUS-L2-4-PC1 (4-PC1) and multicore SWERUS-L2-4-MC1 (4-MC1), and a gravity core from an East Siberian Sea transect, SWERUS-L2-20-GC1 (20-GC1). Cores 4-PC1 and 20-GC were taken at 120 and 115 m of modern water depth, respectively, only a few meters above the global last glacial maximum (LGM; ˜ 24 kiloannum or ka) minimum sea level of ˜ 125-130 meters below sea level (m b.s.l.). Using calibrated radiocarbon ages mainly on molluscs for chronology and the ecology of benthic foraminifera and ostracode species to estimate paleodepths, the data reveal a dominance of river-proximal species during the early part of the Younger Dryas event (YD, Greenland Stadial GS-1) followed by a rise in river-intermediate species in the late Younger Dryas or the early Holocene (Preboreal) period. A rapid relative sea level rise beginning at roughly 11.4 to 10.8 ka ( ˜ 400 cm of core depth) is indicated by a sharp faunal change and unconformity or condensed zone of sedimentation. Regional sea level at this time was about 108 m b.s.l. at the 4-PC1 site and 102 m b.s.l. at 20-GC1. Regional sea level near the end of the YD was up to 42-47 m lower than predicted by geophysical models corrected for glacio-isostatic adjustment. This discrepancy could be explained by delayed isostatic adjustment caused by a greater volume and/or geographical extent of glacial-age land ice and/or ice shelves in the western Arctic Ocean and adjacent Siberian land areas.

  13. Sea ice thickness and recent Arctic warming

    Science.gov (United States)

    Lang, Andreas; Yang, Shuting; Kaas, Eigil

    2017-01-01

    The climatic impact of increased Arctic sea ice loss has received growing attention in the last years. However, little focus has been set on the role of sea ice thickness, although it strongly determines surface heat fluxes. Here ensembles of simulations using the EC-Earth atmospheric model (Integrated Forecast System) are performed and analyzed to quantify the atmospheric impacts of Arctic sea ice thickness change since 1982 as revealed by the sea ice model assimilation Global Ice-Ocean Modeling and Assimilation System. Results show that the recent sea ice thinning has significantly affected the Arctic climate, while remote atmospheric responses are less pronounced owing to a high internal atmospheric variability. Locally, the sea ice thinning results in enhancement of near-surface warming of about 1°C per decade in winter, which is most pronounced over marginal sea ice areas with thin ice. This leads to an increase of the Arctic amplification factor by 37%.

  14. Episodic sea-floor spreading in the Southern Red Sea

    Science.gov (United States)

    Almalki, Khalid A.; Betts, Peter G.; Ailleres, Laurent

    2014-03-01

    The Red Sea represents the most spectacular example of a juvenile ocean basin on the modern Earth. Synthesis of regional aeromagnetic data, gravity data, seismic refraction data coupled with structural mapping from the Farasan Islands suggest that the opening of the Red Sea is complex and episodic. Modeling of magnetic and gravity data constrained by seismic refraction data reveals the Arabian Shelf is underlain by oceanic and transitional crust and that mafic diking and intrusions are focused at the continental-transitional crust boundary. This relationship is interpreted to indicate that early Miocene diking along the Arabian Escarpment heralded termination of oceanic basin formation and a shift in the locus of extension focused from a central mid-ocean ridge spreading center to the continental-transitional crust zone. Uplift along the Arabian Escarpment caused erosion and Middle to Late Miocene sedimentation of the Farasan Bank onto existing oceanic crust, suggesting that the extensive sedimentary banks of the southern Red Sea are not passive margins. Re-initiation of spreading occurred at ca 5 Ma. Pliocene to Pleistocene Shelf reef systems (Farasan Islands), developed on the flanks of the spreading ridge, are extensively overprinted by normal faults, suggesting that not all crustal extension is accommodated by active spreading.

  15. Diversity of the nitrogen starvation responses in subarctic Desmodesmus sp. (Chlorophyceae) strains isolated from symbioses with invertebrates.

    Science.gov (United States)

    Baulina, Olga; Gorelova, Olga; Solovchenko, Alexei; Chivkunova, Olga; Semenova, Larisa; Selyakh, Irina; Scherbakov, Pavel; Burakova, Olga; Lobakova, Elena

    2016-04-01

    We report on common and strain-specific responses to nitrogen (N) starvation recorded in four closely related symbiotic Desmodesmus strains from taxonomically very distant animals (hydroids, a sponge and a polychaete) dwelling in the White Sea. A number of common for the studied strains and free-living microalgae as well as some specific patterns of acclimation to the N starvation were documented. The common responses included a slowdown of cell division, a reduction of photosynthetic apparatus and a vast expansion of storage subcompartments of the cell. Although these responses were qualitatively similar to those known in free-living chlorophytes, in the studied strains they occurred in a strain-specific manner. The specific N-starvation responses comprised formation of chloroplast envelope membrane twirls, thinning of the appressed thylakoid membranes and a loss of the luminal depositions and channeling of the fixed carbon to cell wall polysaccharide layer. Desmodesmus sp. from a hydroid featured a unique, among the studied strains, capability of 'emergency' degradation of Rubisco, apparently to salvage the N contained in this protein. The obtained results are discussed in view of the remarkable physiological plasticity of the symbiotic Desmodesmus spp. and their survival under the harsh conditions of the subarctic sea habitat.

  16. Thermophilic hydrogen-producing bacteria inhabiting deep-sea hydrothermal environments represented by Caloranaerobacter.

    Science.gov (United States)

    Jiang, Lijing; Xu, Hongxiu; Zeng, Xiang; Wu, Xiaobing; Long, Minnan; Shao, Zongze

    2015-11-01

    Hydrogen is an important energy source for deep-sea hydrothermal vent ecosystems. However, little is known about microbes and their role in hydrogen turnover in the environment. In this study, the diversity and physiological characteristics of fermentative hydrogen-producing microbes from deep-sea hydrothermal vent fields were described for the first time. Seven enrichments were obtained from hydrothermal vent sulfides collected from the Southwest Indian Ocean, East Pacific and South Atlantic. 16S rRNA gene analysis revealed that members of the Caloranaerobacter genus were the dominant component in these enrichments. Subsequently, three thermophilic hydrogen producers, strains H363, H53214 and DY22619, were isolated. They were phylogenetically related to species of the genus Caloranaerobacter. The H2 yields of strains H363, H53214, DY22619 and MV107, which was the type species of genus Caloranaerobacter, were 0.11, 1.21, 3.13 and 2.85 mol H2/mol glucose, respectively. Determination of the main soluble metabolites revealed that strains H363, H53214 and MV107 performed heterolactic fermentations, while strain DY22619 performed butyric acid fermentation, indicating distinct fermentation patterns among members of the genus. Finally, a diversity of forms of [FeFe]-hydrogenase with different modular structures was revealed based on draft genomic data of Caloranaerobacter strains. This highlights the complexity of hydrogen metabolism in Caloranaerobacter, reflecting adaptations to environmental conditions in hydrothermal vent systems. Collectively, results suggested that Caloranaerobacter species might be ubiquitous and play a role in biological hydrogen generation in deep-sea hydrothermal vent fields.

  17. High Strain, Strain Rate Behavior of PTFE/Al/W

    Science.gov (United States)

    Addiss, John; Cai, Jing; Walley, Steve; Proud, William; Nesterenko, Vitali

    2007-06-01

    Conventional dropweight technique was modified to accommodate low amplitude signals from low strength, cold isostatically pressed energetic ``heavy'' composites of polytetrafluoroethylene (PTFE)/AL/W. The fracture strength, strain and post-critical behaviour of fractured samples were measured for samples of different porosity and W grain size (the masses of each component being the same in each case). Unusual phenomenon of significantly higher strength (55 MPa) of porous composites (density 5.9 g/cc) with small tungsten particles (1 micron) in comparison with strength (32 MPa) of dense composites (7.1 g/cc) with larger tungsten particles (20 micron) was observed. This is attributed to force chains created by a network of small tungsten particles. Interrupted tests at the different level of strains revealed mechanism of fracture under dynamic compression.

  18. A NEW STRAIN OF TRANSMISSIBLE LEUCEMIA IN FOWLS (STRAIN H).

    Science.gov (United States)

    Ellermann, V

    1921-03-31

    1. A new strain of fowl leucosis has been transmitted through twelve generations of fowls. 2. An increase in virulence was observed during its passage. This was shown in a shortening of the interval between inoculation and death. The increase in virulence does not affect the number of successful inoculations, which remains approximately constant in from 20 to 40 per cent of the birds employed. 3. As with former strains, the disease manifests itself in various forms; i.e., myeloid and intravascular lymphoid types. A single lymphatic case was observed. 4. In several intravascular cases a diminution in the hemolytic power of the serum was established. This phenomenon was absent in a number of myeloid cases. 5. Active immunization cannot be produced by means of the subcutaneous injection of virulent material. 6. The finding of previous experiments that the virus is filterable has been confirmed. 7. The inoculation of human leucemic material into fowls gave negative results.

  19. Biological characteristics of marine bacterium S - 9801 strain and its culture conditions of pigment production

    Institute of Scientific and Technical Information of China (English)

    田黎; 何培青; 武洪庆; 温占波; 刘晨临; 李光友

    2002-01-01

    Strain of Flavobacterium sp. (S- 9801), was screened from 207 strains of marine bacteria isolated from the Bohai Sea continental shelf and the Zhujiang Estuary, for its red pigment production. The biological characteristics of strain S- 9801 and culture conditions of pigment production have been checked out in this study. The color of the bacterial colony on 2216E medium was from coccineus to rose bengal. Optimum culture conditions were sodium chloride concentration(g/dm3), 10~30; pH,3~8; temperature, 25~28℃; tryptone and yeast extract as nitrogen sources and gluccse as carbon source. Under optimum conditions, pigment accumulation started after 12 h, reaching a maximum rate of synthesis at 36 h.

  20. Variability and Trends in Sea Ice Extent and Ice Production in the Ross Sea

    Science.gov (United States)

    Comiso, Josefino; Kwok, Ronald; Martin, Seelye; Gordon, Arnold L.

    2011-01-01

    Salt release during sea ice formation in the Ross Sea coastal regions is regarded as a primary forcing for the regional generation of Antarctic Bottom Water. Passive microwave data from November 1978 through 2008 are used to examine the detailed seasonal and interannual characteristics of the sea ice cover of the Ross Sea and the adjacent Bellingshausen and Amundsen seas. For this period the sea ice extent in the Ross Sea shows the greatest increase of all the Antarctic seas. Variability in the ice cover in these regions is linked to changes in the Southern Annular Mode and secondarily to the Antarctic Circumpolar Wave. Over the Ross Sea shelf, analysis of sea ice drift data from 1992 to 2008 yields a positive rate of increase in the net ice export of about 30,000 sq km/yr. For a characteristic ice thickness of 0.6 m, this yields a volume transport of about 20 cu km/yr, which is almost identical, within error bars, to our estimate of the trend in ice production. The increase in brine rejection in the Ross Shelf Polynya associated with the estimated increase with the ice production, however, is not consistent with the reported Ross Sea salinity decrease. The locally generated sea ice enhancement of Ross Sea salinity may be offset by an increase of relatively low salinity of the water advected into the region from the Amundsen Sea, a consequence of increased precipitation and regional glacial ice melt.

  1. Relationship between Hadley circulation and sea ice extent in the Bering Sea

    Institute of Scientific and Technical Information of China (English)

    ZHOU BoTao; WANG HuiJun

    2008-01-01

    The linkage between Hadley circulation (HC) and sea ice extent in the Bering Sea during March-April is investigated through an analysis of observed data in this research. It is found that HC is negatively correlated to the sea ice extent in the Bering Sea, namely, strong (weak) HC is corresponding to less (more) sea ice in the Bering Sea. The present study also addresses the large-scale atmospheric general circulation changes underlying the relationship between HC and sea ice in the Bering Sea. It follows that a positive phase of HC corresponds to westward located Aleutian low, anomalous southerlies over the eastern North Pacific and higher temperature in the Bering Sea, providing unfavorable atmospheric and thermal conditions for the sea ice forming, and thus sea ice extent in the Bering Sea is decreased, and vice versa. In addition, it is further identified that East Asian-North Pacific-North America telecon-nection may play an important role in linking HC and changes of atmospheric circulations as well as sea ice in the Bering Sea.

  2. Strains

    Science.gov (United States)

    ... N, Rodeo SA, Alini M, Maher S, et al. Physiology and pathophysiology of musculoskeletal tissues. In: Miller MD, Thompson SR, eds. DeLee and Drez's Orthopaedic Sports Medicine . 4th ed. Philadelphia, PA: Elsevier Saunders; 2015: ...

  3. Characterisation of MRSA from Malta and the description of a Maltese epidemic MRSA strain.

    Science.gov (United States)

    Scicluna, E A; Shore, A C; Thürmer, A; Ehricht, R; Slickers, P; Borg, M A; Coleman, D C; Monecke, S

    2010-02-01

    Malta has one of the highest prevalence rates of methicillin-resistant Staphylococcus aureus (MRSA) in Europe. However, only limited typing data are currently available. In order to address this situation, 45 MRSA isolates from the Mater Dei Hospital in Msida, Malta, were characterised using DNA microarrays. The most common strain was ST22-MRSA-IV (UK-EMRSA-15, 30 isolates). Sporadic strains included ST36-MRSA-II (UK-EMRSA-16, two isolates), PVL-positive ST80-MRSA-IV (European Clone, one isolate), ST228-MRSA-I (Italian Clone/South German Epidemic Strain, one isolate) and ST239-MRSA-III (Vienna/Hungarian/Brazilian Epidemic Strain, one isolate). Ten MRSA isolates belonged to a clonal complex (CC) 5/ST149, spa type t002 strain. This strain harboured an SCCmec IV element (mecA, delta mecR, ugpQ, dcs, ccrA2 and ccrB2), as well as novel alleles of ccrA/B and the fusidic acid resistance element Q6GD50 (previously described in the sequenced strain MSSA476, BX571857.1:SAS0043). It also carried the gene for enterotoxin A (sea) and the egc enterotoxin locus, as well as (in nine out of ten isolates) genes encoding the toxic shock syndrome toxin (tst1) and enterotoxins C and L (sec, sel). While the presence of the other MRSA strains suggests foreign importation due to travel between Malta and other European countries, the CC5/t002 strain appears, so far, to be restricted to Malta.

  4. Characterisation of MRSA from Malta and the description of a Maltese epidemic MRSA strain.

    LENUS (Irish Health Repository)

    Scicluna, E A

    2010-02-01

    Malta has one of the highest prevalence rates of methicillin-resistant Staphylococcus aureus (MRSA) in Europe. However, only limited typing data are currently available. In order to address this situation, 45 MRSA isolates from the Mater Dei Hospital in Msida, Malta, were characterised using DNA microarrays. The most common strain was ST22-MRSA-IV (UK-EMRSA-15, 30 isolates). Sporadic strains included ST36-MRSA-II (UK-EMRSA-16, two isolates), PVL-positive ST80-MRSA-IV (European Clone, one isolate), ST228-MRSA-I (Italian Clone\\/South German Epidemic Strain, one isolate) and ST239-MRSA-III (Vienna\\/Hungarian\\/Brazilian Epidemic Strain, one isolate). Ten MRSA isolates belonged to a clonal complex (CC) 5\\/ST149, spa type t002 strain. This strain harboured an SCCmec IV element (mecA, delta mecR, ugpQ, dcs, ccrA2 and ccrB2), as well as novel alleles of ccrA\\/B and the fusidic acid resistance element Q6GD50 (previously described in the sequenced strain MSSA476, BX571857.1:SAS0043). It also carried the gene for enterotoxin A (sea) and the egc enterotoxin locus, as well as (in nine out of ten isolates) genes encoding the toxic shock syndrome toxin (tst1) and enterotoxins C and L (sec, sel). While the presence of the other MRSA strains suggests foreign importation due to travel between Malta and other European countries, the CC5\\/t002 strain appears, so far, to be restricted to Malta.

  5. Modelling to very high strains

    Science.gov (United States)

    Bons, P. D.; Jessell, M. W.; Griera, A.; Evans, L. A.; Wilson, C. J. L.

    2009-04-01

    Ductile strains in shear zones often reach extreme values, resulting in typical structures, such as winged porphyroclasts and several types of shear bands. The numerical simulation of the development of such structures has so far been inhibited by the low maximum strains that numerical models can normally achieve. Typical numerical models collapse at shear strains in the order of one to three. We have implemented a number of new functionalities in the numerical platform "Elle" (Jessell et al. 2001), which significantly increases the amount of strain that can be achieved and simultaneously reduces boundary effects that become increasingly disturbing at higher strain. Constant remeshing, while maintaining the polygonal phase regions, is the first step to avoid collapse of the finite-element grid required by finite-element solvers, such as Basil (Houseman et al. 2008). The second step is to apply a grain-growth routine to the boundaries of polygons that represent phase regions. This way, the development of sharp angles is avoided. A second advantage is that phase regions may merge or become separated (boudinage). Such topological changes are normally not possible in finite element deformation codes. The third step is the use of wrapping vertical model boundaries, with which optimal and unchanging model boundaries are maintained for the application of stress or velocity boundary conditions. The fourth step is to shift the model by a random amount in the vertical direction every time step. This way, the fixed horizontal boundary conditions are applied to different material points within the model every time step. Disturbing boundary effects are thus averaged out over the whole model and not localised to e.g. top and bottom of the model. Reduction of boundary effects has the additional advantage that model can be smaller and, therefore, numerically more efficient. Owing to the combination of these existing and new functionalities it is now possible to simulate the

  6. Micromechanics of Sea Urchin spines.

    Directory of Open Access Journals (Sweden)

    Naomi Tsafnat

    Full Text Available The endoskeletal structure of the Sea Urchin, Centrostephanus rodgersii, has numerous long spines whose known functions include locomotion, sensing, and protection against predators. These spines have a remarkable internal microstructure and are made of single-crystal calcite. A finite-element model of the spine's unique porous structure, based on micro-computed tomography (microCT and incorporating anisotropic material properties, was developed to study its response to mechanical loading. Simulations show that high stress concentrations occur at certain points in the spine's architecture; brittle cracking would likely initiate in these regions. These analyses demonstrate that the organization of single-crystal calcite in the unique, intricate morphology of the sea urchin spine results in a strong, stiff and lightweight structure that enhances its strength despite the brittleness of its constituent material.

  7. Sea Power. Quickscan; Zeekracht. Quickscan

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2008-08-15

    The Dutch Stichting Natuur en Milieu (The Netherlands Foundation for Nature and Environment - SNM) takes the view that the long time span between application for a permit and the realization of offshore wind parks in the North Sea is the result of unnecessary bureaucracy. Therefore SNM has asked the Kafka Brigade to list the procedures for construction of offshore wind parks in the North Sea that might be causing these delays. [mk]. [Dutch] de Stichting Natuur en Milieu (SNM) is van mening dat de oorzaak van de lange doorlooptijd die ligt tussen het aanvragen van een vergunning en de realisatie van offshore windparken in de Noordzee ligt in de onnodige bureaucratie. SNM heeft daarom de Kafkabrigade gevraagd een inventarisatie te maken van procedures rond het bouwen van offshore windmolenparken in de Noordzee die mogelijk vertragend kunnen werken.

  8. Generic Hurricane Extreme Seas State

    DEFF Research Database (Denmark)

    Wehmeyer, Christof; Skourup, Jesper; Frigaard, Peter

    2012-01-01

    Extreme sea states, which the IEC 61400-3 (2008) standard requires for the ultimate limit state (ULS) analysis of offshore wind turbines are derived to establish the design basis for the conceptual layout of deep water floating offshore wind turbine foundations in hurricane affected areas...... data is required for a type specific conceptual design. ULS conditions for different return periods are developed, which can subsequently be applied in siteindependent analysis and conceptual design. Recordings provided by National Oceanic and Atmospheric Administration (NOAA), of hurricanes along...... for hurricane generates seas by Young (1998, 2003, and 2006), requiring maximum wind speeds, forward velocity and radius to maximum wind speed. An averaged radius to maximum sustained wind speeds, according to Hsu et al. (1998) and averaged forward speed of cyclonic storms are applied in the initial state...

  9. Mind the gap in SEA

    DEFF Research Database (Denmark)

    Larsen, Sanne Vammen; Kørnøv, Lone; Wejs, Anja

    2012-01-01

    and discussed, mainly based on Scott's theory of institutions. The institutional analysis highlights a regulatory element, since the assessment of climate change synergies is underpinned by legislation, but not by guidance. This means that great focus is on normative elements such as the local interpretation...... of legislation and of climate change mitigation and adaptation. The analysis also focuses on how the fragmentation of the organisation in which climate change and SEA are embedded has bearings on both normative and cultural–cognitive elements. This makes the assessment of synergies challenging. The evidence......This article takes its point of departure in two approaches to integrating climate change into Strategic Environmental Assessment (SEA): Mitigation and adaptation, and in the fact that these, as well as the synergies between them and other policy areas, are needed as part of an integrated...

  10. Engineering piezoresistivity using biaxially strained silicon

    DEFF Research Database (Denmark)

    Pedersen, Jesper Goor; Richter, Jacob; Brandbyge, Mads;

    2008-01-01

    We calculate the shear piezocoefficient of p-type silicon with grown-in biaxial strain using a 66 k·p method. We find a significant increase in the value of the shear piezocoefficient for compressive grown-in biaxial strain, while tensile strain decreases the piezocoefficient. The dependence...... of the piezocoefficient on temperature and dopant density is altered qualitatively for strained silicon. In particular, we find that a vanishing temperature coefficient may result for silicon with grown-in biaxial tensile strain. These results suggest that strained silicon may be used to engineer the iezoresistivity...

  11. Open Ocean Bilging, Arabian Sea

    Science.gov (United States)

    1989-01-01

    These dual oil slicks on the ocean surface are the result of tanker ships flushing their tanks (bilging) in the Arabian Sea (18.5N, 62.5E). These two ships flushed out their bilges, apparently contaminated with bunker oil, leaving oily residues on the ocean's surface. One wake, believed to have been done earlier than the other, has been broadened by the effects of surface winds and current.

  12. Chicken Porridge with Sea Cucumber

    Institute of Scientific and Technical Information of China (English)

    1994-01-01

    Chicken Porridge with Sea Cucumber is a dish created according to a well-known story about Jia Chang, who raised cocks during the Tang Dynasty. Cockfighting was popular among commonfolk during the Tang Dynasty. Emperor Xuanzong selected 5,000 cocks in Chang’an, and 500 children to feed them and train them to fight. Jia Chang was one of the children. Sent to the

  13. Coastal and Semi Enclosed Seas

    Science.gov (United States)

    2016-06-07

    Numerical model process and sensitivity studies are conducted to better understand the dynamics and thermodynamics of shallow and deep semi-enclosed seas...provision of law , no person shall be subject to a penalty for failing to comply with a collection of information if it does not display a currently...Navy Coastal Ocean Model (NCOM) code being developed in the ONR Ocean Model Development for COAMPS project. This model was first set up on the NPAC

  14. Strain and flow in the metamorphic core complex of Ios Island (Cyclades, Greece)

    Science.gov (United States)

    Mizera, Marcel; Behrmann, Jan H.

    2016-10-01

    We have analysed strain and flow kinematics in the footwall of the South Cyclades Shear Zone (SCSZ), an important tectonic boundary within the Attic-Cycladic Crystalline Complex exposed on Ios Island, Cyclades, Aegean Sea. Coarse-grained augen gneisses in the basement unit flooring the SCSZ and forming a metamorphic core complex are excellently suited to measure finite strain using the Fry method and estimate the vorticity number ( W k) of flow with the "blocked-object" method. The results show that Oligo-Miocene exhumation of the basement unit during extension brought approximately 70 % N-S crustal stretching and up to 40 % subvertical shortening in a plane strain environment ( k = 0.99). Linear down-section strain decrease constrains a zone of contact deformation of the SCSZ of about 1.5 km thick. Kinematic vorticity number estimates suggest little deviation from pure shear ( W k = 0.26). Finite strain and W k are not correlated, indicating that the Ios basement and the overlying cover units were stretched compatibly. While the SCSZ is a localized zone of high strain, net displacement, however, may be restricted to about ten kilometres. This has important repercussions on large-scale tectonic models for extension in the Aegean.

  15. Isolation of Dickeya dadantii strains from potato disease and biocontrol by their bacteriophages.

    Science.gov (United States)

    Soleimani-Delfan, Abbas; Etemadifar, Zahra; Emtiazi, Giti; Bouzari, Majid

    2015-01-01

    One of the most economically important bacterial pathogens of plants and plant products is Dickeya dadantii. This bacterium causes soft rot disease in tubers and other parts of the potato and other plants of the Solanaceae family. The application of restricted host range bacteriophages as biocontrol agents has recently gained widespread interest. This study purposed to isolate the infectious agent of the potato and evaluate its biocontrol by bacteriophages. Two phytopathogenic strains were isolated from infected potatoes, identified based on biochemical and 16S rRNA gene sequencing, and submitted to GenBank as D. dadantii strain pis3 (accession no. HQ423668) and D. dadantii strain sip4 (accession no. HQ423669). Their bacteriophages were isolated from Caspian Sea water by enriching the water filtrate with D. dadantii strains as hosts using spot or overlay methods. On the basis of morphotypes, the isolated bacteriophages were identified as members of the Myoviridae and Siphoviridae families and could inhibit the growth of antibiotic resistant D. dadantii strains in culture medium. Moreover, in Dickeya infected plants treated with bacteriophage, no disease progression was detected. No significant difference was seen between phage-treated and control plants. Thus, isolated bacteriophages can be suggested for the biocontrol of plant disease caused by Dickeya strains.

  16. Chemical munitions dumped at sea

    Science.gov (United States)

    Edwards, Margo; Bełdowski, Jacek

    2016-06-01

    Modern chemical warfare is a byproduct of the industrial revolution, which created factories capable of rapidly producing artillery shells that could be filled with toxic chemicals such as chlorine, phosgene and mustard agent. The trench warfare of World War I inaugurated extensive deployments of modern chemical weapons in 1915. Concomitantly, the need arose to dispose of damaged, captured or excess chemical munitions and their constituents. Whereas today chemical warfare agents (CWA) are destroyed via chemical neutralization processes or high-temperature incineration in tandem with environmental monitoring, in the early to middle 20th century the options for CWA disposal were limited to open-air burning, burial and disposal at sea. The latter option was identified as the least likely of the three to impact mankind, and sea dumping of chemical munitions commenced. Eventually, the potential impacts of sea dumping human waste were recognized, and in 1972 an international treaty, the Convention on the Prevention of Marine Pollution by Dumping of Wastes and Other Matter, was developed to protect the marine environment from pollution caused by the dumping of wastes and other matter into the ocean. By the time this treaty, referred to as the London Convention, was signed by a majority of nations, millions of tons of munitions were known to have been disposed throughout the world's oceans.

  17. Fracture Networks in Sea Ice

    Directory of Open Access Journals (Sweden)

    Jonas Nesland Vevatne

    2014-04-01

    Full Text Available Fracturing and refreezing of sea ice in the Kara sea are investigated using complex networkanalysis. By going to the dual network, where the fractures are nodes and their intersectionslinks, we gain access to topological features which are easy to measure and hence comparewith modeled networks. Resulting network reveal statistical properties of the fracturing process.The dual networks have a broad degree distribution, with a scale-free tail, high clusteringand efficiency. The degree-degree correlation profile shows disassortative behavior, indicatingpreferential growth. This implies that long, dominating fractures appear earlier than shorterfractures, and that the short fractures which are created later tend to connect to the longfractures.The knowledge of the fracturing process is used to construct growing fracture network (GFNmodel which provides insight into the generation of fracture networks. The GFN model isprimarily based on the observation that fractures in sea ice are likely to end when hitting existingfractures. Based on an investigation of which fractures survive over time, a simple model forrefreezing is also added to the GFN model, and the model is analyzed and compared to the realnetworks.

  18. Distributions of dimethylsulfide in the Bohai Sea and Yellow Sea of China

    Institute of Scientific and Technical Information of China (English)

    HU Min; TANG Xiao-yan; LI Jin-long; MA Qi-ju

    2003-01-01

    Dimethylsulfide(DMS) measurements in the surface seawater of China eastern coastline were conducted during March 9-10, 1993 in Bohai Sea along the cruise from Dalian to Tianjin and during September 24-25, 1994 in Yellow Sea along the cruise from Shanghai to Qingdao. On the cruise in Bohai Sea DMS concentrations varied from 0. 11 to 2.63 nmol/L with an average of 1.31 nmol/L, while DMS flux Bohai Sea. DMS concentrations and fluxes had a similar spatial trend both in Bohai Sea and Yellow Sea with the correlation coefficients of 0.75 and 0.64, respectively.

  19. Detection of sea, sec and seq genes in Staphylococcus aureus nasal sampling acquiring from healthy carrier

    Directory of Open Access Journals (Sweden)

    Mojtaba Saadati

    2009-09-01

    Full Text Available Background: Various assays have been used to identify of enterotoxins produced by Staphylococcus aureus and because of antigenic similarities among enterotoxins, serological assay may not always be practical. The aim of this study was to detect of S. aureus enterotoxins (SEA, SEC and SEQ genes by multiplex PCR assay. Methods: Of 150 strains obtained from nasal carriers, 95 S. aureus were confirmed by biochemical test. Multiplex PCR assay for the detection of genes encoding staphylococcal enterotoxins A, C and Q genes (sea, c and q S. aureus was used. The nuc gene, which encodes thermonuclease was used as a target DNA to identify S. aureus.Results: DNA amplification fragments for the staphylococcal nuclease gene (nuc was 397 bp, 552 bp for staphylococcal enterotoxin A gene (sea, 271 bp for staphylococcal enterotoxin C gene (sec and 122 bp for staphylococcal enterotoxin Q gene (seq. S. epidermidis used as negative control and did not yield a PCR product. Among the 95 healthy human isolates from nasal carriage, forty one isolates (43/1% were diagnosed as sea, sec or seq-positive. Twenty four (25/3% isolates were sea gene, nine (9/5% isolates were the sec gene and eight (8/4% isolates were the seq gene and 54 (56/8% of them were other se genes. Conclusion: Because Staphylococcus aureus was isolated in nasal healthy carrier, so the PCR assay could be useful in the routine direct detection of staphylococcal enterotoxin A, C and Q genes.

  20. Neoparamoeba branchiphila infections in moribund sea urchins Diadema aff. antillarum in Tenerife, Canary Islands, Spain.

    Science.gov (United States)

    Dyková, Iva; Lorenzo-Morales, Jacob; Kostka, Martin; Valladares, Basilio; Pecková, Hana

    2011-07-12

    A total of 109 sea urchins from 3 species collected in 2 localities off the coast of Tenerife Island, Spain, were examined for the presence of free-living amoebae in their coelomic fluid. Amoeba trophozoites were isolated exclusively from moribund individuals of long-spined sea urchins Diadema aff. antillarum (Philippi) (Echinoidea, Echinodermata) that manifested lesions related to sea urchin bald disease on their tests (16 out of 56 examined). No amoebae were detected in Arbacia lixula (L.) and Paracentrotus lividus (Lamarck). From the former sea urchin species, 8 strains, established from 10 primary isolates, were identified as Neoparamoeba branchiphila Dyková et al., 2005 using morphological and molecular methods. Results of this study (limited to the screening for free-living amoebae) together with data on agents of sea urchin mortalities reported to date justify the hypothesis that free-living amoebae play an opportunistic role in D. aff. antillarum mortality. The enlargement of the dataset of SSU rDNA sequences brought new insight into the phylogeny of Neoparamoeba species.